Your job contains 1 sequence.
>psy16692
MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH
CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA
CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN
EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD
SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV
LSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSF
LQVENDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTVLGDCVPKSWLYLET
VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL
ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAFWIVVFGSL
IGICGLGHLDFYRELLLSISNFCDRLFLVGNSVLLVLCVLMFYPLSHIHRFRTPGPIVLM
HGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQFYVLQRD
RTFELVGITVLLLVVPYPLRMLATSLASLILFTAMRNSSVDVFPDFPIVAAYPKNGINHY
GITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILL
QDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLL
QQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGR
KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI
QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND
TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE
DQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNY
TVRFPARTK
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16692
(1149 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 524 7.8e-111 4
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 449 9.6e-86 4
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 444 3.6e-85 4
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 432 1.8e-84 4
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 438 3.7e-83 4
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 438 3.7e-83 4
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 432 7.5e-82 4
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 431 7.6e-82 4
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 428 2.1e-81 4
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 426 5.8e-81 4
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 416 8.7e-80 4
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 455 1.1e-75 2
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 405 7.6e-75 3
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 455 1.4e-73 3
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 451 6.4e-73 2
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 447 1.4e-72 2
UNIPROTKB|J9NZT9 - symbol:HERC3 "Uncharacterized protein"... 362 2.8e-63 4
UNIPROTKB|F1NCH2 - symbol:HERC4 "Uncharacterized protein"... 403 7.6e-49 3
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 262 3.0e-41 4
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 262 3.0e-41 4
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 265 1.9e-40 3
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 292 1.0e-39 2
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 269 1.7e-38 4
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 270 1.7e-38 3
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 268 1.4e-36 2
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 259 3.2e-36 3
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 255 2.8e-35 3
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 222 2.0e-34 3
UNIPROTKB|H0Y8G9 - symbol:HERC3 "Probable E3 ubiquitin-pr... 368 1.5e-32 1
UNIPROTKB|F5GWU0 - symbol:HERC3 "Probable E3 ubiquitin-pr... 360 5.7e-32 2
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 253 4.1e-31 4
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 210 2.0e-30 3
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 253 5.6e-30 3
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 260 6.2e-30 4
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 195 1.8e-29 3
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 290 3.1e-24 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 288 2.5e-23 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 255 2.6e-17 3
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 270 7.2e-17 2
UNIPROTKB|I3LVA1 - symbol:HERC6 "Uncharacterized protein"... 236 8.8e-17 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 259 3.5e-16 2
UNIPROTKB|E9PBL0 - symbol:HERC5 "E3 ISG15--protein ligase... 215 4.4e-16 3
UNIPROTKB|I3LA49 - symbol:HERC5 "Uncharacterized protein"... 229 5.2e-16 1
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 231 8.7e-16 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 237 1.0e-15 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 256 1.5e-15 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 256 1.5e-15 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 256 1.5e-15 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 249 1.5e-15 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 242 4.2e-15 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 223 6.0e-15 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 249 6.0e-15 3
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 249 6.2e-15 3
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 158 7.1e-15 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 249 1.5e-14 3
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 249 1.5e-14 3
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 249 1.5e-14 3
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 168 2.9e-14 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 215 4.4e-14 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 220 6.0e-14 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 249 7.5e-14 3
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 231 7.5e-14 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 249 7.8e-14 3
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 249 7.9e-14 3
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 244 1.3e-13 3
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 244 1.3e-13 3
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 228 1.4e-13 3
UNIPROTKB|J9NVI9 - symbol:J9NVI9 "Uncharacterized protein... 209 2.4e-13 1
POMBASE|SPBP8B7.27 - symbol:mug30 "ubiquitin-protein liga... 213 2.6e-13 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 237 2.7e-13 3
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 211 3.6e-13 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 223 6.3e-13 3
UNIPROTKB|F1MA03 - symbol:F1MA03 "Uncharacterized protein... 206 1.3e-12 1
UNIPROTKB|I3LHR3 - symbol:LOC100156944 "Uncharacterized p... 206 1.4e-12 1
ZFIN|ZDB-GENE-041114-190 - symbol:ube3a "ubiquitin protei... 206 1.6e-12 1
UNIPROTKB|F1RMH6 - symbol:RCCD1 "Uncharacterized protein"... 199 1.8e-12 1
RGD|1306361 - symbol:Ube3a "ubiquitin protein ligase E3A"... 205 2.3e-12 1
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 142 2.5e-12 2
UNIPROTKB|F1SNS1 - symbol:UBE3A "Uncharacterized protein"... 203 3.4e-12 1
UNIPROTKB|F1PBV3 - symbol:UBE3A "Uncharacterized protein"... 203 3.5e-12 1
UNIPROTKB|Q05086 - symbol:UBE3A "Ubiquitin-protein ligase... 203 3.6e-12 1
UNIPROTKB|A4IFN7 - symbol:UBE3A "Uncharacterized protein"... 203 3.6e-12 1
UNIPROTKB|F1NER6 - symbol:UBE3A "Uncharacterized protein"... 203 3.6e-12 1
UNIPROTKB|F1PT35 - symbol:HECTD2 "Uncharacterized protein... 201 3.6e-12 1
MGI|MGI:2442663 - symbol:Hectd2 "HECT domain containing 2... 202 3.8e-12 1
UNIPROTKB|Q6NVK6 - symbol:ube3a "Ubiquitin protein ligase... 202 4.4e-12 1
MGI|MGI:2444156 - symbol:Rccd1 "RCC1 domain containing 1"... 195 4.8e-12 1
UNIPROTKB|F1NGR4 - symbol:HECTD2 "Uncharacterized protein... 201 4.9e-12 1
MGI|MGI:105098 - symbol:Ube3a "ubiquitin protein ligase E... 201 6.0e-12 1
UNIPROTKB|F1N7A0 - symbol:HECTD2 "Uncharacterized protein... 199 8.0e-12 1
ASPGD|ASPL0000060082 - symbol:hulB species:162425 "Emeric... 217 9.1e-12 3
UNIPROTKB|Q5BG86 - symbol:AN0444.2 "Putative uncharacteri... 217 1.2e-11 3
CGD|CAL0002471 - symbol:orf19.5892 species:5476 "Candida ... 211 1.4e-11 3
UNIPROTKB|Q873C0 - symbol:B24N11.040 "Related to ubiquiti... 221 1.8e-11 3
UNIPROTKB|E7ERR3 - symbol:HECTD2 "Probable E3 ubiquitin-p... 200 1.9e-11 2
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 193 1.9e-11 1
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 190 2.1e-11 1
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 190 2.1e-11 1
UNIPROTKB|H0YEL8 - symbol:SERGEF "Secretion-regulating gu... 139 2.5e-11 2
UNIPROTKB|A8I1Z0 - symbol:CHLREDRAFT_126603 "Predicted pr... 187 3.0e-11 1
WARNING: Descriptions of 139 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 524 (189.5 bits), Expect = 7.8e-111, Sum P(4) = 7.8e-111
Identities = 143/391 (36%), Positives = 210/391 (53%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLAL+D G+V +WG + GQLG + DK+ +PK V+ L + +VVQ G +H L
Sbjct: 98 GSRHSLALSDWGQVLSWGDNDCGQLG-HATDKEIVQLPKVVRQLVTKTVVQIACGNNHSL 156
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
LTS CGE+++WG + +GQLG+ S + + + P R+ L + +
Sbjct: 157 ALTS------------CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204
Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
G +H +++ SG V + N CG S P+Q GV+ D +
Sbjct: 205 CGGNHSFLISKSGAVFGWGRNN-CGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSV 263
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
L + G ++T G YGQ+G S+ + P+ V L+ I +ACG H+ L S
Sbjct: 264 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQVACGNRHTLALVPS 320
Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKK 281
R+YAFG+GS+ QL S KS+ PQ++ GPW++ S A+ DS VS LV+++
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSL-MLPQVVIGPWVSPSGSALLQSNDSQVS----LVIRQ 375
Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
I+SGGD SIVT T D V +DFR NP +QIL + E K+C + + L+SD D
Sbjct: 376 IFSGGDQSIVTTTLFVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQCKQGLQSD----MD 431
Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCN 372
LL +E +F S C NGSFL +++D HF C+
Sbjct: 432 LLSSIELIFRSQACWNGSFL-LDHDRHFGCS 461
Score = 469 (170.2 bits), Expect = 7.8e-111, Sum P(4) = 7.8e-111
Identities = 96/192 (50%), Positives = 130/192 (67%)
Query: 901 KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQR 959
++ Y FY PDL+ D++ +Y +WI + RDF +CNY FIFD AKT LL+ DQ
Sbjct: 626 RLNYQIFYWPDLSDYADVQQEYVKWIMA---DTARDFNICNYSFIFDQSAKTALLQADQA 682
Query: 960 IQMEHAM-NQTNFYLFLQTFN-PHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLK 1017
+QM AM N F FN ++Q++ + V+R+N+V+D++REL Y+ +D KKPLK
Sbjct: 683 LQMHSAMANAATMQAF-SFFNYGMPISQFIVLNVTRENLVQDSLRELQHYSQSDLKKPLK 741
Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
+ KF GEEAEDAGGVR+EF MLLLK++LDPKYGMFKEYE++R +WF++
Sbjct: 742 I------------KFHGEEAEDAGGVRKEFFMLLLKDLLDPKYGMFKEYEQSRLLWFADL 789
Query: 1078 TFEDQNMYFLIG 1089
TFE +NMYFLIG
Sbjct: 790 TFETENMYFLIG 801
Score = 306 (112.8 bits), Expect = 1.3e-92, Sum P(3) = 1.3e-92
Identities = 56/95 (58%), Positives = 76/95 (80%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ EYE++R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLAL+KK+L +P+
Sbjct: 772 YGMFKEYEQSRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLGKPV 831
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L DL+ LSP A S+Q +LDY+ D ++VF +TF
Sbjct: 832 DLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTF 866
Score = 278 (102.9 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 79/244 (32%), Positives = 122/244 (50%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
E++ WG +HGQLGL + + P ++ +V Q G+ H L LT+T
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTAT------- 58
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
G+V+ G + + QLG + K+ IP+ L ++Q C G H L L+ G
Sbjct: 59 -----GKVYACGSNDYSQLGHDLPTKRPLLIPE----LQDYVIIQICCGSRHSLALSDWG 109
Query: 135 VVTCTHKEN----GCGSD------PS---QGVQSNLVQ----DSHTTITSLNSPGELYTW 177
V + G +D P Q V +VQ ++H+ +L S GELY+W
Sbjct: 110 QVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSL--ALTSCGELYSW 167
Query: 178 GNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
G+N YGQ+G+N+ N T P R+ +L+ +P+A IACG NHSF++SKS ++ +G +
Sbjct: 168 GSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS-GAVFGWGRNN 226
Query: 236 AVQL 239
QL
Sbjct: 227 CGQL 230
Score = 229 (85.7 bits), Expect = 7.8e-111, Sum P(4) = 7.8e-111
Identities = 44/113 (38%), Positives = 73/113 (64%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
+E +F S C NGSFL +++D HF C+ ++ G+D++ Q +D + +E ES+R ++ N
Sbjct: 436 IELIFRSQACWNGSFL-LDHDRHFGCSVRDHGLDLKAAQLAFDNLRAVENESIRQVIWDN 494
Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ LV SL +P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 495 IT-----KELVGSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAI 542
Score = 195 (73.7 bits), Expect = 8.4e-76, Sum P(4) = 8.4e-76
Identities = 67/229 (29%), Positives = 112/229 (48%)
Query: 81 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
E++ WG +HGQLGL + + P ++ +V Q G+ H L LT++G V C
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 140 HKE-NGCGSD-PSQG------VQSN-LVQ---DSHTTITSLNSPGELYTWGNNEYGQMGI 187
+ + G D P++ +Q ++Q S ++ +L+ G++ +WG+N+ GQ+G
Sbjct: 66 SNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSL-ALSDWGQVLSWGDNDCGQLGH 124
Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
V P+ V LV + IACG NHS L+ S LY++G QL V+
Sbjct: 125 ATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT-SCGELYSWGSNIYGQL----GVNS 179
Query: 248 TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
L H + P+ +T +L+ G+ + I GG+HS + ++KS
Sbjct: 180 PNDLTHCNY---PLRLT----TLL----GIPLAAIACGGNHSFL-ISKS 216
Score = 179 (68.1 bits), Expect = 1.8e-80, Sum P(4) = 1.8e-80
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 1100 KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MFKEYE++R +WF++ TFE +NMYFLIG LCGLAIYN+T+
Sbjct: 771 KYGMFKEYEQSRLLWFADLTFETENMYFLIGVLCGLAIYNFTI 813
Score = 108 (43.1 bits), Expect = 9.9e-67, Sum P(4) = 9.9e-67
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+L L G+V+ G + + QLG + K+ IP+ L ++Q C G H
Sbjct: 51 HTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPE----LQDYVIIQICCGSRH----- 101
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLG 94
SLAL+D G+V +WG + GQLG
Sbjct: 102 -------SLALSDWGQVLSWGDNDCGQLG 123
Score = 55 (24.4 bits), Expect = 7.8e-111, Sum P(4) = 7.8e-111
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 816 WYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVD-STNGD-----ITFNRKLSFCLQVLQK 868
W +YFE L+ F +I+++ + G+ S + + + +N +L L++++
Sbjct: 556 WLAQTPAEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKT 615
Query: 869 LNSLNNE 875
L +NNE
Sbjct: 616 LCQINNE 622
Score = 48 (22.0 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 338 LDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSLI-NWFMKLHFSIFG 396
+ +D+ ET L P NG+ + V + N ++F + + + N ++LH++ F
Sbjct: 868 ISRDVFGEAETKCLKP---NGNEIAVTLE-----NRQEFVDLYVDFVFNKSVELHYNAFH 919
Query: 397 QGFGCVC 403
+GF VC
Sbjct: 920 KGFMKVC 926
Score = 38 (18.4 bits), Expect = 1.1e-78, Sum P(4) = 1.1e-78
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 717 INHYGITEYEETRSIWFSEDTFEDQNMC 744
++ Y + E + W DT D N+C
Sbjct: 637 LSDYADVQQEYVK--WIMADTARDFNIC 662
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 449 (163.1 bits), Expect = 9.6e-86, Sum P(4) = 9.6e-86
Identities = 123/394 (31%), Positives = 200/394 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+LALND G+V+ WG D+ GQLGL+ +++ + +P+ +K L+ + +VQ GY
Sbjct: 95 HTLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVACGY------- 146
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+HSLAL+ EVF WG + +GQLGL D + Q+ P+ +K L + +Q AG +
Sbjct: 147 -----YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 126 HCLVLTSSGVVTC--THKENGCG-SDPSQGVQSNLVQ-------------DSHTTITSLN 169
H VLT SG + +K G +D + NL++ + HT +L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA--ALT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G YGQ+G +NS + P++V L+ + +ACG H+ S R+Y
Sbjct: 259 KEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317
Query: 230 AFGIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
+FG+G QL + S K+P + G W + +D + VK+I+SGGD
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVKGNWFS--YNGQCPQD--IGSEDYFCVKRIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
S + + DDFR +P+ QI VN E L ++ + ++ ++
Sbjct: 374 SFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-EAL--IQKWLSYPSG--RFPVEIANEIDG 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
F S GC+NGSFL + ND+H+ ++ FS + ++
Sbjct: 429 TFSSSGCLNGSFLAISNDDHYRTGTR-FSGVDMN 461
Score = 376 (137.4 bits), Expect = 9.6e-86, Sum P(4) = 9.6e-86
Identities = 85/204 (41%), Positives = 126/204 (61%)
Query: 899 GRKVAYTAFYMPDLATVCDIRIDYFRWISGRP------NGSTR--DF---LCNYPFIFDA 947
G+ + Y FY+ ++ + DIR DY W+ + +G T D +C YPF+FDA
Sbjct: 608 GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVDVSHGVTELADIPVTICTYPFVFDA 667
Query: 948 KAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQYLEVEVSRDNIVEDTIRELA 1005
+AKTTLL+ D +QM+ A++Q + F P ++N L + V R+NIV D + L
Sbjct: 668 QAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLR 727
Query: 1006 QYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKE 1065
+ D+KKPLKV I++ GE+A DAGGVR+EF +L+++E+LDPKYGMF+
Sbjct: 728 KTKNIDYKKPLKV-----IFV-------GEDAVDAGGVRKEFFLLIMRELLDPKYGMFRY 775
Query: 1066 YEETRSIWFSEDTFEDQNMYFLIG 1089
YE++R IWFS+ TFED +++ LIG
Sbjct: 776 YEDSRLIWFSDKTFEDSDLFHLIG 799
Score = 277 (102.6 bits), Expect = 1.7e-72, Sum P(3) = 1.7e-72
Identities = 52/101 (51%), Positives = 72/101 (71%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 864
Score = 232 (86.7 bits), Expect = 1.8e-62, Sum P(4) = 1.8e-62
Identities = 90/320 (28%), Positives = 151/320 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD---KKSQSIPKRVKGLASVSVVQ 119
+LALND G+V+ WG D+ GQLGL+ ++ + ++I K + + V V
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI-KSLSDIQIVQV-- 142
Query: 120 ACAGYSHCLVLTSSGVVTC---THKENGCGSDPSQGVQSNLVQD-------------SHT 163
AC Y + +S V + + G G D + L++ +H+
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ +L+ G ++ WG N++GQ+G+N+ N P ++SL + I I CG +H+ L+K
Sbjct: 203 FVLTLS--GAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLRSQKIVYICCGEDHTAALTK 259
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPW--IASPVAMTAGEDSLVSHSGGLVVK 280
++ FG G QL + H+ P+ + I + VA S S G
Sbjct: 260 E-GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG---- 314
Query: 281 KIYS---GGDHSIVTVTKSS 297
+IYS GG+ + T + S+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSN 334
Score = 216 (81.1 bits), Expect = 8.2e-61, Sum P(4) = 8.2e-61
Identities = 79/277 (28%), Positives = 126/277 (45%)
Query: 19 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
WG ++GQLGL D++ P+R + V G C GL H++ + D
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDV--G---C-------GLRHTVFVLD 51
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
G V+T G + GQLG E + KK P++V L + ++V G +H L L G V
Sbjct: 52 DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYA 107
Query: 139 THKEN----GC-GSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNNEYG 183
++ G GS+ V N+ S I +L+ E++ WG N+YG
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SP 242
Q+G+ T PQ ++SL+ +P +A G HSFVL+ S ++ +G QL +
Sbjct: 168 QLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLND 226
Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 165 (63.1 bits), Expect = 1.0e-63, Sum P(4) = 1.0e-63
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWF-SEDTFED----QNMYFLIGKEYVPCTY 1097
VRRE ++ E+L + +Y++ + F ED + + + LI +E +
Sbjct: 713 VRRENIVGDAMEVLRKTKNI--DYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLD--- 767
Query: 1098 ISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MF+ YE++R IWFS+ TFED +++ LIG +CGLAIYN+T+
Sbjct: 768 -PKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTI 811
Score = 147 (56.8 bits), Expect = 9.6e-86, Sum P(4) = 9.6e-86
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL + ND+H+ ++ GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
A L + L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 ASLEKN--LIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533
Score = 73 (30.8 bits), Expect = 9.6e-86, Sum P(4) = 9.6e-86
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQ--QPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
NW+ ++ F +++ +FK+ +++LL+ + G+ S FN L L+VL+ L+ +
Sbjct: 546 NWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERR--IFNSFLHTALKVLEILHRV 603
Query: 873 NNET 876
N +T
Sbjct: 604 NEKT 607
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 444 (161.4 bits), Expect = 3.6e-85, Sum P(4) = 3.6e-85
Identities = 124/394 (31%), Positives = 199/394 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+LALND G+V+ WG D+ GQLGL+ +++ + +P+ +K L+ + +VQ GY
Sbjct: 95 HTLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVACGY------- 146
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+HSLAL+ EVF WG + +GQLGL + + Q+ P+ +K L + +Q AG +
Sbjct: 147 -----YHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 126 HCLVLTSSGVVTC--THKENGCG-SDPSQGVQSNLVQ-------------DSHTTITSLN 169
H VLT SG + +K G +D + NL++ + HT +L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA--ALT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G YGQ+G +NS + P++V L+ + IACG H+ S R+Y
Sbjct: 259 KEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Query: 230 AFGIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
+FG+G QL + S K+P + G W + +D + VK+I+SGGD
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVKGNWFS--YNGQCPQD--IGSEDYFCVKRIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
S + DDFR +P+ QI VN E L ++ + ++ ++
Sbjct: 374 SFSHYSSPQSCGPPDDFRRSDPSKQIWTVN-EAL--IQKWLSYPSG--RFPVEIANEIDG 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
F S GC+NGSFL V ND+H+ ++ FS + ++
Sbjct: 429 TFSSSGCLNGSFLAVSNDDHYRTGTR-FSGVDMN 461
Score = 376 (137.4 bits), Expect = 3.6e-85, Sum P(4) = 3.6e-85
Identities = 85/204 (41%), Positives = 126/204 (61%)
Query: 899 GRKVAYTAFYMPDLATVCDIRIDYFRWISGRP------NGSTR--DF---LCNYPFIFDA 947
G+ + Y FY+ ++ + DIR DY W+ + +G T D +C YPF+FDA
Sbjct: 608 GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVDVSHGITELADIPVTICTYPFVFDA 667
Query: 948 KAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQYLEVEVSRDNIVEDTIRELA 1005
+AKTTLL+ D +QM+ A++Q + F P ++N L + V R+NIV D + L
Sbjct: 668 QAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLR 727
Query: 1006 QYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKE 1065
+ D+KKPLKV I++ GE+A DAGGVR+EF +L+++E+LDPKYGMF+
Sbjct: 728 KTKNIDYKKPLKV-----IFV-------GEDAVDAGGVRKEFFLLIMRELLDPKYGMFRY 775
Query: 1066 YEETRSIWFSEDTFEDQNMYFLIG 1089
YE++R IWFS+ TFED +++ LIG
Sbjct: 776 YEDSRLIWFSDKTFEDSDLFHLIG 799
Score = 276 (102.2 bits), Expect = 6.2e-72, Sum P(3) = 6.2e-72
Identities = 52/101 (51%), Positives = 72/101 (71%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864
Score = 228 (85.3 bits), Expect = 4.6e-62, Sum P(4) = 4.6e-62
Identities = 79/264 (29%), Positives = 131/264 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD---KKSQSIPKRVKGLASVSVVQ 119
+LALND G+V+ WG D+ GQLGL+ ++ + ++I K + + V V
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNI-KSLSDIQIVQV-- 142
Query: 120 ACAGYSHCLVLTSSGVVTCTHKENG-------CGSDPS-QGVQSNL----VQ----DSHT 163
AC Y + +S V + G C S Q ++S L +Q +H+
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ +L+ G ++ WG N++GQ+G+N+ N P ++SL + I I CG +H+ L+K
Sbjct: 203 FVLTLS--GAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLRSQKIVYICCGEDHTAALTK 259
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHK 247
++ FG G QL + H+
Sbjct: 260 E-GGVFTFGAGGYGQLGHNSTSHE 282
Score = 212 (79.7 bits), Expect = 2.1e-60, Sum P(4) = 2.1e-60
Identities = 78/277 (28%), Positives = 126/277 (45%)
Query: 19 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
WG ++GQLGL D++ P++ + V G C GL H++ + D
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDV--G---C-------GLRHTVFVLD 51
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
G V+T G + GQLG E + KK P++V L + ++V G +H L L G V
Sbjct: 52 DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYA 107
Query: 139 THKEN----GC-GSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNNEYG 183
++ G GS+ V N+ S I +L+ E++ WG N+YG
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SP 242
Q+G+ T PQ ++SL+ +P +A G HSFVL+ S ++ +G QL +
Sbjct: 168 QLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLND 226
Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 165 (63.1 bits), Expect = 3.7e-63, Sum P(4) = 3.7e-63
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWF-SEDTFED----QNMYFLIGKEYVPCTY 1097
VRRE ++ E+L + +Y++ + F ED + + + LI +E +
Sbjct: 713 VRRENIVGDAMEVLRKTKNI--DYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLD--- 767
Query: 1098 ISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MF+ YE++R IWFS+ TFED +++ LIG +CGLAIYN+T+
Sbjct: 768 -PKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTI 811
Score = 148 (57.2 bits), Expect = 3.6e-85, Sum P(4) = 3.6e-85
Identities = 36/112 (32%), Positives = 58/112 (51%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL V ND+H+ ++ GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHRLIQPDHPQISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
A L + L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 ASLEKN--LIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533
Score = 72 (30.4 bits), Expect = 3.6e-85, Sum P(4) = 3.6e-85
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQ--QPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
NW+ ++ F +++ +FK+ +++LL+ + G+ S FN L L+VL+ L+ +
Sbjct: 546 NWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERR--IFNSFLHTALKVLEILHRV 603
Query: 873 NNET 876
N T
Sbjct: 604 NERT 607
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 432 (157.1 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 125/396 (31%), Positives = 193/396 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+LALND G+V+ WG T GQLGL ++ + +P+ +K L+ + +VQ GY
Sbjct: 95 HTLALNDKGQVYAWGLATDGQLGLPGTEECIR-VPRNIKSLSEIQIVQVACGY------- 146
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+HSLAL+ EVF+WG + +GQLGL + K Q+ P +K L + Q AG +
Sbjct: 147 -----YHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ------------DSHTTITSLN 169
H VLT SG + + G D + V + L + HT +L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTA--ALT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G YGQ+G +NS + P++V L+ + I CG H+ S R+Y
Sbjct: 259 KEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIY 317
Query: 230 AFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
+FG+G QL + S K+P + G W+ DS + VK+I+SGGD
Sbjct: 318 SFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADSEQYYC----VKRIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET--LDQDLLLYL 346
S + V DDFR + QI VN E +++L + + L ++ +
Sbjct: 374 SFAHYFYPQNMVPPDDFRYPDLLKQIWTVN-------ETFIQRLLTFPSGRLPVEIANEI 426
Query: 347 ETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
+ F S GC+NGSFL + ND+H+ S +FS + ++
Sbjct: 427 DGTFSSAGCLNGSFLALSNDDHYK-TSVRFSGVDMN 461
Score = 403 (146.9 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 86/196 (43%), Positives = 123/196 (62%)
Query: 899 GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF---LCNYPFIFDAKAKTTLLE 955
G+ + Y FY+ ++ + DIR DY W+ + G D +C YPF+FDA+AKTTLL+
Sbjct: 607 GQVIQYDRFYIHEIQDLIDIRNDYVNWVQQQVFGMLTDMPVTICTYPFVFDAQAKTTLLQ 666
Query: 956 MDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFK 1013
D +QM+ A++Q + F P ++N L + V RDNIV D + L + D+K
Sbjct: 667 TDAVMQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGDAVEVLRKTKNVDYK 726
Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
KPLKV I++ GEEA D GGVR+EF +L+++E+LDPKYGMF+ YEE+R IW
Sbjct: 727 KPLKV-----IFV-------GEEAVDVGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIW 774
Query: 1074 FSEDTFEDQNMYFLIG 1089
FS+ TFED +++ LIG
Sbjct: 775 FSDKTFEDSDLFHLIG 790
Score = 277 (102.6 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 52/101 (51%), Positives = 73/101 (72%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YEE+R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 759 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKK 814
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L++ L DLK+L P + + +Q +LDY E D+E+ F + F
Sbjct: 815 LLNKKPSLDDLKELMPDVGRGMQQLLDYPEDDIEEAFCLNF 855
Score = 213 (80.0 bits), Expect = 2.2e-61, Sum P(4) = 2.2e-61
Identities = 87/320 (27%), Positives = 147/320 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E A K+ P+ V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL---ESADKKSQSIPKRVKGLASVSVVQ 119
+LALND G+V+ WG T GQLGL E + ++I K + + V V
Sbjct: 96 ----------TLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI-KSLSEIQIVQV-- 142
Query: 120 ACAGYSHCLVLTSSGVVTC---THKENGCGSDPSQGVQSNLVQD-------------SHT 163
AC Y + S V + + + G G + + ++++ +H+
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHS 202
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ +L+ G ++ WG N++GQ+G+N+ N P ++SL + I CG +H+ L+K
Sbjct: 203 FVLTLS--GAIFGWGRNKFGQLGLNDDNDRYV-PTLLKSLRTQKVVHICCGEDHTAALTK 259
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK-- 280
++ FG G QL + H+ P+ + + +T G H+ V
Sbjct: 260 E-GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQ----HTTAFVPSSG 314
Query: 281 KIYS---GGDHSIVTVTKSS 297
+IYS GG+ + T T S+
Sbjct: 315 RIYSFGLGGNGQLGTGTTSN 334
Score = 205 (77.2 bits), Expect = 1.5e-60, Sum P(4) = 1.5e-60
Identities = 77/277 (27%), Positives = 123/277 (44%)
Query: 19 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
WG + GQLGL D++ P++ + + G C GL H++ + D
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDV--G---C-------GLRHTVFVLD 51
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-- 136
G V+T G + GQLG E A K+ P+ V L + ++V G +H L L G V
Sbjct: 52 DGTVYTCGCNDLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYA 107
Query: 137 --TCTHKENGC-GSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNNEYG 183
T + G G++ V N+ S I +L+ E+++WG N+YG
Sbjct: 108 WGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYG 167
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SP 242
Q+G+ P ++SL+ +P A IA G HSFVL+ S ++ +G QL +
Sbjct: 168 QLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLND 226
Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
+ P L+ V + GED + ++ GG+
Sbjct: 227 DNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263
Score = 163 (62.4 bits), Expect = 1.9e-59, Sum P(4) = 1.9e-59
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 1100 KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MF+ YEE+R IWFS+ TFED +++ LIG +CGLAIYN+T+
Sbjct: 760 KYGMFRYYEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTI 802
Score = 146 (56.5 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL + ND+H+ + + GVDM + + + + + + V+
Sbjct: 426 IDGTFSSAGCLNGSFLALSNDDHYKTSVRFSGVDMNAARLLFHKLIQPDHAHISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
A L + L+ L ++ PD EALR++LTLP + L +PF A+
Sbjct: 484 ASLEKN--LIPKLSSSLPDVEALRLYLTLPECPLMSDANNFTTLAIPFGTAI 533
Score = 53 (23.7 bits), Expect = 1.8e-84, Sum P(4) = 1.8e-84
Identities = 13/59 (22%), Positives = 32/59 (54%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQ--QPGVVDSTNGDITFNRKLSF-CLQVLQKLN 870
NW+ ++ F +++ ++K +++LL+ + G+ S T +F L++L ++N
Sbjct: 546 NWWSVLEPPLFLKIVELYKDVVVHLLKLYKIGIPPSERRIFTNFLHTAFRVLEILHRVN 604
Score = 37 (18.1 bits), Expect = 4.7e-50, Sum P(4) = 4.7e-50
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTL 750
YP+N + + + IW +TF + + F G L
Sbjct: 380 YPQNMVPPDDFRYPDLLKQIWTVNETFIQRLLTFPSGRL 418
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 438 (159.2 bits), Expect = 3.7e-83, Sum P(4) = 3.7e-83
Identities = 124/387 (32%), Positives = 195/387 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL+D G+VF+WG + GQLGL + + + ++P+ +K L +++Q C
Sbjct: 95 HSVALSDQGQVFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQIS-----C---- 144
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G WH LAL G+ FTWG +++GQLGL + SQ+ P+RVK L + + Q AG +
Sbjct: 145 ---GNWHCLALAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLAQVAAGGA 200
Query: 126 HCLVLTSSGVVTCTHKENGCG----SD------P-------SQGVQSNLVQDSHTTITSL 168
H L+ SG V K N G SD P SQ V + HT + L
Sbjct: 201 HSFALSLSGAVFGWGK-NSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAV--L 257
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G ++T+G GQ+G ++ N V P+RV L+ ++ IACG +H+ S +
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMI 316
Query: 229 YAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
YAFG G+ QL + + + K P + G W A ++ D+ H +VK I+SGGD
Sbjct: 317 YAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYH----IVKHIFSGGD 372
Query: 288 HSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLE 347
+ V +K + + +DDFR +N +N E + +++ + S +++ +
Sbjct: 373 QTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSSNSVNN-----VV 427
Query: 348 TVFLSPGCMNGSFLQVENDEHFSCNSK 374
+ S C NGSFL+ + DEHF + K
Sbjct: 428 QILSSAACWNGSFLEKKIDEHFKTSPK 454
Score = 357 (130.7 bits), Expect = 3.7e-83, Sum P(4) = 3.7e-83
Identities = 84/201 (41%), Positives = 119/201 (59%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRWI---SG---RPNGSTRDF--LCNYPFIFDAKAKT 951
+ + Y FY+P+++++ DI+ DY W +G RP+ +D LC+YPFIFDA+AKT
Sbjct: 605 KHIEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPS-IMQDAVTLCSYPFIFDAQAKT 663
Query: 952 TLLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYT 1008
+L+ D +QM+ A+N N L T P +L + V R N+V D +REL+ ++
Sbjct: 664 KMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELSIHS 723
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
D KKPLKV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y E
Sbjct: 724 DIDLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPE 771
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+ +WFS+ F + N + LIG
Sbjct: 772 SNLLWFSDTCFVEHNWFHLIG 792
Score = 256 (95.2 bits), Expect = 4.0e-70, Sum P(3) = 4.0e-70
Identities = 48/95 (50%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y E+ +WFS+ F + N LIG +CGLAIYN+T++++ FPLALYKK+L+
Sbjct: 763 YGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKP 822
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ +LDY D+E+ F + F
Sbjct: 823 CLEDLKELSPTEGRSLQQLLDYPGEDIEETFCLNF 857
Score = 230 (86.0 bits), Expect = 8.7e-61, Sum P(4) = 8.7e-61
Identities = 72/212 (33%), Positives = 101/212 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LAL G+ FTWG +++GQLGL + SQ+ P+RVK L + + Q AG +H
Sbjct: 145 GNWHCLALAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLAQVAAGGAH-- 201
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL+ G VF WG ++ GQLGL +D++ + P VK L S VV
Sbjct: 202 ----------SFALSLSGAVFGWGKNSSGQLGL--SDERDRESPCHVKLLRSQKVVYISC 249
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPSQGVQ------SNLVQDSHTTIT 166
G H VLT SG V T CG +P + ++ S + H T+
Sbjct: 250 GEEHTAVLTKSGGVF-TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLA 308
Query: 167 SLNSPGELYTWGNNEYGQMGINNS-NTTVTKP 197
+ S G +Y +G GQ+G ++ N P
Sbjct: 309 FVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSP 340
Score = 216 (81.1 bits), Expect = 2.5e-59, Sum P(4) = 2.5e-59
Identities = 70/226 (30%), Positives = 111/226 (49%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
HS+ L + GEV+T G +T GQLG ES K P+ + LA +V G SH + L+
Sbjct: 45 HSVFLLEDGEVYTCGLNTKGQLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALS 100
Query: 132 SSGVVTC--THKENGCGSDPSQGV-----------QSNLVQDS--HTTITSLNSPGELYT 176
G V + G + Q ++Q S + +L + G+ +T
Sbjct: 101 DQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFT 160
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
WG N YGQ+G+ + PQRV+SL +P+A +A G HSF LS S ++ +G S+
Sbjct: 161 WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS-GAVFGWGKNSS 219
Query: 237 VQLD-SPKSVHKTPQLIHGPWIASP--VAMTAGED--SLVSHSGGL 277
QL S + ++P H + S V ++ GE+ ++++ SGG+
Sbjct: 220 GQLGLSDERDRESP--CHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263
Score = 210 (79.0 bits), Expect = 1.0e-58, Sum P(4) = 1.0e-58
Identities = 76/252 (30%), Positives = 121/252 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+ L + GEV+T G +T GQLG ES K P+ + LA +V G SH
Sbjct: 45 HSVFLLEDGEVYTCGLNTKGQLGHESEGSK----PEPIGALAGQHIVHVACGESH----- 95
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ--SIPKRVKGLASVSVVQACAG 123
S+AL+D G+VF+WG + GQLGL + + + K++ + + +C
Sbjct: 96 -------SVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI--SCGN 146
Query: 124 YSHCLVLTSSGVVTC---THKENGCGSD-PSQG----VQS----NLVQ----DSHTTITS 167
+ + T ++ + G G + PSQ V+S L Q +H+ S
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L+ G ++ WG N GQ+G+++ + P V+ L + + I+CG H+ VL+KS
Sbjct: 207 LS--GAVFGWGKNSSGQLGLSDERDRES-PCHVKLLRSQKVVYISCGEEHTAVLTKS-GG 262
Query: 228 LYAFGIGSAVQL 239
++ FG GS QL
Sbjct: 263 VFTFGAGSCGQL 274
Score = 157 (60.3 bits), Expect = 3.7e-83, Sum P(4) = 3.7e-83
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + S S++ + +
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSILLDQILK 484
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + F + + + L +P A A+
Sbjct: 485 SFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAI 533
Score = 128 (50.1 bits), Expect = 2.8e-59, Sum P(4) = 2.8e-59
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y E+ +WFS+ F + N + LIG +CGLAIYN+TV
Sbjct: 763 YGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTV 804
Score = 123 (48.4 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 48/186 (25%), Positives = 82/186 (44%)
Query: 85 WGGDTHGQLGLESADKKSQSIPK-RVKG-LASVSVVQACAGYSHCLVLTSSG-VVTCT-- 139
WG + GQ G+ S IP+ +V G + +V + G +H + L G V TC
Sbjct: 4 WGYSSFGQPGIGS--NLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 140 ------HKENGCGSDPSQGVQS-NLVQ----DSHTTITSLNSPGELYTWGNNEYGQMGIN 188
H+ G +P + ++V +SH+ +L+ G++++WG GQ+G+
Sbjct: 62 TKGQLGHESEGSKPEPIGALAGQHIVHVACGESHSV--ALSDQGQVFSWGAGSDGQLGLT 119
Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV--H 246
VT P+ ++ L I I+CG H L+ + + +G S QL K
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAAD-GQFFTWGQNSYGQLGLGKECPSQ 178
Query: 247 KTPQLI 252
+PQ +
Sbjct: 179 ASPQRV 184
Score = 90 (36.7 bits), Expect = 2.9e-46, Sum P(4) = 2.9e-46
Identities = 40/146 (27%), Positives = 62/146 (42%)
Query: 177 WGNNEYGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
WG + +GQ GI +N + +PQ + + + +ACG NHS L + +Y G+ +
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62
Query: 236 AVQLDSPKSVHKTPQLIHGPWIASPVAMTA-GEDSLVSHSG-GLVVKKIYSGGDHSIVTV 293
QL K P+ I G + A GE V+ S G V + G + +
Sbjct: 63 KGQLGHESEGSK-PEPI-GALAGQHIVHVACGESHSVALSDQGQVFS--WGAGSDGQLGL 118
Query: 294 TKSSDGVLSDDF-RVLNPATQILDVN 318
T D V + LN T IL ++
Sbjct: 119 TTIEDAVTVPRLIKKLNQQT-ILQIS 143
Score = 69 (29.3 bits), Expect = 3.7e-83, Sum P(4) = 3.7e-83
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
NW+ + YF RL+ ++K ++YLL + + F+ ++ L++L+KL+ +N
Sbjct: 546 NWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIP---VLFSSYITAALRLLEKLHKVNQ 602
Query: 875 E 875
+
Sbjct: 603 K 603
Score = 40 (19.1 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 13/70 (18%), Positives = 30/70 (42%)
Query: 757 NYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNW 816
N+TI + + +K ++++ +Q KD K ++ ++Y +F + W
Sbjct: 856 NFTICRESYGVTEHKNLIEDGDKIQVQKD---NREKFVEAYVNY-------IFNCSIHEW 905
Query: 817 YLLMSDDYFE 826
Y S + +
Sbjct: 906 YTAFSTGFLK 915
Score = 38 (18.4 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 516 RQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
R H + +P +G + AF G L G GH
Sbjct: 303 RHHTLAFVPSSGMIYAFGCGTRGQL----GTGH 331
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 438 (159.2 bits), Expect = 3.7e-83, Sum P(4) = 3.7e-83
Identities = 124/387 (32%), Positives = 195/387 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL+D G+VF+WG + GQLGL + + + ++P+ +K L +++Q C
Sbjct: 95 HSVALSDQGQVFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQIS-----C---- 144
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G WH LAL G+ FTWG +++GQLGL + SQ+ P+RVK L + + Q AG +
Sbjct: 145 ---GNWHCLALAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLAQVAAGGA 200
Query: 126 HCLVLTSSGVVTCTHKENGCG----SD------P-------SQGVQSNLVQDSHTTITSL 168
H L+ SG V K N G SD P SQ V + HT + L
Sbjct: 201 HSFALSLSGAVFGWGK-NSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAV--L 257
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G ++T+G GQ+G ++ N V P+RV L+ ++ IACG +H+ S +
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSSGMI 316
Query: 229 YAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
YAFG G+ QL + + + K P + G W A ++ D+ H +VK I+SGGD
Sbjct: 317 YAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYH----IVKHIFSGGD 372
Query: 288 HSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLE 347
+ V +K + + +DDFR +N +N E + +++ + S +++ +
Sbjct: 373 QTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSSNSVNN-----VV 427
Query: 348 TVFLSPGCMNGSFLQVENDEHFSCNSK 374
+ S C NGSFL+ + DEHF + K
Sbjct: 428 QILSSAACWNGSFLEKKIDEHFKTSPK 454
Score = 357 (130.7 bits), Expect = 3.7e-83, Sum P(4) = 3.7e-83
Identities = 84/201 (41%), Positives = 119/201 (59%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRWI---SG---RPNGSTRDF--LCNYPFIFDAKAKT 951
+ + Y FY+P+++++ DI+ DY W +G RP+ +D LC+YPFIFDA+AKT
Sbjct: 605 KHIEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPS-IMQDAVTLCSYPFIFDAQAKT 663
Query: 952 TLLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYT 1008
+L+ D +QM+ A+N N L T P +L + V R N+V D +REL+ ++
Sbjct: 664 KMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELSIHS 723
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
D KKPLKV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y E
Sbjct: 724 DIDLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPE 771
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+ +WFS+ F + N + LIG
Sbjct: 772 SNLLWFSDTCFVEHNWFHLIG 792
Score = 256 (95.2 bits), Expect = 4.0e-70, Sum P(3) = 4.0e-70
Identities = 48/95 (50%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y E+ +WFS+ F + N LIG +CGLAIYN+T++++ FPLALYKK+L+
Sbjct: 763 YGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKP 822
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ +LDY D+E+ F + F
Sbjct: 823 CLEDLKELSPTEGRSLQQLLDYPGEDIEETFCLNF 857
Score = 230 (86.0 bits), Expect = 8.7e-61, Sum P(4) = 8.7e-61
Identities = 72/212 (33%), Positives = 101/212 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LAL G+ FTWG +++GQLGL + SQ+ P+RVK L + + Q AG +H
Sbjct: 145 GNWHCLALAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLAQVAAGGAH-- 201
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL+ G VF WG ++ GQLGL +D++ + P VK L S VV
Sbjct: 202 ----------SFALSLSGAVFGWGKNSSGQLGL--SDERDRESPCHVKLLRSQKVVYISC 249
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPSQGVQ------SNLVQDSHTTIT 166
G H VLT SG V T CG +P + ++ S + H T+
Sbjct: 250 GEEHTAVLTKSGGVF-TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLA 308
Query: 167 SLNSPGELYTWGNNEYGQMGINNS-NTTVTKP 197
+ S G +Y +G GQ+G ++ N P
Sbjct: 309 FVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSP 340
Score = 212 (79.7 bits), Expect = 6.5e-59, Sum P(4) = 6.5e-59
Identities = 71/226 (31%), Positives = 110/226 (48%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
HS+ L + GEV+T G +T GQLG ES K P V LA +V G SH + L+
Sbjct: 45 HSVFLLEDGEVYTCGLNTKGQLGHESEGSK----PAWVGTLAGQHIVHVACGESHSVALS 100
Query: 132 SSGVVTC--THKENGCGSDPSQGV-----------QSNLVQDS--HTTITSLNSPGELYT 176
G V + G + Q ++Q S + +L + G+ +T
Sbjct: 101 DQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFT 160
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
WG N YGQ+G+ + PQRV+SL +P+A +A G HSF LS S ++ +G S+
Sbjct: 161 WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS-GAVFGWGKNSS 219
Query: 237 VQLD-SPKSVHKTPQLIHGPWIASP--VAMTAGED--SLVSHSGGL 277
QL S + ++P H + S V ++ GE+ ++++ SGG+
Sbjct: 220 GQLGLSDERDRESP--CHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263
Score = 206 (77.6 bits), Expect = 2.7e-58, Sum P(4) = 2.7e-58
Identities = 77/252 (30%), Positives = 120/252 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+ L + GEV+T G +T GQLG ES K P V LA +V G SH
Sbjct: 45 HSVFLLEDGEVYTCGLNTKGQLGHESEGSK----PAWVGTLAGQHIVHVACGESH----- 95
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ--SIPKRVKGLASVSVVQACAG 123
S+AL+D G+VF+WG + GQLGL + + + K++ + + +C
Sbjct: 96 -------SVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI--SCGN 146
Query: 124 YSHCLVLTSSGVVTC---THKENGCGSD-PSQG----VQS----NLVQ----DSHTTITS 167
+ + T ++ + G G + PSQ V+S L Q +H+ S
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L+ G ++ WG N GQ+G+++ + P V+ L + + I+CG H+ VL+KS
Sbjct: 207 LS--GAVFGWGKNSSGQLGLSDERDRES-PCHVKLLRSQKVVYISCGEEHTAVLTKS-GG 262
Query: 228 LYAFGIGSAVQL 239
++ FG GS QL
Sbjct: 263 VFTFGAGSCGQL 274
Score = 157 (60.3 bits), Expect = 3.7e-83, Sum P(4) = 3.7e-83
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + S S++ + +
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSILLDQILK 484
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + F + + + L +P A A+
Sbjct: 485 SFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAI 533
Score = 128 (50.1 bits), Expect = 2.8e-59, Sum P(4) = 2.8e-59
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y E+ +WFS+ F + N + LIG +CGLAIYN+TV
Sbjct: 763 YGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTV 804
Score = 119 (46.9 bits), Expect = 2.9e-49, Sum P(4) = 2.9e-49
Identities = 50/186 (26%), Positives = 83/186 (44%)
Query: 85 WGGDTHGQLGLESADKKSQSIPK-RVKG-LASVSVVQACAGYSHCLVLTSSG-VVTCTHK 141
WG + GQ G+ S IP+ +V G + +V + G +H + L G V TC
Sbjct: 4 WGYSSFGQPGIGS--NLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 142 ENGC------GSDPSQ-GVQS--NLVQ----DSHTTITSLNSPGELYTWGNNEYGQMGIN 188
G GS P+ G + ++V +SH+ +L+ G++++WG GQ+G+
Sbjct: 62 TKGQLGHESEGSKPAWVGTLAGQHIVHVACGESHSV--ALSDQGQVFSWGAGSDGQLGLT 119
Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV--H 246
VT P+ ++ L I I+CG H L+ + + +G S QL K
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAAD-GQFFTWGQNSYGQLGLGKECPSQ 178
Query: 247 KTPQLI 252
+PQ +
Sbjct: 179 ASPQRV 184
Score = 69 (29.3 bits), Expect = 3.7e-83, Sum P(4) = 3.7e-83
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
NW+ + YF RL+ ++K ++YLL + + F+ ++ L++L+KL+ +N
Sbjct: 546 NWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIP---VLFSSYITAALRLLEKLHKVNQ 602
Query: 875 E 875
+
Sbjct: 603 K 603
Score = 40 (19.1 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 13/70 (18%), Positives = 30/70 (42%)
Query: 757 NYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNW 816
N+TI + + +K ++++ +Q KD K ++ ++Y +F + W
Sbjct: 856 NFTICRESYGVTEHKNLIEDGDKIQVQKD---NREKFVEAYVNY-------IFNCSIHEW 905
Query: 817 YLLMSDDYFE 826
Y S + +
Sbjct: 906 YTAFSTGFLK 915
Score = 39 (18.8 bits), Expect = 5.5e-41, Sum P(4) = 5.5e-41
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 255 PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
P I S + + E + VK++ GG+HS+
Sbjct: 12 PGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSV 47
Score = 38 (18.4 bits), Expect = 1.4e-46, Sum P(4) = 1.4e-46
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 516 RQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
R H + +P +G + AF G L G GH
Sbjct: 303 RHHTLAFVPSSGMIYAFGCGTRGQL----GTGH 331
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 432 (157.1 bits), Expect = 7.5e-82, Sum P(4) = 7.5e-82
Identities = 120/386 (31%), Positives = 193/386 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSLAL+D G++F+WG + GQLGL + ++ S ++P+ ++ L +++Q C
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTEE-SVAVPRLIQKLNQQTILQVS-----C---- 144
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +
Sbjct: 145 ---GNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 126 HCLVLTSSGVVTCTHKENG--CGSDPSQGVQS----NLVQ----------DSHTTITSLN 169
H L+ SG V N G + +S L++ + HT + L
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAV--LT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G GQ+G ++ N V P+RV L+ + IACG H+ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
AFG G+ QL + + + K P + G W A ++A D H +VK+I+SGGD
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
+ V +K + + DFR +N A +N E + +++ + + T++ +
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
+ S C NGSFL+ + DEHF + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454
Score = 361 (132.1 bits), Expect = 7.5e-82, Sum P(4) = 7.5e-82
Identities = 83/201 (41%), Positives = 120/201 (59%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRW------ISGRPNGSTRDF--LCNYPFIFDAKAKT 951
+ V Y FY+P+++++ DI+ DY W + RP+ +D LC+YPFIFDA+AKT
Sbjct: 605 KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKARPS-IIQDTVTLCSYPFIFDAQAKT 663
Query: 952 TLLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYT 1008
+L+ D +QM+ A+N N L T P +L + V R+N+V D +REL+ ++
Sbjct: 664 KMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHS 723
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
D KKPLKV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y++
Sbjct: 724 DIDLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQD 771
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+ +WFS+ F + N + LIG
Sbjct: 772 SNLLWFSDTCFVEHNWFHLIG 792
Score = 242 (90.2 bits), Expect = 9.8e-67, Sum P(3) = 9.8e-67
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVQP 822
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSP +SLQ++LDY D+E+ F + F
Sbjct: 823 GLEDLKELSPAEGRSLQELLDYPGEDIEETFCLNF 857
Score = 224 (83.9 bits), Expect = 1.4e-59, Sum P(4) = 1.4e-59
Identities = 76/257 (29%), Positives = 124/257 (48%)
Query: 39 IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
I ++G+ V+ Q C S V G HS+ L + GEV+T G +T GQLG E
Sbjct: 14 ISTNLQGI--VAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHERE 71
Query: 99 DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGCG---SDPSQGV 153
K P+++ LA +V G SH L L+ G + + G ++ S V
Sbjct: 72 GNK----PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAV 127
Query: 154 --------QSNLVQDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
Q ++Q S + +L + G+ +TWG N +GQ+G+ + PQRV SL
Sbjct: 128 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 187
Query: 204 VNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVA 262
+P+A +A G HSF LS S ++ +G+ +A QL S + ++P + V
Sbjct: 188 EGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVY 246
Query: 263 MTAGED--SLVSHSGGL 277
++ GE+ ++++ SGG+
Sbjct: 247 ISCGEEHTAVLTKSGGV 263
Score = 218 (81.8 bits), Expect = 6.0e-59, Sum P(4) = 6.0e-59
Identities = 71/212 (33%), Positives = 101/212 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGAH-- 201
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL+ G VF WG + GQLGL +D++ + P VK L + VV
Sbjct: 202 ----------SFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKLLRAQKVVYISC 249
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPSQGVQ---SNLVQDS---HTTIT 166
G H VLT SG V T CG +P + ++ S + Q + T+
Sbjct: 250 GEEHTAVLTKSGGVF-TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 308
Query: 167 SLNSPGELYTWGNNEYGQMGINNS-NTTVTKP 197
+ S G +Y +G GQ+G ++ N P
Sbjct: 309 FVPSSGLIYAFGCGARGQLGTGHTCNVKCPSP 340
Score = 209 (78.6 bits), Expect = 5.2e-58, Sum P(4) = 5.2e-58
Identities = 76/252 (30%), Positives = 121/252 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+ L + GEV+T G +T GQLG E K P+++ LA +V G SH
Sbjct: 45 HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADEHIVHVACGESH----- 95
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ--SIPKRVKGLASVSVVQACAG 123
SLAL+D G++F+WG + GQLGL + ++ + +++ + V +C
Sbjct: 96 -------SLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQV--SCGN 146
Query: 124 YSHCLVLTSSGVVTC---THKENGCGSD-PSQG----VQS----NLVQ----DSHTTITS 167
+ + T +H + G G + PSQ V+S L Q +H+ S
Sbjct: 147 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L+ G ++ WG N GQ+G+++ + P V+ L + I+CG H+ VL+KS
Sbjct: 207 LS--GAVFGWGMNNAGQLGLSDEEDRES-PCHVKLLRAQKVVYISCGEEHTAVLTKS-GG 262
Query: 228 LYAFGIGSAVQL 239
++ FG GS QL
Sbjct: 263 VFTFGAGSCGQL 274
Score = 145 (56.1 bits), Expect = 7.5e-82, Sum P(4) = 7.5e-82
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + + + + N
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSVILEQILN---- 484
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + + + + L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533
Score = 120 (47.3 bits), Expect = 9.9e-57, Sum P(4) = 9.9e-57
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y+++ +WFS+ F + N + LIG CGLAIYN TV
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTV 804
Score = 120 (47.3 bits), Expect = 8.9e-49, Sum P(4) = 8.9e-49
Identities = 54/212 (25%), Positives = 92/212 (43%)
Query: 85 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKEN 143
WG + GQ G+ + + + P+ ++ SV + G H + L G V TC
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 144 GC------GSDPSQ-GV--QSNLVQ----DSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
G G+ P Q G ++V +SH+ +L+ G+L++WG GQ+G+ +
Sbjct: 64 GQLGHEREGNKPEQIGALADEHIVHVACGESHSL--ALSDRGQLFSWGAGSDGQLGLMTT 121
Query: 191 NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV--HKT 248
+V P+ ++ L I ++CG H L+ + + +G S QL K +
Sbjct: 122 EESVAVPRLIQKLNQQTILQVSCGNWHCLALAAD-GQFFTWGKNSHGQLGLGKEFPSQAS 180
Query: 249 PQLIHGPWIASPVAMTA--GEDSL-VSHSGGL 277
PQ + P+A A G S +S SG +
Sbjct: 181 PQRVRS-LEGIPLAQVAAGGAHSFALSLSGAV 211
Score = 71 (30.1 bits), Expect = 7.5e-82, Sum P(4) = 7.5e-82
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLN 873
NW+ + YF +L+ ++K ++YLL+ + FN ++ L++L+KL +N
Sbjct: 546 NWWSQVCPKYFTKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALRLLEKLYKVN 601
Score = 44 (20.5 bits), Expect = 6.5e-41, Sum P(4) = 6.5e-41
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 255 PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
P I++ + E + VK++ GGDHS+
Sbjct: 12 PGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSV 47
Score = 43 (20.2 bits), Expect = 5.5e-49, Sum P(4) = 5.5e-49
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 516 RQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
RQH + +P +G + AF G L G GH
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGARGQL----GTGH 331
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 431 (156.8 bits), Expect = 7.6e-82, Sum P(4) = 7.6e-82
Identities = 120/386 (31%), Positives = 192/386 (49%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSLAL+D G++F+WG + GQLGL + + S ++P+ ++ L +++Q C
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVS-----C---- 144
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +
Sbjct: 145 ---GNWHCLALAADGQFFTWGKNSHGQLGL-GKEYPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 126 HCLVLTSSGVVTCTHKENG--CGSDPSQGVQS----NLVQ----------DSHTTITSLN 169
H L+ SG V N G + +S L++ + HT + L
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G GQ+G ++ N V P+RV L+ + IACG H+ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
AFG G+ QL + + + K P + G W A ++A D H +VK+I+SGGD
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
+ V +K + + DFR +N A +N E + +++ + + T++ +
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTMNG-----VVQ 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
+ S C NGSFL+ + DEHF + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454
Score = 362 (132.5 bits), Expect = 7.6e-82, Sum P(4) = 7.6e-82
Identities = 82/200 (41%), Positives = 116/200 (58%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF-------LCNYPFIFDAKAKTT 952
+ V Y FY+P+++ + DI+ DY W + TR LC+YPFIFDA+AKT
Sbjct: 605 KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKTRPSIIQDTVTLCSYPFIFDAQAKTK 664
Query: 953 LLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYTT 1009
+L+ D +QM+ A+N N L T P +L + V R+N+V D +REL+ ++
Sbjct: 665 MLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHSD 724
Query: 1010 NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEET 1069
D KKPLKV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y+++
Sbjct: 725 IDLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDS 772
Query: 1070 RSIWFSEDTFEDQNMYFLIG 1089
+WFS+ F + N + LIG
Sbjct: 773 NLLWFSDTCFVEHNWFHLIG 792
Score = 247 (92.0 bits), Expect = 3.0e-67, Sum P(3) = 3.0e-67
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ++LDY D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857
Score = 225 (84.3 bits), Expect = 8.7e-60, Sum P(4) = 8.7e-60
Identities = 76/257 (29%), Positives = 124/257 (48%)
Query: 39 IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
I ++G+ V+ Q C S V G HS+ L + GEV+T G +T GQLG E
Sbjct: 14 ISTNLQGI--VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHERE 71
Query: 99 DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGCG---SDPSQGV 153
K P+++ LA +V G SH L L+ G + + G ++ S V
Sbjct: 72 GNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV 127
Query: 154 --------QSNLVQDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
Q ++Q S + +L + G+ +TWG N +GQ+G+ + PQRV SL
Sbjct: 128 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSL 187
Query: 204 VNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVA 262
+P+A +A G HSF LS S ++ +G+ +A QL S + ++P + V
Sbjct: 188 EGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVY 246
Query: 263 MTAGED--SLVSHSGGL 277
++ GE+ ++++ SGG+
Sbjct: 247 ISCGEEHTAVLTKSGGV 263
Score = 219 (82.2 bits), Expect = 3.7e-59, Sum P(4) = 3.7e-59
Identities = 71/212 (33%), Positives = 101/212 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGL-GKEYPSQASPQRVRSLEGIPLAQVAAGGAH-- 201
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL+ G VF WG + GQLGL +D++ + P VK L + VV
Sbjct: 202 ----------SFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKLLRTQKVVYISC 249
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPSQGVQ---SNLVQDS---HTTIT 166
G H VLT SG V T CG +P + ++ S + Q + T+
Sbjct: 250 GEEHTAVLTKSGGVF-TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 308
Query: 167 SLNSPGELYTWGNNEYGQMGINNS-NTTVTKP 197
+ S G +Y +G GQ+G ++ N P
Sbjct: 309 FVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSP 340
Score = 209 (78.6 bits), Expect = 4.0e-58, Sum P(4) = 4.0e-58
Identities = 76/252 (30%), Positives = 120/252 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+ L + GEV+T G +T GQLG E K P+++ LA +V G SH
Sbjct: 45 HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ--SIPKRVKGLASVSVVQACAG 123
SLAL+D G++F+WG + GQLGL + + + +++ + V +C
Sbjct: 96 -------SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV--SCGN 146
Query: 124 YSHCLVLTSSGVVTC---THKENGCGSD-PSQG----VQS----NLVQ----DSHTTITS 167
+ + T +H + G G + PSQ V+S L Q +H+ S
Sbjct: 147 WHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L+ G ++ WG N GQ+G+++ + P V+ L + I+CG H+ VL+KS
Sbjct: 207 LS--GAVFGWGMNNAGQLGLSDEEDRES-PCHVKLLRTQKVVYISCGEEHTAVLTKS-GG 262
Query: 228 LYAFGIGSAVQL 239
++ FG GS QL
Sbjct: 263 VFTFGAGSCGQL 274
Score = 146 (56.5 bits), Expect = 7.6e-82, Sum P(4) = 7.6e-82
Identities = 32/109 (29%), Positives = 59/109 (54%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + S S++ +
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 484
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + + + + L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533
Score = 121 (47.7 bits), Expect = 5.5e-49, Sum P(4) = 5.5e-49
Identities = 54/212 (25%), Positives = 93/212 (43%)
Query: 85 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKEN 143
WG + GQ G+ + + + P+ ++ SV + G +H + L G V TC
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 144 GC------GSDPSQ-GV--QSNLVQ----DSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
G G+ P Q G ++V +SH+ +L+ G+L++WG GQ+G+ +
Sbjct: 64 GQLGHEREGNKPEQIGALADQHIVHVACGESHSL--ALSDRGQLFSWGAGSDGQLGLMTT 121
Query: 191 NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV--HKT 248
+V P+ ++ L I ++CG H L+ + + +G S QL K +
Sbjct: 122 EDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD-GQFFTWGKNSHGQLGLGKEYPSQAS 180
Query: 249 PQLIHGPWIASPVAMTA--GEDSL-VSHSGGL 277
PQ + P+A A G S +S SG +
Sbjct: 181 PQRVRS-LEGIPLAQVAAGGAHSFALSLSGAV 211
Score = 120 (47.3 bits), Expect = 1.3e-56, Sum P(4) = 1.3e-56
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y+++ +WFS+ F + N + LIG CGLAIYN TV
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTV 804
Score = 70 (29.7 bits), Expect = 7.6e-82, Sum P(4) = 7.6e-82
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLN 873
NW+ + YF +L+ ++K ++YLL+ + FN ++ L++L+KL +N
Sbjct: 546 NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVN 601
Score = 43 (20.2 bits), Expect = 4.3e-49, Sum P(4) = 4.3e-49
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 516 RQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
RQH + +P +G + AF G L G GH
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGAKGQL----GTGH 331
Score = 39 (18.8 bits), Expect = 1.7e-40, Sum P(4) = 1.7e-40
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 255 PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
P I++ + E + VK++ GG+HS+
Sbjct: 12 PGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSV 47
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 428 (155.7 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 120/386 (31%), Positives = 193/386 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSLAL+D G++F+WG + GQLGL + + S ++P+ ++ L +++Q C
Sbjct: 95 HSLALSDQGQLFSWGAGSDGQLGLMTIED-SVAVPRLIQKLNQQTILQVS-----C---- 144
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +
Sbjct: 145 ---GNWHCLALAADGQFFTWGRNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVVAGGA 200
Query: 126 HCLVLTSSGVVTCTHKENG--CGSDPSQGVQS----NLVQ----------DSHTTITSLN 169
H L+ SG V N G + +S L++ + HT + L
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G GQ+G ++ N V P+RV L+ + IACG H+ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
AFG G+ QL + + + K P + G W A ++A D H +VK+I+SGGD
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
+ V +K + + DFR++N A +N E + +++ + + T++ +
Sbjct: 374 TFVLCSKYENSSPAVDFRMMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
+ S C NGSFL+ + DEHF + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454
Score = 360 (131.8 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 83/201 (41%), Positives = 119/201 (59%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRW------ISGRPNGSTRDF--LCNYPFIFDAKAKT 951
+ V Y FY+P+++++ DI+ DY W + RP+ +D LC+YPFIFDA+AKT
Sbjct: 605 KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKARPS-IMQDAVTLCSYPFIFDAQAKT 663
Query: 952 TLLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYT 1008
+L+ D +QM+ A+N N L T P +L + V R N+V D +REL+ ++
Sbjct: 664 KMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELSIHS 723
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
D KKPLKV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y++
Sbjct: 724 DIDLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQD 771
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+ +WFS+ F + N + LIG
Sbjct: 772 SNLLWFSDTCFVEHNWFHLIG 792
Score = 247 (92.0 bits), Expect = 6.4e-67, Sum P(3) = 6.4e-67
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ++LDY D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857
Score = 221 (82.9 bits), Expect = 3.0e-59, Sum P(4) = 3.0e-59
Identities = 72/212 (33%), Positives = 101/212 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +H
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVVAGGAH-- 201
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL+ G VF WG + GQLGL +D+K + P VK L + VV
Sbjct: 202 ----------SFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKLLRTQKVVYISC 249
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPSQGVQ---SNLVQDS---HTTIT 166
G H VLT SG V T CG +P + ++ S + Q + T+
Sbjct: 250 GEEHTAVLTKSGGVF-TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 308
Query: 167 SLNSPGELYTWGNNEYGQMGINNS-NTTVTKP 197
+ S G +Y +G GQ+G ++ N P
Sbjct: 309 FVPSSGLIYAFGCGARGQLGTGHTCNVKCPSP 340
Score = 219 (82.2 bits), Expect = 4.8e-59, Sum P(4) = 4.8e-59
Identities = 75/257 (29%), Positives = 122/257 (47%)
Query: 39 IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
I ++G+ V+ Q C S V G HS+ L + GEV+T G +T GQLG E
Sbjct: 14 ISPNLQGI--VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHERE 71
Query: 99 DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGCGS---DPSQGV 153
K P+++ LA +V G SH L L+ G + + G + S V
Sbjct: 72 GNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAV 127
Query: 154 --------QSNLVQDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
Q ++Q S + +L + G+ +TWG N +GQ+G+ + PQRV SL
Sbjct: 128 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL 187
Query: 204 VNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVA 262
+P+A + G HSF LS S ++ +G+ +A QL S + ++P + V
Sbjct: 188 EGIPLAQVVAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 263 MTAGED--SLVSHSGGL 277
++ GE+ ++++ SGG+
Sbjct: 247 ISCGEEHTAVLTKSGGV 263
Score = 209 (78.6 bits), Expect = 5.3e-58, Sum P(4) = 5.3e-58
Identities = 76/252 (30%), Positives = 120/252 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+ L + GEV+T G +T GQLG E K P+++ LA +V G SH
Sbjct: 45 HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ--SIPKRVKGLASVSVVQACAG 123
SLAL+D G++F+WG + GQLGL + + + +++ + V +C
Sbjct: 96 -------SLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQV--SCGN 146
Query: 124 YSHCLVLTSSGVVTC---THKENGCGSD-PSQG----VQS----NLVQ----DSHTTITS 167
+ + T +H + G G + PSQ V+S L Q +H+ S
Sbjct: 147 WHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L+ G ++ WG N GQ+G+++ + P V+ L + I+CG H+ VL+KS
Sbjct: 207 LS--GAVFGWGMNNAGQLGLSDEKDRES-PCHVKLLRTQKVVYISCGEEHTAVLTKS-GG 262
Query: 228 LYAFGIGSAVQL 239
++ FG GS QL
Sbjct: 263 VFTFGAGSCGQL 274
Score = 146 (56.5 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + + + + N
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSMILEQILN---- 484
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + + + + L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533
Score = 120 (47.3 bits), Expect = 2.2e-56, Sum P(4) = 2.2e-56
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y+++ +WFS+ F + N + LIG CGLAIYN TV
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTV 804
Score = 116 (45.9 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 85 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKEN 143
WG + GQ G+ + + P+ ++ SV + G +H + L G V TC
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 144 GC------GSDPSQ-GV--QSNLVQ----DSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
G G+ P Q G ++V +SH+ +L+ G+L++WG GQ+G+
Sbjct: 64 GQLGHEREGNKPEQIGALADQHIVHVACGESHSL--ALSDQGQLFSWGAGSDGQLGLMTI 121
Query: 191 NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV--HKT 248
+V P+ ++ L I ++CG H L+ + + +G S QL K +
Sbjct: 122 EDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD-GQFFTWGRNSHGQLGLGKEFPSQAS 180
Query: 249 PQLI 252
PQ +
Sbjct: 181 PQRV 184
Score = 71 (30.1 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLN 873
NW+ + YF +L+ ++K ++YLL+ + FN ++ L++L+KL +N
Sbjct: 546 NWWSQVCPKYFTKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVN 601
Score = 43 (20.2 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 516 RQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
RQH + +P +G + AF G L G GH
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGARGQL----GTGH 331
Score = 38 (18.4 bits), Expect = 2.8e-40, Sum P(4) = 2.8e-40
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 279 VKKIYSGGDHSI 290
VK++ GG+HS+
Sbjct: 36 VKEVACGGNHSV 47
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 426 (155.0 bits), Expect = 5.8e-81, Sum P(4) = 5.8e-81
Identities = 120/386 (31%), Positives = 192/386 (49%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSLAL+D G++F+WG + GQLGL + + S ++P+ ++ L +++Q C
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVS-----C---- 144
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +
Sbjct: 145 ---GNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 126 HCLVLTSSGVVTCTHKENG--CGSDPSQGVQS----NLVQ----------DSHTTITSLN 169
H L+ SG V N G + +S L++ + HT + L
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G GQ+G ++ N V P+RV L+ + IACG H+ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
AFG G+ QL + + + K P + G W A ++A D H +VK+I+SGGD
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
+ V +K + + DFR +N A +N E + +++ + + T++ +
Sbjct: 374 TFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
+ S C NGSFL+ + DEHF + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454
Score = 360 (131.8 bits), Expect = 5.8e-81, Sum P(4) = 5.8e-81
Identities = 83/201 (41%), Positives = 119/201 (59%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRW------ISGRPNGSTRDF--LCNYPFIFDAKAKT 951
+ V Y FY+P+++ + DI+ DY W + RP+ +D LC+YPFIFDA+AKT
Sbjct: 605 KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKARPS-IIQDTVTLCSYPFIFDAQAKT 663
Query: 952 TLLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYT 1008
+L+ D +QM+ A+N N L T P +L + V R+N+V D +REL+ ++
Sbjct: 664 KMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHS 723
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
D KKPLKV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y++
Sbjct: 724 DIDLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQD 771
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+ +WFS+ F + N + LIG
Sbjct: 772 SNLLWFSDTCFVEHNWFHLIG 792
Score = 246 (91.7 bits), Expect = 1.4e-66, Sum P(3) = 1.4e-66
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ++LDY D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857
Score = 223 (83.6 bits), Expect = 3.0e-59, Sum P(4) = 3.0e-59
Identities = 75/257 (29%), Positives = 124/257 (48%)
Query: 39 IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
I ++G+ V+ Q C S V G HS+ L + GEV+T G +T GQLG E
Sbjct: 14 ISTNLQGI--VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHERE 71
Query: 99 DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGCG---SDPSQGV 153
K P+++ LA ++ G SH L L+ G + + G ++ S V
Sbjct: 72 GNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV 127
Query: 154 --------QSNLVQDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
Q ++Q S + +L + G+ +TWG N +GQ+G+ + PQRV SL
Sbjct: 128 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 187
Query: 204 VNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVA 262
+P+A +A G HSF LS S ++ +G+ +A QL S + ++P + V
Sbjct: 188 EGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 263 MTAGED--SLVSHSGGL 277
++ GE+ ++++ SGG+
Sbjct: 247 ISCGEEHTAVLTKSGGV 263
Score = 222 (83.2 bits), Expect = 3.8e-59, Sum P(4) = 3.8e-59
Identities = 72/212 (33%), Positives = 101/212 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGAH-- 201
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL+ G VF WG + GQLGL +D+K + P VK L + VV
Sbjct: 202 ----------SFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKLLRTQKVVYISC 249
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPSQGVQ---SNLVQDS---HTTIT 166
G H VLT SG V T CG +P + ++ S + Q + T+
Sbjct: 250 GEEHTAVLTKSGGVF-TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 308
Query: 167 SLNSPGELYTWGNNEYGQMGINNS-NTTVTKP 197
+ S G +Y +G GQ+G ++ N P
Sbjct: 309 FVPSSGLIYAFGCGARGQLGTGHTCNVKCPSP 340
Score = 208 (78.3 bits), Expect = 1.1e-57, Sum P(4) = 1.1e-57
Identities = 75/252 (29%), Positives = 120/252 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+ L + GEV+T G +T GQLG E K P+++ LA ++ G SH
Sbjct: 45 HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ--SIPKRVKGLASVSVVQACAG 123
SLAL+D G++F+WG + GQLGL + + + +++ + V +C
Sbjct: 96 -------SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV--SCGN 146
Query: 124 YSHCLVLTSSGVVTC---THKENGCGSD-PSQG----VQS----NLVQ----DSHTTITS 167
+ + T +H + G G + PSQ V+S L Q +H+ S
Sbjct: 147 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L+ G ++ WG N GQ+G+++ + P V+ L + I+CG H+ VL+KS
Sbjct: 207 LS--GAVFGWGMNNAGQLGLSDEKDRES-PCHVKLLRTQKVVYISCGEEHTAVLTKS-GG 262
Query: 228 LYAFGIGSAVQL 239
++ FG GS QL
Sbjct: 263 VFTFGAGSCGQL 274
Score = 146 (56.5 bits), Expect = 5.8e-81, Sum P(4) = 5.8e-81
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + + + + N
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSMILEQILN---- 484
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + + + + L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533
Score = 120 (47.3 bits), Expect = 5.9e-56, Sum P(4) = 5.9e-56
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y+++ +WFS+ F + N + LIG CGLAIYN TV
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTV 804
Score = 120 (47.3 bits), Expect = 1.5e-48, Sum P(4) = 1.5e-48
Identities = 53/212 (25%), Positives = 93/212 (43%)
Query: 85 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKEN 143
WG + GQ G+ + + + P+ ++ SV + G +H + L G V TC
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 144 GC------GSDPSQ-GV--QSNLVQ----DSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
G G+ P Q G +++ +SH+ +L+ G+L++WG GQ+G+ +
Sbjct: 64 GQLGHEREGNKPEQIGALADQHIIHVACGESHSL--ALSDRGQLFSWGAGSDGQLGLMTT 121
Query: 191 NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV--HKT 248
+V P+ ++ L I ++CG H L+ + + +G S QL K +
Sbjct: 122 EDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD-GQFFTWGKNSHGQLGLGKEFPSQAS 180
Query: 249 PQLIHGPWIASPVAMTA--GEDSL-VSHSGGL 277
PQ + P+A A G S +S SG +
Sbjct: 181 PQRVRS-LEGIPLAQVAAGGAHSFALSLSGAV 211
Score = 69 (29.3 bits), Expect = 5.8e-81, Sum P(4) = 5.8e-81
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLN 873
NW+ + YF +L+ ++K ++YLL+ + FN ++ L++L+KL +N
Sbjct: 546 NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVN 601
Score = 43 (20.2 bits), Expect = 1.5e-48, Sum P(4) = 1.5e-48
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 516 RQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
RQH + +P +G + AF G L G GH
Sbjct: 303 RQHTLAFVPSSGLIYAFGCGARGQL----GTGH 331
Score = 39 (18.8 bits), Expect = 3.5e-40, Sum P(4) = 3.5e-40
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 255 PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
P I++ + E + VK++ GG+HS+
Sbjct: 12 PGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSV 47
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 416 (151.5 bits), Expect = 8.7e-80, Sum P(4) = 8.7e-80
Identities = 120/386 (31%), Positives = 191/386 (49%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSLAL+D G++F+WG + GQLGL + + S ++P+ ++ L +++Q C
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVS-----C---- 144
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +
Sbjct: 145 ---GNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200
Query: 126 HCLVLTSSGVVTCTHKENG--CGSDPSQGVQS----NLVQ----------DSHTTITSLN 169
H L+ SG V N G + +S L++ + HT + L
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G GQ+G ++ N V P+RV L+ + IACG H+ L S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIY 317
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
AFG G+ QL + + + K P + G W A ++A D VVK+I+SGGD
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYR----VVKQIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
+ V + + + DFR +N A +N E + +++ + + T++ +
Sbjct: 374 TFVLCSTYENSSPAVDFRTVNQAHYTNLINDETIAVWRQKLTEHNNANTVNG-----VVQ 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
+ S C NGSFL+ + DEHF + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454
Score = 353 (129.3 bits), Expect = 8.7e-80, Sum P(4) = 8.7e-80
Identities = 83/201 (41%), Positives = 120/201 (59%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRWI---SG---RPNGSTRDF--LCNYPFIFDAKAKT 951
+ V Y FY+P+++++ DI+ DY W SG RP+ +D LC+YPFIFDA+AKT
Sbjct: 605 KHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKARPS-IMQDAVTLCSYPFIFDAQAKT 663
Query: 952 TLLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYT 1008
+L+ D +QM+ A+N N L T P +L + V R+++V D +REL+ ++
Sbjct: 664 KMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNHLVGDALRELSIHS 723
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
D KKPLKV F GEE DAGGV +EF +LLLKE+L+P YGMF Y++
Sbjct: 724 DIDLKKPLKVI------------FDGEEGVDAGGVTKEFFLLLLKELLNPIYGMFTYYQD 771
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+ +WFS+ F + N + LIG
Sbjct: 772 SNLLWFSDTCFVEHNWFHLIG 792
Score = 249 (92.7 bits), Expect = 3.1e-66, Sum P(3) = 3.1e-66
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ++LDY D+E+ F + F
Sbjct: 823 SLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857
Score = 228 (85.3 bits), Expect = 1.4e-59, Sum P(4) = 1.4e-59
Identities = 75/257 (29%), Positives = 125/257 (48%)
Query: 39 IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
I ++G+ V+ Q C S + G HS+ L + GEV+T G +T GQLG E
Sbjct: 14 ISSNLQGI--VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHERE 71
Query: 99 DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGCG---SDPSQGV 153
K P+++ LA ++ G SH L L+ G + + G ++ S V
Sbjct: 72 GNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV 127
Query: 154 --------QSNLVQDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
Q ++Q S + +L + G+ +TWG N +GQ+G+ + T PQRV SL
Sbjct: 128 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL 187
Query: 204 VNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVA 262
+P+A +A G HSF LS S ++ +G+ +A QL S + ++P + V
Sbjct: 188 EGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 263 MTAGED--SLVSHSGGL 277
++ GE+ ++++ SGG+
Sbjct: 247 ISCGEEHTAVLTKSGGV 263
Score = 222 (83.2 bits), Expect = 5.9e-59, Sum P(4) = 5.9e-59
Identities = 72/212 (33%), Positives = 101/212 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGAH-- 201
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL+ G VF WG + GQLGL +D+K + P VK L + VV
Sbjct: 202 ----------SFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKLLRTQKVVYISC 249
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPSQGVQ---SNLVQDS---HTTIT 166
G H VLT SG V T CG +P + ++ S + Q + T+
Sbjct: 250 GEEHTAVLTKSGGVF-TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLA 308
Query: 167 SLNSPGELYTWGNNEYGQMGINNS-NTTVTKP 197
+ S G +Y +G GQ+G ++ N P
Sbjct: 309 LVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSP 340
Score = 207 (77.9 bits), Expect = 2.1e-57, Sum P(4) = 2.1e-57
Identities = 75/252 (29%), Positives = 120/252 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+ L + GEV+T G +T GQLG E K P+++ LA ++ G SH
Sbjct: 45 HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ--SIPKRVKGLASVSVVQACAG 123
SLAL+D G++F+WG + GQLGL + + + +++ + V +C
Sbjct: 96 -------SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV--SCGN 146
Query: 124 YSHCLVLTSSGVVTC---THKENGCGSD-PSQG----VQS----NLVQ----DSHTTITS 167
+ + T +H + G G + PSQ V+S L Q +H+ S
Sbjct: 147 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L+ G ++ WG N GQ+G+++ + P V+ L + I+CG H+ VL+KS
Sbjct: 207 LS--GAVFGWGMNNAGQLGLSDEKDRES-PCHVKLLRTQKVVYISCGEEHTAVLTKS-GG 262
Query: 228 LYAFGIGSAVQL 239
++ FG GS QL
Sbjct: 263 VFTFGAGSCGQL 274
Score = 146 (56.5 bits), Expect = 8.7e-80, Sum P(4) = 8.7e-80
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + + + + N
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMHSQHSMILEQILN---- 484
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + + + + L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533
Score = 125 (49.1 bits), Expect = 6.9e-49, Sum P(4) = 6.9e-49
Identities = 53/212 (25%), Positives = 94/212 (44%)
Query: 85 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKEN 143
WG + GQ G+ S + + P+ + ++ S+ + G +H + L G V TC
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 144 GC------GSDPSQ-GV--QSNLVQ----DSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
G G+ P Q G +++ +SH+ +L+ G+L++WG GQ+G+ +
Sbjct: 64 GQLGHEREGNKPEQIGALADQHIIHVACGESHSL--ALSDRGQLFSWGAGSDGQLGLMTT 121
Query: 191 NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV--HKT 248
+V P+ ++ L I ++CG H L+ + + +G S QL K +
Sbjct: 122 EDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD-GQFFTWGKNSHGQLGLGKEFPSQTS 180
Query: 249 PQLIHGPWIASPVAMTA--GEDSL-VSHSGGL 277
PQ + P+A A G S +S SG +
Sbjct: 181 PQRVRS-LEGIPLAQVAAGGAHSFALSLSGAV 211
Score = 120 (47.3 bits), Expect = 1.6e-55, Sum P(4) = 1.6e-55
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y+++ +WFS+ F + N + LIG CGLAIYN TV
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTV 804
Score = 70 (29.7 bits), Expect = 8.7e-80, Sum P(4) = 8.7e-80
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLN 873
NW+ YF +L+ ++K ++YLL+ + FN ++ L++L+KL +N
Sbjct: 546 NWWSQACPKYFMKLVTLYKSAVLYLLRGRKTFLIP---VLFNNYMTATLKLLEKLYKVN 601
Score = 41 (19.5 bits), Expect = 1.1e-48, Sum P(4) = 1.1e-48
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 516 RQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
RQH + +P +G + AF G L G GH
Sbjct: 303 RQHTLALVPSSGLIYAFGCGAKGQL----GTGH 331
Score = 40 (19.1 bits), Expect = 4.3e-40, Sum P(4) = 4.3e-40
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 255 PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
P I+S + E + +K++ GG+HS+
Sbjct: 12 PGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSV 47
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 455 (165.2 bits), Expect = 1.1e-75, Sum P(2) = 1.1e-75
Identities = 127/392 (32%), Positives = 196/392 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+LALND G+V+ WG D+ GQLGL +++ + +P+ +K L+ + +VQ GY
Sbjct: 95 HTLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQIVQVACGY------- 146
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+HSLAL+ EVF WG + +GQLGL D K Q+ P+ +K L + +Q AG +
Sbjct: 147 -----YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAAGGA 200
Query: 126 HCLVLTSSGVVTC--THKENGCG-SDPSQGVQSNLVQDSHTT-----------ITSLNSP 171
H VLT SG + +K G +D + NL++ T +L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G ++T+G YGQ+G +NS + P++V L+ + IACG H+ S R+Y+F
Sbjct: 261 GGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 232 GIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
G+G QL + S K+P + G W P D + VK+I+SGGD S
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPPD--IDSEEYFCVKRIFSGGDQSF 375
Query: 291 VTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVF 350
+ + DDFR +P+ QI VN E L ++ + ++ ++ F
Sbjct: 376 SHYSNPQNCGPPDDFRCPDPSKQIWTVN-ETL--IQKWLSYPSG--RFPVEIANEIDGTF 430
Query: 351 LSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
S GC+NGSFL V ND+H+ +K FS + ++
Sbjct: 431 SSSGCLNGSFLAVSNDDHYRTGTK-FSGVDMN 461
Score = 399 (145.5 bits), Expect = 1.1e-75, Sum P(2) = 1.1e-75
Identities = 112/347 (32%), Positives = 182/347 (52%)
Query: 761 INMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDV-FGITFRNWYLL 819
++M L+ K++ +P Q + ++ +L K+L L PD+E + F +T L+
Sbjct: 458 VDMNAARLLFHKLI-QPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLM 516
Query: 820 MSDDYFERLILIFKQCLIYLLQQP-GVVD---STNGDITFNRKLSFCLQV---LQKLNSL 872
+ F + + F L+ L + P V++ S F + + +V L KL +
Sbjct: 517 SDSNNFTTIAIPFGTALVNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKI 576
Query: 873 N-----NETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
S + + + + G+ + Y FY+ ++ + DIR DY W+
Sbjct: 577 GIPPSERRIFNSFLHTALKVLEILHKVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQ 636
Query: 928 GRPNGSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HT 982
+ G D +C YPF+FDA+AKTTLL+ D +QM+ A++Q + F P +
Sbjct: 637 QQAYGMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIES 696
Query: 983 LNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGG 1042
+N L + V R+NIV D + L + D+KKPLKV I++ GE+A DAGG
Sbjct: 697 VNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV-----IFV-------GEDAVDAGG 744
Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
VR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 745 VRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 791
Score = 275 (101.9 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 52/101 (51%), Positives = 73/101 (72%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L + L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 856
Score = 226 (84.6 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 77/264 (29%), Positives = 126/264 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL---ESADKKSQSIPKRVKGLASVSVVQ 119
+LALND G+V+ WG D+ GQLGL E + ++I K + + V V
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI-KSLSDIQIVQV-- 142
Query: 120 ACAGYSHCLVLTSSGVVTC---THKENGCGSDPSQGVQSNLVQD-------------SHT 163
AC Y + +S V + + G G D + L++ +H+
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHS 202
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ +L+ G ++ WG N++GQ+G+N+ N P ++SL I I CG +H+ L+K
Sbjct: 203 FVLTLS--GAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLRTQKIVYICCGEDHTAALTK 259
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHK 247
++ FG G QL + H+
Sbjct: 260 E-GGVFTFGAGGYGQLGHNSTSHE 282
Score = 204 (76.9 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 76/277 (27%), Positives = 123/277 (44%)
Query: 19 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
WG + GQLGL D++ P++ + V G C GL H++ + D
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV--G---C-------GLRHTVFVLD 51
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
G V+T G + GQLG E + KK P++V L + ++V G +H L L G V
Sbjct: 52 DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYA 107
Query: 139 THKENG-----CGSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNNEYG 183
++ GS+ V N+ S I +L+ E++ WG N+YG
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SP 242
Q+G+ PQ ++SL+ +P +A G HSFVL+ S ++ +G QL +
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLND 226
Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 165 (63.1 bits), Expect = 4.4e-62, Sum P(3) = 4.4e-62
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWF-SEDTFED----QNMYFLIGKEYVPCTY 1097
VRRE ++ E+L + +Y++ + F ED + + + LI +E +
Sbjct: 705 VRRENIVGDAMEVLRKTKNI--DYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLD--- 759
Query: 1098 ISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MF+ YE++R IWFS+ TFED +++ LIG +CGLAIYN+T+
Sbjct: 760 -PKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTI 803
Score = 153 (58.9 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 37/112 (33%), Positives = 58/112 (51%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL V ND+H+ +K GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
A L + L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 ASLEKN--LIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 405 (147.6 bits), Expect = 7.6e-75, Sum P(3) = 7.6e-75
Identities = 121/412 (29%), Positives = 192/412 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLA+N+ G+VF WG GQLGL +A++ + +P+ +K L + Q G HC+
Sbjct: 92 GQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVR-VPRLIKKLCEHRISQVMCGNHHCI 150
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
AL+ G++F WG ++ GQLGL + + S P+ +K L + + Q A
Sbjct: 151 ------------ALSKDGQLFVWGENSSGQLGLGKGEPSTLS-PQPLKSLCGIPLTQISA 197
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNL------------VQDSHTTIT 166
G H L+ SG V K + G + + V ++ + HT
Sbjct: 198 GGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTA-- 255
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L G L+T+GN GQ+G ++S P+RV L+ ++ IACG NH+ S
Sbjct: 256 ALTKEGGLFTFGNGSKGQLG-HDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTG 314
Query: 227 RLYAFGIGSAVQLDSP-KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
+YAFG + QL + + K+P + P+ + + + + + KI+SG
Sbjct: 315 LIYAFGCNTQGQLGTGIRGSAKSPVPVSN---IQPLCI----GNAYTRTEHCTIAKIHSG 367
Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
GDH+ + ++ DDFR+LN I +N E L ++ SD ++ D++L
Sbjct: 368 GDHNFLLLSTVEGLSCPDDFRILNTTKSIALINSESLDSWRMKLHD-NSDSSITNDIILL 426
Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK----KFSFIKLSLINWFMKLHFS 393
L S C N SFL +D HF N K F+ ++L L MK F+
Sbjct: 427 LS----STACWNASFLDQSDDGHFKTNPKVPGIDFNAVRL-LFETLMKPAFA 473
Score = 368 (134.6 bits), Expect = 7.6e-75, Sum P(3) = 7.6e-75
Identities = 83/199 (41%), Positives = 117/199 (58%)
Query: 901 KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRD-------FLCNYPFIFDAKAKTTL 953
+V Y FY+PD+AT+ DI+ DY +W + + R LC YPFI +A+AKTT+
Sbjct: 603 RVEYNHFYIPDIATLVDIQEDYLKWFLRKADIKMRYPPVQGSVTLCAYPFILNAQAKTTV 662
Query: 954 LEMDQRIQMEHAMNQTNFY--LFLQTFNPHTL-NQYLEVEVSRDNIVEDTIRELAQYTTN 1010
L+ D +QM+ A++ N + L T P N +L + V R+++V D +REL Y
Sbjct: 663 LQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFLVLHVRRNHLVSDALRELTIYNDV 722
Query: 1011 DFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETR 1070
D KKPLKV F GEEA DAGGV +EF +LLLKE+++P YGMF +Y E+
Sbjct: 723 DLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELMNPIYGMFTQYSESN 770
Query: 1071 SIWFSEDTFEDQNMYFLIG 1089
+WFS+ F + N + LIG
Sbjct: 771 LLWFSDKCFVEHNWFHLIG 789
Score = 241 (89.9 bits), Expect = 1.5e-61, Sum P(3) = 1.5e-61
Identities = 48/102 (47%), Positives = 70/102 (68%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T+Y E+ +WFS+ F + N LIG +CGLAIYN T++++ FPL LYKK+L+
Sbjct: 760 YGMFTQYSESNLLWFSDKCFVEHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLEISP 819
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF---RNWY 817
L DLK+LSPT +SLQ +L++ E D+E+ F + F R +Y
Sbjct: 820 TLDDLKELSPTEGRSLQQLLEF-EGDVEETFCLNFAITREYY 860
Score = 205 (77.2 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 74/254 (29%), Positives = 115/254 (45%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
M G H +AL+ G++F WG ++ GQLGL + + S P+ +K L + + Q AG H
Sbjct: 143 MCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS-PQPLKSLCGIPLTQISAGGDH 201
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
S AL+ G VF WG ++ GQLGL D++ +++P +K L S VV
Sbjct: 202 ------------SFALSFSGAVFGWGKNSAGQLGLN--DEQDRAVPCHIKFLRSQKVVYI 247
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPSQ------------GVQ-SNLVQDSHTTI 165
G H LT G + T + G G D ++ G + S + + T+
Sbjct: 248 SCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTL 307
Query: 166 TSLNSPGELYTWGNNEYGQMG--INNSNTTVTKPQRVESLV---------NLPIALIACG 214
+ S G +Y +G N GQ+G I S + ++ L + IA I G
Sbjct: 308 AFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEHCTIAKIHSG 367
Query: 215 ANHSFVLSKSVSRL 228
+H+F+L +V L
Sbjct: 368 GDHNFLLLSTVEGL 381
Score = 183 (69.5 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 75/280 (26%), Positives = 124/280 (44%)
Query: 19 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
WG GQLG+ +++ ASV ++C + + G HSL L
Sbjct: 5 WGSSGAGQLGIGASE-------------ASVFEPRSCCVFDGRGLKEVACGNQHSLFLLH 51
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
G V+T G ++ GQLG + K S P+ V L + + G +H L + G V
Sbjct: 52 DGSVYTCGSNSCGQLGHD----KGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFA 107
Query: 139 THKENG--CG-SDPSQGVQ-------------SNLVQDSHTTITSLNSPGELYTWGNNEY 182
+G G + V+ S ++ +H I +L+ G+L+ WG N
Sbjct: 108 WGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCI-ALSKDGQLFVWGENSS 166
Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
GQ+G+ + PQ ++SL +P+ I+ G +HSF LS S ++ +G SA QL +
Sbjct: 167 GQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFS-GAVFGWGKNSAGQLGLN 225
Query: 242 PKSVHKTPQLIHGPWIASP--VAMTAGED--SLVSHSGGL 277
+ P H ++ S V ++ GE+ + ++ GGL
Sbjct: 226 DEQDRAVP--CHIKFLRSQKVVYISCGEEHTAALTKEGGL 263
Score = 128 (50.1 bits), Expect = 5.5e-56, Sum P(4) = 5.5e-56
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF +Y E+ +WFS+ F + N + LIG +CGLAIYN TV
Sbjct: 760 YGMFTQYSESNLLWFSDKCFVEHNWFHLIGIICGLAIYNSTV 801
Score = 125 (49.1 bits), Expect = 7.6e-75, Sum P(3) = 7.6e-75
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 424 SPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASH 483
S C N SFL +D HF N K PG+D + ++T+ + + L+ + +
Sbjct: 429 STACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFETLMK---PAFARLLEQIT-KSFE 484
Query: 484 AHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ L+ L +PPD EA+R++L L F + + + L +P A A+
Sbjct: 485 SLLIPQLPCSPPDVEAMRIYLILSECPAFQDSKNYITLTIPLAMAI 530
Score = 119 (46.9 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 39/98 (39%), Positives = 52/98 (53%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSL L G V+T G ++ GQLG + K S P+ V L + Q +G S C
Sbjct: 42 GNQHSLFLLHDGSVYTCGSNSCGQLGHD----KGGSRPELVGALDA----QKISGVS-C- 91
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADK 100
G HSLA+N+ G+VF WG GQLGL +A++
Sbjct: 92 ------GQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEE 123
Score = 105 (42.0 bits), Expect = 5.5e-56, Sum P(4) = 5.5e-56
Identities = 49/204 (24%), Positives = 84/204 (41%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
NW+ LM F RL+ ++K +++LL + + S L++L+KL+ +N
Sbjct: 543 NWWSLMDCTVFTRLVEMYKSIVVFLLTGGKALLMP---VFLESYTSAALRLLEKLHKVNL 599
Query: 875 ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
+ + + +I T V Y+ DI++ Y + G
Sbjct: 600 KA--HRVEYNHFYIPDIAT-------LVDIQEDYLKWFLRKADIKMRYPP-VQGSVTLCA 649
Query: 935 RDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRD 994
F+ N T E+ ++ + A N N ++ L N +L + V R+
Sbjct: 650 YPFILNAQA--KTTVLQTDAELQMQMAVSGA-NLHNVFMLLTMEPLLARNPFLVLHVRRN 706
Query: 995 NIVEDTIRELAQYTTNDFKKPLKV 1018
++V D +REL Y D KKPLKV
Sbjct: 707 HLVSDALRELTIYNDVDLKKPLKV 730
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 455 (165.2 bits), Expect = 1.4e-73, Sum P(3) = 1.4e-73
Identities = 127/392 (32%), Positives = 196/392 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+LALND G+V+ WG D+ GQLGL +++ + +P+ +K L+ + +VQ GY
Sbjct: 95 HTLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQIVQVACGY------- 146
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+HSLAL+ EVF WG + +GQLGL D K Q+ P+ +K L + +Q AG +
Sbjct: 147 -----YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAAGGA 200
Query: 126 HCLVLTSSGVVTC--THKENGCG-SDPSQGVQSNLVQDSHTT-----------ITSLNSP 171
H VLT SG + +K G +D + NL++ T +L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G ++T+G YGQ+G +NS + P++V L+ + IACG H+ S R+Y+F
Sbjct: 261 GGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 232 GIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
G+G QL + S K+P + G W P D + VK+I+SGGD S
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPPD--IDSEEYFCVKRIFSGGDQSF 375
Query: 291 VTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVF 350
+ + DDFR +P+ QI VN E L ++ + ++ ++ F
Sbjct: 376 SHYSNPQNCGPPDDFRCPDPSKQIWTVN-ETL--IQKWLSYPSG--RFPVEIANEIDGTF 430
Query: 351 LSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
S GC+NGSFL V ND+H+ +K FS + ++
Sbjct: 431 SSSGCLNGSFLAVSNDDHYRTGTK-FSGVDMN 461
Score = 378 (138.1 bits), Expect = 1.8e-73, Sum P(2) = 1.8e-73
Identities = 113/355 (31%), Positives = 184/355 (51%)
Query: 761 INMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDV-FGITFRNWYLL 819
++M L+ K++ +P Q + ++ +L K+L L PD+E + F +T L+
Sbjct: 458 VDMNAARLLFHKLI-QPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLM 516
Query: 820 MSDDYFERLILIFKQCLIYLLQQP-GVVD---STNGDITFNRKLSFCLQV---LQKLNSL 872
+ F + + F L+ L + P V++ S F + + +V L KL +
Sbjct: 517 SDSNNFTTIAIPFGTALVNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKI 576
Query: 873 N-----NETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
S + + + + G+ + Y FY+ ++ + DIR DY W+
Sbjct: 577 GIPPSERRIFNSFLHTALKVLEILHKVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQ 636
Query: 928 GRP------NGSTR--DF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQ 976
+ +G T D +C YPF+FDA+AKTTLL+ D +QM+ A++Q +
Sbjct: 637 QQAYGMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSS 696
Query: 977 TFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRG 1034
F P ++N L + V R+NIV D + L + D+KKPLKV I++ G
Sbjct: 697 LFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV-----IFV-------G 744
Query: 1035 EEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
E+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 745 EDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 799
Score = 275 (101.9 bits), Expect = 1.4e-73, Sum P(3) = 1.4e-73
Identities = 52/101 (51%), Positives = 73/101 (72%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L + L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 864
Score = 226 (84.6 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 77/264 (29%), Positives = 126/264 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL---ESADKKSQSIPKRVKGLASVSVVQ 119
+LALND G+V+ WG D+ GQLGL E + ++I K + + V V
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI-KSLSDIQIVQV-- 142
Query: 120 ACAGYSHCLVLTSSGVVTC---THKENGCGSDPSQGVQSNLVQD-------------SHT 163
AC Y + +S V + + G G D + L++ +H+
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHS 202
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ +L+ G ++ WG N++GQ+G+N+ N P ++SL I I CG +H+ L+K
Sbjct: 203 FVLTLS--GAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLRTQKIVYICCGEDHTAALTK 259
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHK 247
++ FG G QL + H+
Sbjct: 260 E-GGVFTFGAGGYGQLGHNSTSHE 282
Score = 204 (76.9 bits), Expect = 2.8e-46, Sum P(3) = 2.8e-46
Identities = 76/277 (27%), Positives = 123/277 (44%)
Query: 19 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
WG + GQLGL D++ P++ + V G C GL H++ + D
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV--G---C-------GLRHTVFVLD 51
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
G V+T G + GQLG E + KK P++V L + ++V G +H L L G V
Sbjct: 52 DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYA 107
Query: 139 THKENG-----CGSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNNEYG 183
++ GS+ V N+ S I +L+ E++ WG N+YG
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SP 242
Q+G+ PQ ++SL+ +P +A G HSFVL+ S ++ +G QL +
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLND 226
Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 165 (63.1 bits), Expect = 4.7e-62, Sum P(3) = 4.7e-62
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWF-SEDTFED----QNMYFLIGKEYVPCTY 1097
VRRE ++ E+L + +Y++ + F ED + + + LI +E +
Sbjct: 713 VRRENIVGDAMEVLRKTKNI--DYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLD--- 767
Query: 1098 ISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MF+ YE++R IWFS+ TFED +++ LIG +CGLAIYN+T+
Sbjct: 768 -PKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTI 811
Score = 153 (58.9 bits), Expect = 1.4e-73, Sum P(3) = 1.4e-73
Identities = 37/112 (33%), Positives = 58/112 (51%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL V ND+H+ +K GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
A L + L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 ASLEKN--LIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 451 (163.8 bits), Expect = 6.4e-73, Sum P(2) = 6.4e-73
Identities = 128/394 (32%), Positives = 197/394 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+LALND G+V+ WG D+ GQLGL +++ + +P+ +K L+ + +VQ GY
Sbjct: 95 HTLALNDKGQVYAWGLDSDGQLGLVGSEECIR-VPRNIKSLSDIQIVQVACGY------- 146
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+HSLAL+ EVF WG + +GQLGL D K Q+ P+ +K L + +Q AG +
Sbjct: 147 -----YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 126 HCLVLTSSGVVTC--THKENGCG-SDPSQGVQSNLVQ-------------DSHTTITSLN 169
H VLT SG + +K G +D + NL++ + HT +L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA--ALT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G YGQ+G +NS + P++V L+ + IACG H+ S R+Y
Sbjct: 259 KEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIY 317
Query: 230 AFGIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
+FG+G QL + S K+P + G W P D + VK+I+SGGD
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVKGNWY--PYNGQCLPD--IDSEEYFCVKRIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
S + + DDFR NP QI VN E L ++ + ++ ++
Sbjct: 374 SFSHYSSPQNCGPPDDFRCPNPTKQIWTVN-EAL--IQKWLSYPSG--RFPVEIANEIDG 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
F S GC+NGSFL V ND+H+ ++ FS + ++
Sbjct: 429 TFSSSGCLNGSFLAVSNDDHYRTGTR-FSGVDMN 461
Score = 377 (137.8 bits), Expect = 6.4e-73, Sum P(2) = 6.4e-73
Identities = 113/355 (31%), Positives = 184/355 (51%)
Query: 761 INMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDV-FGITFRNWYLL 819
++M L+ K++ +P Q + ++ +L K+L L PD+E + F +T L+
Sbjct: 458 VDMNAARLLFHKLI-QPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLM 516
Query: 820 MSDDYFERLILIFKQCLIYLLQQP-GVVD---STNGDITFNRKLSFCLQV---LQKLNSL 872
+ F + + F L+ L + P V++ S F + + +V L KL +
Sbjct: 517 SDSNNFTTIAIPFGTALVNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKI 576
Query: 873 N-----NETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
S + + + + G+ + Y FY+ ++ + DIR DY W+
Sbjct: 577 GIPPSERRIFNSFLHTALKVLEILHRVNEKMGQIIQYDKFYIHEVQELIDIRNDYINWVQ 636
Query: 928 GRP------NGSTR--DF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQ 976
+ +G T D +C YPF+FDA+AKTTLL+ D +QM+ A++Q +
Sbjct: 637 QQAYGMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSS 696
Query: 977 TFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRG 1034
F P ++N L + V R+NIV D + L + D+KKPLKV I++ G
Sbjct: 697 LFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV-----IFV-------G 744
Query: 1035 EEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
E+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 745 EDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 799
Score = 272 (100.8 bits), Expect = 1.7e-72, Sum P(3) = 1.7e-72
Identities = 52/101 (51%), Positives = 72/101 (71%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 823
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L + L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864
Score = 228 (85.3 bits), Expect = 3.9e-48, Sum P(3) = 3.9e-48
Identities = 77/264 (29%), Positives = 128/264 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL---ESADKKSQSIPKRVKGLASVSVVQ 119
+LALND G+V+ WG D+ GQLGL E + ++I K + + V V
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI-KSLSDIQIVQV-- 142
Query: 120 ACAGYSHCLVLTSSGVVTC---THKENGCGSDPSQGVQSNLVQD-------------SHT 163
AC Y + +S V + + G G+D + L++ +H+
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHS 202
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ +L+ G ++ WG N++GQ+G+N+ N P ++SL + I I CG +H+ L+K
Sbjct: 203 FVLTLS--GAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLRSQKIVYICCGEDHTAALTK 259
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHK 247
++ FG G QL + H+
Sbjct: 260 E-GGVFTFGAGGYGQLGHNSTSHE 282
Score = 215 (80.7 bits), Expect = 8.8e-47, Sum P(3) = 8.8e-47
Identities = 65/206 (31%), Positives = 98/206 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSLAL+ EVF WG + +GQLGL D K Q+ P+ +K L + +Q AG +H
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSF 203
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
VLT + G +F WG + GQLGL D+ + +P +K L S +V C
Sbjct: 204 VLTLS------------GAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICC 249
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPSQ--GVQSNLVQD-----SHTTI 165
G H LT G V T G G +P + + ++V + HT+
Sbjct: 250 GEDHTAALTKEGGVF-TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS- 307
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSN 191
+ S G +Y++G GQ+G +++
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTS 333
Score = 208 (78.3 bits), Expect = 4.8e-46, Sum P(3) = 4.8e-46
Identities = 77/277 (27%), Positives = 124/277 (44%)
Query: 19 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
WG + GQLGL D++ P++ + V G C GL H++ + D
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDV--G---C-------GLRHTVFVLD 51
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
G V+T G + GQLG E + KK P++V L + ++V G +H L L G V
Sbjct: 52 DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYA 107
Query: 139 THKENG-----CGSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNNEYG 183
++ GS+ V N+ S I +L+ E++ WG N+YG
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SP 242
Q+G+ T PQ ++SL+ +P +A G HSFVL+ S ++ +G QL +
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLND 226
Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 160 (61.4 bits), Expect = 8.9e-61, Sum P(3) = 8.9e-61
Identities = 39/105 (37%), Positives = 61/105 (58%)
Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWF-SEDTFED----QNMYFLIGKEYVPCTY 1097
VRRE ++ E+L + +Y++ + F ED + + + LI +E +
Sbjct: 713 VRRENIVGDAMEVLRKTKNI--DYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLD--- 767
Query: 1098 ISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MF+ YE++R IWFS+ TFED +++ LIG +CGLAIYN T+
Sbjct: 768 -PKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTI 811
Score = 150 (57.9 bits), Expect = 1.7e-72, Sum P(3) = 1.7e-72
Identities = 36/112 (32%), Positives = 58/112 (51%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL V ND+H+ ++ GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
A L + L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 ASLEKN--LIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 447 (162.4 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 126/392 (32%), Positives = 195/392 (49%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+LALND G+V+ WG D+ GQLGL +++ + +P+ +K L+ + +VQ GY
Sbjct: 95 HTLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQIVQVACGY------- 146
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+HSLAL+ EVF WG + +GQLGL D K Q+ P+ +K L + +Q AG +
Sbjct: 147 -----YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQIAAGGA 200
Query: 126 HCLVLTSSGVVTC--THKENGCG-SDPSQGVQSNLVQDSHTT-----------ITSLNSP 171
H VLT SG + +K G +D + NL++ T +L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G ++T+G YGQ+G +NS + P++V L+ + IACG H+ S R+Y+F
Sbjct: 261 GGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 232 GIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
G+G QL + S K+P + G W DS VK+I+SGGD S
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDS----EEYFCVKRIFSGGDQSF 375
Query: 291 VTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVF 350
+ + DDFR +P+ QI VN E L ++ + ++ ++ F
Sbjct: 376 SHYSNPQNCGPPDDFRYPDPSKQIWTVN-EAL--IQKWLSYPSG--RFPVEIANEIDGTF 430
Query: 351 LSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
S GC+NGSFL V ND+H+ ++ FS + ++
Sbjct: 431 SSSGCLNGSFLAVSNDDHYRTGTR-FSGVDMN 461
Score = 378 (138.1 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 113/355 (31%), Positives = 184/355 (51%)
Query: 761 INMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDV-FGITFRNWYLL 819
++M L+ K++ +P Q + ++ +L K+L L PD+E + F +T L+
Sbjct: 458 VDMNAARLLFHKLI-QPDHPQIAQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLM 516
Query: 820 MSDDYFERLILIFKQCLIYLLQQP-GVVD---STNGDITFNRKLSFCLQV---LQKLNSL 872
+ F + + F L+ L + P V++ S F + + +V L KL +
Sbjct: 517 SDSNNFTTIAIPFGTALVNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKI 576
Query: 873 N-----NETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
S + + + + G+ + Y FY+ ++ + DIR DY W+
Sbjct: 577 GIPPSERRIFNSFLHTALKVLEILHRVNEKSGQIIQYDKFYIHEVQELIDIRNDYIIWVQ 636
Query: 928 GRP------NGSTR--DF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQ 976
+ +G T D +C YPF+FDA+AKTTLL+ D +QM+ A++Q +
Sbjct: 637 QQAYGMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSS 696
Query: 977 TFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRG 1034
F P ++N L + V R+NIV D + L + D+KKPLKV I++ G
Sbjct: 697 LFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV-----IFV-------G 744
Query: 1035 EEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
E+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 745 EDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 799
Score = 277 (102.6 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
Identities = 52/101 (51%), Positives = 74/101 (73%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L + L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLEDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 864
Score = 226 (84.6 bits), Expect = 1.8e-48, Sum P(3) = 1.8e-48
Identities = 77/264 (29%), Positives = 126/264 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL---ESADKKSQSIPKRVKGLASVSVVQ 119
+LALND G+V+ WG D+ GQLGL E + ++I K + + V V
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI-KSLSDIQIVQV-- 142
Query: 120 ACAGYSHCLVLTSSGVVTC---THKENGCGSDPSQGVQSNLVQD-------------SHT 163
AC Y + +S V + + G G D + L++ +H+
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHS 202
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ +L+ G ++ WG N++GQ+G+N+ N P ++SL I I CG +H+ L+K
Sbjct: 203 FVLTLS--GAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLRTQKIVYICCGEDHTAALTK 259
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHK 247
++ FG G QL + H+
Sbjct: 260 E-GGVFTFGAGGYGQLGHNSTSHE 282
Score = 205 (77.2 bits), Expect = 2.8e-46, Sum P(3) = 2.8e-46
Identities = 77/277 (27%), Positives = 123/277 (44%)
Query: 19 WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
WG + GQLGL D++ P++ + V G C GL H++ + D
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV--G---C-------GLRHTVFVLD 51
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
G V+T G + GQLG E + KK P++V L + ++V G +H L L G V
Sbjct: 52 DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYA 107
Query: 139 THKENG-----CGSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNNEYG 183
++ GS+ V N+ S I +L+ E++ WG N+YG
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SP 242
Q+G+ PQ ++SL+ +P IA G HSFVL+ S ++ +G QL +
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLND 226
Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 165 (63.1 bits), Expect = 7.5e-61, Sum P(3) = 7.5e-61
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWF-SEDTFED----QNMYFLIGKEYVPCTY 1097
VRRE ++ E+L + +Y++ + F ED + + + LI +E +
Sbjct: 713 VRRENIVGDAMEVLRKTKNI--DYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLD--- 767
Query: 1098 ISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MF+ YE++R IWFS+ TFED +++ LIG +CGLAIYN+T+
Sbjct: 768 -PKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTI 811
Score = 150 (57.9 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
Identities = 36/112 (32%), Positives = 58/112 (51%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL V ND+H+ ++ GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQIAQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
A L + L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 ASLEKN--LIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 362 (132.5 bits), Expect = 2.8e-63, Sum P(4) = 2.8e-63
Identities = 82/200 (41%), Positives = 116/200 (58%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF-------LCNYPFIFDAKAKTT 952
+ V Y FY+P+++ + DI+ DY W + TR LC+YPFIFDA+AKT
Sbjct: 420 KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKTRPSIIQDTVTLCSYPFIFDAQAKTK 479
Query: 953 LLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYTT 1009
+L+ D +QM+ A+N N L T P +L + V R+N+V D +REL+ ++
Sbjct: 480 MLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHSD 539
Query: 1010 NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEET 1069
D KKPLKV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y+++
Sbjct: 540 IDLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDS 587
Query: 1070 RSIWFSEDTFEDQNMYFLIG 1089
+WFS+ F + N + LIG
Sbjct: 588 NLLWFSDTCFVEHNWFHLIG 607
Score = 252 (93.8 bits), Expect = 2.8e-63, Sum P(4) = 2.8e-63
Identities = 65/216 (30%), Positives = 107/216 (49%)
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
+ HT + L G ++T+G GQ+G ++ N V P+RV L+ + IACG H+
Sbjct: 66 EEHTAV--LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTL 122
Query: 220 VLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
S +YAFG G+ QL + + + K P + G W A ++A D H +
Sbjct: 123 AFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----I 178
Query: 279 VKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETL 338
VK+I+SGGD + V +K + + DFR +N A +N E + +++ + + T+
Sbjct: 179 VKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTM 238
Query: 339 DQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
+ + + S C NGSFL+ + DEHF + K
Sbjct: 239 NG-----VVQILSSAACWNGSFLEKKIDEHFKTSPK 269
Score = 247 (92.0 bits), Expect = 6.4e-48, Sum P(3) = 6.4e-48
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 578 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 637
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ++LDY D+E+ F + F
Sbjct: 638 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 672
Score = 146 (56.5 bits), Expect = 2.8e-63, Sum P(4) = 2.8e-63
Identities = 32/109 (29%), Positives = 59/109 (54%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + S S++ +
Sbjct: 244 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 299
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + + + + L +P A A+
Sbjct: 300 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 348
Score = 144 (55.7 bits), Expect = 4.7e-52, Sum P(4) = 4.7e-52
Identities = 56/173 (32%), Positives = 75/173 (43%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G VF WG + GQLGL +D++ + P VK L + VV G H VLT + G
Sbjct: 24 GAVFGWGMNNAGQLGL--SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG---- 77
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT-S 132
VFT+G + GQLG +S + + P+RV L V Q G H L S
Sbjct: 78 --------VFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIACGRQHTLAFVPS 127
Query: 133 SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
SG++ GCG+ G HT SP + Y W + GQ+
Sbjct: 128 SGLIYAF----GCGAKGQLGT-------GHTCNVKCPSPVKGY-WAAHS-GQL 167
Score = 120 (47.3 bits), Expect = 2.8e-37, Sum P(4) = 2.8e-37
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y+++ +WFS+ F + N + LIG CGLAIYN TV
Sbjct: 578 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTV 619
Score = 109 (43.4 bits), Expect = 2.0e-48, Sum P(4) = 2.0e-48
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
+ S + G ++ WG N GQ+G+++ + P V+ L + I+CG H+ VL+KS
Sbjct: 17 LPSQPAEGAVFGWGMNNAGQLGLSDEEDRES-PCHVKLLRTQKVVYISCGEEHTAVLTKS 75
Query: 225 VSRLYAFGIGSAVQL 239
++ FG GS QL
Sbjct: 76 -GGVFTFGAGSCGQL 89
Score = 105 (42.0 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 41/135 (30%), Positives = 60/135 (44%)
Query: 80 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT 139
G VF WG + GQLGL +D++ + P VK L + VV G H VLT SG V T
Sbjct: 24 GAVFGWGMNNAGQLGL--SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF-T 80
Query: 140 HKENGCGS----------DPSQGVQ---SNLVQDS---HTTITSLNSPGELYTWGNNEYG 183
CG +P + ++ S + Q + T+ + S G +Y +G G
Sbjct: 81 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKG 140
Query: 184 QMGINNS-NTTVTKP 197
Q+G ++ N P
Sbjct: 141 QLGTGHTCNVKCPSP 155
Score = 99 (39.9 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 52/197 (26%), Positives = 77/197 (39%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ L G VFT+G + GQLG +S + + P+RV L V Q G H L
Sbjct: 68 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIACGRQHTLAFV 125
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG-- 123
++GL ++ +G GQLG + + P VKG + Q A
Sbjct: 126 PSSGL-----------IYAFGCGAKGQLG--TGHTCNVKCPSPVKGYWAAHSGQLSARAD 172
Query: 124 -YSHCLV--LTSSG---VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTW 177
+ + +V + S G V C+ EN S P+ V + +H TSL + + W
Sbjct: 173 RFKYHIVKQIFSGGDQTFVLCSKYEN---SSPA--VDFRTMNQAH--YTSLINDETIAVW 225
Query: 178 GNNEYGQMGINNSNTTV 194
N N V
Sbjct: 226 RQKLSEHNNANTMNGVV 242
Score = 70 (29.7 bits), Expect = 2.8e-63, Sum P(4) = 2.8e-63
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLN 873
NW+ + YF +L+ ++K ++YLL+ + FN ++ L++L+KL +N
Sbjct: 361 NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVN 416
Score = 43 (20.2 bits), Expect = 8.8e-38, Sum P(4) = 8.8e-38
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 516 RQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
RQH + +P +G + AF G L G GH
Sbjct: 118 RQHTLAFVPSSGLIYAFGCGAKGQL----GTGH 146
>UNIPROTKB|F1NCH2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02028016 IPI:IPI00581887
Ensembl:ENSGALT00000006138 ArrayExpress:F1NCH2 Uniprot:F1NCH2
Length = 757
Score = 403 (146.9 bits), Expect = 7.6e-49, Sum P(3) = 7.6e-49
Identities = 86/196 (43%), Positives = 123/196 (62%)
Query: 899 GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF---LCNYPFIFDAKAKTTLLE 955
G+ + Y FY+ ++ + DIR DY W+ + G D +C YPF+FDA+AKTTLL+
Sbjct: 316 GQVIQYDRFYIHEIQDLIDIRNDYVNWVQQQVFGMLTDMPVTICTYPFVFDAQAKTTLLQ 375
Query: 956 MDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFK 1013
D +QM+ A++Q + F P ++N L + V RDNIV D + L + D+K
Sbjct: 376 TDAVMQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGDAVEVLRKTKNVDYK 435
Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
KPLKV I++ GEEA D GGVR+EF +L+++E+LDPKYGMF+ YEE+R IW
Sbjct: 436 KPLKV-----IFV-------GEEAVDVGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIW 483
Query: 1074 FSEDTFEDQNMYFLIG 1089
FS+ TFED +++ LIG
Sbjct: 484 FSDKTFEDSDLFHLIG 499
Score = 277 (102.6 bits), Expect = 4.9e-34, Sum P(2) = 4.9e-34
Identities = 52/101 (51%), Positives = 73/101 (72%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YEE+R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 468 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKK 523
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L++ L DLK+L P + + +Q +LDY E D+E+ F + F
Sbjct: 524 LLNKKPSLDDLKELMPDVGRGMQQLLDYPEDDIEEAFCLNF 564
Score = 183 (69.5 bits), Expect = 7.6e-49, Sum P(3) = 7.6e-49
Identities = 54/178 (30%), Positives = 85/178 (47%)
Query: 208 IALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAG 266
+ I CG H+ S R+Y+FG+G QL + S K+P + G W+
Sbjct: 5 VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIP 64
Query: 267 EDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECE 326
DS + VK+I+SGGD S + V DDFR + QI VN E
Sbjct: 65 ADSEQYYC----VKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVN-------E 113
Query: 327 REVEQLKSDET--LDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
+++L + + L ++ ++ F S GC+NGSFL + ND+H+ S +FS + ++
Sbjct: 114 TFIQRLLTFPSGRLPVEIANEIDGTFSSAGCLNGSFLALSNDDHYK-TSVRFSGVDMN 170
Score = 163 (62.4 bits), Expect = 2.8e-22, Sum P(3) = 2.8e-22
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 1100 KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
KY MF+ YEE+R IWFS+ TFED +++ LIG +CGLAIYN+T+
Sbjct: 469 KYGMFRYYEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTI 511
Score = 146 (56.5 bits), Expect = 2.4e-46, Sum P(4) = 2.4e-46
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL + ND+H+ + + GVDM + + + + + + V+
Sbjct: 135 IDGTFSSAGCLNGSFLALSNDDHYKTSVRFSGVDMNAARLLFHKLIQPDHAHISQQVA-- 192
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
A L + L+ L ++ PD EALR++LTLP + L +PF A+
Sbjct: 193 ASLEKN--LIPKLSSSLPDVEALRLYLTLPECPLMSDANNFTTLAIPFGTAI 242
Score = 54 (24.1 bits), Expect = 2.4e-46, Sum P(4) = 2.4e-46
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 62 LVLTSTTGLWHSLA-LNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKG 111
LV T G H+ A + G ++++G +GQLG ++++KS P VKG
Sbjct: 4 LVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKS---PFTVKG 52
Score = 53 (23.7 bits), Expect = 7.6e-49, Sum P(3) = 7.6e-49
Identities = 13/59 (22%), Positives = 32/59 (54%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQ--QPGVVDSTNGDITFNRKLSF-CLQVLQKLN 870
NW+ ++ F +++ ++K +++LL+ + G+ S T +F L++L ++N
Sbjct: 255 NWWSVLEPPLFLKIVELYKDVVVHLLKLYKIGIPPSERRIFTNFLHTAFRVLEILHRVN 313
Score = 46 (21.3 bits), Expect = 1.6e-45, Sum P(4) = 1.6e-45
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 3 GLWHSLA-LNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKG 45
G H+ A + G ++++G +GQLG ++++KS P VKG
Sbjct: 11 GRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKS---PFTVKG 52
Score = 45 (20.9 bits), Expect = 2.0e-45, Sum P(4) = 2.0e-45
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSN 191
HTT + S G +Y++G GQ+G ++
Sbjct: 14 HTT-AFVPSSGRIYSFGLGGNGQLGTGTTS 42
Score = 37 (18.1 bits), Expect = 4.3e-35, Sum P(4) = 4.3e-35
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTL 750
YP+N + + + IW +TF + + F G L
Sbjct: 89 YPQNMVPPDDFRYPDLLKQIWTVNETFIQRLLTFPSGRL 127
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 262 (97.3 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 84/265 (31%), Positives = 126/265 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++++ D G VF WG + HGQLG+ES Q P+RV+ + + VQ +G +HC+
Sbjct: 102 GRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTW-QGTPRRVQEINDI--VQVASGSNHCI 158
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
AL++ G VF WG E AD + P+ V+ L+ V +V+ A
Sbjct: 159 ------------ALDEGGRVFVWG---------EQADGRCIHRPEPVEQLSGVPIVRVLA 197
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSD---PSQGVQS-------NLVQ----DSHTTIT 166
G HCL L++SG V T +G G D P VQ +V+ D+HT +
Sbjct: 198 GARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVL- 256
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
L G +++G++ GQ G T P V L+ + IA GA H+ + K
Sbjct: 257 -LTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICKGAP 315
Query: 227 RLYAFGIGSAVQLDSPKSV-HKTPQ 250
Y FG+ S+ QL + K + TP+
Sbjct: 316 --YPFGLNSSGQLGNGKIMTQSTPR 338
Score = 248 (92.4 bits), Expect = 6.3e-37, Sum P(4) = 6.3e-37
Identities = 78/252 (30%), Positives = 119/252 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L G++++ G + GQLG S + S SI V +S ++Q AG SH +
Sbjct: 49 GEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP-VSWTSSAKIIQISAGRSHTV 107
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G VF WG + HGQLG+ES Q P+RV+ + + VQ +
Sbjct: 108 SVT------------DDGRVFAWGSNEHGQLGMESKFTW-QGTPRRVQEINDI--VQVAS 152
Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPS-----QGVQSNLVQDSHTTITSLNSPGELY 175
G +HC+ L G V + +G C P GV V +L++ G ++
Sbjct: 153 GSNHCIALDEGGRVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVF 212
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
TWG N G++GI++ T Q V + L + ACG NH+ +L+ R ++FG +
Sbjct: 213 TWGQNNSGELGIDDLRPQ-TSVQHVHQMDGLGVVEAACGDNHTVLLTHC-GRTFSFGSDA 270
Query: 236 AVQLDSPKSVHK 247
Q K V K
Sbjct: 271 LGQCGFGKKVEK 282
Score = 245 (91.3 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 60/187 (32%), Positives = 106/187 (56%)
Query: 907 FYMPDLATVCDIRIDYFRWISGR-PNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHA 965
FY+ +L T D++++Y ++ + PN + D+ ++PF+ + AK L+ ++ + M+
Sbjct: 588 FYIDELNTSVDLKLEYVLELTRQDPNKTELDYWTHFPFLLNGVAKGELIFVEAWL-MQTL 646
Query: 966 MNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIY 1025
Q++ + L +LE+ V R+ IV DT+ ++A + +D +KPLKVN
Sbjct: 647 RRQSSLFNTAHGTIIFEL-PHLELTVRREFIVSDTMNQMAGLSESDLQKPLKVN------ 699
Query: 1026 LAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS--EDTFEDQN 1083
GE+A+DAGGVR+EF +L++++IL YGMF E EE+ +WFS F D+
Sbjct: 700 ------IAGEDADDAGGVRKEFFILVMRKILQSDYGMFSEDEESHLVWFSGLPSEFCDRE 753
Query: 1084 MYFLIGK 1090
+ +G+
Sbjct: 754 QFHQLGR 760
Score = 226 (84.6 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 48/113 (42%), Positives = 72/113 (63%)
Query: 720 YGI-TEYEETRSIWFS--EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE 776
YG+ +E EE+ +WFS F D+ +G L GL+IYN++I+ PFPLALYK +LD
Sbjct: 728 YGMFSEDEESHLVWFSGLPSEFCDREQFHQLGRLVGLSIYNHSIVPFPFPLALYKYLLDT 787
Query: 777 PILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
P L+DL +LSP+ K L+ +L Y E D+EDVFG+ F + ++ + + L+
Sbjct: 788 PPDLEDLCELSPSEGKGLKMLLSYEEDDVEDVFGLNFCISFNILGETHTTELL 840
Score = 152 (58.6 bits), Expect = 6.1e-27, Sum P(4) = 6.1e-27
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G H LAL+ G VFTWG + G+LG++ D + Q+ + V + + VV+A G +H
Sbjct: 196 LAGARHCLALSASGAVFTWGQNNSGELGID--DLRPQTSVQHVHQMDGLGVVEAACGDNH 253
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQ 119
++LT H CG F++G D GQ G + +K++ P V L V +
Sbjct: 254 TVLLT------H------CGRTFSFGSDALGQCGFGKKVEKRTN--PTAVSDLIGSHVTR 299
Query: 120 ACAGYSHCLVL 130
AG H + +
Sbjct: 300 IAAGACHTIAI 310
Score = 147 (56.8 bits), Expect = 2.0e-26, Sum P(4) = 2.0e-26
Identities = 64/238 (26%), Positives = 109/238 (45%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
E+ G GQLG+ ++ Q +P+R+ G + + + A V + T G H++
Sbjct: 4 ELLGCGHTGEGQLGVRLSESTIQ-VPERIIG--APNDMDGTA------VTSVTCGEQHTV 54
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
L G++++ G + GQLG S + S SI V +S ++Q AG SH + +T G
Sbjct: 55 FLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP-VSWTSSAKIIQISAGRSHTVSVTDDG 113
Query: 135 -VVTCTHKENG-CGSDPS---QG----VQ--SNLVQ--DSHTTITSLNSPGELYTWGNNE 181
V E+G G + QG VQ +++VQ +L+ G ++ WG
Sbjct: 114 RVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQA 173
Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
G+ + +P+ VE L +PI + GA H LS S ++ +G ++ +L
Sbjct: 174 DGRC--------IHRPEPVEQLSGVPIVRVLAGARHCLALSAS-GAVFTWGQNNSGEL 222
Score = 101 (40.6 bits), Expect = 9.6e-22, Sum P(4) = 9.6e-22
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G H +AL++ G VF WG E AD + P+ V+ L+ V +V+ AG HC
Sbjct: 152 SGSNHCIALDEGGRVFVWG---------EQADGRCIHRPEPVEQLSGVPIVRVLAGARHC 202
Query: 62 LVLTSTTGLWHSLALNDCGEV 82
L L S +G + N+ GE+
Sbjct: 203 LAL-SASGAVFTWGQNNSGEL 222
Score = 99 (39.9 bits), Expect = 3.1e-26, Sum P(4) = 3.1e-26
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 1099 SKYSMFKEYEETRSIWFS--EDTFEDQNMYFLIGTLCGLAIYNYT-VRFP 1145
S Y MF E EE+ +WFS F D+ + +G L GL+IYN++ V FP
Sbjct: 726 SDYGMFSEDEESHLVWFSGLPSEFCDREQFHQLGRLVGLSIYNHSIVPFP 775
Score = 76 (31.8 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 408 GDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFS---CNSKNPGVDMQLCQDCYDTIAR 464
GD + L +E+VF S MN SFL +++ ++ C ++ G+DM + +
Sbjct: 395 GDALEVMSL-IESVFSSLASMNMSFLY-KDERRYNVGFCFERSHGIDMDQVMEAFMLFDE 452
Query: 465 --IERESVRSLVSNLAILASHAHLVKSLWNTP-PDAEALRMFLTLP---LYHEFMNPRQH 518
++R+ + +V +L I W+ E LR+ L LP ++ E +N +
Sbjct: 453 YPMKRQYMELIVDSLKIAFQE-------WSENLKGIECLRVLLMLPWLPIFTENVNVQTI 505
Query: 519 EILHMPFAGAL 529
+ +H PF A+
Sbjct: 506 KNVHTPFVDAM 516
Score = 47 (21.6 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 816 WYLLMSDDYFERLILIFKQCLIYLLQ 841
W+ +S +F R++ +FK + +L+
Sbjct: 530 WWTQLSTRHFRRMVTVFKTAIKAMLK 555
Score = 44 (20.5 bits), Expect = 3.7e-35, Sum P(4) = 3.7e-35
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 330 EQLKS--DETLDQDLLLYLETVFLSPGCMNGSFL 361
E LK DE +++ +E+VF S MN SFL
Sbjct: 386 ESLKKLLDEGDALEVMSLIESVFSSLASMNMSFL 419
Score = 40 (19.1 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 486 LVKSLWNTPPDAEAL 500
L K L +TPPD E L
Sbjct: 780 LYKYLLDTPPDLEDL 794
Score = 39 (18.8 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 839 LLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGG--RTVSNIRTPAP 896
+L G S++ I K F L ++ L T ++ I G + I+ AP
Sbjct: 919 ILMYRGEYSSSHPTIQAFWKAFFALTDDERRKFLQFLTGSTRIPVSGWEELHAAIQPSAP 978
Query: 897 HGGRKVAYTAFYMPDLATVCD 917
VA+T F + DL + D
Sbjct: 979 ES-LPVAHTCFNLLDLPNIAD 998
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 262 (97.3 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 84/265 (31%), Positives = 126/265 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++++ D G VF WG + HGQLG+ES Q P+RV+ + + VQ +G +HC+
Sbjct: 102 GRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTW-QGTPRRVQEINDI--VQVASGSNHCI 158
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
AL++ G VF WG E AD + P+ V+ L+ V +V+ A
Sbjct: 159 ------------ALDEGGRVFVWG---------EQADGRCIHRPEPVEQLSGVPIVRVLA 197
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSD---PSQGVQS-------NLVQ----DSHTTIT 166
G HCL L++SG V T +G G D P VQ +V+ D+HT +
Sbjct: 198 GARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVL- 256
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
L G +++G++ GQ G T P V L+ + IA GA H+ + K
Sbjct: 257 -LTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICKGAP 315
Query: 227 RLYAFGIGSAVQLDSPKSV-HKTPQ 250
Y FG+ S+ QL + K + TP+
Sbjct: 316 --YPFGLNSSGQLGNGKIMTQSTPR 338
Score = 248 (92.4 bits), Expect = 6.3e-37, Sum P(4) = 6.3e-37
Identities = 78/252 (30%), Positives = 119/252 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L G++++ G + GQLG S + S SI V +S ++Q AG SH +
Sbjct: 49 GEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP-VSWTSSAKIIQISAGRSHTV 107
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G VF WG + HGQLG+ES Q P+RV+ + + VQ +
Sbjct: 108 SVT------------DDGRVFAWGSNEHGQLGMESKFTW-QGTPRRVQEINDI--VQVAS 152
Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPS-----QGVQSNLVQDSHTTITSLNSPGELY 175
G +HC+ L G V + +G C P GV V +L++ G ++
Sbjct: 153 GSNHCIALDEGGRVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVF 212
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
TWG N G++GI++ T Q V + L + ACG NH+ +L+ R ++FG +
Sbjct: 213 TWGQNNSGELGIDDLRPQ-TSVQHVHQMDGLGVVEAACGDNHTVLLTHC-GRTFSFGSDA 270
Query: 236 AVQLDSPKSVHK 247
Q K V K
Sbjct: 271 LGQCGFGKKVEK 282
Score = 245 (91.3 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 60/187 (32%), Positives = 106/187 (56%)
Query: 907 FYMPDLATVCDIRIDYFRWISGR-PNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHA 965
FY+ +L T D++++Y ++ + PN + D+ ++PF+ + AK L+ ++ + M+
Sbjct: 588 FYIDELNTSVDLKLEYVLELTRQDPNKTELDYWTHFPFLLNGVAKGELIFVEAWL-MQTL 646
Query: 966 MNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIY 1025
Q++ + L +LE+ V R+ IV DT+ ++A + +D +KPLKVN
Sbjct: 647 RRQSSLFNTAHGTIIFEL-PHLELTVRREFIVSDTMNQMAGLSESDLQKPLKVN------ 699
Query: 1026 LAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS--EDTFEDQN 1083
GE+A+DAGGVR+EF +L++++IL YGMF E EE+ +WFS F D+
Sbjct: 700 ------IAGEDADDAGGVRKEFFILVMRKILQSDYGMFSEDEESHLVWFSGLPSEFCDRE 753
Query: 1084 MYFLIGK 1090
+ +G+
Sbjct: 754 QFHQLGR 760
Score = 226 (84.6 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 48/113 (42%), Positives = 72/113 (63%)
Query: 720 YGI-TEYEETRSIWFS--EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE 776
YG+ +E EE+ +WFS F D+ +G L GL+IYN++I+ PFPLALYK +LD
Sbjct: 728 YGMFSEDEESHLVWFSGLPSEFCDREQFHQLGRLVGLSIYNHSIVPFPFPLALYKYLLDT 787
Query: 777 PILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
P L+DL +LSP+ K L+ +L Y E D+EDVFG+ F + ++ + + L+
Sbjct: 788 PPDLEDLCELSPSEGKGLKMLLSYEEDDVEDVFGLNFCISFNILGETHTTELL 840
Score = 152 (58.6 bits), Expect = 6.1e-27, Sum P(4) = 6.1e-27
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G H LAL+ G VFTWG + G+LG++ D + Q+ + V + + VV+A G +H
Sbjct: 196 LAGARHCLALSASGAVFTWGQNNSGELGID--DLRPQTSVQHVHQMDGLGVVEAACGDNH 253
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQ 119
++LT H CG F++G D GQ G + +K++ P V L V +
Sbjct: 254 TVLLT------H------CGRTFSFGSDALGQCGFGKKVEKRTN--PTAVSDLIGSHVTR 299
Query: 120 ACAGYSHCLVL 130
AG H + +
Sbjct: 300 IAAGACHTIAI 310
Score = 147 (56.8 bits), Expect = 2.0e-26, Sum P(4) = 2.0e-26
Identities = 64/238 (26%), Positives = 109/238 (45%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
E+ G GQLG+ ++ Q +P+R+ G + + + A V + T G H++
Sbjct: 4 ELLGCGHTGEGQLGVRLSESTIQ-VPERIIG--APNDMDGTA------VTSVTCGEQHTV 54
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
L G++++ G + GQLG S + S SI V +S ++Q AG SH + +T G
Sbjct: 55 FLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP-VSWTSSAKIIQISAGRSHTVSVTDDG 113
Query: 135 -VVTCTHKENG-CGSDPS---QG----VQ--SNLVQ--DSHTTITSLNSPGELYTWGNNE 181
V E+G G + QG VQ +++VQ +L+ G ++ WG
Sbjct: 114 RVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQA 173
Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
G+ + +P+ VE L +PI + GA H LS S ++ +G ++ +L
Sbjct: 174 DGRC--------IHRPEPVEQLSGVPIVRVLAGARHCLALSAS-GAVFTWGQNNSGEL 222
Score = 101 (40.6 bits), Expect = 9.6e-22, Sum P(4) = 9.6e-22
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G H +AL++ G VF WG E AD + P+ V+ L+ V +V+ AG HC
Sbjct: 152 SGSNHCIALDEGGRVFVWG---------EQADGRCIHRPEPVEQLSGVPIVRVLAGARHC 202
Query: 62 LVLTSTTGLWHSLALNDCGEV 82
L L S +G + N+ GE+
Sbjct: 203 LAL-SASGAVFTWGQNNSGEL 222
Score = 99 (39.9 bits), Expect = 3.1e-26, Sum P(4) = 3.1e-26
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 1099 SKYSMFKEYEETRSIWFS--EDTFEDQNMYFLIGTLCGLAIYNYT-VRFP 1145
S Y MF E EE+ +WFS F D+ + +G L GL+IYN++ V FP
Sbjct: 726 SDYGMFSEDEESHLVWFSGLPSEFCDREQFHQLGRLVGLSIYNHSIVPFP 775
Score = 76 (31.8 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 408 GDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFS---CNSKNPGVDMQLCQDCYDTIAR 464
GD + L +E+VF S MN SFL +++ ++ C ++ G+DM + +
Sbjct: 395 GDALEVMSL-IESVFSSLASMNMSFLY-KDERRYNVGFCFERSHGIDMDQVMEAFMLFDE 452
Query: 465 --IERESVRSLVSNLAILASHAHLVKSLWNTP-PDAEALRMFLTLP---LYHEFMNPRQH 518
++R+ + +V +L I W+ E LR+ L LP ++ E +N +
Sbjct: 453 YPMKRQYMELIVDSLKIAFQE-------WSENLKGIECLRVLLMLPWLPIFTENVNVQTI 505
Query: 519 EILHMPFAGAL 529
+ +H PF A+
Sbjct: 506 KNVHTPFVDAM 516
Score = 47 (21.6 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 816 WYLLMSDDYFERLILIFKQCLIYLLQ 841
W+ +S +F R++ +FK + +L+
Sbjct: 530 WWTQLSTRHFRRMVTVFKTAIKAMLK 555
Score = 44 (20.5 bits), Expect = 3.7e-35, Sum P(4) = 3.7e-35
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 330 EQLKS--DETLDQDLLLYLETVFLSPGCMNGSFL 361
E LK DE +++ +E+VF S MN SFL
Sbjct: 386 ESLKKLLDEGDALEVMSLIESVFSSLASMNMSFL 419
Score = 40 (19.1 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 486 LVKSLWNTPPDAEAL 500
L K L +TPPD E L
Sbjct: 780 LYKYLLDTPPDLEDL 794
Score = 39 (18.8 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 839 LLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGG--RTVSNIRTPAP 896
+L G S++ I K F L ++ L T ++ I G + I+ AP
Sbjct: 919 ILMYRGEYSSSHPTIQAFWKAFFALTDDERRKFLQFLTGSTRIPVSGWEELHAAIQPSAP 978
Query: 897 HGGRKVAYTAFYMPDLATVCD 917
VA+T F + DL + D
Sbjct: 979 ES-LPVAHTCFNLLDLPNIAD 998
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 265 (98.3 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 100/355 (28%), Positives = 167/355 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLA+ G VF WG + GQLG+ K+ PK++ L + ++Q G+
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEF-KEISFTPKKIMTLNDIKIIQVSCGH---- 137
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HSLAL+ +VF+WG ++HGQLGL + SQ+ P+RV+ L + + Q A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 123 GYSHCLVLT-----------SSGVVTCTHKENGCGSD-P-SQGVQSNL------VQDSHT 163
G +H L+ S+G + + + S+ P S G NL D+HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLS 222
+ L G+++T+G+N GQ+G S T + PQ VE + L ++ I CG+ H+
Sbjct: 249 AV--LTQDGKVFTFGDNRSGQLGY--SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYV 303
Query: 223 KSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI 282
+ ++ +FG G + D+ K H P+ + + S + + ED + + VK I
Sbjct: 304 HTTGQVVSFGHGPS---DTSKPTH--PEALTENFDIS--CLISAEDFV-----DVQVKHI 351
Query: 283 YSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSD 335
++G + VT + SS ++ +Q + + +K E E KS+
Sbjct: 352 FAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE 406
Score = 236 (88.1 bits), Expect = 2.7e-37, Sum P(3) = 2.7e-37
Identities = 96/344 (27%), Positives = 157/344 (45%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G HSL L V + G ++ GQLG A + +P+ ++ L ++ +V + C
Sbjct: 30 SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL-IVDLVS----C 82
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
G HSLA+ G VF WG + GQLG+ K+ PK++ L + ++Q
Sbjct: 83 -------GKEHSLAVCHKGRVFAWGAGSEGQLGIGEF-KEISFTPKKIMTLNDIKIIQVS 134
Query: 122 AGYSHCLVLTSSGVVTC----THKENGCGSD-PSQG----VQS----NLVQ----DSHTT 164
G+ H L L+ V +H + G G + PSQ V+S L Q +H+
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLS 222
SL G + WG+N GQ+ ++ N V KP V +L NL + I+CG H+ VL+
Sbjct: 195 ALSLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252
Query: 223 KSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG-PWIASPVAMTAGEDSLVSHSGGLVVK 280
+ +++ FG + QL SP + PQL+ + S + + H+ G VV
Sbjct: 253 QD-GKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVS 311
Query: 281 KIYSGGDHSIVTVTKSSDGVLSDDFRV--LNPATQILDVNFERL 322
+ D S T ++ L+++F + L A +DV + +
Sbjct: 312 FGHGPSDTSKPTHPEA----LTENFDISCLISAEDFVDVQVKHI 351
Score = 227 (85.0 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 46/99 (46%), Positives = 63/99 (63%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y E S +WF ++ FL G LCGL+++N + N+PFPLALYKK+LD+
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 792
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
L+DLK+LSP L KSLQ++LD D+ D I F +W
Sbjct: 793 SLEDLKELSPRLGKSLQEVLDDAADDIGDALCIRFSIHW 831
Score = 179 (68.1 bits), Expect = 2.4e-31, Sum P(3) = 2.4e-31
Identities = 57/199 (28%), Positives = 93/199 (46%)
Query: 56 AGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV 115
AG +L + +G HSL L V + G ++ GQLG A + +P+ ++ L ++
Sbjct: 18 AGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL 75
Query: 116 SVVQACAGYSHCLVLTSSGVVTC----THKENGCGS------DPSQGVQSN---LVQDS- 161
V G H L + G V + + G G P + + N ++Q S
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135
Query: 162 -HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
H +L+ ++++WG N +GQ+G+ + PQRV SL +P+A +A G HSF
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 195
Query: 221 LSKSVSRLYAFGIGSAVQL 239
LS + + +G SA QL
Sbjct: 196 LSLCGTS-FGWGSNSAGQL 213
Score = 161 (61.7 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 46/155 (29%), Positives = 75/155 (48%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
++PFIF++ +K LL+ D I+M+ M++ Y+ LQ + + + V R
Sbjct: 622 DFPFIFNSLSKIKLLQADSHIKMQ--MSEKKAYMLMHETILQKKDEFPPSPRFILRVRRS 679
Query: 995 NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
+V+D +R+L+Q DF K L V +F E ++GGV EF + +E
Sbjct: 680 RLVKDALRQLSQAEATDFCKVLVV------------EFINEICPESGGVSSEFFHCMFEE 727
Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+ P+YGMF E +WF ++ YFL G
Sbjct: 728 MTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFG 762
Score = 155 (59.6 bits), Expect = 7.4e-29, Sum P(3) = 7.4e-29
Identities = 78/317 (24%), Positives = 137/317 (43%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
++ + G +HSLAL+ +VF+WG ++HGQLGL + SQ+ P+RV+ L + + Q A
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
G +H L+ G + N G G + + ++ +L + G +Y
Sbjct: 189 GGAHSFALSLCGT-SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVY------- 240
Query: 183 GQMGINNSNTTV-TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
+ +++T V T+ +V + + + + V R+ G+ S + S
Sbjct: 241 --ISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID--GLVSQIDCGS 296
Query: 242 PKS---VHKTPQLI---HGPWIAS----PVAMTAGED--SLVSHSG--GLVVKKIYSGGD 287
+ VH T Q++ HGP S P A+T D L+S + VK I++G
Sbjct: 297 YHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTY 356
Query: 288 HSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
+ VT + SS ++ +Q + + +K E E KS+
Sbjct: 357 ANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE---------- 406
Query: 346 LETVFLSPGCMNGSFLQ 362
+ +F SP C+ SFL+
Sbjct: 407 IRMIFSSPACLTASFLK 423
Score = 132 (51.5 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 45/162 (27%), Positives = 73/162 (45%)
Query: 107 KRVKGLASVSVVQACAGYSHCLVL-TSSGVVTCTHKENG-CGSDPSQ-GVQSNLVQDSHT 163
+R G ++QA +G H L+L T+ V++C G G +Q G +Q T
Sbjct: 15 RRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALET 74
Query: 164 TITSLNS-----------PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIA 212
I L S G ++ WG GQ+GI P+++ +L ++ I ++
Sbjct: 75 LIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVS 134
Query: 213 CGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV--HKTPQLI 252
CG HS LSK S+++++G S QL K +PQ +
Sbjct: 135 CGHYHSLALSKD-SQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Score = 87 (35.7 bits), Expect = 1.5e-25, Sum P(4) = 1.5e-25
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 1088 IGKEYVPCTY--ISK--YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
+ E+ C + ++K Y MF E +WF ++ YFL G LCGL+++N V
Sbjct: 716 VSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNV 774
Score = 84 (34.6 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 27/112 (24%), Positives = 55/112 (49%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ +F SP C+ SFL+ + + + VD+++ +D + + + +E + S+++
Sbjct: 407 IRMIFSSPACLTASFLKKRG----TGETTSIDVDLEMARDTFKKLTK--KEWISSMITTC 460
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
L+++L P EAL +FL LP + + + L +PFA A+
Sbjct: 461 L----EDDLLRALPCHSPHQEALSVFLLLPECPVMHDSKNWKNLVVPFAKAV 508
Score = 41 (19.5 bits), Expect = 1.5e-25, Sum P(4) = 1.5e-25
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 964 HAMNQTNFYLFLQTFNPHTLNQYLEVEVSR 993
H +N+ N L TFN + L+ L + R
Sbjct: 570 HKVNKANCRLPENTFNINELSNLLNFYIDR 599
Score = 37 (18.1 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 615 FPCPSCYTLALMEPRST 631
F P+C T + ++ R T
Sbjct: 411 FSSPACLTASFLKKRGT 427
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 292 (107.8 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 81/259 (31%), Positives = 132/259 (50%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLA+ G VF WG + GQLG+ K++ IPK++K LA + ++Q G+
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEF-KETTFIPKKIKTLAGIKIIQVACGH---- 137
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HS+AL++ G+VF+WG ++HGQLGL + SQ+ P+RV+ L + + Q A
Sbjct: 138 --------YHSVALSEDGQVFSWGTNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 123 GYSHCLVLT-----------SSGVVTCT--------HKENGCGSDPSQGVQSNLVQDSHT 163
G H L+ S+G + + +K G+ + GV S HT
Sbjct: 189 GGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHT 248
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ L G+++T+G+N YGQ+G ++ PQ VE + L ++ I CG++H+
Sbjct: 249 AV--LTQDGKVFTFGDNSYGQLG-HDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIY 304
Query: 224 SVSRLYAFGIGSAVQLDSP 242
+ ++ +FG G SP
Sbjct: 305 TTGQVVSFGRGPGCASRSP 323
Score = 260 (96.6 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 130/518 (25%), Positives = 221/518 (42%)
Query: 53 QACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL 112
Q CAG + +L + +G HSL L G V + G ++ GQLG + + Q P+R+ L
Sbjct: 17 QVCAGGN--TLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ--PERIPAL 72
Query: 113 ASVSVVQACAGYSHCLVLTSSGVV----TCTHKENGCGSD------PSQ-----GVQSNL 157
+++V G H L + G V + + G G P + G++
Sbjct: 73 ETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQ 132
Query: 158 VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANH 217
V H +L+ G++++WG N +GQ+G+ + PQRV SL +P+A +A G +H
Sbjct: 133 VACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 218 SFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGL 277
SF LS S + + +G SA QL S + P + P ++ T G +VS S G
Sbjct: 193 SFALSLSGTS-FGWGSNSAGQL--ALSGNNAPVQRYKP-VSIGALKTLG---VVSISCGY 245
Query: 278 VVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET 337
+ + D + T +S G L D Q++ ER++ +++ SD T
Sbjct: 246 KHTAVLTQ-DGKVFTFGDNSYGQLGHDPTAEKRGPQLV----ERIEGLVSQID-CGSDHT 299
Query: 338 LDQDLLLYLETVF-LSPGCMNGSFLQVENDEHFSC--NSKKFSFIKLSLINWFMKLHFSI 394
L F PGC + S SC ++K + +++ I +F
Sbjct: 300 LAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVT 359
Query: 395 FGQGFGCVC------PTV--LGDCVPKSWLY--------------LETVFLSPGCMNGSF 432
Q P + + + + W+ + +F SP C+ SF
Sbjct: 360 TSQDTSSTSVPRKTLPEISRINQSLTEKWMAVAKRSIEDEVAKSEIRVIFSSPACLTASF 419
Query: 433 LQV-ENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLW 491
L+ E E S + VD+++ +D + + E+E + S+++ A L + L+ +L
Sbjct: 420 LKKREPGEMISID-----VDLEMARDTFKKLT--EKEWISSMIT--ACLKDN--LLGALP 468
Query: 492 NTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
EAL +FL LP ++ R + L +PFA A+
Sbjct: 469 CHSSHQEALSVFLLLPECPVMLDSRNYITLVVPFAEAI 506
Score = 226 (84.6 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 43/99 (43%), Positives = 67/99 (67%)
Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y EE +WF ++ M FL G LCGL++YN+ ++ +PFPLAL+KK+LD+
Sbjct: 728 YGMFMYPEEDSYMWFPVKPKFEKKMYFLFGMLCGLSLYNFNVVYLPFPLALFKKLLDQEP 787
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
L+DLK+LSP+ K LQ++L+ D+++ FG+ F +W
Sbjct: 788 SLEDLKELSPSFGKCLQEVLNDDVNDIKEEFGLRFSIHW 826
Score = 139 (54.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 43/153 (28%), Positives = 73/153 (47%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQM--EHAMNQTNFY-LFLQTFNPHTLNQYLEVEVSRDNI 996
++PF+F+ +K LL+ D +I++ N +F + LQ + L + V R ++
Sbjct: 620 DFPFVFNLMSKIKLLQADSQIRVLKSEVNNYMDFRGIILQRRDESPL---FTLSVRRSHL 676
Query: 997 VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
VED + +L+Q D +K L V +++ GE GV+ EF + + +
Sbjct: 677 VEDALCQLSQAEDTDLQKILVVE------FIKEIRSGGE------GVKSEFFHCIFESMT 724
Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+YGMF EE +WF ++ MYFL G
Sbjct: 725 KEEYGMFMYPEEDSYMWFPVKPKFEKKMYFLFG 757
Score = 105 (42.0 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 1088 IGKEYVPCTYIS----KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
+ E+ C + S +Y MF EE +WF ++ MYFL G LCGL++YN+ V
Sbjct: 711 VKSEFFHCIFESMTKEEYGMFMYPEEDSYMWFPVKPKFEKKMYFLFGMLCGLSLYNFNV 769
Score = 39 (18.8 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 504 LTLPLYHEFMNPRQHEILHMPFAGALPAFWIVVFGSLIGICGLGHLDF 551
+T Y FM P + + P +FG L CGL +F
Sbjct: 723 MTKEEYGMFMYPEEDSYMWFPVKPKFEKKMYFLFGML---CGLSLYNF 767
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 269 (99.8 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 80/249 (32%), Positives = 124/249 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLA+ G VF WG + GQLG K++ IP ++K L + + Q G+
Sbjct: 84 GKEHSLAVCHKGRVFAWGAGSEGQLGTGEF-KETNLIPMKIKTLNDIKIKQVSCGH---- 138
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HSLAL++ G+VF+WG ++ GQLGL SQ+ P+RV+ L + + Q A
Sbjct: 139 --------YHSLALSEGGQVFSWGSNSDGQLGL-GKKFPSQASPQRVRSLDGIPLAQVAA 189
Query: 123 GYSHCLVLTSSGVV----------TCTHKENGCGSD--P-SQGVQSNL--VQDS----HT 163
G +H L+ SG HK N G P S NL + S HT
Sbjct: 190 GGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHT 249
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ + N G+++T+G+N YGQ+G ++ + PQ VE + L ++ I CG+ H+
Sbjct: 250 VVLTQN--GKVFTFGDNTYGQLG-HSPTAEKSGPQLVEGIDGL-VSQIDCGSYHTLAYVY 305
Query: 224 SVSRLYAFG 232
+ ++ +FG
Sbjct: 306 TTGKVVSFG 314
Score = 248 (92.4 bits), Expect = 3.3e-36, Sum P(4) = 3.3e-36
Identities = 85/273 (31%), Positives = 134/273 (49%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G HSL L G+V + G + GQLG A +Q + +R++ L ++ V
Sbjct: 30 SGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQ-LKERIRALETLHVD--------- 79
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
LV + G HSLA+ G VF WG + GQLG K++ IP ++K L + + Q
Sbjct: 80 LV---SCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEF-KETNLIPMKIKTLNDIKIKQVS 135
Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSD-PSQG----VQS----NLVQ----DSHTT 164
G+ H L L+ G V + + + G G PSQ V+S L Q +H+
Sbjct: 136 CGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSF 195
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLS 222
SL+ G + WG N GQ+ ++ +N + KP + +L NL + I+CG H+ VL+
Sbjct: 196 ALSLS--GTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLT 253
Query: 223 KSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG 254
++ +++ FG + QL SP + PQL+ G
Sbjct: 254 QN-GKVFTFGDNTYGQLGHSPTAEKSGPQLVEG 285
Score = 213 (80.0 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 43/91 (47%), Positives = 59/91 (64%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y E S +WF + + FL G LCGL++YN N+PFPLAL+KK+LD+
Sbjct: 729 YGMFMYPEEGSYMWFPAKSKFKKKRYFLFGILCGLSLYNLNPANLPFPLALFKKLLDQKP 788
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
QDLK+LSP L K+LQ+ILD D E+++
Sbjct: 789 SFQDLKELSPLLGKNLQEILDNEADDTEELY 819
Score = 182 (69.1 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 63/216 (29%), Positives = 100/216 (46%)
Query: 39 IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
+ +R GL V + QA +G H L+L S G HS CG+ + GQLG A
Sbjct: 13 VSRRRVGLGGVELRQAASGERHSLLLLSN-GQVHS-----CGD------NGRGQLGQRGA 60
Query: 99 DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC----THKENGCGSD------ 148
+Q + +R++ L ++ V G H L + G V + + G G
Sbjct: 61 PCSAQ-LKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI 119
Query: 149 PSQ-----GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
P + ++ V H +L+ G++++WG+N GQ+G+ + PQRV SL
Sbjct: 120 PMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSL 179
Query: 204 VNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
+P+A +A G HSF LS S + + +G +A QL
Sbjct: 180 DGIPLAQVAAGGAHSFALSLSGTS-FGWGRNNAGQL 214
Score = 163 (62.4 bits), Expect = 2.8e-27, Sum P(4) = 2.8e-27
Identities = 48/147 (32%), Positives = 70/147 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLVL 64
HS AL+ G F WG + GQL L + QS P + L ++ V+ GY H +VL
Sbjct: 193 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVL 252
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-VSVVQACAG 123
T G+VFT+G +T+GQLG +KS P+ V+G+ VS + C
Sbjct: 253 TQN------------GKVFTFGDNTYGQLGHSPTAEKSG--PQLVEGIDGLVSQID-CGS 297
Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPS 150
Y + ++G V +E C S P+
Sbjct: 298 YHTLAYVYTTGKVVSFGREPTCKSSPT 324
Score = 155 (59.6 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 86/337 (25%), Positives = 139/337 (41%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
G +HSLAL++ G+VF+WG ++ GQLGL SQ+ P+RV+ L + + Q AG +H
Sbjct: 137 GHYHSLALSEGGQVFSWGSNSDGQLGL-GKKFPSQASPQRVRSLDGIPLAQVAAGGAHSF 195
Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT--TITSLNSPGELYTWGNNEYGQMG 186
L+ SG + N G ++N+ S+ +I++L + G +Y E+ +
Sbjct: 196 ALSLSGT-SFGWGRNNAGQLALH--KNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVL 252
Query: 187 INNSNTTVTKPQRVESLVNLPIA-----LIACGANH--SFVLSKSVSRL-YAFGIGSAVQ 238
N L + P A + G + S + S L Y + G V
Sbjct: 253 TQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVS 312
Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTA--GEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
+ +P H + V T D LV VK I++G + VT ++
Sbjct: 313 FGREPTCKSSPT--HPEALTENVDFTCLISADDLVDFQ----VKHIFAGTYANFVTTYQN 366
Query: 297 SDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
+ +D R + P I +N E L E ++ E ++ + +F SP C+
Sbjct: 367 TSS--TDVPRKILPG--ISQIN-ESLTEKWIAAKKRTECEVAKSEIAM----IFSSPACL 417
Query: 357 NGSFLQVENDEHFSCNS-----KKF--SFIKLSLINW 386
SFL+ E S KK +F KL+ W
Sbjct: 418 TASFLKKSQRESAETTSIDVDLKKARDTFKKLTETQW 454
Score = 134 (52.2 bits), Expect = 2.2e-30, Sum P(4) = 2.2e-30
Identities = 41/150 (27%), Positives = 71/150 (47%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVED 999
++PFIF +K LL+ + +++ + Q + + Q + L+ + + V R ++VED
Sbjct: 622 DFPFIFTLLSKIQLLQAESHLKILVYLKQKEYLPWGQVIPYNELHPFT-LRVRRRHLVED 680
Query: 1000 TIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPK 1059
+R+L+Q D K A V+F E GV+ EF + +E+ + +
Sbjct: 681 ALRQLSQAEDTDLHK------------AFMVEFIKEIRSIGYGVKSEFFYSIFEEMTNIE 728
Query: 1060 YGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
YGMF EE +WF + + YFL G
Sbjct: 729 YGMFMYPEEGSYMWFPAKSKFKKKRYFLFG 758
Score = 88 (36.0 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 1100 KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYN 1139
+Y MF EE +WF + + YFL G LCGL++YN
Sbjct: 728 EYGMFMYPEEGSYMWFPAKSKFKKKRYFLFGILCGLSLYN 767
Score = 82 (33.9 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 409 DC-VPKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIER 467
+C V KS + + +F SP C+ SFL+ E S + + VD++ +D + + E
Sbjct: 399 ECEVAKSEIAM--IFSSPACLTASFLKKSQRE--SAETTSIDVDLKKARDTFKKLT--ET 452
Query: 468 ESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAG 527
+ + +++ +L+++L EAL +FL LP +PR L +PFA
Sbjct: 453 QWISFVITTCL----KDNLLRALPCCSLHREALLVFLLLPECPVMHDPRNWMDLVVPFAE 508
Query: 528 AL 529
A+
Sbjct: 509 AV 510
Score = 39 (18.8 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 697 NSSVDVFPDFPIV 709
NSS +F DFP +
Sbjct: 614 NSSPIIFSDFPFI 626
Score = 39 (18.8 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 964 HAMNQTNFYLFLQTFN----PHTLNQYLEVEVSRDN 995
H +N N L TFN + LN Y E + DN
Sbjct: 572 HKVNTANCQLPENTFNINELSNLLNFYAERRLFMDN 607
Score = 37 (18.1 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 275 GGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREV-EQLK 333
GG+ +++ SG HS++ ++ D+ R Q+ +R C ++ E+++
Sbjct: 21 GGVELRQAASGERHSLLLLSNGQVHSCGDNGR-----GQL----GQRGAPCSAQLKERIR 71
Query: 334 SDETLDQDLL 343
+ ETL DL+
Sbjct: 72 ALETLHVDLV 81
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 270 (100.1 bits), Expect = 1.7e-38, Sum P(3) = 1.7e-38
Identities = 99/323 (30%), Positives = 157/323 (48%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
++ T G +HSLAL+ GE+F WG + HGQLG+ S + P+ V+ LA V + Q A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPS--QGVQSNLVQ-----DSHTTI 165
G +H + L+ SG + K N CG DPS +G+ + V+ SH+ +
Sbjct: 199 GEAHSMALSMSGNIYSWGK-NECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSAL 257
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
L G L+T+G ++GQ+G +NS +P V LV + IACG H+ +
Sbjct: 258 --LTQDGLLFTFGAGKHGQLG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYS 284
++++FG G QL + + QL+ P PV +++ E+ L SH+ + I +
Sbjct: 315 GKVFSFGSGKDGQLGNGGT---RDQLM--PL---PVKVSSSEELKLESHTSEKELIMI-A 365
Query: 285 GGDHSIVT-VTKSSDGV-LSDDFRVLNPATQ---ILDVNFERLKECEREVEQLKSDETLD 339
GG+ SI+ + K + V L LN T I DV +R + +RE+++
Sbjct: 366 GGNQSILLWIKKENSYVNLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQE-------- 417
Query: 340 QDLLLYLETVFLSPGCMNGSFLQ 362
+F SP C+ GSFL+
Sbjct: 418 ---------IFSSPACLTGSFLR 431
Score = 215 (80.7 bits), Expect = 1.7e-38, Sum P(3) = 1.7e-38
Identities = 46/100 (46%), Positives = 65/100 (65%)
Query: 720 YGITEYEETRS-IWFS-EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
YG+ Y E S +WF + FE + F G LCGL+++N + N+PFPLAL+KK+LD+
Sbjct: 742 YGMFMYPEGASCMWFPVKPKFEKKRY-FFFGVLCGLSLFNCNVANLPFPLALFKKLLDQM 800
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
L+DLK+LSP L K+LQ +LD + E+VF I F +W
Sbjct: 801 PSLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHFNVHW 840
Score = 189 (71.6 bits), Expect = 7.7e-30, Sum P(3) = 7.7e-30
Identities = 64/222 (28%), Positives = 106/222 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSLAL+ GE+F WG + HGQLG+ S + P+ V+ LA V + Q AG +H
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEAH-- 202
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S+AL+ G +++WG + GQLGL + K P ++GL + V
Sbjct: 203 ----------SMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFVAC 250
Query: 123 GYSHCLVLTSSGVVTC--THKENGCGSDPSQG-----VQSNLVQDSHT--------TITS 167
G SH +LT G++ K G + +Q + + LV T T+
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAY 310
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPI 208
++ G+++++G+ + GQ+G + + P +V S L +
Sbjct: 311 VSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKL 352
Score = 168 (64.2 bits), Expect = 7.4e-34, Sum P(4) = 7.4e-34
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQME---HAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNI 996
++PFIF+ +K LL D +++E H + + + + L ++ V R+++
Sbjct: 631 HFPFIFNNLSKIKLLHTDTLLKIESKKHKAYLRSAAIEEERESEFALRPTFDLTVRRNHL 690
Query: 997 VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
+ED + +L+Q+ D +K L V+ F GE D GGV++EF L E++
Sbjct: 691 IEDVLNQLSQFENEDLRKELWVS------------FSGEIGYDLGGVKKEFFYCLFAEMI 738
Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
P+YGMF E +WF ++ YF G
Sbjct: 739 QPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 771
Score = 153 (58.9 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGV--QSNLVQ---- 159
PK +K ++ + G H L+L+S G + + + + ++Q
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGK-PFEYDNYSMKHLRFESILQEKKIIQITCG 146
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
D H+ +L+ GEL+ WG N +GQ+G+ + T PQ VE L +P+A I+ G HS
Sbjct: 147 DYHSL--ALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSM 204
Query: 220 VLSKSVSRLYAFGIGSAVQLDSPKSVHKT-PQLIHG 254
LS S +Y++G QL + K P LI G
Sbjct: 205 ALSMS-GNIYSWGKNECGQLGLGHTESKDDPSLIEG 239
Score = 99 (39.9 bits), Expect = 8.7e-27, Sum P(4) = 8.7e-27
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG--KEYVPCTYIS----KYSMF 1104
L++++L+ + F+ + + +W S F + Y L G KE+ C + +Y MF
Sbjct: 690 LIEDVLN-QLSQFENEDLRKELWVS---FSGEIGYDLGGVKKEFFYCLFAEMIQPEYGMF 745
Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
E +WF ++ YF G LCGL+++N V
Sbjct: 746 MYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNV 783
Score = 72 (30.4 bits), Expect = 1.7e-38, Sum P(3) = 1.7e-38
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ +F SP C+ GSFL+ + +D+ ++ + + + + ++N+
Sbjct: 415 IQEIFSSPACLTGSFLRKRR----TTEMMPVYLDLNKARNIFKELTQ------KDWITNM 464
Query: 478 AILASHAHLVKSL-WNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFA 526
+L+K L +++PP EAL +F LP E L +PFA
Sbjct: 465 ITTCLKDNLLKRLPFHSPPQ-EALEIFFLLPECPMMHISNNWESLVVPFA 513
Score = 48 (22.0 bits), Expect = 7.4e-34, Sum P(4) = 7.4e-34
Identities = 14/69 (20%), Positives = 31/69 (44%)
Query: 805 LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
+ D + ++ + + F +L+ +FK +I L NG++ L+
Sbjct: 519 MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 572
Query: 865 VLQKLNSLN 873
+L+KL+ +N
Sbjct: 573 MLKKLHRVN 581
Score = 40 (19.1 bits), Expect = 3.6e-35, Sum P(3) = 3.6e-35
Identities = 10/52 (19%), Positives = 22/52 (42%)
Query: 612 QYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQFYVLQRDRTF 663
+ FF P C + + +L + + + LVL +++ ++ TF
Sbjct: 488 EIFFLLPECPMMHISNNWESLVVPFAKVVCKMSDQSSLVLEEYWATLQESTF 539
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 268 (99.4 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 104/352 (29%), Positives = 165/352 (46%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
++ T G +HSLAL+ GE+F WG + GQLG+ S S P+ V+ L+ V +VQ A
Sbjct: 150 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA-STSTPEIVENLSGVPLVQISA 208
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS----------DPS--QGVQSNLVQ-----DSHTTI 165
G +H + L+ SG V + N CG PS + + V+ HT +
Sbjct: 209 GEAHSMALSMSGNVYSWGR-NDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTAL 267
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
L G ++T+G+ +YGQ+G +NS +P+ V LV + IACG H+
Sbjct: 268 --LTKSGLVFTFGDGKYGQLG-HNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT 324
Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY-S 284
++++FG G QL + + + QLI P P+ + + E+ L S S V + I +
Sbjct: 325 GKVFSFGSGKEGQLGNGGTRN---QLI--P---RPMKLLSSEE-LKSESSTSVKELIMVA 375
Query: 285 GGDHSI-VTVTKSSDGV-LSDDFRVLNPATQ---ILDVNFERLKECEREVEQLKSDETLD 339
GG+ SI + + K + V L LN T I DV +R + +RE+ +
Sbjct: 376 GGNQSILIWMEKENSYVNLRRKIPTLNEGTVKRWIADVGTKRWQNTKREIRE-------- 427
Query: 340 QDLLLYLETVFLSPGCMNGSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
+F SP C+ GSFL+ D H N+ + +F +L+ +W
Sbjct: 428 ---------IFSSPACLTGSFLRERIDGKMISIHLDLNTARNTFKELTQKDW 470
Score = 220 (82.5 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 720 YGITEY-EETRSIWFS-EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
YG+ Y EE +WF FE ++ F G LCGL+++N + ++PFPLAL+KK+LD+
Sbjct: 677 YGMFTYPEEASYMWFPVRPKFEKKSY-FFFGLLCGLSLFNCNVADIPFPLALFKKLLDQT 735
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
L+DLK+LSP L +SLQ +LD DLE+VF I F +W
Sbjct: 736 PSLEDLKELSPVLGESLQTLLDDDGDDLEEVFHIHFNVHW 775
Score = 188 (71.2 bits), Expect = 4.0e-31, Sum P(3) = 4.0e-31
Identities = 72/245 (29%), Positives = 117/245 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSLAL+ GE+F WG + GQLG+ S S P+ V+ L+ V +VQ AG +H
Sbjct: 156 GDYHSLALSKGGELFAWGQNLDGQLGVGRIFA-STSTPEIVENLSGVPLVQISAGEAH-- 212
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQAC 121
S+AL+ G V++WG + GQLGL K P ++ L V AC
Sbjct: 213 ----------SMALSMSGNVYSWGRNDCGQLGLGHTYNKES--PSCIEALDDQKVEFLAC 260
Query: 122 AGYSHCLVLTSSGVV-TCTHKENG-CGSDPSQ---------GVQSNLVQD-----SHTTI 165
G H +LT SG+V T + G G + +Q G+ N V HT +
Sbjct: 261 GG-CHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT-L 318
Query: 166 TSLNSPGELYTWGNNEYGQMGINNS-NTTVTKPQRV--------ESLVNLPIALIACGAN 216
++ G+++++G+ + GQ+G + N + +P ++ ES ++ ++ G N
Sbjct: 319 AYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELIMVAGGN 378
Query: 217 HSFVL 221
S ++
Sbjct: 379 QSILI 383
Score = 138 (53.6 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 44/153 (28%), Positives = 69/153 (45%)
Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQD 160
PK +K + + G H LVL+S G + H C +Q D
Sbjct: 99 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEHARFQCILQEKNIIQITC-GD 157
Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
H+ +L+ GEL+ WG N GQ+G+ + + P+ VE+L +P+ I+ G HS
Sbjct: 158 YHSL--ALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMA 215
Query: 221 LSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
LS S +Y++G QL + +K +P I
Sbjct: 216 LSMS-GNVYSWGRNDCGQLGLGHTYNKESPSCI 247
Score = 129 (50.5 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 34/100 (34%), Positives = 49/100 (49%)
Query: 991 VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
V R +++ED +L Q+ D ++ L V+ F GE + GGVR EF
Sbjct: 620 VRRSHLIEDVFSQLNQFENEDLRRELMVS------------FSGEIGYNFGGVRAEFFYC 667
Query: 1051 LLKEILDPKYGMFKEYEETRSIWFS-EDTFEDQNMYFLIG 1089
L +E+ P+YGMF EE +WF FE ++ YF G
Sbjct: 668 LFQEMTRPEYGMFTYPEEASYMWFPVRPKFEKKS-YFFFG 706
Score = 84 (34.6 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 1100 KYSMFKEYEETRSIWFS-EDTFEDQNMYFLIGTLCGLAIYNYTV 1142
+Y MF EE +WF FE ++ YF G LCGL+++N V
Sbjct: 676 EYGMFTYPEEASYMWFPVRPKFEKKS-YFFFGLLCGLSLFNCNV 718
Score = 79 (32.9 bits), Expect = 4.0e-31, Sum P(3) = 4.0e-31
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ +F SP C+ GSFL+ E + +D+ ++ + + + + ++N
Sbjct: 425 IREIFSSPACLTGSFLR----ERIDGKMISIHLDLNTARNTFKELTQ------KDWITNT 474
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+L+K+L P EAL +F LP + E L +PFA A+
Sbjct: 475 ITSCLKDNLLKNLPFNSPHQEALEVFFLLPECPVMHDSNNWESLVVPFAEAV 526
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 259 (96.2 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 102/393 (25%), Positives = 176/393 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
+++ L CGE D G++ + DK ++ P +KGL + V+Q G H + LT
Sbjct: 79 NTIRLIVCGEYGAVLLDDGGKVLI--MDKSTECSP--LKGLENRQVIQIACGDQHSMALT 134
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
ND G++F WG + GQLGL +QS P+ ++ L + V Q AG +
Sbjct: 135 -----------ND-GQLFVWGENALGQLGLRKEQAGTQS-PRHLQSLCGIPVAQISAGGN 181
Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGE-------- 173
H VL+ SGVV + + G G + V + + I S++ GE
Sbjct: 182 HSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKG 241
Query: 174 --LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
++T+G+ +GQ+G +NS P+ V L ++ + CG NH+ V + S +Y+F
Sbjct: 242 GTVFTFGSGGFGQLG-HNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSF 300
Query: 232 GIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
G G QL + + V ++ L PV D ++ ++K+ +G +HS
Sbjct: 301 GCGMQGQLGNGEQVKQSVPL--------PV------DQPTEYNDEYTIQKLVAGENHSFA 346
Query: 292 TVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFL 351
K + D P I+ + +++CE + K+ + L + VF
Sbjct: 347 LYFKELGNEANPD-----PTRGIMTFDNGMIEQCECGKDPRKAIKDLKK--------VFS 393
Query: 352 SPGCMNGSFLQVENDEHFSCNSKKFSFIKLSLI 384
S +NGSFL+ +D H+ S+++ + L+
Sbjct: 394 SAASLNGSFLKTRHDGHYQ-TSEEYCGLDFGLV 425
Score = 167 (63.8 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 725 YEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
Y + + IWF ++ FL G LCGLA N +++N+PFPLAL+KK+L+ L+D
Sbjct: 714 YNDNETMIWFPAKLTVEKKKYFLFGILCGLAFNNSSVVNLPFPLALFKKLLNIKPSLEDF 773
Query: 784 KDLSPTLAKSLQDILDYREPDLED 807
+ +P +SLQ IL+Y LE+
Sbjct: 774 IEFNPVHGRSLQYILEYSNDVLEE 797
Score = 109 (43.4 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
L+ VF S +NGSFL+ +D H+ + + G+D L + T++R ER L+S +
Sbjct: 388 LKKVFSSAASLNGSFLKTRHDGHYQTSEEYCGLDFGLVESSIATLSRNER-----LISTV 442
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLP 507
+ + L+ +L P E+LR+++ LP
Sbjct: 443 LKVLQES-LLPTLNPNPTGEESLRLYILLP 471
Score = 82 (33.9 bits), Expect = 3.3e-27, Sum P(4) = 3.3e-27
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 1071 SIWFSEDTFEDQNM----YFL-IGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNM 1125
SI F+E+ + ++ +FL + KE C S+ M+ + ET IWF ++
Sbjct: 678 SILFTENVSKRTDVHKRDFFLNVFKEL--CDPASQLFMYND-NETM-IWFPAKLTVEKKK 733
Query: 1126 YFLIGTLCGLAIYNYTV 1142
YFL G LCGLA N +V
Sbjct: 734 YFLFGILCGLAFNNSSV 750
Score = 74 (31.1 bits), Expect = 2.2e-26, Sum P(4) = 2.2e-26
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 1044 RREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+R+F + + KE+ DP +F + IWF ++ YFL G
Sbjct: 693 KRDFFLNVFKELCDPASQLFMYNDNETMIWFPAKLTVEKKKYFLFG 738
Score = 43 (20.2 bits), Expect = 3.3e-27, Sum P(4) = 3.3e-27
Identities = 11/50 (22%), Positives = 28/50 (56%)
Query: 820 MSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKL 869
+ DD+ + L+ +FK+ + +V++ N ++ L F +++LQ++
Sbjct: 511 LPDDWLKNLVKLFKKASAKFFGRI-IVENVN-NVAKTHMLKF-VEILQRV 557
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 255 (94.8 bits), Expect = 2.8e-35, Sum P(3) = 2.8e-35
Identities = 81/272 (29%), Positives = 135/272 (49%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G HSL L V++ G ++ GQLG K QS + + + ++S V H
Sbjct: 35 SGERHSLLLFSNHRVYSCGDNSRGQLG----QKSPQSTKRPEEPIQALSTV-------H- 82
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+ L S G HS+A+ G VFTWG + GQLG+ + K+ +P ++ LA + ++Q
Sbjct: 83 IDLVSC-GKEHSVAVCHQGRVFTWGAGSEGQLGIGES-KEISFMPTKINSLAGIKIIQVS 140
Query: 122 AGYSHCLVLTSSGVVTC--THKEN--GCGSD------PS-----QGVQSNLVQDSHTTIT 166
G+ H L L+ G V ++++ G G++ P +G+ V T
Sbjct: 141 CGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSF 200
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTT---VTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L+ G + WGNN GQ+ ++ ++ + KP + +L L + I+CG H+ VL++
Sbjct: 201 ALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 260
Query: 224 SVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG 254
+++ FG S+ QL SP+S PQLI G
Sbjct: 261 D-GQVFTFGGSSSEQLQHSPRSGRGGPQLIEG 291
Score = 226 (84.6 bits), Expect = 2.0e-28, Sum P(4) = 2.0e-28
Identities = 89/334 (26%), Positives = 149/334 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+A+ G VFTWG + GQLG+ + K+ +P ++ LA + ++Q G+
Sbjct: 89 GKEHSVAVCHQGRVFTWGAGSEGQLGIGES-KEISFMPTKINSLAGIKIIQVSCGH---- 143
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HSLAL++ G+VF+WG + GQLGL + + SQ+ P++VK L + + Q A
Sbjct: 144 --------YHSLALSEDGQVFSWGSNRQGQLGLGN-NLCSQASPQKVKSLEGIPLAQVAA 194
Query: 123 GYSHCLVL----TS-------SGVVTCT---------HKENGCGSDPSQGVQSNLVQDSH 162
G +H L TS SG + + +K + G+ + V H
Sbjct: 195 GGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEH 254
Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
T++ L G+++T+G + Q+ ++ + PQ +E + ++ I CG+ H+
Sbjct: 255 TSV--LTEDGQVFTFGGSSSEQLQ-HSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIA-- 308
Query: 223 KSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI 282
Y + G V L S T H S V LV + VK I
Sbjct: 309 ------YVYTTGQVVSLGRGPSC--TSNATHQEAACSDVTCLLSAKDLVD----IEVKDI 356
Query: 283 YSGGDHSIVTV---TKSSD---GVLSDDFRVLNP 310
++G + VT T+S+ +L + R+ P
Sbjct: 357 FAGAHANFVTTCRHTRSTSVSMKILPEIIRITQP 390
Score = 182 (69.1 bits), Expect = 1.1e-23, Sum P(4) = 1.1e-23
Identities = 56/205 (27%), Positives = 101/205 (49%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR-VKGLASVSVVQAC 121
+L + +G HSL L V++ G ++ GQLG +S +S P+ ++ L++V +
Sbjct: 30 LLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSP--QSTKRPEEPIQALSTVHIDLVS 87
Query: 122 AGYSHCLVLTSSG-VVTC---THKENGCGSD------PSQ-----GVQSNLVQDSHTTIT 166
G H + + G V T + + G G P++ G++ V H
Sbjct: 88 CGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSL 147
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L+ G++++WG+N GQ+G+ N+ + PQ+V+SL +P+A +A G HSF LS +
Sbjct: 148 ALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSL-MG 206
Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQL 251
+ +G + QL + K Q+
Sbjct: 207 TSFGWGNNRSGQLALSGNSAKAEQI 231
Score = 179 (68.1 bits), Expect = 2.8e-35, Sum P(3) = 2.8e-35
Identities = 37/90 (41%), Positives = 59/90 (65%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
Y + Y E S +WF + +++ FL G LCGL++ N +IN+ FPLALYKK+L++
Sbjct: 752 YEMFMYPENGSNMWFPVNPKFEKSRYFLFGILCGLSLNNLNVINLSFPLALYKKLLEQKP 811
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDV 808
L+DLKDLS L ++LQ++L+ +E++
Sbjct: 812 SLEDLKDLSLLLGRNLQEVLNCEAGVIEEL 841
Score = 169 (64.5 bits), Expect = 2.6e-22, Sum P(4) = 2.6e-22
Identities = 78/309 (25%), Positives = 134/309 (43%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
++ + G +HSLAL++ G+VF+WG + GQLGL + + SQ+ P++VK L + + Q A
Sbjct: 136 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGN-NLCSQASPQKVKSLEGIPLAQVAA 194
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQG--VQSNLVQDSHT--TITSLN----SPGEL 174
G +H L+ G + N G G ++ + H+ + +LN S G
Sbjct: 195 GGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYE 253
Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGI 233
+T E GQ+ +++ S P + G + S + S + Y +
Sbjct: 254 HTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTT 313
Query: 234 GSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
G V L S T H S V LV + VK I++G + VT
Sbjct: 314 GQVVSLGRGPSC--TSNATHQEAACSDVTCLLSAKDLVD----IEVKDIFAGAHANFVTT 367
Query: 294 TKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSP 353
+ + S ++L P +I+ + +K+ R ++ K E +++ L +F SP
Sbjct: 368 CRHTRST-SVSMKIL-P--EIIRITQPLVKKW-RAAKKGKVHEDAKREISL----IFSSP 418
Query: 354 GCMNGSFLQ 362
C+ SFL+
Sbjct: 419 ACLTASFLK 427
Score = 133 (51.9 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 989 VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
++V R ++VEDT+R+L Q D +K L V F E + GGV EF
Sbjct: 693 LKVRRSHLVEDTLRQLRQAEDFDLRKTLSVG------------FINEIRPEGGGVSSEFF 740
Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+ +E+ DPKY MF E ++WF + +++ YFL G
Sbjct: 741 HCIFEEMTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFG 781
Score = 127 (49.8 bits), Expect = 7.7e-18, Sum P(4) = 7.7e-18
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-CGSD-------PSQGVQS- 155
P+R++ + +++A +G H L+L S+ V +C G G P + +Q+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQAL 78
Query: 156 -----NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
+LV ++ G ++TWG GQ+GI S P ++ SL + I
Sbjct: 79 STVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQ 138
Query: 211 IACGANHSFVLSKSVSRLYAFGIGSAVQL 239
++CG HS LS+ +++++G QL
Sbjct: 139 VSCGHYHSLALSED-GQVFSWGSNRQGQL 166
Score = 101 (40.6 bits), Expect = 1.4e-31, Sum P(4) = 1.4e-31
Identities = 47/216 (21%), Positives = 92/216 (42%)
Query: 811 ITF-RNWYLLMSDDYFERLILIFKQCLIYLLQQ--PGVVDSTNGDITFNRKLSFCLQVLQ 867
+TF RNW+ + L+ + K+ ++ L P + D++N ++ + ++L+
Sbjct: 520 LTFLRNWWASLEVSSLNSLVQMLKKTIVSQLHNEVPMMKDTSNLKVSLEM-MKEVQKILE 578
Query: 868 KLNS-LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLA---TVCDIRIDYF 923
K NS L+NE ++ + + + ++ AF M D+ T I
Sbjct: 579 KTNSHLHNEVPKMEDTSNLKVLLEVMKEVHEANCQLPENAFIMNDIFNFNTEEGIMAKQQ 638
Query: 924 RWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL 983
+ + DF PFI D +K L++ D +++ + +P +
Sbjct: 639 MFFIKYYSMVFNDF----PFILDLPSKIILMKHDSSVKLSDEVKVAA--------SPEKM 686
Query: 984 N-QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKV 1018
+ ++V R ++VEDT+R+L Q D +K L V
Sbjct: 687 GCPFFILKVRRSHLVEDTLRQLRQAEDFDLRKTLSV 722
Score = 93 (37.8 bits), Expect = 2.8e-35, Sum P(3) = 2.8e-35
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ +F SP C+ SFL+ + D + N N VD++L +D + + + +S+L
Sbjct: 411 ISLIFSSPACLTASFLK-KRDAGEN-NFIN--VDLKLARDVFKML------TAEKWISSL 460
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
L++ L + P EAL +FL LP +P+ + L FA A+
Sbjct: 461 ITTCLEETLLRGLPYSSPHQEALLVFLLLPECSIMQDPKNWKTLAFEFASAI 512
Score = 88 (36.0 bits), Expect = 1.4e-31, Sum P(4) = 1.4e-31
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 1088 IGKEYVPCTYIS----KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
+ E+ C + KY MF E ++WF + +++ YFL G LCGL++ N V
Sbjct: 735 VSSEFFHCIFEEMTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFGILCGLSLNNLNV 793
Score = 64 (27.6 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--SPKSVHKTPQ 250
+P+R+E+ L + A G HS +L + R+Y+ G S QL SP+S K P+
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSN-HRVYSCGDNSRGQLGQKSPQST-KRPE 72
Score = 39 (18.8 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 504 LTLPLYHEFMNPRQHEILHMPFAGALPAFWIVVFGSLIGICGLGHLD 550
+T P Y FM P + P +FG L G+ L +L+
Sbjct: 747 MTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFGILCGL-SLNNLN 792
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 222 (83.2 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 45/99 (45%), Positives = 63/99 (63%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y E S +WF ++ F G LCGL+++N+ + N+PFPLAL+KK+LD+
Sbjct: 743 YGMFTYPEDASYMWFPVTPKFEKKRYFFFGVLCGLSLFNFNVANIPFPLALFKKLLDQTP 802
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
L+DLK+LSP L KSLQ +LD D +VF I F +W
Sbjct: 803 SLEDLKELSPVLGKSLQTLLDDEGDDFGEVFLIYFNVHW 841
Score = 211 (79.3 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 83/297 (27%), Positives = 142/297 (47%)
Query: 63 VLTSTTGLWHSLALN--DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
++ T G +HSLAL+ GE+F WG + HGQLG+ S P+ V+ L+ V +VQ
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFT-SIPTPQLVEHLSGVPLVQI 195
Query: 121 CAGYSHCLVLTSSGVVTCTHKEN----GCG----SD-PS--QGVQSNLVQ-----DSHTT 164
AG +H + L+ SG + + + G G D PS + + + V+ SHT
Sbjct: 196 SAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTA 255
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN-HSFVLSK 223
+ L G ++T+G +YGQ+G +NS +P+ V L + +ACG+ H+
Sbjct: 256 L--LTKDGLVFTFGAGKYGQLG-HNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVS 312
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKI 282
+ ++++FG G QL + + H I P+ + + E+ S + + I
Sbjct: 313 DLGKVFSFGSGKEGQLGNGGT--------HNQLIPLPMKLPSNEELKFESRTSEKELIMI 364
Query: 283 YSGGDHSIVT-VTKSSDGV-LSDDFRVLNPATQ---ILDVNFERLKECEREVEQLKS 334
+GG+ SI+ + K + V L LN T I DV ++ + +RE+ ++ S
Sbjct: 365 -AGGNQSILLWMGKKNPYVNLRRRIPTLNEGTVKRWIADVGTKQWQNTKREIREIFS 420
Score = 170 (64.9 bits), Expect = 3.6e-30, Sum P(3) = 3.6e-30
Identities = 64/221 (28%), Positives = 107/221 (48%)
Query: 3 GLWHSLALN--DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
G +HSLAL+ GE+F WG + HGQLG+ S P+ V+ L+ V +VQ AG +H
Sbjct: 143 GDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFT-SIPTPQLVEHLSGVPLVQISAGKAH 201
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQ 119
S+AL+ G +++WG + GQLGL + + P ++ L + V
Sbjct: 202 ------------SMALSMSGNIYSWGRNDLGQLGLGHTN--GEDFPSLIEALDNQKVEFL 247
Query: 120 ACAGYSHCLVLTSSGVVTC--THKENGCGSDPSQG-VQSNLVQDS--------------H 162
AC G SH +LT G+V K G + +Q ++ LV + H
Sbjct: 248 ACGG-SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWH 306
Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNS-NTTVTKPQRVES 202
T + ++ G+++++G+ + GQ+G + N + P ++ S
Sbjct: 307 T-LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPS 346
Score = 149 (57.5 bits), Expect = 8.1e-27, Sum P(3) = 8.1e-27
Identities = 42/153 (27%), Positives = 70/153 (45%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNI 996
++PFIF+ +K LL D ++++ + L Q + L + V R ++
Sbjct: 632 HFPFIFNILSKIKLLYADSLLKIQEKKFRACMRLAGIMEQGGSQLALLPTFNLTVRRSHL 691
Query: 997 VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
+ED + L Q+ D ++ L V+ F GE D+GGV+ EF L +E+
Sbjct: 692 IEDVLNHLNQFENEDLRRELMVS------------FSGEIGHDSGGVKVEFFHCLFEEMT 739
Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
P+YGMF E+ +WF ++ YF G
Sbjct: 740 RPEYGMFTYPEDASYMWFPVTPKFEKKRYFFFG 772
Score = 146 (56.5 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 43/144 (29%), Positives = 65/144 (45%)
Query: 103 QSIPKR-VKGLASVSVVQACAGYSHCLVLTSSGV-----VTCTHKEN-GCGSDPSQGVQS 155
+S PK+ +K + + G H L+L+S G + H C +Q
Sbjct: 81 RSKPKKCIKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYSIEHASRFQCILQEKSIIQI 140
Query: 156 NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
D H+ S GEL+ WG N +GQ+G+ T++ PQ VE L +P+ I+ G
Sbjct: 141 TC-GDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGK 199
Query: 216 NHSFVLSKSVSRLYAFGIGSAVQL 239
HS LS S +Y++G QL
Sbjct: 200 AHSMALSMS-GNIYSWGRNDLGQL 222
Score = 87 (35.7 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ +F SP C+ GSFL+ E + + +D+ ++ + + + + ++N+
Sbjct: 415 IREIFSSPACLIGSFLK----ERIAAETMLIHLDLNKARNDFKELTQ------KDWIANM 464
Query: 478 AILAS-HAHLVKSLWNTPPDAEALRMFLTLP---LYHEFMNPRQHEILHMPFAGALPA 531
I S +L+K+L P EAL +F LP + H++ N E L +PFA A+ A
Sbjct: 465 VITTSLKDNLLKNLPFHSPHQEALEIFFLLPECPMMHDYNN---WESLVVPFAEAICA 519
Score = 87 (35.7 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 1100 KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
+Y MF E+ +WF ++ YF G LCGL+++N+ V
Sbjct: 742 EYGMFTYPEDASYMWFPVTPKFEKKRYFFFGVLCGLSLFNFNV 784
Score = 53 (23.7 bits), Expect = 6.7e-31, Sum P(3) = 6.7e-31
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 346 LETVFLSPGCMNGSFLQ--VENDE---HFSCNSKKFSFIKLSLINWFMKL 390
+ +F SP C+ GSFL+ + + H N + F +L+ +W +
Sbjct: 415 IREIFSSPACLIGSFLKERIAAETMLIHLDLNKARNDFKELTQKDWIANM 464
Score = 47 (21.6 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 237 VQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSH 273
+ LD K+ + +L WIA+ V T+ +D+L+ +
Sbjct: 441 IHLDLNKARNDFKELTQKDWIANMVITTSLKDNLLKN 477
>UNIPROTKB|H0Y8G9 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 EMBL:AC108065
SUPFAM:SSF56204 HGNC:HGNC:4876 ChiTaRS:HERC3 EMBL:AC083829
EMBL:AC098582 Ensembl:ENST00000512194 Bgee:H0Y8G9 Uniprot:H0Y8G9
Length = 278
Score = 368 (134.6 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 81/193 (41%), Positives = 115/193 (59%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQR 959
+ V Y FY+P+++ + DI+ DY W + T LC+YPFIFDA+AKT +L+ D
Sbjct: 6 KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMDTVT-LCSYPFIFDAQAKTKMLQTDAE 64
Query: 960 IQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYTTNDFKKPL 1016
+QM+ A+N N L T P +L + V R+N+V D +REL+ ++ D KKPL
Sbjct: 65 LQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHSDIDLKKPL 124
Query: 1017 KVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
KV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y+++ +WFS+
Sbjct: 125 KVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSD 172
Query: 1077 DTFEDQNMYFLIG 1089
F + N + LIG
Sbjct: 173 TCFVEHNWFHLIG 185
Score = 246 (91.7 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 156 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 215
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ++LDY D+E+ F + F
Sbjct: 216 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 250
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
Y MF Y+++ +WFS+ F + N + LIG CGLAIYN TV
Sbjct: 156 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTV 197
>UNIPROTKB|F5GWU0 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 EMBL:AC108065
SUPFAM:SSF56204 HGNC:HGNC:4876 ChiTaRS:HERC3 EMBL:AC083829
EMBL:AC098582 IPI:IPI00966754 ProteinModelPortal:F5GWU0 SMR:F5GWU0
Ensembl:ENST00000543130 UCSC:uc011cdo.1 ArrayExpress:F5GWU0
Bgee:F5GWU0 Uniprot:F5GWU0
Length = 494
Score = 360 (131.8 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 83/201 (41%), Positives = 119/201 (59%)
Query: 900 RKVAYTAFYMPDLATVCDIRIDYFRW------ISGRPNGSTRDF--LCNYPFIFDAKAKT 951
+ V Y FY+P+++ + DI+ DY W + RP+ +D LC+YPFIFDA+AKT
Sbjct: 49 KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKARPS-IIQDTVTLCSYPFIFDAQAKT 107
Query: 952 TLLEMDQRIQMEHAMNQTNFY--LFLQTFNPHTLNQ-YLEVEVSRDNIVEDTIRELAQYT 1008
+L+ D +QM+ A+N N L T P +L + V R+N+V D +REL+ ++
Sbjct: 108 KMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHS 167
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
D KKPLKV F GEEA DAGGV +EF +LLLKE+L+P YGMF Y++
Sbjct: 168 DIDLKKPLKVI------------FDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQD 215
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+ +WFS+ F + N + LIG
Sbjct: 216 SNLLWFSDTCFVEHNWFHLIG 236
Score = 246 (91.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 207 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 266
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ++LDY D+E+ F + F
Sbjct: 267 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 301
Score = 45 (20.9 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 827 RLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLN 873
+L+ ++K ++YLL+ + FN ++ L++L+KL +N
Sbjct: 2 KLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVN 45
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 253 (94.1 bits), Expect = 9.5e-30, Sum P(3) = 9.5e-30
Identities = 93/351 (26%), Positives = 160/351 (45%)
Query: 50 SVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV 109
+V + G + V+ G HS+AL + G++F WG + GQLGL +QS P+ +
Sbjct: 105 TVCRPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQS-PQHL 163
Query: 110 KGLASVSVVQACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTI 165
+ L + V Q AG +H VL+ SGVV + + + G G + + + + S
Sbjct: 164 QSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKT 223
Query: 166 TSLNSPGE----------LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
S++ GE ++T+G+ +GQ+G +NS P+ V L ++ + CG
Sbjct: 224 VSISCGGEHTATLSKGGTVFTFGSGGFGQLG-HNSLKDEHHPRLVAELWGSKVSQVTCGR 282
Query: 216 NHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSG 275
+H+ V S +++Y+FG G QL + + V ++ L P + P T
Sbjct: 283 HHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPL---P-VLLPTECTE---------- 328
Query: 276 GLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSD 335
++K+ +G +HS KS N IL +N +R+ +R V +
Sbjct: 329 -FTMEKLIAGENHSFALFFKSPGNESEKPKSGSNGG--ILTLN-DRI--IDRWVSESDPW 382
Query: 336 ETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKK----FSFIKLS 382
T+ ++ TVF S +NGSFL+ DEH+ + ++ F +K S
Sbjct: 383 PTIKNEI----NTVFSSAASLNGSFLKTSRDEHYQTSVERCGLDFDLVKTS 429
Score = 196 (74.1 bits), Expect = 4.1e-31, Sum P(4) = 4.1e-31
Identities = 70/235 (29%), Positives = 100/235 (42%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL + G++F WG + GQLGL +QS P+ ++ L + V Q AG +H VL
Sbjct: 127 HSMALTNDGQLFVWGENALGQLGLRKEQAGTQS-PQHLQSLCGIPVAQISAGGNHSFVL- 184
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
SL+ G VF WG ++ GQLGL D + IP VK L+ V G
Sbjct: 185 -------SLS----GVVFGWGSNSAGQLGL--GDTTDRFIPTIVKSLSGKKTVSISCGGE 231
Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSN----LVQD------------SHTTITSLN 169
H L+ G V T G G ++ LV + H T+ +
Sbjct: 232 HTATLSKGGTVF-TFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFED 290
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRV---ESLVNLPIALIACGANHSFVL 221
S ++Y++G GQ+G N + P V + + G NHSF L
Sbjct: 291 SSNQIYSFGCGMQGQLG-NGEQVKQSVPLPVLLPTECTEFTMEKLIAGENHSFAL 344
Score = 185 (70.2 bits), Expect = 6.3e-30, Sum P(4) = 6.3e-30
Identities = 55/197 (27%), Positives = 96/197 (48%)
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS 155
E AD+K + + + + + S+ C G + ++L G V + C P +G+++
Sbjct: 63 EDADEKLEPLQLQNERIRSI----VC-GEAGAVLLADDGKVLVMDQSTVCR--PLKGLEN 115
Query: 156 N-LVQ----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
++Q D H+ +L + G+L+ WG N GQ+G+ PQ ++SL +P+A
Sbjct: 116 RQVIQIACGDQHSM--ALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQ 173
Query: 211 IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDS 269
I+ G NHSFVLS S ++ +G SA QL + + P ++ V+++ G +
Sbjct: 174 ISAGGNHSFVLSLS-GVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEH 232
Query: 270 LVSHSGGLVVKKIYSGG 286
+ S G V SGG
Sbjct: 233 TATLSKGGTVFTFGSGG 249
Score = 182 (69.1 bits), Expect = 4.1e-31, Sum P(4) = 4.1e-31
Identities = 35/92 (38%), Positives = 59/92 (64%)
Query: 722 ITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQ 781
I E E+ +WF+ +D + +G +CG+A+YN IN+ FPLAL+KK+L + L
Sbjct: 720 ILEVHESSLVWFNPHHTQDHRDFYYLGVICGMALYNRHHINIDFPLALFKKLLQQKPSLD 779
Query: 782 DLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
DL++LSP A+SL+++L+ E ++ D+ + F
Sbjct: 780 DLEELSPVEARSLKNLLEEDEEEVVDLQHLDF 811
Score = 119 (46.9 bits), Expect = 4.1e-31, Sum P(4) = 4.1e-31
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ TVF S +NGSFL+ DEH+ + + G+D L + + A++ +SL+S +
Sbjct: 389 INTVFSSAASLNGSFLKTSRDEHYQTSVERCGLDFDLVKTSF---AKLSTS--KSLISEV 443
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLP 507
+ L+ SL P EALR++L LP
Sbjct: 444 VKVVQQT-LLPSLNPNPTGEEALRLYLLLP 472
Score = 80 (33.2 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 983 LNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGG 1042
LN L + ++R++++ DT++ L +T + F PL QV F GE+ D
Sbjct: 655 LNGNL-LHINRESVLTDTLQYLRPFTYS-FMHPL------------QVAFIGEDEIDEKV 700
Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+ EF L+ K ++ + E E+ +WF+ +D ++ +G
Sbjct: 701 ISAEFFSLISKSFIEWDKKIL-EVHESSLVWFNPHHTQDHRDFYYLG 746
Score = 78 (32.5 bits), Expect = 3.0e-23, Sum P(4) = 3.0e-23
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 1106 EYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYN 1139
E E+ +WF+ +D ++ +G +CG+A+YN
Sbjct: 722 EVHESSLVWFNPHHTQDHRDFYYLGVICGMALYN 755
Score = 65 (27.9 bits), Expect = 3.0e-23, Sum P(4) = 3.0e-23
Identities = 45/202 (22%), Positives = 85/202 (42%)
Query: 820 MSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTS 879
+ DD+FE LI +F + L++Q + D R L L++LQ + T +
Sbjct: 511 LPDDWFEALIKLFHKESAELIKQ---ISRGETDDQSTRHLKNFLEILQMAYQICCSTNIT 567
Query: 880 SISAGGRTVSNIRTPAPHGGRKVAYTAFYMP---DLATVCDIRIDYFRWISGRPNGSTRD 936
+ V+++ +V + A +P +L + YF+ T +
Sbjct: 568 NHDFIIPEVNDLLETLDATSAEVLWMASRLPINEELHNRMKLEDYYFK---------TAE 618
Query: 937 FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNI 996
L +PF+ D K ++ + Q E + L H LN L + ++R+++
Sbjct: 619 ILVKFPFVSDFLTKKSMFILLQ----EQCIRS-----LLDLLVVH-LNGNL-LHINRESV 667
Query: 997 VEDTIRELAQYTTNDFKKPLKV 1018
+ DT++ L +T + F PL+V
Sbjct: 668 LTDTLQYLRPFTYS-FMHPLQV 688
Score = 46 (21.3 bits), Expect = 9.5e-16, Sum P(3) = 9.5e-16
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 357 NGSFLQVENDEHFSCNSKKFSFIKLSLI-NWFMKLHFSIFGQGFGCVCP 404
NGS +QV N +K+ + + + N +K F F +GF CP
Sbjct: 821 NGSQIQVNK-----VNRQKYVDLYVDFVFNKSVKTQFEQFTEGFSEGCP 864
Score = 41 (19.5 bits), Expect = 3.8e-23, Sum P(4) = 3.8e-23
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 336 ETLDQDLLLYLETV---FLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSLINWFMKL 390
E++ D L YL F+ P + +F+ + + +++ FS I S I W K+
Sbjct: 665 ESVLTDTLQYLRPFTYSFMHP--LQVAFIGEDEIDEKVISAEFFSLISKSFIEWDKKI 720
Score = 38 (18.4 bits), Expect = 4.1e-31, Sum P(4) = 4.1e-31
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 1067 EETRSIW--FSEDTFEDQNMY--FLIGKEYVPCTYISKYSM 1103
E ++ W F E + E++ + FL G E VP SK ++
Sbjct: 905 ELIKNFWTVFFELSEENKKKFLMFLYGTERVPAGGFSKRAL 945
Score = 38 (18.4 bits), Expect = 5.6e-15, Sum P(4) = 5.6e-15
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 247 KTPQLIHGPW-IASPVAMTAGED 268
K Q+IHG W I S +A +D
Sbjct: 17 KPEQVIHGNWGIKSICPSSAVQD 39
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 210 (79.0 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 81/272 (29%), Positives = 126/272 (46%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G HSL L V++ G ++ GQLG +KS KR + + ++S V H
Sbjct: 35 SGERHSLLLFSNHRVYSCGDNSRGQLG-----QKSPQSTKRPEPIQALSTV-------H- 81
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPK--RVKGLASVSVVQ 119
+ L S G HS+A+ G VFTWG + GQLG+ + + S K + G+ + V
Sbjct: 82 IDLVSC-GKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQV-- 138
Query: 120 ACAGYSHCLVLTSSGVVTCTHKENG--------CGSDPSQGVQS----NLVQDSH--TTI 165
+C Y + V + G C Q V+S L Q + T
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHS 198
Query: 166 TSLNSPGELYTWGNNEYGQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L+ G + WGNN GQ+ + N++ + KP + +L L + I+CG H+ VL++
Sbjct: 199 FALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258
Query: 224 SVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG 254
+++ FG S+ QL SP+S PQLI G
Sbjct: 259 D-GQVFTFGGSSSEQLQHSPRSGRGGPQLIEG 289
Score = 202 (76.2 bits), Expect = 7.6e-26, Sum P(4) = 7.6e-26
Identities = 69/236 (29%), Positives = 106/236 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSLAL++ G+VF+WG + GQLGL + + SQ+ P++VK L + + Q AG +H
Sbjct: 141 GHYHSLALSEDGQVFSWGSNRQGQLGLGN-NLCSQASPQKVKSLEGIPLAQVAAGGTH-- 197
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQAC 121
S AL+ G F WG + GQL L K Q P + L +++VV
Sbjct: 198 ----------SFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYIS 247
Query: 122 AGYSHCLVLTSSGVV---------TCTHKENGCGSDPS--QGVQSNLVQ---DSHTTITS 167
GY H VLT G V H P +G+ ++ Q S+ TI
Sbjct: 248 CGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAY 307
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTT---VTKPQRVESLVNLPIALIACGANHSFV 220
+ + G++ + G + VT + LV++ + I GA+ +FV
Sbjct: 308 VYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANFV 363
Score = 188 (71.2 bits), Expect = 2.4e-24, Sum P(4) = 2.4e-24
Identities = 51/175 (29%), Positives = 90/175 (51%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+L + +G HSL L V++ G ++ GQLG +S +S P+ ++ L++V +
Sbjct: 30 LLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSP--QSTKRPEPIQALSTVHIDLVSC 87
Query: 123 GYSHCLVLTSSG-VVTC---THKENGCGSD------PSQ-----GVQSNLVQDSHTTITS 167
G H + + G V T + + G G P++ G++ V H +
Sbjct: 88 GKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLA 147
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
L+ G++++WG+N GQ+G+ N+ + PQ+V+SL +P+A +A G HSF LS
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALS 202
Score = 179 (68.1 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 37/90 (41%), Positives = 59/90 (65%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
Y + Y E S +WF + +++ FL G LCGL++ N +IN+ FPLALYKK+L++
Sbjct: 750 YEMFMYPENGSNMWFPVNPKFEKSRYFLFGILCGLSLNNLNVINLSFPLALYKKLLEQKP 809
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDV 808
L+DLKDLS L ++LQ++L+ +E++
Sbjct: 810 SLEDLKDLSLLLGRNLQEVLNCEAGVIEEL 839
Score = 167 (63.8 bits), Expect = 4.3e-22, Sum P(4) = 4.3e-22
Identities = 78/308 (25%), Positives = 133/308 (43%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
++ + G +HSLAL++ G+VF+WG + GQLGL + + SQ+ P++VK L + + Q A
Sbjct: 135 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGN-NLCSQASPQKVKSLEGIPLAQVAA 193
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-LVQDSHT--TITSLN----SPGELY 175
G +H L+ G + N G G + + H+ + +LN S G +
Sbjct: 194 GGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEH 252
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
T E GQ+ +++ S P + G + S + S + Y + G
Sbjct: 253 TSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 312
Query: 235 SAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
V L S T H S V LV + VK I++G + VT
Sbjct: 313 QVVSLGRGPSC--TSNATHQEAACSDVTCLLSAKDLVD----IEVKDIFAGAHANFVTTC 366
Query: 295 KSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPG 354
+ + S ++L P +I+ + +K+ R ++ K E +++ L +F SP
Sbjct: 367 RHTRST-SVSMKIL-P--EIIRITQPLVKKW-RAAKKGKVHEDAKREISL----IFSSPA 417
Query: 355 CMNGSFLQ 362
C+ SFL+
Sbjct: 418 CLTASFLK 425
Score = 133 (51.9 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 989 VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
++V R ++VEDT+R+L Q D +K L V F E + GGV EF
Sbjct: 691 LKVRRSHLVEDTLRQLRQAEDFDLRKTLSVG------------FINEIRPEGGGVSSEFF 738
Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+ +E+ DPKY MF E ++WF + +++ YFL G
Sbjct: 739 HCIFEEMTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFG 779
Score = 128 (50.1 bits), Expect = 6.0e-18, Sum P(4) = 6.0e-18
Identities = 38/148 (25%), Positives = 69/148 (46%)
Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-CGS---------DPSQGVQ 154
P+R++ + +++A +G H L+L S+ V +C G G +P Q +
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78
Query: 155 S---NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
+ +LV ++ G ++TWG GQ+GI S P ++ SL + I +
Sbjct: 79 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQV 138
Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQL 239
+CG HS LS+ +++++G QL
Sbjct: 139 SCGHYHSLALSED-GQVFSWGSNRQGQL 165
Score = 101 (40.6 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 47/216 (21%), Positives = 92/216 (42%)
Query: 811 ITF-RNWYLLMSDDYFERLILIFKQCLIYLLQQ--PGVVDSTNGDITFNRKLSFCLQVLQ 867
+TF RNW+ + L+ + K+ ++ L P + D++N ++ + ++L+
Sbjct: 518 LTFLRNWWASLEVSSLNSLVQMLKKTIVSQLHNEVPMMKDTSNLKVSLEM-MKEVQKILE 576
Query: 868 KLNS-LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLA---TVCDIRIDYF 923
K NS L+NE ++ + + + ++ AF M D+ T I
Sbjct: 577 KTNSHLHNEVPKMEDTSNLKVLLEVMKEVHEANCQLPENAFIMNDIFNFNTEEGIMAKQQ 636
Query: 924 RWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL 983
+ + DF PFI D +K L++ D +++ + +P +
Sbjct: 637 MFFIKYYSMVFNDF----PFILDLPSKIILMKHDSSVKLSDEVKVAA--------SPEKM 684
Query: 984 N-QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKV 1018
+ ++V R ++VEDT+R+L Q D +K L V
Sbjct: 685 GCPFFILKVRRSHLVEDTLRQLRQAEDFDLRKTLSV 720
Score = 93 (37.8 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ +F SP C+ SFL+ + D + N N VD++L +D + + + +S+L
Sbjct: 409 ISLIFSSPACLTASFLK-KRDAGEN-NFIN--VDLKLARDVFKML------TAEKWISSL 458
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
L++ L + P EAL +FL LP +P+ + L FA A+
Sbjct: 459 ITTCLEETLLRGLPYSSPHQEALLVFLLLPECSIMQDPKNWKTLAFEFASAI 510
Score = 88 (36.0 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 1088 IGKEYVPCTYIS----KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
+ E+ C + KY MF E ++WF + +++ YFL G LCGL++ N V
Sbjct: 733 VSSEFFHCIFEEMTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFGILCGLSLNNLNV 791
Score = 66 (28.3 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--SPKSVHKTPQLIH 253
+P+R+E+ L + A G HS +L + R+Y+ G S QL SP+S K P+ I
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSN-HRVYSCGDNSRGQLGQKSPQST-KRPEPIQ 75
Query: 254 GPWIASPVAMTAGEDSLVS--HSG 275
++ G++ V+ H G
Sbjct: 76 ALSTVHIDLVSCGKEHSVAVCHQG 99
Score = 39 (18.8 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 504 LTLPLYHEFMNPRQHEILHMPFAGALPAFWIVVFGSLIGICGLGHLD 550
+T P Y FM P + P +FG L G+ L +L+
Sbjct: 745 MTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFGILCGL-SLNNLN 790
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 253 (94.1 bits), Expect = 5.6e-30, Sum P(3) = 5.6e-30
Identities = 96/343 (27%), Positives = 159/343 (46%)
Query: 50 SVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV 109
+V + G + V+ G HS+AL++ G++F WG + HGQLGL QS P+ +
Sbjct: 107 TVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQS-PQHL 165
Query: 110 KGLASVSVVQACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTI 165
+ L + V Q AG +H VL+ SGVV + + + G G + V + + S
Sbjct: 166 QSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKT 225
Query: 166 TSLNSPGE----------LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
S++ GE ++T+G+ +GQ+G +NS P+ V L ++ + CG
Sbjct: 226 VSISCGGEHTATLSKGGTVFTFGSGGFGQLG-HNSLKDEHHPRLVAELWGSKVSQVTCGR 284
Query: 216 NHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSG 275
+H+ VL +R+Y+FG G QL + + V ++ L PV + D +
Sbjct: 285 HHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPL--------PVLLPT--DCNCEFT- 333
Query: 276 GLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSD 335
++KI +G HS K+ + +N IL +N +R+ +R V
Sbjct: 334 ---MEKIIAGEKHSFALFFKNPGNESTKPKSSMNGG--ILTLN-DRM--IDRWVSGSYPW 385
Query: 336 ETLDQDLLLYLETVFLSPGCMNGSFLQVENDEH-FSCNSKKFS 377
T+ +++ + VF S C+NGSFL+ DE F K FS
Sbjct: 386 PTVKKEI----KKVFSSAVCLNGSFLKPSLDEQDFDLVGKSFS 424
Score = 193 (73.0 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 69/235 (29%), Positives = 100/235 (42%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL++ G++F WG + HGQLGL QS P+ ++ L + V Q AG +H VL
Sbjct: 129 HSVALSNDGQLFVWGENAHGQLGLRKEQALIQS-PQHLQSLCGIPVAQISAGGNHSFVL- 186
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
SL+ G VF WG ++ GQLGL D + +P VK L+ V G
Sbjct: 187 -------SLS----GVVFGWGSNSAGQLGL--GDTTDRFVPTIVKSLSGKKTVSISCGGE 233
Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSN----LVQD------------SHTTITSLN 169
H L+ G V T G G ++ LV + H T+ +
Sbjct: 234 HTATLSKGGTVF-TFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVA 292
Query: 170 SPGELYTWGNNEYGQMGINNS-NTTVTKPQRVESLVNLPIAL--IACGANHSFVL 221
+Y++G GQ+G +V P + + N + I G HSF L
Sbjct: 293 LTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347
Score = 185 (70.2 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 50/170 (29%), Positives = 84/170 (49%)
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-LVQ----DSHTTITSLNSPGELYTW 177
G ++L G V K C P +G+ + ++Q D H+ +L++ G+L+ W
Sbjct: 87 GEDGAVLLADGGKVLLMDKYTVCR--PLKGLDNTKVIQIACGDQHSV--ALSNDGQLFVW 142
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G N +GQ+G+ + PQ ++SL +P+A I+ G NHSFVLS S ++ +G SA
Sbjct: 143 GENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLS-GVVFGWGSNSAG 201
Query: 238 QLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
QL + + P ++ V+++ G + + S G V SGG
Sbjct: 202 QLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGG 251
Score = 160 (61.4 bits), Expect = 5.6e-30, Sum P(3) = 5.6e-30
Identities = 36/93 (38%), Positives = 59/93 (63%)
Query: 722 ITEYEETRSIWFS-EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILL 780
I E + +WF+ T ++N +L G +CG+A+YN IN+ FPLAL+KK+L + L
Sbjct: 709 ILEVHPSSLVWFNPHHTRGNKNFYYL-GVICGMALYNRHHINIDFPLALFKKLLQQKPSL 767
Query: 781 QDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
DL++LSP A+SL+++L E ++ D+ + F
Sbjct: 768 DDLEELSPVEARSLKNLLKEDE-EVVDLLFLDF 799
Score = 92 (37.4 bits), Expect = 5.9e-23, Sum P(3) = 5.9e-23
Identities = 46/181 (25%), Positives = 81/181 (44%)
Query: 911 DLATVCDIRIDYFRWISGRPNG-STRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQT 969
DLA D +DY + R T + L +PF+ D +K + ++++ +
Sbjct: 582 DLAD-WDPFVDYVYMMKLRDYFIKTLEILVKFPFVADYASKRGIFN---HLEIKMIRRSS 637
Query: 970 NFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQ 1029
N +L TFN + ++R++++ DT++ L Q T+ F +L+ +
Sbjct: 638 NRFLGNATFNV--------LHINRESLLMDTLKYLRQ-NTHSFS-----------HLS-R 676
Query: 1030 VKFRGEEAEDAGGVRREFLMLLLKEIL--DPKYGMFKEYEETRSIWFS-EDTFEDQNMYF 1086
V F GE+ D G+ EF L+ K L D K E + +WF+ T ++N Y+
Sbjct: 677 VAFIGEDGIDMRGLSAEFFSLISKSFLKWDKK---ILEVHPSSLVWFNPHHTRGNKNFYY 733
Query: 1087 L 1087
L
Sbjct: 734 L 734
Score = 70 (29.7 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 1031 KFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNM---YF- 1086
+F G + + RE L++ + L F +R + ED + + + +F
Sbjct: 639 RFLGNATFNVLHINRESLLMDTLKYLRQNTHSFSHL--SRVAFIGEDGIDMRGLSAEFFS 696
Query: 1087 LIGKEYVPCTYISKYSMFKEYEETRSIWFS-EDTFEDQNMYFLIGTLCGLAIYN 1139
LI K ++ + K E + +WF+ T ++N Y+L G +CG+A+YN
Sbjct: 697 LISKSFLK--WDKK---ILEVHPSSLVWFNPHHTRGNKNFYYL-GVICGMALYN 744
Score = 62 (26.9 bits), Expect = 5.6e-30, Sum P(3) = 5.6e-30
Identities = 27/90 (30%), Positives = 39/90 (43%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ VF S C+NGSFL+ DE D L + + + E V S V
Sbjct: 392 IKKVFSSAVCLNGSFLKPSLDEQ----------DFDLVGKSFSKLT--DNEKVISEV--- 436
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLP 507
+ L+ SL P E+LR++L LP
Sbjct: 437 -VKVIQQTLLPSLNPKPAHEESLRLYLLLP 465
Score = 58 (25.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 32/103 (31%), Positives = 45/103 (43%)
Query: 305 FRVLNPATQILDVNFERLKECE-REVEQL-KSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
F+ L LD + E L E R ++ L K DE + DLL TV NGS +Q
Sbjct: 757 FKKLLQQKPSLD-DLEELSPVEARSLKNLLKEDEEV-VDLLFLDFTVKGHELVPNGSQIQ 814
Query: 363 VENDEHFSCNSKKFSFIKLSLI-NWFMKLHFSIFGQGFGCVCP 404
V N +K+ + + + N +K F F +GF CP
Sbjct: 815 VNK-----VNRQKYVDLYVDFVFNKSVKTQFEQFTRGFSKGCP 852
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 260 (96.6 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 93/343 (27%), Positives = 158/343 (46%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V+ G HS+AL++ G++F WG +THGQLGL +QS P+ ++ L + V Q A
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQS-PQHLQSLCEIPVAQISA 175
Query: 123 GYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQS---NLVQDSHTTIT-------SL 168
G +H VL+ SGVV + + + G G + V + +L +I+ +L
Sbjct: 176 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
+ G ++T+G+ +GQ+G +NS P+ + L ++ + CG +H+ V +S +
Sbjct: 236 SKGGTVFTFGSGGFGQLG-HNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLI 294
Query: 229 YAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
Y+FG G QL + + V ++ L P + P T ++K+ +G H
Sbjct: 295 YSFGCGMQGQLGNGEQVKQSVPL---P-VLLPTECTE-----------FTMEKLITGEHH 339
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
S K+ N IL +N +R+ +R V + T+ ++ T
Sbjct: 340 SFALFFKNPGNESEKPKSGSNGG--ILTLN-DRM--IDRWVSESDPWPTVKNEI----NT 390
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSKK----FSFIKLSLINWF 387
VF S +NGSFL+ DEH+ + + F +K S F
Sbjct: 391 VFSSAASLNGSFLKTSRDEHYQTSVEHCGLDFDLVKTSFAKLF 433
Score = 202 (76.2 bits), Expect = 6.2e-30, Sum P(4) = 6.2e-30
Identities = 70/235 (29%), Positives = 101/235 (42%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL++ G++F WG +THGQLGL +QS P+ ++ L + V Q AG +H VL
Sbjct: 126 HSMALSNDGQLFVWGENTHGQLGLRKEQAGTQS-PQHLQSLCEIPVAQISAGGNHSFVL- 183
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
SL+ G VF WG ++ GQLGL D K + +P VK L V G
Sbjct: 184 -------SLS----GVVFGWGSNSAGQLGL--GDTKDRFVPTIVKSLCGKKTVSISCGGE 230
Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSN----LVQD------------SHTTITSLN 169
H L+ G V T G G ++ L+ + H T+
Sbjct: 231 HTATLSKGGTVF-TFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEE 289
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRV---ESLVNLPIALIACGANHSFVL 221
S +Y++G GQ+G N + P V + + G +HSF L
Sbjct: 290 SSKLIYSFGCGMQGQLG-NGEQVKQSVPLPVLLPTECTEFTMEKLITGEHHSFAL 343
Score = 183 (69.5 bits), Expect = 7.0e-28, Sum P(4) = 7.0e-28
Identities = 54/197 (27%), Positives = 97/197 (49%)
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS 155
E AD+K + + + + + S+ C G + ++L G V + C P + +++
Sbjct: 62 EDADEKLEPLQLQNERIRSI----VC-GEAGAVLLADDGKVLIMDQSTVCR--PLKSLEN 114
Query: 156 N-LVQ----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
++Q D H+ +L++ G+L+ WG N +GQ+G+ PQ ++SL +P+A
Sbjct: 115 RQVIQIACGDQHSM--ALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQ 172
Query: 211 IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDS 269
I+ G NHSFVLS S ++ +G SA QL + + P ++ V+++ G +
Sbjct: 173 ISAGGNHSFVLSLS-GVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEH 231
Query: 270 LVSHSGGLVVKKIYSGG 286
+ S G V SGG
Sbjct: 232 TATLSKGGTVFTFGSGG 248
Score = 170 (64.9 bits), Expect = 6.2e-30, Sum P(4) = 6.2e-30
Identities = 36/93 (38%), Positives = 61/93 (65%)
Query: 722 ITEYEETRSIWFS-EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILL 780
I E E+ +WF+ T ++N +L G +CG+A+YN IN+ FPLAL+KK+L + L
Sbjct: 715 ILEVHESSLVWFNPHHTRGNKNFYYL-GVICGMALYNRHHINIDFPLALFKKLLQQKPSL 773
Query: 781 QDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
DL++LSP A+SL+++L+ E ++ ++ + F
Sbjct: 774 DDLEELSPVEARSLKNLLEEDEEEVVNLQHLDF 806
Score = 111 (44.1 bits), Expect = 6.2e-30, Sum P(4) = 6.2e-30
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ TVF S +NGSFL+ DEH+ + ++ G+D L + + A++ +SL+S +
Sbjct: 388 INTVFSSAASLNGSFLKTSRDEHYQTSVEHCGLDFDLVKTSF---AKLFAS--KSLISEV 442
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLP 507
L+ SL P EALR++L LP
Sbjct: 443 V----QQTLLPSLNPNPTGVEALRLYLLLP 468
Score = 92 (37.4 bits), Expect = 3.3e-24, Sum P(4) = 3.3e-24
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 989 VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
+ ++R++++ DT++ L Q T+ F PL QV F GE+ D G+ EF
Sbjct: 655 LHINRESVLTDTLQYLRQ-NTHSFMHPL------------QVAFIGEDGIDMRGLSAEFF 701
Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFS-EDTFEDQNMYFL 1087
L+ K ++ + E E+ +WF+ T ++N Y+L
Sbjct: 702 SLISKSFIEWDKKIL-EVHESSLVWFNPHHTRGNKNFYYL 740
Score = 75 (31.5 bits), Expect = 1.8e-22, Sum P(4) = 1.8e-22
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1106 EYEETRSIWFS-EDTFEDQNMYFLIGTLCGLAIYN 1139
E E+ +WF+ T ++N Y+L G +CG+A+YN
Sbjct: 717 EVHESSLVWFNPHHTRGNKNFYYL-GVICGMALYN 750
Score = 62 (26.9 bits), Expect = 3.3e-24, Sum P(4) = 3.3e-24
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 820 MSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNET 876
+ DD+FERLI +F + L+ Q + D T+ T R L L++LQ ++ T
Sbjct: 507 LPDDWFERLIKLFHKESTDLIDQ--ICDETDHQST--RHLKNILEILQMAYQISCST 559
Score = 48 (22.0 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 27/103 (26%), Positives = 44/103 (42%)
Query: 305 FRVLNPATQILDVNFERLKECE-REVEQLKSDETLDQDLLLYLETVFLSPGCM-NGSFLQ 362
F+ L LD + E L E R ++ L ++ + L +L+ + NGS +Q
Sbjct: 763 FKKLLQQKPSLD-DLEELSPVEARSLKNLLEEDEEEVVNLQHLDFTCKGQELVPNGSQIQ 821
Query: 363 VENDEHFSCNSKKFSFIKLSL-INWFMKLHFSIFGQGFGCVCP 404
V N +K+ + + L N +K F F +GF CP
Sbjct: 822 VNK-----VNRQKYVDLYVDLEFNKSVKTQFEQFTRGFSKGCP 859
Score = 40 (19.1 bits), Expect = 6.2e-30, Sum P(4) = 6.2e-30
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 1067 EETRSIW--FSEDTFEDQNMY--FLIGKEYVPCTYISKYSM 1103
E ++ W F E + E++ + FL G E VP +SK ++
Sbjct: 900 ELIKNFWTVFFELSEENKKKFLMFLYGTERVPAGGLSKRAL 940
Score = 40 (19.1 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 336 ETLDQDLLLYLET---VFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSLINWFMKL 390
E++ D L YL F+ P + +F+ + + +++ FS I S I W K+
Sbjct: 660 ESVLTDTLQYLRQNTHSFMHP--LQVAFIGEDGIDMRGLSAEFFSLISKSFIEWDKKI 715
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 195 (73.7 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 36/83 (43%), Positives = 60/83 (72%)
Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
E+ S+WF + +++ FL G LCGL+++N +IN+PFPLALYKK+L++ L+DLK+
Sbjct: 726 EKGSSMWFPVNPKFEKSSYFLFGILCGLSLHNLKVINLPFPLALYKKLLNQKPSLEDLKE 785
Query: 786 LSPTLAKSLQDILDYREPDLEDV 808
LS L ++LQ++L+ D+E++
Sbjct: 786 LSLPLGRNLQEVLNCEAGDIEEL 808
Score = 194 (73.4 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 75/272 (27%), Positives = 125/272 (45%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G HSL L V++ G ++ GQLG + D+ ++ P+ ++ L + V
Sbjct: 29 SGEHHSLLLFSNHRVYSCGDNSWGQLG-QRRDQSTER-PEPIQALNDLHVD--------- 77
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS--QSIPKRVKGLASVSVVQ 119
LV + G HS+A+ G+VF WG + GQLG+ + S + K + G+ + V
Sbjct: 78 LV---SCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQV-- 132
Query: 120 ACAGYSHCLVLTSSGVVTCTHKENG---CGSDP-SQGVQSNL----------VQDSHTTI 165
+C Y + V + G G + SQ + + V T
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHS 192
Query: 166 TSLNSPGELYTWGNNEYGQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L+ G + WG+N GQ+ + N + KP + +L NL + I+CG H+ VL++
Sbjct: 193 FALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 252
Query: 224 SVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG 254
+++ FG S+ QL SP+S + PQLI G
Sbjct: 253 E-GQVFTFGGNSSGQLQPSPRSGQRGPQLIEG 283
Score = 183 (69.5 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 83/324 (25%), Positives = 141/324 (43%)
Query: 52 VQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG 111
++A AG ++ + G +HSLAL++ G VF+WG ++ GQLGL + +SQ+IP++VK
Sbjct: 121 IKALAGIK---IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKS 176
Query: 112 LASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQ--GVQSNLVQDS----HT-- 163
L + + Q AG +H L+ +G G GS+ S + N V++ H+
Sbjct: 177 LEGIPLAQVAAGGTHSFALSLTGT------SFGWGSNRSGQLALSGNKVKEQIYKPHSIG 230
Query: 164 TITSLN----SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
+ +L+ S G +T E GQ+ N++ S P + G S
Sbjct: 231 ALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQ 290
Query: 220 VLSKSVSRL-YAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
+ S + Y + G V L S P P S + + LV +
Sbjct: 291 IECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVD----IE 346
Query: 279 VKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETL 338
VK I++G + VT + S + + P +I+ +N +K+ R + K E
Sbjct: 347 VKDIFAGAHANFVTTRRVSHTRSTGVSMKILP--EIIRINQSLVKKW-RAANKRKDREGA 403
Query: 339 DQDLLLYLETVFLSPGCMNGSFLQ 362
+++ L +F S C+ SFL+
Sbjct: 404 KREISL----IFSSSACLTASFLK 423
Score = 182 (69.1 bits), Expect = 3.1e-28, Sum P(3) = 3.1e-28
Identities = 59/215 (27%), Positives = 103/215 (47%)
Query: 56 AGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV 115
AG S +L + +G HSL L V++ G ++ GQLG + D+ ++ P+ ++ L +
Sbjct: 17 AGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLG-QRRDQSTER-PEPIQALNDL 74
Query: 116 SVVQACAGYSHCLVLTSSGVVTC----THKENGCGSD------PSQ-----GVQSNLVQD 160
V G H + + G V + + G G P++ G++ V
Sbjct: 75 HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSC 134
Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
H +L+ G +++WG N GQ+G+ ++ + PQ+V+SL +P+A +A G HSF
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFA 194
Query: 221 LSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGP 255
LS + + +FG GS S +K + I+ P
Sbjct: 195 LSLTGT---SFGWGSNRSGQLALSGNKVKEQIYKP 226
Score = 178 (67.7 bits), Expect = 8.0e-28, Sum P(3) = 8.0e-28
Identities = 64/245 (26%), Positives = 111/245 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSLAL++ G VF+WG ++ GQLGL + +SQ+IP++VK L + + Q AG +H
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSF 193
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA--DKKSQSIPKRVKGLASVSVVQA 120
L S TG N G++ G Q+ + K+ S+ G +V+
Sbjct: 194 AL-SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 252
Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ---DSHTTITSLNSPGELYTW 177
G SSG + + + G +G+ + Q S+ TI + + G++ +
Sbjct: 253 -EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSL 311
Query: 178 GNNEYGQMGINNS-----NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
G + N+ +T E LV++ + I GA+ +FV ++ VS + G
Sbjct: 312 GRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAHANFVTTRRVSHTRSTG 371
Query: 233 IGSAV 237
+ +
Sbjct: 372 VSMKI 376
Score = 148 (57.2 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 38/104 (36%), Positives = 55/104 (52%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
YL ++V R ++VEDT+R+L Q D +K L V F E +AGGV
Sbjct: 657 YLILKVRRSHLVEDTLRQLRQVEDFDLRKQLSVG------------FINEIRPEAGGVSS 704
Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
EF + +E+ DPKY MF E+ S+WF + +++ YFL G
Sbjct: 705 EFFHCIFEEMTDPKYEMFIYPEKGSSMWFPVNPKFEKSSYFLFG 748
Score = 93 (37.8 bits), Expect = 6.5e-23, Sum P(4) = 6.5e-23
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 1088 IGKEYVPCTYIS----KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
+ E+ C + KY MF E+ S+WF + +++ YFL G LCGL+++N V
Sbjct: 702 VSSEFFHCIFEEMTDPKYEMFIYPEKGSSMWFPVNPKFEKSSYFLFGILCGLSLHNLKV 760
Score = 84 (34.6 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ +F S C+ SFL+ + D + + VD++L +D + + + +S+L
Sbjct: 407 ISLIFSSSACLTASFLK-KRD---AGENNLIDVDLKLARDVFKKL------TTEKWISSL 456
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+L++ L + P EAL +FL LP +P+ + L FA A+
Sbjct: 457 ITTCLEEYLLRDLPYSSPHQEALLVFLLLPECSIMQDPKNWKTLAFEFAKAI 508
Score = 84 (34.6 bits), Expect = 6.5e-23, Sum P(4) = 6.5e-23
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVED 999
++ F+FD +K L++ D +++ M++ + + P YL ++V R ++VED
Sbjct: 619 DFLFVFDLPSKIKLMKCDSFVKL---MSEVMAFPEKMSSPP-----YLILKVRRSHLVED 670
Query: 1000 TIRELAQYTTNDFKKPLKV 1018
T+R+L Q D +K L V
Sbjct: 671 TLRQLRQVEDFDLRKQLSV 689
Score = 45 (20.9 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 196 KPQRVESLVN-LPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
KP+R+++ + + + A G +HS +L + R+Y+ G S QL
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSN-HRVYSCGDNSWGQL 54
Score = 38 (18.4 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 237 VQLDSPKSVHKTP-QLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTK 295
V L+ K VHK QL +I + ++ G + + +G + ++ H+ + T+
Sbjct: 561 VLLEVIKEVHKANCQLPESAFIINELS---GIFNFDAEAGRMFIR-------HNDLDCTE 610
Query: 296 SSDGVLSDDF 305
SSD V+ DF
Sbjct: 611 SSDMVVFSDF 620
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 290 (107.1 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 90/269 (33%), Positives = 136/269 (50%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
++G +SLA+ D G +FTWG + G LG + K+++IP RVK LA+V + QA G
Sbjct: 44 VSGSRNSLAICDDGTMFTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIG--- 99
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA-DKKSQSIPKRV---KGLA-SV 115
G WH LA++D G + WGG+ +GQ G E D+ + + + + K A +
Sbjct: 100 --------G-WHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL 150
Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDPS--QGVQS-NLVQDSHTTITS 167
+V Q AG +H +VLT G V + G S P QG+++ L+ +
Sbjct: 151 TVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLA 210
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L G L WGNNEYGQ+G ++ T + P V+ L +L + IA G HS L+
Sbjct: 211 LEEDGRLLAWGNNEYGQLGTGDTQPT-SHPVPVQGLDDLTLVDIAAGGWHSTALTDK-GE 268
Query: 228 LYAFGIGSAVQL---DSPKSVHKTPQLIH 253
+Y +G G +L D+ KS PQ ++
Sbjct: 269 VYGWGRGEHGRLGLGDNDKSSKMVPQKVN 297
Score = 265 (98.3 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 92/313 (29%), Positives = 139/313 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LA++D G + WGG+ +GQ G E K P R + + + CA
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPL-KDEMGRPVR----RDIVIPKRCA--PKLT 151
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V G HS+ L G V+TWG D K S+P RV+GL +V ++
Sbjct: 152 VRQVAAGGTHSVVLTREGHVWTWGQPW------PPGDIKQISVPVRVQGLENVRLI--AV 203
Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNL-VQ--DSHTTI---------TSL 168
G H L L G ++ + E G G+ +Q + VQ D T + T+L
Sbjct: 204 GAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTAL 263
Query: 169 NSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
GE+Y WG E+G++G+ +N ++ PQ+V L I ++CG HS L++ R
Sbjct: 264 TDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRD-GR 322
Query: 228 LYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
+++FG G +L + V T Q + P I P + + G K I GG
Sbjct: 323 IFSFGRGDHGRLGYGRKV-TTGQPLELP-IKIPPPEGSFNHTDEEEEGKWSAKSIACGGR 380
Query: 288 HSIVTVTKSSDGV 300
H++ V SD +
Sbjct: 381 HTLAIVEWKSDDI 393
Score = 195 (73.7 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 77/253 (30%), Positives = 115/253 (45%)
Query: 16 VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
+ WG GQLG+ + ++K + VV+A YS V + +G +SLA
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWAC-----------VVEALEPYS---VRSVVSGSRNSLA 52
Query: 76 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG- 134
+ D G +FTWG + G LG + K+++IP RVK LA+V + QA G HCL + G
Sbjct: 53 ICDDGTMFTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGR 111
Query: 135 VVTCTHKENG-CGSDP---SQG--VQSNLVQDSHT----TITSLNSPGE----LYTWGNN 180
E G CG +P G V+ ++V T+ + + G L G+
Sbjct: 112 AYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHV 171
Query: 181 -EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
+GQ ++ P RV+ L N + LIA GA H+ L + RL A+G QL
Sbjct: 172 WTWGQPWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLALEED-GRLLAWGNNEYGQL 228
Query: 240 ---DSPKSVHKTP 249
D+ + H P
Sbjct: 229 GTGDTQPTSHPVP 241
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 288 (106.4 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 96/290 (33%), Positives = 143/290 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +SLA+ D G++FTWG + G LG + K++S P VK LA+V +VQA G
Sbjct: 46 GSRNSLAICDDGKLFTWGWNQRGTLG-HPPETKTESTPSLVKSLANVKIVQAAIG----- 99
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQSIPKRV---KGLAS-VSV 117
G WH LA++D G + WGG+ +GQ G E S D+ + + + + K A ++V
Sbjct: 100 ------G-WHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTV 152
Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDPS--QGVQS-NLVQDSHTTITSLN 169
Q AG +H +VLT G V + G S P QG+++ L+ +L
Sbjct: 153 RQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALK 212
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G L+ WGNNEYGQ+G ++ + P V+ L +L + IA G HS L+ +Y
Sbjct: 213 EDGTLWAWGNNEYGQLGTGDTQPR-SYPIPVQGLDDLTLVDIAAGGWHSTALTNE-GEVY 270
Query: 230 AFGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGG 276
+G G +L D+ KS PQ ++ + AGED + GG
Sbjct: 271 GWGRGEHGRLGFGDNDKSSKMLPQKVN---------LLAGEDIIQVSCGG 311
Score = 258 (95.9 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 88/307 (28%), Positives = 132/307 (42%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH LA++D G + WGG+ +GQ G E K P R + + + CA
Sbjct: 99 GGWHCLAVDDQGRAYAWGGNEYGQCG-EEPSKDETGRPVR----RDIVIPKRCA--QQLT 151
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V G HS+ L G V+TWG D K S+P RV+GL +V ++
Sbjct: 152 VRQVAAGGTHSVVLTREGYVWTWGQPW------PPGDIKQISVPVRVQGLENVRLI--AV 203
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGSD-------PSQGVQSNLVQDSHTT---ITSL 168
G H L L G + + + G G P QG+ + D T+L
Sbjct: 204 GAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTAL 263
Query: 169 NSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
+ GE+Y WG E+G++G +N ++ PQ+V L I ++CG HS L++ R
Sbjct: 264 TNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRD-GR 322
Query: 228 LYAFGIGSAVQLDSPKSVHKTPQLIHGP-WIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
+++FG G +L + V T Q + P I P D G + K + GG
Sbjct: 323 IFSFGRGDHGRLGYGRKV-TTGQPLELPIHIPPPEGRFNHTDE--EDDGKWIAKHVACGG 379
Query: 287 DHSIVTV 293
H++ V
Sbjct: 380 RHTLAIV 386
Score = 193 (73.0 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 78/243 (32%), Positives = 111/243 (45%)
Query: 16 VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
V WG GQLGL + ++K LASV V A ++ V + G +SLA
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKE---------LASV--VDALEPFN---VRSVVGGSRNSLA 52
Query: 76 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG- 134
+ D G++FTWG + G LG + K++S P VK LA+V +VQA G HCL + G
Sbjct: 53 ICDDGKLFTWGWNQRGTLG-HPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGR 111
Query: 135 VVTCTHKENG-CGSDPSQG-----VQSNLVQDSHT----TITSLNSPG--------ELYT 176
E G CG +PS+ V+ ++V T+ + + G E Y
Sbjct: 112 AYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYV 171
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
W +GQ ++ P RV+ L N + LIA GA H+ L K L+A+G
Sbjct: 172 W---TWGQPWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLAL-KEDGTLWAWGNNEY 225
Query: 237 VQL 239
QL
Sbjct: 226 GQL 228
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 255 (94.8 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 74/229 (32%), Positives = 114/229 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ + GE++TWG G+LG D S++IP VK +++V V +C G SH +
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHTI 574
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ D V+++GG +G+LG D PK ++ L + + + CA
Sbjct: 575 ALSK-----------DGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVCA 621
Query: 123 GYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQD-SHTTIT----------SLN 169
G L LTS+G V GCGS + ++ L+++ + T I +L+
Sbjct: 622 GSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
E+Y WGNN GQ G NS +TKP++V L + I I+ G +HS
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHS 730
Score = 233 (87.1 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 75/264 (28%), Positives = 123/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+ G++FT+G +G+LGL + K +P+RV L + Q G +
Sbjct: 4151 AD------------GKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLN 4196
Query: 126 HCLVLTSSGVVTCTHKEN-----GCG-----SDPSQ-----GVQSNLVQDSHTTITSLNS 170
H + +++ G + + G G S P + G+ V +L
Sbjct: 4197 HTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTK 4256
Query: 171 PGELYTWGNNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YT+G +G+ +PQ+V L + I IA GA H+ LS S +Y
Sbjct: 4257 DGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALS-STGDVY 4315
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLI 252
A+G S QL + H + P LI
Sbjct: 4316 AWGSNSEGQLGLGHTNHVREPTLI 4339
Score = 225 (84.3 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 70/257 (27%), Positives = 126/257 (49%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G V G ++G+LG ++D L ++V+ A G+ ++TS HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+T+
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVTAD 4152
Query: 134 G-VVTCTHKENG---CGSDPS----------QGVQSNLVQDSHTTITSLNSPGEL-YTWG 178
G + T + + G G+ + +G Q V ++++ G + + +G
Sbjct: 4153 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFG 4212
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
+ +YG++G+ NS T + PQ+V+ L + I +ACG S L+K +Y FG S
Sbjct: 4213 DGDYGKLGLGNS-TAKSSPQKVDILCGIGIKKVACGTQFSVALTKD-GHVYTFGQVSDRL 4270
Query: 239 LDSPKSV---HKTPQLI 252
+ P+ H PQ +
Sbjct: 4271 IGLPEGRARNHNRPQQV 4287
Score = 209 (78.6 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 77/266 (28%), Positives = 121/266 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
H+LA GEVF+WG +G+LG + +Q PK ++G L VV AGY H
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRH---- 522
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
S A+ + GE++TWG G+LG D S++IP VK +++V V + +
Sbjct: 523 --------SAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEVSCGSSH 572
Query: 125 SHCLVLTSSGVVTCTHKENG-CG-SDPS-----------QGVQSNLVQDSHTTITSLNSP 171
+ L V + +NG G D + QG+ V + +L S
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G++Y WG +G +S T +P+ +E L I I+ G +H LS + +YA+
Sbjct: 633 GQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD-NEVYAW 689
Query: 232 G---IGSAVQLDSPKSVHKTPQLIHG 254
G +G Q +S + K P+ + G
Sbjct: 690 GNNSMGQCGQGNSTGPITK-PKKVSG 714
Score = 198 (74.8 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 80/307 (26%), Positives = 147/307 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVSVVQACAGYSH 60
G + + ++ G V G ++G+LGL D +QS K++ + S+ V + G
Sbjct: 411 GQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKKVSSSKG--- 465
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
+ G H+LA GEVF+WG +G+LG + +Q PK ++G L VV
Sbjct: 466 ------SDG--HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVC 515
Query: 120 ACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQD-----------SHTT 164
AGY H +T G + + + G G S+ + + LV+D SHT
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPT-LVKDISNVGEVSCGSSHTI 574
Query: 165 ITSLNSPGE-LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L+ G ++++G + G++G ++N V KP+ +E+L + I + G+ S L+
Sbjct: 575 --ALSKDGRTVWSFGGGDNGKLGHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT- 630
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
S ++YA+G G+ + S ++ P+LI V ++ G+ ++ S ++Y
Sbjct: 631 STGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD---NEVY 687
Query: 284 SGGDHSI 290
+ G++S+
Sbjct: 688 AWGNNSM 694
Score = 188 (71.2 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 78/265 (29%), Positives = 123/265 (46%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
WH L C +V+ WG HGQL E+ ++ +P + V C +C +
Sbjct: 3991 WH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPVAAPSFSQAQQV-VCG--QNCTFV 4041
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
G LA CGE ++G GQ G S D ++ ++G +V +C
Sbjct: 4042 IQANGT--VLA---CGEG-SYG--RLGQ-G-NSDDLHVLTVISALQGFVVTQLVTSCGSD 4091
Query: 125 SHCLVLTSSGVVTC----THKENGCG-SD----PSQ--GVQSN-LVQDS----HTTITSL 168
H + LT SG V + + G G SD P Q +Q +VQ S H+ + +
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4151
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
+ G+L+T+GN +YG++G+ N++ P+RV +L I +ACG NH+ +S S +
Sbjct: 4152 D--GKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMV 4208
Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLI 252
+AFG G +L S K+ PQ +
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKV 4233
Score = 187 (70.9 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 74/261 (28%), Positives = 120/261 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + G++FT+G +G+LGL + K +P+RV L + Q G +H
Sbjct: 4142 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLNHT- 4198
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V ST G S+ V+ +G +G+LGL ++ KS P++V L + + +
Sbjct: 4199 VAVSTDG---SM-------VWAFGDGDYGKLGLGNSTAKSS--PQKVDILCGIGIKKVAC 4246
Query: 123 GYSHCLVLTSSG-VVTCTHKEN---GC--G-----SDPSQ-GVQSNL-VQD-----SHTT 164
G + LT G V T + G G + P Q V S + ++D HT
Sbjct: 4247 GTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTL 4306
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
+L+S G++Y WG+N GQ+G+ ++N V +P + L I I+ G HS +
Sbjct: 4307 --ALSSTGDVYAWGSNSEGQLGLGHTNH-VREPTLITVLQGKNIRQISAGRCHSAAWTAP 4363
Query: 225 VSRLYAFGIGSAVQLDSPKSV 245
A G+ +QL P ++
Sbjct: 4364 PVPPRAPGVSVPLQLGLPDAI 4384
Score = 168 (64.2 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 81/325 (24%), Positives = 140/325 (43%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
EV+ WG ++ QL +E +K PK + ++A G +C + ST G
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKILQ-PKLAPSFSDAQTIEA--G-QYCTFVISTDG----- 422
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSS 133
++ CG+ G ++G+LGL ++ +S + S+ V + G H L T+
Sbjct: 423 SVRACGK----G--SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 134 GVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G V + T K P QG V + ++ GELYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
++G++G +SN+ P V+ + N + ++CG++H+ LSK +++FG G +
Sbjct: 537 EGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 239 LD--SPKSVHKTPQLIH---GPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
L V+K P++I G +I A + SL S G ++Y+ G + +
Sbjct: 594 LGHGDTNRVYK-PKVIEALQGMFIRKVCA--GSQSSLALTSTG----QVYAWGCGACLGC 646
Query: 294 TKSSDGVLSDDFRVLNPATQILDVN 318
S L AT+I+D++
Sbjct: 647 GSSEATALRPKLIEELAATRIVDIS 671
Score = 151 (58.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 45/130 (34%), Positives = 63/130 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G+V+ WG LG S++ + PK ++ LA+ +V G SHCL
Sbjct: 622 GSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCL 678
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ H EV+ WG ++ GQ G ++ PK+V GL VS+ Q A
Sbjct: 679 ALS------HD------NEVYAWGNNSMGQCGQGNSTGPITK-PKKVSGLDGVSIQQISA 725
Query: 123 GYSHCLVLTS 132
G SH L T+
Sbjct: 726 GTSHSLAWTA 735
Score = 150 (57.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 67/247 (27%), Positives = 111/247 (44%)
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
TS WH L C +V+ WG HGQL E+ ++ +P + V C G
Sbjct: 3985 TSRPEDWH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPVAAPSFSQAQQV-VC-GQ 4036
Query: 125 SHCLVLTSSG-VVTC---THKENGCGSDPS----------QG-VQSNLV----QDSHTTI 165
+ V+ ++G V+ C ++ G G+ QG V + LV D H+
Sbjct: 4037 NCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM- 4095
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L GE+++WG+ +YG++G NS+ +P+++E+L + ++CG HS V++
Sbjct: 4096 -ALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTAD- 4152
Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLI---HGPWIASPVAMTAGEDSLVSHSGGLVVKK 281
+L+ FG G +L S K P+ + G I VA VS G +V
Sbjct: 4153 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ-VACGLNHTVAVSTDGSMVWA- 4210
Query: 282 IYSGGDH 288
+ GD+
Sbjct: 4211 -FGDGDY 4216
Score = 74 (31.1 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 725 YEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
Y R ++ ++ M F +G L G+AI +++ ++K++ P++L+DL
Sbjct: 4561 YNRDRFLFNPSACLDEHLMQFKFLGILMGVAIRTKKPLDLHLAPMVWKQLCCIPLILEDL 4620
Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
+++ ++L IL +ED GIT N++ ++ D F
Sbjct: 4621 EEVDLLYVQTLNSILH-----IEDS-GITEENFHEMIPLDSF 4656
Score = 50 (22.7 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VK GE A+DAGGV + + + +E+
Sbjct: 4515 KVKLVGEGADDAGGVFDDTITEMCQEL 4541
Score = 47 (21.6 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 321 RLKECEREVEQLKSDETLDQDLLLYLETVFLSP 353
++KE E+E++ K E+ D+D L ++ V P
Sbjct: 2005 QIKEKEQEMKLQKQGESEDEDENLPIQEVSFDP 2037
Score = 39 (18.8 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 1048 LMLLLKEILDPKYGMFKE 1065
L L L + + P+YG KE
Sbjct: 4376 LQLGLPDAIPPQYGALKE 4393
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 270 (100.1 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 80/276 (28%), Positives = 128/276 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H A+ GE+ TWG +GQLG D +Q PK ++ L S + Q G H +
Sbjct: 812 GFCHGAAVRANGELLTWGVGENGQLG--HGDTNNQIEPKIIQSLTSFWITQVQCGEKHTI 869
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
LT G+V++WG +GQLGL D S P +V L +V+Q +
Sbjct: 870 CLTKN------------GKVYSWGASEYGQLGL--GDVTQHSSPMQVSALEKYNVLQIAS 915
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSD---------PS-QGVQSNLVQDSHTTITSLNSPG 172
G +HC VLT+S V G+ PS + + + + H + ++ G
Sbjct: 916 GSTHCAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECG 975
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
++YTWG + ++G + N+T T P+ +E+L N I I+CG H+ L+ S R++ G
Sbjct: 976 DVYTWGTGQ--ELG-HGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDS-GRIFTCG 1031
Query: 233 IGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED 268
S QL P+ I + ++++ GE+
Sbjct: 1032 KDSFGQLGQMSGDQNKPKRIESLTKTTFISVSCGEN 1067
Score = 190 (71.9 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 64/230 (27%), Positives = 103/230 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H++ L G+V++WG +GQLGL D S P +V L +V+Q +G +HC VLT
Sbjct: 867 HTICLTKNGKVYSWGASEYGQLGL--GDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLT 924
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
++ EV +G +G S S+P V L + + + C G+
Sbjct: 925 TSK------------EVLVFGNGA--AMGAASV----VSLPTLVPSLKYLHIDRLCCGHY 966
Query: 126 HCLVLTSSG-VVTC-THKENGCGSD-----P-------SQGVQSNLVQDSHTTITSLNSP 171
+T G V T T +E G G + P +Q ++ HT L
Sbjct: 967 STAAITECGDVYTWGTGQELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAF--LTDS 1024
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
G ++T G + +GQ+G + + KP+R+ESL ++CG N++ L
Sbjct: 1025 GRIFTCGKDSFGQLGQMSGDQN--KPKRIESLTKTTFISVSCGENYNVAL 1072
Score = 173 (66.0 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 68/257 (26%), Positives = 123/257 (47%)
Query: 16 VFTWGGDTHGQLGLE-SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
+ TWG ++ +LG + +A +SQ P+R L + ++ C+ ++G ++S
Sbjct: 715 LMTWGSASNCKLGFKVTAKDQSQPTPER---LPNFNIPDICS---------ISSGSYYSS 762
Query: 75 ALNDCGEVFTWG-GDTHGQ----LGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
L + G+V+ WG G LG+ + Q +P +++ L+ V V G+ H
Sbjct: 763 VLTENGDVYLWGRGAVKTPAVPILGIPQIE--DQLLPFKLESLSDV--VSVSIGFCHGAA 818
Query: 130 LTSSG-VVTCTHKENG-CG-SDPSQGVQSNLVQD-SHTTITS----------LNSPGELY 175
+ ++G ++T ENG G D + ++ ++Q + IT L G++Y
Sbjct: 819 VRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVY 878
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
+WG +EYGQ+G+ + T + P +V +L + IA G+ H VL+ S + FG G+
Sbjct: 879 SWGASEYGQLGLGDV-TQHSSPMQVSALEKYNVLQIASGSTHCAVLTTS-KEVLVFGNGA 936
Query: 236 AVQLDSPKSVHKTPQLI 252
A+ SV P L+
Sbjct: 937 AM---GAASVVSLPTLV 950
Score = 41 (19.5 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 322 LKECEREVEQLKSDETLDQDLLLYLETVFLSP 353
LKECE+ K +T D L ++ + P
Sbjct: 1212 LKECEKLALDRKKIDTDDDSKEFNLRSLLIEP 1243
Score = 40 (19.1 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 460 DTIARIERESVRSLVSN--LAILASHAHLVKSL 490
D+I+ RE V+ + N L I+ + + LVK L
Sbjct: 1985 DSISTTSREEVQKDIRNIHLLIVKNLSKLVKQL 2017
Score = 38 (18.4 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKY 1101
L K+ P G KE E+ DT +D + L P IS+Y
Sbjct: 1200 LCKKQTAPIIGYLKECEKLALDRKKIDTDDDSKEFNLRSLLIEPLNIISRY 1250
Score = 38 (18.4 bits), Expect = 8.0e-16, Sum P(3) = 8.0e-16
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 983 LNQYLEVEVSRDNIVEDTIRELAQYTTND 1011
+N+++ V+R N D + + YT++D
Sbjct: 1957 VNRFIIGNVTRLNNYFDKLTNVPMYTSSD 1985
>UNIPROTKB|I3LVA1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 GO:GO:0005634 GO:GO:0005737 GO:GO:0016567
GO:GO:0004842 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
Ensembl:ENSSSCT00000026224 OMA:ANSTEDH Uniprot:I3LVA1
Length = 369
Score = 236 (88.1 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 44/95 (46%), Positives = 65/95 (68%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y E S +WF + + M FL G LCGL++YN ++N+PFPLAL+KK+LD+
Sbjct: 81 YGLFIYPEDGSCMWFPVNXTRGKKMYFLFGILCGLSLYNLNVVNLPFPLALFKKLLDQKP 140
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSP L KSLQ++L+ D+++ G+ F
Sbjct: 141 SLEDLKELSPLLGKSLQEVLNDEADDIKEELGLCF 175
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 989 VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
++V R ++VEDT+R+L+Q D +K L V I GE GV+ EF
Sbjct: 22 LKVRRSHLVEDTLRQLSQADATDLRKVLVVEFIKEICSV------GE------GVKSEFF 69
Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+ +E++ +YG+F E+ +WF + + MYFL G
Sbjct: 70 HCIFEEMIKKEYGLFIYPEDGSCMWFPVNXTRGKKMYFLFG 110
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 259 (96.2 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 75/229 (32%), Positives = 114/229 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ + GE++TWG G+LG D S++IP VK +++V V +C G SH +
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHTI 574
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ D V+++GG +G+LG D PK ++ L + + + CA
Sbjct: 575 ALSK-----------DGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVCA 621
Query: 123 GYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQD-SHTTIT----------SLN 169
G L LTS+G V GCGS + ++ L+++ + T I SL+
Sbjct: 622 GSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLS 681
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
E+Y WGNN GQ G NS +TKP++V L + I I+ G +HS
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 207 (77.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 77/266 (28%), Positives = 121/266 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
H+LA GEVF+WG +G+LG + +Q PK ++G L VV AGY H
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRH---- 522
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
S A+ + GE++TWG G+LG D S++IP VK +++V V + +
Sbjct: 523 --------SAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEVSCGSSH 572
Query: 125 SHCLVLTSSGVVTCTHKENG-CG-SDPS-----------QGVQSNLVQDSHTTITSLNSP 171
+ L V + +NG G D + QG+ V + +L S
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G++Y WG +G +S T +P+ +E L I I+ G +H LS + +YA+
Sbjct: 633 GQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHD-NEVYAW 689
Query: 232 G---IGSAVQLDSPKSVHKTPQLIHG 254
G +G Q +S + K P+ + G
Sbjct: 690 GNNSMGQCGQGNSTGPITK-PKKVSG 714
Score = 201 (75.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 81/307 (26%), Positives = 147/307 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVSVVQACAGYSH 60
G + + ++ G V G ++G+LGL D +QS K++ + S+ V + G
Sbjct: 411 GQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKKVSSSKG--- 465
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
+ G H+LA GEVF+WG +G+LG + +Q PK ++G L VV
Sbjct: 466 ------SDG--HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVC 515
Query: 120 ACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQD-----------SHTT 164
AGY H +T G + + + G G S+ + + LV+D SHT
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPT-LVKDISNVGEVSCGSSHTI 574
Query: 165 ITSLNSPGE-LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L+ G ++++G + G++G ++N V KP+ +E+L + I + G+ S L+
Sbjct: 575 --ALSKDGRTVWSFGGGDNGKLGHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT- 630
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
S ++YA+G G+ + S ++ P+LI V ++ G+ +S S ++Y
Sbjct: 631 STGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHD---NEVY 687
Query: 284 SGGDHSI 290
+ G++S+
Sbjct: 688 AWGNNSM 694
Score = 168 (64.2 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 81/325 (24%), Positives = 140/325 (43%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
EV+ WG ++ QL +E +K PK + ++A G +C + ST G
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKILQ-PKLAPSFSDAQTIEA--G-QYCTFVISTDG----- 422
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSS 133
++ CG+ G ++G+LGL ++ +S + S+ V + G H L T+
Sbjct: 423 SVRACGK----G--SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 134 GVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G V + T K P QG V + ++ GELYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
++G++G +SN+ P V+ + N + ++CG++H+ LSK +++FG G +
Sbjct: 537 EGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 239 LD--SPKSVHKTPQLIH---GPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
L V+K P++I G +I A + SL S G ++Y+ G + +
Sbjct: 594 LGHGDTNRVYK-PKVIEALQGMFIRKVCA--GSQSSLALTSTG----QVYAWGCGACLGC 646
Query: 294 TKSSDGVLSDDFRVLNPATQILDVN 318
S L AT+I+D++
Sbjct: 647 GSSEATALRPKLIEELAATRIVDIS 671
Score = 145 (56.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 43/130 (33%), Positives = 63/130 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G+V+ WG LG S++ + PK ++ LA+ +V G SHCL
Sbjct: 622 GSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCL 678
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ H EV+ WG ++ GQ G ++ PK+V GL +++ Q A
Sbjct: 679 SLS------HD------NEVYAWGNNSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISA 725
Query: 123 GYSHCLVLTS 132
G SH L T+
Sbjct: 726 GTSHSLAWTA 735
Score = 37 (18.1 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 271 VSHSGGLVVKKIYSGGDHSI 290
VS G+ +++I +G HS+
Sbjct: 712 VSGLDGIAIQQISAGTSHSL 731
>UNIPROTKB|E9PBL0 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
EMBL:AC083829 HGNC:HGNC:24368 IPI:IPI00896511
ProteinModelPortal:E9PBL0 SMR:E9PBL0 Ensembl:ENST00000508159
ArrayExpress:E9PBL0 Bgee:E9PBL0 Uniprot:E9PBL0
Length = 662
Score = 215 (80.7 bits), Expect = 4.4e-16, Sum P(3) = 4.4e-16
Identities = 46/100 (46%), Positives = 65/100 (65%)
Query: 720 YGITEYEETRS-IWFS-EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
YG+ Y E S +WF + FE + F G LCGL+++N + N+PFPLAL+KK+LD+
Sbjct: 380 YGMFMYPEGASCMWFPVKPKFEKKRY-FFFGVLCGLSLFNCNVANLPFPLALFKKLLDQM 438
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
L+DLK+LSP L K+LQ +LD + E+VF I F +W
Sbjct: 439 PSLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHFNVHW 478
Score = 168 (64.2 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQME---HAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNI 996
++PFIF+ +K LL D +++E H + + + + L ++ V R+++
Sbjct: 269 HFPFIFNNLSKIKLLHTDTLLKIESKKHKAYLRSAAIEEERESEFALRPTFDLTVRRNHL 328
Query: 997 VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
+ED + +L+Q+ D +K L V+ F GE D GGV++EF L E++
Sbjct: 329 IEDVLNQLSQFENEDLRKELWVS------------FSGEIGYDLGGVKKEFFYCLFAEMI 376
Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
P+YGMF E +WF ++ YF G
Sbjct: 377 QPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 409
Score = 99 (39.9 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG--KEYVPCTYIS----KYSMF 1104
L++++L+ + F+ + + +W S F + Y L G KE+ C + +Y MF
Sbjct: 328 LIEDVLN-QLSQFENEDLRKELWVS---FSGEIGYDLGGVKKEFFYCLFAEMIQPEYGMF 383
Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
E +WF ++ YF G LCGL+++N V
Sbjct: 384 MYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNV 421
Score = 72 (30.4 bits), Expect = 4.4e-16, Sum P(3) = 4.4e-16
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ +F SP C+ GSFL+ + +D+ ++ + + + + ++N+
Sbjct: 53 IQEIFSSPACLTGSFLRKRR----TTEMMPVYLDLNKARNIFKELTQ------KDWITNM 102
Query: 478 AILASHAHLVKSL-WNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFA 526
+L+K L +++PP EAL +F LP E L +PFA
Sbjct: 103 ITTCLKDNLLKRLPFHSPPQ-EALEIFFLLPECPMMHISNNWESLVVPFA 151
Score = 53 (23.7 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 346 LETVFLSPGCMNGSFLQ 362
++ +F SP C+ GSFL+
Sbjct: 53 IQEIFSSPACLTGSFLR 69
Score = 48 (22.0 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 14/69 (20%), Positives = 31/69 (44%)
Query: 805 LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
+ D + ++ + + F +L+ +FK +I L NG++ L+
Sbjct: 157 MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 210
Query: 865 VLQKLNSLN 873
+L+KL+ +N
Sbjct: 211 MLKKLHRVN 219
Score = 47 (21.6 bits), Expect = 4.4e-16, Sum P(3) = 4.4e-16
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 284 SGGDHSIVT-VTKSSDGV-LSDDFRVLNPATQ---ILDVNFERLKECEREVEQLKS 334
+GG+ SI+ + K + V L LN T I DV +R + +RE++++ S
Sbjct: 3 AGGNQSILLWIKKENSYVNLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQEIFS 58
Score = 40 (19.1 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 10/52 (19%), Positives = 22/52 (42%)
Query: 612 QYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQFYVLQRDRTF 663
+ FF P C + + +L + + + LVL +++ ++ TF
Sbjct: 126 EIFFLLPECPMMHISNNWESLVVPFAKVVCKMSDQSSLVLEEYWATLQESTF 177
>UNIPROTKB|I3LA49 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0016567 GO:GO:0005622
GO:GO:0004842 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 GO:GO:0042296 GO:GO:0032020
EMBL:FP015981 Ensembl:ENSSSCT00000030140 OMA:ELVISIQ Uniprot:I3LA49
Length = 363
Score = 229 (85.7 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 720 YGITEYEETRS-IWF-SEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
YG+ Y E S +WF + FE+++ F G LCGL+++N + N+PFPLAL+KK+LD+
Sbjct: 81 YGLFTYPEDASCMWFPARPKFENKSY-FFFGILCGLSLFNCNVANIPFPLALFKKLLDQE 139
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
L+DLK+LSP L +SLQ +LDY + D +F + F +W
Sbjct: 140 PSLEDLKELSPVLGQSLQTLLDYEDDDFGKIFHVHFNMHW 179
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 980 PHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
P TLN + V R +++ED L++Y D ++ L V+ F GE D
Sbjct: 17 PPTLN----LLVRRGHLIEDVFSHLSRYENEDLRRELLVS------------FSGEIGYD 60
Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF-SEDTFEDQNMYFLIG 1089
GGVR EF L +E+ P+YG+F E+ +WF + FE+++ YF G
Sbjct: 61 FGGVRAEFFHCLFEELTQPEYGLFTYPEDASCMWFPARPKFENKS-YFFFG 110
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 231 (86.4 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 84/272 (30%), Positives = 135/272 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
G +HSLA+ GE++ WG + GQLG + + + S+S PKRV+GL +V+V A A
Sbjct: 90 GHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFA---- 145
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+G+ S A+ D G ++ WG GQLGL + +++ +P RV+ LA+ VV+
Sbjct: 146 -------SGVV-SAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHVVKV 196
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQDSHT--TITSLNSPGELYTW 177
G+ H L LT G V + +G + ++++L+ DS T ++ ++ G+L
Sbjct: 197 SLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLL-DSITDGSMKGHHAAGDLNLE 255
Query: 178 GNNE--YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
+ M N +P VE N +A IACG++HS +L + L A G
Sbjct: 256 AAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSA-GSNI 314
Query: 236 AVQLD-SPKSVHKTPQLIHGPWIASPVAMTAG 266
QL S + + P I SP+++ AG
Sbjct: 315 YGQLGRSKQDLGMKPVDI----TESPISIAAG 342
Score = 152 (58.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 74/270 (27%), Positives = 117/270 (43%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S A+ D G ++ WG GQLGL + +++ +P RV+ LA+ VV+ G+ H L LT
Sbjct: 150 SAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHVVKVSLGWGHALALTV 208
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
G+VF WG G++G ++ + G S+ A +
Sbjct: 209 D------------GKVFGWGYVADGRVGNVGLPLEASLLDSITDG--SMKGHHAAGDLN- 253
Query: 127 CLVLTSSGVVTCTHKENGC--GSDPS--QGVQSNLVQD-----SHTTITSLNSPGELYTW 177
L VV KEN +P + + V D H+ I L G L +
Sbjct: 254 -LEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLI--LCHDGTLLSA 310
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR-LYAFGIGSA 236
G+N YGQ+G + + + KP V+ + PI+ IA G HS + R + ++G +
Sbjct: 311 GSNIYGQLGRSKQDLGM-KP--VD-ITESPIS-IAAGLGHSLAICNRGERNILSWGWNRS 365
Query: 237 VQLDSPKSVHKTPQLIHGPWIASPVAMTAG 266
QL K P+ + G SP +++AG
Sbjct: 366 RQLGRGKP-ENLPREVEGFDGESPASVSAG 394
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/133 (32%), Positives = 67/133 (50%)
Query: 3 GLWHSLALNDCGE--VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
GL HSLA+ + GE + +WG + QLG K +++P+ V+G S AG H
Sbjct: 342 GLGHSLAICNRGERNILSWGWNRSRQLGRG----KPENLPREVEGFDGESPASVSAGRVH 397
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQ 119
SL + + GE + WG +G+LGL S+D+ + + V+G V+Q
Sbjct: 398 ------------SLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGC----VLQ 441
Query: 120 ACAGYSHCLVLTS 132
A AG+ H L+L +
Sbjct: 442 AVAGFDHSLILVA 454
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 237 (88.5 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 82/295 (27%), Positives = 143/295 (48%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G V G ++G+LG ++D L ++V+ A G+ ++TS HS
Sbjct: 3303 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 3351
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+TS
Sbjct: 3352 MALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVTSD 3409
Query: 134 G-VVTCTHKENG---CGSDPS----------QGVQSNLVQDSHTTITSLNSPGEL-YTWG 178
G + T + + G G+ + +G Q V ++++ G + + +G
Sbjct: 3410 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFG 3469
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
+ +YG++G+ NS T + PQ+V+ L + I +ACG S L+K +Y FG +
Sbjct: 3470 DGDYGKLGLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIG 3527
Query: 239 LDSPKSV-HKTPQLIHGPWIASPVA--MTAG-EDSLVSHSGGLVVKKIYSGGDHS 289
L ++ H PQ I P +A V + G E +L S G +Y+ G +S
Sbjct: 3528 LPEGRARNHNRPQQI--PVLAGVVIEDVAVGAEHTLALASTG----DVYAWGSNS 3576
Score = 236 (88.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 73/264 (27%), Positives = 124/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+T
Sbjct: 3350 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVT 3407
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
S G++FT+G +G+LGL + K +P+RV L + Q G +
Sbjct: 3408 SD------------GKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLN 3453
Query: 126 HCLVLTSSGVVTCTHKEN-----GCG-----SDPSQ-----GVQSNLVQDSHTTITSLNS 170
H L +++ G + + G G S P + G+ V +L
Sbjct: 3454 HTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 3513
Query: 171 PGELYTWGNNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YT+G + +G+ +PQ++ L + I +A GA H+ L+ S +Y
Sbjct: 3514 DGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA-STGDVY 3570
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLI 252
A+G S QL + H + P L+
Sbjct: 3571 AWGSNSEGQLGLGHTNHVREPTLV 3594
Score = 196 (74.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 71/259 (27%), Positives = 115/259 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + G++FT+G +G+LGL + K +P+RV L + Q G +H L
Sbjct: 3399 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLNHTL 3456
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+++ D V+ +G +G+LGL ++ KS P++V L + + +
Sbjct: 3457 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 3503
Query: 123 GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GV--QSNLVQDSHTTIT 166
G + LT G V ++ G + P Q GV + V HT
Sbjct: 3504 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTL-- 3561
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L S G++Y WG+N GQ+G+ ++N V +P V L I I+ G HS +
Sbjct: 3562 ALASTGDVYAWGSNSEGQLGLGHTNH-VREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 3620
Query: 227 RLYAFGIGSAVQLDSPKSV 245
A G+ +QL P +V
Sbjct: 3621 PPRAPGVSVPLQLGLPDAV 3639
Score = 192 (72.6 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 79/265 (29%), Positives = 123/265 (46%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
WH L C +V+ WG HGQL E+ ++ +P + V C +C +
Sbjct: 3248 WH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQQV-ICG--QNCTFV 3298
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
G LA CGE ++G GQ G S D ++ ++G +V +C
Sbjct: 3299 IQANGT--VLA---CGEG-SYG--RLGQ-G-NSDDLHVLTVISALQGFVVTQLVTSCGSD 3348
Query: 125 SHCLVLTSSGVVTC----THKENGCG-SD----PSQ--GVQSN-LVQDS----HTTITSL 168
H + LT SG V + + G G SD P Q +Q +VQ S H+ + +
Sbjct: 3349 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT- 3407
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
S G+L+T+GN +YG++G+ N++ P+RV +L I +ACG NH+ +S S +
Sbjct: 3408 -SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV 3465
Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLI 252
+AFG G +L S K+ PQ +
Sbjct: 3466 WAFGDGDYGKLGLGNSTAKSSPQKV 3490
Score = 153 (58.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 67/247 (27%), Positives = 111/247 (44%)
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
TS WH L C +V+ WG HGQL E+ ++ +P + Q G
Sbjct: 3242 TSRPEDWH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQ--QVICGQ 3293
Query: 125 SHCLVLTSSG-VVTC---THKENGCGSDPS----------QG-VQSNLV----QDSHTTI 165
+ V+ ++G V+ C ++ G G+ QG V + LV D H+
Sbjct: 3294 NCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM- 3352
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L GE+++WG+ +YG++G NS+ +P+++E+L + ++CG HS V++ S
Sbjct: 3353 -ALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVT-SD 3409
Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLI---HGPWIASPVAMTAGEDSLVSHSGGLVVKK 281
+L+ FG G +L S K P+ + G I VA VS G +V
Sbjct: 3410 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ-VACGLNHTLAVSADGSMVWA- 3467
Query: 282 IYSGGDH 288
+ GD+
Sbjct: 3468 -FGDGDY 3473
Score = 67 (28.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 725 YEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
Y R ++ ++ M F +G L G+AI +++ ++K++ P+ L+DL
Sbjct: 3816 YNRDRFLFNPSACLDEHLMQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDL 3875
Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
+++ ++L IL +ED GIT +++ ++ D F
Sbjct: 3876 EEVDLLYVQTLNSILH-----IEDS-GITEESFHEMIPLDSF 3911
Score = 61 (26.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTS 66
PK+V GL +++ Q AG SH L T+
Sbjct: 16 PKKVSGLDGIAIQQISAGTSHSLAWTA 42
Score = 50 (22.7 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VK GE A+DAGGV + + + +E+
Sbjct: 3770 KVKLVGEGADDAGGVFDDTITEMCQEL 3796
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 256 (95.2 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 74/229 (32%), Positives = 114/229 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ + GE++TWG G+LG D S++IP VK +++V V +C G SH +
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHTI 574
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ D V+++GG +G+LG D PK ++ L + + + CA
Sbjct: 575 ALSK-----------DGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVCA 621
Query: 123 GYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQD-SHTTIT----------SLN 169
G L LTS+G V GCGS + ++ L+++ + T I +L+
Sbjct: 622 GSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
E+Y WGNN GQ G NS +TKP++V L + I I+ G +HS
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 237 (88.5 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 82/295 (27%), Positives = 143/295 (48%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G V G ++G+LG ++D L ++V+ A G+ ++TS HS
Sbjct: 4041 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4089
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+TS
Sbjct: 4090 MALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVTSD 4147
Query: 134 G-VVTCTHKENG---CGSDPS----------QGVQSNLVQDSHTTITSLNSPGEL-YTWG 178
G + T + + G G+ + +G Q V ++++ G + + +G
Sbjct: 4148 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFG 4207
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
+ +YG++G+ NS T + PQ+V+ L + I +ACG S L+K +Y FG +
Sbjct: 4208 DGDYGKLGLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIG 4265
Query: 239 LDSPKSV-HKTPQLIHGPWIASPVA--MTAG-EDSLVSHSGGLVVKKIYSGGDHS 289
L ++ H PQ I P +A V + G E +L S G +Y+ G +S
Sbjct: 4266 LPEGRARNHNRPQQI--PVLAGVVIEDVAVGAEHTLALASTG----DVYAWGSNS 4314
Score = 236 (88.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 73/264 (27%), Positives = 124/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+T
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVT 4145
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
S G++FT+G +G+LGL + K +P+RV L + Q G +
Sbjct: 4146 SD------------GKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLN 4191
Query: 126 HCLVLTSSGVVTCTHKEN-----GCG-----SDPSQ-----GVQSNLVQDSHTTITSLNS 170
H L +++ G + + G G S P + G+ V +L
Sbjct: 4192 HTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4251
Query: 171 PGELYTWGNNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YT+G + +G+ +PQ++ L + I +A GA H+ L+ S +Y
Sbjct: 4252 DGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA-STGDVY 4308
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLI 252
A+G S QL + H + P L+
Sbjct: 4309 AWGSNSEGQLGLGHTNHVREPTLV 4332
Score = 209 (78.6 bits), Expect = 5.2e-10, Sum P(4) = 5.2e-10
Identities = 77/266 (28%), Positives = 121/266 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
H+LA GEVF+WG +G+LG + +Q PK ++G L VV AGY H
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRH---- 522
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
S A+ + GE++TWG G+LG D S++IP VK +++V V + +
Sbjct: 523 --------SAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEVSCGSSH 572
Query: 125 SHCLVLTSSGVVTCTHKENG-CG-SDPS-----------QGVQSNLVQDSHTTITSLNSP 171
+ L V + +NG G D + QG+ V + +L S
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G++Y WG +G +S T +P+ +E L I I+ G +H LS + +YA+
Sbjct: 633 GQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD-NEVYAW 689
Query: 232 G---IGSAVQLDSPKSVHKTPQLIHG 254
G +G Q +S + K P+ + G
Sbjct: 690 GNNSMGQCGQGNSTGPITK-PKKVSG 714
Score = 198 (74.8 bits), Expect = 6.8e-09, Sum P(4) = 6.8e-09
Identities = 80/307 (26%), Positives = 147/307 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVSVVQACAGYSH 60
G + + ++ G V G ++G+LGL D +QS K++ + S+ V + G
Sbjct: 411 GQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKKVSSSKG--- 465
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
+ G H+LA GEVF+WG +G+LG + +Q PK ++G L VV
Sbjct: 466 ------SDG--HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVC 515
Query: 120 ACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQD-----------SHTT 164
AGY H +T G + + + G G S+ + + LV+D SHT
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPT-LVKDISNVGEVSCGSSHTI 574
Query: 165 ITSLNSPGE-LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L+ G ++++G + G++G ++N V KP+ +E+L + I + G+ S L+
Sbjct: 575 --ALSKDGRTVWSFGGGDNGKLGHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT- 630
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
S ++YA+G G+ + S ++ P+LI V ++ G+ ++ S ++Y
Sbjct: 631 STGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD---NEVY 687
Query: 284 SGGDHSI 290
+ G++S+
Sbjct: 688 AWGNNSM 694
Score = 195 (73.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 70/259 (27%), Positives = 115/259 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + G++FT+G +G+LGL + K +P+RV L + Q G +H L
Sbjct: 4137 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLNHTL 4194
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+++ D V+ +G +G+LGL ++ KS P++V L + + +
Sbjct: 4195 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4241
Query: 123 GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GV--QSNLVQDSHTTIT 166
G + LT G V ++ G + P Q GV + V HT
Sbjct: 4242 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTL-- 4299
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L S G++Y WG+N GQ+G+ ++N V +P V L + I+ G HS +
Sbjct: 4300 ALASTGDVYAWGSNSEGQLGLGHTNH-VREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4358
Query: 227 RLYAFGIGSAVQLDSPKSV 245
A G+ +QL P +V
Sbjct: 4359 PPRAPGVSVPLQLGLPDTV 4377
Score = 192 (72.6 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 79/265 (29%), Positives = 123/265 (46%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
WH L C +V+ WG HGQL E+ ++ +P + V C +C +
Sbjct: 3986 WH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQQV-ICG--QNCTFV 4036
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
G LA CGE ++G GQ G S D ++ ++G +V +C
Sbjct: 4037 IQANGT--VLA---CGEG-SYG--RLGQ-G-NSDDLHVLTVISALQGFVVTQLVTSCGSD 4086
Query: 125 SHCLVLTSSGVVTC----THKENGCG-SD----PSQ--GVQSN-LVQDS----HTTITSL 168
H + LT SG V + + G G SD P Q +Q +VQ S H+ + +
Sbjct: 4087 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT- 4145
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
S G+L+T+GN +YG++G+ N++ P+RV +L I +ACG NH+ +S S +
Sbjct: 4146 -SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV 4203
Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLI 252
+AFG G +L S K+ PQ +
Sbjct: 4204 WAFGDGDYGKLGLGNSTAKSSPQKV 4228
Score = 168 (64.2 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 81/325 (24%), Positives = 140/325 (43%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
EV+ WG ++ QL +E +K PK + ++A G +C + ST G
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKILQ-PKLAPSFSDAQTIEA--G-QYCTFVISTDG----- 422
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSS 133
++ CG+ G ++G+LGL ++ +S + S+ V + G H L T+
Sbjct: 423 SVRACGK----G--SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 134 GVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G V + T K P QG V + ++ GELYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
++G++G +SN+ P V+ + N + ++CG++H+ LSK +++FG G +
Sbjct: 537 EGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 239 LD--SPKSVHKTPQLIH---GPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
L V+K P++I G +I A + SL S G ++Y+ G + +
Sbjct: 594 LGHGDTNRVYK-PKVIEALQGMFIRKVCA--GSQSSLALTSTG----QVYAWGCGACLGC 646
Query: 294 TKSSDGVLSDDFRVLNPATQILDVN 318
S L AT+I+D++
Sbjct: 647 GSSEATALRPKLIEELAATRIVDIS 671
Score = 153 (58.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 67/247 (27%), Positives = 111/247 (44%)
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
TS WH L C +V+ WG HGQL E+ ++ +P + Q G
Sbjct: 3980 TSRPEDWH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQ--QVICGQ 4031
Query: 125 SHCLVLTSSG-VVTC---THKENGCGSDPS----------QG-VQSNLV----QDSHTTI 165
+ V+ ++G V+ C ++ G G+ QG V + LV D H+
Sbjct: 4032 NCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM- 4090
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L GE+++WG+ +YG++G NS+ +P+++E+L + ++CG HS V++ S
Sbjct: 4091 -ALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVT-SD 4147
Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLI---HGPWIASPVAMTAGEDSLVSHSGGLVVKK 281
+L+ FG G +L S K P+ + G I VA VS G +V
Sbjct: 4148 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ-VACGLNHTLAVSADGSMVWA- 4205
Query: 282 IYSGGDH 288
+ GD+
Sbjct: 4206 -FGDGDY 4211
Score = 147 (56.8 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 43/130 (33%), Positives = 63/130 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G+V+ WG LG S++ + PK ++ LA+ +V G SHCL
Sbjct: 622 GSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCL 678
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ H EV+ WG ++ GQ G ++ PK+V GL +++ Q A
Sbjct: 679 ALS------HD------NEVYAWGNNSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISA 725
Query: 123 GYSHCLVLTS 132
G SH L T+
Sbjct: 726 GTSHSLAWTA 735
Score = 67 (28.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 725 YEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
Y R ++ ++ M F +G L G+AI +++ ++K++ P+ L+DL
Sbjct: 4554 YNRDRFLFNPSACLDEHLMQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDL 4613
Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
+++ ++L IL +ED GIT +++ ++ D F
Sbjct: 4614 EEVDLLYVQTLNSILH-----IEDS-GITEESFHEMIPLDSF 4649
Score = 50 (22.7 bits), Expect = 3.9e-13, Sum P(4) = 3.9e-13
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VK GE A+DAGGV + + + +E+
Sbjct: 4508 KVKLVGEGADDAGGVFDDTITEMCQEL 4534
Score = 43 (20.2 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 321 RLKECEREVEQLKSDETLDQDLLLYLETVFLSP 353
++KE E+E++ K E ++D L ++ V P
Sbjct: 2002 QIKEKEQEIKLQKQGELEEEDENLPIQEVSFDP 2034
Score = 43 (20.2 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 140 HKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
H+ G D Q ++S D+ T +TS + G + NE ++++
Sbjct: 2417 HESEEKG-DVEQKIESESALDTRTGLTSDDVKGTTSSKSENEIASFSLDSA 2466
Score = 37 (18.1 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 271 VSHSGGLVVKKIYSGGDHSI 290
VS G+ +++I +G HS+
Sbjct: 712 VSGLDGIAIQQISAGTSHSL 731
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 256 (95.2 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 74/229 (32%), Positives = 114/229 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ + GE++TWG G+LG D S++IP VK +++V V +C G SH +
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHTI 574
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ D V+++GG +G+LG D PK ++ L + + + CA
Sbjct: 575 ALSK-----------DGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVCA 621
Query: 123 GYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQD-SHTTIT----------SLN 169
G L LTS+G V GCGS + ++ L+++ + T I +L+
Sbjct: 622 GSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
E+Y WGNN GQ G NS +TKP++V L + I I+ G +HS
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 237 (88.5 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 82/295 (27%), Positives = 143/295 (48%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G V G ++G+LG ++D L ++V+ A G+ ++TS HS
Sbjct: 4044 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4092
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+TS
Sbjct: 4093 MALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVTSD 4150
Query: 134 G-VVTCTHKENG---CGSDPS----------QGVQSNLVQDSHTTITSLNSPGEL-YTWG 178
G + T + + G G+ + +G Q V ++++ G + + +G
Sbjct: 4151 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFG 4210
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
+ +YG++G+ NS T + PQ+V+ L + I +ACG S L+K +Y FG +
Sbjct: 4211 DGDYGKLGLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIG 4268
Query: 239 LDSPKSV-HKTPQLIHGPWIASPVA--MTAG-EDSLVSHSGGLVVKKIYSGGDHS 289
L ++ H PQ I P +A V + G E +L S G +Y+ G +S
Sbjct: 4269 LPEGRARNHNRPQQI--PVLAGVVIEDVAVGAEHTLALASTG----DVYAWGSNS 4317
Score = 236 (88.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 73/264 (27%), Positives = 124/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
S G++FT+G +G+LGL + K +P+RV L + Q G +
Sbjct: 4149 SD------------GKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLN 4194
Query: 126 HCLVLTSSGVVTCTHKEN-----GCG-----SDPSQ-----GVQSNLVQDSHTTITSLNS 170
H L +++ G + + G G S P + G+ V +L
Sbjct: 4195 HTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4254
Query: 171 PGELYTWGNNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YT+G + +G+ +PQ++ L + I +A GA H+ L+ S +Y
Sbjct: 4255 DGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA-STGDVY 4311
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLI 252
A+G S QL + H + P L+
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLV 4335
Score = 209 (78.6 bits), Expect = 5.2e-10, Sum P(4) = 5.2e-10
Identities = 77/266 (28%), Positives = 121/266 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
H+LA GEVF+WG +G+LG + +Q PK ++G L VV AGY H
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRH---- 522
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
S A+ + GE++TWG G+LG D S++IP VK +++V V + +
Sbjct: 523 --------SAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEVSCGSSH 572
Query: 125 SHCLVLTSSGVVTCTHKENG-CG-SDPS-----------QGVQSNLVQDSHTTITSLNSP 171
+ L V + +NG G D + QG+ V + +L S
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G++Y WG +G +S T +P+ +E L I I+ G +H LS + +YA+
Sbjct: 633 GQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD-NEVYAW 689
Query: 232 G---IGSAVQLDSPKSVHKTPQLIHG 254
G +G Q +S + K P+ + G
Sbjct: 690 GNNSMGQCGQGNSTGPITK-PKKVSG 714
Score = 198 (74.8 bits), Expect = 6.8e-09, Sum P(4) = 6.8e-09
Identities = 80/307 (26%), Positives = 147/307 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVSVVQACAGYSH 60
G + + ++ G V G ++G+LGL D +QS K++ + S+ V + G
Sbjct: 411 GQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKKVSSSKG--- 465
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
+ G H+LA GEVF+WG +G+LG + +Q PK ++G L VV
Sbjct: 466 ------SDG--HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVC 515
Query: 120 ACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQD-----------SHTT 164
AGY H +T G + + + G G S+ + + LV+D SHT
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPT-LVKDISNVGEVSCGSSHTI 574
Query: 165 ITSLNSPGE-LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L+ G ++++G + G++G ++N V KP+ +E+L + I + G+ S L+
Sbjct: 575 --ALSKDGRTVWSFGGGDNGKLGHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT- 630
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
S ++YA+G G+ + S ++ P+LI V ++ G+ ++ S ++Y
Sbjct: 631 STGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD---NEVY 687
Query: 284 SGGDHSI 290
+ G++S+
Sbjct: 688 AWGNNSM 694
Score = 195 (73.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 70/259 (27%), Positives = 115/259 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + G++FT+G +G+LGL + K +P+RV L + Q G +H L
Sbjct: 4140 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLNHTL 4197
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+++ D V+ +G +G+LGL ++ KS P++V L + + +
Sbjct: 4198 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4244
Query: 123 GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GV--QSNLVQDSHTTIT 166
G + LT G V ++ G + P Q GV + V HT
Sbjct: 4245 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTL-- 4302
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L S G++Y WG+N GQ+G+ ++N V +P V L + I+ G HS +
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNH-VREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4361
Query: 227 RLYAFGIGSAVQLDSPKSV 245
A G+ +QL P +V
Sbjct: 4362 PPRAPGVSVPLQLGLPDAV 4380
Score = 192 (72.6 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 79/265 (29%), Positives = 123/265 (46%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
WH L C +V+ WG HGQL E+ ++ +P + V C +C +
Sbjct: 3989 WH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQQV-ICG--QNCTFV 4039
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
G LA CGE ++G GQ G S D ++ ++G +V +C
Sbjct: 4040 IQANGT--VLA---CGEG-SYG--RLGQ-G-NSDDLHVLTVISALQGFVVTQLVTSCGSD 4089
Query: 125 SHCLVLTSSGVVTC----THKENGCG-SD----PSQ--GVQSN-LVQDS----HTTITSL 168
H + LT SG V + + G G SD P Q +Q +VQ S H+ + +
Sbjct: 4090 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT- 4148
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
S G+L+T+GN +YG++G+ N++ P+RV +L I +ACG NH+ +S S +
Sbjct: 4149 -SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV 4206
Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLI 252
+AFG G +L S K+ PQ +
Sbjct: 4207 WAFGDGDYGKLGLGNSTAKSSPQKV 4231
Score = 168 (64.2 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 81/325 (24%), Positives = 140/325 (43%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
EV+ WG ++ QL +E +K PK + ++A G +C + ST G
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKILQ-PKLAPSFSDAQTIEA--G-QYCTFVISTDG----- 422
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSS 133
++ CG+ G ++G+LGL ++ +S + S+ V + G H L T+
Sbjct: 423 SVRACGK----G--SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 134 GVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G V + T K P QG V + ++ GELYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
++G++G +SN+ P V+ + N + ++CG++H+ LSK +++FG G +
Sbjct: 537 EGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 239 LD--SPKSVHKTPQLIH---GPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
L V+K P++I G +I A + SL S G ++Y+ G + +
Sbjct: 594 LGHGDTNRVYK-PKVIEALQGMFIRKVCA--GSQSSLALTSTG----QVYAWGCGACLGC 646
Query: 294 TKSSDGVLSDDFRVLNPATQILDVN 318
S L AT+I+D++
Sbjct: 647 GSSEATALRPKLIEELAATRIVDIS 671
Score = 153 (58.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 67/247 (27%), Positives = 111/247 (44%)
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
TS WH L C +V+ WG HGQL E+ ++ +P + Q G
Sbjct: 3983 TSRPEDWH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQ--QVICGQ 4034
Query: 125 SHCLVLTSSG-VVTC---THKENGCGSDPS----------QG-VQSNLV----QDSHTTI 165
+ V+ ++G V+ C ++ G G+ QG V + LV D H+
Sbjct: 4035 NCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM- 4093
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L GE+++WG+ +YG++G NS+ +P+++E+L + ++CG HS V++ S
Sbjct: 4094 -ALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVT-SD 4150
Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLI---HGPWIASPVAMTAGEDSLVSHSGGLVVKK 281
+L+ FG G +L S K P+ + G I VA VS G +V
Sbjct: 4151 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ-VACGLNHTLAVSADGSMVWA- 4208
Query: 282 IYSGGDH 288
+ GD+
Sbjct: 4209 -FGDGDY 4214
Score = 147 (56.8 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 43/130 (33%), Positives = 63/130 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G+V+ WG LG S++ + PK ++ LA+ +V G SHCL
Sbjct: 622 GSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCL 678
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ H EV+ WG ++ GQ G ++ PK+V GL +++ Q A
Sbjct: 679 ALS------HD------NEVYAWGNNSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISA 725
Query: 123 GYSHCLVLTS 132
G SH L T+
Sbjct: 726 GTSHSLAWTA 735
Score = 67 (28.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 725 YEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
Y R ++ ++ M F +G L G+AI +++ ++K++ P+ L+DL
Sbjct: 4557 YNRDRFLFNPSACLDEHLMQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDL 4616
Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
+++ ++L IL +ED GIT +++ ++ D F
Sbjct: 4617 EEVDLLYVQTLNSILH-----IEDS-GITEESFHEMIPLDSF 4652
Score = 50 (22.7 bits), Expect = 3.9e-13, Sum P(4) = 3.9e-13
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VK GE A+DAGGV + + + +E+
Sbjct: 4511 KVKLVGEGADDAGGVFDDTITEMCQEL 4537
Score = 43 (20.2 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 321 RLKECEREVEQLKSDETLDQDLLLYLETVFLSP 353
++KE E+E++ K E ++D L ++ V P
Sbjct: 2003 QIKEKEQEIKLQKQGELEEEDENLPIQEVSFDP 2035
Score = 43 (20.2 bits), Expect = 3.9e-13, Sum P(4) = 3.9e-13
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 934 TRDFLCNYPFIFDA 947
TRD+LCN + F++
Sbjct: 1565 TRDWLCNSSYSFES 1578
Score = 37 (18.1 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 271 VSHSGGLVVKKIYSGGDHSI 290
VS G+ +++I +G HS+
Sbjct: 712 VSGLDGIAIQQISAGTSHSL 731
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 256 (95.2 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 74/229 (32%), Positives = 114/229 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ + GE++TWG G+LG D S++IP VK +++V V +C G SH +
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHTI 574
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ D V+++GG +G+LG D PK ++ L + + + CA
Sbjct: 575 ALSK-----------DGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVCA 621
Query: 123 GYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQD-SHTTIT----------SLN 169
G L LTS+G V GCGS + ++ L+++ + T I +L+
Sbjct: 622 GSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALS 681
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
E+Y WGNN GQ G NS +TKP++V L + I I+ G +HS
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 237 (88.5 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 81/294 (27%), Positives = 142/294 (48%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G V G ++G+LG ++D L ++V+ A G+ ++TS HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+TS
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVTSD 4152
Query: 134 G-VVTCTHKENG---CGSDPS----------QGVQSNLVQDSHTTITSLNSPGEL-YTWG 178
G + T + + G G+ + +G Q V ++++ G + + +G
Sbjct: 4153 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFG 4212
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
+ +YG++G+ NS T + PQ+++ L + I +ACG S L+K +Y FG +
Sbjct: 4213 DGDYGKLGLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIG 4270
Query: 239 LDSPKSV-HKTPQLIH--GPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
L ++ H PQ I I VA+ A E +L S G +Y+ G +S
Sbjct: 4271 LPEGRARNHNRPQQIPVLAGVIIEDVAVGA-EHTLALASNG----DVYAWGSNS 4319
Score = 236 (88.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 73/266 (27%), Positives = 125/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
S G++FT+G +G+LGL + K +P+RV L + Q G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLN 4196
Query: 126 HCLVLTSSGVVTCTHKEN-----GCG-----SDPSQ-----GVQSNLVQDSHTTITSLNS 170
H L +++ G + + G G S P + G+ V +L
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTK 4256
Query: 171 PGELYTWGNNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YT+G + +G+ +PQ++ L + I +A GA H+ L+ + +Y
Sbjct: 4257 DGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN-GDVY 4313
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHG 254
A+G S QL + H + P L+ G
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTG 4339
Score = 208 (78.3 bits), Expect = 6.6e-10, Sum P(4) = 6.6e-10
Identities = 76/266 (28%), Positives = 121/266 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
H+LA GEVF+WG +G+LG + +Q PK ++G L VV AGY H
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRH---- 522
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
S A+ + GE++TWG G+LG D S++IP VK +++V V + +
Sbjct: 523 --------SAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEVSCGSSH 572
Query: 125 SHCLVLTSSGVVTCTHKENG-CG-SDPS-----------QGVQSNLVQDSHTTITSLNSP 171
+ L V + +NG G D + QG+ V + +L S
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G++Y WG +G +S T +P+ +E L I ++ G +H LS + +YA+
Sbjct: 633 GQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD-NEVYAW 689
Query: 232 G---IGSAVQLDSPKSVHKTPQLIHG 254
G +G Q +S + K P+ + G
Sbjct: 690 GNNSMGQCGQGNSTGPITK-PKKVSG 714
Score = 198 (74.8 bits), Expect = 6.8e-09, Sum P(4) = 6.8e-09
Identities = 80/307 (26%), Positives = 147/307 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVSVVQACAGYSH 60
G + + ++ G V G ++G+LGL D +QS K++ + S+ V + G
Sbjct: 411 GQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKKVSSSKG--- 465
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
+ G H+LA GEVF+WG +G+LG + +Q PK ++G L VV
Sbjct: 466 ------SDG--HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVC 515
Query: 120 ACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQD-----------SHTT 164
AGY H +T G + + + G G S+ + + LV+D SHT
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPT-LVKDISNVGEVSCGSSHTI 574
Query: 165 ITSLNSPGE-LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L+ G ++++G + G++G ++N V KP+ +E+L + I + G+ S L+
Sbjct: 575 --ALSKDGRTVWSFGGGDNGKLGHGDTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALT- 630
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
S ++YA+G G+ + S ++ P+LI V ++ G+ ++ S ++Y
Sbjct: 631 STGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD---NEVY 687
Query: 284 SGGDHSI 290
+ G++S+
Sbjct: 688 AWGNNSM 694
Score = 195 (73.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 66/259 (25%), Positives = 114/259 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + G++FT+G +G+LGL + K +P+RV L + Q G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLNHTL 4199
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+++ D V+ +G +G+LGL ++ KS P+++ L + + +
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4246
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
G + LT G V ++ G + N +++D HT
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTL-- 4304
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L S G++Y WG+N GQ+G+ ++N V +P V L + I+ G HS +
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNH-VREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363
Query: 227 RLYAFGIGSAVQLDSPKSV 245
A G+ +QL P +V
Sbjct: 4364 PPRAPGVSVPLQLGLPDTV 4382
Score = 193 (73.0 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 80/265 (30%), Positives = 123/265 (46%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
WH L C +V+ WG HGQL E+ ++ +P + V C +C +
Sbjct: 3991 WH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQQV-ICG--QNCTFV 4041
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
G LA CGE ++G GQ G S D ++ ++G +V +C
Sbjct: 4042 IQANGT--VLA---CGEG-SYG--RLGQ-G-NSDDLHVLTVISALQGFVVTQLVTSCGSD 4091
Query: 125 SHCLVLTSSGVVTC----THKENGCG-SD----PSQ--GVQSN-LVQDS----HTTITSL 168
H + LT SG V + + G G SD P Q +Q +VQ S H+ + +
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT- 4150
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
S G+L+T+GN +YG++G+ N++ P+RV +L I +ACG NH+ +S S +
Sbjct: 4151 -SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV 4208
Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLI 252
+AFG G +L S K+ PQ I
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKI 4233
Score = 169 (64.5 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 82/325 (25%), Positives = 140/325 (43%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
EV+ WG ++ QL +E +K PK + ++A G +C + ST G
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKILQ-PKLAPSFSDAQTIEA--G-QYCTFVISTDG----- 422
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSS 133
++ CG+ G ++G+LGL ++ +S + S+ V + G H L T+
Sbjct: 423 SVRACGK----G--SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 134 GVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G V + T K P QG V + ++ GELYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
++G++G +SN+ P V+ + N + ++CG++H+ LSK +++FG G +
Sbjct: 537 EGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 239 LD--SPKSVHKTPQLIH---GPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
L V+K P++I G +I A + SL S G ++Y+ G + +
Sbjct: 594 LGHGDTNRVYK-PKVIEALQGMFIRKVCA--GSQSSLALTSTG----QVYAWGCGACLGC 646
Query: 294 TKSSDGVLSDDFRVLNPATQILDVN 318
S L AT+I+DV+
Sbjct: 647 GSSEATALRPKLIEELAATRIVDVS 671
Score = 153 (58.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 67/247 (27%), Positives = 111/247 (44%)
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
TS WH L C +V+ WG HGQL E+ ++ +P + Q G
Sbjct: 3985 TSRPEDWH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQ--QVICGQ 4036
Query: 125 SHCLVLTSSG-VVTC---THKENGCGSDPS----------QG-VQSNLV----QDSHTTI 165
+ V+ ++G V+ C ++ G G+ QG V + LV D H+
Sbjct: 4037 NCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM- 4095
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L GE+++WG+ +YG++G NS+ +P+++E+L + ++CG HS V++ S
Sbjct: 4096 -ALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVT-SD 4152
Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLI---HGPWIASPVAMTAGEDSLVSHSGGLVVKK 281
+L+ FG G +L S K P+ + G I VA VS G +V
Sbjct: 4153 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ-VACGLNHTLAVSADGSMVWA- 4210
Query: 282 IYSGGDH 288
+ GD+
Sbjct: 4211 -FGDGDY 4216
Score = 148 (57.2 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 43/130 (33%), Positives = 63/130 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G+V+ WG LG S++ + PK ++ LA+ +V G SHCL
Sbjct: 622 GSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCL 678
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L+ H EV+ WG ++ GQ G ++ PK+V GL +++ Q A
Sbjct: 679 ALS------HD------NEVYAWGNNSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISA 725
Query: 123 GYSHCLVLTS 132
G SH L T+
Sbjct: 726 GTSHSLAWTA 735
Score = 67 (28.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 725 YEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
Y R ++ ++ M F +G L G+AI +++ ++K++ P+ L+DL
Sbjct: 4559 YNRDRFLFNPSACLDEHLMQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDL 4618
Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
+++ ++L IL +ED GIT +++ ++ D F
Sbjct: 4619 EEVDLLYVQTLNSILH-----IEDS-GITEESFHEMIPLDSF 4654
Score = 50 (22.7 bits), Expect = 3.9e-13, Sum P(4) = 3.9e-13
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VK GE A+DAGGV + + + +E+
Sbjct: 4513 KVKLVGEGADDAGGVFDDTITEMCQEL 4539
Score = 43 (20.2 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 321 RLKECEREVEQLKSDETLDQDLLLYLETVFLSP 353
++KE E+E++ K E ++D L ++ V P
Sbjct: 2005 QIKEKEQEIKLQKQGELEEEDENLPIQEVSFDP 2037
Score = 39 (18.8 bits), Expect = 9.8e-13, Sum P(4) = 9.8e-13
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 934 TRDFLCNYPFIFDA 947
+RD+LCN + F++
Sbjct: 1565 SRDWLCNSSYSFES 1578
Score = 37 (18.1 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 271 VSHSGGLVVKKIYSGGDHSI 290
VS G+ +++I +G HS+
Sbjct: 712 VSGLDGIAIQQISAGTSHSL 731
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 249 (92.7 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 75/230 (32%), Positives = 113/230 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ + GE++TWG G+LG D S++IP VK +++V V +C G SH +
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHTI 574
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG-DTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
L+ D V+++GG D G+LG D PK V+ L + + + C
Sbjct: 575 ALSK-----------DGRTVWSFGGGDNVGKLG--HGDTNRVYKPKVVEALQGMFIRKVC 621
Query: 122 AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQD-SHTTITSLN--------- 169
AG L LTS+G V GCGS + ++ L+++ + T I ++
Sbjct: 622 AGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLF 681
Query: 170 -SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
E+Y WGNN GQ G NS +TKP++V L + I I+ G +HS
Sbjct: 682 VMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 731
Score = 237 (88.5 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 82/295 (27%), Positives = 143/295 (48%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G V G ++G+LG ++D L ++V+ A G+ ++TS HS
Sbjct: 4047 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4095
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+TS
Sbjct: 4096 MALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVTSD 4153
Query: 134 G-VVTCTHKENG---CGSDPS----------QGVQSNLVQDSHTTITSLNSPGEL-YTWG 178
G + T + + G G+ + +G Q V ++++ G + + +G
Sbjct: 4154 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFG 4213
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
+ +YG++G+ NS T + PQ+V+ L + I +ACG S L+K +Y FG +
Sbjct: 4214 DGDYGKLGLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIG 4271
Query: 239 LDSPKSV-HKTPQLIHGPWIASPVA--MTAG-EDSLVSHSGGLVVKKIYSGGDHS 289
L ++ H PQ I P +A V + G E +L S G +Y+ G +S
Sbjct: 4272 LPEGRARNHNRPQQI--PVLAGVVIEDVAVGAEHTLALASTG----DVYAWGSNS 4320
Score = 236 (88.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 73/264 (27%), Positives = 124/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL + GEVF+WG +G+LG ++D++ + P++++ L VVQ G+ H V+T
Sbjct: 4094 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQGEEVVQMSCGFKHSAVVT 4151
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
S G++FT+G +G+LGL + K +P+RV L + Q G +
Sbjct: 4152 SD------------GKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLN 4197
Query: 126 HCLVLTSSGVVTCTHKEN-----GCG-----SDPSQ-----GVQSNLVQDSHTTITSLNS 170
H L +++ G + + G G S P + G+ V +L
Sbjct: 4198 HTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4257
Query: 171 PGELYTWGNNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YT+G + +G+ +PQ++ L + I +A GA H+ L+ S +Y
Sbjct: 4258 DGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA-STGDVY 4314
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLI 252
A+G S QL + H + P L+
Sbjct: 4315 AWGSNSEGQLGLGHTNHVREPTLV 4338
Score = 197 (74.4 bits), Expect = 5.4e-09, Sum P(4) = 5.4e-09
Identities = 75/267 (28%), Positives = 120/267 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
H+LA GEVF+WG +G+LG + +Q PK ++G L VV AGY H
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRH---- 522
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
S A+ + GE++TWG G+LG D S++IP VK +++V V + +
Sbjct: 523 --------SAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEVSCGSSH 572
Query: 125 SHCL-----VLTSSG----VVTCTHKENGCGSDPS-----QGVQSNLVQDSHTTITSLNS 170
+ L + S G V H + P QG+ V + +L S
Sbjct: 573 TIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 632
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G++Y WG +G +S T +P+ +E L I I+ G +H ++ + +YA
Sbjct: 633 TGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMD-NEVYA 689
Query: 231 FG---IGSAVQLDSPKSVHKTPQLIHG 254
+G +G Q +S + K P+ + G
Sbjct: 690 WGNNSMGQCGQGNSTGPITK-PKKVSG 715
Score = 196 (74.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 71/259 (27%), Positives = 115/259 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + G++FT+G +G+LGL + K +P+RV L + Q G +H L
Sbjct: 4143 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKK--LPERVTALEGYQIGQVACGLNHTL 4200
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+++ D V+ +G +G+LGL ++ KS P++V L + + +
Sbjct: 4201 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4247
Query: 123 GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GV--QSNLVQDSHTTIT 166
G + LT G V ++ G + P Q GV + V HT
Sbjct: 4248 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTL-- 4305
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L S G++Y WG+N GQ+G+ ++N V +P V L I I+ G HS +
Sbjct: 4306 ALASTGDVYAWGSNSEGQLGLGHTNH-VREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4364
Query: 227 RLYAFGIGSAVQLDSPKSV 245
A G+ +QL P +V
Sbjct: 4365 PPRAPGVSVPLQLGLPDAV 4383
Score = 192 (72.6 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 79/265 (29%), Positives = 123/265 (46%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
WH L C +V+ WG HGQL E+ ++ +P + V C +C +
Sbjct: 3992 WH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQQV-ICG--QNCTFV 4042
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
G LA CGE ++G GQ G S D ++ ++G +V +C
Sbjct: 4043 IQANGT--VLA---CGEG-SYG--RLGQ-G-NSDDLHVLTVISALQGFVVTQLVTSCGSD 4092
Query: 125 SHCLVLTSSGVVTC----THKENGCG-SD----PSQ--GVQSN-LVQDS----HTTITSL 168
H + LT SG V + + G G SD P Q +Q +VQ S H+ + +
Sbjct: 4093 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT- 4151
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
S G+L+T+GN +YG++G+ N++ P+RV +L I +ACG NH+ +S S +
Sbjct: 4152 -SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV 4209
Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLI 252
+AFG G +L S K+ PQ +
Sbjct: 4210 WAFGDGDYGKLGLGNSTAKSSPQKV 4234
Score = 191 (72.3 bits), Expect = 2.2e-08, Sum P(4) = 2.2e-08
Identities = 84/310 (27%), Positives = 145/310 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVSVVQACAGYSH 60
G + + ++ G V G ++G+LGL D +QS K++ + S+ V + G
Sbjct: 411 GQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKKVSSSKG--- 465
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
+ G H+LA GEVF+WG +G+LG + +Q PK ++G L VV
Sbjct: 466 ------SDG--HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVC 515
Query: 120 ACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQD-----------SHTT 164
AGY H +T G + + + G G S+ + + LV+D SHT
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPT-LVKDISNVGEVSCGSSHTI 574
Query: 165 ITSLNSPGELYTW---GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
+L+ G W G + G++G ++N V KP+ VE+L + I + G+ S L
Sbjct: 575 --ALSKDGRT-VWSFGGGDNVGKLGHGDTNR-VYKPKVVEALQGMFIRKVCAGSQSSLAL 630
Query: 222 SKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVV-K 280
+ S ++YA+G G+ + S ++ P+LI V ++ G+ SH V+
Sbjct: 631 T-STGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGD----SHVWLFVMDN 685
Query: 281 KIYSGGDHSI 290
++Y+ G++S+
Sbjct: 686 EVYAWGNNSM 695
Score = 165 (63.1 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 80/325 (24%), Positives = 139/325 (42%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
EV+ WG ++ QL +E +K PK + ++A G +C + ST G
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKILQ-PKMALSFSDAQTIEA--G-QYCTFVISTDG----- 422
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSS 133
++ CG+ G ++G+LGL ++ +S + S+ V + G H L T+
Sbjct: 423 SVRACGK----G--SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 134 GVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G V + T K P QG V + ++ GELYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV- 237
++G++G +SN+ P V+ + N + ++CG++H+ LSK +++FG G V
Sbjct: 537 EGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNVG 593
Query: 238 QLD--SPKSVHKTP--QLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
+L V+K + + G +I A + SL S G ++Y+ G + +
Sbjct: 594 KLGHGDTNRVYKPKVVEALQGMFIRKVCA--GSQSSLALTSTG----QVYAWGCGACLGC 647
Query: 294 TKSSDGVLSDDFRVLNPATQILDVN 318
S L AT+I+D++
Sbjct: 648 GSSEATALRPKLIEELAATRIVDIS 672
Score = 153 (58.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 67/247 (27%), Positives = 111/247 (44%)
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
TS WH L C +V+ WG HGQL E+ ++ +P + Q G
Sbjct: 3986 TSRPEDWH-LG-GKC-DVYLWGAGRHGQLA-EAG--RNVMVPAAAPSFSQAQ--QVICGQ 4037
Query: 125 SHCLVLTSSG-VVTC---THKENGCGSDPS----------QG-VQSNLV----QDSHTTI 165
+ V+ ++G V+ C ++ G G+ QG V + LV D H+
Sbjct: 4038 NCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM- 4096
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L GE+++WG+ +YG++G NS+ +P+++E+L + ++CG HS V++ S
Sbjct: 4097 -ALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVT-SD 4153
Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLI---HGPWIASPVAMTAGEDSLVSHSGGLVVKK 281
+L+ FG G +L S K P+ + G I VA VS G +V
Sbjct: 4154 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ-VACGLNHTLAVSADGSMVWA- 4211
Query: 282 IYSGGDH 288
+ GD+
Sbjct: 4212 -FGDGDY 4217
Score = 133 (51.9 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G+V+ WG LG S++ + PK ++ LA+ +V G SH
Sbjct: 623 GSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSH-- 677
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+W L + D EV+ WG ++ GQ G ++ PK+V GL +++ Q A
Sbjct: 678 -------VW--LFVMD-NEVYAWGNNSMGQCGQGNSTGPITK-PKKVSGLDGIAIQQISA 726
Query: 123 GYSHCLVLTS 132
G SH L T+
Sbjct: 727 GTSHSLAWTA 736
Score = 67 (28.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 725 YEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
Y R ++ ++ M F +G L G+AI +++ ++K++ P+ L+DL
Sbjct: 4560 YNRDRFLFNPSACLDEHLMQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDL 4619
Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
+++ ++L IL +ED GIT +++ ++ D F
Sbjct: 4620 EEVDLLYVQTLNSILH-----IEDS-GITEESFHEMIPLDSF 4655
Score = 50 (22.7 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VK GE A+DAGGV + + + +E+
Sbjct: 4514 KVKLVGEGADDAGGVFDDTITEMCQEL 4540
Score = 45 (20.9 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 321 RLKECEREVEQLKSDETLDQDLLLYLETVFLSP 353
++KE E+E++ K E ++D L ++ V P
Sbjct: 2006 QIKEKEQEIKSQKQGELEEEDENLPIQEVSFDP 2038
Score = 39 (18.8 bits), Expect = 5.1e-12, Sum P(4) = 5.1e-12
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 934 TRDFLCNYPFIFDA 947
+RD+LCN + F++
Sbjct: 1566 SRDWLCNSSYSFES 1579
Score = 37 (18.1 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 271 VSHSGGLVVKKIYSGGDHSI 290
VS G+ +++I +G HS+
Sbjct: 713 VSGLDGIAIQQISAGTSHSL 732
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 242 (90.2 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 74/241 (30%), Positives = 109/241 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH+ + G++FT+G T G LG S + ++ PK V+ L + V+ G H
Sbjct: 403 GAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTK--PKEVESLRRMKVISVSCGPWHTA 460
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+ T CG++FTWG G+LG AD K + +P V L ++
Sbjct: 461 AIVETANDRKFYNAKSCGKLFTWGDGDKGRLG--HADSKRKLVPTCVTELIDHDFIKVSC 518
Query: 123 GYSHCLVLTSSGVV----TCTHKENGC--GSDPSQGVQ-SNL----VQD----SHTTITS 167
G++ + L+ SG V + H + GC D S V NL V+D SH +
Sbjct: 519 GWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHH-VAV 577
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN--HSFVLSKSV 225
L S G +YTWG GQ+G+ + P VE L + + IACG N + L K +
Sbjct: 578 LTSFGNVYTWGKGMNGQLGLGDVRDR-NSPVLVEPLGDRLVESIACGLNLTAAICLHKEI 636
Query: 226 S 226
S
Sbjct: 637 S 637
Score = 163 (62.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 56/180 (31%), Positives = 90/180 (50%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQSIPKRVKGLASVSVVQ-A 120
V + + G H+ + GEVF WG G+LGL+ + D PKRV+ L V+V A
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDH---PKRVESLEDVAVRSVA 350
Query: 121 CAGYSHCLVLTSS-----GVVTCTHKENGCG------SDPSQG---VQSNLVQDSHTTIT 166
C+ + C V S G+ T +++G SD G V S HT I
Sbjct: 351 CSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIV 410
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+ S G+L+T+G+ +G +G + S +VTKP+ VESL + + ++CG H+ + ++ +
Sbjct: 411 T--SSGQLFTYGSGTFGVLG-HGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETAN 467
Score = 148 (57.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 76/281 (27%), Positives = 123/281 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
G H+ + GEVF WG G+LGL+ + D PKRV+ L V+V AC+ +
Sbjct: 300 GAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDH---PKRVESLEDVAVRSVACSDHQT 356
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWG--GDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
C A+ + GE++ WG G T Q G + +K + + G +V V
Sbjct: 357 C-------------AVTESGELYLWGIDGGTIEQSGSQFLTRKISDV---LGGSLTVLSV 400
Query: 119 QACAGYSHCLVLTSSGVVTC---THKENGCGSDPS----QGVQS----NLVQDS----HT 163
AC + +V +S + T T G GS S + V+S ++ S HT
Sbjct: 401 -ACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHT 459
Query: 164 T--ITSLN--------SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIAC 213
+ + N S G+L+TWG+ + G++G +S + P V L++ ++C
Sbjct: 460 AAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCVTELIDHDFIKVSC 518
Query: 214 GANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
G + LS S +Y G QL P++ K+ ++ G
Sbjct: 519 GWTLTVALSIS-GTVYTMGSSIHGQLGCPRAKDKSVNVVLG 558
Score = 42 (19.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 8/45 (17%), Positives = 27/45 (60%)
Query: 291 VTVTKSSDGVLSDDFRVLNPATQIL----DVNFERLKECEREVEQ 331
++ + S+ +L+++ L + L ++ E+++EC++E+++
Sbjct: 788 ISTSSESNKILTEEIERLKAVIKNLQRQCELGNEKMEECQQELDK 832
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 223 (83.6 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 66/262 (25%), Positives = 125/262 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LA+ GEV +WG + +GQLGL D + +P++++ + + AG H
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEH----- 183
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+ A+ + G+++ WG +G LGL D+ + +P+RV + G+
Sbjct: 184 -------TAAVTEDGDLYGWGWGRYGNLGL--GDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
H + ++ SG + + + G G + L S++ I+ +L S
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G+LY WG N++GQ+G+ N N P +V + + ++CG H+ +++ + ++A+
Sbjct: 295 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 352
Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
G G+ QL +SV + P++I
Sbjct: 353 GRGTNGQLGIGESVDRNFPKII 374
Score = 208 (78.3 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 70/251 (27%), Positives = 110/251 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+AL V +WG GQLG D + + P ++ L +V G H
Sbjct: 23 GASHSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTCGADHT- 79
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V S +G+ EV++WG G+LG ++ +P +K L + + Q
Sbjct: 80 VAYSQSGM----------EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIAC 127
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CG-SD------PS-----QGVQSNLVQDSHTTITSL 168
G SHCL +T G V + +NG G D P +G++ +V ++
Sbjct: 128 GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 187
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G+LY WG YG +G+ + + P+RV S ++++ACG H+ +S S L
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACGWRHTISVSYS-GAL 245
Query: 229 YAFGIGSAVQL 239
Y +G QL
Sbjct: 246 YTYGWSKYGQL 256
Score = 159 (61.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
VL + G HS+AL V +WG GQLG D + + P ++ L +V
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 123 GYSHCLVLTSSGVVTCT-------HKENGCGSD-----PSQ---GVQSNLVQ--DSHTTI 165
G H + + SG+ + +G SD P + G++ + DSH
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
++ GE+ +WG N+ GQ+G+ ++ ++ PQ++++ + I ++A GA H+ +++
Sbjct: 135 VTME--GEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGIRIKMVAAGAEHTAAVTED- 190
Query: 226 SRLYAFGIG 234
LY +G G
Sbjct: 191 GDLYGWGWG 199
Score = 132 (51.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 35/128 (27%), Positives = 64/128 (50%)
Query: 5 W-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W H+++++ G ++T+G +GQLG D + IP +++ L++ + Q G+ H +
Sbjct: 233 WRHTISVSYSGALYTYGWSKYGQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMA 290
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
LTS G+++ WG + GQ+G+ + Q P +V+ VVQ G
Sbjct: 291 LTSD------------GKLYGWGWNKFGQVGV--GNNLDQCSPVQVRFPDDQKVVQVSCG 336
Query: 124 YSHCLVLT 131
+ H L +T
Sbjct: 337 WRHTLAVT 344
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 1 MTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
++G W H++AL G+++ WG + GQ+G+ + Q P +V+ VVQ G+
Sbjct: 281 ISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQCSPVQVRFPDDQKVVQVSCGWR 338
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLA 113
H +LA+ + VF WG T+GQLG+ ES D+ + PK ++ L+
Sbjct: 339 H------------TLAVTERNNVFAWGRGTNGQLGIGESVDR---NFPKIIEALS 378
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 249 (92.7 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 79/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 1916 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 1972
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 1973 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 2021
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 2079
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 2080 AVTDSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2130
Score = 225 (84.3 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 69/233 (29%), Positives = 107/233 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G+++TWG +G+LG +D + Q PK V+ L V+ G
Sbjct: 2876 HSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG-------- 2925
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 2926 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 2981
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T
Sbjct: 2982 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 3041
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 3042 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3093
Score = 213 (80.0 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 77/266 (28%), Positives = 123/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH LT
Sbjct: 1867 HATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALT 1924
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 1925 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 1970
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 1971 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ S ++Y
Sbjct: 2031 KSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS-GQVY 2088
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 2089 AWGDNDHGQQGNGTTTVNRKPTLVQG 2114
Score = 209 (78.6 bits), Expect = 7.1e-10, Sum P(3) = 7.1e-10
Identities = 72/264 (27%), Positives = 122/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L + VV AG +H +T
Sbjct: 2824 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 2881
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G+++TWG +G+LG +D + Q PK V+ L V+ AC +G
Sbjct: 2882 AA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACGSG 2927
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 2928 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 2987
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ +Y
Sbjct: 2988 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED-GEVY 3045
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 3046 TWGDNDEGQLGDGTTNAIQRPRLV 3069
Score = 196 (74.1 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 74/258 (28%), Positives = 122/258 (47%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V++ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 1820 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 1868
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 1869 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 1926
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 1927 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 1986
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 1987 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 2044
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 2045 RLGHGSDVHVRKPQVVEG 2062
Score = 181 (68.8 bits), Expect = 5.2e-07, Sum P(4) = 5.2e-07
Identities = 73/240 (30%), Positives = 119/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G +S
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYS 1824
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 1825 -----CGEA------TNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 1872
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ +L S GELY
Sbjct: 1873 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSGELY 1930
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 1931 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1989
Score = 162 (62.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 62/234 (26%), Positives = 105/234 (44%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W +L+ G ++ WG + GQLG +E A K +P + LA++ VQ G
Sbjct: 2718 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFA 2773
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQAC 121
+T+ G+++ G G+LG+ + S S P ++ + V + V
Sbjct: 2774 VTAD------------GKLYATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVN 2819
Query: 122 AGYSHCLVLTSSG-VVTCTHKENG---------CGS----DPSQGVQSNLVQDSHTTITS 167
+G HCL L+S G V + E+G C + +G++ V
Sbjct: 2820 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 2879
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
+ + G+LYTWG YG++G ++S + KP+ VE+L + IACG+ + L
Sbjct: 2880 VTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTL 2932
Score = 147 (56.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G V+TWG + +LG +D + P+ V+GL +V G HCL
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 2079
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G+V+ WG + HGQ G + + P V+GL + +
Sbjct: 2080 AVT------------DSGQVYAWGDNDHGQQGNGTTTVNRK--PTLVQGLEGQKITRVAC 2125
Query: 123 GYSHCLVLTSSGVVT 137
G SH + T+ V T
Sbjct: 2126 GSSHSVAWTTVDVAT 2140
Score = 52 (23.4 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 2607 PIVRGGKQLLHSPFFKVLVALACDLELD 2634
Score = 48 (22.0 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 3241 KVKFVGESVDDCGGGYSESIAEICEEL 3267
Score = 45 (20.9 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
+M +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 3304 SMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 3361
Score = 43 (20.2 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + + + +L T SV L G+++SQ
Sbjct: 3116 PIIALRNRLLLLHHISELFCPC-----IPMFDLEGSLDETGLGPSVGFDTLRGILISQ 3168
Score = 40 (19.1 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +GL A
Sbjct: 1465 YKWGSVTHQSVGLVKA 1480
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 249 (92.7 bits), Expect = 6.2e-15, Sum P(3) = 6.2e-15
Identities = 79/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 1916 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 1972
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 1973 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 2021
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 2079
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 2080 AVTDSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2130
Score = 225 (84.3 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 69/233 (29%), Positives = 107/233 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G+++TWG +G+LG +D + Q PK V+ L V+ G
Sbjct: 2912 HSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG-------- 2961
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 2962 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 3017
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T
Sbjct: 3018 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 3077
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 3078 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3129
Score = 213 (80.0 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 77/266 (28%), Positives = 123/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH LT
Sbjct: 1867 HATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALT 1924
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 1925 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 1970
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 1971 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ S ++Y
Sbjct: 2031 KSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS-GQVY 2088
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 2089 AWGDNDHGQQGNGTTTVNRKPTLVQG 2114
Score = 209 (78.6 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 72/264 (27%), Positives = 122/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L + VV AG +H +T
Sbjct: 2860 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 2917
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G+++TWG +G+LG +D + Q PK V+ L V+ AC +G
Sbjct: 2918 AA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACGSG 2963
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 2964 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3023
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ +Y
Sbjct: 3024 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED-GEVY 3081
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 3082 TWGDNDEGQLGDGTTNAIQRPRLV 3105
Score = 196 (74.1 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 74/258 (28%), Positives = 122/258 (47%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V++ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 1820 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 1868
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 1869 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 1926
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 1927 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 1986
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 1987 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 2044
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 2045 RLGHGSDVHVRKPQVVEG 2062
Score = 181 (68.8 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 73/240 (30%), Positives = 119/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G +S
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYS 1824
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 1825 -----CGEA------TNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 1872
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ +L S GELY
Sbjct: 1873 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSGELY 1930
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 1931 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1989
Score = 162 (62.1 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 62/234 (26%), Positives = 105/234 (44%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W +L+ G ++ WG + GQLG +E A K +P + LA++ VQ G
Sbjct: 2754 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFA 2809
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQAC 121
+T+ G+++ G G+LG+ + S S P ++ + V + V
Sbjct: 2810 VTAD------------GKLYATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVN 2855
Query: 122 AGYSHCLVLTSSG-VVTCTHKENG---------CGS----DPSQGVQSNLVQDSHTTITS 167
+G HCL L+S G V + E+G C + +G++ V
Sbjct: 2856 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 2915
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
+ + G+LYTWG YG++G ++S + KP+ VE+L + IACG+ + L
Sbjct: 2916 VTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTL 2968
Score = 147 (56.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G V+TWG + +LG +D + P+ V+GL +V G HCL
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 2079
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G+V+ WG + HGQ G + + P V+GL + +
Sbjct: 2080 AVT------------DSGQVYAWGDNDHGQQGNGTTTVNRK--PTLVQGLEGQKITRVAC 2125
Query: 123 GYSHCLVLTSSGVVT 137
G SH + T+ V T
Sbjct: 2126 GSSHSVAWTTVDVAT 2140
Score = 52 (23.4 bits), Expect = 6.2e-15, Sum P(3) = 6.2e-15
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 2643 PIVRGGKQLLHSPFFKVLVALACDLELD 2670
Score = 48 (22.0 bits), Expect = 6.2e-15, Sum P(3) = 6.2e-15
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 3277 KVKFVGESVDDCGGGYSESIAEICEEL 3303
Score = 45 (20.9 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
+M +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 3340 SMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 3397
Score = 43 (20.2 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + + + +L T SV L G+++SQ
Sbjct: 3152 PIIALRNRLLLLHHISELFCPC-----IPMFDLEGSLDETGLGPSVGFDTLRGILISQ 3204
Score = 40 (19.1 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +GL A
Sbjct: 1465 YKWGSVTHQSVGLVKA 1480
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 158 (60.7 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L++ G+VF+WG HGQLG S + + + P+ ++ L + V + AG
Sbjct: 103 GAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPE--PRLLEALQGLPVAEVAAG----- 155
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD--KKSQSIPKRVKGL 112
G WHS+ +++ G+++ WG + GQL L S + +++IP+ GL
Sbjct: 156 ------G-WHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGL 200
Score = 109 (43.4 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSF 219
HT + + GELYTWG +YGQ+G + T++ +P RVE V+ L + ++CG +++
Sbjct: 248 HTAVVT--GTGELYTWGWGKYGQLG-HKDTTSLDRPCRVEYFVDKQLQVRAVSCGPWNTY 304
Query: 220 V 220
V
Sbjct: 305 V 305
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 249 (92.7 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 79/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3107
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3108 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3156
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 3157 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 3214
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3215 AVTDSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3265
Score = 225 (84.3 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 69/233 (29%), Positives = 107/233 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G+++TWG +G+LG +D + Q PK V+ L V+ G
Sbjct: 4047 HSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG-------- 4096
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4097 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 4152
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T
Sbjct: 4153 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 4212
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 4213 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4264
Score = 213 (80.0 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 77/266 (28%), Positives = 123/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH LT
Sbjct: 3002 HATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3059
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3060 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 3105
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3106 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ S ++Y
Sbjct: 3166 KSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS-GQVY 3223
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3224 AWGDNDHGQQGNGTTTVNRKPTLVQG 3249
Score = 209 (78.6 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 72/264 (27%), Positives = 122/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L + VV AG +H +T
Sbjct: 3995 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4052
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G+++TWG +G+LG +D + Q PK V+ L V+ AC +G
Sbjct: 4053 AA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACGSG 4098
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 4099 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4158
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ +Y
Sbjct: 4159 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED-GEVY 4216
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 4217 TWGDNDEGQLGDGTTNAIQRPRLV 4240
Score = 196 (74.1 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 74/258 (28%), Positives = 122/258 (47%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V++ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 2955 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3003
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 3004 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3061
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 3062 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3121
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3122 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 3179
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3180 RLGHGSDVHVRKPQVVEG 3197
Score = 193 (73.0 bits), Expect = 5.0e-08, Sum P(4) = 5.0e-08
Identities = 66/234 (28%), Positives = 108/234 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ G
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 557
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + V++
Sbjct: 558 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 610
Query: 123 GYSHCLVLTSSGVVTCTHK-EN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V K +N G G++ P +G+Q V D T +L
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 670
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L I IACG SF S
Sbjct: 671 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 723
Score = 181 (68.8 bits), Expect = 8.0e-07, Sum P(4) = 8.0e-07
Identities = 74/268 (27%), Positives = 129/268 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
H LAL GEV++WG G+LG ++P + K +++ S QA G H V+
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQA--G-KH--VV 500
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-A 122
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ AC +
Sbjct: 501 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACGS 558
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QD---------SHTTITS 167
G + L +T +G V + + G G S G ++ L+ QD S +I +
Sbjct: 559 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI-A 617
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L G++Y+WG + ++G + + V P+ +E L + +A G+ H L++ S
Sbjct: 618 LTKDGQVYSWGKGDNQRLG-HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTED-SE 675
Query: 228 LYAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
++++G Q D+ + P + G
Sbjct: 676 VHSWGSNDQCQHFDTLRVTKPEPTALPG 703
Score = 181 (68.8 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 73/240 (30%), Positives = 119/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G +S
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYS 2959
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 2960 -----CGEA------TNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 3007
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ +L S GELY
Sbjct: 3008 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSGELY 3065
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 3066 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3124
Score = 164 (62.8 bits), Expect = 3.9e-05, Sum P(4) = 3.9e-05
Identities = 65/236 (27%), Positives = 110/236 (46%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
P+ V+GLAS ++V+ A H + G H LAL GEV++WG G+LG D
Sbjct: 430 PQLVQGLASRNIVKIAA---H------SDG-HHYLALAATGEVYSWGCGDGGRLG--HGD 477
Query: 100 KKSQSIPKRVKGL----ASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ 151
PK + A VV G ++ +T+ G + + N G GS +
Sbjct: 478 TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 537
Query: 152 -------GVQSNLVQD----SHTTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR 199
G++ V D S T ++ G++++WG+ +YG++G S+ T P+
Sbjct: 538 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-PKL 596
Query: 200 VESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
+E L +L + + CG+ S L+K ++Y++G G +L H + P+L+ G
Sbjct: 597 IEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 651
Score = 162 (62.1 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 62/234 (26%), Positives = 105/234 (44%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W +L+ G ++ WG + GQLG +E A K +P + LA++ VQ G
Sbjct: 3889 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFA 3944
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQAC 121
+T+ G+++ G G+LG+ + S S P ++ + V + V
Sbjct: 3945 VTAD------------GKLYATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVN 3990
Query: 122 AGYSHCLVLTSSG-VVTCTHKENG---------CGS----DPSQGVQSNLVQDSHTTITS 167
+G HCL L+S G V + E+G C + +G++ V
Sbjct: 3991 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4050
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
+ + G+LYTWG YG++G ++S + KP+ VE+L + IACG+ + L
Sbjct: 4051 VTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTL 4103
Score = 147 (56.8 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G V+TWG + +LG +D + P+ V+GL +V G HCL
Sbjct: 3157 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3214
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G+V+ WG + HGQ G + + P V+GL + +
Sbjct: 3215 AVT------------DSGQVYAWGDNDHGQQGNGTTTVNRK--PTLVQGLEGQKITRVAC 3260
Query: 123 GYSHCLVLTSSGVVT 137
G SH + T+ V T
Sbjct: 3261 GSSHSVAWTTVDVAT 3275
Score = 52 (23.4 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3778 PIVRGGKQLLHSPFFKVLVALACDLELD 3805
Score = 48 (22.0 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4412 KVKFVGESVDDCGGGYSESIAEICEEL 4438
Score = 45 (20.9 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
+M +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4476 SMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 4533
Score = 43 (20.2 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + + + +L T SV L G+++SQ
Sbjct: 4287 PIIALRNRLLLLHHISELFCPC-----IPMFDLEGSLDETGLGPSVGFDTLRGILISQ 4339
Score = 43 (20.2 bits), Expect = 5.0e-08, Sum P(4) = 5.0e-08
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 287 DHSIVTVTKSSDG-VLSDDF 305
DHS V VT+ SD +SD++
Sbjct: 2448 DHSDVQVTEFSDAETVSDEY 2467
Score = 40 (19.1 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +GL A
Sbjct: 2600 YKWGSVTHQSVGLVKA 2615
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 249 (92.7 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 79/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3212
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 3270
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321
Score = 226 (84.6 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 70/233 (30%), Positives = 107/233 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G+++TWG +G+LG +D + Q PK V+ L VV G
Sbjct: 4102 HSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG-------- 4151
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4152 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 4207
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T
Sbjct: 4208 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 4267
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 4268 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319
Score = 213 (80.0 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 77/266 (28%), Positives = 123/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH LT
Sbjct: 3058 HATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3116 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 3161
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3162 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ S ++Y
Sbjct: 3222 KSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS-GQVY 3279
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3280 AWGDNDHGQQGNGTTTVNRKPTLVQG 3305
Score = 210 (79.0 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 73/264 (27%), Positives = 122/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L + VV AG +H +T
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G+++TWG +G+LG +D + Q PK V+ L VV AC +G
Sbjct: 4108 AA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ +Y
Sbjct: 4214 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED-GEVY 4271
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 4272 TWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 195 (73.7 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 74/258 (28%), Positives = 121/258 (46%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3177
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3178 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 3235
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG 3253
Score = 194 (73.4 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 67/234 (28%), Positives = 108/234 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ G
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + VV+
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664
Query: 123 GYSHCLVLTSSGVVTCTHK-EN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V K +N G G++ P +G+Q V D T +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L I IACG SF S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 181 (68.8 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 74/268 (27%), Positives = 129/268 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
H LAL GEV++WG G+LG ++P + K +++ S QA G H V+
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQA--G-KH--VV 554
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-A 122
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ AC +
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACGS 612
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QD---------SHTTITS 167
G + L +T +G V + + G G S G ++ L+ QD S +I +
Sbjct: 613 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI-A 671
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L G++Y+WG + ++G + + V P+ +E L + +A G+ H L++ S
Sbjct: 672 LTKDGQVYSWGKGDNQRLG-HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTED-SE 729
Query: 228 LYAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
++++G Q D+ + P + G
Sbjct: 730 VHSWGSNDQCQHFDTLRVTKPEPAALPG 757
Score = 178 (67.7 bits), Expect = 6.3e-06, Sum P(4) = 6.3e-06
Identities = 72/240 (30%), Positives = 119/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G ++
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYA 3015
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 3016 -----CGEA------TNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 3063
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ +L S GELY
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSGELY 3121
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 3122 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 165 (63.1 bits), Expect = 4.0e-05, Sum P(4) = 4.0e-05
Identities = 65/236 (27%), Positives = 110/236 (46%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
P+ V+GLAS ++V+ A H + G H LAL GEV++WG G+LG D
Sbjct: 484 PQLVQGLASRNIVKIAA---H------SDG-HHYLALAATGEVYSWGCGDGGRLG--HGD 531
Query: 100 KKSQSIPKRVKGL----ASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ 151
PK + A VV G ++ +T+ G + + N G GS +
Sbjct: 532 TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 152 -------GVQSNLVQD----SHTTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR 199
G++ V D S T ++ G++++WG+ +YG++G S+ T P+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-PKL 650
Query: 200 VESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
+E L +L + + CG+ S L+K ++Y++G G +L H + P+L+ G
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 705
Score = 163 (62.4 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 62/234 (26%), Positives = 105/234 (44%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W +L+ G ++ WG + GQLG +E A K +P + LA++ VQ G
Sbjct: 3944 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFA 3999
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQAC 121
+T+ G+++ G G+LG+ + S S P ++ + V + V
Sbjct: 4000 VTAD------------GKLYATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVN 4045
Query: 122 AGYSHCLVLTSSG-VVTCTHKENG---------CGS----DPSQGVQSNLVQDSHTTITS 167
+G HCL L+S G V + E+G C + +G++ V
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
+ + G+LYTWG YG++G ++S + KP+ VE+L + IACG+ + L
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTL 4158
Score = 147 (56.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G V+TWG + +LG +D + P+ V+GL +V G HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G+V+ WG + HGQ G + + P V+GL + +
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQGNGTTTVNRK--PTLVQGLEGQKITRVAC 3316
Query: 123 GYSHCLVLTSSGVVT 137
G SH + T+ V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331
Score = 52 (23.4 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3833 PIVRGGKQLLHSPFFKVLVALACDLELD 3860
Score = 48 (22.0 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4467 KVKFVGESVDDCGGGYSESIAEICEEL 4493
Score = 45 (20.9 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
+M +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4531 SMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 4588
Score = 43 (20.2 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + + + +L T SV L G+++SQ
Sbjct: 4342 PIIALRNRLLLLHHLSELFCPC-----IPMFDLEGSLDETGLGPSVGFDTLRGILISQ 4394
Score = 42 (19.8 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 287 DHSIVTVTKSSDG-VLSDDF 305
DHS + VT+ SD +SD++
Sbjct: 2504 DHSDIQVTELSDADTVSDEY 2523
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +G+ A
Sbjct: 2656 YKWGSVTHQSVGVVKA 2671
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 249 (92.7 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 79/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3213
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 3271
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322
Score = 225 (84.3 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 69/233 (29%), Positives = 107/233 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G+++TWG +G+LG +D + Q PK V+ L V+ G
Sbjct: 4104 HSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG-------- 4153
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4154 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 4209
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T
Sbjct: 4210 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 4269
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 4270 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321
Score = 213 (80.0 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 77/266 (28%), Positives = 123/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH LT
Sbjct: 3059 HATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3117 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 3162
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3163 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ S ++Y
Sbjct: 3223 KSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS-GQVY 3280
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3281 AWGDNDHGQQGNGTTTVNRKPTLVQG 3306
Score = 209 (78.6 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 72/264 (27%), Positives = 122/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L + VV AG +H +T
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4109
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G+++TWG +G+LG +D + Q PK V+ L V+ AC +G
Sbjct: 4110 AA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACGSG 4155
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 4156 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ +Y
Sbjct: 4216 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED-GEVY 4273
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 4274 TWGDNDEGQLGDGTTNAIQRPRLV 4297
Score = 196 (74.1 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 74/258 (28%), Positives = 122/258 (47%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V++ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 3012 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3178
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3179 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 3236
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG 3254
Score = 194 (73.4 bits), Expect = 2.1e-08, Sum P(4) = 2.1e-08
Identities = 66/234 (28%), Positives = 109/234 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ G
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + V++
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 665
Query: 123 GYSHCLVLTSSGVVTCTHK-EN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V K +N G G++ P +G+Q V D T +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L + I IACG SF S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778
Score = 181 (68.8 bits), Expect = 4.3e-07, Sum P(4) = 4.3e-07
Identities = 74/268 (27%), Positives = 129/268 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
H LAL GEV++WG G+LG ++P + K +++ S QA G H V+
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQA--G-KH--VV 555
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-A 122
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ AC +
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACGS 613
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QD---------SHTTITS 167
G + L +T +G V + + G G S G ++ L+ QD S +I +
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI-A 672
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L G++Y+WG + ++G + + V P+ +E L + +A G+ H L++ S
Sbjct: 673 LTKDGQVYSWGKGDNQRLG-HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTED-SE 730
Query: 228 LYAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
++++G Q D+ + P + G
Sbjct: 731 VHSWGSNDQCQHFDTLRVTKPEPTALPG 758
Score = 181 (68.8 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 73/240 (30%), Positives = 119/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G +S
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYS 3016
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 3017 -----CGEA------TNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 3064
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ +L S GELY
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSGELY 3122
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 3123 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 164 (62.8 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 65/236 (27%), Positives = 110/236 (46%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
P+ V+GLAS ++V+ A H + G H LAL GEV++WG G+LG D
Sbjct: 485 PQLVQGLASRNIVKIAA---H------SDG-HHYLALAATGEVYSWGCGDGGRLG--HGD 532
Query: 100 KKSQSIPKRVKGL----ASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ 151
PK + A VV G ++ +T+ G + + N G GS +
Sbjct: 533 TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 152 -------GVQSNLVQD----SHTTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR 199
G++ V D S T ++ G++++WG+ +YG++G S+ T P+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-PKL 651
Query: 200 VESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
+E L +L + + CG+ S L+K ++Y++G G +L H + P+L+ G
Sbjct: 652 IEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 706
Score = 162 (62.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 62/234 (26%), Positives = 105/234 (44%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W +L+ G ++ WG + GQLG +E A K +P + LA++ VQ G
Sbjct: 3946 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFA 4001
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQAC 121
+T+ G+++ G G+LG+ + S S P ++ + V + V
Sbjct: 4002 VTAD------------GKLYATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVN 4047
Query: 122 AGYSHCLVLTSSG-VVTCTHKENG---------CGS----DPSQGVQSNLVQDSHTTITS 167
+G HCL L+S G V + E+G C + +G++ V
Sbjct: 4048 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4107
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
+ + G+LYTWG YG++G ++S + KP+ VE+L + IACG+ + L
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQTL 4160
Score = 147 (56.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G V+TWG + +LG +D + P+ V+GL +V G HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G+V+ WG + HGQ G + + P V+GL + +
Sbjct: 3272 AVT------------DSGQVYAWGDNDHGQQGNGTTTVNRK--PTLVQGLEGQKITRVAC 3317
Query: 123 GYSHCLVLTSSGVVT 137
G SH + T+ V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332
Score = 52 (23.4 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3835 PIVRGGKQLLHSPFFKVLVALACDLELD 3862
Score = 48 (22.0 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4469 KVKFVGESVDDCGGGYSESIAEICEEL 4495
Score = 46 (21.3 bits), Expect = 2.1e-08, Sum P(4) = 2.1e-08
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 287 DHSIVTVTKSSDG-VLSDDF 305
DHS V VT+ SD LSD++
Sbjct: 2505 DHSDVQVTEFSDAETLSDEY 2524
Score = 45 (20.9 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
+M +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4533 SMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 4590
Score = 43 (20.2 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + + + +L T SV L G+++SQ
Sbjct: 4344 PIIALRNRLLLLHHISELFCPC-----IPMFDLEGSLDETGLGPSVGFDTLRGILISQ 4396
Score = 40 (19.1 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +GL A
Sbjct: 2657 YKWGSVTHQSVGLVKA 2672
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 168 (64.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 57/156 (36%), Positives = 78/156 (50%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQ-ACAGY 58
G +H+ AL+D GEV+TWG + GQLG L+S DK + IP+RV GL VS+ + AC G
Sbjct: 235 GEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDK--ELIPRRVVGLDGVSMKEVACGGV 292
Query: 59 SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLE-------SADKKSQSIPKRVKG 111
C +L+L G ++ WGG GQLGL S S+ + + V
Sbjct: 293 HTC-----------ALSLE--GALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPV 339
Query: 112 LASVSVVQACA-GYSHCLVLTSSGVVTCTHKENGCG 146
L + V+ A G+SH LV G + C N G
Sbjct: 340 LVIPTDVRLVACGHSHTLVYMREGRI-CGWGYNSYG 374
Score = 157 (60.3 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 46/137 (33%), Positives = 72/137 (52%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H +AL++ G + WG + GQLG + Q+ P+ + A + +A
Sbjct: 174 GTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQA-PRVINAYAKF-LDEAPELVK--- 228
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQ 119
++ + G +H+ AL+D GEV+TWG + GQLG L+S DK + IP+RV GL VS+ +
Sbjct: 229 IMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDK--ELIPRRVVGLDGVSMKE 286
Query: 120 ACAGYSHCLVLTSSGVV 136
G H L+ G +
Sbjct: 287 VACGGVHTCALSLEGAL 303
Score = 116 (45.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMG-IN-NSNTTVTKPQRVESLVNLPIALIACGANHSF 219
HT +L+ GE+YTWG GQ+G ++ S P+RV L + + +ACG H+
Sbjct: 238 HTA--ALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTC 295
Query: 220 VLSKSVSRLYAFGIGSAVQLD-SPKS 244
LS LYA+G G A QL P+S
Sbjct: 296 ALSLE-GALYAWGGGQAGQLGLGPQS 320
Score = 115 (45.5 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S+++ ++ WG + GQ G +K + IPK++ + C ++ L
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLR-IPKQLP-----PELFGCPAGANSRWLDI 66
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGYS 125
+ G H+ A+ G +F WG + +GQLG + + PK+VK L S V +C +
Sbjct: 67 SCGREHTAAVASDGSLFAWGANEYGQLG--DGTEVGRKHPKKVKQLQSEFVKFVSCGAFC 124
Query: 126 HCLVLT---SSGVVTCTHK----ENGCGSDPS--QGV---QSNLVQDSHTT--ITSLNSP 171
+ + G ++ + +N + P G + + Q S T + +L+
Sbjct: 125 TAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEE 184
Query: 172 GELYTWGNNEYGQMG 186
G L WG NE GQ+G
Sbjct: 185 GLLQAWGYNEQGQLG 199
Score = 112 (44.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 52/190 (27%), Positives = 83/190 (43%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGIN-NSNTTVTKPQRVESLV-NLPIA-------LIA 212
HT SL G LY WG + GQ+G+ S + E L+ N+P+ L+A
Sbjct: 293 HTCALSLE--GALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVA 350
Query: 213 CGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVS 272
CG +H+ V + R+ +G S Q + KS + W SPV G+ ++
Sbjct: 351 CGHSHTLVYMRE-GRICGWGYNSYGQAANEKSSYA--------WYPSPVDWCVGQVRKLA 401
Query: 273 HSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKEC-EREVEQ 331
GG +S ++ + + L+D + N A++I DV F E R E+
Sbjct: 402 AGGG------HSAVLTDAFSLKELCEFQLADSVNLSN-ASEIQDVAFRMGSEALARLCER 454
Query: 332 LKSDETLDQD 341
L+ ++ LD D
Sbjct: 455 LR-EQLLDGD 463
Score = 82 (33.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 25/87 (28%), Positives = 38/87 (43%)
Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
SHT + G + WG N YGQ N ++ P V+ V + +A G HS V
Sbjct: 354 SHTLVYMRE--GRICGWGYNSYGQAA-NEKSSYAWYPSPVDWCVG-QVRKLAAGGGHSAV 409
Query: 221 LSK--SVSRLYAFGIGSAVQLDSPKSV 245
L+ S+ L F + +V L + +
Sbjct: 410 LTDAFSLKELCEFQLADSVNLSNASEI 436
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 215 (80.7 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 78/295 (26%), Positives = 135/295 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HS A+ GE++ WG ++ GQLGL + +P +V+ L +++ Q+ A
Sbjct: 142 GYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITI-QSVA------ 194
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL--ESA-----DKKSQSIPKRVKGLASV 115
G HS+A+ D GEV +WGG G+LG +S+ S+ P+ +K L +
Sbjct: 195 -----LGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGI 249
Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKEN----GCG-----SDPSQGVQSNLVQDS----- 161
V AG H +G +++ G G + PS + ++
Sbjct: 250 KVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGY 309
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANHSFV 220
HT + + GELYTWG+NE G +G +++ + + P RVE + ++ ++CG H+
Sbjct: 310 HTCVVTRG--GELYTWGSNENGCLGTDSTYVSHS-PVRVEGPFLESTVSQVSCGWKHTAA 366
Query: 221 LSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWI--ASPVAMTAGEDSLVSH 273
+S + ++ +G G + S QL HG + A P + G++ H
Sbjct: 367 ISDN--NVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVH 419
Score = 143 (55.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 47/154 (30%), Positives = 72/154 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLVL 64
H+L L + VF G + GQLG+ +D KS ++ P V GL ++ AGY
Sbjct: 93 HTLFLTETRRVFATGLNDCGQLGV--SDVKSHAMDPLEVSGLDK-DILHISAGY------ 143
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
+HS A+ GE++ WG ++ GQLGL + +P +V+ L +++ G
Sbjct: 144 ------YHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGS 197
Query: 125 SHCLVLTSSGVVTCTHKENGCGSDP-SQGVQSNL 157
H + +T G V G GS G QS+L
Sbjct: 198 EHSVAVTDGGEVLSW---GGGGSGRLGHGHQSSL 228
Score = 130 (50.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 58/195 (29%), Positives = 87/195 (44%)
Query: 11 NDCGEVFT--WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
++ G+ F WG +G+LGL + D SQ P L+ S+ G +H L LT T
Sbjct: 44 SESGKRFAAMWGSGDYGRLGLGNLD--SQWTPAVCSALSDHSITAVACGGAHTLFLTETR 101
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHC 127
++ + LNDCG QLG+ +D KS ++ P V GL ++ AGY H
Sbjct: 102 RVF-ATGLNDCG-----------QLGV--SDVKSHAMDPLEVSGLDK-DILHISAGYYHS 146
Query: 128 LVLTSSGVVTCTHKEN----GCGSDPSQGVQ-SNLVQDSH-TTITS--LNSP-------- 171
+T G + K + G G ++ V+ V+ H TI S L S
Sbjct: 147 AAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDG 206
Query: 172 GELYTWGNNEYGQMG 186
GE+ +WG G++G
Sbjct: 207 GEVLSWGGGGSGRLG 221
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 220 (82.5 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 66/225 (29%), Positives = 101/225 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH+ + G++FT+G T G LG D+ S +IP+ V+ L ++A G H
Sbjct: 414 GPWHTAFVTSEGKLFTFGDGTFGALG--HGDRISTNIPREVEALNGCRTIKAACGVWHSA 471
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+ S G G++FTWG G+LG D + + IP V L + S Q
Sbjct: 472 AVVSVFG-----EATSSGKLFTWGDGDDGRLG--HGDIECRLIPSCVTELDTTSFQQVAC 524
Query: 123 GYSHCLVLTSSGVVTC------THKENGCGSDPSQGVQSNLVQD---SHTTITSLNSPGE 173
G S + L+ SG V +H S G+ + VQ+ I LNS E
Sbjct: 525 GQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAE 584
Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
+YTWG GQ+G ++ P V++L + + CG+N++
Sbjct: 585 VYTWGKGSNGQLGHGDTEYRCM-PTLVKALKGKQVRKVVCGSNYT 628
Score = 170 (64.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 77/268 (28%), Positives = 119/268 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
G +H+ A+ G+++ WG H G LGL S S P R+ G V+A +
Sbjct: 359 GEFHTCAVTASGDLYAWGDGDHNAGLLGLGSG--ASHWKPVRILGQMEGIYVKAIS---- 412
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
C G WH+ + G++FT+G T G LG D+ S +IP+ V+ L ++A
Sbjct: 413 C-------GPWHTAFVTSEGKLFTFGDGTFGALG--HGDRISTNIPREVEALNGCRTIKA 463
Query: 121 CAGYSHCLVLTSS-GVVTCTHK--ENGCGSDPSQG---VQSNLVQDSHTTI--TSLNSP- 171
G H + S G T + K G G D G ++ L+ T + TS
Sbjct: 464 ACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVA 523
Query: 172 -GELYTWGNNEYGQ---MGINN-SNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSV 225
G+ T + GQ MG + S+ V P +E L + +ACG +H VL+ S
Sbjct: 524 CGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLN-SK 582
Query: 226 SRLYAFGIGSAVQLDSPKSVHKT-PQLI 252
+ +Y +G GS QL + ++ P L+
Sbjct: 583 AEVYTWGKGSNGQLGHGDTEYRCMPTLV 610
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 249 (92.7 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 79/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3028 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3084
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3085 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3133
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 3134 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 3191
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3192 AVTDAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3242
Score = 228 (85.3 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 70/233 (30%), Positives = 108/233 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G+++TWG +G+LG +D + Q PK V+ L VV G
Sbjct: 4025 HSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG-------- 4074
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4075 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 4130
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T +
Sbjct: 4131 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSED 4190
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 4191 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4242
Score = 210 (79.0 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 76/266 (28%), Positives = 123/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH LT
Sbjct: 2979 HATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3036
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3037 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 3082
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3083 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3142
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ + ++Y
Sbjct: 3143 KSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA-GQVY 3200
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3201 AWGDNDHGQQGNGTTTVNRKPTLVQG 3226
Score = 210 (79.0 bits), Expect = 2.2e-08, Sum P(4) = 2.2e-08
Identities = 74/264 (28%), Positives = 121/264 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L VV AG +H +T
Sbjct: 3973 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4030
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G+++TWG +G+LG +D + Q PK V+ L VV AC +G
Sbjct: 4031 AA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACGSG 4076
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 4077 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4136
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H S+ +Y
Sbjct: 4137 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSED-GEVY 4194
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 4195 TWGDNDEGQLGDGTTNAIQRPRLV 4218
Score = 195 (73.7 bits), Expect = 8.7e-07, Sum P(5) = 8.7e-07
Identities = 74/258 (28%), Positives = 121/258 (46%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 2932 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 2980
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 2981 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3038
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 3039 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3098
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3099 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 3156
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3157 RLGHGSDVHVRKPQVVEG 3174
Score = 194 (73.4 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 67/234 (28%), Positives = 108/234 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ G
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 522
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + VV+
Sbjct: 523 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 575
Query: 123 GYSHCLVLTSSGVVTCTHK-EN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V K +N G G++ P +G+Q V D T +L
Sbjct: 576 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 635
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L I IACG SF S
Sbjct: 636 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 688
Score = 181 (68.8 bits), Expect = 2.1e-05, Sum P(5) = 2.1e-05
Identities = 72/267 (26%), Positives = 126/267 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
H LAL GEV++WG G+LG ++P + K +++ S QA G H V+
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQA--G-KH--VV 465
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-A 122
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ AC +
Sbjct: 466 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACGS 523
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QDSHTT--------ITSL 168
G + L +T +G V + + G G S G ++ L+ QD +L
Sbjct: 524 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVAL 583
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G++Y+WG + ++G + + V P+ +E L + +A G+ H L++ S +
Sbjct: 584 TKDGQVYSWGKGDNQRLG-HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTED-SEV 641
Query: 229 YAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
+++G Q D+ + P + G
Sbjct: 642 HSWGSNDQCQHFDTLRVTKPEPSALPG 668
Score = 178 (67.7 bits), Expect = 4.0e-05, Sum P(5) = 4.0e-05
Identities = 72/240 (30%), Positives = 119/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G ++
Sbjct: 2881 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYA 2936
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 2937 -----CGEA------TNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 2984
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ +L S GELY
Sbjct: 2985 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSGELY 3042
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 3043 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3101
Score = 164 (62.8 bits), Expect = 0.00088, Sum P(5) = 0.00088
Identities = 65/236 (27%), Positives = 110/236 (46%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
P+ V+GLAS ++V+ A H + G H LAL GEV++WG G+LG D
Sbjct: 395 PQLVQGLASRNIVKIAA---H------SDG-HHYLALAATGEVYSWGCGDGGRLG--HGD 442
Query: 100 KKSQSIPKRVKGL----ASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ 151
PK + A VV G ++ +T+ G + + N G GS +
Sbjct: 443 TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 502
Query: 152 -------GVQSNLVQD----SHTTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR 199
G++ V D S T ++ G++++WG+ +YG++G S+ T P+
Sbjct: 503 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-PKL 561
Query: 200 VESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
+E L +L + + CG+ S L+K ++Y++G G +L H + P+L+ G
Sbjct: 562 IEKLQDLDVVKVRCGSQFSVALTKD-GQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 616
Score = 52 (23.4 bits), Expect = 3.0e-13, Sum P(4) = 3.0e-13
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3756 PIVRGGKQLLHSPFFKVLVALACDLELD 3783
Score = 50 (22.7 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
NM +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4454 NMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 4511
Score = 48 (22.0 bits), Expect = 3.0e-13, Sum P(4) = 3.0e-13
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4390 KVKFVGESVDDCGGGYSESIAEICEEL 4416
Score = 43 (20.2 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + + + +L T SV L G+++SQ
Sbjct: 4265 PIIALRNRLLLLHHISELFCPC-----IPMFDLEGSLDETGLGPSVGFDTLRGILISQ 4317
Score = 38 (18.4 bits), Expect = 3.0e-13, Sum P(4) = 3.0e-13
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1124 NMYFLIGTLCGLAI 1137
NM+ +G L G+AI
Sbjct: 4454 NMFRFLGVLLGIAI 4467
Score = 37 (18.1 bits), Expect = 8.7e-07, Sum P(5) = 8.7e-07
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +G+ A
Sbjct: 2577 YKWGSVTHQSVGVVKA 2592
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 15/69 (21%), Positives = 28/69 (40%)
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
SIV + + G++ + V P L + +R E+ +E +++Y E+
Sbjct: 1051 SIVLLLSKNAGLMQEAGAV--PLLGGLLEHLDRFNHLAPGKERDDLEELAWPGIMVYTES 1108
Query: 349 VFLSPGCMN 357
F C N
Sbjct: 1109 FFTGQNCRN 1117
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 231 (86.4 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 74/251 (29%), Positives = 117/251 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +H+ + G++FT+G T G LG DKKS IP+ V L + V+A G H
Sbjct: 421 GPYHTAVVTSAGQLFTFGDGTFGVLG--HGDKKSVFIPREVDSLKGLRTVRAACGVWHTA 478
Query: 63 VLTSTTGLWHSLALNDC--GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ + S + ++C G++FTWG G+LG +K+ + +P V L + Q
Sbjct: 479 AVVEV--MVGSSSSSNCSSGKLFTWGDGDKGRLG--HGNKEPKLVPTCVAALVEPNFCQV 534
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQDS-HTT-----------IT 166
G+S + LT+SG V T G G+ + G N V+ H + +
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVA 594
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
L S E+YTWG G++G + + P VESL + + IACG N F + +
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDR-NSPTLVESLKDKQVKSIACGTN--FTAAVCIH 651
Query: 227 RLYAFGIGSAV 237
R +A G+ ++
Sbjct: 652 R-WASGMDQSM 661
Score = 211 (79.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 79/260 (30%), Positives = 119/260 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HS A+ G+++TWG G LG ++ S +PKRV L V + A C
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLG--HGNEVSHWVPKRVNFLLEGIHVSSIA----C- 420
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G +H+ + G++FT+G T G LG DKKS IP+ V L + V+A
Sbjct: 421 ------GPYHTAVVTSAGQLFTFGDGTFGVLG--HGDKKSVFIPREVDSLKGLRTVRAAC 472
Query: 123 GYSHC-----LVLTSSGVVTCTHKENGCGSDPSQG-------------------VQSNLV 158
G H +++ SS C+ + D +G V+ N
Sbjct: 473 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFC 532
Query: 159 QDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP-IALIACGA 215
Q + H+ +L + G +YT G+ YGQ+G NS+ P RVE ++ + IACGA
Sbjct: 533 QVACGHSLTVALTTSGHVYTMGSPVYGQLG--NSHADGKTPNRVEGKLHKSFVEEIACGA 590
Query: 216 NHSFVLSKSVSRLYAFGIGS 235
H VL+ S + +Y +G GS
Sbjct: 591 YHVAVLT-SRTEVYTWGKGS 609
Score = 152 (58.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 61/228 (26%), Positives = 99/228 (43%)
Query: 14 GEVFTWG-GDTHGQLGL------ESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLVLT 65
G+VF WG G G LG S D K S+ PK ++ + V G H +++T
Sbjct: 265 GDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 324
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGY 124
GE F+WG ++ G+LG D Q PK + L + ++ + AC +
Sbjct: 325 KQ------------GESFSWGEESEGRLG-HGVDSNIQQ-PKLIDALNTTNIELVACGEF 370
Query: 125 SHCLVLTSSGVVTCTHKENGC---GSDPSQGVQSN---LVQDSHTTITS--------LNS 170
C V S + T + G G++ S V L++ H + + + S
Sbjct: 371 HSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTS 430
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
G+L+T+G+ +G +G + +V P+ V+SL L ACG H+
Sbjct: 431 AGQLFTFGDGTFGVLG-HGDKKSVFIPREVDSLKGLRTVRAACGVWHT 477
Score = 42 (19.8 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 5/23 (21%), Positives = 13/23 (56%)
Query: 442 SCNSKNPGVDMQLCQDCYDTIAR 464
+C + NP ++C C++ + +
Sbjct: 697 ACMAPNPNKPYRVCDKCFNKLKK 719
Score = 37 (18.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 782 DLKDL-SPTLAKSLQD 796
D+ D SPTL +SL+D
Sbjct: 617 DVDDRNSPTLVESLKD 632
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 249 (92.7 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 79/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3213
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 3271
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3272 AVTDAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322
Score = 227 (85.0 bits), Expect = 4.5e-10, Sum P(4) = 4.5e-10
Identities = 70/233 (30%), Positives = 107/233 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G+++TWG +G+LG +D + Q PK V+ L VV G
Sbjct: 4105 HSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG-------- 4154
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4155 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 4210
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T
Sbjct: 4211 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 4270
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 4271 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322
Score = 210 (79.0 bits), Expect = 3.1e-09, Sum P(4) = 3.1e-09
Identities = 76/266 (28%), Positives = 123/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH LT
Sbjct: 3059 HATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3117 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 3162
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3163 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ + ++Y
Sbjct: 3223 KSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA-GQVY 3280
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3281 AWGDNDHGQQGNGTTTVNRKPTLVQG 3306
Score = 210 (79.0 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 73/264 (27%), Positives = 122/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L + VV AG +H +T
Sbjct: 4053 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4110
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G+++TWG +G+LG +D + Q PK V+ L VV AC +G
Sbjct: 4111 AA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACGSG 4156
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 4157 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4216
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ +Y
Sbjct: 4217 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED-GEVY 4274
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 4275 TWGDNDEGQLGDGTTNAIQRPRLV 4298
Score = 195 (73.7 bits), Expect = 7.6e-07, Sum P(5) = 7.6e-07
Identities = 74/258 (28%), Positives = 121/258 (46%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 3012 GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3178
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3179 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 3236
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG 3254
Score = 194 (73.4 bits), Expect = 1.2e-07, Sum P(6) = 1.2e-07
Identities = 67/234 (28%), Positives = 108/234 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ G
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + VV+
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665
Query: 123 GYSHCLVLTSSGVVTCTHK-EN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V K +N G G++ P +G+Q V D T +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L I IACG SF S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 181 (68.8 bits), Expect = 2.1e-06, Sum P(6) = 2.1e-06
Identities = 74/268 (27%), Positives = 129/268 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
H LAL GEV++WG G+LG ++P + K +++ S QA G H V+
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQA--G-KH--VV 555
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-A 122
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ AC +
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACGS 613
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QD---------SHTTITS 167
G + L +T +G V + + G G S G ++ L+ QD S +I +
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI-A 672
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L G++Y+WG + ++G + + V P+ +E L + +A G+ H L++ S
Sbjct: 673 LTKDGQVYSWGKGDNQRLG-HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTED-SE 730
Query: 228 LYAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
++++G Q D+ + P + G
Sbjct: 731 VHSWGSNDQCQHFDTLRVTKPEPAALPG 758
Score = 178 (67.7 bits), Expect = 3.5e-05, Sum P(5) = 3.5e-05
Identities = 72/240 (30%), Positives = 119/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G ++
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYA 3016
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 3017 -----CGEA------TNGRLGL-GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 3064
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ +L S GELY
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSGELY 3122
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 3123 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 165 (63.1 bits), Expect = 7.2e-05, Sum P(6) = 7.2e-05
Identities = 65/236 (27%), Positives = 110/236 (46%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
P+ V+GLAS ++V+ A H + G H LAL GEV++WG G+LG D
Sbjct: 485 PQLVQGLASRNIVKIAA---H------SDG-HHYLALAATGEVYSWGCGDGGRLG--HGD 532
Query: 100 KKSQSIPKRVKGL----ASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ 151
PK + A VV G ++ +T+ G + + N G GS +
Sbjct: 533 TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 152 -------GVQSNLVQD----SHTTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR 199
G++ V D S T ++ G++++WG+ +YG++G S+ T P+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-PKL 651
Query: 200 VESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
+E L +L + + CG+ S L+K ++Y++G G +L H + P+L+ G
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 706
Score = 52 (23.4 bits), Expect = 3.2e-13, Sum P(4) = 3.2e-13
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3836 PIVRGGKQLLHSPFFKVLVALACDLELD 3863
Score = 50 (22.7 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
NM +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4534 NMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 4591
Score = 48 (22.0 bits), Expect = 3.2e-13, Sum P(4) = 3.2e-13
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4470 KVKFVGESVDDCGGGYSESIAEICEEL 4496
Score = 47 (21.6 bits), Expect = 1.2e-07, Sum P(6) = 1.2e-07
Identities = 30/132 (22%), Positives = 50/132 (37%)
Query: 415 WLYLETVF---LSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQD----------CYDT 461
WL ++F L ++ S+ + ++++H S P +LC D
Sbjct: 1337 WLQ-SSIFSGGLQTSQIHYSYNEEKDEDHCSSPGGTPASKSRLCSDRRALGDHSQAFLQA 1395
Query: 462 IA--RIERESVRSLVSNLAILASHAHLVKSLWNTP--PDAEALRMFLTLPLYHEFMNPRQ 517
IA I+ +V+ + + HL + P P E R+ L L HE +
Sbjct: 1396 IADNNIQDHNVKDFLCQIERYCRQCHLTTPITFPPEHPVEEVGRLLLCCLLKHEDLG--- 1452
Query: 518 HEILHMPFAGAL 529
H L + AG L
Sbjct: 1453 HVALSLVHAGTL 1464
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(6) = 1.2e-07
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 321 RLKECEREVEQLKSDETLDQDLLLYLETVFLS---PGCMNGSFLQVENDEHFSCNS--KK 375
R+ C + EQ + T DLLL + + +S PG G + + E S KK
Sbjct: 1034 RISSC-LDFEQHSRERTASLDLLLRFQRLLISKLYPGESIGQTSDISSHELMGVGSLLKK 1092
Query: 376 FSFIKLSLINWFMKLHFSI 394
++ + + I + + SI
Sbjct: 1093 YTALLCTHIGDILPVAASI 1111
Score = 43 (20.2 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + + + +L T SV L G+++SQ
Sbjct: 4345 PIIALRNRLLLLHHISELFCPC-----IPMFDLEGSLDETGLGPSVGFDTLRGILISQ 4397
Score = 38 (18.4 bits), Expect = 3.2e-13, Sum P(4) = 3.2e-13
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1124 NMYFLIGTLCGLAI 1137
NM+ +G L G+AI
Sbjct: 4534 NMFRFLGVLLGIAI 4547
Score = 38 (18.4 bits), Expect = 7.6e-07, Sum P(5) = 7.6e-07
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +G+ A
Sbjct: 2657 YKWGSVTHQSVGIVKA 2672
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 249 (92.7 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 79/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3118 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3174
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3175 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3223
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 3224 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 3281
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3282 AVTDAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3332
Score = 228 (85.3 bits), Expect = 3.6e-10, Sum P(4) = 3.6e-10
Identities = 70/233 (30%), Positives = 108/233 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G+++TWG +G+LG +D + Q PK V+ L VV G
Sbjct: 4115 HSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG-------- 4164
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4165 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 4220
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T +
Sbjct: 4221 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSED 4280
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 4281 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4332
Score = 210 (79.0 bits), Expect = 3.1e-09, Sum P(4) = 3.1e-09
Identities = 76/266 (28%), Positives = 123/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH LT
Sbjct: 3069 HATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3126
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3127 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 3172
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3173 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3232
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ + ++Y
Sbjct: 3233 KSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA-GQVY 3290
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3291 AWGDNDHGQQGNGTTTVNRKPTLVQG 3316
Score = 210 (79.0 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 74/264 (28%), Positives = 121/264 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L VV AG +H +T
Sbjct: 4063 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4120
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G+++TWG +G+LG +D + Q PK V+ L VV AC +G
Sbjct: 4121 AA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACGSG 4166
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 4167 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4226
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H S+ +Y
Sbjct: 4227 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSED-GEVY 4284
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 4285 TWGDNDEGQLGDGTTNAIQRPRLV 4308
Score = 195 (73.7 bits), Expect = 9.5e-07, Sum P(5) = 9.5e-07
Identities = 74/258 (28%), Positives = 121/258 (46%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 3022 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3070
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 3071 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3128
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 3129 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3188
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3189 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 3246
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3247 RLGHGSDVHVRKPQVVEG 3264
Score = 194 (73.4 bits), Expect = 1.2e-06, Sum P(5) = 1.2e-06
Identities = 67/234 (28%), Positives = 108/234 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ G
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + VV+
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665
Query: 123 GYSHCLVLTSSGVVTCTHK-EN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V K +N G G++ P +G+Q V D T +L
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L I IACG SF S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778
Score = 181 (68.8 bits), Expect = 2.2e-05, Sum P(5) = 2.2e-05
Identities = 72/267 (26%), Positives = 126/267 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
H LAL GEV++WG G+LG ++P + K +++ S QA G H V+
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQA--G-KH--VV 555
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-A 122
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ AC +
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACGS 613
Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QDSHTT--------ITSL 168
G + L +T +G V + + G G S G ++ L+ QD +L
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVAL 673
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G++Y+WG + ++G + + V P+ +E L + +A G+ H L++ S +
Sbjct: 674 TKDGQVYSWGKGDNQRLG-HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTED-SEV 731
Query: 229 YAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
+++G Q D+ + P + G
Sbjct: 732 HSWGSNDQCQHFDTLRVTKPEPSALPG 758
Score = 178 (67.7 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 72/240 (30%), Positives = 119/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G ++
Sbjct: 2971 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYA 3026
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 3027 -----CGEA------TNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 3074
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ +L S GELY
Sbjct: 3075 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSGELY 3132
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 3133 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3191
Score = 164 (62.8 bits), Expect = 0.00096, Sum P(5) = 0.00096
Identities = 65/236 (27%), Positives = 110/236 (46%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
P+ V+GLAS ++V+ A H + G H LAL GEV++WG G+LG D
Sbjct: 485 PQLVQGLASRNIVKIAA---H------SDG-HHYLALAATGEVYSWGCGDGGRLG--HGD 532
Query: 100 KKSQSIPKRVKGL----ASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ 151
PK + A VV G ++ +T+ G + + N G GS +
Sbjct: 533 TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 152 -------GVQSNLVQD----SHTTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR 199
G++ V D S T ++ G++++WG+ +YG++G S+ T P+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-PKL 651
Query: 200 VESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
+E L +L + + CG+ S L+K ++Y++G G +L H + P+L+ G
Sbjct: 652 IEKLQDLDVVKVRCGSQFSVALTKD-GQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 706
Score = 52 (23.4 bits), Expect = 3.2e-13, Sum P(4) = 3.2e-13
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3846 PIVRGGKQLLHSPFFKVLVALACDLELD 3873
Score = 50 (22.7 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
NM +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4544 NMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 4601
Score = 48 (22.0 bits), Expect = 3.2e-13, Sum P(4) = 3.2e-13
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4480 KVKFVGESVDDCGGGYSESIAEICEEL 4506
Score = 43 (20.2 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + + + +L T SV L G+++SQ
Sbjct: 4355 PIIALRNRLLLLHHISELFCPC-----IPMFDLEGSLDETGLGPSVGFDTLRGILISQ 4407
Score = 38 (18.4 bits), Expect = 3.2e-13, Sum P(4) = 3.2e-13
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1124 NMYFLIGTLCGLAI 1137
NM+ +G L G+AI
Sbjct: 4544 NMFRFLGVLLGIAI 4557
Score = 37 (18.1 bits), Expect = 9.5e-07, Sum P(5) = 9.5e-07
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +G+ A
Sbjct: 2667 YKWGSVTHQSVGVVKA 2682
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(5) = 1.2e-06
Identities = 15/69 (21%), Positives = 28/69 (40%)
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
SIV + + G++ + V P L + +R E+ +E +++Y E+
Sbjct: 1141 SIVLLLSKNAGLMQEAGAV--PLLGGLLEHLDRFNHLAPGKERDDLEELAWPGIMVYTES 1198
Query: 349 VFLSPGCMN 357
F C N
Sbjct: 1199 FFTGQNCRN 1207
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 244 (91.0 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 77/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3167
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3168 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3216
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G G+D P +G++ + H + +L+
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 3274
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3275 AVTDTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325
Score = 234 (87.4 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 71/235 (30%), Positives = 108/235 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G++FTWG +G+LG D + Q PK V+ L V+ G
Sbjct: 4107 HSACITAAGDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG-------- 4156
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4157 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTDLGVVKVECGSQ 4212
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLV-----QDSHTTITSLN 169
+ LT SG V K + G GSD P Q G+Q V H + +
Sbjct: 4213 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 4272
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L I +ACG+ H+ S S
Sbjct: 4273 GLGEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKINRVACGSAHTLAWSTS 4326
Score = 215 (80.7 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 73/265 (27%), Positives = 122/265 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L + VV AG +H +T
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G++FTWG +G+LG D + Q PK V+ L V+ AC +G
Sbjct: 4113 AA------------GDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACGSG 4158
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 4159 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALT 4218
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS-VSRL 228
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ + +
Sbjct: 4219 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEV 4277
Query: 229 YAFGIGSAVQL-DSPKSVHKTPQLI 252
Y +G QL D + + P+L+
Sbjct: 4278 YTWGDNDEGQLGDGTTNAIQRPRLV 4302
Score = 207 (77.9 bits), Expect = 6.3e-09, Sum P(4) = 6.3e-09
Identities = 73/266 (27%), Positives = 124/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H++AL G++F+WG G+LG S + + P+ ++ L + + G SH +T
Sbjct: 3062 HAMALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3120 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 3165
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3166 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + ++ V KPQ VE L I +A GA H ++ + ++Y
Sbjct: 3226 KSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT-GQVY 3283
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3284 AWGDNDHGQQGNGTTTVNRKPTLVQG 3309
Score = 194 (73.4 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 76/267 (28%), Positives = 126/267 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEVF+WG G+LG D PK + L+ AG H V+
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLG--HGDTVPLEEPKLISALSGKQ-----AG-KH--VVH 556
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
G +S A+ GE++TWG +G+LG S++ Q+IP V GL + V+ +C +G
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCGSG 614
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QD---------SHTTITSL 168
+ L +T +G V + + G G S G ++ L+ QD S +I +L
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI-AL 673
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G++YTWG + ++G + + V P+ +E L + +A G+ H L++ S +
Sbjct: 674 TKDGQVYTWGKGDNQRLG-HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTED-SEV 731
Query: 229 YAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
+++G Q D+ + P + G
Sbjct: 732 HSWGSNDQCQHFDTLRITKPEPAALPG 758
Score = 191 (72.3 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 66/234 (28%), Positives = 108/234 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ Q+IP V GL + V+ G
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 612
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + +V+
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVRC 665
Query: 123 GYSHCLVLTSSG-VVTCTHKEN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V T +N G G++ P +G++ V D T +L
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 725
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L I IACG SF S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 191 (72.3 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 71/258 (27%), Positives = 122/258 (47%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + IP+++ L++ VV+ A +S G H+
Sbjct: 3015 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 3063
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL G++F+WG G+LG S + + P+ ++ L + + G SH +TSS
Sbjct: 3064 MALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3181
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3182 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 3239
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3240 RLGHGTDVHVRKPQVVEG 3257
Score = 175 (66.7 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 69/240 (28%), Positives = 120/240 (50%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G ++
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYA 3019
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L++ V V +G H + LT
Sbjct: 3020 -----CGEA------TNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT 3067
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G + + ++G G P + +++ ++D SH+ ++ S GELY
Sbjct: 3068 VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--AITSSGELY 3125
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 3126 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Score = 52 (23.4 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3838 PIVRGGKQLLHSPFFKVLVALACDLELD 3865
Score = 49 (22.3 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
NM +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4538 NMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLMYIRD 4595
Score = 48 (22.0 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4474 KVKFVGESVDDCGGGYSESIAEMCEEL 4500
Score = 47 (21.6 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + L E R TG + SV L G+++SQ
Sbjct: 4349 PIISLRNRLLLLHHISELFCPCIPMFDL---EGRLDETG--QGPSVGFDTLRGILISQ 4401
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1124 NMYFLIGTLCGLAI 1137
NM+ +G L G+AI
Sbjct: 4538 NMFRFLGVLLGIAI 4551
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +G+ A
Sbjct: 2660 YKWGSVTHRSVGVVKA 2675
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 244 (91.0 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 77/233 (33%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3167
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3168 ---------QTLALTDEGLVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3216
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G G+D P +G++ + H + +L+
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIV--HVAVGALHCL 3274
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3275 AVTDTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325
Score = 234 (87.4 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 71/235 (30%), Positives = 108/235 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + G++FTWG +G+LG D + Q PK V+ L V+ G
Sbjct: 4107 HSACITAAGDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG-------- 4156
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4157 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTDLGVVKVECGSQ 4212
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLV-----QDSHTTITSLN 169
+ LT SG V K + G GSD P Q G+Q V H + +
Sbjct: 4213 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 4272
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L I +ACG+ H+ S S
Sbjct: 4273 GLGEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKINRVACGSAHTLAWSTS 4326
Score = 215 (80.7 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 73/265 (27%), Positives = 122/265 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEV++WG G+LG ++ P+ ++ L + VV AG +H +T
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
+ G++FTWG +G+LG D + Q PK V+ L V+ AC +G
Sbjct: 4113 AA------------GDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACGSG 4158
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT V + + G G S G + + DS T + +L
Sbjct: 4159 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALT 4218
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS-VSRL 228
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ + +
Sbjct: 4219 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEV 4277
Query: 229 YAFGIGSAVQL-DSPKSVHKTPQLI 252
Y +G QL D + + P+L+
Sbjct: 4278 YTWGDNDEGQLGDGTTNAIQRPRLV 4302
Score = 207 (77.9 bits), Expect = 6.3e-09, Sum P(4) = 6.3e-09
Identities = 73/266 (27%), Positives = 124/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H++AL G++F+WG G+LG S + + P+ ++ L + + G SH +T
Sbjct: 3062 HAMALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3120 SS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSR 3165
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3166 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + ++ V KPQ VE L I +A GA H ++ + ++Y
Sbjct: 3226 KSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT-GQVY 3283
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3284 AWGDNDHGQQGNGTTTVNRKPTLVQG 3309
Score = 194 (73.4 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 76/267 (28%), Positives = 126/267 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEVF+WG G+LG D PK + L+ AG H V+
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLG--HGDTVPLEEPKLISALSGKQ-----AG-KH--VVH 556
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
G +S A+ GE++TWG +G+LG S++ Q+IP V GL + V+ +C +G
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCGSG 614
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QD---------SHTTITSL 168
+ L +T +G V + + G G S G ++ L+ QD S +I +L
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI-AL 673
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G++YTWG + ++G + + V P+ +E L + +A G+ H L++ S +
Sbjct: 674 TKDGQVYTWGKGDNQRLG-HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTED-SEV 731
Query: 229 YAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
+++G Q D+ + P + G
Sbjct: 732 HSWGSNDQCQHFDTLRITKPEPAALPG 758
Score = 191 (72.3 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 66/234 (28%), Positives = 108/234 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ Q+IP V GL + V+ G
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 612
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + +V+
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVRC 665
Query: 123 GYSHCLVLTSSG-VVTCTHKEN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V T +N G G++ P +G++ V D T +L
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 725
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L I IACG SF S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 191 (72.3 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 71/258 (27%), Positives = 122/258 (47%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + IP+++ L++ VV+ A +S G H+
Sbjct: 3015 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 3063
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL G++F+WG G+LG S + + P+ ++ L + + G SH +TSS
Sbjct: 3064 MALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYTW 177
G + T E G G D + ++ +V+ H I +L G +++W
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3181
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3182 GDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYF 3239
Query: 238 QLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3240 RLGHGTDVHVRKPQVVEG 3257
Score = 175 (66.7 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 69/240 (28%), Positives = 120/240 (50%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ AG S L + G ++
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQV-AGGSKSLFAVTVEGKVYA 3019
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
CGE T+G+LGL + IP+++ L++ V V +G H + LT
Sbjct: 3020 -----CGEA------TNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT 3067
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G + + ++G G P + +++ ++D SH+ ++ S GELY
Sbjct: 3068 VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--AITSSGELY 3125
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
TWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+ + L +++G G
Sbjct: 3126 TWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Score = 52 (23.4 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3838 PIVRGGKQLLHSPFFKVLVALACDLELD 3865
Score = 49 (22.3 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
NM +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4538 NMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLMYIRD 4595
Score = 48 (22.0 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4474 KVKFVGESVDDCGGGYSESIAEMCEEL 4500
Score = 47 (21.6 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 596 PIVLMHGTLPLVIYCDQYFFPCPSCYTLALMEPRSTLTGTLKRASVIVCGLTGLVLSQ 653
PI+ + L L+ + + F PC + L E R TG + SV L G+++SQ
Sbjct: 4349 PIISLRNRLLLLHHISELFCPCIPMFDL---EGRLDETG--QGPSVGFDTLRGILISQ 4401
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1124 NMYFLIGTLCGLAI 1137
NM+ +G L G+AI
Sbjct: 4538 NMFRFLGVLLGIAI 4551
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +G+ A
Sbjct: 2660 YKWGSVTHRSVGVVKA 2675
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 228 (85.3 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 72/236 (30%), Positives = 105/236 (44%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTSTTGLWH 72
GEVFTWG + + QLG + +P + L++ V++ G H LVLTS
Sbjct: 118 GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD----- 170
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVLT 131
GEVF WG + GQ+G S +Q IP+RV G L + VV G C+ +
Sbjct: 171 -------GEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 221
Query: 132 SSG-VVTCTHKENG------CGSDPS-------QGVQSNLVQDSHTTITSLNSPGELYTW 177
+G V + NG G+ P+ QG++ V + L G++Y W
Sbjct: 222 DTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 178 GNNEYGQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
G N YGQ+G N SN + P VE + I + AC + H+ +Y +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 208 (78.3 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 64/191 (33%), Positives = 94/191 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSL L GEVF WG + GQ+G S +Q IP+RV G C + +
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTG---------CL--QNKV 206
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V+T G +A+ D GEV+ WG + +GQLGL ++ +Q P RV L + V +
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSG--NQPTPCRVAALQGIRVQRVAC 264
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGSDPSQG------VQSNLVQD---SHTTITSL- 168
GY+H LVLT G V ++ + G G+ +Q V+ + + + H+T TS
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAA 324
Query: 169 -NSPGELYTWG 178
G +Y WG
Sbjct: 325 KTQGGHVYMWG 335
Score = 39 (18.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 368 HFSCNSKKFSFIKLSLINW 386
HFSC F+ + W
Sbjct: 349 HFSCTDDVFACFATPAVTW 367
Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 994 DNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQ 1029
DN ED I E+++++ ++ L+ T I L+P+
Sbjct: 425 DN--EDDIVEMSEFSYPVYRAFLEYLYTDSISLSPE 458
>UNIPROTKB|J9NVI9 [details] [associations]
symbol:J9NVI9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03011084
Ensembl:ENSCAFT00000044397 OMA:NEESKLM Uniprot:J9NVI9
Length = 460
Score = 209 (78.6 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 45/99 (45%), Positives = 61/99 (61%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y E S +WF T + + F G LCG ++ N+ + N+PFPLAL+KK+LD
Sbjct: 263 YGMFTYPEDASYMWFPV-TPKFEKRYFFFGVLCGFSLINFNVANIPFPLALFKKLLDRTP 321
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
L+DLK+LSP L KSLQ +LD D +VF I F +W
Sbjct: 322 SLEDLKELSPVLGKSLQTLLDDEGDDFGEVFLIYFNVHW 360
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 40/153 (26%), Positives = 69/153 (45%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNI 996
++ FIF+ +K LL D ++++ + L Q + L + V R ++
Sbjct: 152 HFTFIFNILSKIKLLYADSLLKIQEKKFRACMRLAGIMEQGGSELALLPTFNLTVRRSHL 211
Query: 997 VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
+ED + L Q+ D ++ L V+ F E D+GGV+ EF + +E+
Sbjct: 212 IEDVLNHLNQFENEDLRRELMVS------------FSEEIGHDSGGVKVEFFHCVFEEMT 259
Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
P+YGMF E+ +WF T + + YF G
Sbjct: 260 QPEYGMFTYPEDASYMWFPV-TPKFEKRYFFFG 291
>POMBASE|SPBP8B7.27 [details] [associations]
symbol:mug30 "ubiquitin-protein ligase E3 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=NAS] [GO:0019787 "small conjugating
protein ligase activity" evidence=ISM] [GO:0032153 "cell division
site" evidence=IDA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] [GO:0051286 "cell tip" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR001607 PROSITE:PS50237 SMART:SM00119
SMART:SM00290 UniPathway:UPA00143 PomBase:SPBP8B7.27 GO:GO:0005634
GO:GO:0007126 GO:GO:0005737 GO:GO:0032153 GO:GO:0044732
GO:GO:0051286 EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR
GO:GO:0016567 GO:GO:0004842 GO:GO:0019787 SUPFAM:SSF56204
eggNOG:COG5021 KO:K12232 HSSP:Q9UEP9 OrthoDB:EOG42Z7Z7 PIR:T40821
RefSeq:NP_596534.1 ProteinModelPortal:O94275 PRIDE:O94275
EnsemblFungi:SPBP8B7.27.1 GeneID:2541379 KEGG:spo:SPBP8B7.27
NextBio:20802488 Uniprot:O94275
Length = 807
Score = 213 (80.0 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 48/138 (34%), Positives = 79/138 (57%)
Query: 939 CNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVE 998
C YPF+ AK ++L++D R +ME + F L N + YL + V RD ++E
Sbjct: 388 CQYPFLLSMGAKISILQLDARRKMEIKAREAFFSSILSKMN---VEPYLMIRVRRDRLLE 444
Query: 999 DTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
D++R++ DF+K LKV +F GEE DAGG++RE+L+LL +++ P
Sbjct: 445 DSLRQIND-RNKDFRKALKV------------EFLGEEGIDAGGLKREWLLLLTRKVFSP 491
Query: 1059 KYGMFKEYEETRS-IWFS 1075
++G+F EE+ + +WF+
Sbjct: 492 EFGLFVNCEESSNYLWFN 509
Score = 132 (51.5 bits), Expect = 0.00014, P = 0.00014
Identities = 27/89 (30%), Positives = 52/89 (58%)
Query: 726 EETRSIWFS-EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLK 784
E + +WF+ ++ + + G L G+AI+N +++ P A YKK+L P+ DL
Sbjct: 501 ESSNYLWFNYSHRSKEIDYYHMSGILMGIAIHNSINLDVQMPRAFYKKLLQLPLSFNDLD 560
Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITF 813
D P+L + L+++L + E D+++ +G+ F
Sbjct: 561 DFQPSLYRGLKELLLF-EGDVKNTYGLNF 588
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 237 (88.5 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 76/233 (32%), Positives = 111/233 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ GE+++WG +G+LG D +Q PK VK L VVQ G
Sbjct: 3103 GSSHSAAITSSGELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVVQVACGSRDA- 3159
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG ++ +IP+ ++ L V Q
Sbjct: 3160 ---------QTLALTDEGMVFSWGDGDFGKLGRGGSE--GCNIPQNIERLNGQGVCQIEC 3208
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G G+D P +G++ + H + +L+
Sbjct: 3209 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIV--HVAVGALHCL 3266
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHS 218
G+++ WG+N++GQ G N TTV KP V+ L I +ACG++HS
Sbjct: 3267 AVTETGQVFAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3317
Score = 228 (85.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 71/233 (30%), Positives = 106/233 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + GE++TWG +G+LG D + Q PK V+ L V+ G
Sbjct: 4100 HSACITASGELYTWGKGRYGRLG--HGDSEDQLKPKLVEALQGHRVIDVACG-------- 4149
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G +L L D V++WG +G+LG +D +P ++ L + VV+ G
Sbjct: 4150 --SGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVECGSQ 4205
Query: 126 HCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQDSHTT---ITSLNSP 171
+ LT SG V K + G GSD P Q G+Q V T
Sbjct: 4206 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED 4265
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L I +ACG+ H+ S S
Sbjct: 4266 GEVYTWGDNDEGQLGDGTTNA-IQRPRLVAALQGKKINRVACGSAHTLAWSTS 4317
Score = 211 (79.3 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 73/264 (27%), Positives = 123/264 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GE+++WG G+LG ++ P+ ++ L V VV AG +H +T
Sbjct: 4048 HCLALSSEGELYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 4105
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
++ GE++TWG +G+LG D + Q PK V+ L V+ AC +G
Sbjct: 4106 AS------------GELYTWGKGRYGRLG--HGDSEDQLKPKLVEALQGHRVIDVACGSG 4151
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
+ L LT +V + + G G S G + + DS T + +L
Sbjct: 4152 DAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4211
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG +Y ++G + S+ V +P++V+ L + IA G+ H ++ +Y
Sbjct: 4212 KSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED-GEVY 4269
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 4270 TWGDNDEGQLGDGTTNAIQRPRLV 4293
Score = 204 (76.9 bits), Expect = 7.1e-10, Sum P(3) = 7.1e-10
Identities = 73/266 (27%), Positives = 125/266 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H++AL G+VF+WG G+LG S + + P+ ++ L + + G SH +T
Sbjct: 3054 HAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3111
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S+ GE+++WG +G+LG D +Q PK VK L VVQ G
Sbjct: 3112 SS------------GELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVVQVACGSR 3157
Query: 125 -SHCLVLTSSGVV-TCTHKENG-CGSDPSQG--VQSNL----------VQDSHTTITSLN 169
+ L LT G+V + + G G S+G + N+ ++ +L
Sbjct: 3158 DAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3217
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++TWG +Y ++G + ++ V KPQ VE L I +A GA H ++++ +++
Sbjct: 3218 KSGVVWTWGKGDYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTET-GQVF 3275
Query: 230 AFGIGS-AVQLDSPKSVHKTPQLIHG 254
A+G Q + +V++ P L+ G
Sbjct: 3276 AWGDNDHGQQGNGTTTVNRKPTLVQG 3301
Score = 193 (73.0 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 70/259 (27%), Positives = 122/259 (47%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + IP+++ L++ VV+ A +S G H+
Sbjct: 3007 GKVYACGEATNGRLGL-GLSSGTIPIPRQISALSNY-VVKKVAVHS---------GGRHA 3055
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL G+VF+WG G+LG S + + P+ ++ L + + G SH +TSS
Sbjct: 3056 MALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3113
Query: 134 GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
G + + G G + +Q ++ LV+ H + +L G +++
Sbjct: 3114 GELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFS 3172
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
WG+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3173 WGDGDFGKLGRGGSEGC-NIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3230
Query: 237 VQLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3231 FRLGHGTDVHVRKPQMVEG 3249
Score = 189 (71.6 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 65/231 (28%), Positives = 106/231 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE+ TWG +G+LG S++ Q+ P V L + V+ G
Sbjct: 549 GSTYSAAITADGELHTWGRGNYGRLGHGSSE--DQTTPMLVTALKGLKVIDVACG----- 601
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK V+ L + +V+ C
Sbjct: 602 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLVEKLQDLDIVKVCC 654
Query: 123 GYSHCLVLTSSG-VVTCTHKEN---GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
G + LT G V T +N G G+D P +Q V D T +L
Sbjct: 655 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLAL 714
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
GE+++WG+N+ Q + + +P+ + L + I I+CG SF
Sbjct: 715 TEEGEVHSWGSNDKLQH-FDTLFSNKKQPKALPGLNSKHIVGISCGPGQSF 764
Score = 171 (65.3 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 73/267 (27%), Positives = 124/267 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL+ GEVF+WG G+LG D P + + V + V+
Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLG--HGDTTYLEEPTMISVFSGRPVGKQ--------VVH 545
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
G +S A+ GE+ TWG +G+LG S++ Q+ P V L + V+ AC +G
Sbjct: 546 IACGSTYSAAITADGELHTWGRGNYGRLGHGSSE--DQTTPMLVTALKGLKVIDVACGSG 603
Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQS-NLV---QD---------SHTTITSL 168
+ L +T +G V + + G G S G ++ LV QD S ++ +L
Sbjct: 604 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSV-AL 662
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G++YTWG + ++G + ++ V P+ ++SL + IA G+ H L++ +
Sbjct: 663 TKDGQVYTWGKGDNQRLG-HGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEE-GEV 720
Query: 229 YAFGIGSAVQ-LDSPKSVHKTPQLIHG 254
+++G +Q D+ S K P+ + G
Sbjct: 721 HSWGSNDKLQHFDTLFSNKKQPKALPG 747
Score = 169 (64.5 bits), Expect = 4.9e-05, Sum P(4) = 4.9e-05
Identities = 64/240 (26%), Positives = 118/240 (49%)
Query: 15 EVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
+VF WG + QLG L+ + K +P + L++++VVQ G +T+
Sbjct: 2956 KVFVWGLNDKDQLGGLKGSKIK---VPSFSETLSALNVVQVAGGSKSLFAVTAE------ 3006
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLT 131
G+V+ G T+G+LGL + IP+++ L++ V V +G H + LT
Sbjct: 3007 ------GKVYACGEATNGRLGL-GLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALT 3059
Query: 132 SSG-VVTCTHKENG-CG-------SDPS--QGVQSNLVQD-----SHTTITSLNSPGELY 175
G V + ++G G P + +++ ++D SH+ ++ S GELY
Sbjct: 3060 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--AITSSGELY 3117
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS-VSRLYAFGIG 234
+WG EYG++G + NTT +P+ V+ L+ + +ACG+ + L+ + ++++G G
Sbjct: 3118 SWGLGEYGRLG-HGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDG 3176
Score = 162 (62.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W +L+ G ++ WG + GQLG +E A K +P + LA++ VQ G
Sbjct: 3942 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPTEALATLRPVQLIGGEQTLFA 3997
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQAC 121
+T+ G+++ G G+LG+ + S S P ++ + V + V
Sbjct: 3998 VTAD------------GKLYATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIRKVAVN 4043
Query: 122 AGYSHCLVLTSSG-VVTCTHKENG---------CGS----DPSQGVQSNLVQDSHTTITS 167
+G HCL L+S G + + E+G C + +GV+ +
Sbjct: 4044 SGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSAC 4103
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
+ + GELYTWG YG++G +S + KP+ VE+L + +ACG+ + L
Sbjct: 4104 ITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGHRVIDVACGSGDAQTL 4156
Score = 151 (58.2 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 43/135 (31%), Positives = 60/135 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G V+TWG + +LG D + P+ V+GL +V G HCL
Sbjct: 3209 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQMVEGLRGKKIVHVAVGALHCL 3266
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T T G+VF WG + HGQ G + + P V+GL + +
Sbjct: 3267 AVTET------------GQVFAWGDNDHGQQGNGTTTVNRK--PTLVQGLEGQKITRVAC 3312
Query: 123 GYSHCLVLTSSGVVT 137
G SH + T+ V T
Sbjct: 3313 GSSHSVAWTTVDVTT 3327
Score = 52 (23.4 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG+++ ++ F+ +A CD+ +D
Sbjct: 3831 PIVRGGKQLLHSPFFKVLVALACDLELD 3858
Score = 48 (22.0 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + +E+
Sbjct: 4465 KVKFVGESVDDCGGGYSESIAEMCEEL 4491
Score = 44 (20.5 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYR 801
+M +G L G+AI + +++ ++K++ + + DL ++ L I D
Sbjct: 4529 SMFRFLGVLLGIAIRTGSPLSLYLAEPVWKQLAGMNLTIADLSEVDKDFIPGLMYIRD-N 4587
Query: 802 EPDLED 807
E E+
Sbjct: 4588 EASAEE 4593
Score = 42 (19.8 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 437 NDEHFSCNSKNPGVDMQLCQDCYDTIARIERES 469
N F C S + D C+ C+ T R S
Sbjct: 2713 NGPRFKCRSCD---DFDFCESCFKTRKHNPRHS 2742
Score = 38 (18.4 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 863 LQVLQKLNSLNNETLTSSISAGGRTVSNIRT 893
L L + N+L NE + S +S G ++ T
Sbjct: 2147 LHSLSQWNALINEYINSQLSGIGDVMAGRHT 2177
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 17 FTWGGDTHGQLGLESA 32
+ WG TH +G+ A
Sbjct: 2652 YKWGSVTHRSVGVVKA 2667
Score = 37 (18.1 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 842 QPGVVDSTNGDITFNRKLSFC-----LQVLQKLNSLNNETLTSSISAGGRTVSNIRT 893
QP DS D T + C + + +N L +L+S I A V + T
Sbjct: 1929 QPATEDSDTEDDTEGEVMEKCAHPTAIMLTSTVNLLKTLSLSSGIHAEVMQVDAVST 1985
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 211 (79.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 67/237 (28%), Positives = 115/237 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G + S A+ + G++F WG ++ GQ+GL ADK S+P +V VS + +C GY H
Sbjct: 150 GSYTSAAVTEDGQLFVWGDNSEGQIGL--ADKTCVSVPCQVDVGKPVSSI-SC-GYYHSA 205
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T GE++T+G +G+LGL K+ +P+ V G+ AC
Sbjct: 206 FITGD------------GELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACG 253
Query: 123 GYSHCLVLTSSGVVTC---THKENGCG------SDPS--QGVQSNLVQ-----DSHTTIT 166
G H +VLT +GV T + + G G S P + ++S+ + +SHT +
Sbjct: 254 G-EHTVVLTETGVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI 312
Query: 167 SLNSPGELYTWGNNEYGQMGINNSN-TTVTKPQRVESLVNLPIALIACGANHSFVLS 222
+ G ++T+G+ +G++G+ N P + ++ + L+ACG H V +
Sbjct: 313 ADTENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFA 369
Score = 190 (71.9 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 95/352 (26%), Positives = 154/352 (43%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+L + G V+ GG++ GQLGL ++++ L S Q H +
Sbjct: 100 HTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTF------HLISFFTNQ------H-KIKQ 146
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G + S A+ + G++F WG ++ GQ+GL ADK S+P +V VS + +C GY
Sbjct: 147 LAAGSYTSAAVTEDGQLFVWGDNSEGQIGL--ADKTCVSVPCQVDVGKPVSSI-SC-GYY 202
Query: 126 HCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQDSHTTITSLNSP---GE------- 173
H +T G + T ENG G P Q S + Q + +N GE
Sbjct: 203 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 262
Query: 174 --LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YA 230
+YT+G +YGQ+G + P+ V+ L + I + CG +H+ V++ + + L +
Sbjct: 263 TGVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFT 322
Query: 231 FGIG--SAVQLDSPKSVHKTPQLIHGPWIASPVAMTA--GEDSLV------SHSGGLVVK 280
FG G + L ++ + +++ V + A G LV S ++++
Sbjct: 323 FGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFATPRPKESEEILLE 382
Query: 281 KIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQL 332
IY I TV+K + D V N Q+ R +E ER EQL
Sbjct: 383 DIYES--RLISTVSK-----MGGDSLVTN-TLQLTSARMRR-RERERSPEQL 425
Score = 171 (65.3 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 69/257 (26%), Positives = 112/257 (43%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ + G+++ +G + GQLGL S K + P VK L A G +H LV T
Sbjct: 48 HTAVVTGNGKLYMFGSNDWGQLGLGS--KNTVRKPTCVKALKPEKTKLAVCGRNHTLVYT 105
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-------SIPKRVKGLASVSVV 118
G V+ GG++ GQLGL ++++ + ++K LA+ S
Sbjct: 106 EK------------GNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYT 153
Query: 119 QACAGYSHCLVL---TSSGVVTCTHKENGCGSDPSQ---GVQSNLVQDSHTTITSLNSPG 172
A L + S G + K C S P Q G + + + + G
Sbjct: 154 SAAVTEDGQLFVWGDNSEGQIGLADKT--CVSVPCQVDVGKPVSSISCGYYHSAFITGDG 211
Query: 173 ELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
ELYT+G E G++G+ ++ PQ V ++ + +ACG H+ VL+++ +Y F
Sbjct: 212 ELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTET--GVYTF 268
Query: 232 GIGSAVQLDSPKSVHKT 248
G+G QL + KT
Sbjct: 269 GLGQYGQLGHGTLLFKT 285
Score = 133 (51.9 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
D HT + + N G+LY +G+N++GQ+G+ + NT V KP V++L L CG NH+
Sbjct: 46 DEHTAVVTGN--GKLYMFGSNDWGQLGLGSKNT-VRKPTCVKALKPEKTKLAVCGRNHTL 102
Query: 220 VLSKSVSRLYAFGIGSAVQL 239
V ++ +YA G S QL
Sbjct: 103 VYTEK-GNVYAAGGNSEGQL 121
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 223 (83.6 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 74/242 (30%), Positives = 105/242 (43%)
Query: 8 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTS 66
LA D GEVFTWG + + QLG + +P + L++ V++ G H LVLTS
Sbjct: 113 LATTD-GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ--ACAGY 124
GEVF WG + GQ+G S +Q IP+RV G VV AC
Sbjct: 170 D------------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIACGQM 215
Query: 125 SHCLVLTSSGVVTCTHKENG------CGSDPS-------QGVQSNLVQDSHTTITSLNSP 171
V+ + V + NG G+ P+ QG++ V + L
Sbjct: 216 CSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE 275
Query: 172 GELYTWGNNEYGQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G++Y WG N YGQ+G N SN + P VE + I + AC + H+ +Y
Sbjct: 276 GQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYM 333
Query: 231 FG 232
+G
Sbjct: 334 WG 335
Score = 221 (82.9 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 83/288 (28%), Positives = 127/288 (44%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
+ND E+F G + G LG+ D +S P+R+ L + G +VL +T G
Sbjct: 63 VND--EIFVLGTNCSGCLGV--GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDG 118
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCL 128
EVFTWG + + QLG + +P + L++ V++ G H L
Sbjct: 119 -----------EVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 165
Query: 129 VLTSSGVVTCTHKEN----GCGSDPSQGV--------QSNLVQD---SHTTITSLNSPGE 173
VLTS G V N G GS +Q + Q+ +V + ++ GE
Sbjct: 166 VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGE 225
Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
+Y WG N GQ+G+ +S T P RV +L + + +ACG H+ VL+ ++YA+G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQIYAWGA 283
Query: 234 GSAVQLDSP-KS--VHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
S QL + KS + TP ++ I A + S GG V
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331
Score = 213 (80.0 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 65/191 (34%), Positives = 91/191 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSL L GEVF WG + GQ+G S +Q IP+RV G VV A C
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIA----C- 212
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G S+A+ D GEV+ WG + +GQLGL S+ +Q P RV L + V +
Sbjct: 213 ------GQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDS---------HTTITSL- 168
GY+H LVLT G + ++ + G G+ +Q + +V + H+ TS
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAA 324
Query: 169 -NSPGELYTWG 178
G +Y WG
Sbjct: 325 KTQGGHVYMWG 335
Score = 38 (18.4 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 998 EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQ 1029
ED I E+++++ F+ L+ T I L+P+
Sbjct: 427 EDDIVEMSEFSYPVFRAFLEYLYTDNISLSPE 458
Score = 37 (18.1 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 354 GCMNGSFLQVENDEHFSCNSKKFSFIKLSLINW 386
G G + + + HF C F+ + W
Sbjct: 335 GQCRGQSVILPHHTHFCCTDDVFACFATPAVTW 367
>UNIPROTKB|F1MA03 [details] [associations]
symbol:F1MA03 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 IPI:IPI00869690
Ensembl:ENSRNOT00000024963 Uniprot:F1MA03
Length = 754
Score = 206 (77.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/188 (29%), Positives = 90/188 (47%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
V YT FY L + D+ +Y W S N +R C YPF+ AK +++ D Q
Sbjct: 312 VPYTDFYNSTLDHI-DLMEEYHTWQSFG-NSHSRFSFCQYPFVISITAKKIIIQRDSEQQ 369
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 370 MISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 426
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 427 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDN 476
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 477 YSEFRLVG 484
Score = 127 (49.8 bits), Expect = 0.00044, P = 0.00044
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L P+
Sbjct: 455 YGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPV 514
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ + DL + P LA L+++L Y E ++E+ F TF+
Sbjct: 515 VPSDQSTPVGICSVTIDDLCQIMPELAHGLKELLSY-EGNVEEDFYSTFQ 563
>UNIPROTKB|I3LHR3 [details] [associations]
symbol:LOC100156944 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 GO:GO:0016567
GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:ICLDVRQ EMBL:AEMK01080538
EMBL:AEMK01080558 EMBL:FP565525 Ensembl:ENSSSCT00000031754
Uniprot:I3LHR3
Length = 777
Score = 206 (77.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 62/212 (29%), Positives = 100/212 (47%)
Query: 878 TSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF 937
TS + A T +N+ P P + YT FY L + D+ +Y W S N +R
Sbjct: 316 TSKVLALLNTANNLVHP-P----LIPYTDFYNSTLDHI-DLMEEYHTWQSFG-NSHSRFS 368
Query: 938 LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIV 997
C YPF+ AK +++ D QM Q+ + P +L ++V R ++V
Sbjct: 369 FCQYPFVISIAAKKIIIQRDSEQQMISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLV 428
Query: 998 EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
D++ EL + D KK LKV F GE D GG+ +E+ +LL+++I
Sbjct: 429 SDSLDELTRKRA-DLKKKLKVT------------FVGEAGLDMGGLTKEWFLLLIRQIFH 475
Query: 1058 PKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
P YGMF ++++ WFS ++ + + L+G
Sbjct: 476 PDYGMFTYHKDSYCHWFSSFKCDNYSEFRLVG 507
>ZFIN|ZDB-GENE-041114-190 [details] [associations]
symbol:ube3a "ubiquitin protein ligase E3A"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0030521 "androgen receptor signaling
pathway" evidence=IBA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0016874 "ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
ZFIN:ZDB-GENE-041114-190 GO:GO:0005634 GO:GO:0005737 GO:GO:0030521
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 CTD:7337
HOVERGEN:HBG059326 KO:K10587 InterPro:IPR017134 PIRSF:PIRSF037201
HOGENOM:HOG000261634 EMBL:BC085646 IPI:IPI00769990
RefSeq:NP_001007319.1 UniGene:Dr.37442 ProteinModelPortal:Q5U398
SMR:Q5U398 STRING:Q5U398 PRIDE:Q5U398 GeneID:792398 KEGG:dre:792398
InParanoid:Q5U398 NextBio:20931032 Bgee:Q5U398 Uniprot:Q5U398
Length = 857
Score = 206 (77.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 51/148 (34%), Positives = 76/148 (51%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 463 PFILNAVTKNLGLYYDNRIRMYSERRITALYSLVQG---QQLNPYLRLKVRRDHIIDDAL 519
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 520 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 570
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E T+ WF+ +FE++ + LIG
Sbjct: 571 MFTYDESTKLFWFNPSSFENEGQFTLIG 598
Score = 182 (69.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 36/95 (37%), Positives = 63/95 (66%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE++ LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 570 GMFTYDESTKLFWFNPSSFENEGQFTLIGIVLGLAIYNNCILDVHFPMVIYRKLMGKKGT 629
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+D+++Y E ++E+ ITF+
Sbjct: 630 FRDLADSHPVLFQSLKDLMEY-EGNVEEDMMITFQ 663
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 63/226 (27%), Positives = 110/226 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L+ G+VF+WGG HGQLG + + + + P+ ++ L + + + AG
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAERE--PRVLEALQGLPMAEVAAG----- 224
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL--ESADKKSQSIPKRVKGLAS--VSVV 118
G WHS+ +++ G+++ WG + GQL L S + ++I GL
Sbjct: 225 ------G-WHSVCVSETGDIYIWGWNESGQLALPARSLAEDGKTITGDAPGLNEDGSEAK 277
Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
+A G + + GSD V+++ HT + + GELYTWG
Sbjct: 278 RATEGEDGGPTPFIAVQPFPALLDLPLGSD---AVKASC-GSRHTAVVTRT--GELYTWG 331
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFVLS 222
+YGQ+G + T++ +P RVE V+ L + ++CG +++V +
Sbjct: 332 WGKYGQLG-HKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWNTYVFA 376
>RGD|1306361 [details] [associations]
symbol:Ube3a "ubiquitin protein ligase E3A" species:10116
"Rattus norvegicus" [GO:0001541 "ovarian follicle development"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IBA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0030521 "androgen
receptor signaling pathway" evidence=ISO;IBA] [GO:0035037 "sperm
entry" evidence=ISO] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0060736 "prostate gland
growth" evidence=ISO] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISO] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 RGD:1306361 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 GO:GO:0030521 GO:GO:0045944
GO:GO:0014068 GO:GO:0003713 GO:GO:0001541 GO:GO:0004842
GO:GO:0060736 GO:GO:0070936 GO:GO:0042787 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:NEPLNDV GO:GO:0035037
InterPro:IPR017134 PIRSF:PIRSF037201 IPI:IPI00365749 PRIDE:F1M7B8
Ensembl:ENSRNOT00000021366 Uniprot:F1M7B8
Length = 904
Score = 205 (77.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 52/148 (35%), Positives = 75/148 (50%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 510 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 566
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 567 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 617
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E TR WF+ +FE + + LIG
Sbjct: 618 MFTYDEATRLFWFNPSSFETEGQFTLIG 645
Score = 182 (69.1 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 39/95 (41%), Positives = 61/95 (64%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E TR WF+ +FE + LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 617 GMFTYDEATRLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 676
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
DL D P L +SL+D+L+Y E ++ED ITF+
Sbjct: 677 FCDLGDSHPILYQSLKDLLEY-EGNVEDDMMITFQ 710
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 142 (55.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 49/178 (27%), Positives = 87/178 (48%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
G H+L L+ G+VF+WGG HGQLG + + + + P+ ++ L + + + AG H +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE--PRLLEALQGLVMAEVAAGGWHSV 223
Query: 129 VLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS-LNSPG-ELYTWGNNEYGQM 185
++ +G + E+G + P++ NL +D T LN G ++ G E G
Sbjct: 224 CVSETGDIYIWGWNESGQLALPTR----NLAEDGETVAREELNEDGSQVKRTGGAEDG-- 277
Query: 186 GINNSNTTVTKPQRVESLVNLPIALIA----CGANHSFVLSKSVSRLYAFGIGSAVQL 239
+ Q +L++LP+ A CG+ H+ V++++ LY +G G QL
Sbjct: 278 ----APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRT-GELYTWGWGKYGQL 330
Score = 137 (53.3 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 30/93 (32%), Positives = 52/93 (55%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L+ G+VF+WGG HGQLG + + + + P+ ++ L + + + AG
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE--PRLLEALQGLVMAEVAAG----- 218
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
G WHS+ +++ G+++ WG + GQL L
Sbjct: 219 ------G-WHSVCVSETGDIYIWGWNESGQLAL 244
Score = 111 (44.1 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSF 219
HT + + GELYTWG +YGQ+G + T++ +P+RVE V+ L + + CG +++
Sbjct: 309 HTAVVTRT--GELYTWGWGKYGQLG-HEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTY 365
Query: 220 V 220
V
Sbjct: 366 V 366
>UNIPROTKB|F1SNS1 [details] [associations]
symbol:UBE3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0060736 "prostate gland growth" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035037 "sperm entry"
evidence=IEA] [GO:0030521 "androgen receptor signaling pathway"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 GO:GO:0005829 GO:GO:0005634 GO:GO:0030521
GO:GO:0045944 GO:GO:0014068 GO:GO:0003713 GO:GO:0001541
GO:GO:0006511 GO:GO:0004842 GO:GO:0060736 GO:GO:0070936
SUPFAM:SSF56204 GeneTree:ENSGT00660000095216 OMA:NEPLNDV
GO:GO:0035037 InterPro:IPR017134 PIRSF:PIRSF037201 EMBL:CU856472
UniGene:Ssc.96995 Ensembl:ENSSSCT00000005334 ArrayExpress:F1SNS1
Uniprot:F1SNS1
Length = 853
Score = 203 (76.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 51/148 (34%), Positives = 75/148 (50%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 459 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 515
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 516 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 566
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E T+ WF+ +FE + + LIG
Sbjct: 567 MFTYDESTKLFWFNPSSFETEGQFTLIG 594
Score = 183 (69.5 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 38/95 (40%), Positives = 61/95 (64%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 566 GMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 625
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+D+L+Y E +ED ITF+
Sbjct: 626 FRDLGDSHPVLYQSLKDLLEY-EGSVEDDMMITFQ 659
>UNIPROTKB|F1PBV3 [details] [associations]
symbol:UBE3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:NEPLNDV InterPro:IPR017134
PIRSF:PIRSF037201 EMBL:AAEX03002190 EMBL:AAEX03002191
Ensembl:ENSCAFT00000016065 Uniprot:F1PBV3
Length = 870
Score = 203 (76.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/148 (34%), Positives = 75/148 (50%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 476 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 532
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 533 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 583
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E T+ WF+ +FE + + LIG
Sbjct: 584 MFTYDESTKLFWFNPSSFETEGQFTLIG 611
Score = 184 (69.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 38/95 (40%), Positives = 62/95 (65%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 583 GMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 642
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+D+L+Y E ++ED ITF+
Sbjct: 643 FRDLGDSHPVLYQSLKDLLEY-EGNVEDDMMITFQ 676
>UNIPROTKB|Q05086 [details] [associations]
symbol:UBE3A "Ubiquitin-protein ligase E3A" species:9606
"Homo sapiens" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001541
"ovarian follicle development" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0035037
"sperm entry" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060736 "prostate gland growth" evidence=IEA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0070936
"protein K48-linked ubiquitination" evidence=IDA] [GO:0006508
"proteolysis" evidence=TAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0007420 "brain
development" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 Reactome:REACT_6900
Pathway_Interaction_DB:telomerasepathway GO:GO:0019048
GO:GO:0007420 GO:GO:0030521 GO:GO:0045944 GO:GO:0014068
GO:GO:0003713 GO:GO:0001541 GO:GO:0000502 GO:GO:0004842
Pathway_Interaction_DB:ar_pathway GO:GO:0060736 GO:GO:0070936
GO:GO:0042787 MIM:105830 Orphanet:72 SUPFAM:SSF56204 eggNOG:COG5021
EMBL:CH471151 PDB:1C4Z PDBsum:1C4Z EMBL:X98021 EMBL:X98027
EMBL:X98022 EMBL:X98023 EMBL:X98024 EMBL:X98025 EMBL:X98026
EMBL:X98028 EMBL:X98029 EMBL:X98030 EMBL:X98031 EMBL:X98032
EMBL:X98033 EMBL:AC100774 EMBL:AK292514 EMBL:AC124997 EMBL:L07557
EMBL:AF016708 EMBL:AF016703 EMBL:AF016704 EMBL:AF016705
EMBL:AF016706 EMBL:AF016707 EMBL:U84404 EMBL:AJ001107 EMBL:AJ001108
EMBL:AJ001109 EMBL:AJ001110 EMBL:AJ001111 EMBL:AJ001112
IPI:IPI00011609 IPI:IPI00219197 IPI:IPI00219198 RefSeq:NP_000453.2
RefSeq:NP_570853.1 RefSeq:NP_570854.1 UniGene:Hs.598862 PDB:1D5F
PDB:1EQX PDB:2KR1 PDBsum:1D5F PDBsum:1EQX PDBsum:2KR1
ProteinModelPortal:Q05086 SMR:Q05086 DIP:DIP-6002N IntAct:Q05086
MINT:MINT-147444 STRING:Q05086 PhosphoSite:Q05086 DMDM:215274240
PaxDb:Q05086 PRIDE:Q05086 DNASU:7337 Ensembl:ENST00000232165
Ensembl:ENST00000397954 Ensembl:ENST00000428984
Ensembl:ENST00000438097 Ensembl:ENST00000566215 GeneID:7337
KEGG:hsa:7337 UCSC:uc001zaq.3 UCSC:uc001zas.3 CTD:7337
GeneCards:GC15M025582 HGNC:HGNC:12496 HPA:HPA039410 MIM:601623
neXtProt:NX_Q05086 Orphanet:98794 PharmGKB:PA37144
HOVERGEN:HBG059326 InParanoid:Q05086 KO:K10587 OMA:NEPLNDV
ChiTaRS:UBE3A EvolutionaryTrace:Q05086 GenomeRNAi:7337
NextBio:28722 ArrayExpress:Q05086 Bgee:Q05086 Genevestigator:Q05086
GermOnline:ENSG00000114062 GO:GO:0035037 InterPro:IPR017134
PIRSF:PIRSF037201 Uniprot:Q05086
Length = 875
Score = 203 (76.5 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 51/148 (34%), Positives = 75/148 (50%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 481 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 537
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 538 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 588
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E T+ WF+ +FE + + LIG
Sbjct: 589 MFTYDESTKLFWFNPSSFETEGQFTLIG 616
Score = 184 (69.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 38/95 (40%), Positives = 62/95 (65%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 588 GMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 647
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+D+L+Y E ++ED ITF+
Sbjct: 648 FRDLGDSHPVLYQSLKDLLEY-EGNVEDDMMITFQ 681
>UNIPROTKB|A4IFN7 [details] [associations]
symbol:UBE3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0060736 "prostate gland growth" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035037 "sperm entry"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 GO:GO:0005829 GO:GO:0005634 GO:GO:0005737
GO:GO:0030521 GO:GO:0045944 GO:GO:0014068 GO:GO:0003713
GO:GO:0001541 GO:GO:0004842 GO:GO:0060736 GO:GO:0070936
GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:7337 HOVERGEN:HBG059326 KO:K10587
OMA:NEPLNDV GO:GO:0035037 InterPro:IPR017134 PIRSF:PIRSF037201
HOGENOM:HOG000261634 EMBL:DAAA02051638 EMBL:BC134678
IPI:IPI00693985 RefSeq:NP_001091932.1 UniGene:Bt.1350 SMR:A4IFN7
STRING:A4IFN7 Ensembl:ENSBTAT00000049743 GeneID:533136
KEGG:bta:533136 InParanoid:A4IFN7 OrthoDB:EOG40P463
NextBio:20875927 Uniprot:A4IFN7
Length = 875
Score = 203 (76.5 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 51/148 (34%), Positives = 75/148 (50%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 481 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 537
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 538 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 588
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E T+ WF+ +FE + + LIG
Sbjct: 589 MFTYDESTKLFWFNPSSFETEGQFTLIG 616
Score = 181 (68.8 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 38/95 (40%), Positives = 61/95 (64%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 588 GMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 647
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
DL D P L +SL+D+L+Y E ++ED ITF+
Sbjct: 648 FLDLGDSHPVLYQSLKDLLEY-EGNVEDDMMITFQ 681
>UNIPROTKB|F1NER6 [details] [associations]
symbol:UBE3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001541 "ovarian follicle development" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0030521
"androgen receptor signaling pathway" evidence=IEA] [GO:0035037
"sperm entry" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060736 "prostate gland growth" evidence=IEA] [GO:0070936
"protein K48-linked ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 GO:GO:0005829
GO:GO:0005634 GO:GO:0030521 GO:GO:0045944 GO:GO:0014068
GO:GO:0003713 GO:GO:0006511 GO:GO:0004842 GO:GO:0070936
SUPFAM:SSF56204 GeneTree:ENSGT00660000095216 OMA:NEPLNDV
GO:GO:0035037 InterPro:IPR017134 PIRSF:PIRSF037201
EMBL:AADN02017680 EMBL:AADN02017681 IPI:IPI00575849
Ensembl:ENSGALT00000027040 Uniprot:F1NER6
Length = 883
Score = 203 (76.5 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 51/148 (34%), Positives = 75/148 (50%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 489 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 545
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 546 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 596
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E T+ WF+ +FE + + LIG
Sbjct: 597 MFTYDESTKLFWFNPSSFETEGQFTLIG 624
Score = 184 (69.8 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 38/95 (40%), Positives = 61/95 (64%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 596 GMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 655
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+D+L+Y E +ED ITF+
Sbjct: 656 FRDLADSHPVLYQSLRDLLEY-EGSVEDDMMITFQ 689
>UNIPROTKB|F1PT35 [details] [associations]
symbol:HECTD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:ICLDVRQ EMBL:AAEX03015407
Ensembl:ENSCAFT00000011650 Uniprot:F1PT35
Length = 645
Score = 201 (75.8 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
+ YT FY L + D+ +Y W S S R C YPF+ AK +++ D Q
Sbjct: 204 IPYTDFYNSTLDHI-DLMEEYHTWQSF--GNSHRFSFCQYPFVISIAAKKIIIQRDSEQQ 260
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 261 MISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 317
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 318 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDN 367
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 368 YSEFRLVG 375
Score = 125 (49.1 bits), Expect = 0.00058, P = 0.00058
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L PI
Sbjct: 346 YGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPI 405
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ DL + P LA L ++L Y E ++E+ F TF+
Sbjct: 406 IPSDQNIPVGICSVTTDDLCQIMPELAHGLSELLSY-EGNVEEDFYSTFQ 454
>MGI|MGI:2442663 [details] [associations]
symbol:Hectd2 "HECT domain containing 2" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 MGI:MGI:2442663
GO:GO:0005634 GO:GO:0005737 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 CTD:143279 HOVERGEN:HBG081596
KO:K12232 EMBL:AK029549 EMBL:AK035511 EMBL:AC113514 EMBL:AC119947
IPI:IPI00228942 RefSeq:NP_001156943.1 RefSeq:NP_766225.2
UniGene:Mm.61107 ProteinModelPortal:Q8CDU6 SMR:Q8CDU6
PhosphoSite:Q8CDU6 PRIDE:Q8CDU6 Ensembl:ENSMUST00000047247
GeneID:226098 KEGG:mmu:226098 GeneTree:ENSGT00660000095216
InParanoid:Q8CDU6 OrthoDB:EOG4B8JCJ NextBio:377980 Bgee:Q8CDU6
CleanEx:MM_HECTD2 Genevestigator:Q8CDU6
GermOnline:ENSMUSG00000041180 Uniprot:Q8CDU6
Length = 774
Score = 202 (76.2 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 56/188 (29%), Positives = 89/188 (47%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
V YT FY L + D+ +Y W S S R C YPF+ AK +++ D Q
Sbjct: 333 VPYTDFYNSTLDHI-DLMEEYHTWQSF--GNSHRFSFCQYPFVISIAAKKIIIQRDSEQQ 389
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 390 MISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 446
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 447 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDN 496
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 497 YSEFRLVG 504
Score = 126 (49.4 bits), Expect = 0.00058, P = 0.00058
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L P+
Sbjct: 475 YGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPV 534
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ + DL + P LA L+++L Y E ++E+ F TF+
Sbjct: 535 VPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSY-EGNVEEDFYSTFQ 583
>UNIPROTKB|Q6NVK6 [details] [associations]
symbol:ube3a "Ubiquitin protein ligase E3A (Human papilloma
virus E6-associated protein, Angelman syndrome)" species:8364
"Xenopus (Silurana) tropicalis" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0030521 "androgen
receptor signaling pathway" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
GO:GO:0030521 GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 CTD:7337 HOVERGEN:HBG059326 KO:K10587
InterPro:IPR017134 PIRSF:PIRSF037201 HOGENOM:HOG000261634
OrthoDB:EOG40P463 EMBL:BC067999 RefSeq:NP_001001213.1
UniGene:Str.14960 ProteinModelPortal:Q6NVK6 SMR:Q6NVK6
STRING:Q6NVK6 GeneID:407881 KEGG:xtr:407881 Xenbase:XB-GENE-948557
InParanoid:Q6NVK6 Bgee:Q6NVK6 Uniprot:Q6NVK6
Length = 856
Score = 202 (76.2 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 51/148 (34%), Positives = 75/148 (50%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 462 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 518
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 519 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 569
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E T+ WF+ +FE + + LIG
Sbjct: 570 MFTYDESTKHSWFNPSSFETEGQFTLIG 597
Score = 173 (66.0 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 35/95 (36%), Positives = 62/95 (65%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 569 GMFTYDESTKHSWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 628
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+++L+Y E ++E+ +TF+
Sbjct: 629 FRDLADSHPVLYQSLKELLEY-EGNVEEDMMMTFQ 662
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 195 (73.7 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 62/226 (27%), Positives = 106/226 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H L L G+VF+WG HGQLG + + + + P+ ++ L + + + AG
Sbjct: 169 GAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELE--PRLLEALQGLRMAKVAAG----- 221
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQL------GLESADKKSQSIPKRVKGLASVS 116
G WHS+ L++ G+++ WG + GQL G E+ ++ ++ GL
Sbjct: 222 ------G-WHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEEL 274
Query: 117 VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYT 176
V +H + + + + GSD V ++ HT + + GELYT
Sbjct: 275 AVADAGAPAHFIAIQPFPALL----DLPLGSD---AVMASC-GSRHTAVVTRT--GELYT 324
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFV 220
WG +YGQ+G +S T++ +P VE V L + + CG +++V
Sbjct: 325 WGWGKYGQLGHKDS-TSLDRPCCVEYFVERQLEVRAVTCGPWNTYV 369
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
G H L L G+VF+WG HGQLG + + + + P+ ++ L + + + AG H +
Sbjct: 169 GAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELE--PRLLEALQGLRMAKVAAGGWHSV 226
Query: 129 VLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
L+ +G + E+G + P++ N + T LN G + G
Sbjct: 227 CLSETGDIYIWGWNESGQLALPTRSGTENKAEREEAT--ELNEDGLKEELAVADAGAP-- 282
Query: 188 NNSNTTVTKPQRVESLVNLPI---ALIA-CGANHSFVLSKSVSRLYAFGIGSAVQL 239
++ +P +L++LP+ A++A CG+ H+ V++++ LY +G G QL
Sbjct: 283 --AHFIAIQP--FPALLDLPLGSDAVMASCGSRHTAVVTRT-GELYTWGWGKYGQL 333
>UNIPROTKB|F1NGR4 [details] [associations]
symbol:HECTD2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:ICLDVRQ EMBL:AADN02027718
EMBL:AADN02027719 EMBL:AADN02027720 EMBL:AADN02027721
EMBL:AADN02027722 IPI:IPI00579042 Ensembl:ENSGALT00000002758
Uniprot:F1NGR4
Length = 778
Score = 201 (75.8 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 55/189 (29%), Positives = 92/189 (48%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRI 960
++YT FY L + D+ +Y W + G++ F C +PFI AK +++ D
Sbjct: 337 ISYTDFYNSTLDHI-DLMEEYHNW---QCYGNSHRFSFCQHPFIISIAAKKVIIQRDSEQ 392
Query: 961 QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND 1020
QM Q+ + P +L V+V R ++V D++ EL + D KK LKV
Sbjct: 393 QMISIARQSLVDKVSRRQKPDMNMLFLNVKVRRTHLVSDSLDELTRKRA-DLKKKLKVT- 450
Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE 1080
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS +
Sbjct: 451 -----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCD 499
Query: 1081 DQNMYFLIG 1089
+ + + L+G
Sbjct: 500 NYSEFRLVG 508
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L PI
Sbjct: 479 YGMFTYHKDSHCHWFSSFKCDNYSEFRLVGALMGLAVYNSITLDIRFPPCCYKKLLSPPI 538
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ L DL + P LA L ++L Y E ++E+ F TF+
Sbjct: 539 VPCDHNTLVGICDVTLDDLFQIMPELAHGLSELLSY-EGNVEEDFYSTFQ 587
>MGI|MGI:105098 [details] [associations]
symbol:Ube3a "ubiquitin protein ligase E3A" species:10090
"Mus musculus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0030521 "androgen receptor signaling
pathway" evidence=IPI] [GO:0035037 "sperm entry" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0060736 "prostate gland growth" evidence=IMP]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISO]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:105098 EMBL:U96636 GO:GO:0005829
GO:GO:0005634 GO:GO:0030521 GO:GO:0045944 GO:GO:0014068
GO:GO:0003713 GO:GO:0001541 GO:GO:0000502 GO:GO:0004842
GO:GO:0060736 GO:GO:0070936 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG059326 ChiTaRS:UBE3A GO:GO:0035037
InterPro:IPR017134 PIRSF:PIRSF037201 EMBL:U82122 IPI:IPI00115595
UniGene:Mm.9002 ProteinModelPortal:O08759 SMR:O08759 STRING:O08759
PhosphoSite:O08759 PaxDb:O08759 PRIDE:O08759 HOGENOM:HOG000261634
CleanEx:MM_UBE3A Genevestigator:O08759 Uniprot:O08759
Length = 885
Score = 201 (75.8 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 51/148 (34%), Positives = 75/148 (50%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 492 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLTLKVRRDHIIDDAL 548
Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
L + P + +Y V+F GE+ D GGV +EF L+++EI +P G
Sbjct: 549 VRLEMIA---MENPADLK--KQLY----VEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIG 599
Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
MF E T+ WF+ +FE + + LIG
Sbjct: 600 MFTYDEATKLFWFNPSSFETEGQFTLIG 627
Score = 178 (67.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/95 (41%), Positives = 61/95 (64%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG L GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 599 GMFTYDEATKLFWFNPSSFETEGQFTLIGIL-GLAIYNNCILDVHFPMVVYRKLMGKKGT 657
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+D+L+Y E +ED ITF+
Sbjct: 658 FRDLGDSHPVLYQSLKDLLEY-EGSVEDDMMITFQ 691
>UNIPROTKB|F1N7A0 [details] [associations]
symbol:HECTD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 GO:GO:0016567
GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204 CTD:143279 KO:K12232
GeneTree:ENSGT00660000095216 OMA:ICLDVRQ EMBL:DAAA02058794
EMBL:DAAA02058795 IPI:IPI00688766 RefSeq:NP_001193701.1
UniGene:Bt.51714 Ensembl:ENSBTAT00000015476 GeneID:520752
KEGG:bta:520752 NextBio:20873174 Uniprot:F1N7A0
Length = 775
Score = 199 (75.1 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
+ YT FY L + D+ +Y W S S R C YPF+ AK +++ D Q
Sbjct: 334 IPYTDFYNSTLDHI-DLMEEYHTWQSF--GNSHRFSFCQYPFVISIAAKKIIIQRDSEQQ 390
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 391 MISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 447
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 448 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSYCHWFSSFKCDN 497
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 498 YSEFRLVG 505
>ASPGD|ASPL0000060082 [details] [associations]
symbol:hulB species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0032153 "cell division site" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:BN001308
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
HOGENOM:HOG000208451 EnsemblFungi:CADANIAT00002251 OMA:CGGNALS
Uniprot:C8VT87
Length = 1090
Score = 217 (81.4 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 892 RTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKT 951
R H G + ++FY L + D+ W S +T+ C YPF AK
Sbjct: 640 RQQGAHRGHIIPISSFYNTRLDYSNLVVADFEAWESR----TTKFSFCQYPFFLSIGAKI 695
Query: 952 TLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---T 1008
+LE D R QME + F L ++QY + V R+ +VED+++ +++ +
Sbjct: 696 QILEHDARRQMEVKAREAFFSSILTR---KAVSQYFVLRVRRECLVEDSLQRVSEVLGSS 752
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
+ KK L++ F GEE DAGG+R+E+ +LL++E+ DP +G+F E+
Sbjct: 753 PEEMKKGLRIG------------FVGEEGVDAGGLRKEWFLLLVREVFDPHHGLFIYDED 800
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+R +F+ E +FL+G
Sbjct: 801 SRYCYFNPYCLESSEQFFLVG 821
Score = 145 (56.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
H+G+ Y+E +R +F+ E FL+G + GLAIYN I+++ P +KK+L
Sbjct: 791 HHGLFIYDEDSRYCYFNPYCLESSEQFFLVGVVLGLAIYNSIILDIALPPFAFKKLLAGA 850
Query: 775 -----DEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+P+ QDL + P LA+ L+ +L++ E D+ + F TF
Sbjct: 851 PQTTGPQPLTTQDLAEYRPVLARGLRALLEF-EGDVAETFCHTF 893
Score = 43 (20.2 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 22/108 (20%), Positives = 46/108 (42%)
Query: 259 SPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVN 318
+P ++ + E S + SG I+ + I++ K D L+ F + A + N
Sbjct: 296 APNSVNSRERSRLRESGKEKHPYIFRELEDYIISGLKGCD-TLNVSFNSAHHAPRATPEN 354
Query: 319 FERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVEND 366
+ ++ ER + + D ++ D +T+ + N S+ V+ D
Sbjct: 355 SQPERDVERNPRRAQVDTAVELDA----KTLLVGDLVENSSWWMVDED 398
Score = 41 (19.5 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGV---VDSTNGD 852
+W+ S +FE+L+ + + + Y L + V +S N D
Sbjct: 521 SWFSRFSVGHFEKLVELVGRFVTYRLSRQHVRRKSESANDD 561
>UNIPROTKB|Q5BG86 [details] [associations]
symbol:AN0444.2 "Putative uncharacterized protein"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 GO:GO:0005634
GO:GO:0005737 EMBL:AACD01000007 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF56204 KO:K12232 OrthoDB:EOG42Z7Z7 RefSeq:XP_658048.1
ProteinModelPortal:Q5BG86 GeneID:2876222 KEGG:ani:AN0444.2
Uniprot:Q5BG86
Length = 1165
Score = 217 (81.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 892 RTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKT 951
R H G + ++FY L + D+ W S +T+ C YPF AK
Sbjct: 707 RQQGAHRGHIIPISSFYNTRLDYSNLVVADFEAWESR----TTKFSFCQYPFFLSIGAKI 762
Query: 952 TLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---T 1008
+LE D R QME + F L ++QY + V R+ +VED+++ +++ +
Sbjct: 763 QILEHDARRQMEVKAREAFFSSILTR---KAVSQYFVLRVRRECLVEDSLQRVSEVLGSS 819
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
+ KK L++ F GEE DAGG+R+E+ +LL++E+ DP +G+F E+
Sbjct: 820 PEEMKKGLRIG------------FVGEEGVDAGGLRKEWFLLLVREVFDPHHGLFIYDED 867
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
+R +F+ E +FL+G
Sbjct: 868 SRYCYFNPYCLESSEQFFLVG 888
Score = 43 (20.2 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 22/108 (20%), Positives = 46/108 (42%)
Query: 259 SPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVN 318
+P ++ + E S + SG I+ + I++ K D L+ F + A + N
Sbjct: 292 APNSVNSRERSRLRESGKEKHPYIFRELEDYIISGLKGCD-TLNVSFNSAHHAPRATPEN 350
Query: 319 FERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVEND 366
+ ++ ER + + D ++ D +T+ + N S+ V+ D
Sbjct: 351 SQPERDVERNPRRAQVDTAVELDA----KTLLVGDLVENSSWWMVDED 394
Score = 41 (19.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGV---VDSTNGD 852
+W+ S +FE+L+ + + + Y L + V +S N D
Sbjct: 588 SWFSRFSVGHFEKLVELVGRFVTYRLSRQHVRRKSESANDD 628
>CGD|CAL0002471 [details] [associations]
symbol:orf19.5892 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
[GO:0031499 "TRAMP complex" evidence=IEA] [GO:0005816 "spindle pole
body" evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 EMBL:AACQ01000003
EMBL:AACQ01000004 SUPFAM:SSF56204 eggNOG:COG5021 KO:K12232
InterPro:IPR005735 TIGRFAMs:TIGR01053 RefSeq:XP_722961.1
RefSeq:XP_723108.1 ProteinModelPortal:Q5ANK9 STRING:Q5ANK9
GeneID:3635180 GeneID:3635376 KEGG:cal:CaO19.13313
KEGG:cal:CaO19.5892 CGD:CAL0071549 Uniprot:Q5ANK9
Length = 894
Score = 211 (79.3 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 48/154 (31%), Positives = 84/154 (54%)
Query: 937 FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL-NQYLEVEVSRDN 995
++C YPF+ AK ++LE + R QME + F+ + + + + Y + V RD+
Sbjct: 492 YICQYPFLISLGAKISVLEYEARRQMERKAEEA----FINSLDKRVIIDVYFRIRVRRDH 547
Query: 996 IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
IV+D+++ + + N KK L+V +F E DAGG+++E+ +LL KEI
Sbjct: 548 IVQDSLQYIKTNSDN-LKKSLRV------------QFANEPGVDAGGLKKEWFLLLTKEI 594
Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
P+ GMF +++ +WF+ E+ +MY+L G
Sbjct: 595 FHPQSGMFHNVDDSNFLWFNIIPVENPDMYYLFG 628
Score = 146 (56.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 33/106 (31%), Positives = 60/106 (56%)
Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
+P++G+ H +++ +WF+ E+ +M +L G + GLAIYN TI+++ FP+ALYK
Sbjct: 596 HPQSGMFH----NVDDSNFLWFNIIPVENPDMYYLFGAILGLAIYNSTILDLQFPIALYK 651
Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
+L + D + L P K+L ++ ++ D+ +TF Y
Sbjct: 652 ILLKRGLDRDDYRKLYPVSYKNLINLKSMSNKEILDL-DLTFEVSY 696
Score = 45 (20.9 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 320 ERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSF-LQVENDE-HFSCNSKKFS 377
E K +LKS + + L YL F S +N SF L+ + H S ++ +S
Sbjct: 128 ECFKNANDNKGKLKSLHEIFEPLSNYLYQAFRSFEILNNSFKLRPHSKRPHHSTSNIYYS 187
Query: 378 FIKLSLINWFMKL 390
++ +IN KL
Sbjct: 188 GVR-DVINLLTKL 199
Score = 40 (19.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGR 929
V + FY L +IR+D+ W S R
Sbjct: 429 VPVSVFYN-SLVDYVNIRLDFDSWQSNR 455
Score = 38 (18.4 bits), Expect = 7.1e-11, Sum P(3) = 7.1e-11
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 34 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
K +P+ +K L S +++ C G C+ T G + S
Sbjct: 255 KLMSDVPE-IKML-SYDILKRCLGILSCIDNAKTLGYFTS 292
>UNIPROTKB|Q873C0 [details] [associations]
symbol:B24N11.040 "Related to ubiquitin-protein ligase
HUL4" species:5141 "Neurospora crassa" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 GO:GO:0005634
GO:GO:0005737 GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208451 OrthoDB:EOG42Z7Z7 HSSP:Q05086
EMBL:BX284751 ProteinModelPortal:Q873C0 Uniprot:Q873C0
Length = 1322
Score = 221 (82.9 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 56/192 (29%), Positives = 99/192 (51%)
Query: 901 KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI 960
++ T+ + L D+ D+ W S + + C +PF+ AK +LE D +
Sbjct: 873 QILATSDFYTTLLDDSDLVADFETWESKKGKFA----FCQFPFLLSIGAKIQILEYDAKR 928
Query: 961 QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKPLK 1017
QME F L + Q+L ++V RD +V+D+++ +++ + D KK LK
Sbjct: 929 QMEDKARDAFFNSIL---THRVIQQHLVLDVRRDCLVDDSLKAVSEVIGSGGEDIKKGLK 985
Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
+N F+GEE DAGG+R+E+ +LL++E+ +P +GMF E+++ +F+
Sbjct: 986 IN------------FKGEEGIDAGGLRKEWFLLLVREVFNPDHGMFVYDEDSQYCYFNPA 1033
Query: 1078 TFEDQNMYFLIG 1089
+ E YFL+G
Sbjct: 1034 SLEPSEQYFLVG 1045
Score = 41 (19.5 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 320 ERLKECEREVEQLKSDETLDQDLLLYLETVFLSPG 354
E LKE E ++ L + + + LL ET+ PG
Sbjct: 641 EALKEIEAQL--LVGQDHVHRSLLRASETIMKRPG 673
Score = 39 (18.8 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 17/81 (20%), Positives = 30/81 (37%)
Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV----VKKIYSGGDHSIVTVTKS 296
S S + Q H W P + +G ++ + + YS G+++ +
Sbjct: 74 SQGSSQRQQQQQHPQWHPHPFPQSHRAFGPPPSAGSIITTNNLNRKYSNGNNNNLNGNSP 133
Query: 297 SDGVLSDDFRVLNPATQILDV 317
G LS + V P T + V
Sbjct: 134 GSGNLSSNVSVNRPPTANVQV 154
>UNIPROTKB|E7ERR3 [details] [associations]
symbol:HECTD2 "Probable E3 ubiquitin-protein ligase HECTD2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
EMBL:AL161798 EMBL:AC023902 HGNC:HGNC:26736 IPI:IPI00940836
ProteinModelPortal:E7ERR3 SMR:E7ERR3 Ensembl:ENST00000446394
UCSC:uc010qnm.1 OMA:ICLDVRQ ArrayExpress:E7ERR3 Bgee:E7ERR3
Uniprot:E7ERR3
Length = 780
Score = 200 (75.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
+ YT FY L + D+ +Y W + S R C YPF+ AK +++ D Q
Sbjct: 339 IPYTDFYNSTLDHI-DLMEEYHTWQNF--GNSHRFSFCQYPFVISVAAKKIIIQRDSEQQ 395
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M + Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 396 MINIARQSLVDKVSRRQRPDMNILFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 452
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 453 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDN 502
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 503 YSEFRLVG 510
Score = 47 (21.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 20/92 (21%), Positives = 40/92 (43%)
Query: 736 DTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQ 795
D+F + N F + IN F A+Y +L+ P +D+ T+ K +
Sbjct: 160 DSFPELNAAFKKDATASFNTIEDSGINAKFVNAVYDTLLNTP------QDVQKTVLKGII 213
Query: 796 DIL--DYREPDLEDVFGITFRNWYLLMSDDYF 825
+ L +++ P +D R +++L+ + F
Sbjct: 214 NSLLREWKGPRTKD----DLRAYFILLQNPQF 241
Score = 43 (20.2 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 314 ILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNS 373
IL + + +K+ + +VE++KS YL T P +N +F + D S N+
Sbjct: 124 ILPIQPKTVKDFQEDVEKVKSSGDWKAVHDFYLTTFDSFPE-LNAAF---KKDATASFNT 179
Query: 374 KKFSFIKLSLIN 385
+ S I +N
Sbjct: 180 IEDSGINAKFVN 191
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 193 (73.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 64/191 (33%), Positives = 93/191 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLAL GEVF WG + GQ+G S +Q P++V V+ A C
Sbjct: 136 GSHHSLALTHEGEVFAWGYNNCGQVG--SGSTANQPTPRKVSNCLQNKVIVNIA----C- 188
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G S+A+ D GEV+ WG + +GQLGL + +Q P R+ L V+Q +
Sbjct: 189 ------GQTSSMAVTDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRLIALQGFCVLQIAS 240
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGSDPSQ--GVQ-----SNLVQDS--HTTITSL- 168
GY+H L LT G++ T+ + G G+ +Q VQ +V+ + H+T TS
Sbjct: 241 GYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSAA 300
Query: 169 -NSPGELYTWG 178
G++Y WG
Sbjct: 301 KTQSGQVYMWG 311
Score = 183 (69.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 67/258 (25%), Positives = 112/258 (43%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + + GE++ WG + + QLG + ++ G++ + V G V
Sbjct: 86 HVLLVTEDGELYAWGHNGYSQLGNGTTNQ----------GVSPILVSTNLQGKR---VTE 132
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGY 124
+ G HSLAL GEVF WG + GQ+G S +Q P++V L + +V G
Sbjct: 133 VSCGSHHSLALTHEGEVFAWGYNNCGQVG--SGSTANQPTPRKVSNCLQNKVIVNIACGQ 190
Query: 125 SHCLVLTSSG-VVTCTHKENG---CGSDPSQGVQSNLVQ----------DSHTTITSLNS 170
+ + +T +G V + NG G++ +Q L+ + +L
Sbjct: 191 TSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTD 250
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G LY WG N YGQ+G N + ++ P +V + + + AC + H+ ++Y
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLS-PVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYM 309
Query: 231 FGI--GSAVQLDSPKSVH 246
+G G A+ L P H
Sbjct: 310 WGQCRGQAIVL--PHLTH 325
Score = 163 (62.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
EV+ G + LG + D +S PK++ L+ ++ G +G H L
Sbjct: 42 EVYVLGLNCSNCLG--TGDSQSTIAPKKLDCLSGKKLISLSYG----------SGP-HVL 88
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
+ + GE++ WG + + QLG + ++ I L V + G H L LT G
Sbjct: 89 LVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTN-LQGKRVTEVSCGSHHSLALTHEG 147
Query: 135 VVTCTHKEN----GCGSDPSQGVQ---SNLVQDS--------HTTITSLNSPGELYTWGN 179
V N G GS +Q SN +Q+ T+ ++ GE+Y WG
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGY 207
Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
N GQ+G+ N+ +T P R+ +L + IA G HS L+ LYA+G + QL
Sbjct: 208 NGNGQLGLGNNGNQLT-PCRLIALQGFCVLQIASGYAHSLALTDE-GLLYAWGANTYGQL 265
Query: 240 DSP-KSVHKTP 249
+ KS +P
Sbjct: 266 GTGNKSNQLSP 276
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 190 (71.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 81/305 (26%), Positives = 137/305 (44%)
Query: 2 TGLWHSLAL---NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 58
TG H+LA+ ++ V WG ++ GQ+G + A + S P ++ G +V Q AG
Sbjct: 90 TGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGG-AVQQVAAG- 147
Query: 59 SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSV 117
GL HS+AL G V+ WG ++ GQL L ++ P++V+ ++
Sbjct: 148 ----------GL-HSMALAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAP 195
Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGC---GSDPSQGVQSNLVQDSHTTIT-------- 166
AG SH + TS+ + +G G+ S + + S TI
Sbjct: 196 TAIVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSH 255
Query: 167 --SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL-IACGANHSFVLSK 223
+L+S G ++ WG+N YGQ+G N + T + P ++ + + + G +HS ++
Sbjct: 256 NLALDSTGAIWAWGSNAYGQLG-NGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVAS 314
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWI--ASPVAMTAGEDSLVSHSGGLVVKK 281
+ + +Y +G + L SV T + + AS V T E ++ S +VKK
Sbjct: 315 NFT-VYTWGFNTLGLL----SVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKK 369
Query: 282 IYSGG 286
SGG
Sbjct: 370 NGSGG 374
Score = 188 (71.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 89/346 (25%), Positives = 152/346 (43%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVL 64
HS + + WG + GQLG S + PKR++ G A+ S +G++
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLG--DGTTTSAATPKRLRLGFATYS-----SGFA----- 89
Query: 65 TSTTGLWHSLAL---NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
TG H+LA+ ++ V WG ++ GQ+G + A + S P ++ G +V Q
Sbjct: 90 ---TGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGG-AVQQVA 145
Query: 122 AGYSHCLVLT----------SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP 171
AG H + L S+G + + P Q V++ + + T I + S
Sbjct: 146 AGGLHSMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQ-VETAKLPIAPTAIVAGGSH 204
Query: 172 G------ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
E Y WGNN GQ+G N + + PQ+V+ ++ I I+ G +H+ L S
Sbjct: 205 SIAYTSTEAYAWGNNASGQLG-NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALD-ST 262
Query: 226 SRLYAFGIGSAVQLDSPKSVHK-TP-QLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
++A+G + QL + + ++ TP QL + + + AG V+ + V Y
Sbjct: 263 GAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTV---Y 319
Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREV 329
+ G +++ + S G D L+PA Q+ D + + ER V
Sbjct: 320 TWGFNTLGLL---SVGTTGDQ---LSPA-QVRDASNVPFTDVERVV 358
Score = 150 (57.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 55/202 (27%), Positives = 90/202 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+A E + WG + GQLG + S +P++V+ +S+++ + AG SH L L
Sbjct: 204 HSIAYTST-EAYAWGNNASGQLG--NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALD 260
Query: 66 STTGLWH--SLALNDCGEVFTWGGDTHGQLGLESADKKSQSI---PKRVKGLASVSVVQA 120
ST +W S A G T T QL L + + P +AS V
Sbjct: 261 STGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYT 320
Query: 121 CAGYSHCLVLT--SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G++ +L+ ++G + + P V+ ++ S TI N G ++ WG
Sbjct: 321 W-GFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWG 379
Query: 179 NNEYGQMGINNSNTTVTKPQRV 200
N YGQ+G + + + T P +V
Sbjct: 380 YNGYGQLG-DGTTSNRTAPVQV 400
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 66/234 (28%), Positives = 106/234 (45%)
Query: 46 LASVSVVQACAG----YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKK 101
LAS +++ ACA YS ++S HS + + WG + GQLG
Sbjct: 13 LASCTLLSACADGDLPYSDSTSISSPA-YSHSAVFQNMTTLAVWGNNESGQLG--DGTTT 69
Query: 102 SQSIPKRVK-GLASVSVVQACAGYSHCLVLTS----SGVVTCTHKENG-CGSDPSQ---- 151
S + PKR++ G A+ S A G SH L + SGV G G DP+
Sbjct: 70 SAATPKRLRLGFATYSSGFA-TGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTS 128
Query: 152 -------GVQSNLVQDSHTTITSLN-SPGELYTWGNNEYGQMGINN-SNTTVTKPQRVES 202
G + Q + + S+ + G ++ WG+N GQ+ +N S+ T P++VE+
Sbjct: 129 STPVKIGGFGGAVQQVAAGGLHSMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVET 188
Query: 203 LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV-HKTPQLIHGP 255
LPIA A A S ++ + + YA+G ++ QL + ++ + PQ + P
Sbjct: 189 -AKLPIAPTAIVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLP 241
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 190 (71.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 81/305 (26%), Positives = 137/305 (44%)
Query: 2 TGLWHSLAL---NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 58
TG H+LA+ ++ V WG ++ GQ+G + A + S P ++ G +V Q AG
Sbjct: 90 TGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGG-AVQQVAAG- 147
Query: 59 SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSV 117
GL HS+AL G V+ WG ++ GQL L ++ P++V+ ++
Sbjct: 148 ----------GL-HSMALAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAP 195
Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGC---GSDPSQGVQSNLVQDSHTTIT-------- 166
AG SH + TS+ + +G G+ S + + S TI
Sbjct: 196 TAIVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSH 255
Query: 167 --SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL-IACGANHSFVLSK 223
+L+S G ++ WG+N YGQ+G N + T + P ++ + + + G +HS ++
Sbjct: 256 NLALDSTGAIWAWGSNAYGQLG-NGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVAS 314
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWI--ASPVAMTAGEDSLVSHSGGLVVKK 281
+ + +Y +G + L SV T + + AS V T E ++ S +VKK
Sbjct: 315 NFT-VYTWGFNTLGLL----SVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKK 369
Query: 282 IYSGG 286
SGG
Sbjct: 370 NGSGG 374
Score = 188 (71.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 89/346 (25%), Positives = 152/346 (43%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVL 64
HS + + WG + GQLG S + PKR++ G A+ S +G++
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLG--DGTTTSAATPKRLRLGFATYS-----SGFA----- 89
Query: 65 TSTTGLWHSLAL---NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
TG H+LA+ ++ V WG ++ GQ+G + A + S P ++ G +V Q
Sbjct: 90 ---TGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGG-AVQQVA 145
Query: 122 AGYSHCLVLT----------SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP 171
AG H + L S+G + + P Q V++ + + T I + S
Sbjct: 146 AGGLHSMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQ-VETAKLPIAPTAIVAGGSH 204
Query: 172 G------ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
E Y WGNN GQ+G N + + PQ+V+ ++ I I+ G +H+ L S
Sbjct: 205 SIAYTSTEAYAWGNNASGQLG-NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALD-ST 262
Query: 226 SRLYAFGIGSAVQLDSPKSVHK-TP-QLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
++A+G + QL + + ++ TP QL + + + AG V+ + V Y
Sbjct: 263 GAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTV---Y 319
Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREV 329
+ G +++ + S G D L+PA Q+ D + + ER V
Sbjct: 320 TWGFNTLGLL---SVGTTGDQ---LSPA-QVRDASNVPFTDVERVV 358
Score = 150 (57.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 55/202 (27%), Positives = 90/202 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+A E + WG + GQLG + S +P++V+ +S+++ + AG SH L L
Sbjct: 204 HSIAYTST-EAYAWGNNASGQLG--NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALD 260
Query: 66 STTGLWH--SLALNDCGEVFTWGGDTHGQLGLESADKKSQSI---PKRVKGLASVSVVQA 120
ST +W S A G T T QL L + + P +AS V
Sbjct: 261 STGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYT 320
Query: 121 CAGYSHCLVLT--SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G++ +L+ ++G + + P V+ ++ S TI N G ++ WG
Sbjct: 321 W-GFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWG 379
Query: 179 NNEYGQMGINNSNTTVTKPQRV 200
N YGQ+G + + + T P +V
Sbjct: 380 YNGYGQLG-DGTTSNRTAPVQV 400
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 66/234 (28%), Positives = 106/234 (45%)
Query: 46 LASVSVVQACAG----YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKK 101
LAS +++ ACA YS ++S HS + + WG + GQLG
Sbjct: 13 LASCTLLSACADGDLPYSDSTSISSPA-YSHSAVFQNMTTLAVWGNNESGQLG--DGTTT 69
Query: 102 SQSIPKRVK-GLASVSVVQACAGYSHCLVLTS----SGVVTCTHKENG-CGSDPSQ---- 151
S + PKR++ G A+ S A G SH L + SGV G G DP+
Sbjct: 70 SAATPKRLRLGFATYSSGFA-TGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTS 128
Query: 152 -------GVQSNLVQDSHTTITSLN-SPGELYTWGNNEYGQMGINN-SNTTVTKPQRVES 202
G + Q + + S+ + G ++ WG+N GQ+ +N S+ T P++VE+
Sbjct: 129 STPVKIGGFGGAVQQVAAGGLHSMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVET 188
Query: 203 LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV-HKTPQLIHGP 255
LPIA A A S ++ + + YA+G ++ QL + ++ + PQ + P
Sbjct: 189 -AKLPIAPTAIVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLP 241
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 139 (54.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G HS +L D GEV+ WG + HGQL E+A +P++++ C + +
Sbjct: 82 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEA--------HC--FQN 128
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
V +G H +A + G++FTWG +GQLG + + + K+ L +
Sbjct: 129 EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNS 188
Query: 121 CAGYSHCLVLTSSGVVTCTHKEN 143
HCL T + V+C + N
Sbjct: 189 MPSSPHCL--TGATEVSCGSEHN 209
Score = 127 (49.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 1 MTGLW----HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 56
+T +W H +A + G++FTWG +GQLG + + + K+ L +
Sbjct: 131 VTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMP 190
Query: 57 GYSHCLV-LTSTT-GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS 114
HCL T + G H+LA+ G ++WG + HG G + + PK V+ L S
Sbjct: 191 SSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCG--DGTEANVWAPKPVQALLS 247
Query: 115 VSVVQACAGYSHCLVL 130
S + G H L L
Sbjct: 248 SSGLLVGCGAGHSLAL 263
Score = 122 (48.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H++A G VF WG GL S ++ Q++P + G
Sbjct: 25 GLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL----FFTAKEPSRVTGLE 74
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + G HS +L D GEV+ WG + HGQL E+A +P++++ + V
Sbjct: 75 NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEAHCFQNEKV 131
Query: 118 VQACAGYSHCLVLTSSG 134
+G++H + T +G
Sbjct: 132 TAIWSGWTHLVAQTETG 148
Score = 95 (38.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
G Y+WG NE+G G + + V P+ V++L++ L+ CGA HS L
Sbjct: 215 GVCYSWGWNEHGMCG-DGTEANVWAPKPVQALLSSSGLLVGCGAGHSLAL 263
Score = 85 (35.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 51 VVQACAGYSHCLVLTSTTGL---WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPK 107
VV AG H + T++ G+ W + L CG G T L L K+ P
Sbjct: 19 VVCIAAGLRHAVAATAS-GIVFQWGT-GLASCGRRLC-PGQT---LPLFFTAKE----PS 68
Query: 108 RVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGCGSDPS-----QGVQSNLVQD 160
RV GL + + AG H LT +G V ++K ++ + Q ++++ Q+
Sbjct: 69 RVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQN 128
Query: 161 SHTT--------ITSLNSPGELYTWGNNEYGQMG 186
T + + G+++TWG +YGQ+G
Sbjct: 129 EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 162
>UNIPROTKB|A8I1Z0 [details] [associations]
symbol:CHLREDRAFT_126603 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
EMBL:DS496112 RefSeq:XP_001699826.1 ProteinModelPortal:A8I1Z0
EnsemblPlants:EDP07522 GeneID:5725577 KEGG:cre:CHLREDRAFT_126603
ProtClustDB:CLSN2923308 Uniprot:A8I1Z0
Length = 352
Score = 187 (70.9 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 40/97 (41%), Positives = 61/97 (62%)
Query: 720 YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y+ +R+ WF+ + E + FL+G + GLA+YN ++ P PL LY+++
Sbjct: 63 YGLMAYDPASRTYWFNASSLEPASSYFLLGLVLGLAVYNRVLLAFPAPLLLYQRLRGGRE 122
Query: 779 L-LQDLKDLSPTLAKSLQDILDYREPD-LEDVFGITF 813
L L+DL+ P LAK L+ IL+Y P+ L DVFG+TF
Sbjct: 123 LGLRDLEGWQPELAKGLRHILEYDGPEPLADVFGLTF 159
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/101 (38%), Positives = 59/101 (58%)
Query: 989 VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
V V R ++VED + E+ + T +D KPL+V+ F GEE DAGGV++EF
Sbjct: 4 VRVRRSHLVEDALEEVGRQTRSDLLKPLRVH------------FIGEEGIDAGGVKKEFF 51
Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
LL++ +LDP YG+ +R+ WF+ + E + YFL+G
Sbjct: 52 ALLMERLLDPGYGLMAYDPASRTYWFNASSLEPASSYFLLG 92
>UNIPROTKB|Q5U5R9 [details] [associations]
symbol:HECTD2 "Probable E3 ubiquitin-protein ligase HECTD2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005737 EMBL:CH471066 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:AK094625 EMBL:AL161798
EMBL:AC023902 EMBL:BC040187 EMBL:AL713675 IPI:IPI00166319
IPI:IPI00291138 RefSeq:NP_775768.2 RefSeq:NP_877497.2
UniGene:Hs.596096 ProteinModelPortal:Q5U5R9 SMR:Q5U5R9
STRING:Q5U5R9 PhosphoSite:Q5U5R9 DMDM:109892196 PaxDb:Q5U5R9
PRIDE:Q5U5R9 DNASU:143279 Ensembl:ENST00000298068
Ensembl:ENST00000371667 Ensembl:ENST00000371681 GeneID:143279
KEGG:hsa:143279 UCSC:uc001khl.2 CTD:143279 GeneCards:GC10P093160
HGNC:HGNC:26736 HPA:HPA037767 neXtProt:NX_Q5U5R9
PharmGKB:PA134933711 HOGENOM:HOG000208451 HOVERGEN:HBG081596
InParanoid:Q5U5R9 KO:K12232 PhylomeDB:Q5U5R9 GenomeRNAi:143279
NextBio:84683 ArrayExpress:Q5U5R9 Bgee:Q5U5R9 CleanEx:HS_HECTD2
Genevestigator:Q5U5R9 GermOnline:ENSG00000165338 Uniprot:Q5U5R9
Length = 776
Score = 200 (75.5 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
+ YT FY L + D+ +Y W + S R C YPF+ AK +++ D Q
Sbjct: 335 IPYTDFYNSTLDHI-DLMEEYHTWQNF--GNSHRFSFCQYPFVISVAAKKIIIQRDSEQQ 391
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M + Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 392 MINIARQSLVDKVSRRQRPDMNILFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 448
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 449 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDN 498
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 499 YSEFRLVG 506
Score = 43 (20.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 314 ILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNS 373
IL + + +K+ + +VE++KS YL T P +N +F + D S N+
Sbjct: 124 ILPIQPKTVKDFQEDVEKVKSSGDWKAVHDFYLTTFDSFPE-LNAAF---KKDATASFNT 179
Query: 374 KKFSFIKLSLIN 385
+ S I +N
Sbjct: 180 IEDSGINAKFVN 191
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 200 (75.5 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 69/246 (28%), Positives = 117/246 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+L D G V+ GG+ GQLGL D + + + V + ++ Q AG
Sbjct: 98 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD-TFHQIVFFTPADTIKQLSAG-------- 148
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+ T S AL + G++F WG ++ GQ+GLE DK + IP V +S + +C GY
Sbjct: 149 ANT----SAALTEDGKLFMWGDNSEGQIGLE--DKSNVCIPHEVTVGKPISWI-SC-GYY 200
Query: 126 HCLVLTSSG-VVTCTHKENGCGSDPSQ------------GVQSNLVQ----DSHTTITSL 168
H +T G + T ENG P++ G+ ++Q HT + +
Sbjct: 201 HSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 260
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
+Y +G ++GQ+G+ ++P+ +E + + I I+CG NH+ ++++ + L
Sbjct: 261 KV---VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE-LGLL 316
Query: 229 YAFGIG 234
Y FG G
Sbjct: 317 YTFGDG 322
Score = 189 (71.6 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 66/233 (28%), Positives = 108/233 (46%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S AL + G++F WG ++ GQ+GLE DK + IP V +S + +C GY H +T
Sbjct: 152 SAALTEDGKLFMWGDNSEGQIGLE--DKSNVCIPHEVTVGKPISWI-SC-GYYHSAFVTM 207
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
GE++T+G +G+LGL + + P+RV G+ V+Q G H
Sbjct: 208 D------------GELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGH 254
Query: 127 CLVLTSSGVVTC---THKENGCG------SDPS--QGVQSNLV-----QDSHTTITSLNS 170
+VLT V + G G S+P + ++ + ++HT + +
Sbjct: 255 TVVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTAL--MTE 312
Query: 171 PGELYTWGNNEYGQMGINNSN-TTVTKPQRVESLVNLPIALIACGANHSFVLS 222
G LYT+G+ +G++G+ N T P + + + LIACG H V +
Sbjct: 313 LGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFA 365
Score = 182 (69.1 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 74/262 (28%), Positives = 116/262 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ + +++ +G + GQLGL S K + P +K L V A G +H LV T
Sbjct: 46 HTAIVTGNNKLYMFGSNNWGQLGLGS--KAAIIKPTCIKALKPEKVKLAACGRNHTLVST 103
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
T G V+ GG+ GQLGL D + + + V + ++ Q AG +
Sbjct: 104 DTGG------------VYAAGGNNEGQLGLGDTDDRD-TFHQIVFFTPADTIKQLSAGAN 150
Query: 126 HCLVLT-----------SSGVVTCTHKENGC-GSDPSQGVQSNLVQDSHTTITSLNSPGE 173
LT S G + K N C + + G + + + + GE
Sbjct: 151 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGE 210
Query: 174 LYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
LYT+G E G++G+ N + PQRV + I +ACG H+ VL++ V +YAFG
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEKV--VYAFG 267
Query: 233 IGSAVQLDSPKSVHKT--PQLI 252
+G QL + +T P++I
Sbjct: 268 LGQFGQLGLGTFLFETSEPKII 289
Score = 45 (20.9 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 33/137 (24%), Positives = 57/137 (41%)
Query: 947 AKAKTTLLEM-DQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELA 1005
++ KT ++E+ D + E N + LF T+N E E ++D I E+ R
Sbjct: 618 SEKKTEVMEVADVKKIRESEENSKSDSLF-DDLPDKTMNS--ESEDNKD-IAEER-RSSE 672
Query: 1006 QYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKE 1065
Q T D + L S Y+ + R E + A + + L+ E D K +
Sbjct: 673 QNMTFDSETELVEEPDS--YMECE---RHSEQDSAEELEQPKLVEYSSEEKDEKDEKDDD 727
Query: 1066 YEETRSIWFSEDTFEDQ 1082
ET ++W+ + E +
Sbjct: 728 EVETENLWYDRNCTEQE 744
Score = 44 (20.5 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 27/135 (20%), Positives = 52/135 (38%)
Query: 999 DTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD- 1057
D + E +T + +V S + + K E D +R + D
Sbjct: 589 DQVEEPRVFTDGKGLQSKQVGKESDEEIVSEKKTEVMEVADVKKIRESEENSKSDSLFDD 648
Query: 1058 -PKYGMFKEYEETRSIWFSEDTFEDQNMYF-----LIGK--EYVPCTYISKYSMFKEYEE 1109
P M E E+ + I E +QNM F L+ + Y+ C S+ +E E+
Sbjct: 649 LPDKTMNSESEDNKDI-AEERRSSEQNMTFDSETELVEEPDSYMECERHSEQDSAEELEQ 707
Query: 1110 TRSIWFSEDTFEDQN 1124
+ + +S + ++++
Sbjct: 708 PKLVEYSSEEKDEKD 722
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 324 ECEREVEQLKSDETLDQDLLL 344
ECER EQ S E L+Q L+
Sbjct: 692 ECERHSEQ-DSAEELEQPKLV 711
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 144 (55.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 70/263 (26%), Positives = 115/263 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 75 GGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL + G VF WG D +G +GL KKS +P +V+ VV+
Sbjct: 131 ----------TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LDAPVVKV 177
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPS--------QGVQSNLV------------ 158
+G H ++LT+ G + T E G G P QG+ LV
Sbjct: 178 ASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTR 237
Query: 159 -----QDSH--TTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
QD+ T +++ G +Y +G + Y Q+G + + PQ + S N +
Sbjct: 238 GRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFI-PQNLTSFKNSTKSW 296
Query: 211 IA-CGANHSFVLSKSVSRLYAFG 232
+ G H V S + Y+ G
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLG 319
Score = 127 (49.8 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 58/189 (30%), Positives = 91/189 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
G V T G GD GQLGL +S+ +R K A V ++Q V+ + G H
Sbjct: 35 GLVLTLGQGDV-GQLGL------GESVLERKKP-ALVPLLQD--------VVQAEAGGMH 78
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH LT
Sbjct: 79 TVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAALTE 136
Query: 133 SGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGELYTW 177
G V + ++N G +P + VQ L V + + L + G+LYT
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTL 196
Query: 178 GNNEYGQMG 186
G E GQ+G
Sbjct: 197 GCGEQGQLG 205
Score = 110 (43.8 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 29/106 (27%), Positives = 61/106 (57%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN-LPI-ALIACGANHSF 219
H T+ ++S G+ Y+ G EYG++G+ + + + +L++ LP+ + +ACGA+ +
Sbjct: 304 HHTVC-MDSEGKAYSLGRAEYGRLGLGEG----AEEKSIPTLISRLPVVSSVACGASVGY 358
Query: 220 VLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMT 264
+SK R++A+G+G+ QL + + +P + G + + V +T
Sbjct: 359 AVSKD-GRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLT 403
Score = 47 (21.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
R++A+G+G+ QL + + W SPV MT + L + VV + SGG
Sbjct: 365 RVFAWGMGTNYQLGTGQD--------EDAW--SPVEMTGKQ--LENR----VVLTVSSGG 408
Query: 287 DHSIVTV 293
H+++ V
Sbjct: 409 QHTVLLV 415
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 205 (77.2 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 70/248 (28%), Positives = 118/248 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV-SVVQACAGYSHCLVL 64
H+L + G+V+ GG+ GQLGL D + +S + S + Q AG
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGL--GDTEERSTFHLISFFTSQRKIKQLSAG------- 148
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
S T S AL + GE+F WG ++ GQ+GLE+ + +P++V +S + +C GY
Sbjct: 149 -SNT----SAALTEDGELFMWGDNSEGQIGLENVT--NVCVPQQVTVGKPISWI-SC-GY 199
Query: 125 SHCLVLTSSGVVTCTHKENGCGS--------------DPSQGVQSNLVQ----DSHTTIT 166
H +T+ G + T E CG P G+ +VQ HT +
Sbjct: 200 YHSAFVTTEGQLY-TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVL 258
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+ + +YT+G ++GQ+G+ + P+ +E + + I+ IACG NH+ +++ +
Sbjct: 259 TEKA---VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALIT-DMG 314
Query: 227 RLYAFGIG 234
+Y FG G
Sbjct: 315 LMYTFGDG 322
Score = 195 (73.7 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 76/235 (32%), Positives = 105/235 (44%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
H+ + +++ +G + GQLGL S K + S P VK L V A G +H LV T
Sbjct: 46 HTAVVTGNNKLYMFGSNNWGQLGLGS--KSTVSKPTCVKALKPEKVKFAACGRNHTLVST 103
Query: 132 SSGVVTCTHKEN----GCGSDPSQGV---------QSNLVQDSHTTITS--LNSPGELYT 176
G V N G G + Q + Q S + TS L GEL+
Sbjct: 104 EGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFM 163
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS-FVLSKSVSRLYAFGIGS 235
WG+N GQ+G+ N T V PQ+V V PI+ I+CG HS FV ++ +LY FG
Sbjct: 164 WGDNSEGQIGLENV-TNVCVPQQVT--VGKPISWISCGYYHSAFVTTEG--QLYTFGEPE 218
Query: 236 AVQLDSPKSV---HKTPQLIHG-PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
+L P + H+ PQ + G P VA G H+ L K +Y+ G
Sbjct: 219 CGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGG------HTVVLTEKAVYTFG 267
Score = 178 (67.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 67/246 (27%), Positives = 111/246 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ + +++ +G + GQLGL S K + S P VK L V A G +H LV
Sbjct: 46 HTAVVTGNNKLYMFGSNNWGQLGLGS--KSTVSKPTCVKALKPEKVKFAACGRNHTLV-- 101
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-------SIPKRVKGLASVSVV 118
ST G G+V+ GG+ GQLGL +++S + +++K L++ S
Sbjct: 102 STEG----------GKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNT 151
Query: 119 QACAGYSHCLVL---TSSGVVTCTHKENGC-GSDPSQGVQSNLVQDSHTTITSLNSPGEL 174
A L + S G + + N C + G + + + + + G+L
Sbjct: 152 SAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQL 211
Query: 175 YTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
YT+G E G++G+ N + PQ V + + +ACG H+ VL++ +Y FG+
Sbjct: 212 YTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA--VYTFGL 268
Query: 234 GSAVQL 239
G QL
Sbjct: 269 GQFGQL 274
Score = 177 (67.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 61/233 (26%), Positives = 111/233 (47%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S AL + GE+F WG ++ GQ+GLE+ + +P++V +S + +C GY H +T+
Sbjct: 152 SAALTEDGELFMWGDNSEGQIGLENVT--NVCVPQQVTVGKPISWI-SC-GYYHSAFVTT 207
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
G+++T+G G+LGL + + +P+ V G+ VVQ G H
Sbjct: 208 E------------GQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGH 254
Query: 127 CLVLTSSGVVTC---THKENGCG------SDPS--QGVQSNLVQ-----DSHTTITSLNS 170
+VLT V T + G G S P + ++ + ++HT + +
Sbjct: 255 TVVLTEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTAL--ITD 312
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLS 222
G +YT+G+ +G++G+ N+T P + + + L++CG H+ V +
Sbjct: 313 MGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 39 (18.8 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 617 CPSCYTLALMEPRSTLTGT 635
C C+TL PR L GT
Sbjct: 356 CGGCHTLVFATPR--LGGT 372
Score = 39 (18.8 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 269 SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLN 309
+L S+ +V+ + GG H++V T G + + +N
Sbjct: 341 TLCSNFLRFIVQLVSCGGCHTLVFATPRLGGTEEMELKEIN 381
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 187 (70.9 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 73/255 (28%), Positives = 114/255 (44%)
Query: 11 NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGL 70
ND EVF +G + LG + D +S +PK+++ L + G +G
Sbjct: 40 ND--EVFVFGLNCSNCLG--TGDSQSTIVPKKLEALCGKKISSLSYG----------SGP 85
Query: 71 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 130
H L + GEV+ WG + + QLG A + + + L V++ G H + L
Sbjct: 86 -HVLLCTEDGEVYAWGHNGYSQLG-NGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL 143
Query: 131 TSSGVVTCTHKEN----GCGSDPSQGVQ---SNLVQDS--------HTTITSLNSPGELY 175
+ G + N G GS +Q SN +QD T+ ++ + GE+Y
Sbjct: 144 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVY 203
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
WG N GQ+G+ N+ +T P RV +L + I IACG H+ L+ LYA+G +
Sbjct: 204 GWGYNGNGQLGLGNNGNQLT-PCRVAALHGVCILQIACGYAHTLALTDE-GLLYAWGANT 261
Query: 236 AVQLDSP-KSVHKTP 249
QL + KS +P
Sbjct: 262 YGQLGTGNKSNQLSP 276
Score = 177 (67.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 59/192 (30%), Positives = 93/192 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+AL+ G+++ WG + GQ+G S +Q P+RV +V A C
Sbjct: 136 GSHHSMALSFDGDLYAWGYNNCGQVG--SGSTANQPTPRRVSNCLQDKMVVGIA----C- 188
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G S+A+ + GEV+ WG + +GQLGL + +Q P RV L V ++Q
Sbjct: 189 ------GQTSSMAVVNNGEVYGWGYNGNGQLGL--GNNGNQLTPCRVAALHGVCILQIAC 240
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGSDPSQ--GVQ-----SNLVQ-----DSHTTIT 166
GY+H L LT G++ T+ + G G+ +Q +Q +V+ +HT+
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAA 300
Query: 167 SLNSPGELYTWG 178
S G++Y WG
Sbjct: 301 KTQS-GQVYMWG 311
Score = 176 (67.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/242 (25%), Positives = 104/242 (42%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + GEV+ WG + + QLG + ++ V+ VQ C V+
Sbjct: 86 HVLLCTEDGEVYAWGHNGYSQLGNGATNQ-------------GVTPVQVCTNLLLKKVIE 132
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGY 124
G HS+AL+ G+++ WG + GQ+G S +Q P+RV L VV G
Sbjct: 133 VACGSHHSMALSFDGDLYAWGYNNCGQVG--SGSTANQPTPRRVSNCLQDKMVVGIACGQ 190
Query: 125 SHCLVLTSSG-VVTCTHKENG---CGSDPSQ----------GVQSNLVQDSHTTITSLNS 170
+ + + ++G V + NG G++ +Q GV + + +L
Sbjct: 191 TSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 250
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G LY WG N YGQ+G N + ++ P ++ + + AC + H+ ++Y
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLS-PLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYM 309
Query: 231 FG 232
+G
Sbjct: 310 WG 311
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 32/99 (32%), Positives = 52/99 (52%)
Query: 155 SNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
S+L S + GE+Y WG+N Y Q+G +N VT Q +L+ + +ACG
Sbjct: 77 SSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACG 136
Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
++HS LS LYA+G + Q+ S + ++ TP+ +
Sbjct: 137 SHHSMALSFD-GDLYAWGYNNCGQVGSGSTANQPTPRRV 174
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 203 (76.5 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 67/240 (27%), Positives = 106/240 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH+ + G++FT+G T G LG DK++ P+ V+ L+ + + G H
Sbjct: 387 GPWHTALITSTGQLFTFGDGTFGVLG--HGDKETVFYPREVESLSGLRTIAVACGVWHAA 444
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+ + HS + G++FTWG +LG DK+ + P V L + +
Sbjct: 445 AIVEVI-VTHSSSSVSSGKLFTWGDGDKSRLG--HGDKEPRLKPTCVSALIDHTFHRVAC 501
Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQDSHTT------------ITSL 168
G+S + LT+SG V T G G+ + G LV+D T + L
Sbjct: 502 GHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVL 561
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS--FVLSKSVS 226
S E++TWG G++G + P V++L + IACG+N + L K VS
Sbjct: 562 TSRNEVFTWGKGANGRLGHGDVEDRKA-PTLVDALKERHVKNIACGSNFTAAICLHKWVS 620
Score = 152 (58.6 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 72/266 (27%), Positives = 112/266 (42%)
Query: 6 HSLALNDC---GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
H A +DC G+V+ WG + ADK + R L + H +
Sbjct: 218 HGSAPDDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHI 277
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA-DKKSQSIPKRVKGLASVSVVQAC 121
G+ H+ ++ GEVFTWG + G+LG D + + + S+ V AC
Sbjct: 278 AC----GVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAA-TSIDFV-AC 331
Query: 122 AGYSHCLVLTSSGVVTC---THKEN--GCGSD-----------PSQGVQSNLVQDS--HT 163
+ C V + + T TH G G+D P +G+Q V HT
Sbjct: 332 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 391
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL-- 221
+ + S G+L+T+G+ +G +G + TV P+ VESL L +ACG H+ +
Sbjct: 392 AL--ITSTGQLFTFGDGTFGVLG-HGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVE 448
Query: 222 ------SKSVS--RLYAFGIGSAVQL 239
S SVS +L+ +G G +L
Sbjct: 449 VIVTHSSSSVSSGKLFTWGDGDKSRL 474
Score = 151 (58.2 bits), Expect = 8.8e-11, Sum P(4) = 8.8e-11
Identities = 46/148 (31%), Positives = 68/148 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYS 59
G +H+ A+ GE++TWG TH G LG D S IPKR+ G L + + A S
Sbjct: 332 GEFHTCAVTMTGEIYTWGDGTHNAGLLG-HGTDV-SHWIPKRISGPLEGLQI----ASVS 385
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
C G WH+ + G++FT+G T G LG DK++ P+ V+ L+ + +
Sbjct: 386 -C-------GPWHTALITSTGQLFTFGDGTFGVLG--HGDKETVFYPREVESLSGLRTIA 435
Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGS 147
G H + V TH + S
Sbjct: 436 VACGVWHAAAIVE---VIVTHSSSSVSS 460
Score = 146 (56.5 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 44/135 (32%), Positives = 68/135 (50%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G+ H+ ++ GEVFTWG + G+LG K + P+ ++ LA+ S+ + C
Sbjct: 280 GVKHAALVSRQGEVFTWGEASGGRLGHGMG--KDVTGPQLIESLAATSI-----DFVAC- 331
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
G +H+ A+ GE++TWG TH G LG D S IPKR+ G L + +
Sbjct: 332 ------GEFHTCAVTMTGEIYTWGDGTHNAGLLG-HGTDV-SHWIPKRISGPLEGLQIAS 383
Query: 120 ACAGYSHCLVLTSSG 134
G H ++TS+G
Sbjct: 384 VSCGPWHTALITSTG 398
Score = 104 (41.7 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 29/109 (26%), Positives = 55/109 (50%)
Query: 145 CGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV 204
CG + + +V S ++++S G+L+TWG+ + ++G + + KP V +L+
Sbjct: 438 CGVWHAAAIVEVIVTHSSSSVSS----GKLFTWGDGDKSRLGHGDKEPRL-KPTCVSALI 492
Query: 205 NLPIALIACGANHSFVLSKSVS-RLYAFGIGSAVQLDSPKSVHKTPQLI 252
+ +ACG HS + + S ++Y G QL +P + K P L+
Sbjct: 493 DHTFHRVACG--HSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLV 539
Score = 100 (40.3 bits), Expect = 8.8e-11, Sum P(4) = 8.8e-11
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANHSFV 220
H+ L + G++YT G+ YGQ+G N N P VE L + IACGA H V
Sbjct: 503 HSLTVGLTTSGKVYTMGSTVYGQLG--NPNADGKLPCLVEDKLTKDCVEEIACGAYHVAV 560
Query: 221 LSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLI 252
L+ S + ++ +G G+ +L K P L+
Sbjct: 561 LT-SRNEVFTWGKGANGRLGHGDVEDRKAPTLV 592
Score = 49 (22.3 bits), Expect = 8.8e-11, Sum P(4) = 8.8e-11
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 447 NPGVDMQLCQDCYDTIARIERESVRS 472
NPG ++C C+ ++++ ++ S
Sbjct: 667 NPGKPYRVCDSCHSKLSKVSEANIDS 692
Score = 38 (18.4 bits), Expect = 8.8e-11, Sum P(4) = 8.8e-11
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 1090 KEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQ 1123
++Y P YI+ ++ + + + FS F +Q
Sbjct: 1003 EQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQ 1036
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 190 (71.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 66/244 (27%), Positives = 119/244 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV-SVVQACAGYSHCLVL 64
H+L + G V+ GG+ GQLGL D + ++ + S + Q AG
Sbjct: 98 HTLVSTEGGNVYATGGNNEGQLGL--GDTEERNTFHVISFFTSEHKIKQLSAG------- 148
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
S T S AL + G +F WG ++ GQ+GL++ + +P++V VS + +C GY
Sbjct: 149 -SNT----SAALTEDGRLFMWGDNSEGQIGLKNVS--NVCVPQQVTIGKPVSWI-SC-GY 199
Query: 125 SHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSN----LVQDSHTTITSLNSPGE------ 173
H +T+ G + ENG P+Q + ++ LV + + + GE
Sbjct: 200 YHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLT 259
Query: 174 ---LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
+YT+G ++GQ+G+ ++P+ +E++ + I+ I+CG NH+ +++ + +Y
Sbjct: 260 ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT-DIGLMYT 318
Query: 231 FGIG 234
FG G
Sbjct: 319 FGDG 322
Score = 189 (71.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/200 (32%), Positives = 92/200 (46%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
HS + +++ +G + GQLGL S K + S P VK L V A G +H LV T
Sbjct: 46 HSAVVTGNNKLYMFGSNNWGQLGLGS--KSAISKPTCVKALKPEKVKLAACGRNHTLVST 103
Query: 132 SSGVVTCTHKEN----GCGSDPSQGV---------QSNLVQDSHTTITS--LNSPGELYT 176
G V T N G G + + + Q S + TS L G L+
Sbjct: 104 EGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFM 163
Query: 177 WGNNEYGQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
WG+N GQ+G+ N SN V PQ+V + P++ I+CG HS ++ LY FG
Sbjct: 164 WGDNSEGQIGLKNVSNVCV--PQQVT--IGKPVSWISCGYYHSAFVTTD-GELYVFGEPE 218
Query: 236 AVQLDSPKSV---HKTPQLI 252
+L P + H+TPQL+
Sbjct: 219 NGKLGLPNQLLGNHRTPQLV 238
Score = 174 (66.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 67/247 (27%), Positives = 110/247 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + +++ +G + GQLGL S K + S P VK L V A G +H LV
Sbjct: 46 HSAVVTGNNKLYMFGSNNWGQLGLGS--KSAISKPTCVKALKPEKVKLAACGRNHTLV-- 101
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-------SIPKRVKGLASVSVV 118
ST G G V+ GG+ GQLGL ++++ + ++K L++ S
Sbjct: 102 STEG----------GNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNT 151
Query: 119 QACAGYSHCLVL---TSSGVVTCTHKENGCGSDPSQ---GVQSNLVQDSHTTITSLNSPG 172
A L + S G + + N C P Q G + + + + + G
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCV--PQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
ELY +G E G++G+ N + ++ S + + +ACG H+ VL+++ +Y FG
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA--VYTFG 267
Query: 233 IGSAVQL 239
+G QL
Sbjct: 268 LGQFGQL 274
Score = 167 (63.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 59/233 (25%), Positives = 108/233 (46%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S AL + G +F WG ++ GQ+GL++ + +P++V VS + +C GY H +T+
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVS--NVCVPQQVTIGKPVSWI-SC-GYYHSAFVTT 207
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
GE++ +G +G+LGL + + P+ V + V+Q G H
Sbjct: 208 D------------GELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEH 254
Query: 127 CLVLTSSGVVTC---THKENGCG------SDPS--QGVQSNLVQ-----DSHTTITSLNS 170
+VLT + V T + G G S+P + ++ + ++HT + +
Sbjct: 255 TVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTAL--ITD 312
Query: 171 PGELYTWGNNEYGQMGINNSN-TTVTKPQRVESLVNLPIALIACGANHSFVLS 222
G +YT+G+ +G++G+ N T P + + + L+ACG H V +
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 139 (54.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G HS +L D GEV+ WG + HGQL E+A +P++++ C + +
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEA--------HC--FQN 264
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
V +G H +A + G++FTWG +GQLG + + + K+ L +
Sbjct: 265 EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNS 324
Query: 121 CAGYSHCLVLTSSGVVTCTHKEN 143
HCL T + V+C + N
Sbjct: 325 MPSSPHCL--TGATEVSCGSEHN 345
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 1 MTGLW----HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 56
+T +W H +A + G++FTWG +GQLG + + + K+ L +
Sbjct: 267 VTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMP 326
Query: 57 GYSHCLV-LTSTT-GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS 114
HCL T + G H+LA+ G ++WG + HG G + + PK V+ L S
Sbjct: 327 SSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCG--DGTEANVWAPKPVQALLS 383
Query: 115 VSVVQACAGYSHCLVL 130
S + G H L L
Sbjct: 384 SSGLLVGCGAGHSLAL 399
Score = 125 (49.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 51/201 (25%), Positives = 91/201 (45%)
Query: 5 WH-SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W ++ L + G+V + G ++ GQLG+ ++ +P+ ++ L VV AG H +
Sbjct: 110 WDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVA 167
Query: 64 LTSTTGL---WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
T++ G+ W + L CG G T L L K+ P RV GL + +
Sbjct: 168 ATAS-GIVFQWGT-GLASCGRRLC-PGQT---LPLFFTAKE----PSRVTGLENSKAMCV 217
Query: 121 CAGYSHCLVLTSSGVVTC--THKENGCGSDPS-----QGVQSNLVQDSHTT--------I 165
AG H LT +G V ++K ++ + Q ++++ Q+ T +
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHL 277
Query: 166 TSLNSPGELYTWGNNEYGQMG 186
+ G+++TWG +YGQ+G
Sbjct: 278 VAQTETGKMFTWGRADYGQLG 298
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 62/247 (25%), Positives = 99/247 (40%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + D G++F G + GQLGL + P K L + Q G+ ++LT
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLT 117
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQL--GLESADKK----SQSIPKRVKGLASVSVVQ 119
G S N G++ G + +E +K + + V AS V Q
Sbjct: 118 EN-GQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQ 176
Query: 120 ACAGYSHC---LVLTSSGVVTCTHKENG--CGSDPSQGVQSNLVQDSHTTITSLNSPGEL 174
G + C L + + T KE G + S+ + L H+ SL GE+
Sbjct: 177 WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAM-CVLAGSDHSA--SLTDAGEV 233
Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGANHSFVLSKSVSRLYAFG 232
Y WG+N++GQ+ N + PQ++E+ N + I G H V +++ +G
Sbjct: 234 YVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH-LVAQTETGKMFTWG 290
Query: 233 IGSAVQL 239
QL
Sbjct: 291 RADYGQL 297
Score = 122 (48.0 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H++A G VF WG GL S ++ Q++P + G
Sbjct: 161 GLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL----FFTAKEPSRVTGLE 210
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + G HS +L D GEV+ WG + HGQL E+A +P++++ + V
Sbjct: 211 NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEAHCFQNEKV 267
Query: 118 VQACAGYSHCLVLTSSG 134
+G++H + T +G
Sbjct: 268 TAIWSGWTHLVAQTETG 284
Score = 110 (43.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 16 VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
+F WG +++GQLGL K+ +P+++ V+ G G HS
Sbjct: 17 LFAWGANSYGQLGL--GHKEDVLLPQQLNDFCKPRSVRRITG-----------GGGHSAV 63
Query: 76 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG- 134
+ D G++F G + GQLGL + P K L + Q G+ ++LT +G
Sbjct: 64 VTDGGDLFVCGLNKDGQLGLGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLTENGQ 121
Query: 135 VVTC 138
V++C
Sbjct: 122 VLSC 125
Score = 95 (38.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
G Y+WG NE+G G + + V P+ V++L++ L+ CGA HS L
Sbjct: 351 GVCYSWGWNEHGMCG-DGTEANVWAPKPVQALLSSSGLLVGCGAGHSLAL 399
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 183 (69.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 66/192 (34%), Positives = 92/192 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHC 61
G HS+AL GE+F WG + GQ+G S +Q P++V L + VV G
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHTKRVVNIACGQ--- 190
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
TS S+A+ D GEV+ WG + +GQLGL + +Q P RV L + V Q
Sbjct: 191 ---TS------SMAVLDSGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHGMCVNQIV 239
Query: 122 AGYSHCLVLTSSGVVTC----THKENGCGS-----DPSQ-GVQSNLVQD---SHTTITSL 168
GY+H L LT G++ T+ + G GS P+Q V+ V + H+T TS
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Query: 169 --NSPGELYTWG 178
G +Y WG
Sbjct: 300 AKTQGGHVYMWG 311
Score = 183 (69.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 67/242 (27%), Positives = 103/242 (42%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + G V+ WG + + QLG + ++ G+A V Q C V+
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGTTNQ----------GIAPV---QVCTNLLIKQVIE 132
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAG 123
G HS+AL GE+F WG + GQ+G S +Q P++V L + VV AC
Sbjct: 133 VACGSHHSMALAADGELFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 124 YSHCLVLTSSGVVTCTHKENG---CGSDPSQ----------GVQSNLVQDSHTTITSLNS 170
S VL S V + NG G++ +Q G+ N + + +L
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G LY WG N YGQ+G + N ++ P ++ I + AC + H+ +Y
Sbjct: 251 EGLLYAWGANTYGQLGTGSKNNLLS-PTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYM 309
Query: 231 FG 232
+G
Sbjct: 310 WG 311
Score = 172 (65.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 67/251 (26%), Positives = 111/251 (44%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
++ + D EVF +G + LG + D +S +PK+++ L + G ++LT+
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT 91
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRV-KGLASVSVVQACAGY 124
G+ V+ WG + + QLG + + Q I P +V L V++ G
Sbjct: 92 EDGV-----------VYAWGHNGYSQLGNGTTN---QGIAPVQVCTNLLIKQVIEVACGS 137
Query: 125 SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHT------------TITSL 168
H + L + G + N G GS +Q + HT ++ L
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVL 197
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
+S GE+Y WG N GQ+G+ N+ +T P RV +L + + I CG H+ L+ L
Sbjct: 198 DS-GEVYGWGYNGNGQLGLGNNGNQLT-PVRVAALHGMCVNQIVCGYAHTLALTDE-GLL 254
Query: 229 YAFGIGSAVQL 239
YA+G + QL
Sbjct: 255 YAWGANTYGQL 265
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 54/197 (27%), Positives = 87/197 (44%)
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
C+ TS ++ + D EVF +G + LG + D +S +PK+++ L +
Sbjct: 25 CVFGTSAN---EAIYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSL 79
Query: 121 CAGYS-HCLVLTSSGVVTCT-HKE-----NGC---GSDPSQGVQSNLVQD-------SHT 163
G H L+ T GVV H NG G P Q + L++ SH
Sbjct: 80 SYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHH 139
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP-IALIACGANHSFVLS 222
++ +L + GEL+ WG N GQ+G + S P++V + ++ + IACG S +
Sbjct: 140 SM-ALAADGELFAWGYNNCGQVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVL 197
Query: 223 KSVSRLYAFGIGSAVQL 239
S +Y +G QL
Sbjct: 198 DS-GEVYGWGYNGNGQL 213
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 226 (84.6 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 74/233 (31%), Positives = 109/233 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A++ GE++TWG +G+LG D +Q PK V LA VVQ G
Sbjct: 3133 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNTTQLKPKLVTALAGRRVVQVACGSRDA- 3189
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL + G VF+WG G+LG ++ P ++ L+ + VVQ
Sbjct: 3190 ---------QTLALTEDGAVFSWGDGDFGKLGRGGSE--GSDTPHEIERLSGIGVVQIEC 3238
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
G L LT +G V K + G G D P G++ V H + +L+
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 3296
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHS 218
G++Y WG+N++GQ G + NT V K P V L + + +ACG++HS
Sbjct: 3297 AVTDAGQVYAWGDNDHGQQG--SGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3347
Score = 224 (83.9 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 70/236 (29%), Positives = 111/236 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ G V TWG +G+LG D + Q PK +V+A GY +
Sbjct: 4196 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPK---------LVEALLGY-RAI 4243
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+ +G +L + D V++WG +G+LG +D +P +++ LA + VV+
Sbjct: 4244 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVVKVEC 4301
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGS-D----PS-----QGVQSNLVQDSHTTITSL 168
G + LT SG V K + G GS D P QG + + +
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4361
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
+ GE+YTWG+N+ GQ+G + + T + +P+ V +L I + CG+ H+ LS S
Sbjct: 4362 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 207 (77.9 bits), Expect = 9.9e-08, Sum P(4) = 9.9e-08
Identities = 77/266 (28%), Positives = 121/266 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+LAL G+VF+WG G+LG ++ + P+ V+ L + + G SH
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSSH----- 3136
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY- 124
S A++ GE++TWG +G+LG D +Q PK V LA VVQ G
Sbjct: 3137 -------SAAISSQGELYTWGLGEYGRLG--HGDNTTQLKPKLVTALAGRRVVQVACGSR 3187
Query: 125 -SHCLVLTSSGVVTCTHK-------ENGC-GSDPSQGVQS----NLVQ-DSHTTIT-SLN 169
+ L LT G V G GSD ++ +VQ + + +L
Sbjct: 3188 DAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 3247
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
GE++TWG +Y ++G + + V KPQ + L + +A GA H ++ + ++Y
Sbjct: 3248 RAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA-GQVY 3305
Query: 230 AFGIGSAVQLDSPKS-VHKTPQLIHG 254
A+G Q S + V+K P L+ G
Sbjct: 3306 AWGDNDHGQQGSGNTFVNKKPALVIG 3331
Score = 190 (71.9 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 75/264 (28%), Positives = 116/264 (43%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LAL GEV+ WG G+LG ++ S PK V+ L +SV G +H +T
Sbjct: 4147 HCLALTTEGEVYAWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4204
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
++ G V TWG +G+LG D + Q PK V+ L + AC +G
Sbjct: 4205 AS------------GHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACGSG 4250
Query: 124 YSHCLVLTSS-GVVTCTHKENGC----GSD----PSQ-----GVQSNLVQDSHTTITSLN 169
+ L +T V + + G GSD P + G+ V+ +L
Sbjct: 4251 DAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALT 4310
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G +YTWG ++ ++G + S V +P++V +L I IA G+ H S S +Y
Sbjct: 4311 KSGAVYTWGKGDFHRLG-HGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDS-GEVY 4368
Query: 230 AFGIGSAVQL-DSPKSVHKTPQLI 252
+G QL D + + P+L+
Sbjct: 4369 TWGDNDEGQLGDGTVTAIQRPRLV 4392
Score = 167 (63.8 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 69/260 (26%), Positives = 119/260 (45%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + +P ++ L VV+ A +S G H+
Sbjct: 3038 GKVYACGEGTNGRLGLGVTH--NVPLPHQLPVLRQY-VVKKVAVHS---------GGKHA 3085
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
LAL G+VF+WG G+LG ++ + P+ V+ L + + G SH ++S
Sbjct: 3086 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ 3143
Query: 134 G-VVTCTHKENG-CG-SDPSQGVQSNLV---------------QDSHTTITSLNSPGELY 175
G + T E G G D + ++ LV +D+ T +L G ++
Sbjct: 3144 GELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTL--ALTEDGAVF 3201
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
+WG+ ++G++G S + T P +E L + + I CGA S L+++ ++ +G G
Sbjct: 3202 SWGDGDFGKLGRGGSEGSDT-PHEIERLSGIGVVQIECGAQFSLALTRA-GEVWTWGKGD 3259
Query: 236 AVQLDSPKSVH-KTPQLIHG 254
+L H + PQ I G
Sbjct: 3260 YYRLGHGGDQHVRKPQPIGG 3279
Score = 46 (21.3 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VKF GE +D GG E + + E+
Sbjct: 4556 KVKFVGESVDDCGGGYSESIAEMCDEL 4582
Score = 43 (20.2 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 263 MTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
M+ LV H G+ V I G HS +T S
Sbjct: 4174 MSYDRPKLVEHLNGMSVADIACGSAHS-AAITAS 4206
Score = 40 (19.1 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 894 PAPHGGRKVAYTAFYMPDLATVCDIRID 921
P GG + ++ ++ A CD+++D
Sbjct: 3860 PQVRGGIHLMHSDYFKTLAALACDMQLD 3887
Score = 40 (19.1 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 495 PD--AEALRMFLTLPLYHE----FMNPRQHEILHMPFAGALPAFWIVVFGSLIGICGLGH 548
PD A ++ T L HE F P ++L + P W + +G I G GH
Sbjct: 3999 PDLHCHAHQLESTSTLLHEDHTLFQAPHDAQLLQ--WLNRRPDDWALSWGGASTIYGWGH 4056
Score = 39 (18.8 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 9/45 (20%), Positives = 24/45 (53%)
Query: 742 NMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDL 786
NM +G L G+A+ + +++ +++++ E + DL ++
Sbjct: 4620 NMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEV 4664
Score = 37 (18.1 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 1124 NMYFLIGTLCGLAI 1137
NM+ +G L G+A+
Sbjct: 4620 NMFRFLGVLMGIAV 4633
Score = 37 (18.1 bits), Expect = 4.6e-09, Sum P(4) = 4.6e-09
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 877 LTSSISAGGRTVSNIRTP 894
L S+ S TVSN+ P
Sbjct: 3974 LNSTTSLSSSTVSNVSPP 3991
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 182 (69.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 64/191 (33%), Positives = 90/191 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+AL GEVF WG + GQ+G S +Q P++V + V + A C
Sbjct: 165 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA----C- 217
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G S+A+ D GEV+ WG + +GQLGL + +Q P RV L SV V Q
Sbjct: 218 ------GQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 269
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGS-----DPSQ-GVQSNLVQD---SHTTITSL- 168
GY+H L LT G++ T+ + G G+ P+ V+ V + H+ TS
Sbjct: 270 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAA 329
Query: 169 -NSPGELYTWG 178
G +Y WG
Sbjct: 330 KTQGGHVYMWG 340
Score = 179 (68.1 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 67/256 (26%), Positives = 103/256 (40%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + G V+ WG + + QLG + ++ G+A + Q C V+
Sbjct: 115 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ----------GIAPI---QVCTNLLIKQVVE 161
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS-VVQ-ACAG 123
G HS+AL GEVF WG + GQ+G S +Q P++V + VV AC
Sbjct: 162 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIACGQ 219
Query: 124 YSHCLVLTSSGVVTCTHKENG---CGSDPSQ----------GVQSNLVQDSHTTITSLNS 170
S VL + V + NG G++ +Q V N + + +L
Sbjct: 220 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 279
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G LY WG N YGQ+G N N ++ P + + + AC + H+ +Y
Sbjct: 280 EGLLYAWGANTYGQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYM 338
Query: 231 FGIGSAVQLDSPKSVH 246
+G + P H
Sbjct: 339 WGQCRGQSVTLPHLTH 354
Score = 172 (65.6 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 69/248 (27%), Positives = 108/248 (43%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
+L + D EVF +G + LG + D +S +PK+++ L + G S VL S
Sbjct: 63 ALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYG-SGPHVLLS 119
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
T D G V+ WG + + QLG + ++ I + L VV+ G H
Sbjct: 120 T---------ED-GVVYAWGHNGYSQLGNGTTNQGIAPI-QVCTNLLIKQVVEVACGSHH 168
Query: 127 CLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSH-----------TTITSLNSP 171
+ L + G V N G GS +Q + H T+ ++
Sbjct: 169 SMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDN 228
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
GE+Y WG N GQ+G+ N+ +T P RV +L ++ + I CG H+ L+ LYA+
Sbjct: 229 GEVYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAW 286
Query: 232 GIGSAVQL 239
G + QL
Sbjct: 287 GANTYGQL 294
Score = 123 (48.4 bits), Expect = 0.00079, P = 0.00079
Identities = 50/197 (25%), Positives = 88/197 (44%)
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
C+ TS +L + D EVF +G + LG + D +S +PK+++ L +
Sbjct: 54 CVFGTSAN---EALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSL 108
Query: 121 CAGYS-HCLVLTSSGVVTCT----HKENGCGSDPSQGVQ-----SNLVQDSHTTIT---- 166
G H L+ T GVV + + G G+ +QG+ +NL+ +
Sbjct: 109 SYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT-NQGIAPIQVCTNLLIKQVVEVACGSH 167
Query: 167 ---SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP-IALIACGANHSFVLS 222
+L + GE++ WG N GQ+G + S P++V + +++ + IACG S +
Sbjct: 168 HSMALAADGEVFAWGYNNCGQVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVL 226
Query: 223 KSVSRLYAFGIGSAVQL 239
+ +Y +G QL
Sbjct: 227 DN-GEVYGWGYNGNGQL 242
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 194 (73.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WHS G++FT+G G LG +++S S PK V+ L + V+ H
Sbjct: 366 GTWHSALATANGKLFTFGDGAFGVLG--HGNRESVSYPKEVQSLNGLKTVKVACSIWHTA 423
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+ G + ++FTWG +LG +K++ +P V L + +
Sbjct: 424 AIVEVMG--QTATSMSSRKLFTWGDGDKNRLG--HGNKETYLLPTCVSSLIDYNFHKIAC 479
Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQD-------------SHTTITS 167
G++ + LT+SG V T +G G+ S G LVQD +H +
Sbjct: 480 GHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHH-VAV 538
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANH--SFVLSKSV 225
L S E++TWG G++G ++ T P VE+L + + ++CG+N S + K V
Sbjct: 539 LTSRSEVFTWGKGANGRLGHGDTEDKRT-PTLVEALRDRHVKSLSCGSNFTSSICIHKWV 597
Query: 226 S 226
S
Sbjct: 598 S 598
Score = 136 (52.9 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 47/136 (34%), Positives = 65/136 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGYSHC 61
G+ H + GEVFTWG + G+LG + S PK V+ LA ++ AC Y C
Sbjct: 259 GVRHVALVTRQGEVFTWGEEVGGRLG--HGIQVDISRPKLVEFLALTNIDFVACGEYHTC 316
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKG-LASVSVV 118
+V TS G++F+WG H G LG +D S IPKRV G L + V+
Sbjct: 317 VVSTS-------------GDLFSWGDGIHNVGLLG-HGSDI-SHWIPKRVSGPLEGLQVL 361
Query: 119 QACAGYSHCLVLTSSG 134
G H + T++G
Sbjct: 362 SVACGTWHSALATANG 377
Score = 129 (50.5 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 41/123 (33%), Positives = 62/123 (50%)
Query: 3 GLWHSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
G +H+ ++ G++F+WG H G LG +D S IPKRV G + +Q
Sbjct: 311 GEYHTCVVSTSGDLFSWGDGIHNVGLLG-HGSDI-SHWIPKRVSG--PLEGLQ------- 359
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ- 119
VL+ G WHS G++FT+G G LG +++S S PK V+ L + V+
Sbjct: 360 --VLSVACGTWHSALATANGKLFTFGDGAFGVLG--HGNRESVSYPKEVQSLNGLKTVKV 415
Query: 120 ACA 122
AC+
Sbjct: 416 ACS 418
Score = 114 (45.2 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANHSFV 220
HT +L + G ++T G +GQ+G NS + P V+ LV + IACGA+H V
Sbjct: 481 HTFTVALTTSGHVFTMGGTAHGQLG--NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAV 538
Query: 221 LSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVV 279
L+ S S ++ +G G+ +L + K TP L+ +++ G + + + +
Sbjct: 539 LT-SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSN----FTSSICI 593
Query: 280 KKIYSGGDHSIVTVTKSSDG 299
K SG D SI + + + G
Sbjct: 594 HKWVSGADQSICSGCRQAFG 613
Score = 101 (40.6 bits), Expect = 8.5e-09, Sum P(3) = 8.5e-09
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
+V+ T TS++S +L+TWG+ + ++G N T + P V SL++ IACG
Sbjct: 425 IVEVMGQTATSMSSR-KLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKIACG-- 480
Query: 217 HSFVLSKSVSRLYAFGIGSAV--QLDSPKSVHKTPQLI 252
H+F ++ + S + F +G QL + S K P L+
Sbjct: 481 HTFTVALTTSG-HVFTMGGTAHGQLGNSISDGKLPCLV 517
Score = 37 (18.1 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 448 PGVDMQLCQDCYDTIARIERESVRSLVSNLA 478
PG ++C CY + E ++ N+A
Sbjct: 646 PGKPHRVCDACYSKLKAAESGYSSNVNRNVA 676
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 180 (68.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 64/191 (33%), Positives = 89/191 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+AL GEVF WG + GQ+G S +Q P++V + V A C
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA----C- 188
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G S+A+ D GEV+ WG + +GQLGL + +Q P RV L SV V Q
Sbjct: 189 ------GQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGS-----DPSQ-GVQSNLVQD---SHTTITSL- 168
GY+H L LT G++ T+ + G G+ P+ V+ V + H+ TS
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAA 300
Query: 169 -NSPGELYTWG 178
G +Y WG
Sbjct: 301 KTQGGHVYMWG 311
Score = 180 (68.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 68/256 (26%), Positives = 102/256 (39%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + G V+ WG + + QLG + ++ GLA + Q C V+
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ----------GLAPI---QVCTNLLIKQVVE 132
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ--ACAG 123
G HS+AL GEVF WG + GQ+G S +Q P++V + V AC
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 124 YSHCLVLTSSGVVTCTHKENG---CGSDPSQ----------GVQSNLVQDSHTTITSLNS 170
S VL + V + NG G++ +Q V N + + +L
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G LY WG N YGQ+G N N ++ P + I + AC + H+ +Y
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLS-PAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYM 309
Query: 231 FGIGSAVQLDSPKSVH 246
+G + P H
Sbjct: 310 WGQCRGQSVTLPHLTH 325
Score = 172 (65.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
+L + D EVF +G + LG + D S +PK+++ L + G S VL S
Sbjct: 34 ALYVTDSDEVFVFGLNYSSCLG--TGDNHSTLVPKKLEALCGKKIKSLSYG-SGPHVLLS 90
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
T D G V+ WG + + QLG + ++ I + L VV+ G H
Sbjct: 91 T---------ED-GVVYAWGHNGYSQLGNGTTNQGLAPI-QVCTNLLIKQVVEVACGSHH 139
Query: 127 CLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSH-----------TTITSLNSP 171
+ L + G V N G GS +Q + H T+ ++
Sbjct: 140 SMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDN 199
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
GE+Y WG N GQ+G+ N+ +T P RV +L ++ + I CG H+ L+ LYA+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAW 257
Query: 232 GIGSAVQL 239
G + QL
Sbjct: 258 GANTYGQL 265
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 198 (74.8 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 66/240 (27%), Positives = 105/240 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G WH+ + G +FT+G T G LG DK++ P+ V+ L+ + + G H
Sbjct: 397 GPWHTALITSYGRLFTFGDGTFGVLG--HGDKETVQYPREVESLSGLRTIAVSCGVWHTA 454
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+ + + G++FTWG +LG DK + P V L + +
Sbjct: 455 AVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLG--HGDKDPRLKPTCVPALIDYNFHKIAC 512
Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQDSHTT------------ITSL 168
G+S + LT+SG V T G G+ + G LV+D + + +L
Sbjct: 513 GHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAAL 572
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS--FVLSKSVS 226
S E+YTWG G++G + P VE+L + + IACG+N++ L K VS
Sbjct: 573 TSRNEVYTWGKGANGRLGHGDLEDRKV-PTIVEALKDRHVKYIACGSNYTAAICLHKWVS 631
Score = 141 (54.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 41/126 (32%), Positives = 62/126 (49%)
Query: 3 GLWHSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
G +H+ A+ GE++TWG TH G LG +D S IPKR+ G + G H
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLG-HGSDI-SHWIPKRIAG--------SLEGL-H 390
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
V + + G WH+ + G +FT+G T G LG DK++ P+ V+ L+ + +
Sbjct: 391 --VASVSCGPWHTALITSYGRLFTFGDGTFGVLG--HGDKETVQYPREVESLSGLRTIAV 446
Query: 121 CAGYSH 126
G H
Sbjct: 447 SCGVWH 452
Score = 141 (54.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 46/135 (34%), Positives = 66/135 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G+ H+ + GE+FTWG ++ G+LG K P+ V+ L + S V A C
Sbjct: 289 GVRHAAFVTRQGEIFTWGEESGGRLG--HGIGKDVFHPRLVESLTATSSVDFVA----C- 341
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
G +H+ A+ GE++TWG TH G LG +D S IPKR+ G L + V
Sbjct: 342 ------GEFHTCAVTLAGELYTWGDGTHNVGLLG-HGSDI-SHWIPKRIAGSLEGLHVAS 393
Query: 120 ACAGYSHCLVLTSSG 134
G H ++TS G
Sbjct: 394 VSCGPWHTALITSYG 408
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 158 VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
+ S + I+ P + +N Q G+NN+N
Sbjct: 986 LSSSGSVISERIEPFQFQNNSDNGSSQTGVNNTN 1019
Score = 38 (18.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 460 DTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRM 502
+ +A E ES +S + AI + A L K + P E++++
Sbjct: 872 EALALAEEESAKSRAAKEAIKSLIAQL-KDVAEKLPPGESVKL 913
Score = 37 (18.1 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 229 YAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVS 272
+AF S L SPK + + + A P ++G S++S
Sbjct: 953 FAFANASWSNLQSPKQTPRASERNSNAYPADPRLSSSG--SVIS 994
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 181 (68.8 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 69/245 (28%), Positives = 109/245 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H + +N+ G + WG THGQLGL +A + + P R++ + + VV ACAG +++T
Sbjct: 463 HFVVVNEDGSAYAWGEGTHGQLGL-TALEAWKHYPSRMESVRNYHVVSACAGDGFTILVT 521
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G + + G + H LG + ++++ PK + LA V V Q AG
Sbjct: 522 QA------------GSLLSCGSNAHLALGQD--EQRNYHSPKLIARLADVRVEQVAAGLQ 567
Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHT------------TITSLN 169
H L L+ G V T T G G+ Q + SH T L
Sbjct: 568 HVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLF 627
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI-AC-GANHSFVLSKSVSR 227
+ GEL+ G+N+Y ++G S +T ++V+ LP + AC + HS L +
Sbjct: 628 ANGELHVCGSNDYNKLGFQRS-AKITAFKKVQ----LPHKVTQACFSSTHSVFLVEG-GY 681
Query: 228 LYAFG 232
+Y G
Sbjct: 682 VYTMG 686
Score = 132 (51.5 bits), Expect = 0.00015, P = 0.00015
Identities = 63/231 (27%), Positives = 101/231 (43%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
++ + G + + G + H LG + ++++ PK + LA V V Q AG
Sbjct: 517 TILVTQAGSLLSCGSNAHLALGQD--EQRNYHSPKLIARLADVRVEQVAAG--------- 565
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA--CAGY 124
L H LAL+ G V+ WG T G LGL + ++ Q P+++ L+ V + G
Sbjct: 566 ---LQHVLALSREGAVYVWGTSTCGALGLGNYQQQ-QKFPQKIL-LSHVKTKPSKIYCGP 620
Query: 125 SHCLVLTSSGVV-TCTHKE-NGCGSDPSQGVQS-NLVQDSHTT----ITSLNSP-----G 172
VL ++G + C + N G S + + VQ H +S +S G
Sbjct: 621 DTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKVTQACFSSTHSVFLVEGG 680
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+YT G N GQ GI + N+ V P V+S+ + I C + V S+
Sbjct: 681 YVYTMGRNAEGQRGIRHCNS-VDHPTLVDSVKSRYIVKANCSDQCTIVASE 730
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 116 (45.9 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 40/116 (34%), Positives = 59/116 (50%)
Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESL---VNLPIALIACGANHSFVLS------KS 224
LY+WGNN +GQ+G+ + + +PQ VE+ L + IACGA+H+ +L+ K
Sbjct: 229 LYSWGNNHHGQLGLGDGESRA-RPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKG 287
Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHG-PWIASPVAMTAG--EDSLVSHSG 275
S + FG G QL S KS P+ + P A V++ G S+VS G
Sbjct: 288 PSICWTFGFGENGQLGHRSNKS-SSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEG 342
Score = 114 (45.2 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 40/148 (27%), Positives = 68/148 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVSVVQACAGYSH 60
G +HSLA++D G V+ WG + +GQLG + + + + K + + +S S+ +
Sbjct: 81 GAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGS 140
Query: 61 CL-VLTSTTGLWHSLALNDCGEVFTWGG----DTHGQLGLESADKKSQSIPKRVKGLASV 115
L V T G SLA+++ G ++ WG D+ L S IP +
Sbjct: 141 DLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFT---SIPIPFPILDFHGR 197
Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKEN 143
+V++ G H + L G + HK+N
Sbjct: 198 TVLKVACGDEHVVALVGPGDI---HKDN 222
Score = 109 (43.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H++AL G V++WG G+LG + + + +P V G ++
Sbjct: 27 HTIALTGDGCVYSWGRGMFGRLG--TGKESDELVP------VLVEFPNQAEG-DRIRIVG 77
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV 109
G +HSLA++D G V+ WG + +GQLG + + + + K +
Sbjct: 78 VAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNL 121
Score = 89 (36.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSI---PKRVKGLASVSVV 118
+++ G H++AL G V++WG G+LG + +D+ + P + +G + +V
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEG-DRIRIV 76
Query: 119 QACAGYSHCLVLTSSGVVTCT-HKENG-CGSDPSQGVQSNLVQ---DSHTTITSLNSPG 172
AG H L ++ G V C + G G D + L++ + T+ +SLN G
Sbjct: 77 GVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSG 135
Score = 67 (28.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV-NLPIALIACGANHSFVLSKSVSRLY 229
P +T+G E GQ+G + SN + + P+ V L + + + CG H+ V+S S ++
Sbjct: 288 PSICWTFGFGENGQLG-HRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVS-SEGYVW 345
Query: 230 AFGI 233
++G+
Sbjct: 346 SWGM 349
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 187 (70.9 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 67/192 (34%), Positives = 92/192 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHC 61
G HS+AL GE+F WG + GQ+G S +Q P++V L + VV G
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHTKKVVNIACGQ--- 190
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
TS S+A+ D GEV+ WG + +GQLGL + +Q P RV L V V Q
Sbjct: 191 ---TS------SMAVLDSGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHGVCVNQIV 239
Query: 122 AGYSHCLVLTSSGVVTC----THKENGCGS-----DPSQ-GVQSNLVQD---SHTTITSL 168
GY+H L LT G++ T+ + G GS P+Q V+ V + H+T TS
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Query: 169 --NSPGELYTWG 178
G +Y WG
Sbjct: 300 AKTQGGHVYMWG 311
Score = 184 (69.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 67/242 (27%), Positives = 103/242 (42%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + G V+ WG + + QLG + ++ G+A + Q C V+
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ----------GIAPI---QVCTNLLVKQVVE 132
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAG 123
G HS+AL GE+F WG + GQ+G S +Q P++V L + VV AC
Sbjct: 133 VACGSHHSMALAADGELFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHTKKVVNIACGQ 190
Query: 124 YSHCLVLTSSGVVTCTHKENG---CGSDPSQ----------GVQSNLVQDSHTTITSLNS 170
S VL S V + NG G++ +Q GV N + + +L
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTD 250
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G LY WG N YGQ+G + N ++ P ++ I + AC + H+ +Y
Sbjct: 251 EGLLYAWGANTYGQLGTGSKNNLLS-PTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYM 309
Query: 231 FG 232
+G
Sbjct: 310 WG 311
Score = 170 (64.9 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 69/249 (27%), Positives = 109/249 (43%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
++ + D EVF +G + LG + D +S +PK+++ L + G S VL S
Sbjct: 34 AIYVTDSDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKRIKSLSYG-SGPHVLLS 90
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
T D G V+ WG + + QLG + ++ I + L VV+ G H
Sbjct: 91 T---------ED-GVVYAWGHNGYSQLGNGTTNQGIAPI-QVCTNLLVKQVVEVACGSHH 139
Query: 127 CLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHT------------TITSLNS 170
+ L + G + N G GS +Q + HT ++ L+S
Sbjct: 140 SMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDS 199
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
GE+Y WG N GQ+G+ N+ +T P RV +L + + I CG H+ L+ LYA
Sbjct: 200 -GEVYGWGYNGNGQLGLGNNGNQLT-PVRVAALHGVCVNQIVCGYAHTLALTDE-GLLYA 256
Query: 231 FGIGSAVQL 239
+G + QL
Sbjct: 257 WGANTYGQL 265
Score = 39 (18.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 368 HFSCNSKKFSFIKLSLINW 386
HFSC F+ ++W
Sbjct: 325 HFSCTDDVFACFGTPAVSW 343
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 115 (45.5 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNS---NTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+L +L +WG N++GQ G++ VTKP+R+ N+ I IA G +HS +LS+
Sbjct: 288 ALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQ 347
Query: 224 SVSRLYAFGIGSAVQLDSPKS--VHKTPQLIHGPWIASPV 261
LY+ G ++ PK T + +HG A P+
Sbjct: 348 D-GDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPL 386
Score = 113 (44.8 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 42/145 (28%), Positives = 62/145 (42%)
Query: 7 SLALNDCGEVFTWGGD--THGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
S AL GEV+ WG G LG K Q P +V + ++VQ G H L L
Sbjct: 177 SCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFL 236
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADK-KSQSIPKRVKGLASVSVVQACAG 123
++ G VF WG QLG + ++ + +++ R GL V + +G
Sbjct: 237 ------------DEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYI--ASG 282
Query: 124 YSHCLVLTSSG-VVTCTHKENG-CG 146
+HC LT +V+ + G CG
Sbjct: 283 ENHCFALTKDNKLVSWGLNQFGQCG 307
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
++F WG + +LGL K + KR + + +++ G H+L
Sbjct: 47 DIFCWGTGSMCELGLGPLAKNKEV--KRPR-------LNPFLPRDEAKIISFAVGGMHTL 97
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQ 103
AL++ V++WG + G LG ++++ K Q
Sbjct: 98 ALDEESNVWSWGCNDVGALGRDTSNAKEQ 126
Score = 65 (27.9 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ 37
G H+LAL++ V++WG + G LG ++++ K Q
Sbjct: 92 GGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQ 126
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 116 (45.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
++ + G+ YT+G+N++GQ+G N+ P +V+ L N+ IA++ACG + +
Sbjct: 584 AVTASGDCYTFGSNQHGQLG-TNARRVSRAPCQVQGLQNIKIAMVACGDAFTVAVGAE-G 641
Query: 227 RLYAFGIGSAVQL---DSPKSVHKTPQL--IHGPWIASPVAMTAGEDSL 270
+Y++G G+ +L D + + QL IH P+ + V+ G L
Sbjct: 642 EVYSWGKGARGRLGRRDEDAGLPRPVQLDEIH-PYTVTSVSCCHGNTLL 689
Score = 114 (45.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 41/141 (29%), Positives = 64/141 (45%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L D G + T+G ++G LG S + SQ P V+ L +VQ G SH L L++
Sbjct: 415 LTDRGIIMTFGSGSNGCLGHGSLNDISQ--PTIVEALLGYEMVQVACGASHVLALSTER- 471
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
E+F WG G+LGL + ++S S P++V + G ++
Sbjct: 472 -----------ELFAWGRGDGGRLGLGT--RESHSCPQQVSMPPGQEAQRVVCGIDSSMI 518
Query: 130 LTSSG-VVTC-THKENGCGSD 148
LT G + C +++ N G D
Sbjct: 519 LTVPGRALACGSNRFNKLGLD 539
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 181 (68.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 64/191 (33%), Positives = 89/191 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+AL GEVF WG + GQ+G S +Q P++V + V A C
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTTNQPTPRKVTNCLHIKRVVGIA----C- 188
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G S+A+ D GEV+ WG + +GQLGL + +Q P RV L SV V Q
Sbjct: 189 ------GQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGS-----DPSQ-GVQSNLVQD---SHTTITSL- 168
GY+H L LT G++ T+ + G G+ P+ V+ V + H+ TS
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAA 300
Query: 169 -NSPGELYTWG 178
G +Y WG
Sbjct: 301 KTQGGHVYMWG 311
Score = 176 (67.0 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 64/242 (26%), Positives = 99/242 (40%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + G V+ WG + + QLG + ++ G+A + Q C V+
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ----------GIAPI---QVCTNLLIKQVVE 132
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ--ACAG 123
G HS+AL GEVF WG + GQ+G S +Q P++V + V AC
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 124 YSHCLVLTSSGVVTCTHKENG---CGSDPSQ----------GVQSNLVQDSHTTITSLNS 170
S VL + V + NG G++ +Q V N + + +L
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G LY WG N YGQ+G N N ++ P + + + AC + H+ +Y
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYM 309
Query: 231 FG 232
+G
Sbjct: 310 WG 311
Score = 174 (66.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 92/355 (25%), Positives = 144/355 (40%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
+L + D EVF +G + LG + D +S +PK+++ L + G S VL S
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYG-SGPHVLLS 90
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
T D G V+ WG + + QLG + ++ I + L VV+ G H
Sbjct: 91 T---------ED-GVVYAWGHNGYSQLGNGTTNQGIAPI-QVCTNLLIKQVVEVACGSHH 139
Query: 127 CLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSH-----------TTITSLNSP 171
+ L + G V N G GS +Q + H T+ ++
Sbjct: 140 SMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDN 199
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
GE+Y WG N GQ+G+ N+ +T P RV +L ++ + I CG H+ L+ LYA+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAW 257
Query: 232 GIGSAVQLDSP-KSVHKTPQ--LIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
G + QL + K+ +P ++ + A + S GG V G
Sbjct: 258 GANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQ- 316
Query: 289 SIVTVTKSSDGVLSDDFRVL-NPAT--QILDVNFER-LKECEREVEQLKSDETLD 339
S+V + D F PA ++L V E L E ++ S ET D
Sbjct: 317 SVVLPHLTHFSCTDDVFACFATPAVSWRLLSVEHEDFLTVAESLKKEFDSPETAD 371
Score = 41 (19.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 354 GCMNGSFLQVENDEHFSCNSKKFSFIKLSLINW 386
G G + + + HFSC F+ ++W
Sbjct: 311 GQCRGQSVVLPHLTHFSCTDDVFACFATPAVSW 343
>FB|FBgn0061469 [details] [associations]
symbol:Ube3a "Ubiquitin protein ligase E3A" species:7227
"Drosophila melanogaster" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS;IBA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0005938 GO:GO:0005634 EMBL:AE014296 GO:GO:0007623
GO:GO:0040011 GO:GO:0007616 GO:GO:0048813 GO:GO:0004842
GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:7337 KO:K10587 InterPro:IPR017134
PIRSF:PIRSF037201 HSSP:Q05086 EMBL:AY069489 RefSeq:NP_648452.1
UniGene:Dm.928 SMR:Q9VTH1 STRING:Q9VTH1 EnsemblMetazoa:FBtr0076186
GeneID:39266 KEGG:dme:Dmel_CG6190 UCSC:CG6190-RA
FlyBase:FBgn0061469 InParanoid:Q9VTH1 OMA:MYSERYS OrthoDB:EOG4J6Q5V
GenomeRNAi:39266 NextBio:812798 Uniprot:Q9VTH1
Length = 973
Score = 191 (72.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 724 EYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
+ EET ++WF+ FE+ LIG + GLAIYN + + FP+ +Y+K++ DL
Sbjct: 689 QQEETNNMWFNATPFENGAQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADL 748
Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
D SP L KSL+ +LDY+ D+E+VF TF+ Y
Sbjct: 749 SDWSPALYKSLKSMLDYQGQDMEEVFEQTFKISY 782
Score = 164 (62.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 47/153 (30%), Positives = 75/153 (49%)
Query: 941 YPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFL----QTFNPHTLNQYLEVEVSRDNI 996
Y FI K L D R++M ++ ++ + L Q L++ V RD +
Sbjct: 571 YAFILTPSTKVDALYYDSRMRM-YSERYSSLHSILNNIGQVGQEDNPRPDLKLTVRRDQL 629
Query: 997 VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
+ D + L ++ K LK L V+F GE+ D GGV +EF L+++EI
Sbjct: 630 INDALIGLEMVAMSN-PKDLKKQ------LV--VEFVGEQGIDEGGVSKEFFQLIVEEIF 680
Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+P +GMF + EET ++WF+ FE+ + LIG
Sbjct: 681 NPAFGMFIQQEETNNMWFNATPFENGAQFTLIG 713
Score = 38 (18.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 424 SPGCMNGSFLQVENDEHFSCNSKNPGVDMQ 453
SPG +N L+ EH VD Q
Sbjct: 246 SPGALNKEQLRTLEGEHDKDEDSTQQVDEQ 275
>SGD|S000003797 [details] [associations]
symbol:HUL4 "Protein with similarity to hect domain E3
ubiquitin-protein ligases" species:4932 "Saccharomyces cerevisiae"
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISS;IBA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005622
"intracellular" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 SGD:S000003797 GO:GO:0005634
EMBL:BK006943 GO:GO:0004842 GO:GO:0042787 EMBL:L36344
SUPFAM:SSF56204 eggNOG:COG5021 KO:K12232
GeneTree:ENSGT00660000095216 HOGENOM:HOG000246763 OMA:NEPGIDA
OrthoDB:EOG42Z7Z7 EMBL:Z49536 EMBL:X81635 PIR:S57055
RefSeq:NP_012570.3 RefSeq:NP_012575.3 ProteinModelPortal:P40985
SMR:P40985 IntAct:P40985 MINT:MINT-2782607 STRING:P40985
EnsemblFungi:YJR036C GeneID:853494 GeneID:853498 KEGG:sce:YJR036C
KEGG:sce:YJR041C CYGD:YJR036c KO:K14862 NextBio:974128
Genevestigator:P40985 GermOnline:YJR036C Uniprot:P40985
Length = 892
Score = 182 (69.1 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 44/114 (38%), Positives = 66/114 (57%)
Query: 713 PKNGINHYGITEYEETRSIWFSED--TFEDQN-------MCFLIGTLCGLAIYNYTIINM 763
P NG+ Y I E +RS WF+ D F+ + +L G + GLAI+N TI+++
Sbjct: 579 PMNGLFIY-IKE--SSRS-WFAIDPPNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDL 634
Query: 764 PFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
FP ALYKK+ EP+ +D +L P +++L +L+Y E + EDVF +TF Y
Sbjct: 635 QFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTY 688
Score = 157 (60.3 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 931 NGSTRD-F-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLE 988
N +T+ F C YPFI K +++E + R MEH Q F + L +++ Y +
Sbjct: 466 NSTTKKCFSFCKYPFILSLGIKISIMEYEIRRIMEHEAEQA-FLISLD--KGKSVDVYFK 522
Query: 989 VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
++V RD I D++R + ++ D K L++ +F E DAGG+R+E+
Sbjct: 523 IKVRRDVISHDSLRCIKEHQ-GDLLKSLRI------------EFVNEPGIDAGGLRKEWF 569
Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSED 1077
LL K + +P G+F +E+ WF+ D
Sbjct: 570 FLLTKSLFNPMNGLFIYIKESSRSWFAID 598
Score = 58 (25.5 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 1108 EETRSIWFSED--TFEDQN-------MYFLIGTLCGLAIYNYTV---RFP 1145
E +RS WF+ D F+ +Y+L G + GLAI+N T+ +FP
Sbjct: 589 ESSRS-WFAIDPPNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDLQFP 637
Score = 46 (21.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 435 VENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESV 470
+E+ H SC + G+ M + + C+D + R+++ +
Sbjct: 120 LESSTHISCTLE--GLQM-VVRRCHDDLQRLKKTGI 152
Score = 38 (18.4 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 322 LKECEREVEQLKSDETLD--------QDLLLYLETVFLSPGCMNGSFL 361
++ C ++++LK LD Q ++ YL F +N SFL
Sbjct: 137 VRRCHDDLQRLKKTGILDKERKGLIFQPVITYLLDRFHDVSILNRSFL 184
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 170 (64.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 54/194 (27%), Positives = 90/194 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L+ G+VF+WG HGQLG + + + + P+ ++ L + + + AG
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPE--PRLLEALQGLRMAEVAAG----- 219
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL--ESADKKSQSIPKRVKGLAS--VSVV 118
G WHS+ L++ G+++ WG + GQL L +S + ++ GL V
Sbjct: 220 ------G-WHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEASGLEEDGSEVK 272
Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
+ AG + + S S+ V+ + HT + L GELYTWG
Sbjct: 273 RGSAGEDGA---PAPFIAVQPFPALLDLSPGSEAVKVSC-GSRHTAV--LTRTGELYTWG 326
Query: 179 NNEYGQMGINNSNT 192
+YGQ+G ++ T
Sbjct: 327 WGKYGQLGHKDTTT 340
Score = 149 (57.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 46/158 (29%), Positives = 76/158 (48%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGL--ESADKKSQSIPKRVKGLAS--VSVVQACAGY 124
G WHS+ L++ G+++ WG + GQL L +S + ++ GL V + AG
Sbjct: 219 GGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEASGLEEDGSEVKRGSAGE 278
Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
+ + S S+ V+ + HT + L GELYTWG +YGQ
Sbjct: 279 DGA---PAPFIAVQPFPALLDLSPGSEAVKVSC-GSRHTAV--LTRTGELYTWGWGKYGQ 332
Query: 185 MGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFV 220
+G + TT+ +P RVE V+ L + ++CG +++V
Sbjct: 333 LG-HKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYV 369
Score = 139 (54.0 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 46/176 (26%), Positives = 85/176 (48%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
G H+L L+ G+VF+WG HGQLG + + + + P+ ++ L + + + AG H +
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPE--PRLLEALQGLRMAEVAAGGWHSV 224
Query: 129 VLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
L+ +G + E+G + P++ +L +D TT + E + G G
Sbjct: 225 CLSETGDIYIWGWNESGQLALPTK----SLAEDGKTTAGEASGLEE--DGSEVKRGSAGE 278
Query: 188 NNSNTTVTKPQRVESLVNL-P---IALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
+ + Q +L++L P ++CG+ H+ VL+++ LY +G G QL
Sbjct: 279 DGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRT-GELYTWGWGKYGQL 333
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 181 (68.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 64/191 (33%), Positives = 89/191 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+AL GEVF WG + GQ+G S +Q P++V + V A C
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA----C- 188
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G S+A+ D GEV+ WG + +GQLGL + +Q P RV L SV V Q
Sbjct: 189 ------GQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 123 GYSHCLVLTSSGVVTC----THKENGCGS-----DPSQ-GVQSNLVQD---SHTTITSL- 168
GY+H L LT G++ T+ + G G+ P+ V+ V + H+ TS
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAA 300
Query: 169 -NSPGELYTWG 178
G +Y WG
Sbjct: 301 KTQGGHVYMWG 311
Score = 177 (67.4 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 65/242 (26%), Positives = 99/242 (40%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + G V+ WG + + QLG + ++ G+A V Q C V+
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ----------GIAPV---QVCTNLLIKQVVE 132
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ--ACAG 123
G HS+AL GEVF WG + GQ+G S +Q P++V + V AC
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 124 YSHCLVLTSSGVVTCTHKENG---CGSDPSQ----------GVQSNLVQDSHTTITSLNS 170
S VL + V + NG G++ +Q V N + + +L
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G LY WG N YGQ+G N N ++ P + + + AC + H+ +Y
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYM 309
Query: 231 FG 232
+G
Sbjct: 310 WG 311
Score = 40 (19.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 368 HFSCNSKKFSFIKLSLINW 386
HFSC F+ ++W
Sbjct: 325 HFSCTDDVFACFATPAVSW 343
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 179 (68.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 67/232 (28%), Positives = 105/232 (45%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S AL + G +F WG ++ GQLG + D + +PK + S+ V +C GY H ++T
Sbjct: 151 SAALTEDGRLFLWGDNSAGQLGFGN-DSHAL-LPKELNMGQSIHWV-SC-GYRHSALVT- 205
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
D G+V+++G G+LGL + + S P+RV+ L SV V AC G H
Sbjct: 206 -----------DSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQV-ACGG-KH 252
Query: 127 CLVLTSSGVVTCTHKENG-CGSDPSQGVQSNLVQDSH------TTITS-------LNSPG 172
L LT + E G G V + V H T +T + G
Sbjct: 253 TLALTEDELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSG 312
Query: 173 ELYTWGNNEYGQMGINNSN-TTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
LYT+G+ +G++G + N T P + + +ACG++H V ++
Sbjct: 313 LLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFAR 364
Score = 166 (63.5 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 70/252 (27%), Positives = 116/252 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-KGLASVSVVQACAGYSHC 61
G HS + + G +F +G + GQLGL+ ++ + +V KG + SV AC G H
Sbjct: 42 GQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSV--AC-GTDHT 98
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
LV TS GE+ GG++ GQLGL + S S +R++ + ++
Sbjct: 99 LVSTSQ------------GEILAAGGNSDGQLGLGHCND-SISF-QRLRPFCDYAPIKLL 144
Query: 122 AGYSHC-LVLTSSGVVTCTHKEN----GCGSD-----PSQ---GVQSNLVQDSHTTITSL 168
+ H LT G + + G G+D P + G + V + +
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALV 204
Query: 169 NSPGELYTWGNNEYGQMGIN-NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
G++Y++G + G++G++ + + PQRVESL + + +ACG H+ L++
Sbjct: 205 TDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHS--VLQVACGGKHTLALTED--E 260
Query: 228 LYAFGIGSAVQL 239
LY FG G QL
Sbjct: 261 LYCFGGGEFGQL 272
Score = 164 (62.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 66/245 (26%), Positives = 106/245 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L GE+ GG++ GQLGL + S S +R++ + ++ + H
Sbjct: 94 GTDHTLVSTSQGEILAAGGNSDGQLGLGHCND-SISF-QRLRPFCDYAPIKLLSAGDHT- 150
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL + G +F WG ++ GQLG + D + +PK + S+ V +C
Sbjct: 151 ----------SAALTEDGRLFLWGDNSAGQLGFGN-DSHAL-LPKELNMGQSIHWV-SC- 196
Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNL---VQDSHTTI--------TSLN 169
GY H ++T SG V + +G G Q + V+ H+ + T
Sbjct: 197 GYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQVACGGKHTLAL 256
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
+ ELY +G E+GQ+G+ P V + + CG HS +++ S LY
Sbjct: 257 TEDELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDS-GLLY 315
Query: 230 AFGIG 234
FG G
Sbjct: 316 TFGDG 320
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 191 (72.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 61/240 (25%), Positives = 111/240 (46%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLVLT 65
S A+ + G+++ WG +GQLG + K S P + + Y +
Sbjct: 138 SAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTN 197
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G H++A++ G +F+WG + +GQLGL + K +P + + + AG+
Sbjct: 198 ICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLD-----NSFERRAGHI 252
Query: 126 HCL--VLTSSGVVTCTHK---ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
+ L ++T+ H+ + CG+ H+ + +L G+L+ WG+N
Sbjct: 253 NSLGEIVTTDFTAKTIHRIVVDIACGN-------------FHSALLTLE--GDLFLWGSN 297
Query: 181 EYGQMGINNSNTTVTKPQRVE-SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
+YGQ+G +S + P+ V+ SL + I +A G NH+ +L+K ++ FG QL
Sbjct: 298 QYGQLGQGDS-LDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQD-VFTFGSNEFYQL 355
Score = 181 (68.8 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 45/141 (31%), Positives = 71/141 (50%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP--------KR---VKGLASVSV 51
G H++A++ G +F+WG + +GQLGL + K +P +R + L +
Sbjct: 201 GAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVT 260
Query: 52 VQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG 111
A H +V+ G +HS L G++F WG + +GQLG D QS+PK VKG
Sbjct: 261 TDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLG--QGDSLDQSVPKTVKG 318
Query: 112 -LASVSVVQACAGYSHCLVLT 131
L V + + G +H ++LT
Sbjct: 319 SLEFVKINRMALGNNHTILLT 339
Score = 53 (23.7 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMG---INNSNTTVTKPQRVESLVNLPIALIACG-A 215
++HT + L +++T+G+NE+ Q+G I N P +++ + + A G
Sbjct: 332 NNHTIL--LTKEQDVFTFGSNEFYQLGHGSIGGKNRLYF-PTQIQKPKVMASDIFAAGDC 388
Query: 216 NHSFVLSKSVSRLYAFG 232
+ FVL S L G
Sbjct: 389 SAYFVLDDSPVHLNLLG 405
Score = 47 (21.6 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 131 TSSGVVTCTHKENGCGS-DPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN 189
T+S + T N + PS + S+++ +S T TS++SP +++ +++ + N
Sbjct: 1050 TNSPNLQPTDNSNSTNTRPPSSSLLSSVI-NSLETATSIDSP-PMFSLNSDDNVDSSMEN 1107
Query: 190 SNTT 193
N T
Sbjct: 1108 RNFT 1111
Score = 43 (20.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 27/124 (21%), Positives = 55/124 (44%)
Query: 776 EPILLQDLKDLSPTLAK-SLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLIL--IF 832
EP+++ + P ++ S+ I + P + + + + ++ +S R++ IF
Sbjct: 1543 EPMVVSS-SNTPPIVSSPSVNTITPKQSPSSKSIQSLKNESEFICVSPSSPSRVLFNPIF 1601
Query: 833 KQCLIYLLQQPGVVDSTNGDITF-NRKLSF--CLQVLQKLNSLNNETLTSSISAGGRTVS 889
+ + Q+ VV N DI + K S + + + NS N T S+ ++ + S
Sbjct: 1602 DKS--FFEQKHRVV---NTDIVLGSHKRSSPPVISPIGEFNSTTNSTTNSTTNSTTNSNS 1656
Query: 890 NIRT 893
NI T
Sbjct: 1657 NINT 1660
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 146 (56.5 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 36/103 (34%), Positives = 58/103 (56%)
Query: 3 GLWHSLALNDCGEVFTWGG-DTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSH 60
G H+L L+D G++++WG ++ GQLG D K+Q PK +K S+++A +G S
Sbjct: 46 GSTHTLVLSDSGDLYSWGSSNSSGQLG--HGDSKNQYGKPKNIK---KFSLIKALSGDS- 99
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ 103
V+ +TGL + L D G ++ WG + GQL L K++
Sbjct: 100 --VIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKNE 140
Score = 146 (56.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 47/135 (34%), Positives = 65/135 (48%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQS-----IPKRVKGLAS--VSVVQACAG 57
H LAL+D V++WG HG+LG E SQ+ PK++K L V+V+ +G
Sbjct: 380 HILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSG 439
Query: 58 YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA-DKKSQSIPKRVKGLASVS 116
YSHC+ LT +G + TWG + GQLG D S KRV +
Sbjct: 440 YSHCMALTLDSG------------ILTWGKGSDGQLGTGFRHDIWSPFEIKRVID-KNEK 486
Query: 117 VVQACAGYSHCLVLT 131
+VQ C GY + +T
Sbjct: 487 IVQICCGYFNSFFIT 501
Score = 128 (50.1 bits), Expect = 4.1e-08, Sum P(4) = 4.1e-08
Identities = 37/99 (37%), Positives = 53/99 (53%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQS-----IPKRVKGLAS-- 114
++ + G H LAL+D V++WG HG+LG E SQ+ PK++K L
Sbjct: 371 IIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKG 430
Query: 115 VSVVQACAGYSHCLVLT-SSGVVTCTHKENGCGSDPSQG 152
V+V+ +GYSHC+ LT SG++T G GSD G
Sbjct: 431 VTVISVSSGYSHCMALTLDSGILTW-----GKGSDGQLG 464
Score = 92 (37.4 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 48/188 (25%), Positives = 85/188 (45%)
Query: 147 SDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG--INNSNTTVTKPQRVESLV 204
S S +N ++ TT T + S G G+N+ +G INN +T + +
Sbjct: 318 SSSSSAATNNELKFKQTTPTKVLSFG-----GSNDNNFLGGVINNELQMMT-----DQMN 367
Query: 205 NLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMT 264
++ I I+CG+NH LS +Y++G +L + Q + WI SP +
Sbjct: 368 SIKIIQISCGSNHILALSDQY-HVYSWGSAEHGKLGHGEDYSFVSQ--NPRWINSPKKIK 424
Query: 265 AGED---SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFR--VLNP--ATQILDV 317
+ ++ +++S S G + D I+T K SDG L FR + +P +++D
Sbjct: 425 SLQEKGVTVISVSSGYSHCMALTL-DSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDK 483
Query: 318 NFERLKEC 325
N + ++ C
Sbjct: 484 NEKIVQIC 491
Score = 80 (33.2 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV--NLPIALIACGANHS 218
SH +L+S G L TWG GQ+G + + P ++ ++ N I I CG +S
Sbjct: 441 SHCMALTLDS-GIL-TWGKGSDGQLGTGFRHD-IWSPFEIKRVIDKNEKIVQICCGYFNS 497
Query: 219 FVLSKSVSRLYAFG 232
F ++ LY FG
Sbjct: 498 FFITLEKRELYQFG 511
Score = 77 (32.2 bits), Expect = 4.1e-08, Sum P(4) = 4.1e-08
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK----- 196
EN S+ + + S SHT I LN GE + G E+GQ+GI ++++ K
Sbjct: 558 ENNDNSNRIKQISSGY---SHTLI--LNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVN 612
Query: 197 -PQRVESLVNLPIALIACGANHSFVL 221
P + +L+ + + CG HS +
Sbjct: 613 YPTVIPALLPYFVESVQCGRWHSVAI 638
Score = 68 (29.0 bits), Expect = 4.1e-08, Sum P(4) = 4.1e-08
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ 37
TGL + L D G ++ WG + GQL L K++
Sbjct: 105 TGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKNE 140
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 28/127 (22%), Positives = 58/127 (45%)
Query: 208 IALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGE 267
I I+ G +H+ +L+++ L + G G QL P H + + ++ P + A
Sbjct: 566 IKQISSGYSHTLILNENGECL-SIGQGEFGQLGIPLD-HSS--IDKDSFVNYPTVIPA-- 619
Query: 268 DSLVSHSGGLVVKKIYSGGDHSIVTVT-KSSDGVLSDDFRVLNPATQILDVNFERLKECE 326
L+ + V+ + G HS+ V+ ++ L++ ++ Q N E L+E E
Sbjct: 620 --LLPY----FVESVQCGRWHSVAIVSNRNLRDHLTNSKKLKEKQKQKQQTNLEILEEFE 673
Query: 327 REVEQLK 333
+E+++
Sbjct: 674 SNIEEIE 680
Score = 45 (20.9 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 114 SVSVVQACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN 169
S+ ++Q G +H L L+ V + H + G G D S Q+ +S I SL
Sbjct: 368 SIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQ 427
Query: 170 SPG 172
G
Sbjct: 428 EKG 430
Score = 41 (19.5 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 360 FLQVE-NDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTVLG 408
F Q+E + EHF F K +N ++ S F +G + T +G
Sbjct: 1087 FQQLELSTEHFLLEWMMTLFTKQLPLNIVFRIWDSYFMEGEAFIYSTAIG 1136
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 173 (66.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 75/297 (25%), Positives = 129/297 (43%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L D G + T+G ++G LG + SQ P V+ L +VQ G SH L L++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGNLTDISQ--PTIVEALLGYEMVQVACGASHVLALSTD-- 467
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
GE+F WG G+LGL + ++S + P++V + G ++
Sbjct: 468 ----------GELFAWGRGDGGRLGLGT--RESHNCPQQVPVAPGQEAQRVVCGIDSSMI 515
Query: 130 LTSSG-VVTC-THKENGCGSD---------PSQGVQSNLV--------QDSHTTI----- 165
LTS G V+ C +++ N G D P Q V+ L D +
Sbjct: 516 LTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLG 575
Query: 166 ----TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
++ + G+ YT+G+N++GQ+G +S P RV+ L + + ++ACG + +
Sbjct: 576 TAHSAAITASGDCYTFGSNQHGQLG-TSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
Query: 222 SKSVSRLYAFGIGSAVQL---DSPKSVHKTPQLIHG-PWIASPVAMTAGEDSLVSHS 274
+Y++G G+ +L D + + QL P++ + V+ G L S
Sbjct: 635 GAE-GEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSCCHGNTLLAVRS 690
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 168 (64.2 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 73/266 (27%), Positives = 123/266 (46%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVK--GLASVSVVQACAGYSHCLVLTSTTGLWH 72
+V++WG T GQLG + + + +P+ + L S+S++ AC G +H + LTS G
Sbjct: 16 QVWSWGAGTDGQLG--TTKLQDELLPQLLSLTSLPSISML-ACGG-AHVIALTS--G--- 66
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
G+VFTWG + GQLG D + ++PK V + QA AG+SH ++
Sbjct: 67 -------GKVFTWGRGSSGQLG--HGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSD 117
Query: 133 SGVV-TC---THKENGCGSDPSQGVQ---SNLVQDSHTTITS-------LNSPGELYTWG 178
SG + TC + + G G S S+ DS + L + ++ +G
Sbjct: 118 SGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFG 177
Query: 179 NNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
+ + GQ+G ++ +V P V L ++ + I+ +HS +S + +++G G
Sbjct: 178 SGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISAD-GQFFSWGRGFC- 235
Query: 238 QLDSPKSVHKTPQLIHGPWIASPVAM 263
P VH PQ + P VA+
Sbjct: 236 --GGP-DVH-APQSLPSPLSFREVAV 257
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 85/316 (26%), Positives = 131/316 (41%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H +AL G+VFTWG + GQLG D + ++PK V + QA AG+SH
Sbjct: 59 HVIALTSGGKVFTWGRGSSGQLG--HGDILNITLPKLVSFFDDSVITQAAAGWSH----- 111
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+G ++D G +FT G + GQLG D S S P +V + SV G
Sbjct: 112 --SGF-----VSDSGCIFTCGNGSFGQLG--HGDTLSLSTPAKVSHFNNDSVKMVACGMR 162
Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLV----QDSHTTITSLN-------- 169
H LVL + V + + G SD + V V +D S N
Sbjct: 163 HSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAIS 222
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS------K 223
+ G+ ++WG G V PQ + S L +A G NH+ +L+ K
Sbjct: 223 ADGQFFSWGRGFCG-------GPDVHAPQSLPS--PLSFREVAVGWNHALLLTVDGEVFK 273
Query: 224 SVSRLYAFGIGSAVQLDSPKSV-HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI 282
S L +Q+DS +++ K P G + +A A + V+ +G + K
Sbjct: 274 LGSTLNKQPEKQQLQIDSSEALFEKVPDF-DGVKVMQ-IAAGAEHSAAVTENGEV---KT 328
Query: 283 YSGGDHSIVTVTKSSD 298
+ G+H + + ++D
Sbjct: 329 WGWGEHGQLGLGNTND 344
Score = 152 (58.6 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 73/263 (27%), Positives = 113/263 (42%)
Query: 5 W-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W HS ++D G +FT G + GQLG D S S P +V + SV G H LV
Sbjct: 109 WSHSGFVSDSGCIFTCGNGSFGQLG--HGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLV 166
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
L + + CG +G GQLG S KS ++P V GL V VV+ A
Sbjct: 167 LFAGNQV--------CG----FGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISAN 214
Query: 124 YSHCLVLTSSGVVTCTHKENGCGSD--PSQGVQSNL------VQDSHTTITSLNSPGELY 175
H +++ G + G D Q + S L V +H + +++ GE++
Sbjct: 215 GDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWNHALLLTVD--GEVF 272
Query: 176 TWGNN-----EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
G+ E Q+ I++S K V + + IA GA HS ++++ +
Sbjct: 273 KLGSTLNKQPEKQQLQIDSSEALFEK---VPDFDGVKVMQIAAGAEHSAAVTEN-GEVKT 328
Query: 231 FGIGSAVQLDSPKSVHKT-PQLI 252
+G G QL + +T P+L+
Sbjct: 329 WGWGEHGQLGLGNTNDQTSPELV 351
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 170 (64.9 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 61/195 (31%), Positives = 88/195 (45%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
HSL + G++++WG + GQLG D K PK ++GL +V A G +H L LT
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLG--HGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTT------ITSL----------NSPGELY 175
+G V T EN G QG Q++ V T I + + G LY
Sbjct: 192 ENGTVY-TFGENKLGQ-LGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLY 249
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVE---SLVNLPIALIACGANHSFVLS--KSVSRLYA 230
++G EYGQ+G N+ + + QR+E L+ +A+ VL V+R A
Sbjct: 250 SFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVA 309
Query: 231 FGIGSAVQLDSPKSV 245
G + LDS K V
Sbjct: 310 CGANHTLVLDSQKRV 324
Score = 115 (45.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSL + G++++WG + GQLG D K PK ++GL +V A G +H L LT
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLG--HGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLG 94
G V+T+G + GQLG
Sbjct: 192 EN------------GTVYTFGENKLGQLG 208
Score = 73 (30.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 195 TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
TK +V + N+ +ACGANH+ VL S R++++G G +L + + P+L+
Sbjct: 292 TKDGQVLPVPNVVARDVACGANHTLVLD-SQKRVFSWGFGGYGRLGHAEQKDEMVPRLV 349
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 150 (57.9 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 44/134 (32%), Positives = 71/134 (52%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 75 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL D G VF WG D +G +GL KKS +P +V+ V VV+
Sbjct: 131 ----------TAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LDVPVVKV 177
Query: 121 CAGYSHCLVLTSSG 134
+G H ++LT+ G
Sbjct: 178 ASGNDHLVMLTADG 191
Score = 127 (49.8 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 61/192 (31%), Positives = 93/192 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVK-GLASV--SVVQACAGYSHCLVLTSTTG 69
G V T G GD GQLGL +++ +R K L S+ VVQA AG G
Sbjct: 35 GLVLTLGQGDV-GQLGL------GENVMERKKPALVSIPEDVVQAEAG-----------G 76
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
+ H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 77 M-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAA 133
Query: 130 LTSSGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGEL 174
LT G V + ++N G +P + VQ L V + + L + G+L
Sbjct: 134 LTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDL 193
Query: 175 YTWGNNEYGQMG 186
YT G E GQ+G
Sbjct: 194 YTLGCGEQGQLG 205
Score = 58 (25.5 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 25/100 (25%), Positives = 41/100 (41%)
Query: 158 VQDSHTTITSLNSPGELYTWGNNEYGQMG-INNSNTTVTKPQRVESLVNLPIALIA---- 212
V + + L + G+LYT G E GQ+G + Q +E L+ ++
Sbjct: 177 VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGS 236
Query: 213 ----------CGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
CGA +F +S +Y FG+ + QL +P
Sbjct: 237 RGHVRFQDAFCGAYFTFAISHE-GHVYGFGLSNYHQLGTP 275
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 170 (64.9 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 94/387 (24%), Positives = 168/387 (43%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG HS + D G ++T+G G+LG + +S S PK V+ + ++
Sbjct: 195 TGAIHSSFITDQGNLYTFGDGLLGKLG--HGNLESYSSPKLVEFFQTKPSLR-------- 244
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQA 120
V++ G HSLAL CG+V++WGG+ QLGL + S S+P+ + ++S
Sbjct: 245 -VVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLIN--FNIS---- 297
Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDP----SQGVQSN-----LVQDSHTTITS--LN 169
Y++ ++ + N G+ SQ SN +V+ S T S +
Sbjct: 298 ---YNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVIT 354
Query: 170 SPGELYTWGNNEYGQMGINNSNTTV-TKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
G L+T+G ++G++G+ + + + P+ V+SL I ++ G HS VL+ +
Sbjct: 355 DKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNK-GLV 413
Query: 229 YAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
++FG QL Q I P + + S + + K+ +GG H
Sbjct: 414 FSFGRNDQGQLGI--GCFSNQQTI-------PKQIQWFQTSQQQQQQPINIIKVSAGGYH 464
Query: 289 SIVTVTKSSDGVL--SDDFRVLNPATQIL-DVNFERLKECEREV-EQLKSDET---LDQD 341
SI ++ ++D D+ VL + + D N L V + +K + +
Sbjct: 465 SIA-ISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHN 523
Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEH 368
+ + ++ S GC G L ++DE+
Sbjct: 524 VAMSIDGSLYSWGCNAGQRLGFKSDEN 550
Score = 145 (56.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 64/252 (25%), Positives = 112/252 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G S + D G +FT+G HG+LGL QS PK V+ L ++ +G H L
Sbjct: 346 GTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSL 405
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-------- 114
VLT+ GL VF++G + GQLG+ Q+IPK+++ +
Sbjct: 406 VLTNK-GL-----------VFSFGRNDQGQLGI-GCFSNQQTIPKQIQWFQTSQQQQQQP 452
Query: 115 VSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQG-------VQSN-LVQDSH 162
+++++ AG H + ++ + + + G D QG + SN +V D+
Sbjct: 453 INIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDV-QGDRNLPVLINSNSVVVDNV 511
Query: 163 TTI---------TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR--VESLVNLPIALI 211
I +++ G LY+WG N ++G + +T P++ + S + P+ L
Sbjct: 512 KFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLT-PKKCFINSKDSKPL-LF 569
Query: 212 ACGANHSFVLSK 223
CG + ++ K
Sbjct: 570 TCGEIITIIVEK 581
Score = 128 (50.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 63/237 (26%), Positives = 98/237 (41%)
Query: 58 YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA---S 114
Y+ ++ +TG HS + D G ++T+G G+LG + +S S PK V+ S
Sbjct: 185 YNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLG--HGNLESYSSPKLVEFFQTKPS 242
Query: 115 VSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGEL 174
+ VV G H L LT G V + C G S S+ ++ L +
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSS-----SYYSLPQLINFNIS 297
Query: 175 YTWGNNEYGQMGINNSNTT--------VTKPQRVESLVN-LPIALIACGANHSFVLSKSV 225
Y NN NN+N + Q S N + I ++CG N S V++
Sbjct: 298 YNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDK- 356
Query: 226 SRLYAFGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLV 278
L+ FG G +L + + TP+L+ + M++G SLV + GLV
Sbjct: 357 GLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLV 413
Score = 62 (26.9 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 765 FPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
FP + +K +L + L+DL+ P LA+S + +L ++E+ TF
Sbjct: 1662 FPTSFFKYLLGVKVNLRDLEIYDPQLAQSFKKVLVL--DNIEEYLSTTF 1708
Score = 58 (25.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 983 LNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGG 1042
+++ L++ V R+++V D Q+ FKK +++ ++ +V F+GE+ D GG
Sbjct: 1475 MSESLQLTVRREHLVLDFF----QFF---FKKI----ESNKLFCRLEVSFQGEKGLDLGG 1523
Query: 1043 VRREFLMLLLKE--ILD 1057
+ E LL + I+D
Sbjct: 1524 LSSEMYSLLFSDNQIID 1540
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 166 (63.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 52/188 (27%), Positives = 90/188 (47%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L+ G+VF+WGG HGQLG + + + + P+ ++ L + + + AG
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE--PRLLEALQGLVMAEVAAG----- 218
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD--KKSQSIPKRVKGL-ASVSVVQ 119
G WHS+ +++ G+++ WG + GQL L + + + +++ + L S V+
Sbjct: 219 ------G-WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVK 271
Query: 120 ACAGYSHCLVLTSSGVVTCTHK-ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
G V + GSD V+++ HT + + GELYTWG
Sbjct: 272 RTGGAEDGAPAPFIAVQPFPALLDLPMGSD---AVKASC-GSRHTAVVTRT--GELYTWG 325
Query: 179 NNEYGQMG 186
+YGQ+G
Sbjct: 326 WGKYGQLG 333
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 62 LVLTSTT-GLWHSLALNDCGEVFTWGGDTHGQLGLESAD--KKSQSIPKRVKGL-ASVSV 117
LV+ G WHS+ +++ G+++ WG + GQL L + + + +++ + L S
Sbjct: 210 LVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQ 269
Query: 118 VQACAGYSHCLVLTSSGVVTCTHK-ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYT 176
V+ G V + GSD V+++ HT + + GELYT
Sbjct: 270 VKRTGGAEDGAPAPFIAVQPFPALLDLPMGSD---AVKASC-GSRHTAVVTRT--GELYT 323
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFV 220
WG +YGQ+G + T++ +P+RVE V+ L + + CG +++V
Sbjct: 324 WGWGKYGQLG-HEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYV 368
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/180 (27%), Positives = 88/180 (48%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
G H+L L+ G+VF+WGG HGQLG + + + + P+ ++ L + + + AG H +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE--PRLLEALQGLVMAEVAAGGWHSV 223
Query: 129 VLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQDSHTTI---TSLNSPG-ELYTWGNNEYG 183
++ +G + E+G + P++ NL +D T T LN G ++ G E G
Sbjct: 224 CVSETGDIYIWGWNESGQLALPTR----NLAEDGETVAREATELNEDGSQVKRTGGAEDG 279
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIA----CGANHSFVLSKSVSRLYAFGIGSAVQL 239
+ Q +L++LP+ A CG+ H+ V++++ LY +G G QL
Sbjct: 280 ------APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRT-GELYTWGWGKYGQL 332
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 114 (45.2 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 42/148 (28%), Positives = 66/148 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G + + L D G + T+G ++G LG S SQ P V+ L +VQ G SH L
Sbjct: 399 GDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ--PTIVEALLGYEMVQVACGASHVL 456
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L++ E+F WG G+LGL + ++S S P++V +
Sbjct: 457 ALSTER------------ELFAWGRGDSGRLGLGT--RESHSCPQQVPMPPGQEAQRVVC 502
Query: 123 GYSHCLVLTSSG-VVTC-THKENGCGSD 148
G ++LT G + C +++ N G D
Sbjct: 503 GIDSSMILTVPGQALACGSNRFNKLGLD 530
Score = 109 (43.4 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 30/113 (26%), Positives = 58/113 (51%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
++ + G+ YT+G+N++GQ+G N + P +V+ L + +A++ACG + + S
Sbjct: 575 AVTASGDCYTFGSNQHGQLGTNTRRGS-RAPCKVQGLEGIKMAMVACGDAFTVAIGAE-S 632
Query: 227 RLYAFGIGSAVQL---DSPKSVHKTPQL--IHGPWIASPVAMTAGEDSLVSHS 274
+Y++G G+ +L D + + QL H P+ + V+ G L S
Sbjct: 633 EVYSWGKGARGRLGRRDEDAGLPRPVQLDETH-PYTVTSVSCCHGNTLLAVRS 684
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 145 (56.1 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 60/222 (27%), Positives = 105/222 (47%)
Query: 33 DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS--TTGLWHSLALNDCGEVFTWGGDTH 90
+++ Q + +R G + + AG + C S G HS+A+ GEV+T+G +
Sbjct: 113 EEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTSKGEVYTFGYNNS 172
Query: 91 GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN------- 143
GQLG + +++ P V+ L V ++QA AG + ++++ G V KE+
Sbjct: 173 GQLGHGHTEDEARIQP--VRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYG 230
Query: 144 GCGSDP---SQGVQS--NL--VQDS-HTTITS-LNSPGELYT--WGNNEYGQMGINNSNT 192
G G+ P Q V S N+ VQ + T+ L+ G++YT WGN+ G++G
Sbjct: 231 GQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAA 288
Query: 193 TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
V + L N+P+ IA G + L+ + + + +G
Sbjct: 289 DVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVG 330
Score = 131 (51.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G HS+A+ GEV+T+G + GQLG + +++ P V+ L V ++QA AG +
Sbjct: 149 VAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQP--VRSLQGVRIIQAAAGAAR 206
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
++++ D G+V+ G ++ G+ K + P+ V L ++ VVQA
Sbjct: 207 TMLIS------------DDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQA 254
Query: 121 CAGYSHCLVLTSSGVV 136
G VL+ G V
Sbjct: 255 AIGNYFTAVLSREGKV 270
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G + TWG YG +G N + P+ VE L ++ +A G +FV+S +Y+F
Sbjct: 378 GRVCTWGWGRYGCLGHGNEECE-SVPKVVEGLSHVKAVHVATGDYTTFVVSDD-GDVYSF 435
Query: 232 GIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTA 265
G G + L S + H + SP +T+
Sbjct: 436 GCGESASLGHHPSFDEQGNR-HAN-VLSPTVVTS 467
Score = 64 (27.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGIN-------NSNTTVTKPQRVESL--VNLPIALIA 212
+TT ++ G++Y++G E +G + N + V P V SL VN + I+
Sbjct: 421 YTTFV-VSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQIS 479
Query: 213 CGAN-----HSFVLSKSVSRLYAFGIGSAVQL 239
+ H+F L++S +L+AFG G QL
Sbjct: 480 LTNSIYWNAHTFALTES-GKLFAFGAGDQGQL 510
Score = 60 (26.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 37/156 (23%), Positives = 70/156 (44%)
Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGANHSFVLSKSVSRLYAF 231
+Y+ G G++G + S T P+ +E ++NL ++A GA H+ V+ + R+ +
Sbjct: 326 VYSVGCGLGGKLG-HGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQD-GRVCTW 383
Query: 232 GIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAMTAGEDS--LVSHSGGLVVKKIYSGGDH 288
G G L + P+++ G V + G+ + +VS G + + G+
Sbjct: 384 GWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYS---FGCGES 440
Query: 289 SIVTVTKSSDGVLSDDFRVLNPA--TQILDVNFERL 322
+ + S D + VL+P T + VN ER+
Sbjct: 441 ASLGHHPSFDEQGNRHANVLSPTVVTSLKQVN-ERM 475
Score = 50 (22.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
G H VL+ + VVT + N S + +++ ++HT +L G+L+ +G +
Sbjct: 453 GNRHANVLSPT-VVTSLKQVNERMVQIS--LTNSIYWNAHTF--ALTESGKLFAFGAGDQ 507
Query: 183 GQMG--INNSNTTVTKPQRVE 201
GQ+G + + P++V+
Sbjct: 508 GQLGTELGKNQKERCVPEKVD 528
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 182 (69.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 58/184 (31%), Positives = 93/184 (50%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
G +H + L + G V+TWG +++GQLG D + Q ++++ S+S +Q A S
Sbjct: 341 GNYHIVLLTEGGNVWTWGSNSNGQLGY-LVDTQQQQ-QQQLQQQQSMSSLQPSASSSS-- 396
Query: 129 VLTSSGVVTCTHK--ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
+SS TCT K E C + GV++ +L GELY WG NE+G++G
Sbjct: 397 PSSSSLQTTCTPKMVEIKCVKYIATGVKNT---------AALTEWGELYMWGINEHGELG 447
Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG----IGSAVQLDSP 242
+ ++ T P RV L N ++ IAC + HS ++S ++Y +G G + SP
Sbjct: 448 LGDTIDRRT-PTRVIRLKNEVVSTIACSSTHSACYTES-GKMYVWGQSDETGKIQAIPSP 505
Query: 243 KSVH 246
+H
Sbjct: 506 LPIH 509
Score = 136 (52.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 43/148 (29%), Positives = 78/148 (52%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSV-VQACAGYSH 60
G +H + L + G V+TWG +++GQLG L ++ Q ++ + ++S+ + + S
Sbjct: 341 GNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQPSASSSSPSSS 400
Query: 61 CLVLTST-------------TGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIP 106
L T T TG+ ++ AL + GE++ WG + HG+LGL ++ D+++ +
Sbjct: 401 SLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRV 460
Query: 107 KRVKGLASVSVVQACAGYSHCLVLTSSG 134
R+K VS + AC+ +H T SG
Sbjct: 461 IRLKNEV-VSTI-ACSS-THSACYTESG 485
Score = 53 (23.7 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 16 VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQ--ACAGYSHCLVLTSTTGLW 71
VFT+G ++G LGL + P++V + V+ AC Y H + +T L+
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSY-HTVFVTDDEHLY 60
Score = 49 (22.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 156 NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
NL+ + T + +P L NN+ + NN+N
Sbjct: 1120 NLIDNQKLTQNEITTPPPLQIQNNNQNNNLENNNNN 1155
Score = 40 (19.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 802 EPDLEDVFGITFR 814
+P+ DVF +TFR
Sbjct: 1012 DPNFRDVFLLTFR 1024
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 73/263 (27%), Positives = 119/263 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 75 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL + G VF WG D +G +GL KKS +P +V+ S+ VV+
Sbjct: 131 ----------TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LSMPVVKV 177
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPS--------QGVQSNLV------------ 158
+G H ++LT+ G + T E G G P QG++ LV
Sbjct: 178 ASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 237
Query: 159 -----QDSH--TTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
QD+ T +++S G +Y +G + Y Q+G + + PQ + S N +
Sbjct: 238 GHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFV-PQNLTSFKNSTKSW 296
Query: 211 IA-CGANHSFVLSKSVSRLYAFG 232
+ G H V S R Y+ G
Sbjct: 297 VRFSGGQHHTVCMDSEGRAYSLG 319
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 60/192 (31%), Positives = 93/192 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVK-GLASV--SVVQACAGYSHCLVLTSTTG 69
G V T G GD GQLGL +++ +R K L + +VQA AG G
Sbjct: 35 GLVLTLGQGDV-GQLGL------GENVMERKKPALVPIPEDIVQAEAG-----------G 76
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
+ H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 77 M-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAA 133
Query: 130 LTSSGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGEL 174
LT G V + ++N G +P + VQ L V + + L + GEL
Sbjct: 134 LTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGEL 193
Query: 175 YTWGNNEYGQMG 186
YT G+ E GQ+G
Sbjct: 194 YTLGSGEQGQLG 205
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 167 (63.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 61/216 (28%), Positives = 103/216 (47%)
Query: 37 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
+S P+++ + S S Q CAG +H V+T L+ +N G G HGQLG
Sbjct: 366 KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELY--TWVNMQG-----GTKLHGQLG- 417
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN-GC-GSDPSQGV 153
D+ S PK V+ L ++ Q G + +T G + + GC G D + G
Sbjct: 418 -HGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGS 476
Query: 154 Q-----------SNLVQ-----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
+ +N V+ D+H + + N E+YTWG EYG++G+++ T P
Sbjct: 477 EVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNR--EVYTWGCGEYGRLGLDSEEDHYT-P 533
Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
Q+V+ L I + CG + +F+L+++ ++ A G+
Sbjct: 534 QKVDVPKTLNIVSVHCGCDGTFLLTQT-GKVLACGL 568
Score = 139 (54.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 54/227 (23%), Positives = 106/227 (46%)
Query: 103 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPS-- 150
+S P+++ + S S Q CAG +H V+T + T H + G G S
Sbjct: 366 KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYR 425
Query: 151 --------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS-NTTVTKPQRVE 201
QG V + G+LY +G++ YG +GI+ + + V +P +++
Sbjct: 426 QPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLD 485
Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS--AVQLDSPKSVHKTPQLIHGPWIAS 259
+ P+ ++CG NH VL+++ +Y +G G + LDS + H TPQ + P +
Sbjct: 486 FFLTNPVEQVSCGDNHVAVLTRN-REVYTWGCGEYGRLGLDSEED-HYTPQKVDVPKTLN 543
Query: 260 PVAMTAGEDS--LVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDD 304
V++ G D L++ +G ++ + + + + + + + G+++ D
Sbjct: 544 IVSVHCGCDGTFLLTQTGKVLACGL---NEFNKLGLNQCTSGIINHD 587
>DICTYBASE|DDB_G0290179 [details] [associations]
symbol:ube3a "ubiquitin-protein ligase E3A"
species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 dictyBase:DDB_G0290179 GenomeReviews:CM000154_GR
GO:GO:0005622 GO:GO:0006511 GO:GO:0004842 EMBL:AAFI02000158
SUPFAM:SSF56204 eggNOG:COG5021 KO:K10587 RefSeq:XP_635863.1
ProteinModelPortal:Q54GG5 EnsemblProtists:DDB0302447 GeneID:8627519
KEGG:ddi:DDB_G0290179 OMA:QFISVRI Uniprot:Q54GG5
Length = 720
Score = 177 (67.4 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 949 AKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT 1008
A ++ Q +Q+EHA+ Q + + +L ++ R+++++DT+ ++
Sbjct: 333 AVLNVITKGQYLQIEHALTQNSLRTQFGQMGITSAADFLIFKIRREHLIDDTLDKVQTLR 392
Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
+ K L+ +V F GEE D GGV+REF L++++I DP+YGMFK
Sbjct: 393 EENRKSELRKE--------LKVHFMGEEGIDEGGVKREFFQLIVRKIFDPEYGMFKYNTT 444
Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
T WF+ D+ D + LIG
Sbjct: 445 TNCFWFNPDSV-DYTEFELIG 464
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ +Y T + WF+ D+ D LIG + GLA+YN I+++ FPL ++KK+L+ +
Sbjct: 436 YGMFKYNTTTNCFWFNPDSV-DYTEFELIGIIIGLALYNNIILDVHFPLVIFKKLLNLDL 494
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLED---VFGITFRNWY 817
++D++ L P + +S I E D+ D F T+ + Y
Sbjct: 495 TMEDIESLDPEVYQSFIKIKTTEE-DVSDWSLYFCATYESIY 535
Score = 37 (18.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 864 QVLQKLNSLNNETLTSSISAGGRTVSN 890
++ L SL+N+ + + R +SN
Sbjct: 158 KIFNLLLSLDNDRINDELQKASRQLSN 184
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 58/215 (26%), Positives = 91/215 (42%)
Query: 5 WH-SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W ++ L + G+V + G + GQLG+ +K +P+ ++ L VV AG H L
Sbjct: 110 WDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALA 167
Query: 64 LTSTTGLWH-SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
T+T ++ L G G + L L K+ P RV GL + + V A A
Sbjct: 168 TTATGSVFQWGTGLASSGRRLCPGQN----LPLFLTAKE----PSRVTGLENSTAVCAVA 219
Query: 123 GYSHCLVLTSSG--VVTCTHKENGCGSD----P-SQGVQSNLVQDSHTT--------ITS 167
G H LT +G V +K S P Q ++++ QD T + +
Sbjct: 220 GSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVA 279
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES 202
G+++TWG +YGQ+G KP +S
Sbjct: 280 KTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDS 314
Score = 132 (51.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 40/144 (27%), Positives = 65/144 (45%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G HS +L D GE++ WG + HGQL + +P+R++ A Y
Sbjct: 218 VAGSDHSASLTDTGELYVWGRNKHGQLASRAV---FLPLPQRIE-----------AHYFQ 263
Query: 61 CLVLTSTTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
+T+ W H +A + G+VFTWG +GQLG ++Q ++ LA
Sbjct: 264 DEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQN 323
Query: 120 ACAGYSHCLVLTSSGVVTCTHKEN 143
+ HCL T + ++C + N
Sbjct: 324 SVPSPLHCL--TGATEISCGSEHN 345
Score = 124 (48.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H+LA G VF WG GL S+ ++ Q++P + V G
Sbjct: 161 GLRHALATTATGSVFQWG------TGLASSGRRLCPGQNLPLFLTAKEPSRVT----GLE 210
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + + G HS +L D GE++ WG + HGQL + +P+R++ V
Sbjct: 211 NSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAV---FLPLPQRIEAHYFQDEKV 267
Query: 118 VQACAGYSHCLVLTSSGVV 136
+G++H + T +G V
Sbjct: 268 TAVWSGWTHLVAKTETGKV 286
Score = 122 (48.0 bits), Expect = 0.00076, P = 0.00076
Identities = 53/223 (23%), Positives = 94/223 (42%)
Query: 82 VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSSG-VVTC- 138
+F WG +++GQLGL K+ +P+++ +++ G H V+T G + C
Sbjct: 17 LFAWGANSYGQLGL--GHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCG 74
Query: 139 THKEN--GCGSD----------PSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
+K+ G G P +G V L G++ + G+N +GQ+G
Sbjct: 75 LNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLG 134
Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
+ + PQ +E L + +A G H+ + + S ++ +G G A S +
Sbjct: 135 VPHGPRKCVVPQAIECLRE-KVVCVAAGLRHALATTATGS-VFQWGTGLA---SSGR--- 186
Query: 247 KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
+L G + P+ +TA E S V+ +G DHS
Sbjct: 187 ---RLCPGQNL--PLFLTAKEPSRVTGLENSTAVCAVAGSDHS 224
Score = 110 (43.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 16 VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
+F WG +++GQLGL K+ +P+++ +++ G G HS
Sbjct: 17 LFAWGANSYGQLGL--GHKEDVFLPQQLSDFCQAGCIKSVTG-----------GGGHSAV 63
Query: 76 LNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
+ D G++F G + GQLGL ++ + +I K ++G V AC G+ ++LT G
Sbjct: 64 VTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQV--AC-GWDFTIMLTEKG 120
Query: 135 -VVTC 138
V++C
Sbjct: 121 QVLSC 125
Score = 78 (32.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLP--IALIACGANHSFVL 221
+WG NE+G G + + + V P V++L P + L+ CGA HS +
Sbjct: 355 SWGWNEHGMCG-DGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAV 401
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 160 (61.4 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 66/246 (26%), Positives = 109/246 (44%)
Query: 6 HSLALNDCGEVFTWGGDT-HGQLGLESADKKSQ----SIPKRVKGLASVSVVQACAGYSH 60
H+ A+ + GE++ WG + G+LGL ++ S+P +VK L +C G+
Sbjct: 215 HTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGF-- 272
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ- 119
++AL G+++ WG +++ +LG D P V L V + Q
Sbjct: 273 -----------FTMALTKEGQLWNWGANSNYELG--RGDNLGGWEPMPVPSLEGVRITQI 319
Query: 120 ACAGYSHCLVLTSSG-VVTCTHKENG-CGSDP--SQGVQSNL----------VQDSHTTI 165
AC GY H L LT G V++ H +G GS +Q V + + + ++
Sbjct: 320 ACGGY-HSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSS 378
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN----LP--IALIACGANHSF 219
++ GEL+ WGN + Q+G+ T P V L P + I+ GA+H+
Sbjct: 379 AAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHAL 438
Query: 220 VL-SKS 224
L S+S
Sbjct: 439 CLVSRS 444
Score = 151 (58.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 42/133 (31%), Positives = 65/133 (48%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
G + ++AL G+++ WG +++ +LG D P V L V + Q AC GY
Sbjct: 270 GGFFTMALTKEGQLWNWGANSNYELG--RGDNLGGWEPMPVPSLEGVRITQIACGGY--- 324
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
HSLAL + G+V +WG HGQLG S+ ++Q +P ++ LA +V
Sbjct: 325 ----------HSLALTEEGKVLSWGHGGHGQLG--SSSLRNQKVPTEIEALADKKIVFIA 372
Query: 122 AGYSHCLVLTSSG 134
+G S +T G
Sbjct: 373 SGGSSSAAITDGG 385
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/136 (32%), Positives = 63/136 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSLAL + G+V +WG HGQLG S+ ++Q +P ++ LA +V +G S
Sbjct: 322 GGYHSLALTEEGKVLSWGHGGHGQLG--SSSLRNQKVPTEIEALADKKIVFIASGGSS-- 377
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS------ 116
S A+ D GE++ WG QLG+ + Q+ P V L
Sbjct: 378 ----------SAAITDGGELWMWGNAKDFQLGVPGLPE-IQTTPVEVNFLTEEDECQPHK 426
Query: 117 VVQACAGYSHCLVLTS 132
V+ G SH L L S
Sbjct: 427 VISISIGASHALCLVS 442
Score = 122 (48.0 bits), Expect = 0.00072, P = 0.00072
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
GL+HS L G+++ WG G+LG + S +P S+ G H +
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDGGRLGF--GQENSVFVPNLNPLFEEHSIRCIALGGLHSV 165
Query: 129 VLTSSGVVTCTHKENGCGS---------------DPSQGVQSNLVQDSHTTITSLNSPGE 173
LT G V T G G+ D S + + + S T ++ GE
Sbjct: 166 ALTHQGDVF-TWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE 224
Query: 174 LYTWGNNEY-GQMGIN-----NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
LY WG E G++G+ N ++ P +V++L +P+A ++CG + L+K +
Sbjct: 225 LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKE-GQ 282
Query: 228 LYAFGIGSAVQL 239
L+ +G S +L
Sbjct: 283 LWNWGANSNYEL 294
Score = 110 (43.8 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 41/144 (28%), Positives = 62/144 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL+HS L G+++ WG G+LG + S +P S+ C+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDGGRLGF--GQENSVFVPNLNPLFEEHSI--------RCI 157
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
L GL HS+AL G+VFTWG G LG + + + +P+RV +
Sbjct: 158 ALG---GL-HSVALTHQGDVFTWGYGGFGALGHKVYTR--ELVPRRVDDSWDCKISAIAT 211
Query: 123 GYSHCLVLTSSGVVTCTHKENGCG 146
+H +T SG + +E G G
Sbjct: 212 SGTHTAAITESGELYMWGREEGDG 235
Score = 99 (39.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L G+L+ WG N ++G N +P V SL + I IACG HS L++
Sbjct: 276 ALTKEGQLWNWGANSNYELG-RGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEE-G 333
Query: 227 RLYAFGIGSAVQLDS 241
++ ++G G QL S
Sbjct: 334 KVLSWGHGGHGQLGS 348
Score = 72 (30.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 34/130 (26%), Positives = 52/130 (40%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA-----SVSVVQACAGY---SHCLVLTS 66
++F+WG GQLG ++ + P V L S S+ Q S +
Sbjct: 49 QLFSWGRGASGQLG--GGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGI 106
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
+ GL+HS L G+++ WG G+LG + S +P S+ G H
Sbjct: 107 SCGLFHS-GLTIDGDLWIWGKGDGGRLGF--GQENSVFVPNLNPLFEEHSIRCIALGGLH 163
Query: 127 CLVLTSSGVV 136
+ LT G V
Sbjct: 164 SVALTHQGDV 173
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 113 (44.8 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 48/166 (28%), Positives = 72/166 (43%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L D G + T+G ++G LG S + SQ P V+ L +VQ G SH L L++
Sbjct: 414 LTDRGIIMTFGSGSNGCLGHGSLNDISQ--PTIVEALLGYEMVQVACGASHVLALSTER- 470
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
E+F WG G+LGL + ++S P+ V + G ++
Sbjct: 471 -----------ELFAWGRGDGGRLGLGT--RESHCCPQLVPMPPGQEAQRVVCGIDSSMI 517
Query: 130 LTSSG-VVTC-THKENGCGSDP-SQGVQSNLVQ--DSHTTITSLNS 170
LT G + C +++ N G DP S G + Q + T T L S
Sbjct: 518 LTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGS 563
Score = 102 (41.0 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L + G+ YT+G+N++GQ+G N+ P RV+ L + I+ +ACG + +
Sbjct: 584 LTASGDCYTFGSNQHGQLG-TNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAE-GE 641
Query: 228 LYAFGIGSAVQL---DSPKSVHKTPQL--IHGPWIASPVAMTAGEDSL 270
++++G G+ +L D + + QL H P+ + V+ G L
Sbjct: 642 VFSWGKGARGRLGRKDEDAGLPRPVQLDETH-PYTVTSVSCCHGNTLL 688
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 134 (52.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 45/174 (25%), Positives = 77/174 (44%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG H +AL G+V+TWG QLG +++ R++GL Q A +
Sbjct: 233 TGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERR------RLQGLTP----QPLALKN-- 280
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI---PKRVKGLASVSVV 118
+++ G +HS A+++ G V+ WG + Q G+E D++ ++ P V L +V
Sbjct: 281 -IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVK 339
Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSD-PSQGVQSNLVQDSHTTITSLNSP 171
G H L L G V +++ P + +V+D L++P
Sbjct: 340 SITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTP 393
Score = 77 (32.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 29/123 (23%), Positives = 54/123 (43%)
Query: 155 SNLVQ---DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
+N++Q +H + ++ S G++Y+WG+ E ++G +++ V P V S +A+
Sbjct: 400 TNVIQVVCGTHHNL-AVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIR 458
Query: 212 ACGANHSFVLSKSVSRL----YAFGIGSAVQLDSPKSVHKTPQLIHGPWI-ASPVAMTAG 266
GA F + + A GI S + + +T + P A P + G
Sbjct: 459 VAGAGGQFSIIAGIPNASEEPVANGIKSEPENEKKLKTEETSKTDDSPVTDAKPDVTSNG 518
Query: 267 EDS 269
E S
Sbjct: 519 EPS 521
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 119 (46.9 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQACAGYS 59
+G H+L L + G +++WG G LG + S DK++ PK++ +
Sbjct: 252 SGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFT--------LNNN 303
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL----ASV 115
++ G +HS+ L + E++T+G GQLG D + IPKR+K A
Sbjct: 304 ESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGN 363
Query: 116 SVVQACAG-YSHCLVLTSSGVV 136
+ AG +++ +T+ G V
Sbjct: 364 KIKSIFAGDHANSFYITTDGSV 385
Score = 96 (38.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 42/157 (26%), Positives = 70/157 (44%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESA--DKKSQ-SIPKRVKGLAS-VSVVQACA 56
++G HSL + ++ WG + QLG DK S S P + + + V++
Sbjct: 182 VSGYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETD 241
Query: 57 G-YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLA 113
+ + S G H+L L + G +++WG G LG + S DK++ PK++
Sbjct: 242 PIFKDFKKICS--GSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFT 299
Query: 114 ----SVSVVQ-ACAGYSHCLVLTSSG-VVTCTHKENG 144
+V AC GY H + LT+ + T + E G
Sbjct: 300 LNNNESRIVDIACGGY-HSMFLTNDNEIYTFGYGEFG 335
Score = 92 (37.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
H + + G +Y+WG N+ G +G + +N P++++SL N I I G H+ L
Sbjct: 373 HANSFYITTDGSVYSWGWNDGGSLG-HGTNENHYSPKKIQSLSN--IKKITSGFKHT--L 427
Query: 222 SKSVSR-LYAFG 232
++S++ +Y FG
Sbjct: 428 AQSINNDIYVFG 439
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 159 (61.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 72/263 (27%), Positives = 117/263 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V V+Q AG SH
Sbjct: 75 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVD--LQEKVIQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL + G VF WG D +G +GL KKS +P +V+ SV VV+
Sbjct: 131 ----------TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LSVPVVKV 177
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPS--------QGVQSNLV------------ 158
+G H ++LT G + T E G G P QG++ LV
Sbjct: 178 ASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 237
Query: 159 -----QDSH--TTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
QD+ T +++S G +Y +G + Y Q+G + + PQ + S N +
Sbjct: 238 GHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFV-PQNLTSFKNSTKSW 296
Query: 211 IA-CGANHSFVLSKSVSRLYAFG 232
+ G H V S + Y+ G
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLG 319
Score = 125 (49.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 59/192 (30%), Positives = 92/192 (47%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVK-GLASV--SVVQACAGYSHCLVLTSTTG 69
G V T G GD GQLGL +++ +R K L S+ +VQA AG G
Sbjct: 35 GVVLTLGQGDV-GQLGL------GENVMERKKPALVSIPEDIVQAEAG-----------G 76
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
+ H++ L+ G+V+++G + G LG +++ + S+ +P +V V+Q AG SH
Sbjct: 77 M-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVD--LQEKVIQVSAGDSHTAA 133
Query: 130 LTSSGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGEL 174
LT G V + ++N G +P + VQ L V + + L G+L
Sbjct: 134 LTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDL 193
Query: 175 YTWGNNEYGQMG 186
YT G+ E GQ+G
Sbjct: 194 YTLGSGEQGQLG 205
Score = 47 (21.6 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
R++A+G+G+ QL + + W SPV MT + L + VV + SGG
Sbjct: 365 RVFAWGMGTNYQLGTGQD--------EDAW--SPVEMTGKQ--LENR----VVLTVSSGG 408
Query: 287 DHSIVTV 293
H+++ V
Sbjct: 409 QHTVLLV 415
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 78/289 (26%), Positives = 118/289 (40%)
Query: 5 WH-SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W ++ L G V G + GQLG+ SA+K + P +K V AG H L
Sbjct: 132 WDFTIILTGDGLVLACGSNAFGQLGV-SAEKTHSAEPLLLKSFHE-PVTSVAAGLRHALA 189
Query: 64 LTSTTGLWH-SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
T++ ++ L+ + L S P V G A V+ + A
Sbjct: 190 STASGCVYQWGTGLSSHAKRMLNPQPVPSHL--------SSKEPCLVPGFAHVTTQKVIA 241
Query: 123 GYSHCLVLTSSGVV----TCTHKENGCGS---------DPSQGVQSNLVQDSHTTITSL- 168
G +HC LT +G + + H + GS D S +Q V D H+ T L
Sbjct: 242 GSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLPVALDRSM-LQDERVSDVHSGWTHLV 300
Query: 169 --NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPI---AL-----IACGANHS 218
G ++TWG + YGQ+G +N ++ K E LV P+ AL I+CG+ H+
Sbjct: 301 AQTESGRVFTWGRSNYGQLG--QTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHN 358
Query: 219 FVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAG 266
L+ R++++G D PQ I P +A VA+ G
Sbjct: 359 --LAVVGGRVFSWGWNEHGMCGDGSLQDITQPQPI--PALADAVALLIG 403
Score = 134 (52.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G H +A + G VFTWG +GQLG + + QS + + + S V+A G +
Sbjct: 294 SGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHL--VRSPVEVKALFGATQI 351
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA-SVSVVQA 120
+ G H+LA+ G VF+WG + HG G S +Q P+ + LA +V+++
Sbjct: 352 -----SCGSEHNLAVVG-GRVFSWGWNEHGMCGDGSLQDITQ--PQPIPALADAVALLIG 403
Query: 121 CAGYSHCLVLTS 132
C G H + L S
Sbjct: 404 C-GAGHSMALCS 414
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 71/288 (24%), Positives = 126/288 (43%)
Query: 10 LNDCGEV-FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
L+ C + +TWG +++GQLG +A+ +++ P+RV+ ++A G
Sbjct: 32 LSKCVSLLYTWGANSYGQLGQGNAEDQAE--PRRVESGLQEEQIRAVTG----------- 78
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKS-QSIPKRVKGLASVSVVQACAGYSH 126
G HS ++D GE+ G + GQLGL + + + Q+ P + G V V +C G+
Sbjct: 79 GGGHSALISDSGELLVCGQNHKGQLGLGHTLEIMTFQTCP--LPGFGRVQQV-SC-GWDF 134
Query: 127 CLVLTSSGVV-TCTHK---ENGCGSDPSQGVQSNLVQDSHTTITSL----------NSPG 172
++LT G+V C + G ++ + + L++ H +TS+ + G
Sbjct: 135 TIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVTSVAAGLRHALASTASG 194
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
+Y WG G+++ + PQ V S ++ + G H +
Sbjct: 195 CVYQWGT------GLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCAC 248
Query: 233 IGSAVQLDSPKSVHKTPQLIHGP-WIASPVAMTAG--EDSLVS--HSG 275
+ +L S +K QLI G ++ PVA+ +D VS HSG
Sbjct: 249 LTVNGELFLWGS-NKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSG 295
Score = 105 (42.0 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 43/146 (29%), Positives = 61/146 (41%)
Query: 3 GLWHSLALNDCGEVFTWG-G-DTHGQLGLESADKKSQSIPKR---VKGLASVSVVQACAG 57
GL H+LA G V+ WG G +H + L S K V G A V+ + AG
Sbjct: 183 GLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAG 242
Query: 58 YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV 117
+HC LT +N GE+F WG + HGQL + + + L V
Sbjct: 243 SAHCACLT----------VN--GELFLWGSNKHGQL-ISGSLFLPLPVALDRSMLQDERV 289
Query: 118 VQACAGYSHCLVLTSSGVVTCTHKEN 143
+G++H + T SG V + N
Sbjct: 290 SDVHSGWTHLVAQTESGRVFTWGRSN 315
Score = 104 (41.7 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
G +++WG NE+G G + S +T+PQ + +L + LI CGA HS L
Sbjct: 364 GRVFSWGWNEHGMCG-DGSLQDITQPQPIPALADAVALLIGCGAGHSMAL 412
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 150 (57.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 44/134 (32%), Positives = 71/134 (52%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 75 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL D G VF WG D +G +GL KKS +P +V+ V VV+
Sbjct: 131 ----------TAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LDVPVVKV 177
Query: 121 CAGYSHCLVLTSSG 134
+G H ++LT+ G
Sbjct: 178 ASGNDHLVMLTADG 191
Score = 127 (49.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 61/192 (31%), Positives = 93/192 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVK-GLASV--SVVQACAGYSHCLVLTSTTG 69
G V T G GD GQLGL +++ +R K L S+ VVQA AG G
Sbjct: 35 GLVLTLGQGDV-GQLGL------GENVMERKKPALVSIPEDVVQAEAG-----------G 76
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
+ H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 77 M-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAA 133
Query: 130 LTSSGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGEL 174
LT G V + ++N G +P + VQ L V + + L + G+L
Sbjct: 134 LTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDL 193
Query: 175 YTWGNNEYGQMG 186
YT G E GQ+G
Sbjct: 194 YTLGCGEQGQLG 205
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00081
Identities = 55/181 (30%), Positives = 82/181 (45%)
Query: 80 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVKGLASV--SVVQACAGYSHCLVLTSSGVV 136
G V T G GD GQLGL + ++ L S+ VVQA AG H + L+ SG V
Sbjct: 35 GLVLTLGQGDV-GQLGLGE-----NVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQV 88
Query: 137 TC--THKENGCGSDPS-QG---------VQSNLVQ----DSHTTITSLNSPGELYTWGN- 179
+ E G D S +G +Q +VQ DSHT +L G ++ WG+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTA--ALTDDGRVFLWGSF 146
Query: 180 -NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
+ G +G+ P +V+ +++P+ +A G +H +L+ LY G G Q
Sbjct: 147 RDNNGVIGLLEPMKKSMVPVQVQ--LDVPVVKVASGNDHLVMLTAD-GDLYTLGCGEQGQ 203
Query: 239 L 239
L
Sbjct: 204 L 204
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 78/310 (25%), Positives = 138/310 (44%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G H++ L+D G V+T+G + G LG +++++ S+++P +V L ++Q AG SH
Sbjct: 73 VAGGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVD-LGE-KIIQVSAGDSH 130
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
S AL + G V+ WG D +G +GL KK ++P +V VV
Sbjct: 131 ------------SAALTEDGGVYVWGSFRDNNGVIGLLEPMKKC-TVPVKVP--IDKPVV 175
Query: 119 QACAGYSHCLVLTSSG-VVT--C----------THKENGCGS-------DPS------QG 152
+ +G H ++LT+ G + T C H N G +P +G
Sbjct: 176 KIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRG 235
Query: 153 --VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
V +++ ++ T +++ G +Y +G + Y Q+G ++NT P ++ S N +
Sbjct: 236 KVVFTDVFCGAYFTF-AVSKEGHVYGFGLSNYHQLGTQSTNTCFV-PVKLSSFKNSTTSW 293
Query: 211 IA-CGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV-HKT-PQLIHGPWIASPVAMTAGE 267
+ G H + S + Y+ G +L K V K+ P ++ G VA A
Sbjct: 294 VGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQVVACGASV 353
Query: 268 DSLVSHSGGL 277
V+ G +
Sbjct: 354 SYAVTKQGSV 363
Score = 131 (51.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 56/189 (29%), Positives = 86/189 (45%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
G V G GD GQLGL D + P V +VQA AG G+ H
Sbjct: 35 GLVLVLGQGDV-GQLGL-GEDVMERKKPALVT--LPEGIVQAVAG-----------GM-H 78
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
++ L+D G V+T+G + G LG +++++ S+++P +V L ++Q AG SH LT
Sbjct: 79 TVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVD-LGE-KIIQVSAGDSHSAALTE 136
Query: 133 SGVVTC--THKENG-----------CGSDPSQGVQSNLVQ--DSHTTITSLNSPGELYTW 177
G V + ++N C + +V+ + + L + GELYT
Sbjct: 137 DGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTS 196
Query: 178 GNNEYGQMG 186
G E GQ+G
Sbjct: 197 GCGEQGQLG 205
Score = 42 (19.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 228 LYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
++++G+G+ +QL + + + W SPV MT + L + VV + SGG
Sbjct: 363 VFSWGMGTNLQLGTGEEEDE--------W--SPVEMTGKQ--LENR----VVLSVSSGGQ 406
Query: 288 HSIVTV 293
H+++ V
Sbjct: 407 HTVLLV 412
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 144 (55.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + D G +F G + GQLGL ++ P K L ++ Q G+ ++LT
Sbjct: 60 HSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILT 117
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQL--GLESADKKSQSIPKRVK----GLASVSVVQ 119
G S N G++ G + +E +K SI ++ AS +V Q
Sbjct: 118 EN-GQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQ 176
Query: 120 -----ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGEL 174
A +G C T +T G + SQ V L H+ SL GEL
Sbjct: 177 WGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAV-CVLAGSDHSA--SLTDAGEL 233
Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGANHSFVLSKSVSRLYAFG 232
Y WG+N++GQ+ + + PQR+E+ N IA + G H V +++ +G
Sbjct: 234 YVWGSNKHGQLA--SQAAFLLLPQRIEARCFQNEKIAAVWSGWTH-LVAQTVTGKVFTWG 290
Query: 233 IGSAVQL 239
QL
Sbjct: 291 RADYGQL 297
Score = 136 (52.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 73/302 (24%), Positives = 125/302 (41%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S A+ +F WG +++GQLGL K+ L++ + C S C +
Sbjct: 8 SEAVPTAAALFAWGANSYGQLGL--GHKEDV--------LSAQQLSDFCK--SGC-IKRI 54
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
T G HS + D G +F G + GQLGL ++ P K L ++ Q G+
Sbjct: 55 TGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDF 112
Query: 127 CLVLTSSG-VVTC---THKENGCGSDPSQGV--QS-NLVQDSHTTITS-------LNSPG 172
++LT +G V++C + + G P + V Q+ L+++ +I + + G
Sbjct: 113 TIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASG 172
Query: 173 ELYTWGNN--EYGQMGINNSNT----TVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
++ WG G+ T +P V L N + G++HS L+ +
Sbjct: 173 TVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDA-G 231
Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASP--VAMTAGEDSLVSHSGGLVVKKIYS 284
LY +G QL S + PQ I + A+ +G LV+ + V K+++
Sbjct: 232 ELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQT---VTGKVFT 288
Query: 285 GG 286
G
Sbjct: 289 WG 290
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSVVQACAGY 58
+ G HS +L D GE++ WG + HGQL ++A +P+R++ + + +G+
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAA---FLLLPQRIEARCFQNEKIAAVWSGW 274
Query: 59 SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
+H + T T G+VFTWG +GQLG ++ K+ L S
Sbjct: 275 THLVAQTVT------------GKVFTWGRADYGQLGRTVETREGWESEKQDPSLPG-SGP 321
Query: 119 QACAGYSHCL-VLTSSGVVTCTHKEN 143
Q G CL LT + ++C + N
Sbjct: 322 QK--GTPSCLPCLTGATEISCGSEHN 345
Score = 126 (49.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 38/139 (27%), Positives = 65/139 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H+LA G VF WG GL S+ ++ Q++P + +V G
Sbjct: 161 GLRHALAATASGTVFQWG------TGLASSGRRLCPGQTLPLFLTAKEPSTVT----GLE 210
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + G HS +L D GE++ WG + HGQL ++A +P+R++ + +
Sbjct: 211 NSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAA---FLLLPQRIEARCFQNEKI 267
Query: 118 VQACAGYSHCLVLTSSGVV 136
+G++H + T +G V
Sbjct: 268 AAVWSGWTHLVAQTVTGKV 286
Score = 121 (47.7 bits), Expect = 0.00098, P = 0.00098
Identities = 61/233 (26%), Positives = 97/233 (41%)
Query: 73 SLALNDCGEVFTWGGDTHGQLGLE------SADK-----KSQSIPKRVKGLASVSVVQAC 121
S A+ +F WG +++GQLGL SA + KS I KR+ G S V
Sbjct: 8 SEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCI-KRITGGGGHSAVVTD 66
Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD-----SHTTITSLNSPGELYT 176
G L G + H E P + + +Q T I + N G++ +
Sbjct: 67 EGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTEN--GQVLS 124
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
G+N +GQ+G+ + PQ +E L+ + IA G H+ + S ++ +G G A
Sbjct: 125 CGSNSFGQLGVPHGPRRCVIPQAIE-LLREKVVSIAAGLRHALAATAS-GTVFQWGTGLA 182
Query: 237 VQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
S + +L G + P+ +TA E S V+ + +G DHS
Sbjct: 183 ---SSGR------RLCPGQTL--PLFLTAKEPSTVTGLENSQAVCVLAGSDHS 224
Score = 81 (33.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/105 (31%), Positives = 46/105 (43%)
Query: 146 GSDPSQGVQSNLVQDSHTTITSLNSP-------GELYTWGNNEYGQMGINNSNTTVTKPQ 198
GS P +G S L + T S S G ++WG NE+G G + + V P+
Sbjct: 318 GSGPQKGTPSCLPCLTGATEISCGSEHNLAVIGGVCHSWGWNEHGMCG-DGTEADVWAPK 376
Query: 199 RVESLVNLPIAL-IACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
V L + L + CGA HS L + + L A G +V SP
Sbjct: 377 PVPGL-RFFLGLHVGCGAGHSLALCQ-LPALPALGQHPSVTSPSP 419
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 158 (60.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 65/252 (25%), Positives = 106/252 (42%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G++ +G +G + K+ + + L AG V++ + HS
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAA-HS 162
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
L + G++++WG + GQLG D K P+ ++GL+ +V A G +H L LT +
Sbjct: 163 LLITTEGKLWSWGRNEKGQLG--HGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 220
Query: 134 GVVTCTHKENGCGS----DPSQGVQSNL-VQDSHTTITSL----------NSPGELYTWG 178
G V EN G + + V S + + IT + + G LY++G
Sbjct: 221 GSVFA-FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFG 279
Query: 179 NNEYGQMGINNSNTTVTKPQRVE---SLVNLPIALIACGANHSFVLS--KSVSRLYAFGI 233
EYGQ+G N+ + + QR+E LV +A+ +L V R A G
Sbjct: 280 CPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGA 339
Query: 234 GSAVQLDSPKSV 245
+ LDS K V
Sbjct: 340 NHTLVLDSQKRV 351
Score = 123 (48.4 bits), Expect = 0.00071, P = 0.00071
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSL + G++++WG + GQLG D K P+ ++GL+ +V A G +H L LT
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLG--HGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
T G VF +G + GQLGL + S P ++ AC G
Sbjct: 219 ET------------GSVFAFGENKMGQLGLGNQTDAVPS-PAQIMYNGQPITKMAC-GAE 264
Query: 126 HCLVLTSSG 134
+++ G
Sbjct: 265 FSMIMDCKG 273
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 72/263 (27%), Positives = 117/263 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 92 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 147
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL D G VF WG D +G +GL KKS +P +V+ V VV+
Sbjct: 148 ----------TAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LDVPVVKV 194
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPS--------QGVQSNLV------------ 158
+G H ++LT+ G + T E G G P QG++ LV
Sbjct: 195 ASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 254
Query: 159 -----QDSH--TTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
QD+ T +++ G +Y +G + Y Q+G + + PQ + S N +
Sbjct: 255 GHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI-PQNLTSFKNSTKSW 313
Query: 211 IA-CGANHSFVLSKSVSRLYAFG 232
+ G H V S + Y+ G
Sbjct: 314 VGFSGGQHHTVCMDSEGKAYSLG 336
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 61/192 (31%), Positives = 93/192 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVK-GLASV--SVVQACAGYSHCLVLTSTTG 69
G V T G GD GQLGL +++ +R K L S+ VVQA AG G
Sbjct: 52 GLVLTLGQGDV-GQLGL------GENVMERKKPALVSIPEDVVQAEAG-----------G 93
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
+ H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 94 M-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAA 150
Query: 130 LTSSGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGEL 174
LT G V + ++N G +P + VQ L V + + L + G+L
Sbjct: 151 LTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDL 210
Query: 175 YTWGNNEYGQMG 186
YT G E GQ+G
Sbjct: 211 YTLGCGEQGQLG 222
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 76/293 (25%), Positives = 126/293 (43%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L D G + T+G ++G LG + SQ P V+ L +VQ G SH L L++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGGLNDISQ--PTIVEALLGYEMVQVACGASHVLALSTER- 468
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
E+F WG G+LGL + ++S S P++V + G ++
Sbjct: 469 -----------ELFAWGRGDGGRLGLGT--RESHSCPQQVPMPPGQEAQRVICGIDSSVI 515
Query: 130 LTSSG-VVTC-THKENGCGSDP-SQGVQSNLVQDSHTTI--TSLNS-P------------ 171
LT G + C +++ N G D S G + L Q + T L S P
Sbjct: 516 LTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLG 575
Query: 172 ----------GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
G+ YT+G+N++GQ+G N+ P +V+ L + IA++ACG + +
Sbjct: 576 TAHSAAVTASGDCYTFGSNQHGQLG-TNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAI 634
Query: 222 SKSVSRLYAFGIGSAVQL---DSPKSVHKTPQLIHG-PWIASPVAMTAGEDSL 270
+Y++G G+ +L D ++ + QL P+ + V+ G L
Sbjct: 635 GAE-GEVYSWGKGARGRLGRRDEDAALPRPVQLDETQPYTVTSVSCCHGNTLL 686
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 178 (67.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 70/235 (29%), Positives = 103/235 (43%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
H+ + + G++F +G + GQLGL + K + + P VK L S V G +H LV T
Sbjct: 47 HTALVTENGKLFMFGSNNWGQLGLGT--KTTVNKPTCVKALKSERVKLTACGRTHTLVFT 104
Query: 132 SSG-VVTCTHKENG------CGSDPS---------QGVQSNLVQDSHTTITSLNSPGELY 175
S G + C G C S QG L S+T+ +L G LY
Sbjct: 105 SRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTS-AALTQDGRLY 163
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
WG+N GQ+G+ + +T PQ V V + ++CG HS ++ LY FG
Sbjct: 164 MWGDNSEGQIGLGKESNALT-PQEVS--VGKRVFWVSCGYYHSAFVTVD-GALYTFGEKD 219
Query: 236 AVQLD-SPKSV--HKTPQLIHG-PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
+ +L S + + HK PQ + P VA G H+ L ++YS G
Sbjct: 220 SGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGG------HTVALTENEVYSFG 268
Score = 172 (65.6 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 67/246 (27%), Positives = 112/246 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H+ + + G++F +G + GQLGL + K + + P VK L S V G +H LV T
Sbjct: 47 HTALVTENGKLFMFGSNNWGQLGLGT--KTTVNKPTCVKALKSERVKLTACGRTHTLVFT 104
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKS----QSIPKR--VKGLASVSVV 118
S G ++ GG+ GQLGL + D+ S + K+ +K LA+ S
Sbjct: 105 SR------------GNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNT 152
Query: 119 QACAGYSHCLVL---TSSGVVTCTHKENGCG-SDPSQGVQSNLVQDSHTTITSLNSPGEL 174
A L + S G + + N + S G + V + + G L
Sbjct: 153 SAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVDGAL 212
Query: 175 YTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
YT+G + G++G++ K PQ+V + + + +ACG H+ L+++ +Y+FG+
Sbjct: 213 YTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR-VVQVACGGGHTVALTEN--EVYSFGL 269
Query: 234 GSAVQL 239
G QL
Sbjct: 270 GQFGQL 275
Score = 156 (60.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 60/234 (25%), Positives = 105/234 (44%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S AL G ++ WG ++ GQ+GL K+S ++ + VSV + S C
Sbjct: 153 SAALTQDGRLYMWGDNSEGQIGL---GKESNALTPQ-----EVSVGKRVFWVS-C----- 198
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
G +HS + G ++T+G G+LGL + + +P++V + VVQ G H
Sbjct: 199 --GYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGH 255
Query: 127 CLVLTSSGVVTC---THKENGCGSDPSQGVQSNLVQ-------------DSHTTITSLNS 170
+ LT + V + + G G+ + +V+ ++HT + + N
Sbjct: 256 TVALTENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDN- 314
Query: 171 PGELYTWGNNEYGQMGINNSN-TTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
G LYT+G+ +G++G+ N T KP ++ + + CG H VL+K
Sbjct: 315 -GLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
Score = 142 (55.0 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 66/250 (26%), Positives = 106/250 (42%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
G H+L G ++ GG+ GQLGL + D+ S + + + ++ AG
Sbjct: 96 GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKML--AAG---- 149
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQA 120
S T S AL G ++ WG ++ GQ+GL K+S ++ P+ V V V +
Sbjct: 150 ----SNT----SAALTQDGRLYMWGDNSEGQIGL---GKESNALTPQEVSVGKRVFWV-S 197
Query: 121 CAGYSHCLVLTSSGVVTCTHKENG-CGSD---------PSQ--GVQSNLVQ----DSHTT 164
C Y V + T K++G G P Q + +VQ HT
Sbjct: 198 CGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTV 257
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
+ N E+Y++G ++GQ+G P+ VE + ACG NH+ +++ +
Sbjct: 258 ALTEN---EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDN 314
Query: 225 VSRLYAFGIG 234
LY FG G
Sbjct: 315 -GLLYTFGDG 323
Score = 38 (18.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 617 CPSCYTLALMEPRS 630
C C+ L L +PR+
Sbjct: 357 CGGCHMLVLAKPRT 370
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 44/134 (32%), Positives = 71/134 (52%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 75 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL D G VF WG D +G +GL KKS +P +V+ V VV+
Sbjct: 131 ----------TAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LDVPVVKV 177
Query: 121 CAGYSHCLVLTSSG 134
+G H ++LT+ G
Sbjct: 178 ASGNDHLVMLTADG 191
Score = 127 (49.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 61/192 (31%), Positives = 93/192 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVK-GLASV--SVVQACAGYSHCLVLTSTTG 69
G V T G GD GQLGL +++ +R K L S+ VVQA AG G
Sbjct: 35 GLVLTLGQGDV-GQLGL------GENVMERKKPALVSIPEDVVQAEAG-----------G 76
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
+ H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 77 M-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAA 133
Query: 130 LTSSGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGEL 174
LT G V + ++N G +P + VQ L V + + L + G+L
Sbjct: 134 LTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDL 193
Query: 175 YTWGNNEYGQMG 186
YT G E GQ+G
Sbjct: 194 YTLGCGEQGQLG 205
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 111 (44.1 bits), Expect = 2.4e-07, Sum P(6) = 2.4e-07
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG +HS A+ + G V+ WG ++ GQ + + + P + + S + A
Sbjct: 98 TGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISD-SETSPLLAVR----- 151
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+L G H+LAL+ E++ WG T QLGL + P++V+ LA V+Q
Sbjct: 152 -ILQLACGEEHTLALSISREIWAWG--TGCQLGLITTTFPVTK-PQKVEHLAGRVVLQVA 207
Query: 122 AGYSHCLVL 130
G H L L
Sbjct: 208 CGAFHSLAL 216
Score = 108 (43.1 bits), Expect = 2.4e-07, Sum P(6) = 2.4e-07
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L + ++Y+WG+N +GQ+G ++ TTV + ++ S N + +A G ++S L +
Sbjct: 567 ALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKMNS-EN-GVWSVAAGQDYSLFLVDTED 624
Query: 227 ---RLYAFGIGSAVQLDSPKSVH---KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK 280
LY G + D+ H KTP L+ + +TAG+DS ++ LV K
Sbjct: 625 FQPGLYYSGRQDPTEGDNLPENHSGTKTPVLLSCSKLGYISRVTAGKDSCLA----LVDK 680
Query: 281 KI--YSGGDHSIVTVTKSSDGVLSD-DFRVLNP 310
I Y H + T + LSD VL P
Sbjct: 681 NIMGYIASLHELATTERRFYSKLSDIKSHVLRP 713
Score = 78 (32.5 bits), Expect = 0.00014, Sum P(6) = 0.00014
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
E++TWG + GQ+G + + +P V+ L + + G HS L+ S++Y++G
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRL-QPLCVKCLDGKEVIHLEAGGYHSLALTAK-SQVYSWG 578
Query: 233 IGSAVQL---DSPKSVHKTPQLI--HGPWIASPVAMTAGED 268
+ QL D P +V + ++ +G W ++ AG+D
Sbjct: 579 SNTFGQLGHSDFPTTVPRLAKMNSENGVW-----SVAAGQD 614
Score = 59 (25.8 bits), Expect = 2.4e-07, Sum P(6) = 2.4e-07
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 878 TSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
TS + G + S+I+ P R YT + P L D D RW+SG+P+G
Sbjct: 1005 TSDLPPYGSS-SSIQRQEPPISRSAKYTFYKDPRLK---DATYDG-RWLSGKPHG 1054
Score = 47 (21.6 bits), Expect = 3.9e-06, Sum P(6) = 3.9e-06
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 703 FPDFPIVAAYPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNY 758
+PD + + +NG+ G EY ED + + G +CG +Y+Y
Sbjct: 1060 WPDGKMYSGMFRNGLED-GYGEYRIPNKALNKEDHYVGH---WKEGKMCGQGVYSY 1111
Score = 43 (20.2 bits), Expect = 2.4e-07, Sum P(6) = 2.4e-07
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 533 WIVVFG-SLIGICGLGHLDFYRELLLSISNFCDRLFLVGNSVLL-VLCVLMFYPLSHIHR 590
++V+ G L+ + L+ +ELL +S+ D N+ L+ +L L F P+ +H
Sbjct: 786 FLVMGGFQLLAKPAIDFLNKNQELLQDLSDMNDE-----NTQLMEILNTLFFLPIRRLHN 840
Query: 591 F 591
+
Sbjct: 841 Y 841
Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(6) = 2.4e-07
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1130 GTLCGLAIYNY 1140
G +CG +Y+Y
Sbjct: 1101 GKMCGQGVYSY 1111
Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(6) = 2.4e-07
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 140 HKENGCGSDPSQGVQSNLVQDSH---TTITS-LNS 170
+ ENG PSQ + + + H TT TS LNS
Sbjct: 354 NSENGEKPMPSQPLVEEAIPNLHSPPTTSTSALNS 388
Score = 37 (18.1 bits), Expect = 8.7e-07, Sum P(6) = 8.7e-07
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 549 LDFYRELLLSISNF 562
LD Y E SI+NF
Sbjct: 773 LDSYTEYCTSITNF 786
Score = 37 (18.1 bits), Expect = 3.9e-06, Sum P(6) = 3.9e-06
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
++ Q +++S ++ SLQ+ + DL VF
Sbjct: 1559 VIQQTFEEISQSVLASLQEDFLWSMDDLFPVF 1590
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 158 (60.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 59/214 (27%), Positives = 95/214 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLA++D G+V++WG G+LGL + D P +SV+ S+ +
Sbjct: 254 GTHHSLAMDDLGQVYSWGNGASGRLGLGN-DFSIVPTP------TLISVINRFG--SNEI 304
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS--QSIPKRVKGLASVSVVQA 120
G +S+ L G+V+++G + H +LG + D QS PK++ + + + A
Sbjct: 305 ATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSI-A 363
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENGC------------------------GSDPSQGVQS 155
CA + H + L G V TC NG G+ P + V
Sbjct: 364 CASW-HSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIK 422
Query: 156 NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN 189
+ ++ T T L+ G LY+WG N Q+G+ N
Sbjct: 423 QIACGTNFT-TVLSESGSLYSWGVNTKSQLGLIN 455
Score = 135 (52.6 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 48/172 (27%), Positives = 77/172 (44%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
WHS+ L+ G V+T G T+G+LG + S P+RV + S ++
Sbjct: 367 WHSVFLDLKGRVYTCGSSTNGRLG-RAISSYSSFYPERVS--ITNSKTNGTLPQEE-VIK 422
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ--SIPKRVKGLASVSVVQACA 122
G + L++ G +++WG +T QLGL + S+ S PK V L ++
Sbjct: 423 QIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAV 482
Query: 123 GYSHCLVLTSSGVVTCTHKENG---CGSDPSQGVQSNLVQDSHTTITSLNSP 171
G H + L+ G V C + +N CG + NL + T TS ++P
Sbjct: 483 GDQHVVALSDQGEVFC-YGDNSTLQCGFGEVLNFEINLTKVKIET-TSSDAP 532
Score = 106 (42.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 35/134 (26%), Positives = 67/134 (50%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
++L L D G V++ G ++G+ G + K+ IP ++ L++ + G +H
Sbjct: 205 YNLILTDTGAVYSSGLCSYGKTGHKK--KRDVLIPTQILELSNKRIKSIACG-TH----- 256
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGL--ESADKKSQSIPKRVKGLASVSVVQA-CA 122
HSLA++D G+V++WG G+LGL + + + ++ + S + A A
Sbjct: 257 ------HSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAA 310
Query: 123 GYSHCLVLTSSGVV 136
G + ++L S+G V
Sbjct: 311 GCDNSMILGSNGDV 324
Score = 93 (37.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE---SLVN--LP----IALIACGANHS 218
L+ G +YT G++ G++G S+ + P+RV S N LP I IACG N +
Sbjct: 372 LDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFT 431
Query: 219 FVLSKSVSRLYAFGIGSAVQL 239
VLS+S S LY++G+ + QL
Sbjct: 432 TVLSESGS-LYSWGVNTKSQL 451
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 153 (58.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 70/263 (26%), Positives = 118/263 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ LN G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 75 GGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL + G VF WG D +G +GL KKS +P +V+ + VV+
Sbjct: 131 ----------TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LDMPVVKV 177
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPS--------QGVQSNLV------------ 158
+G H ++LT+ G + T E G G P QG++ LV
Sbjct: 178 ASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSR 237
Query: 159 -----QDSH--TTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
QD+ +T +++ G +Y +G + Y Q+G + + PQ + S N +
Sbjct: 238 GRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFI-PQNLTSFKNSTKSW 296
Query: 211 IA-CGANHSFVLSKSVSRLYAFG 232
+ G H + S + Y+ G
Sbjct: 297 VGFSGGQHHTICMDSEGKAYSLG 319
Score = 132 (51.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 59/189 (31%), Positives = 91/189 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
G V T G GD GQLGL +S+ +R K A V ++Q V+ + G H
Sbjct: 35 GLVLTLGQGDV-GQLGL------GESVLERKKP-ALVPLLQD--------VVQAEAGGMH 78
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
++ LN G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH LT
Sbjct: 79 TVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAALTE 136
Query: 133 SGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGELYTW 177
G V + ++N G +P + VQ L V + + L + G+LYT
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTL 196
Query: 178 GNNEYGQMG 186
G E GQ+G
Sbjct: 197 GCGEQGQLG 205
Score = 47 (21.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
R++A+G+G+ QL + + W SPV MT + L + VV + SGG
Sbjct: 365 RVFAWGMGTNYQLGTGQD--------EDAW--SPVEMTGKQ--LENR----VVLTVSSGG 408
Query: 287 DHSIVTV 293
H+++ V
Sbjct: 409 QHTVLLV 415
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 153 (58.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 71/242 (29%), Positives = 100/242 (41%)
Query: 6 HSLALNDCGEVFT--WGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCL 62
HSL L D GEV++ WG D GQ GL S P ++ G LA V+VVQ A Y C
Sbjct: 247 HSLFLTDKGEVYSCGWGAD--GQTGL--GHYNITSAPTKLGGDLAGVNVVQV-ATYGDCC 301
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
LA++ G +F WG + QL D ++P+ + V QA
Sbjct: 302 -----------LAVSADGSLFGWGNSEYLQLA-SVTDSTQVNVPRCLPFSGVGQVKQAAC 349
Query: 123 GYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP---------- 171
G + C VL G V + G G + + ++ + +T LN
Sbjct: 350 GGTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGL 409
Query: 172 ---------GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
GEL+ WG N G +GI P RV ++ P+ +ACG +H L+
Sbjct: 410 SHFAALTDRGELFVWGKNIRGCLGIGRLEDQYF-PWRV-TMPGEPVD-VACGVDHMVTLA 466
Query: 223 KS 224
KS
Sbjct: 467 KS 468
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 73/256 (28%), Positives = 104/256 (40%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQACAGYSH 60
G HSL L D VF+ G +++GQ G + + + S +V + VVQ G H
Sbjct: 188 GRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVACGQDH 247
Query: 61 CLVLTSTTGLWHSLALNDCGEVFT--WGGDTHGQLGLESADKKSQSIPKRVKG-LASVSV 117
L LT D GEV++ WG D GQ GL S P ++ G LA V+V
Sbjct: 248 SLFLT------------DKGEVYSCGWGAD--GQTGL--GHYNITSAPTKLGGDLAGVNV 291
Query: 118 VQACAGYSHCLVLTSSGV--------------VTCTHKENGCGSDPSQGV-QSNLVQDSH 162
VQ CL +++ G VT + + N P GV Q
Sbjct: 292 VQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGG 351
Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK--PQRVESLVNL-P---IALIACGAN 216
T LN G ++ WG G+ G N T + + P + L L P ++ I CG +
Sbjct: 352 TGCAVLNGEGHVFVWGYGILGK-GPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLS 410
Query: 217 HSFVLSKSVSRLYAFG 232
H L+ L+ +G
Sbjct: 411 HFAALTDR-GELFVWG 425
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 169 (64.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 64/216 (29%), Positives = 102/216 (47%)
Query: 37 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
+S P+++ + S S Q CAG +H V+T L+ +N G G HGQLG
Sbjct: 354 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELY--TWVNMQG-----GTKLHGQLG- 405
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN-GC-GSDPSQGV 153
DK S PK V+ L ++ Q G + +T G + + GC G D G
Sbjct: 406 -HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGP 464
Query: 154 Q-----------SNLVQ-----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
+ SN V+ D+H + + N E+Y+WG EYG++G+++ T P
Sbjct: 465 EVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK--EVYSWGCGEYGRLGLDSEEDYYT-P 521
Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
QRV+ L I + CG + +F+L++S ++ A G+
Sbjct: 522 QRVDVPKALIIVAVQCGCDGTFLLTQS-GKVLACGL 556
Score = 143 (55.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 54/198 (27%), Positives = 92/198 (46%)
Query: 103 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPS-- 150
+S P+++ + S S Q CAG +H V+T + T H + G G S
Sbjct: 354 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 413
Query: 151 --------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN-SNTTVTKPQRVE 201
QG + V + G+LY +G++ YG MG++ S V +P ++
Sbjct: 414 QPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLN 473
Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS--AVQLDSPKSVHKTPQLIHGPWIAS 259
++ P+ ++CG NH VL+++ +Y++G G + LDS + + TPQ + P
Sbjct: 474 FFLSNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYY-TPQRVDVPKALI 531
Query: 260 PVAMTAGEDS--LVSHSG 275
VA+ G D L++ SG
Sbjct: 532 IVAVQCGCDGTFLLTQSG 549
Score = 40 (19.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 354 GCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
GC +G+FL ++ + +C +F+ + L+
Sbjct: 538 GC-DGTFLLTQSGKVLACGLNEFNKLGLN 565
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 169 (64.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 64/216 (29%), Positives = 102/216 (47%)
Query: 37 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
+S P+++ + S S Q CAG +H V+T L+ +N G G HGQLG
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELY--TWVNMQG-----GTKLHGQLG- 407
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN-GC-GSDPSQGV 153
DK S PK V+ L ++ Q G + +T G + + GC G D G
Sbjct: 408 -HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGP 466
Query: 154 Q-----------SNLVQ-----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
+ SN V+ D+H + + N E+Y+WG EYG++G+++ T P
Sbjct: 467 EVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK--EVYSWGCGEYGRLGLDSEEDYYT-P 523
Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
QRV+ L I + CG + +F+L++S ++ A G+
Sbjct: 524 QRVDVPKALIIVAVQCGCDGTFLLTQS-GKVLACGL 558
Score = 143 (55.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 54/198 (27%), Positives = 92/198 (46%)
Query: 103 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPS-- 150
+S P+++ + S S Q CAG +H V+T + T H + G G S
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 151 --------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN-SNTTVTKPQRVE 201
QG + V + G+LY +G++ YG MG++ S V +P ++
Sbjct: 416 QPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLN 475
Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS--AVQLDSPKSVHKTPQLIHGPWIAS 259
++ P+ ++CG NH VL+++ +Y++G G + LDS + + TPQ + P
Sbjct: 476 FFLSNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYY-TPQRVDVPKALI 533
Query: 260 PVAMTAGEDS--LVSHSG 275
VA+ G D L++ SG
Sbjct: 534 IVAVQCGCDGTFLLTQSG 551
Score = 40 (19.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 354 GCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
GC +G+FL ++ + +C +F+ + L+
Sbjct: 540 GC-DGTFLLTQSGKVLACGLNEFNKLGLN 567
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 111 (44.1 bits), Expect = 3.7e-07, Sum P(5) = 3.7e-07
Identities = 44/153 (28%), Positives = 73/153 (47%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L + ++Y+WG+N +GQ+G ++ TTV + ++ S N + IA G ++S L +
Sbjct: 573 ALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKISS-EN-GVWSIAAGRDYSLFLVDTED 630
Query: 227 ---RLYAFGIGSAVQLDSPKSVH---KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK 280
LY G + D+ H KTP L+ + +TAG+DS ++ LV K
Sbjct: 631 FQPGLYYSGRQDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLA----LVDK 686
Query: 281 KI--YSGGDHSIVTVTKSSDGVLSD-DFRVLNP 310
I Y H + T + LSD ++L P
Sbjct: 687 NIMGYIASLHELATTERRFYSKLSDIKSQILRP 719
Score = 109 (43.4 bits), Expect = 3.7e-07, Sum P(5) = 3.7e-07
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG +HS A+ D G + WG ++ GQ + + Q +P+ VS+ + A
Sbjct: 98 TGSFHSGAVTDNGVAYMWGENSAGQCAVAN----QQYVPEP----NPVSIADSEASPLLA 149
Query: 62 L-VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ +L G H+LAL+ E++ WG T QLGL + P++V+ LA V+Q
Sbjct: 150 VRILQLACGEEHTLALSISREIWAWG--TGCQLGLITTAFPVTK-PQKVEHLAGRVVLQV 206
Query: 121 CAGYSHCLVL 130
G H L L
Sbjct: 207 ACGAFHSLAL 216
Score = 78 (32.5 bits), Expect = 0.00047, Sum P(5) = 0.00047
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
E++TWG + GQ+G + + +P V+ L + + G HS L+ S++Y++G
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLDGKEVIHLEAGGYHSLALTAK-SQVYSWG 584
Query: 233 IGSAVQL---DSPKSVHKTPQLI--HGPWIASPVAMTAGED 268
+ QL D P +V + ++ +G W ++ AG D
Sbjct: 585 SNTFGQLGHSDFPTTVPRLAKISSENGVW-----SIAAGRD 620
Score = 75 (31.5 bits), Expect = 0.00057, Sum P(5) = 0.00057
Identities = 31/100 (31%), Positives = 46/100 (46%)
Query: 38 SIPKRVKGLASVSVVQACAGYSHCLVLTST-TGLWHSLALNDCGEVFTWGGDTHGQLGLE 96
S+P + ++ + +A + +VLT T +G +L + EV+TWG GQLG
Sbjct: 483 SLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLG-- 540
Query: 97 SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV 136
D + P VK L V+ AG H L LT+ V
Sbjct: 541 HGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQV 580
Score = 55 (24.4 bits), Expect = 3.7e-07, Sum P(5) = 3.7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 889 SNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
S+++ P R YT + P L D D RW+SG+P+G
Sbjct: 1021 SSVQRQEPPISRSAKYTFYKDPRLK---DATYDG-RWLSGKPHG 1060
Score = 48 (22.0 bits), Expect = 5.8e-07, Sum P(4) = 5.8e-07
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 703 FPDFPIVAAYPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNY 758
+PD + + +NG+ G EY ED + + G +CG +Y+Y
Sbjct: 1066 WPDGKMYSGMFRNGLED-GYGEYRIPNKAMNKEDHYVGH---WKEGKMCGQGVYSY 1117
Score = 41 (19.5 bits), Expect = 3.7e-07, Sum P(5) = 3.7e-07
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 533 WIVVFG-SLIGICGLGHLDFYRELLLSISNFCDRLFLVGNSVLL-VLCVLMFYPLSHIHR 590
++V+ G L+ + L+ +ELL +S D N+ L+ +L L F P+ +H
Sbjct: 792 FLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDE-----NTQLMEILNTLFFLPIRRLHN 846
Query: 591 F 591
+
Sbjct: 847 Y 847
Score = 38 (18.4 bits), Expect = 3.7e-07, Sum P(5) = 3.7e-07
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1130 GTLCGLAIYNY 1140
G +CG +Y+Y
Sbjct: 1107 GKMCGQGVYSY 1117
Score = 37 (18.1 bits), Expect = 8.9e-07, Sum P(5) = 8.9e-07
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 549 LDFYRELLLSISNF 562
LD Y E SI+NF
Sbjct: 779 LDSYTEYCTSITNF 792
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 129 (50.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 41/161 (25%), Positives = 76/161 (47%)
Query: 80 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV-SVVQACAGYSHCLVLTSSG-VVT 137
G+V+ GG+ GQLGL D++S + S + Q AG + LT+ G + T
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAF--HLISFFTSQHKIKQLSAGSNTSAALTAEGELYT 60
Query: 138 CTHKENG-CGSDPS-----------QGVQSNLVQ----DSHTTITSLNSPGELYTWGNNE 181
E+G G P G+ ++Q HT + + + +YT+G +
Sbjct: 61 FGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA---VYTFGLGQ 117
Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
+GQ+G+ ++P+ +ES+ + I+ + CG NH+ +++
Sbjct: 118 FGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 158
Score = 118 (46.6 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 41/125 (32%), Positives = 58/125 (46%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV-SVVQACAGYSHCLVLTSTTGLWH 72
G+V+ GG+ GQLGL D++S + S + Q AG S T
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAF--HLISFFTSQHKIKQLSAG--------SNT---- 48
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
S AL GE++T+G G+LGL + +P+ V G+ S V+Q G H +VLT
Sbjct: 49 SAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGI-SEKVIQVACGGGHTVVLTE 107
Query: 133 SGVVT 137
V T
Sbjct: 108 KAVYT 112
Score = 117 (46.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S AL GE++T+G G+LGL + +P+ V G+ S V+Q G H +VLT
Sbjct: 49 SAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGI-SEKVIQVACGGGHTVVLTE 107
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
V+T+G GQLGL + ++ S PK ++ + + C G +H
Sbjct: 108 KA-------------VYTFGLGQFGQLGLGTFTFET-SEPKVIESVKDKKISHVCCGENH 153
Query: 127 CLVLT 131
++T
Sbjct: 154 TALIT 158
Score = 109 (43.4 bits), Expect = 0.00062, P = 0.00062
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 150 SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPI 208
SQ L S+T+ +L + GELYT+G E G++G+ K PQ V ++ +
Sbjct: 35 SQHKIKQLSAGSNTS-AALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPG-ISEKV 92
Query: 209 ALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
+ACG H+ VL++ +Y FG+G QL
Sbjct: 93 IQVACGGGHTVVLTEKA--VYTFGLGQFGQL 121
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 110 (43.8 bits), Expect = 4.7e-07, Sum P(5) = 4.7e-07
Identities = 43/153 (28%), Positives = 73/153 (47%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L + ++Y+WG+N +GQ+G ++ TTV + ++ S N + +A G ++S L +
Sbjct: 573 ALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKISS-EN-GVWSVAAGRDYSLFLVDTED 630
Query: 227 ---RLYAFGIGSAVQLDSPKSVH---KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK 280
LY G + D+ H KTP L+ + +TAG+DS ++ LV K
Sbjct: 631 FQPGLYYSGRQDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLA----LVDK 686
Query: 281 KI--YSGGDHSIVTVTKSSDGVLSD-DFRVLNP 310
I Y H + T + LSD ++L P
Sbjct: 687 NIMGYIASLHELATTERRFYSKLSDIKSQILRP 719
Score = 109 (43.4 bits), Expect = 4.7e-07, Sum P(5) = 4.7e-07
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG +HS A+ D G + WG ++ GQ + + Q +P+ VS+ + A
Sbjct: 98 TGSFHSGAVTDNGVAYMWGENSAGQCAVAN----QQYVPEP----NPVSIADSEASPLLA 149
Query: 62 L-VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ +L G H+LAL+ E++ WG T QLGL + P++V+ LA V+Q
Sbjct: 150 VRILQLACGEEHTLALSISREIWAWG--TGCQLGLITTAFPVTK-PQKVEHLAGRVVLQV 206
Query: 121 CAGYSHCLVL 130
G H L L
Sbjct: 207 ACGAFHSLAL 216
Score = 78 (32.5 bits), Expect = 0.00047, Sum P(5) = 0.00047
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
E++TWG + GQ+G + + +P V+ L + + G HS L+ S++Y++G
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLDGKEVIHLEAGGYHSLALTAK-SQVYSWG 584
Query: 233 IGSAVQL---DSPKSVHKTPQLI--HGPWIASPVAMTAGED 268
+ QL D P +V + ++ +G W ++ AG D
Sbjct: 585 SNTFGQLGHSDFPTTVPRLAKISSENGVW-----SVAAGRD 620
Score = 75 (31.5 bits), Expect = 0.00071, Sum P(5) = 0.00071
Identities = 31/100 (31%), Positives = 46/100 (46%)
Query: 38 SIPKRVKGLASVSVVQACAGYSHCLVLTST-TGLWHSLALNDCGEVFTWGGDTHGQLGLE 96
S+P + ++ + +A + +VLT T +G +L + EV+TWG GQLG
Sbjct: 483 SLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLG-- 540
Query: 97 SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV 136
D + P VK L V+ AG H L LT+ V
Sbjct: 541 HGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQV 580
Score = 55 (24.4 bits), Expect = 4.7e-07, Sum P(5) = 4.7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 889 SNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
S+++ P R YT + P L D D RW+SG+P+G
Sbjct: 1021 SSVQRQEPPISRSAKYTFYKDPRLK---DATYDG-RWLSGKPHG 1060
Score = 48 (22.0 bits), Expect = 7.3e-07, Sum P(4) = 7.3e-07
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 703 FPDFPIVAAYPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNY 758
+PD + + +NG+ G EY ED + + G +CG +Y+Y
Sbjct: 1066 WPDGKMYSGMFRNGLED-GYGEYRIPNKAMNKEDHYVGH---WKEGKMCGQGVYSY 1117
Score = 41 (19.5 bits), Expect = 4.7e-07, Sum P(5) = 4.7e-07
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 533 WIVVFG-SLIGICGLGHLDFYRELLLSISNFCDRLFLVGNSVLL-VLCVLMFYPLSHIHR 590
++V+ G L+ + L+ +ELL +S D N+ L+ +L L F P+ +H
Sbjct: 792 FLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDE-----NTQLMEILNTLFFLPIRRLHN 846
Query: 591 F 591
+
Sbjct: 847 Y 847
Score = 38 (18.4 bits), Expect = 4.7e-07, Sum P(5) = 4.7e-07
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1130 GTLCGLAIYNY 1140
G +CG +Y+Y
Sbjct: 1107 GKMCGQGVYSY 1117
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 549 LDFYRELLLSISNF 562
LD Y E SI+NF
Sbjct: 779 LDSYTEYCTSITNF 792
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 155 (59.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 72/263 (27%), Positives = 117/263 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 75 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL D G VF WG D +G +GL KKS +P +V+ V VV+
Sbjct: 131 ----------TAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LDVPVVKV 177
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPS--------QGVQSNLV------------ 158
+G H ++LT+ G + T E G G P QG++ LV
Sbjct: 178 ASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 237
Query: 159 -----QDSH--TTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
QD+ T +++ G +Y +G + Y Q+G + + PQ + S N +
Sbjct: 238 GHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI-PQNLTSFKNSTKSW 296
Query: 211 IA-CGANHSFVLSKSVSRLYAFG 232
+ G H V S + Y+ G
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLG 319
Score = 127 (49.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 61/192 (31%), Positives = 93/192 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVK-GLASV--SVVQACAGYSHCLVLTSTTG 69
G V T G GD GQLGL +++ +R K L S+ VVQA AG G
Sbjct: 35 GLVLTLGQGDV-GQLGL------GENVMERKKPALVSIPEDVVQAEAG-----------G 76
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
+ H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 77 M-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAA 133
Query: 130 LTSSGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGEL 174
LT G V + ++N G +P + VQ L V + + L + G+L
Sbjct: 134 LTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDL 193
Query: 175 YTWGNNEYGQMG 186
YT G E GQ+G
Sbjct: 194 YTLGCGEQGQLG 205
Score = 42 (19.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
R++A+G+G+ QL + + W SPV M + L + VV + SGG
Sbjct: 365 RVFAWGMGTNYQLGTGQD--------EDAW--SPVEMMGKQ--LENR----VVLSVSSGG 408
Query: 287 DHSIVTV 293
H+++ V
Sbjct: 409 QHTVLLV 415
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 128 (50.1 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 37/136 (27%), Positives = 60/136 (44%)
Query: 12 DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW 71
D GEV+ WG + HGQL E+A +P++++ +HC T +W
Sbjct: 2 DAGEVYVWGSNKHGQLANEAA---FLPVPQKIE--------------AHCFQNEKVTAIW 44
Query: 72 ----HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 127
H +A + G++FTWG +GQLG + + + K+ L + HC
Sbjct: 45 SGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHC 104
Query: 128 LVLTSSGVVTCTHKEN 143
L T + V+C + N
Sbjct: 105 L--TGATEVSCGSEHN 118
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 167 (63.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 63/216 (29%), Positives = 102/216 (47%)
Query: 37 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
+S P+++ + S S Q CAG +H V+T L+ +N G G HGQLG
Sbjct: 373 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELY--TWVNMQG-----GTKLHGQLG- 424
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN-GC-GSDPSQGV 153
DK S PK V+ L ++ Q G + +T G + + GC G D G
Sbjct: 425 -HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGA 483
Query: 154 Q-----------SNLVQ-----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
+ SN V+ D+H + + N E+Y+WG EYG++G+++ T P
Sbjct: 484 EVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNK--EVYSWGCGEYGRLGLDSEEDYYT-P 540
Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
Q+V+ L I + CG + +F+L++S ++ A G+
Sbjct: 541 QKVDVPKALIIVAVQCGCDGTFLLTQS-GKVLACGL 575
Score = 142 (55.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 53/198 (26%), Positives = 92/198 (46%)
Query: 103 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPS-- 150
+S P+++ + S S Q CAG +H V+T + T H + G G S
Sbjct: 373 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 432
Query: 151 --------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN-SNTTVTKPQRVE 201
QG V + G+LY +G++ YG MG++ + V +P +++
Sbjct: 433 QPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLD 492
Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS--AVQLDSPKSVHKTPQLIHGPWIAS 259
++ P+ ++CG NH VL+++ +Y++G G + LDS + + TPQ + P
Sbjct: 493 FFLSNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYY-TPQKVDVPKALI 550
Query: 260 PVAMTAGEDS--LVSHSG 275
VA+ G D L++ SG
Sbjct: 551 IVAVQCGCDGTFLLTQSG 568
Score = 40 (19.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 354 GCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
GC +G+FL ++ + +C +F+ + L+
Sbjct: 557 GC-DGTFLLTQSGKVLACGLNEFNKLGLN 584
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 151 (58.2 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 56/194 (28%), Positives = 87/194 (44%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
HSL + G++++WG + GQLG D K P+ ++ L+ ++V A G +H L LT
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLG--HGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Query: 132 SSGVVTCTHKENGCGS----DPSQGVQSNL-VQDSHTTITSL----------NSPGELYT 176
+G V EN G + + V S + + IT + + G LY+
Sbjct: 217 DTGSVFA-FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYS 275
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVE---SLVNLPIALIACGANHSFVLS--KSVSRLYAF 231
+G EYGQ+G N+ + + QR+E LV +A+ +L V R A
Sbjct: 276 FGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVAC 335
Query: 232 GIGSAVQLDSPKSV 245
G + LDS K V
Sbjct: 336 GANHTLVLDSQKRV 349
Score = 122 (48.0 bits), Expect = 0.00091, P = 0.00091
Identities = 58/239 (24%), Positives = 105/239 (43%)
Query: 10 LNDC-GEVFTWGGDTHGQLGLESADK---KSQSI-------PKRVKGLASVSVVQACAGY 58
L DC G ++++G +GQLG S K ++Q I P+RV +
Sbjct: 266 LMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPV 325
Query: 59 SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK--GLASVS 116
+ +V G H+L L+ VF+WG +G+LG A++K + +P+ VK
Sbjct: 326 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG--HAEQKDEMVPRLVKLFDFPGRG 383
Query: 117 VVQACAGYSHCLVLTSSGVV-----TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP 171
Q AGY+ ++ G + T T +E+ Q + ++ +S+
Sbjct: 384 ATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVA 443
Query: 172 GELYT--WGNNE-YGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+ T WG + +G++G + + T Q V++L + +A G +HS V+++ S
Sbjct: 444 ADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDES 502
>UNIPROTKB|A8J3Y0 [details] [associations]
symbol:CHLREDRAFT_131003 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
KO:K10587 EMBL:DS496136 RefSeq:XP_001696035.1
ProteinModelPortal:A8J3Y0 EnsemblPlants:EDP00984 GeneID:5721637
KEGG:cre:CHLREDRAFT_131003 ProtClustDB:CLSN2922318 Uniprot:A8J3Y0
Length = 320
Score = 147 (56.8 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 720 YGITEY-EETRSIWFSED--TFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE 776
YG+ Y EETR+ WF+ E +G + GLAIYN I+++ P +YKK+L E
Sbjct: 28 YGLFTYSEETRTFWFNTAMAALEADGEELPVGLVLGLAIYNGVILDVHLPQVVYKKLLGE 87
Query: 777 -PILLQDLKDLSPTLAKSLQDILDYREPDLED 807
P+ L DL + P L +SL ++ D+ED
Sbjct: 88 GPLGLADLAEAFPALGRSLAAVMAMEPEDVED 119
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 1035 EEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
EE D GGV REF LL+ EI P+YG+F EETR+ WF+
Sbjct: 3 EEGVDQGGVSREFFQLLVAEIFQPQYGLFTYSEETRTFWFN 43
>UNIPROTKB|Q757T0 [details] [associations]
symbol:HUL4 "Probable E3 ubiquitin-protein ligase HUL4"
species:284811 "Ashbya gossypii ATCC 10895" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 GO:GO:0005634
GO:GO:0005737 GO:GO:0004842 GO:GO:0042787 EMBL:AE016818
GenomeReviews:AE016818_GR SUPFAM:SSF56204 eggNOG:COG5021 KO:K12232
RefSeq:NP_984793.1 ProteinModelPortal:Q757T0 STRING:Q757T0
EnsemblFungi:AAS52617 GeneID:4620985 KEGG:ago:AGOS_AEL068W
HOGENOM:HOG000246763 OMA:NEPGIDA OrthoDB:EOG42Z7Z7 PhylomeDB:Q757T0
Uniprot:Q757T0
Length = 839
Score = 173 (66.0 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 46/151 (30%), Positives = 77/151 (50%)
Query: 927 SGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTLN 984
S P S F +C PF+F K ++LE + R ME++ Q FL+ + ++
Sbjct: 419 SSGPRYSPVQFTICQCPFLFSLGMKISILEYETRRLMEYSAEQA----FLKALDRKQVVD 474
Query: 985 QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
YL++ V R+ + D++R + Q D KK L++ +F E DAGG+R
Sbjct: 475 VYLKIRVRREFVTTDSLRSI-QNQQKDLKKSLRI------------EFVNEPGIDAGGLR 521
Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
+E+ +LL +++ +P G+F E+R WFS
Sbjct: 522 KEWFLLLTRDLFNPNNGLFVYVPESRLCWFS 552
Score = 161 (61.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 39/115 (33%), Positives = 60/115 (52%)
Query: 713 PKNGINHYGITEYEETRSIWFS-EDTFEDQ---------NMCFLIGTLCGLAIYNYTIIN 762
P NG+ Y E+R WFS ++ E + + +L G + GLAIYN TI++
Sbjct: 535 PNNGLFVY----VPESRLCWFSIMESIEHELLQGEGSSSELYYLFGVVLGLAIYNSTILD 590
Query: 763 MPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
+ FP A YKKI E + + D +L P ++ +L+Y D ED+F +TF +
Sbjct: 591 LKFPRAFYKKICGEVLSVNDFLELYPETGTNMLKMLEYDGEDFEDIFALTFETCF 645
Score = 39 (18.8 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 368 HFSCNSKKFSFI-KLSLINWFMKLHFS 393
HF +K F K+ L+N ++ HF+
Sbjct: 251 HFLKYMQKDIFASKVELVNMYITFHFA 277
Score = 38 (18.4 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 48 SVSVVQACAGYSHCLVLTSTTGLWHSL 74
S V++ GY CL S L H L
Sbjct: 227 SYEVLKKAVGYMSCLDEASAKELVHFL 253
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 116 (45.9 bits), Expect = 8.3e-07, Sum P(5) = 8.3e-07
Identities = 39/129 (30%), Positives = 60/129 (46%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG +HS A+ + G V+ WG + GQ + + S+ P + + S + A
Sbjct: 98 TGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISD-SETSPLLAVR----- 151
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+L G H+LAL+ E++ WG T QLGL + P++V+ LA V+Q
Sbjct: 152 -ILQLACGEEHTLALSISREIWAWG--TGCQLGLITTTFPVTK-PQKVEHLAGRVVLQVA 207
Query: 122 AGYSHCLVL 130
G H L L
Sbjct: 208 CGAFHSLAL 216
Score = 100 (40.3 bits), Expect = 8.3e-07, Sum P(5) = 8.3e-07
Identities = 44/159 (27%), Positives = 74/159 (46%)
Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
SH+ +L + ++Y+WG+N +GQ+G + TTV + +V S + +A G +S
Sbjct: 563 SHSL--ALTAKSQVYSWGSNTFGQLGHSEFPTTVPRLSKVSS--ESGVWSVAAGHGYSLF 618
Query: 221 LSKSVS---RLYAFGIGSAVQLDS-PK--SVHKTPQLIHGPWIASPVAMTAGEDSLVSHS 274
L + LY G + D+ P+ S TP L+ + +TAG+DS ++
Sbjct: 619 LVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTTTPVLLSCSKLGYISRVTAGKDSYLA-- 676
Query: 275 GGLVVKKI--YSGGDHSIVTVTKSSDGVLSD-DFRVLNP 310
LV K I Y H + T + LS+ ++L P
Sbjct: 677 --LVDKNIMGYIASLHELATTERRFYSKLSEIKSQILRP 713
Score = 95 (38.5 bits), Expect = 9.3e-05, Sum P(5) = 9.3e-05
Identities = 36/136 (26%), Positives = 62/136 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G+ H + L + GEV+++G L + ++ P +S + A G+ H
Sbjct: 49 GVKHGVLLTEDGEVYSFGT-------LPWKSEAAEICP------SSPLLESALVGH-H-- 92
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-----LASVSV 117
V+T TG +HS A+ + G V+ WG + GQ + + S+ P + L +V +
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRI 152
Query: 118 VQACAGYSHCLVLTSS 133
+Q G H L L+ S
Sbjct: 153 LQLACGEEHTLALSIS 168
Score = 77 (32.2 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
E++TWG + GQ+G + + +P V+ L + + G +HS L+ S++Y++G
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLDGKEVIHLEAGGSHSLALTAK-SQVYSWG 578
Query: 233 IGSAVQLDSPKSVHKTPQL 251
+ QL + P+L
Sbjct: 579 SNTFGQLGHSEFPTTVPRL 597
Score = 51 (23.0 bits), Expect = 8.3e-07, Sum P(5) = 8.3e-07
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 889 SNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
S ++ P R YT FY + D D RW+SG+P+G
Sbjct: 1015 STVQRQEPPISRSAKYT-FYKD--TRLKDATYDG-RWLSGKPHG 1054
Score = 48 (22.0 bits), Expect = 2.0e-06, Sum P(5) = 2.0e-06
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 703 FPDFPIVAAYPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNY 758
+PD + + +NG+ G EY ED + + G +CG +Y+Y
Sbjct: 1060 WPDGKVYSGTFRNGLED-GYGEYRIPNKALNKEDHYVGH---WKEGKMCGQGVYSY 1111
Score = 45 (20.9 bits), Expect = 8.3e-07, Sum P(5) = 8.3e-07
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 533 WIVVFGS-LIGICGLGHLDFYRELLLSISNFCDRLFLVGNSVLL-VLCVLMFYPLSHIHR 590
++V+ GS L+ + L+ +ELL +S D N+ L+ +L L F P+ +H
Sbjct: 786 FLVMGGSQLLAKPAIDFLNKNQELLQDLSEVNDE-----NTQLMEILNALFFLPIRRLHN 840
Query: 591 F 591
+
Sbjct: 841 Y 841
Score = 42 (19.8 bits), Expect = 1.6e-06, Sum P(5) = 1.6e-06
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 549 LDFYRELLLSISNFCDRLFLVGNSVLL 575
LD Y E S+SNF ++G S LL
Sbjct: 773 LDSYTEYCTSVSNF----LVMGGSQLL 795
Score = 38 (18.4 bits), Expect = 8.3e-07, Sum P(5) = 8.3e-07
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1130 GTLCGLAIYNY 1140
G +CG +Y+Y
Sbjct: 1101 GKMCGQGVYSY 1111
Score = 37 (18.1 bits), Expect = 2.0e-06, Sum P(5) = 2.0e-06
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
++ Q +++S ++ SLQ+ + DL VF
Sbjct: 1568 VIQQTFEEISQSVLASLQEDFLWSMDDLFPVF 1599
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 149 (57.5 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 75/256 (29%), Positives = 104/256 (40%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQACAGYSH 60
G HSL L D VF+ G + HGQ G + + + S +V + VVQ G H
Sbjct: 179 GRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQDH 238
Query: 61 CLVLTSTTGLWHSLALNDCGEVFT--WGGDTHGQLGLESADKKSQSIPKRVKG-LASVSV 117
L LT D GEV++ WG D GQ GL S P ++ G LA V+V
Sbjct: 239 SLFLT------------DKGEVYSCGWGAD--GQTGL--GHYNITSTPSKLGGDLAGVTV 282
Query: 118 VQACAGYSHCLVLTSSG--------------VVTCTHKENGCGSDPSQGV-QSNLVQDSH 162
VQ CL L++ G VT + + N P GV + V
Sbjct: 283 VQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGG 342
Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK--PQRVESLVNL-P---IALIACGAN 216
T LN G ++ WG G+ G N S T + + P + L P ++ I CG +
Sbjct: 343 TGCAILNEEGHVFVWGYGILGK-GPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLS 401
Query: 217 HSFVLSKSVSRLYAFG 232
H L+ L+ +G
Sbjct: 402 HFAALTNK-GELFVWG 416
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 165 (63.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 63/216 (29%), Positives = 102/216 (47%)
Query: 37 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
+S P+++ + S S Q CAG +H V+T L+ +N G G HGQLG
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELY--TWVNMQG-----GTKLHGQLG- 407
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN-GC-GSDPSQGV 153
DK S PK V+ L ++ Q G + +T G + + GC G D G
Sbjct: 408 -HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGP 466
Query: 154 Q-----------SNLVQ-----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
+ SN V+ D+H + + N E+Y+WG EYG++G+++ T P
Sbjct: 467 EVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK--EVYSWGCGEYGRLGLDSEEDYYT-P 523
Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
Q+V+ L I + CG + +F+L++S ++ A G+
Sbjct: 524 QKVDVPKALIIVAVQCGCDGTFLLTQS-GKVLACGL 558
Score = 139 (54.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 53/198 (26%), Positives = 91/198 (45%)
Query: 103 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPS-- 150
+S P+++ + S S Q CAG +H V+T + T H + G G S
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 151 --------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN-SNTTVTKPQRVE 201
QG V + G+LY +G++ YG MG++ + V +P ++
Sbjct: 416 QPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLN 475
Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS--AVQLDSPKSVHKTPQLIHGPWIAS 259
++ P+ ++CG NH VL+++ +Y++G G + LDS + + TPQ + P
Sbjct: 476 FFLSNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYY-TPQKVDVPKALI 533
Query: 260 PVAMTAGEDS--LVSHSG 275
VA+ G D L++ SG
Sbjct: 534 IVAVQCGCDGTFLLTQSG 551
Score = 40 (19.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 354 GCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
GC +G+FL ++ + +C +F+ + L+
Sbjct: 540 GC-DGTFLLTQSGKVLACGLNEFNKLGLN 567
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 113 (44.8 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 40/130 (30%), Positives = 63/130 (48%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG +HS A+ + G V+ WG + GQ + + Q +P+ + VS+ + S
Sbjct: 98 TGSFHSGAVTESGVVYMWGENAAGQCAVAN----QQYVPEP----SPVSISDSETSPSLA 149
Query: 62 L-VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ +L G H+LAL+ E++ WG T QLGL + P++V+ LA V+Q
Sbjct: 150 VRILQLACGEEHTLALSLSREIWAWG--TGCQLGLITTTFPVTK-PQKVEHLAGRVVLQV 206
Query: 121 CAGYSHCLVL 130
G H L L
Sbjct: 207 ACGAFHSLAL 216
Score = 103 (41.3 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
SH+ +L + ++Y+WG+N +GQ+G + TTV + +V S N + +A G ++S
Sbjct: 563 SHSL--ALTAKSQVYSWGSNTFGQLGHSEFPTTVPRLSKVSS-EN-GVWSVAAGQDYSLF 618
Query: 221 LSKSVS---RLYAFGIGSAVQLDS-PK--SVHKTPQLIHGPWIASPVAMTAGEDSLVSHS 274
L + LY G + D+ P+ S KTP L+ + +TAG+DS ++
Sbjct: 619 LVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTKTPVLLSCSKLGYISRVTAGKDSYLA-- 676
Query: 275 GGLVVKKI--YSGGDHSIVTVTKSSDGVLSD-DFRVLNP 310
LV K I Y H + + + LS+ ++L P
Sbjct: 677 --LVDKNIMGYIASLHELASTERRFYSKLSEIKSQILRP 713
Score = 86 (35.3 bits), Expect = 0.00040, Sum P(5) = 0.00040
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G+ H + L + GEV+++G L + ++ P +S + A G+ H
Sbjct: 49 GVRHGVLLTEDGEVYSFGT-------LPWKSESAEICP------SSPLLESALVGH-H-- 92
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-----VSV 117
V+T TG +HS A+ + G V+ WG + GQ + + + P + + V +
Sbjct: 93 VITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRI 152
Query: 118 VQACAGYSHCLVLTSS 133
+Q G H L L+ S
Sbjct: 153 LQLACGEEHTLALSLS 168
Score = 83 (34.3 bits), Expect = 0.00075, Sum P(5) = 0.00075
Identities = 34/109 (31%), Positives = 51/109 (46%)
Query: 29 LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST-TGLWHSLALNDCGEVFTWGG 87
LE ++ S+P + ++ + +A + +VLT T +G +L + EV+TWG
Sbjct: 469 LEGGSRRL-SLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGK 527
Query: 88 DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV 136
GQLG D + P VK L V+ AG SH L LT+ V
Sbjct: 528 GKEGQLG--HGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQV 574
Score = 78 (32.5 bits), Expect = 0.00024, Sum P(5) = 0.00024
Identities = 26/101 (25%), Positives = 52/101 (51%)
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
E++TWG + GQ+G + + +P V+ L + + G +HS L+ S++Y++G
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLDGKEVIHLEAGGSHSLALTAK-SQVYSWG 578
Query: 233 IGSAVQL---DSPKSVHKTPQLI--HGPWIASPVAMTAGED 268
+ QL + P +V + ++ +G W ++ AG+D
Sbjct: 579 SNTFGQLGHSEFPTTVPRLSKVSSENGVW-----SVAAGQD 614
Score = 53 (23.7 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 21/79 (26%), Positives = 33/79 (41%)
Query: 854 TFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLA 913
T K + + Q ++ T + GG S+++ P R YT FY
Sbjct: 983 TPQEKTKWLRAISQAVDQALRGTSDFPLYGGG---SSVQRQEPPISRSAKYT-FYKD--T 1036
Query: 914 TVCDIRIDYFRWISGRPNG 932
+ D D RW+SG+P+G
Sbjct: 1037 RLKDATYDG-RWLSGKPHG 1054
Score = 47 (21.6 bits), Expect = 4.9e-06, Sum P(5) = 4.9e-06
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 703 FPDFPIVAAYPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNY 758
+PD + + +NG+ G EY ED + + G +CG +Y+Y
Sbjct: 1060 WPDGKMYSGMFRNGLED-GYGEYRIPNKALNKEDHYVGH---WKEGKMCGQGVYSY 1111
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 533 WIVVFG-SLIGICGLGHLDFYRELLLSISNFCDRLFLVGNSVLL-VLCVLMFYPLSHIHR 590
++V+ G L+ + L+ +ELL +S D N+ L+ +L +L F P+ +H
Sbjct: 786 FLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDE-----NTQLMEILNMLFFLPIRRLHN 840
Query: 591 F 591
+
Sbjct: 841 Y 841
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(5) = 2.1e-06
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 549 LDFYRELLLSISNF 562
LD Y E S+SNF
Sbjct: 773 LDSYTEYCTSVSNF 786
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(5) = 1.1e-06
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1130 GTLCGLAIYNY 1140
G +CG +Y+Y
Sbjct: 1101 GKMCGQGVYSY 1111
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(5) = 4.9e-06
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
++ Q +++S ++ SLQ+ + DL VF
Sbjct: 1568 VIQQTFEEISQSVLASLQEDFLWSMDDLFPVF 1599
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 113 (44.8 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 40/129 (31%), Positives = 58/129 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +H A+ + G V WG +++GQ G+ D+ P V+VV +
Sbjct: 88 GSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTP--------VTVVDDETHPPQLV 139
Query: 63 -VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
VL G H+LAL++ EV+ WG QLGL + P++V+ L VVQ
Sbjct: 140 RVLNVACGAQHTLALSNKHEVWAWGSGC--QLGLVTNVFPVWK-PQKVEHLVGRYVVQIA 196
Query: 122 AGYSHCLVL 130
G H L L
Sbjct: 197 CGAFHSLAL 205
Score = 98 (39.6 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 36/157 (22%), Positives = 76/157 (48%)
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
+S + SL + E+++WG GQ+G + +P ++SL + I GANHS
Sbjct: 510 ESRNLLPSLFT--EVWSWGKGHEGQLG-HGDYLPRLQPLCIKSLSKKEVVKITAGANHSL 566
Query: 220 VLSKSVSRLYAFG---IGSAVQLDSPKSVHKTPQLIHG--PW-IAS----PVAMTAGE-- 267
L+ ++Y++G G +++SP +V + G W +A+ + + G+
Sbjct: 567 ALTAQC-QVYSWGSEKFGQLGRMNSPSTVPNLTTVSDGIRVWDVAAGQTHTLLLADGDCY 625
Query: 268 DSLVSHSGGLV--VKKIYSGGDHSIVTVTKSSDGVLS 302
++ +SG + V +++ GG + + +++ G +S
Sbjct: 626 QPILYYSGEQIGYVNQVFGGGLNCLALADQNAMGFIS 662
Score = 86 (35.3 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 31/119 (26%), Positives = 52/119 (43%)
Query: 21 GDTHGQLGLESADKKS-QSIP-KRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
G HG L +E S P K V+ + V+++ H V++ + G +H A+ +
Sbjct: 40 GSLHGLLLIEGGQVYSFGEQPWKPVEPPPASLVLESTLSGQH--VISVSAGSYHCSAVTE 97
Query: 79 CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-----VSVVQACAGYSHCLVLTS 132
G V WG +++GQ G+ D+ P V + V V+ G H L L++
Sbjct: 98 DGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLALSN 156
Score = 54 (24.1 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 866 LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFY-MPDLATVCDIRIDYFR 924
L+ +N +E L S ++ GRT + + G V+ T+ Y + D + + R
Sbjct: 969 LRAINQAIDEVLVSGMN--GRT--RVSRSSQKGEPPVSRTSNYTFSKEGRLKDAKYEG-R 1023
Query: 925 WISGRPNG 932
W+SG+P+G
Sbjct: 1024 WLSGKPHG 1031
Score = 40 (19.1 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 546 LGHLDFYRELLLSISN 561
L HL+ Y LLL ++N
Sbjct: 813 LQHLNGYNRLLLKLAN 828
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 152 (58.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 61/199 (30%), Positives = 92/199 (46%)
Query: 53 QACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL 112
Q CAG +H V+T L+ +N G G HGQLG D+ S PK V+ L
Sbjct: 355 QVCAGDAHFAVVTVEKELY--TWVNMQG-----GSKLHGQLG--HGDRASYRQPKHVEKL 405
Query: 113 ASVSVVQACAGYSHCLVLTSSGVVTCTHKEN-GC-GSDPSQG---VQSNLVQ-------- 159
SV + G + +T G + + GC G + S G ++ LV
Sbjct: 406 QGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVD 465
Query: 160 -----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
DSH I +L +Y+WG EYG++G++ S V PQ+VE L I + CG
Sbjct: 466 QVSCGDSH--IMALTRSKSVYSWGCGEYGRLGLD-SEDDVYSPQKVEVQRGLCIVNVCCG 522
Query: 215 ANHSFVLSKSVSRLYAFGI 233
++ SF+L+ + ++ A G+
Sbjct: 523 SDGSFLLTLT-GKVLACGL 540
Score = 131 (51.2 bits), Expect = 0.00022, P = 0.00022
Identities = 38/141 (26%), Positives = 75/141 (53%)
Query: 168 LNSPGELYTWGNNEYGQMGINNS-NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+ G+LY++G++ YG +G+N S + V +P V+ +N P+ ++CG +H L++S S
Sbjct: 423 ITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKS 482
Query: 227 RLYAFGIGS--AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
+Y++G G + LDS V+ +PQ + V + G D S L K +
Sbjct: 483 -VYSWGCGEYGRLGLDSEDDVY-SPQKVEVQRGLCIVNVCCGSDG--SFLLTLTGKVLAC 538
Query: 285 G-GDHSIVTVTKSSDGVLSDD 304
G +H+ + + + + G+++ +
Sbjct: 539 GLNEHNKLGLNQYTAGIINHE 559
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 72/248 (29%), Positives = 109/248 (43%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
HS + G+V T G ++ G L+++ + PK V+ L Q AG H V
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFR--PKLVEALKGTPCKQVAAGL-HFTVF 230
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAG 123
S G H+ +T G +THGQLG ++ D+ + + +K + V VQ AG
Sbjct: 231 LSREG--HA---------YTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPV--VQIAAG 277
Query: 124 YSHCLVLTSSG-VVTCTHKENGC-GSDPSQG-VQSNLVQ---------------DSHTTI 165
S+ L +T G V + N C G Q +Q ++Q D H
Sbjct: 278 PSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAV- 336
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANH-SFVLSKS 224
+L+S G +YTWG G +G + N +T PQ + +L N +A+ C +FVL +
Sbjct: 337 -ALDSNGRVYTWGKGYCGALGHGDENDKIT-PQVLVNLNNC-LAVQVCARKRKTFVLVEG 393
Query: 225 VSRLYAFG 232
LY FG
Sbjct: 394 -GLLYGFG 400
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 68/255 (26%), Positives = 117/255 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS-VVQACAGYSHC 61
GL ++ L+ G +T G +THGQLG D + +PK V+ L ++ VVQ AG S+
Sbjct: 224 GLHFTVFLSREGHAYTCGSNTHGQLG--HGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
L +T G +S G F G HG+ E + Q+ KR KG + +++
Sbjct: 282 LAVTQD-GSVYSFG---SGSNFCLG---HGEQQDELQPRVIQAF-KR-KG---IHILRVS 329
Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGS----DPSQGVQSNLVQDSHTTITS---------- 167
AG H + L S+G V T + CG+ D + + ++ + + +
Sbjct: 330 AGDEHAVALDSNGRVY-TWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTF 388
Query: 168 -LNSPGELYTWGNNEYGQMGINNSNTT--VTKPQRVESLVNLPIALIACGANHSFVLSKS 224
L G LY +G +G +G + + V +P+ +E L ++ ++ G H+ V+++
Sbjct: 389 VLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQR 448
Query: 225 VSRLYAFGIGSAVQL 239
R++ FG QL
Sbjct: 449 -GRIFGFGDNERAQL 462
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/189 (29%), Positives = 83/189 (43%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQA 120
VL + G HSL L D VFT G +++GQ G + + + S + L VVQ
Sbjct: 167 VLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQV 226
Query: 121 CAGYSHCLVLTSSGVV-TC---THKENGCG-----SDPSQ--G--VQSNLVQDSH--TTI 165
G H L T G V C + G G S P++ G N+VQ S
Sbjct: 227 VCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYGDCC 286
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+++ G+L+ WGN+EY Q+ T V P+ + + I ACG + VL++
Sbjct: 287 LAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIG-KIKEAACGGTGNIVLTEE- 344
Query: 226 SRLYAFGIG 234
++ +G G
Sbjct: 345 GAVFVWGYG 353
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 74/256 (28%), Positives = 103/256 (40%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQACAGYSH 60
G HSL L DC VF+ G + +GQ G + + S +V + VVQ G H
Sbjct: 183 GRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVVCGQDH 242
Query: 61 CLVLTSTTGLWHSLALNDCGEVFT--WGGDTHGQLGLESADKKSQSIPKRVKG-LASVSV 117
L LT D GEV++ WG D GQ GL D S+P ++ G LA V+V
Sbjct: 243 SLFLT------------DKGEVYSCGWGAD--GQTGLGHYD--ITSVPTKLGGDLAGVNV 286
Query: 118 VQACAGYSHCLVLTSSG--------------VVTCTHKENGCGSDPSQGV-QSNLVQDSH 162
VQ CL +++ G VT + + N P GV +
Sbjct: 287 VQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACGG 346
Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK--PQRVESLVNL-P---IALIACGAN 216
T LN G ++ WG G+ G N T + P + L P ++ I CG +
Sbjct: 347 TGCAVLNGEGHVFVWGYGILGK-GPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLS 405
Query: 217 HSFVLSKSVSRLYAFG 232
H F S L+ +G
Sbjct: 406 H-FAALTSKGELFVWG 420
Score = 143 (55.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 53/189 (28%), Positives = 80/189 (42%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQA 120
VL + G HSL L DC VF+ G + +GQ G + + S +V + VVQ
Sbjct: 177 VLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQV 236
Query: 121 CAGYSHCLVLTSSG-VVTC---THKENGCG-----SDPSQ------GVQSNLVQDSHTTI 165
G H L LT G V +C + G G S P++ GV V
Sbjct: 237 VCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGDCC 296
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
++++ G L+ WGN+EY Q+ +T V P+ + + ACG VL+
Sbjct: 297 LAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNGE- 355
Query: 226 SRLYAFGIG 234
++ +G G
Sbjct: 356 GHVFVWGYG 364
>UNIPROTKB|E1C5R2 [details] [associations]
symbol:LOC100858232 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:ANSTEDH EMBL:AADN02016129
EMBL:AADN02016130 IPI:IPI00579431 Ensembl:ENSGALT00000032228
Uniprot:E1C5R2
Length = 351
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 728 TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLS 787
+R IWF + L+GT G+A+YN+ PFP AL+KK+ D L+DL++L
Sbjct: 99 SRLIWFPTQVSSHDDTFLLVGTFFGMALYNHCQTPFPFPRALFKKMRDVEPTLEDLEELM 158
Query: 788 PTLAKSLQDIL-DYREPDLEDVFGITF 813
P + ++L++IL + E LE + +TF
Sbjct: 159 PAVGRNLKNILKEESEHKLESLH-MTF 184
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 162 (62.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 62/216 (28%), Positives = 102/216 (47%)
Query: 37 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
+S P+++ + S S Q CAG +H V+T L+ +N G G HGQLG
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELY--TWVNMQG-----GTKLHGQLG- 407
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN-GC-GSDPSQGV 153
DK S PK V+ L ++ Q G + +T G + + GC G D G
Sbjct: 408 -HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGP 466
Query: 154 Q-----------SNLVQ-----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
+ +N V+ D+H + + N E+Y+WG EYG++G+++ T P
Sbjct: 467 EVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNK--EVYSWGCGEYGRLGLDSEEDYYT-P 523
Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
Q+V+ L I + CG + +F+L++S ++ A G+
Sbjct: 524 QKVDVPKALIIVAVQCGCDGTFLLTQS-GKVLACGL 558
Score = 144 (55.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 54/198 (27%), Positives = 91/198 (45%)
Query: 103 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPS-- 150
+S P+++ + S S Q CAG +H V+T + T H + G G S
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 151 --------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN-SNTTVTKPQRVE 201
QG V + G+LY +G++ YG MG++ + V +P ++
Sbjct: 416 QPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLN 475
Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS--AVQLDSPKSVHKTPQLIHGPWIAS 259
+N P+ ++CG NH VL+++ +Y++G G + LDS + + TPQ + P
Sbjct: 476 FFLNNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYY-TPQKVDVPKALI 533
Query: 260 PVAMTAGEDS--LVSHSG 275
VA+ G D L++ SG
Sbjct: 534 IVAVQCGCDGTFLLTQSG 551
Score = 40 (19.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 354 GCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
GC +G+FL ++ + +C +F+ + L+
Sbjct: 540 GC-DGTFLLTQSGKVLACGLNEFNKLGLN 567
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 162 (62.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 62/216 (28%), Positives = 102/216 (47%)
Query: 37 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
+S P+++ + S S Q CAG +H V+T L+ +N G G HGQLG
Sbjct: 375 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELY--TWVNMQG-----GTKLHGQLG- 426
Query: 96 ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN-GC-GSDPSQGV 153
DK S PK V+ L ++ Q G + +T G + + GC G D G
Sbjct: 427 -HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGP 485
Query: 154 Q-----------SNLVQ-----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
+ +N V+ D+H + + N E+Y+WG EYG++G+++ T P
Sbjct: 486 EVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNK--EVYSWGCGEYGRLGLDSEEDYYT-P 542
Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
Q+V+ L I + CG + +F+L++S ++ A G+
Sbjct: 543 QKVDVPKALIIVAVQCGCDGTFLLTQS-GKVLACGL 577
Score = 141 (54.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 54/198 (27%), Positives = 90/198 (45%)
Query: 103 QSIPKRVKGLAS-VSVVQACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPS-- 150
+S P+++ + S S Q CAG +H V+T + T H + G G S
Sbjct: 375 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 434
Query: 151 --------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN-SNTTVTKPQRVE 201
QG V + G+LY +G++ YG MG++ + V +P ++
Sbjct: 435 QPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLN 494
Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS--AVQLDSPKSVHKTPQLIHGPWIAS 259
N P+ ++CG NH VL+++ +Y++G G + LDS + + TPQ + P
Sbjct: 495 FFSNNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYY-TPQKVDVPKALI 552
Query: 260 PVAMTAGEDS--LVSHSG 275
VA+ G D L++ SG
Sbjct: 553 IVAVQCGCDGTFLLTQSG 570
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 354 GCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
GC +G+FL ++ + +C +F+ + L+
Sbjct: 559 GC-DGTFLLTQSGKVLACGLNEFNKLGLN 586
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 149 (57.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 70/263 (26%), Positives = 116/263 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 75 GGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSH-- 130
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ AL + G VF WG D +G +GL KKS +P +V+ VV+
Sbjct: 131 ----------TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ--LDTQVVKV 177
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG-CGSDPS--------QGVQSNLV------------ 158
+G H ++LT+ G + T E G G P QG++ LV
Sbjct: 178 ASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTR 237
Query: 159 -----QDSH--TTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
QD+ T +++ G +Y +G + Y Q+G + + PQ + S N +
Sbjct: 238 GRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFI-PQNLTSFKNSTKSW 296
Query: 211 IA-CGANHSFVLSKSVSRLYAFG 232
+ G H V S + Y+ G
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLG 319
Score = 127 (49.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 58/189 (30%), Positives = 91/189 (48%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
G V T G GD GQLGL +S+ +R K A V ++Q V+ + G H
Sbjct: 35 GLVLTLGQGDV-GQLGL------GESVLERKKP-ALVPLLQD--------VVQAEAGGMH 78
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH LT
Sbjct: 79 TVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAALTE 136
Query: 133 SGVVTC--THKENG--CGS-DPSQG----VQSNL------VQDSHTTITSLNSPGELYTW 177
G V + ++N G +P + VQ L V + + L + G+LYT
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTL 196
Query: 178 GNNEYGQMG 186
G E GQ+G
Sbjct: 197 GCGEQGQLG 205
Score = 42 (19.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
R++A+G+G+ QL + + W SPV MT + L + V + SGG
Sbjct: 365 RVFAWGMGTNYQLGTGQE--------DDAW--SPVEMTGKQ--LENRE----VLTVSSGG 408
Query: 287 DHSIVTV 293
H+++ V
Sbjct: 409 QHTVLLV 415
>UNIPROTKB|I3LUF6 [details] [associations]
symbol:I3LUF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 GO:GO:0016567 GO:GO:0005622
GO:GO:0004842 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
Ensembl:ENSSSCT00000027666 OMA:NENRAGE Uniprot:I3LUF6
Length = 154
Score = 122 (48.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L PI
Sbjct: 21 YGMFTYHKDSYCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPI 80
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ DL + P LA L ++L Y E ++E+ F TF+
Sbjct: 81 VPSDQNTPVGICSVTTDDLCQIMPELAHGLSELLSY-EGNVEEDFYSTFQ 129
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/226 (23%), Positives = 99/226 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L + G+VF+WGG HGQLG S + + + P+ ++ L + + + AG
Sbjct: 169 GAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELE--PRLLEALQGLRMAEVAAG----- 221
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES---ADKKS---QSIPKRVKGLASVS 116
G WHS+ +++ G+++ WG + GQL L + +KK+ ++ GL
Sbjct: 222 ------G-WHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEE 274
Query: 117 VVQACAGY-SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELY 175
A G +H + + + + GSD V+++ HT + + +
Sbjct: 275 AALADVGAPAHFIAIQPFPALL----DLPLGSD---AVKASC-GSRHTAVVTRTGELYTW 326
Query: 176 TWGN-NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
WG + G +S+ VE L + + CG +++V
Sbjct: 327 GWGKYGQLGHKDSTSSDQPCRVEYFVER--QLEVRAVTCGPWNTYV 370
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 107 (42.7 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 43/153 (28%), Positives = 72/153 (47%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L + ++Y+WG+N +GQ+G + TTV + +V S N + +A G ++S L +
Sbjct: 572 ALTAKSQVYSWGSNTFGQLGHYDFPTTVPRLAKVSS-EN-GVWSVAAGQDYSLFLVDTED 629
Query: 227 ---RLYAFGIGSAVQLDSPKSVH---KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK 280
LY G + D+ H KTP L+ + +TAG+DS ++ LV K
Sbjct: 630 FQPGLYYSGRQDPAEGDNLPENHSGTKTPVLLSCSKLGYISRVTAGKDSYLA----LVDK 685
Query: 281 KI--YSGGDHSIVTVTKSSDGVLSD-DFRVLNP 310
+ Y H + T + LSD ++L P
Sbjct: 686 NVMGYIASLHELATTERRFYAKLSDIKSQILRP 718
Score = 102 (41.0 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G +H+ A+ + G + WG ++ GQ + + + P + + S++
Sbjct: 98 SGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAV------- 150
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+L G H+LAL+ E++ WG T QLGL + P++V+ LA V+Q
Sbjct: 151 RILQLACGEEHTLALSISREIWAWG--TGCQLGLITTTFPVTK-PQKVEHLAGRVVLQVA 207
Query: 122 AGYSHCLVL 130
G H L L
Sbjct: 208 CGAFHSLAL 216
Score = 81 (33.6 bits), Expect = 0.00095, Sum P(5) = 0.00095
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
E++TWG + GQ+G + + +P V+ L + + G HS L+ S++Y++G
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLDGKEVIYLEAGGYHSLALTAK-SQVYSWG 583
Query: 233 IGSAVQL---DSPKSVHKTPQLI--HGPWIASPVAMTAGED 268
+ QL D P +V + ++ +G W ++ AG+D
Sbjct: 584 SNTFGQLGHYDFPTTVPRLAKVSSENGVW-----SVAAGQD 619
Score = 56 (24.8 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 889 SNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
S+I+ P R YT + P L D D RW+SG+P+G
Sbjct: 1020 SSIQRQEPPISRSAKYTFYKDPRLK---DATYDG-RWLSGKPHG 1059
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(5) = 3.0e-05
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 703 FPDFPIVAAYPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNY 758
+PD + + +NG+ G EY ED + + G +CG +Y+Y
Sbjct: 1065 WPDGKMYSGMFRNGLED-GYGEYRIPNKALNKEDHYVGH---WKEGKMCGQGVYSY 1116
Score = 41 (19.5 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 533 WIVVFG-SLIGICGLGHLDFYRELLLSISNFCDRLFLVGNSVLL-VLCVLMFYPLSHIHR 590
++V+ G L+ + L+ +ELL +S D N+ L+ +L L F P+ +H
Sbjct: 791 FLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDE-----NTQLMEILNTLFFLPIRRLHN 845
Query: 591 F 591
+
Sbjct: 846 Y 846
Score = 38 (18.4 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1130 GTLCGLAIYNY 1140
G +CG +Y+Y
Sbjct: 1106 GKMCGQGVYSY 1116
Score = 37 (18.1 bits), Expect = 8.2e-06, Sum P(5) = 8.2e-06
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 549 LDFYRELLLSISNF 562
LD Y E SI+NF
Sbjct: 778 LDSYTEYCTSITNF 791
Score = 37 (18.1 bits), Expect = 3.0e-05, Sum P(5) = 3.0e-05
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
++ Q +++S ++ SLQ+ + DL VF
Sbjct: 1573 VIQQTFEEISQSVLASLQEDFLWSMDDLFPVF 1604
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00082
Identities = 41/172 (23%), Positives = 77/172 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G+ S+ L ++ G + +LGL+ + P+ A+V A +
Sbjct: 509 GIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEP 568
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V+ + G HS A+ G+ +T+G + HGQLG S ++ +P V GL ++ V
Sbjct: 569 VVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSC--RNSRVPHLVVGLRAMKVTVVAC 626
Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNL-VQDSHT-TITSL 168
G + + + + G V CT + G D G+ + ++++H +TS+
Sbjct: 627 GDAFTVAIGADGEV-CTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSV 677
Score = 105 (42.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 39/141 (27%), Positives = 65/141 (46%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L D G + T+G ++G LG + SQ PK V+ L +VQ G SH L +++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGNFTDVSQ--PKIVEALLGYEMVQVACGASHVLAVSNER- 468
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
EVF WG +G+LGL + + + P++V + G +V
Sbjct: 469 -----------EVFAWGRGDNGRLGLGTLE--CHNSPQQVAVPPEHEAQRVICGIDSSMV 515
Query: 130 LT-SSGVVTC-THKENGCGSD 148
LT ++ ++ C +++ N G D
Sbjct: 516 LTVNNQILACGSNRCNKLGLD 536
Score = 92 (37.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNS-NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
++ + G+ YT+G+N++GQ+G N+ N+ V P V L + + ++ACG + +
Sbjct: 581 AVTASGQCYTFGSNQHGQLGTNSCRNSRV--PHLVVGLRAMKVTVVACGDAFTVAIGAD- 637
Query: 226 SRLYAFGIGSAVQL---DSPKSVHKTPQL--IHGPWIASPVAMTAGEDSL 270
+ +G G+ +L D + + QL H P++ + VA G L
Sbjct: 638 GEVCTWGKGARGRLGRKDEETGMPRPVQLEETH-PYVVTSVACCHGNTLL 686
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 127 (49.8 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +H+ A+ D G+++ WG +GQLG S + + + P+ V ++Q G++H L
Sbjct: 1233 GQYHNAAVAD-GKLYMWGWGIYGQLGQGSCE--NIATPQLVSFFKFKKILQISLGHAHTL 1289
Query: 63 VLTSTTGLWHSLALNDCG-EVFTWGGDTHGQLGLESADK--KSQSIPKRVK-GLASVSVV 118
VL H A N CG E+F +G + GQLG ++D ++P R++ G S+ ++
Sbjct: 1290 VLCGAPNS-HMEA-NHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCSLRLI 1347
Score = 79 (32.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 168 LNSPGELYTWGNNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKS-V 225
++S LYTWG N Q+G + + V KP ++S + P+ + CG++ + V++ V
Sbjct: 1516 ISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDS-IERPM-YVDCGSDFTLVMTTDHV 1573
Query: 226 SRLYAFGIGSAVQL--DSPKSVHKTPQLI 252
R AFG S Q D SV + Q +
Sbjct: 1574 VR--AFGGNSNGQCGRDLGPSVERMRQRV 1600
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 140 (54.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 59/200 (29%), Positives = 88/200 (44%)
Query: 5 WH-SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W ++ L + G+V + G + GQLG+ +K +P+ ++ L VV AG H L
Sbjct: 110 WDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALA 167
Query: 64 LTST--TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
T T T W + L G G + L L K+ P RV GL S +VV A
Sbjct: 168 TTDTGSTFQWGT-GLASSGRRLCPGQN----LPLFLTAKE----PSRVTGLESSTVVCAV 218
Query: 122 AGYSHCLVLTSSG--VVTCTHKENGCGSDPS-----QGVQSNLVQDSHTT--------IT 166
AG H LT +G V +K S + Q V+++ QD T +
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLV 278
Query: 167 SLNSPGELYTWGNNEYGQMG 186
+ G+++TWG +YGQ+G
Sbjct: 279 AKTETGKVFTWGRADYGQLG 298
Score = 129 (50.5 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 53/183 (28%), Positives = 78/183 (42%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H+LA D G F WG GL S+ ++ Q++P + V G
Sbjct: 161 GLRHALATTDTGSTFQWG------TGLASSGRRLCPGQNLPLFLTAKEPSRVT----GLE 210
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
V+ + G HS +L D GE++ WG + HGQL + +P+RV+ V
Sbjct: 211 SSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLASLAT---FLPLPQRVEAHYFQDEKV 267
Query: 118 VQACAGYSHCLVLTSSG-VVTCTHKENG-CGSD-PSQGVQSNLVQDSHTTITSL-NS-PG 172
+G++H + T +G V T + G G S Q + QDS L NS P
Sbjct: 268 TAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLGSPEAQKHGEQDSSLAFQRLQNSVPS 327
Query: 173 ELY 175
L+
Sbjct: 328 PLH 330
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 66/288 (22%), Positives = 114/288 (39%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S A++ +F WG +++GQLGL K+ +P+++ C S C + +
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGL--GHKEDVLLPQQLSDF--------CK--SGC-IKSV 54
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
T G HS+ + D G +F G + GQLGL ++ + K L + Q G+
Sbjct: 55 TGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTI--CKPLLGCPIRQVACGWDF 112
Query: 127 CLVLTSSG-VVTCTHK---ENGCGSDPSQGVQSNLVQDSHTTITSL----------NSPG 172
++LT G V++C + G P + V ++ + + G
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTDTG 172
Query: 173 ELYTWGNN--EYGQMGINNSNT----TVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+ WG G+ N T +P RV L + + G++HS L+ +
Sbjct: 173 STFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDT-G 231
Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASP--VAMTAGEDSLVS 272
LY +G QL S + PQ + + A+ +G LV+
Sbjct: 232 ELYVWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVA 279
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G HS +L D GE++ WG + HGQL + +P+RV+ A Y
Sbjct: 218 VAGSDHSASLTDTGELYVWGRNKHGQLASLAT---FLPLPQRVE-----------AHYFQ 263
Query: 61 CLVLTSTTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
+T+ W H +A + G+VFTWG +GQLG ++Q ++ LA +
Sbjct: 264 DEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLGSPEAQKHGEQDSSLAFQRLQN 323
Query: 120 ACAGYSHCL 128
+ HCL
Sbjct: 324 SVPSPLHCL 332
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 56/232 (24%), Positives = 98/232 (42%)
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
S A++ +F WG +++GQLGL K+ +P+++ +++ G H +V+T
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGL--GHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVT 65
Query: 132 SSG-VVTC-THKEN--GCGSD----------PSQGVQSNLVQDSHTTITSLNSPGELYTW 177
G + C +K+ G G P G V L G++ +
Sbjct: 66 DGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSC 125
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G+N +GQ+G+ + PQ +E L + +A G H+ + + S + +G G A
Sbjct: 126 GSNAFGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAGLRHALATTDTGST-FQWGTGLA- 182
Query: 238 QLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
S + +L G + P+ +TA E S V+ V +G DHS
Sbjct: 183 --SSGR------RLCPGQNL--PLFLTAKEPSRVTGLESSTVVCAVAGSDHS 224
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 142 (55.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 74/258 (28%), Positives = 105/258 (40%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQACAGYSH 60
G HSL L D VF+ G ++HGQ G + + + S +V + VVQ G H
Sbjct: 179 GRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDH 238
Query: 61 CLVLTSTTGLWHSLALNDCGEVFT--WGGDTHGQLGLESADKKSQSIPKRVKG-LASVSV 117
L LT D GEV++ WG D GQ GL S P ++ G LA V+V
Sbjct: 239 SLFLT------------DKGEVYSCGWGAD--GQTGL--GHYNITSTPSKLGGDLAGVTV 282
Query: 118 VQACAGYSHCLVLTSSG--------------VVTCTHKENGCGSDPSQGV-QSNLVQDSH 162
VQ CL L++ G VT + + N P GV + V
Sbjct: 283 VQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGG 342
Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE-SLVNL----P---IALIACG 214
T LN+ G ++ WG YG +G P+ + +L L P ++ I CG
Sbjct: 343 TGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCG 399
Query: 215 ANHSFVLSKSVSRLYAFG 232
+H L+ L+ +G
Sbjct: 400 LSHFAALTNK-GELFVWG 416
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 142 (55.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + D G + T+G +GQ G S D + P V L + + + AG
Sbjct: 322 HSAVITDTGALLTFGWGLYGQCGQGSTDDELS--PTCVSSLLGIRIEEVAAG-------- 371
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSVVQACAG 123
LWH+ + G+V+ +GG+ GQLG D+ ++++PK ++ L +V+V G
Sbjct: 372 ----LWHTTCASSDGDVYAFGGNQFGQLGT-GCDQ-AETLPKLLEAPNLENVNVKTISCG 425
Query: 124 YSHCLVLTSSGVVTC 138
H V+T G V C
Sbjct: 426 ARHTAVITDEGRVFC 440
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSVVQACAGYSH 60
GLWH+ + G+V+ +GG+ GQLG D+ ++++PK ++ L +V+V G H
Sbjct: 371 GLWHTTCASSDGDVYAFGGNQFGQLGT-GCDQ-AETLPKLLEAPNLENVNVKTISCGARH 428
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
V+T D G VF WG + +GQLG+ ++ R+K ++ A
Sbjct: 429 TAVIT------------DEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCFPKNI--A 474
Query: 121 CAGYSHCLVL 130
C G+ H L+L
Sbjct: 475 C-GWWHTLLL 483
Score = 131 (51.2 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 44/142 (30%), Positives = 60/142 (42%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQS---IP--------KRVKGLASVSVVQA 54
H+LAL+D G+V+ WG GQLGL S + S IP K ++S V
Sbjct: 245 HTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQ 304
Query: 55 CAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS 114
C V G HS + D G + T+G +GQ G S D + P V L
Sbjct: 305 CGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELS--PTCVSSLLG 362
Query: 115 VSVVQACAGYSHCLVLTSSGVV 136
+ + + AG H +S G V
Sbjct: 363 IRIEEVAAGLWHTTCASSDGDV 384
Score = 123 (48.4 bits), Expect = 0.00064, P = 0.00064
Identities = 53/195 (27%), Positives = 78/195 (40%)
Query: 45 GLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS 104
G+ SVVQ C V G HS + D G + T+G +GQ G S D +
Sbjct: 296 GVNMSSVVQ-CGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELS- 353
Query: 105 IPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC----THKENGCGSDPSQGVQS----- 155
P V L + + + AG H +S G V + G G D ++ +
Sbjct: 354 -PTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAP 412
Query: 156 NLVQDSHTTITS-------LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPI 208
NL + TI+ + G ++ WG N+YGQ+GI + P V P
Sbjct: 413 NLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDR-NAPAEVRIKDCFP- 470
Query: 209 ALIACGANHSFVLSK 223
IACG H+ +L +
Sbjct: 471 KNIACGWWHTLLLGQ 485
>ASPGD|ASPL0000048173 [details] [associations]
symbol:hulD species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 GO:GO:0005634
GO:GO:0005737 EMBL:BN001307 EMBL:AACD01000029 GO:GO:0004842
GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021 RefSeq:XP_659478.1
ProteinModelPortal:Q5BC56 EnsemblFungi:CADANIAT00008528
GeneID:2874653 KEGG:ani:AN1874.2 HOGENOM:HOG000183057 OMA:PLKVQMG
OrthoDB:EOG4W3WW2 Uniprot:Q5BC56
Length = 1146
Score = 161 (61.7 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 63/235 (26%), Positives = 97/235 (41%)
Query: 874 NETLTSSISAGG--RTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
N ++ S S GG + +S + G +A FY P L+ D +W++ PN
Sbjct: 595 NPEISRSSSQGGVVQILSVLHKERTRLG--LASEDFYTPFLSERLDPLEMPVQWLARVPN 652
Query: 932 GSTRDFLCNYPFIFDAKAKTTL---LEMDQRIQMEHAMNQTNFYLFLQTFN--------- 979
T L +Y F+F A L + A T +++ F
Sbjct: 653 NKTLHLL-SYSFLFPPSALVIYFRALNYSAMSKYYEAALTTTKHVYQTAFGAMDIQDDVG 711
Query: 980 --PH---TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRG 1034
P ++ Y + + RDNI+ D + +L + + +PLKV G
Sbjct: 712 LIPRLRTSMTTYFVLVIRRDNILTDALNQLWRRERRELMRPLKVQMGMD---------EG 762
Query: 1035 EEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
EE D GGV++EF LL+ E LDP YGMF TR WF ++E + ++G
Sbjct: 763 EEGLDHGGVQQEFFRLLMAEALDPSYGMFTTDSRTRCSWFQPCSWEPLYKFEILG 817
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKP 197
P EL T G + +N TTV+ P
Sbjct: 397 PRELSTSGRSSRRSSSNSNPATTVSAP 423
>UNIPROTKB|Q5BC56 [details] [associations]
symbol:AN1874.2 "HECT domain protein (AFU_orthologue;
AFUA_2G04450)" species:227321 "Aspergillus nidulans FGSC A4"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0005634 GO:GO:0005737 EMBL:BN001307 EMBL:AACD01000029
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
RefSeq:XP_659478.1 ProteinModelPortal:Q5BC56
EnsemblFungi:CADANIAT00008528 GeneID:2874653 KEGG:ani:AN1874.2
HOGENOM:HOG000183057 OMA:PLKVQMG OrthoDB:EOG4W3WW2 Uniprot:Q5BC56
Length = 1146
Score = 161 (61.7 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 63/235 (26%), Positives = 97/235 (41%)
Query: 874 NETLTSSISAGG--RTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
N ++ S S GG + +S + G +A FY P L+ D +W++ PN
Sbjct: 595 NPEISRSSSQGGVVQILSVLHKERTRLG--LASEDFYTPFLSERLDPLEMPVQWLARVPN 652
Query: 932 GSTRDFLCNYPFIFDAKAKTTL---LEMDQRIQMEHAMNQTNFYLFLQTFN--------- 979
T L +Y F+F A L + A T +++ F
Sbjct: 653 NKTLHLL-SYSFLFPPSALVIYFRALNYSAMSKYYEAALTTTKHVYQTAFGAMDIQDDVG 711
Query: 980 --PH---TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRG 1034
P ++ Y + + RDNI+ D + +L + + +PLKV G
Sbjct: 712 LIPRLRTSMTTYFVLVIRRDNILTDALNQLWRRERRELMRPLKVQMGMD---------EG 762
Query: 1035 EEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
EE D GGV++EF LL+ E LDP YGMF TR WF ++E + ++G
Sbjct: 763 EEGLDHGGVQQEFFRLLMAEALDPSYGMFTTDSRTRCSWFQPCSWEPLYKFEILG 817
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKP 197
P EL T G + +N TTV+ P
Sbjct: 397 PRELSTSGRSSRRSSSNSNPATTVSAP 423
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 133 (51.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 62/213 (29%), Positives = 92/213 (43%)
Query: 24 HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVF 83
HGQLG S + + Q P+ V+ L V + AG G WHS ++D G+++
Sbjct: 10 HGQLGHGSLESEQQ--PRLVEALGGVPMRAVAAG-----------G-WHSACVSDGGDLY 55
Query: 84 TWGGDTHGQLGLES---ADKKSQS-----------IPKRVKGLASVSVVQACAGYSHCLV 129
WG + GQLGL S A+++++ +P G A +S+ QA + L
Sbjct: 56 VWGWNESGQLGLPSRAVAEEQAEDEDMGAGPEDPLLPGEPPGAAFISI-QA---FPALLD 111
Query: 130 LTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN 189
L V CGS HT +L GEL TWG +YGQ+G +
Sbjct: 112 LPLEPAVAAV----SCGS-------------RHTA--ALTRGGELNTWGWGKYGQLG-HG 151
Query: 190 SNTTVTKPQRVESL--VNLPIALIACGANHSFV 220
+ P+RVE L L + CG +++V
Sbjct: 152 DRASCDHPRRVEQLWAEGLRAQEVVCGPWNTYV 184
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/189 (28%), Positives = 81/189 (42%)
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQA 120
VL + G HSL L D VF+ G +++GQ G + + + S RV + VVQ
Sbjct: 176 VLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQV 235
Query: 121 CAGYSHCLVLTSSG-VVTC---THKENGCG-----SDPSQ------GVQSNLVQDSHTTI 165
G H L LT G V +C + G G S P++ GV V
Sbjct: 236 ACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATYGDCC 295
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
++++ G L+ WGN+EY Q+ +T V P+ + + ACG VL+
Sbjct: 296 LAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGE- 354
Query: 226 SRLYAFGIG 234
++ +G G
Sbjct: 355 GHVFVWGYG 363
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 73/258 (28%), Positives = 104/258 (40%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQACAGYSH 60
G HSL L D VF+ G +++GQ G + + + S RV + VVQ G H
Sbjct: 182 GRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDH 241
Query: 61 CLVLTSTTGLWHSLALNDCGEVFT--WGGDTHGQLGLESADKKSQSIPKRVKG-LASVSV 117
L LT D GEV++ WG D GQ GL S P ++ G LA V+V
Sbjct: 242 SLFLT------------DQGEVYSCGWGAD--GQTGL--GHYNITSTPTKLGGDLAGVNV 285
Query: 118 VQACAGYSHCLVLTSSG--------------VVTCTHKENGCGSDPSQGV-QSNLVQDSH 162
VQ CL +++ G VT + + N P GV Q
Sbjct: 286 VQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGG 345
Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE-SLVNL----P---IALIACG 214
T LN G ++ WG YG +G + P+ + +L L P ++ I CG
Sbjct: 346 TGCAVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCG 402
Query: 215 ANHSFVLSKSVSRLYAFG 232
+H L+ L+ +G
Sbjct: 403 LSHFAALTNR-GELFVWG 419
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 147 (56.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 43/133 (32%), Positives = 60/133 (45%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADK-KSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
H LALND G V +WG QLG ++ K + R GL G H
Sbjct: 295 HVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPK--------GIVHI--- 343
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSI--PKRVKGLASVSVVQAC 121
G +HS A++ G+VF WG ++ G+ G+ E+A +I P V L+ +V Q C
Sbjct: 344 --GAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQIC 401
Query: 122 AGYSHCLVLTSSG 134
G H + T G
Sbjct: 402 GGAHHSIAATQDG 414
Score = 125 (49.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 50/191 (26%), Positives = 81/191 (42%)
Query: 56 AGYSHCLVLTSTT-GLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGL 112
+ + H V+ G S AL D G+V+ WG G LG + A K Q+ PK + L
Sbjct: 225 SAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFD-AKTKVQTTPKLLPDL 283
Query: 113 ASVSVVQACAGYSHCLVLTSSGVVTC--THKENGCGS-----------DPSQ-GVQSNLV 158
+ + C G +H L L G V + ++N G P + G+ +V
Sbjct: 284 KKIKHL-VC-GDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIV 341
Query: 159 QDSHTTITS--LNSPGELYTWGNNEYGQMGIN----NSNTTVTKPQRVESLVNLPIALIA 212
S ++ G+++ WG N +G+ GI +S + P V+SL + I
Sbjct: 342 HIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQIC 401
Query: 213 CGANHSFVLSK 223
GA+HS ++
Sbjct: 402 GGAHHSIAATQ 412
Score = 53 (23.7 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLES 31
G H +AL +V TWG + G LG ++
Sbjct: 156 GGMHCVALTHDNKVLTWGVNDQGALGRDT 184
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 276 GLVVKKIYSGGDHSIVTVT 294
G+ K + +G DHSI T
Sbjct: 458 GIKAKAVAAGSDHSIAIDT 476
>UNIPROTKB|B3KV18 [details] [associations]
symbol:HECTD2 "cDNA FLJ16050 fis, clone HHDPC2003820,
highly similar to Probable E3 ubiquitin-protein ligase HECTD2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 SUPFAM:SSF56204
EMBL:AL161798 EMBL:AC023902 RefSeq:NP_877497.2 UniGene:Hs.596096
DNASU:143279 GeneID:143279 KEGG:hsa:143279 CTD:143279
HGNC:HGNC:26736 PharmGKB:PA134933711 HOGENOM:HOG000208451 KO:K12232
GenomeRNAi:143279 NextBio:84683 OrthoDB:EOG4B8JCJ EMBL:AK122629
IPI:IPI00646473 SMR:B3KV18 STRING:B3KV18 Ensembl:ENST00000536715
UCSC:uc009xty.1 HOVERGEN:HBG101900 Uniprot:B3KV18
Length = 365
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+L ++V R ++V D++ EL + D KK LKV F GE D GG+ +
Sbjct: 5 FLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT------------FVGEAGLDMGGLTK 51
Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
E+ +LL+++I P YGMF ++++ WFS ++ + + L+G
Sbjct: 52 EWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVG 95
Score = 122 (48.0 bits), Expect = 0.00051, P = 0.00051
Identities = 34/110 (30%), Positives = 58/110 (52%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L PI
Sbjct: 66 YGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPI 125
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ + DL + P LA L ++L + E ++E+ F TF+
Sbjct: 126 IPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSH-EGNVEEDFYSTFQ 174
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 112 (44.5 bits), Expect = 0.00039, P = 0.00039
Identities = 35/129 (27%), Positives = 57/129 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H++A G VF WG GL S ++ Q++P + G
Sbjct: 47 GLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL----FFTAKEPSRVTGLE 96
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + G HS +L D GEV+ WG + HGQL E+A +P++++ + V
Sbjct: 97 NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEAHCFQNEKV 153
Query: 118 VQACAGYSH 126
+G++H
Sbjct: 154 TAIWSGWTH 162
Score = 91 (37.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L + G+V + G ++ GQLG+ ++ +P+ ++ L VV AG H + T++ G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATAS-G 58
Query: 70 L---WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
+ W + L CG G T L L K+ P RV GL + + AG H
Sbjct: 59 IVFQWGT-GLASCGRRLC-PGQT---LPLFFTAKE----PSRVTGLENSKAMCVLAGSDH 109
Query: 127 CLVLTSSGVV 136
LT +G V
Sbjct: 110 SASLTDAGEV 119
Score = 80 (33.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGANH 217
SL GE+Y WG+N++GQ+ N + PQ++E+ N + I G H
Sbjct: 112 SLTDAGEVYVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 162
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 101 (40.6 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
D+H + SL + E+++WG + GQ+G + + +P V+SL + +A GA+HS
Sbjct: 541 DAH--LPSLQT--EVWSWGQGQDGQLGHGDLLPRL-QPDCVKSLNGKEVLKVAAGAHHSL 595
Query: 220 VLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQL 251
L+ S+++++G ++ QL +S PQL
Sbjct: 596 ALTAQ-SQVFSWGCNTSGQLGHMESPTTFPQL 626
Score = 100 (40.3 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 38/129 (29%), Positives = 56/129 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + + G V WG + HGQ GL P V V+ + A +
Sbjct: 94 GSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTP--------VGVLDSEATPPQTV 145
Query: 63 -VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+L G H+LAL+ EV+ WG QLGL ++ P++V L+ V+Q
Sbjct: 146 KILEVACGDQHTLALSAKHEVWAWGSGC--QLGLNTSTFPVWK-PQKVDHLSGRHVLQVA 202
Query: 122 AGYSHCLVL 130
G +H + L
Sbjct: 203 CGSAHSVAL 211
Score = 53 (23.7 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 869 LNSLNN--ETLTSSISAGGRTVSNIRTPA--PHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
L S+N E S + G S T P R +YT FY + + D + D R
Sbjct: 1027 LRSINQAVEQALSGLGHDGIPPSTGMTQRADPPISRTASYT-FYKD--SRLKDAKYDG-R 1082
Query: 925 WISGRPNG 932
W+SG+P+G
Sbjct: 1083 WVSGKPHG 1090
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 576 VLCVLMFYPLSHIHRF 591
VL L + P+ H+H +
Sbjct: 862 VLAHLFYLPIKHLHEY 877
Score = 38 (18.4 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 774 LDEPILLQDLKDLSPTLAKSLQDILDYREPDLED 807
L +LL D + P L S Q + + EP E+
Sbjct: 642 LQHTLLLADGDCIQPILYYSGQQVKEVPEPTEEE 675
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 119 (46.9 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+V+ + G HSLA N G++++WG +G+LGL + KS + P+ +KGL + ++ C
Sbjct: 440 VVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNI--KSYNKPQLIKGLRNKRILYVC 497
Query: 122 AGYSHCLVLTSS-GVVTCTHKEN---GCGSDPSQGVQSNLVQD-SHT-----------TI 165
AG SH + S+ V T + + G G+D LV+ +H
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNS 557
Query: 166 TSLNSPGELYTWG 178
+LN G++Y WG
Sbjct: 558 LALNVKGDVYVWG 570
Score = 116 (45.9 bits), Expect = 5.9e-05, Sum P(4) = 5.9e-05
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLA N G++++WG +G+LGL + KS + P+ +KGL + ++ CAG SH
Sbjct: 447 GSKHSLACNLHGDIYSWGYGGNGRLGLGNI--KSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA-SVSVVQAC 121
+ S V+TWG +LG D PK V+ L + V
Sbjct: 505 CIDSNYN------------VYTWGNGKFYKLG-HGNDDIDIYYPKLVECLNHNKKVCMLS 551
Query: 122 AGYSHCLVLTSSGVV 136
G + L L G V
Sbjct: 552 FGCFNSLALNVKGDV 566
Score = 89 (36.4 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL---PIALIACGANHS 218
H ++ L S G++YT G N+ G++G N + K V L+N+ I IACG N+
Sbjct: 762 HFSVFLLES-GKVYTAGYNKNGELG--NGEFNLKKKFGVPILLNICVNKIIKIACGYNYV 818
Query: 219 FVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
+S V +Y +G QL + + +H + + + + AG D HS +
Sbjct: 819 LCVS-DVGLVYGWGKNDKSQLGIGV-IKDFYEPVHVKNLTNVINIFAGYD----HSA-CI 871
Query: 279 VKKIYSGGDHSIVTVTKSSDGV 300
+ K+ G+ + V + +GV
Sbjct: 872 INKLLDKGNTNGVNNVNNVNGV 893
Score = 54 (24.1 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 22/92 (23%), Positives = 50/92 (54%)
Query: 794 LQD-ILDYREPDLEDVFGITFRNWYLLMSDDYFERLILI----FKQCLIYL-LQQPGVVD 847
++D I++Y+ +D+ +T +N + +S Y E+ IL+ FK+ L ++ L++ +
Sbjct: 2430 IEDLIINYQHKMKKDI--VTLKNAIIFVSKLYIEKPILLHSSYFKKNLFFVELKKKKHIQ 2487
Query: 848 STNGDITFNRKLSFCLQVLQKLNSLNNETLTS 879
T + +N S + + Q + +NN+ L++
Sbjct: 2488 RTF-KLPYN---SSTVHIYQMKDLINNQILSN 2515
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLG 28
G H+LA+ G +++WG + G +G
Sbjct: 357 GDMHTLAICTGGVLYSWGYNNFGCIG 382
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 41/184 (22%), Positives = 73/184 (39%)
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDF-KKPLKVND 1020
+ H++N+ N ++ P+ ++ +++ ++ D ++ + + T N+ KK L VND
Sbjct: 1697 INHSVNKLNKKKNVKR-EPN-ISSFID-NLNDDEKDKEFLNFIKGKTQNESDKKRLFVND 1753
Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD--PKY---GMFKEYEETRSIWFS 1075
S ED R + E LD Y +EE I F
Sbjct: 1754 ISCYKSGVPYNIPNINMEDENMYRNNISQEIQNENLDNNDNYVEINFVCIFEELCKI-FL 1812
Query: 1076 EDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGL 1135
F D M+ +I KE I + ++ E +T I+F ++ +Y L +
Sbjct: 1813 NIKFPD--MFKIIIKELFKYFIIYEKNLNDEINQTNKIYFYQN---HHTIYIPFFKLILM 1867
Query: 1136 AIYN 1139
AI N
Sbjct: 1868 AIIN 1871
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 435 VENDEH-FSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSL 490
++N ++ F NS N LC +D A E VR++ + I + SL
Sbjct: 1419 IQNKKYSFYKNSSNV-----LCSFIFDLYADFRNERVRTIFTIFLIKLGIEEIKNSL 1470
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 119 (46.9 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+V+ + G HSLA N G++++WG +G+LGL + KS + P+ +KGL + ++ C
Sbjct: 440 VVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNI--KSYNKPQLIKGLRNKRILYVC 497
Query: 122 AGYSHCLVLTSS-GVVTCTHKEN---GCGSDPSQGVQSNLVQD-SHT-----------TI 165
AG SH + S+ V T + + G G+D LV+ +H
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNS 557
Query: 166 TSLNSPGELYTWG 178
+LN G++Y WG
Sbjct: 558 LALNVKGDVYVWG 570
Score = 116 (45.9 bits), Expect = 5.9e-05, Sum P(4) = 5.9e-05
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLA N G++++WG +G+LGL + KS + P+ +KGL + ++ CAG SH
Sbjct: 447 GSKHSLACNLHGDIYSWGYGGNGRLGLGNI--KSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA-SVSVVQAC 121
+ S V+TWG +LG D PK V+ L + V
Sbjct: 505 CIDSNYN------------VYTWGNGKFYKLG-HGNDDIDIYYPKLVECLNHNKKVCMLS 551
Query: 122 AGYSHCLVLTSSGVV 136
G + L L G V
Sbjct: 552 FGCFNSLALNVKGDV 566
Score = 89 (36.4 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL---PIALIACGANHS 218
H ++ L S G++YT G N+ G++G N + K V L+N+ I IACG N+
Sbjct: 762 HFSVFLLES-GKVYTAGYNKNGELG--NGEFNLKKKFGVPILLNICVNKIIKIACGYNYV 818
Query: 219 FVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
+S V +Y +G QL + + +H + + + + AG D HS +
Sbjct: 819 LCVS-DVGLVYGWGKNDKSQLGIGV-IKDFYEPVHVKNLTNVINIFAGYD----HSA-CI 871
Query: 279 VKKIYSGGDHSIVTVTKSSDGV 300
+ K+ G+ + V + +GV
Sbjct: 872 INKLLDKGNTNGVNNVNNVNGV 893
Score = 54 (24.1 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 22/92 (23%), Positives = 50/92 (54%)
Query: 794 LQD-ILDYREPDLEDVFGITFRNWYLLMSDDYFERLILI----FKQCLIYL-LQQPGVVD 847
++D I++Y+ +D+ +T +N + +S Y E+ IL+ FK+ L ++ L++ +
Sbjct: 2430 IEDLIINYQHKMKKDI--VTLKNAIIFVSKLYIEKPILLHSSYFKKNLFFVELKKKKHIQ 2487
Query: 848 STNGDITFNRKLSFCLQVLQKLNSLNNETLTS 879
T + +N S + + Q + +NN+ L++
Sbjct: 2488 RTF-KLPYN---SSTVHIYQMKDLINNQILSN 2515
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLG 28
G H+LA+ G +++WG + G +G
Sbjct: 357 GDMHTLAICTGGVLYSWGYNNFGCIG 382
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 41/184 (22%), Positives = 73/184 (39%)
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDF-KKPLKVND 1020
+ H++N+ N ++ P+ ++ +++ ++ D ++ + + T N+ KK L VND
Sbjct: 1697 INHSVNKLNKKKNVKR-EPN-ISSFID-NLNDDEKDKEFLNFIKGKTQNESDKKRLFVND 1753
Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD--PKY---GMFKEYEETRSIWFS 1075
S ED R + E LD Y +EE I F
Sbjct: 1754 ISCYKSGVPYNIPNINMEDENMYRNNISQEIQNENLDNNDNYVEINFVCIFEELCKI-FL 1812
Query: 1076 EDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGL 1135
F D M+ +I KE I + ++ E +T I+F ++ +Y L +
Sbjct: 1813 NIKFPD--MFKIIIKELFKYFIIYEKNLNDEINQTNKIYFYQN---HHTIYIPFFKLILM 1867
Query: 1136 AIYN 1139
AI N
Sbjct: 1868 AIIN 1871
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 435 VENDEH-FSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSL 490
++N ++ F NS N LC +D A E VR++ + I + SL
Sbjct: 1419 IQNKKYSFYKNSSNV-----LCSFIFDLYADFRNERVRTIFTIFLIKLGIEEIKNSL 1470
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H++A G VF WG GL S ++ Q++P + G
Sbjct: 47 GLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL----FFTAKEPSRVTGLE 96
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + G HS +L D GEV+ WG + HGQL E+A +P++++ + V
Sbjct: 97 NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEAHCFQNEKV 153
Query: 118 VQACAGYSHCLVLT 131
+G++H + T
Sbjct: 154 TAIWSGWTHLVAQT 167
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L + G+V + G ++ GQLG+ ++ +P+ ++ L VV AG H + T++ G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATAS-G 58
Query: 70 L---WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
+ W + L CG G T L L K+ P RV GL + + AG H
Sbjct: 59 IVFQWGT-GLASCGRRLC-PGQT---LPLFFTAKE----PSRVTGLENSKAMCVLAGSDH 109
Query: 127 CLVLTSSGVV 136
LT +G V
Sbjct: 110 SASLTDAGEV 119
Score = 80 (33.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGANH 217
SL GE+Y WG+N++GQ+ N + PQ++E+ N + I G H
Sbjct: 112 SLTDAGEVYVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 162
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G HS +L D GEV+ WG + HGQL E+A +P++++ C + +
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEA--------HC--FQN 150
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
V +G H +A + G++FTWG +GQLG + + + K+ L +
Sbjct: 151 EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNS 210
Query: 121 CAGYSHCL 128
HCL
Sbjct: 211 MPSSPHCL 218
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H++A G VF WG GL S ++ Q++P + G
Sbjct: 47 GLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL----FFTAKEPSRVTGLE 96
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + G HS +L D GEV+ WG + HGQL E+A +P++++ + V
Sbjct: 97 NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEAHCFQNEKV 153
Query: 118 VQACAGYSHCLVLTSSG 134
+G++H + T +G
Sbjct: 154 TAIWSGWTHLVAQTETG 170
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 50/195 (25%), Positives = 88/195 (45%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L + G+V + G ++ GQLG+ ++ +P+ ++ L VV AG H + T++ G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATAS-G 58
Query: 70 L---WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
+ W + L CG G T L L K+ P RV GL + + AG H
Sbjct: 59 IVFQWGT-GLASCGRRLC-PGQT---LPLFFTAKE----PSRVTGLENSKAMCVLAGSDH 109
Query: 127 CLVLTSSGVVTC--THKENGCGSDPS-----QGVQSNLVQDSHTT--------ITSLNSP 171
LT +G V ++K ++ + Q ++++ Q+ T + +
Sbjct: 110 SASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTET 169
Query: 172 GELYTWGNNEYGQMG 186
G+++TWG +YGQ+G
Sbjct: 170 GKMFTWGRADYGQLG 184
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 110 (43.8 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG +H+ A+ D G V+ WG ++ GQ + + + P + + S + A
Sbjct: 103 TGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISD-SETSPLLAVR----- 156
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+L G H+LAL+ E++ WG T QLGL + P++V+ LA V+Q
Sbjct: 157 -ILQLACGEEHTLALSLSREIWAWG--TGCQLGLITTTFPVTK-PQKVEHLAGRVVLQVA 212
Query: 122 AGYSHCLVL 130
G H L L
Sbjct: 213 CGAFHSLAL 221
Score = 95 (38.5 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 43/155 (27%), Positives = 75/155 (48%)
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L + ++Y+WG+N +GQ+G ++ TTV + +V S N + +A G ++S L +
Sbjct: 577 ALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKVNS-EN-GVWSVAAGQDYSLFLVDTED 634
Query: 227 RLYAFGIGSAVQLDS------PK--SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
+ G+ + +LD P+ S K P L+ + +TAG+DS ++ LV
Sbjct: 635 --FQPGLCYSGRLDPTEGDNLPENHSGTKMPVLLSCSKLGYISRVTAGKDSYLA----LV 688
Query: 279 VKKI--YSGGDHSIVTVTKSSDGVLSD-DFRVLNP 310
K I Y H + T + LSD ++L P
Sbjct: 689 DKNIMGYIASLHELATTERRFYSKLSDIKSQILRP 723
Score = 78 (32.5 bits), Expect = 0.00072, Sum P(5) = 0.00072
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
E++TWG + GQ+G + + +P V+ L + + G HS L+ S++Y++G
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLDGKEVIHLEAGGYHSLALTAK-SQVYSWG 588
Query: 233 IGSAVQL---DSPKSVHKTPQLI--HGPWIASPVAMTAGED 268
+ QL D P +V + ++ +G W ++ AG+D
Sbjct: 589 SNTFGQLGHSDFPTTVPRLAKVNSENGVW-----SVAAGQD 624
Score = 56 (24.8 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 889 SNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
S+I+ P R YT + P L D D RW+SG+P+G
Sbjct: 1025 SSIQRQEPPISRSAKYTFYKDPRLK---DATYDG-RWLSGKPHG 1064
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(5) = 0.00016
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 703 FPDFPIVAAYPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNY 758
+PD + + +NG+ G EY ED + + G +CG +Y+Y
Sbjct: 1070 WPDGKMYSGMFRNGLED-GYGEYRIPNKALNKEDHYVGH---WKEGKMCGQGVYSY 1121
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1130 GTLCGLAIYNY 1140
G +CG +Y+Y
Sbjct: 1111 GKMCGQGVYSY 1121
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 549 LDFYRELLLSISNF 562
LD Y E SI+NF
Sbjct: 783 LDSYTEYCTSITNF 796
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(5) = 0.00016
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
++ Q +++S ++ SLQ+ + DL VF
Sbjct: 1578 VIQQTFEEISQSVLASLQEDFLWSMDDLFPVF 1609
>UNIPROTKB|J9NW19 [details] [associations]
symbol:SMURF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119
SMART:SM00456 GO:GO:0016567 GO:GO:0005622 GO:GO:0004842
Gene3D:2.20.70.10 SUPFAM:SSF51045 SUPFAM:SSF56204
GeneTree:ENSGT00670000098006 EMBL:AAEX03004280
Ensembl:ENSCAFT00000049516 Uniprot:J9NW19
Length = 556
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 197 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 244
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 245 EWLYLLCHEMLNPYYGLFQ 263
>UNIPROTKB|F1RFK1 [details] [associations]
symbol:F1RFK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000008 InterPro:IPR000569 InterPro:IPR001202
InterPro:IPR008973 Pfam:PF00168 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 GO:GO:0016567 GO:GO:0005622 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0004842 Gene3D:2.20.70.10
SUPFAM:SSF51045 SUPFAM:SSF56204 EMBL:FP102574
GeneTree:ENSGT00670000098006 Ensembl:ENSSSCT00000008348
Uniprot:F1RFK1
Length = 563
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 372 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 419
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 420 EWLYLLCHEMLNPYYGLFQ 438
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 141 (54.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 42/143 (29%), Positives = 71/143 (49%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESAD-KKSQSI---PKRVKGLASVSVVQACAGYSHC 61
HSLAL G +++WG + G+LGL + + KK I P+R+ ++ AG S+
Sbjct: 258 HSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQIIGMAAGKSYS 317
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQA 120
+ T T ++++WG + +GQLG+ +D S S P+RV GL S +
Sbjct: 318 VAWTDT-------------DIYSWGLN-NGQLGI--SDHISVVSTPRRVAGLLSPVIHAV 361
Query: 121 CAGYSH-CLVLTSSGVVTCTHKE 142
C + CL+ +S + C + +
Sbjct: 362 CTTRATICLLQNNSIIAFCNYNQ 384
>UNIPROTKB|F1NFN4 [details] [associations]
symbol:SMURF1 "E3 ubiquitin-protein ligase" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006611 "protein export from
nucleus" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030279 "negative regulation of ossification"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=IEA]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0032801 "receptor catabolic process"
evidence=IEA] [GO:0034394 "protein localization to cell surface"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0048185 "activin binding" evidence=IEA]
[GO:0070411 "I-SMAD binding" evidence=IEA] [GO:0070412 "R-SMAD
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR000008
InterPro:IPR000569 InterPro:IPR001202 InterPro:IPR008973
InterPro:IPR024928 Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119
SMART:SM00239 SMART:SM00456 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005737 GO:GO:0030154 GO:GO:0043161 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0030509 GO:GO:0031398
GO:GO:0030279 GO:GO:0004842 GO:GO:0000209 GO:GO:0034394
Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0006611 GO:GO:0042787
GO:GO:0030512 GO:GO:0032801 GO:GO:0030579 SUPFAM:SSF56204
GeneTree:ENSGT00670000098006 OMA:VSCEELG EMBL:AADN02023778
IPI:IPI00598175 Ensembl:ENSGALT00000007417 Uniprot:F1NFN4
Length = 729
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 370 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 417
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 418 EWLYLLCHEMLNPYYGLFQ 436
>UNIPROTKB|I3LTD6 [details] [associations]
symbol:SMURF1 "E3 ubiquitin-protein ligase" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000008 InterPro:IPR000569 InterPro:IPR001202
InterPro:IPR008973 InterPro:IPR024928 Pfam:PF00168 Pfam:PF00397
PIRSF:PIRSF001569 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237
SMART:SM00119 SMART:SM00239 SMART:SM00456 UniPathway:UPA00143
GO:GO:0005622 InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
GO:GO:0004842 Gene3D:2.20.70.10 SUPFAM:SSF51045 SUPFAM:SSF56204
GeneTree:ENSGT00670000098006 OMA:VSCEELG EMBL:FP565331
Ensembl:ENSSSCT00000028241 Uniprot:I3LTD6
Length = 731
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 372 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 419
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 420 EWLYLLCHEMLNPYYGLFQ 438
>MGI|MGI:1923038 [details] [associations]
symbol:Smurf1 "SMAD specific E3 ubiquitin protein ligase 1"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO;ISS;IBA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=ISO;IBA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0006611 "protein export from nucleus"
evidence=ISO] [GO:0007179 "transforming growth factor beta receptor
signaling pathway" evidence=IBA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;IMP] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISO;ISS] [GO:0030279
"negative regulation of ossification" evidence=IMP] [GO:0030509
"BMP signaling pathway" evidence=ISO] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=ISO] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=ISO] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=ISO] [GO:0032801
"receptor catabolic process" evidence=ISO] [GO:0033267 "axon part"
evidence=ISO] [GO:0034394 "protein localization to cell surface"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS;IBA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048185 "activin binding"
evidence=ISO] [GO:0070411 "I-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] Pfam:PF00632
InterPro:IPR000008 InterPro:IPR000569 InterPro:IPR001202
InterPro:IPR008973 InterPro:IPR024928 Pfam:PF00168 Pfam:PF00397
PIRSF:PIRSF001569 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237
SMART:SM00119 SMART:SM00239 SMART:SM00456 UniPathway:UPA00143
MGI:MGI:1923038 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0033267 GO:GO:0030154 GO:GO:0043161 GO:GO:0043025
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0030509
GO:GO:0007179 GO:GO:0031398 GO:GO:0030279 GO:GO:0004842
GO:GO:0000209 GO:GO:0034394 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0006611 GO:GO:0042787 GO:GO:0030512 GO:GO:0032801
GO:GO:0030579 SUPFAM:SSF56204 HOVERGEN:HBG004134 eggNOG:COG5021
HOGENOM:HOG000208451 GeneTree:ENSGT00670000098006 KO:K04678
CTD:57154 OrthoDB:EOG47PX58 EMBL:AK015264 EMBL:AK154491
EMBL:BC029097 IPI:IPI00331652 RefSeq:NP_001033716.1
RefSeq:NP_083714.3 UniGene:Mm.27735 ProteinModelPortal:Q9CUN6
SMR:Q9CUN6 IntAct:Q9CUN6 MINT:MINT-1340776 STRING:Q9CUN6
PhosphoSite:Q9CUN6 PRIDE:Q9CUN6 Ensembl:ENSMUST00000085684
GeneID:75788 KEGG:mmu:75788 UCSC:uc009alv.1 NextBio:343970
Bgee:Q9CUN6 CleanEx:MM_SMURF1 Genevestigator:Q9CUN6
GermOnline:ENSMUSG00000038780 Uniprot:Q9CUN6
Length = 731
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 372 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 419
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 420 EWLYLLCHEMLNPYYGLFQ 438
>RGD|1594738 [details] [associations]
symbol:Smurf1 "SMAD specific E3 ubiquitin protein ligase 1"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=ISO;IBA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006611 "protein export from
nucleus" evidence=IEA;ISO] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=IBA] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030279 "negative regulation of ossification"
evidence=IEA;ISO] [GO:0030509 "BMP signaling pathway"
evidence=IEA;ISO] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA;ISO]
[GO:0030516 "regulation of axon extension" evidence=ISS]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA;ISO] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA;ISO] [GO:0032801 "receptor catabolic
process" evidence=IEA;ISO] [GO:0033267 "axon part" evidence=IDA]
[GO:0034394 "protein localization to cell surface"
evidence=IEA;ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO;IBA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0048185 "activin binding" evidence=IEA;ISO]
[GO:0070411 "I-SMAD binding" evidence=IEA;ISO] [GO:0070412 "R-SMAD
binding" evidence=IEA;ISO] Pfam:PF00632 InterPro:IPR000008
InterPro:IPR000569 InterPro:IPR001202 InterPro:IPR008973
InterPro:IPR024928 Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119
SMART:SM00239 SMART:SM00456 UniPathway:UPA00143 RGD:1594738
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0033267
GO:GO:0043161 GO:GO:0043025 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 GO:GO:0030516 GO:GO:0030509 GO:GO:0007179
GO:GO:0031398 GO:GO:0030279 GO:GO:0004842 GO:GO:0000209
GO:GO:0034394 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0006611
GO:GO:0042787 GO:GO:0030512 GO:GO:0032801 GO:GO:0030579
SUPFAM:SSF56204 GeneTree:ENSGT00670000098006 OrthoDB:EOG47PX58
IPI:IPI00566489 ProteinModelPortal:D3ZCF5
Ensembl:ENSRNOT00000031901 Uniprot:D3ZCF5
Length = 731
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 372 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 419
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 420 EWLYLLCHEMLNPYYGLFQ 438
>ZFIN|ZDB-GENE-040426-2744 [details] [associations]
symbol:smurf1 "SMAD specific E3 ubiquitin protein
ligase 1" species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;IBA] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0007179 "transforming growth factor beta receptor signaling
pathway" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0016874 "ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS50020
PROSITE:PS50237 SMART:SM00119 SMART:SM00239 SMART:SM00456
UniPathway:UPA00143 ZFIN:ZDB-GENE-040426-2744 GO:GO:0005634
GO:GO:0005737 InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
GO:GO:0007179 GO:GO:0004842 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0042787 SUPFAM:SSF56204 HOVERGEN:HBG004134 eggNOG:COG5021
HOGENOM:HOG000208451 KO:K04678 CTD:57154 OrthoDB:EOG47PX58
EMBL:BC059201 IPI:IPI00508764 RefSeq:NP_001001943.1
UniGene:Dr.76814 ProteinModelPortal:Q6PCR3 SMR:Q6PCR3 STRING:Q6PCR3
GeneID:321695 KEGG:dre:321695 InParanoid:Q6PCR3 NextBio:20807489
ArrayExpress:Q6PCR3 Uniprot:Q6PCR3
Length = 731
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 372 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 419
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 420 EWLYLLCHEMLNPYYGLFQ 438
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 108 (43.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 31/99 (31%), Positives = 44/99 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H++A G VF WG GL S ++ Q++P + G
Sbjct: 47 GLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL----FFTAKEPSRVTGLE 96
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
+ + G HS +L D GEV+ WG + HGQL E+A
Sbjct: 97 NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAA 135
Score = 91 (37.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L + G+V + G ++ GQLG+ ++ +P+ ++ L VV AG H + T++ G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATAS-G 58
Query: 70 L---WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
+ W + L CG G T L L K+ P RV GL + + AG H
Sbjct: 59 IVFQWGT-GLASCGRRLC-PGQT---LPLFFTAKE----PSRVTGLENSKAMCVLAGSDH 109
Query: 127 CLVLTSSGVV 136
LT +G V
Sbjct: 110 SASLTDAGEV 119
Score = 66 (28.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 167 SLNSPGELYTWGNNEYGQM 185
SL GE+Y WG+N++GQ+
Sbjct: 112 SLTDAGEVYVWGSNKHGQL 130
>UNIPROTKB|F1PQT6 [details] [associations]
symbol:SMURF1 "E3 ubiquitin-protein ligase" species:9615
"Canis lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070411 "I-SMAD binding" evidence=IEA] [GO:0048185 "activin
binding" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034394 "protein localization to cell
surface" evidence=IEA] [GO:0032801 "receptor catabolic process"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0030509 "BMP signaling pathway"
evidence=IEA] [GO:0030279 "negative regulation of ossification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0006611 "protein export from nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005737
GO:GO:0030154 GO:GO:0043161 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 GO:GO:0030509 GO:GO:0031398 GO:GO:0030279
GO:GO:0004842 GO:GO:0000209 GO:GO:0034394 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0006611 GO:GO:0042787 GO:GO:0030512
GO:GO:0032801 GO:GO:0030579 SUPFAM:SSF56204
GeneTree:ENSGT00670000098006 OMA:VSCEELG EMBL:AAEX03004280
Ensembl:ENSCAFT00000024051 Uniprot:F1PQT6
Length = 754
Score = 137 (53.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 395 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 442
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 443 EWLYLLCHEMLNPYYGLFQ 461
>UNIPROTKB|Q9HCE7 [details] [associations]
symbol:SMURF1 "E3 ubiquitin-protein ligase SMURF1"
species:9606 "Homo sapiens" [GO:0030279 "negative regulation of
ossification" evidence=IEA] [GO:0033267 "axon part" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0007398 "ectoderm development" evidence=TAS]
[GO:0030154 "cell differentiation" evidence=IDA] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030509 "BMP signaling pathway" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007179 "transforming growth factor beta receptor
signaling pathway" evidence=TAS] [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IDA;TAS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IDA] [GO:0070411 "I-SMAD binding"
evidence=IPI] [GO:0048185 "activin binding" evidence=IPI]
[GO:0006611 "protein export from nucleus" evidence=IDA] [GO:0070412
"R-SMAD binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0030579 "ubiquitin-dependent SMAD protein
catabolic process" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0034394 "protein localization to cell surface" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0032801 "receptor
catabolic process" evidence=IDA] Pfam:PF00632 InterPro:IPR000008
InterPro:IPR000569 InterPro:IPR001202 InterPro:IPR008973
InterPro:IPR024928 Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119
SMART:SM00239 SMART:SM00456 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005886 Reactome:REACT_111102 Reactome:REACT_6900
Pathway_Interaction_DB:tgfbrpathway GO:GO:0033267 GO:GO:0005654
GO:GO:0030154 GO:GO:0043161 GO:GO:0043025 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 EMBL:CH236956 EMBL:CH471091
GO:GO:0030509 GO:GO:0007179 GO:GO:0031398 GO:GO:0030279
GO:GO:0004842 GO:GO:0007398 GO:GO:0000209 GO:GO:0034394
Pathway_Interaction_DB:hdac_classi_pathway Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0006611 GO:GO:0042787 GO:GO:0030512
Pathway_Interaction_DB:bmppathway GO:GO:0030514 GO:GO:0032801
GO:GO:0030579 SUPFAM:SSF56204 HOVERGEN:HBG004134 eggNOG:COG5021
HOGENOM:HOG000208451 PDB:2LAZ PDB:2LB0 PDB:2LB1 PDBsum:2LAZ
PDBsum:2LB0 PDBsum:2LB1 PDB:2LTX PDBsum:2LTX KO:K04678
EMBL:AB046845 EMBL:AC004893 EMBL:AF464850 EMBL:AC073468
EMBL:AC114500 EMBL:BC136804 EMBL:BC144414 EMBL:BC152468
EMBL:AF199364 IPI:IPI00217054 IPI:IPI00219332 RefSeq:NP_001186776.1
RefSeq:NP_065162.1 RefSeq:NP_851994.1 UniGene:Hs.189329 PDB:3PYC
PDBsum:3PYC ProteinModelPortal:Q9HCE7 SMR:Q9HCE7 DIP:DIP-36709N
IntAct:Q9HCE7 MINT:MINT-102628 STRING:Q9HCE7 PhosphoSite:Q9HCE7
DMDM:17865625 PaxDb:Q9HCE7 PRIDE:Q9HCE7 Ensembl:ENST00000361125
Ensembl:ENST00000361368 GeneID:57154 KEGG:hsa:57154 UCSC:uc003upu.2
UCSC:uc003upv.2 CTD:57154 GeneCards:GC07M098627 HGNC:HGNC:16807
HPA:CAB013009 MIM:605568 neXtProt:NX_Q9HCE7 PharmGKB:PA134987175
InParanoid:Q9HCE7 OMA:VSCEELG OrthoDB:EOG47PX58 PhylomeDB:Q9HCE7
ChiTaRS:SMURF1 EvolutionaryTrace:Q9HCE7 GenomeRNAi:57154
NextBio:63133 ArrayExpress:Q9HCE7 Bgee:Q9HCE7 CleanEx:HS_SMURF1
Genevestigator:Q9HCE7 GermOnline:ENSG00000198742 Uniprot:Q9HCE7
Length = 757
Score = 137 (53.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 398 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 445
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 446 EWLYLLCHEMLNPYYGLFQ 464
>UNIPROTKB|F1MLS5 [details] [associations]
symbol:Bt.110349 "E3 ubiquitin-protein ligase" species:9913
"Bos taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070411
"I-SMAD binding" evidence=IEA] [GO:0048185 "activin binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034394 "protein localization to cell
surface" evidence=IEA] [GO:0032801 "receptor catabolic process"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0030509 "BMP signaling pathway"
evidence=IEA] [GO:0030279 "negative regulation of ossification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0006611 "protein export from nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005737
GO:GO:0030154 GO:GO:0043161 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 GO:GO:0030509 GO:GO:0031398 GO:GO:0030279
GO:GO:0004842 GO:GO:0000209 GO:GO:0034394 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0006611 GO:GO:0042787 GO:GO:0030512
GO:GO:0032801 GO:GO:0030579 SUPFAM:SSF56204
GeneTree:ENSGT00670000098006 OMA:VSCEELG EMBL:DAAA02058311
IPI:IPI00701920 Ensembl:ENSBTAT00000043725 Uniprot:F1MLS5
Length = 770
Score = 137 (53.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 414 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 461
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 462 EWLYLLCHEMLNPYYGLFQ 480
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 134 (52.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 70/257 (27%), Positives = 106/257 (41%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS--VVQACAGYSH 60
G HSL L D VF+ G +++GQ G + + + S RV + VVQ G H
Sbjct: 182 GRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDH 241
Query: 61 CLVLTSTTGLWHSLALNDCGEVFT--WGGDTHGQLGLESADKKSQSIPKRVKG-LASVSV 117
L LT D GEV++ WG D GQ GL + S P ++ G LA V+V
Sbjct: 242 SLFLT------------DKGEVYSCGWGAD--GQTGLGHYNITSS--PTKLGGDLAGVNV 285
Query: 118 VQACAGYSHCLVLTSS--GVVTCTHKENGCGSDPSQGVQSNLVQDSH------------- 162
+Q A Y C + S+ G+ + E + + Q N+ + H
Sbjct: 286 IQV-ATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACG 344
Query: 163 -TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK--PQRVESLVN----LPIALIACGA 215
T LN G ++ WG G+ G N + V + P + L + ++ I CG
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGK-GPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGL 403
Query: 216 NHSFVLSKSVSRLYAFG 232
+H L+ L+ +G
Sbjct: 404 SHFAALTNK-GELFVWG 419
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 132 (51.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G H +A + G+VFTWG +GQLG +A + + K L +A +H
Sbjct: 254 SGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHT 313
Query: 62 LVLTSTT-GLWHSLAL-NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
++L G H+LA+ DC +WG + HG G + + +PK VK L +
Sbjct: 314 ILLFQIACGSEHNLAVVGDC--CLSWGWNEHGMCG--DGTEANVHVPKPVKALGYAKQIL 369
Query: 120 ACAGYSHCLVL 130
G H L L
Sbjct: 370 IGCGAGHSLAL 380
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 139 (54.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 54/233 (23%), Positives = 101/233 (43%)
Query: 4 LWHSLALNDCGEVFTWGGDTHGQLGLESADK---KSQSIPKRVKGLASVSVVQACAGYSH 60
+W L+ + + T G +GQLG + ++ K S+ + + + AG +
Sbjct: 180 VW--LSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETI 237
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
V T H++A++ G V+TWG +G+LG ++K + P+R+ +V+
Sbjct: 238 VKVACGTN---HTVAVDKNGYVYTWGFGGYGRLG--HREQKDEWAPRRIDVFQRNNVLPP 292
Query: 121 ----CAGYSHCLVLTSSGVVTCTHKENGCGSD-----PSQGVQS-NLV-QDSHTTITSLN 169
AG ++ G + K G D P + NL DS + +
Sbjct: 293 NAILSAGSANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVG 352
Query: 170 SPGELYTWGNNEYGQMGIN-NSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
+ +WG+ +YG++G N + P++V+ L + + +ACG HS V+
Sbjct: 353 ADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVI 405
Score = 111 (44.1 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 32/94 (34%), Positives = 49/94 (52%)
Query: 5 WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
+H +AL+ G +TWG + GQLG D + P V GL+ +V+A AG +H +V+
Sbjct: 68 FHCVALDVEGRCYTWGRNEKGQLG--HGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVV 125
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
+ D G+ +G + +GQLGL SA
Sbjct: 126 S------------DDGQSLGFGWNKYGQLGLGSA 147
Score = 105 (42.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 46 LASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI 105
L S + ++ G + V T +H +AL+ G +TWG + GQLG D +
Sbjct: 44 LVSPTRLRPLVGVNIRFVATGCAS-FHCVALDVEGRCYTWGRNEKGQLG--HGDMIQRDR 100
Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSG 134
P V GL+ +V+A AG +H +V++ G
Sbjct: 101 PTVVSGLSKHKIVKAAAGRNHTVVVSDDG 129
Score = 77 (32.2 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 145 CGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM--GINNSNTTVTKPQRVES 202
CG+D + + S + + L G+L +NE+ + + +P+ + S
Sbjct: 174 CGADFTVWLSST--EGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIAS 231
Query: 203 LVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
L I +ACG NH+ + K+ +Y +G G
Sbjct: 232 LAGETIVKVACGTNHTVAVDKN-GYVYTWGFG 262
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 884 GGRTVSNIRTPAPHGGRK 901
GGRT + P GGR+
Sbjct: 515 GGRTSNGKAPPVKTGGRR 532
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 130 (50.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSVVQACAGY 58
+ G HS +L D GE++ WG + HGQL ++A +P++++ + V +G+
Sbjct: 219 LAGSGHSASLTDAGELYVWGSNKHGQLASQAA---FLPLPQKIEAHRFQNEKVAAVWSGW 275
Query: 59 SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG--LESAD-----KKSQSIP 106
+H + T T G+VFTWG +GQLG LES + K++ S+P
Sbjct: 276 THLVAQTET------------GKVFTWGRADYGQLGRTLESPEGWKPKKQASSLP 318
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 38/139 (27%), Positives = 65/139 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H+LA G VF WG GL S+ ++ Q++P L + + G
Sbjct: 161 GLRHALAATASGLVFQWG------TGLASSGRRLCPGQTLPLF---LTAKEPSKVTVGLE 211
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + G HS +L D GE++ WG + HGQL ++A +P++++ + V
Sbjct: 212 NSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQAA---FLPLPQKIEAHRFQNEKV 268
Query: 118 VQACAGYSHCLVLTSSGVV 136
+G++H + T +G V
Sbjct: 269 AAVWSGWTHLVAQTETGKV 287
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 64/253 (25%), Positives = 100/253 (39%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
HS + D G +F G + GQLGL + D ++ K L + Q G+ ++L
Sbjct: 60 HSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFTL---CKSLLGCPIQQVACGWDFTIIL 116
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGL---ESADKKSQSIPKRVKGLASVSVVQAC 121
T G S N G++ G HG ++ + + + + GL A
Sbjct: 117 TKN-GQVLSCGSNSFGQL----GVPHGPRRCVVPQAIEVQREKVVSIAAGLRHALAATAS 171
Query: 122 A-GYSHCLVLTSSGVVTC---------THKENG---CGSDPSQGVQSNLVQDSHTTITSL 168
+ L SSG C T KE G + SQ V L H+ SL
Sbjct: 172 GLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAV-CVLAGSGHSA--SL 228
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGANHSFVLSKSVS 226
GELY WG+N++GQ+ + + PQ++E+ N +A + G H V
Sbjct: 229 TDAGELYVWGSNKHGQLA--SQAAFLPLPQKIEAHRFQNEKVAAVWSGWTH-LVAQTETG 285
Query: 227 RLYAFGIGSAVQL 239
+++ +G QL
Sbjct: 286 KVFTWGRADYGQL 298
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
+ G HS +L D GEV+ WG + HGQL E+A +P++++ C + +
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEA--------HC--FQN 264
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
V +G H +A + G++FTWG +GQLG + + + K+ L +
Sbjct: 265 EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNS 324
Query: 121 CAGYSHCL 128
HCL
Sbjct: 325 MPSSPHCL 332
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 51/201 (25%), Positives = 91/201 (45%)
Query: 5 WH-SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
W ++ L + G+V + G ++ GQLG+ ++ +P+ ++ L VV AG H +
Sbjct: 110 WDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVA 167
Query: 64 LTSTTGL---WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
T++ G+ W + L CG G T L L K+ P RV GL + +
Sbjct: 168 ATAS-GIVFQWGT-GLASCGRRLC-PGQT---LPLFFTAKE----PSRVTGLENSKAMCV 217
Query: 121 CAGYSHCLVLTSSGVVTC--THKENGCGSDPS-----QGVQSNLVQDSHTT--------I 165
AG H LT +G V ++K ++ + Q ++++ Q+ T +
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHL 277
Query: 166 TSLNSPGELYTWGNNEYGQMG 186
+ G+++TWG +YGQ+G
Sbjct: 278 VAQTETGKMFTWGRADYGQLG 298
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 62/247 (25%), Positives = 99/247 (40%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + D G++F G + GQLGL + P K L + Q G+ ++LT
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLT 117
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQL--GLESADKK----SQSIPKRVKGLASVSVVQ 119
G S N G++ G + +E +K + + V AS V Q
Sbjct: 118 EN-GQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQ 176
Query: 120 ACAGYSHC---LVLTSSGVVTCTHKENG--CGSDPSQGVQSNLVQDSHTTITSLNSPGEL 174
G + C L + + T KE G + S+ + L H+ SL GE+
Sbjct: 177 WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAM-CVLAGSDHSA--SLTDAGEV 233
Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGANHSFVLSKSVSRLYAFG 232
Y WG+N++GQ+ N + PQ++E+ N + I G H V +++ +G
Sbjct: 234 YVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH-LVAQTETGKMFTWG 290
Query: 233 IGSAVQL 239
QL
Sbjct: 291 RADYGQL 297
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKK---SQSIPKRVKGLASVSVVQACAGYS 59
GL H++A G VF WG GL S ++ Q++P + G
Sbjct: 161 GLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL----FFTAKEPSRVTGLE 210
Query: 60 HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSV 117
+ + G HS +L D GEV+ WG + HGQL E+A +P++++ + V
Sbjct: 211 NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEAHCFQNEKV 267
Query: 118 VQACAGYSHCLVLTSSG 134
+G++H + T +G
Sbjct: 268 TAIWSGWTHLVAQTETG 284
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 144 (55.7 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 59/194 (30%), Positives = 94/194 (48%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLG----LESADK--KSQSIP-KRVKGLASVSVVQAC 121
G HSLAL + GE++ WG + H QL + S DK K Q IP +RVK S+S C
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVK---SIS----C 94
Query: 122 AG-YSHCLVLTSSGVVTCTHKENG-CGSDPSQ-----GVQSNLVQDSHTTIT--SLNSPG 172
G +S ++ V T E G C P++ GV + +H + S +P
Sbjct: 95 GGNFSAAIMENGLLYVWGTLIEGGKCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTPE 154
Query: 173 E--LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
+ +YTWG N GQ+G+ + T P+RV +L + I+ + CG + + + + ++
Sbjct: 155 KRSVYTWGTNRKGQLGVVGDSIT-NAPRRV-TLGSKAIS-VCCGEEFTAAIVEG-NEVFV 210
Query: 231 FGIGSAVQLDSPKS 244
+G + Q+ S S
Sbjct: 211 WGYNKSRQICSNNS 224
Score = 53 (23.7 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 959 RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL 1004
+ Q ++AM + N + F P+ L + E+ D IVED IR L
Sbjct: 544 KYQKQNAMGEKNLAI---VFAPNILTRG---EIGNDEIVEDMIRLL 583
Score = 39 (18.8 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 823 DYFERLILIFKQCLIYLL 840
++ E+L L +Q LIYLL
Sbjct: 515 EWIEKLPLENRQLLIYLL 532
Score = 39 (18.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 9/32 (28%), Positives = 21/32 (65%)
Query: 320 ERLKECEREVEQLKSDETLDQDLLLYLETVFL 351
E+L ++E ++L++++T + L +L +V L
Sbjct: 1007 EKLFRAKKEFDKLETEKTKLEKQLNHLNSVTL 1038
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 133 (51.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 52/250 (20%), Positives = 108/250 (43%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H LAL+ GE+F WG G+LGL + ++S + P++V + + G +
Sbjct: 457 GASHVLALSADGELFAWGRGDGGRLGLGT--RESHNCPQQVPMVPGQEAQRVVCGIDCSM 514
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQA- 120
+LTS G V G + +LGL+ + + +P ++V+ S + + +
Sbjct: 515 ILTSP------------GRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSA 562
Query: 121 --------CA--GYSHCLVLTSSGVV-TCTHKENG-------------CGSDPSQGVQSN 156
C G +H +T+SG T ++G C +G++
Sbjct: 563 PLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV 622
Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
+V ++ + GE+Y+WG G++G + + + +P +++ + ++C
Sbjct: 623 MVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHG 682
Query: 217 HSFVLSKSVS 226
++ + +SV+
Sbjct: 683 NTLLAVRSVT 692
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 10 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
L D G + T+G ++G LG S SQ P V+ L +VQ G SH L L++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGSLTDISQ--PTIVEALLGYEMVQVACGASHVLALSAD-- 467
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
GE+F WG G+LGL + ++S + P++V + + G ++
Sbjct: 468 ----------GELFAWGRGDGGRLGLGT--RESHNCPQQVPMVPGQEAQRVVCGIDCSMI 515
Query: 130 LTSSG-VVTC-THKENGCGSD 148
LTS G V+ C +++ N G D
Sbjct: 516 LTSPGRVLACGSNRFNKLGLD 536
>UNIPROTKB|Q870N1 [details] [associations]
symbol:49D12.220 "Related to ubiquitin-protein ligase"
species:5141 "Neurospora crassa" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
OrthoDB:EOG4W3WW2 EMBL:BX295540 HSSP:Q05086
ProteinModelPortal:Q870N1 Uniprot:Q870N1
Length = 1466
Score = 150 (57.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 53/209 (25%), Positives = 94/209 (44%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRD--FLCNYPFIFDAKA-----KTTLL 954
V + + Y D V + + W++ + STR L ++P++FD+ ++ L
Sbjct: 803 VQFHSKYFADRLDVVEAPVG---WLA---HASTRKKLHLLDFPYLFDSNTLVGFFRSINL 856
Query: 955 EMDQRIQMEHAMNQTNFYLFL---QTFNPH-----------TLNQYLEVEVSRDNIVEDT 1000
R + A Q F +++ N H ++YL +E+ R+ ++ D
Sbjct: 857 SRMNRYYEQSASIQERFEVYMGRSSPMNEHHKRVIMDKLKVASSKYLVLEIRRNRVIRDA 916
Query: 1001 IRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKY 1060
+L + + +PLK I+L + GEE D+GGV++EF L + E L+P Y
Sbjct: 917 FDQLWRREAREIMRPLK------IHLGERA---GEEGFDSGGVQQEFFRLAMAEALNPDY 967
Query: 1061 GMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
G F E T+ WF + ++ + LIG
Sbjct: 968 GAFTVDERTKMTWFQPGSVVEEWKFELIG 996
Score = 140 (54.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 37/100 (37%), Positives = 52/100 (52%)
Query: 720 YG-ITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG T E T+ WF + ++ LIG L LA+YN + + FP ALY K+L EP+
Sbjct: 967 YGAFTVDERTKMTWFQPGSVVEEWKFELIGLLMSLAVYNGLTLPVTFPKALYAKLLGEPV 1026
Query: 779 L-LQDLKDLSPTLAKSLQDILDYREPDL----EDVFGITF 813
L + D P L L +LD+ E ++ EDVF T+
Sbjct: 1027 TDLDHIADGWPDLVSGLTMLLDWDEKEMGGSVEDVFARTY 1066
Score = 40 (19.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 156 NLVQDSHTTITSLNSPGELY 175
+++ D H I S + G+LY
Sbjct: 542 HVLSDPHQAIRSFTTNGQLY 561
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 775 DEPILLQDLKDLSPTLAKSLQDIL 798
D+ IL Q L L P + L D++
Sbjct: 461 DDHILPQTLSRLDPRVVDFLCDVI 484
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 97 (39.2 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
+ ++ S G++Y WGN GQ+G +T+P+++E V +A ACG + ++ +
Sbjct: 182 VVAVLSNGDVYGWGNGRKGQLGAPEG--IITEPRKIEG-VPFKVAKAACGKEFTCLVGEP 238
Query: 225 VSR-LYAFGIGS-AVQLDSPKSV 245
S + G+ +VQ +P SV
Sbjct: 239 GSGDILVMGLDKWSVQSSAPNSV 261
Score = 80 (33.2 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 17 FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLAL 76
F G + GQLG+ K+ S+PK L S + + A + +V + G H+L L
Sbjct: 5 FALGSNGSGQLGI--GHKEDISVPK--PALFSSAAGELSANPTSPVVQVAAGGN-HTLLL 59
Query: 77 NDCGEVFTWGGDTHGQLGLESADKKS 102
GE+++ G G GL+SA S
Sbjct: 60 TQDGEIYSSGDPASGACGLKSATADS 85
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 126 (49.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/168 (29%), Positives = 77/168 (45%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 83 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTA 140
Query: 63 VLTST--TGLWHSL--ALNDCGEVFTWG------G--------DTHGQLGLESADKKSQS 104
LT LW S L + WG G D +G +GL KKS
Sbjct: 141 ALTDDGRVFLWGSFRHCLFHTSQRLGWGKEVWRQGLSHLRVSKDNNGVIGLLEPMKKSM- 199
Query: 105 IPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG 152
+P +V+ V VV+ +G H ++LT+ G + GCG G
Sbjct: 200 VPVQVQ--LDVPVVKVASGNDHLVMLTADGDLYTL----GCGEQGQLG 241
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 67/234 (28%), Positives = 105/234 (44%)
Query: 14 GEVFTWG-GDTHGQLGLESADKKSQSIPKRVK-GLASV--SVVQACAGYSHCLVLTSTTG 69
G V T G GD GQLGL +++ +R K L S+ VVQA AG G
Sbjct: 43 GLVLTLGQGDV-GQLGL------GENVMERKKPALVSIPEDVVQAEAG-----------G 84
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
+ H++ L+ G+V+++G + G LG +++ + S+ +P +V+ VVQ AG SH
Sbjct: 85 M-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHTAA 141
Query: 130 LTSSGVVTCTHKENGCGSDPSQ--GVQSNLVQD--SHTTITSLNSPGELYTWGNNEYGQM 185
LT G V C SQ G + + SH ++ NN G +
Sbjct: 142 LTDDGRVFLWGSFRHCLFHTSQRLGWGKEVWRQGLSHLRVSK----------DNN--GVI 189
Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
G+ P +V+ +++P+ +A G +H +L+ LY G G QL
Sbjct: 190 GLLEPMKKSMVPVQVQ--LDVPVVKVASGNDHLVMLTAD-GDLYTLGCGEQGQL 240
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 136 (52.9 bits), Expect = 0.00010, P = 0.00010
Identities = 48/157 (30%), Positives = 70/157 (44%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHC 61
G H L L+ G++ WGG+ GQ G+ + + + +V G ++ + AC G H
Sbjct: 784 GAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANL--HQVDGDWPAIEKI-AC-GQFHS 839
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+ S LW F WG GQLG + +Q +P RV GL V Q
Sbjct: 840 AFICSDGSLW----------TFGWG--VWGQLGHGGRNNSNQLVPTRVNGLIC-KVTQIA 886
Query: 122 AGYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSNL 157
G +H +VLT +G V+ C G GS GV ++
Sbjct: 887 CGRAHTVVLTDTGRVLVC-----GSGSYGQMGVDDDI 918
Score = 133 (51.9 bits), Expect = 0.00021, P = 0.00021
Identities = 68/283 (24%), Positives = 112/283 (39%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HS + G ++T+G GQLG + +Q +P RV GL V Q G +H +
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLIC-KVTQIACGRAHTV 893
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
VLT T G V G ++GQ+G++ KK + G + V
Sbjct: 894 VLTDT------------GRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLG--PLRVRDIAT 939
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDS--HTTITSLNSPGELYTWGNN 180
Y H + +T V E G +P + V + + P N
Sbjct: 940 HYYHSICITEDNRVF----E--WGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNG 993
Query: 181 EYGQMGINNSNTTVTKP---QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
++ +N + + V+ ++ I +ACG +HS +++ S LY +G G
Sbjct: 994 STPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALIT-SEGTLYTWGKGLDY 1052
Query: 238 QLD-SPKSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLV 278
QL K+ P + P A V ++ G + ++ S G V
Sbjct: 1053 QLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSV 1095
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 107 (42.7 bits), Expect = 0.00010, P = 0.00010
Identities = 33/104 (31%), Positives = 53/104 (50%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSVVQACAGY 58
+ G HS +L D GEV+ WG + HGQL E+A +P++++ + V +G+
Sbjct: 34 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIEAHCFQNEKVTAIWSGW 90
Query: 59 SHCLVLTSTTGLWHSLALNDCGEVFT--WGGDTHGQLGLESADK 100
+H LV + T L HS CG+ F W + L ++SA +
Sbjct: 91 TH-LVAQTDTEL-HS---GRCGDEFLELWSQEA---LQVDSASR 126
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 56/229 (24%), Positives = 98/229 (42%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H LA+ + EVF+WG +G+LGL + D S + P++V A + G C
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQD--SHNCPQQVSLPADFEAQRVLCGVD-CS 514
Query: 63 VLTST--------TGLWHSLALNDCGEV-----FTWGGDTH-GQLGLESADKKSQSIPKR 108
++ ST ++ L L+ F + H QL ++SA ++ I
Sbjct: 515 MIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQL-VQSAPLNTEKIVYI 573
Query: 109 VKGLA-SVSVVQACAGYSHCLVLTSS--GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI 165
G A SV+V + C S+ G + C+H+ + G+Q +
Sbjct: 574 DIGTAHSVAVTEK----GQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITMAACGDAF 629
Query: 166 T-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIAC 213
T ++ + GE+YTWG G++G + + KP +++ + +AC
Sbjct: 630 TLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVAC 678
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 127 (49.8 bits), Expect = 0.00028, P = 0.00028
Identities = 60/249 (24%), Positives = 103/249 (41%)
Query: 6 HSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
HS L + G VF WG D+HG +GL K I ++G S+ +G H ++
Sbjct: 137 HSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDL-MEGTVCCSIA---SGADHLVI 192
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDT---HGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
LT T G ++ + G++ + G+ G + +Q I R K ++
Sbjct: 193 LT-TAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNY 251
Query: 121 CAGY--SHCLVLTSSGVVT---CTHKENG--CGSDPSQGVQSNL---VQDSHTTITSLNS 170
C S V+ ++G+ H+ G P + ++ H T+ L +
Sbjct: 252 CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVI-LTT 310
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
+ G EYG++G+ + V KP V+ L I + CG S+ ++ +LY+
Sbjct: 311 DLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTID-GKLYS 368
Query: 231 FGIGSAVQL 239
+G G QL
Sbjct: 369 WGSGVNNQL 377
Score = 122 (48.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 41/145 (28%), Positives = 68/145 (46%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L G+++++G + G LG ++++ S+S P + G + C+
Sbjct: 82 GGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID----------LPGKALCI 131
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
+ G HS L + G VF WG D+HG +GL K I ++G S+
Sbjct: 132 ----SAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDL-MEGTVCCSIA-- 184
Query: 121 CAGYSHCLVLTSSG-VVTCTHKENG 144
+G H ++LT++G V T E G
Sbjct: 185 -SGADHLVILTTAGKVFTVGCAEQG 208
Score = 54 (24.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN-HSFVLSKS 224
G+LY+WG+ Q+G+ + + + V L+A G H+ L K+
Sbjct: 364 GKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKA 417
>UNIPROTKB|J3QQM4 [details] [associations]
symbol:SMURF2 "E3 ubiquitin-protein ligase SMURF2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 Pfam:PF00168 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119
SMART:SM00239 SMART:SM00456 GO:GO:0016567 GO:GO:0005622
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0004842
Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AC009994 SUPFAM:SSF56204
EMBL:AC132812 HGNC:HGNC:16809 ChiTaRS:SMURF2
Ensembl:ENST00000585301 Uniprot:J3QQM4
Length = 561
Score = 126 (49.4 bits), Expect = 0.00038, P = 0.00038
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D K L +KFRGEE D GGV R
Sbjct: 379 HCRIEVSREEIFEESYRQVMKMRPKDLWKRL------------MIKFRGEEGLDYGGVAR 426
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 427 EWLYLLSHEMLNPYYGLFQ 445
>ZFIN|ZDB-GENE-030131-1830 [details] [associations]
symbol:smurf2 "SMAD specific E3 ubiquitin protein
ligase 2" species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 UniPathway:UPA00143 ZFIN:ZDB-GENE-030131-1830
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0045121
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0004842
Gene3D:2.20.70.10 SUPFAM:SSF51045 SUPFAM:SSF56204
HOVERGEN:HBG004134 eggNOG:COG5021 HOGENOM:HOG000208451
GeneTree:ENSGT00670000098006 KO:K04678 OrthoDB:EOG47PX58
EMBL:BC155849 IPI:IPI00773931 RefSeq:NP_001107898.1
UniGene:Dr.77630 ProteinModelPortal:A9JRZ0 SMR:A9JRZ0 STRING:A9JRZ0
Ensembl:ENSDART00000055491 GeneID:563633 KEGG:dre:563633 CTD:64750
OMA:NKKEYVX NextBio:20884992 Bgee:A9JRZ0 Uniprot:A9JRZ0
Length = 765
Score = 127 (49.8 bits), Expect = 0.00045, P = 0.00045
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D K L VKFRGEE D GGV R
Sbjct: 409 HCRIEVSREEIFEESYRQVMKMRPKDLWKRL------------MVKFRGEEGLDYGGVAR 456
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 457 EWLYLLSHEMLNPYYGLFQ 475
>UNIPROTKB|Q9PUN2 [details] [associations]
symbol:smurf1 "E3 ubiquitin-protein ligase SMURF1"
species:8355 "Xenopus laevis" [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS;IDA] [GO:0005622 "intracellular"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006464
"cellular protein modification process" evidence=TAS] [GO:0007398
"ectoderm development" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030509 "BMP signaling pathway"
evidence=ISS] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=TAS] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=ISS]
Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005737
GO:GO:0030154 InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
GO:GO:0030509 GO:GO:0004842 GO:GO:0007398 GO:GO:0000209
Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0042787 GO:GO:0030514
SUPFAM:SSF56204 HOVERGEN:HBG004134 KO:K04678 CTD:57154
EMBL:AF169310 EMBL:BC073111 RefSeq:NP_001081939.1 UniGene:Xl.539
ProteinModelPortal:Q9PUN2 SMR:Q9PUN2 GeneID:398131 KEGG:xla:398131
Xenbase:XB-GENE-479050 Uniprot:Q9PUN2
Length = 731
Score = 138 (53.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ VEVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 372 HCRVEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 419
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 420 EWLYLLCHEMLNPYYGLFQ 438
Score = 38 (18.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 509 YHEFMNPRQHEILHMPFAGALPAFWIV 535
+H+ PR ++ G+LPA W V
Sbjct: 261 WHDPRIPRDLNSVNCDDLGSLPAGWEV 287
>UNIPROTKB|F1N3W8 [details] [associations]
symbol:SMURF2 "E3 ubiquitin-protein ligase" species:9913
"Bos taurus" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] Pfam:PF00632
InterPro:IPR000008 InterPro:IPR000569 InterPro:IPR001202
InterPro:IPR008973 InterPro:IPR024928 Pfam:PF00168 Pfam:PF00397
PIRSF:PIRSF001569 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237
SMART:SM00119 SMART:SM00239 SMART:SM00456 UniPathway:UPA00143
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0004842
Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0000151 GO:GO:0030579
SUPFAM:SSF56204 GeneTree:ENSGT00670000098006 OMA:ANQAARP
EMBL:DAAA02049347 IPI:IPI00999726 Ensembl:ENSBTAT00000026451
Uniprot:F1N3W8
Length = 730
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D K L +KFRGEE D GGV R
Sbjct: 374 HCRIEVSREEIFEESYRQVMKMRPKDLWKRL------------MIKFRGEEGLDYGGVAR 421
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 422 EWLYLLSHEMLNPYYGLFQ 440
>RGD|1310067 [details] [associations]
symbol:Smurf2 "SMAD specific E3 ubiquitin protein ligase 2"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IBA] [GO:0005160 "transforming growth factor
beta receptor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007179 "transforming growth factor beta receptor signaling
pathway" evidence=IBA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA;ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=ISO;IPI]
Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 UniPathway:UPA00143 RGD:1310067 GO:GO:0005634
GO:GO:0005737 InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
GO:GO:0007179 GO:GO:0004842 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00670000098006
OMA:ANQAARP IPI:IPI00767784 Ensembl:ENSRNOT00000019781
ArrayExpress:F1M3F2 Uniprot:F1M3F2
Length = 732
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D K L +KFRGEE D GGV R
Sbjct: 376 HCRIEVSREEIFEESYRQVMKMRPKDLWKRL------------MIKFRGEEGLDYGGVAR 423
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 424 EWLYLLSHEMLNPYYGLFQ 442
>UNIPROTKB|F1LX00 [details] [associations]
symbol:Smurf2 "E3 ubiquitin-protein ligase" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 UniPathway:UPA00143 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0004842 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0000151 GO:GO:0030579 SUPFAM:SSF56204
IPI:IPI00949494 Ensembl:ENSRNOT00000068072 ArrayExpress:F1LX00
Uniprot:F1LX00
Length = 732
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D K L +KFRGEE D GGV R
Sbjct: 376 HCRIEVSREEIFEESYRQVMKMRPKDLWKRL------------MIKFRGEEGLDYGGVAR 423
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 424 EWLYLLSHEMLNPYYGLFQ 442
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 130 (50.8 bits), Expect = 0.00054, P = 0.00054
Identities = 57/212 (26%), Positives = 98/212 (46%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
H+LA+ + G++F+WG + GQLG L A+ K +P +S Q + ++
Sbjct: 490 HTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDD-VP------VQLSPRQIFNPFKKEVI 542
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS---QSIPKRV-KGLASVSVVQ 119
L + HS+ + G ++T+G + GQLGL +D +S Q+ P+RV L S +
Sbjct: 543 LGAAASAVHSVVYSTSG-LYTFGKN-EGQLGLVDSDARSLEVQTTPRRVGASLFSTPIQS 600
Query: 120 ACA-GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI---TSLNSPGELY 175
A + ++L + V H S P + + S ++DS TS+N ++
Sbjct: 601 VSATDQATAILLQNHEVWVFAHYGYSRLSFPLE-INSRFIRDSFMATRYDTSINRIVKIR 659
Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLP 207
+ GN +++S T +V L NLP
Sbjct: 660 SGGNTI---CALSSSGDVFTV--QVNKLENLP 686
>UNIPROTKB|F1NJU6 [details] [associations]
symbol:SMURF2 "E3 ubiquitin-protein ligase" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD protein
catabolic process" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 UniPathway:UPA00143 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0004842 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0000151 GO:GO:0030579 SUPFAM:SSF56204
GeneTree:ENSGT00670000098006 OMA:ANQAARP EMBL:AADN02030017
IPI:IPI00603491 Ensembl:ENSGALT00000005647 Uniprot:F1NJU6
Length = 737
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D K L +KFRGEE D GGV R
Sbjct: 381 HCRIEVSREEIFEESYRQVMKMRPKDLWKRL------------MIKFRGEEGLDYGGVAR 428
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 429 EWLYLLSHEMLNPYYGLFQ 447
>UNIPROTKB|Q9HAU4 [details] [associations]
symbol:SMURF2 "E3 ubiquitin-protein ligase SMURF2"
species:9606 "Homo sapiens" [GO:0005160 "transforming growth factor
beta receptor binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=NAS] [GO:0005634
"nucleus" evidence=IBA;NAS] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0007179 "transforming growth factor beta receptor signaling
pathway" evidence=IBA;TAS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0030509 "BMP signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IDA] [GO:0046332 "SMAD
binding" evidence=IPI] Reactome:REACT_71 Pfam:PF00632
InterPro:IPR000008 InterPro:IPR000569 InterPro:IPR001202
InterPro:IPR008973 InterPro:IPR024928 Pfam:PF00168 Pfam:PF00397
PIRSF:PIRSF001569 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50237
SMART:SM00119 SMART:SM00239 SMART:SM00456 UniPathway:UPA00143
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111102
Reactome:REACT_6900 Pathway_Interaction_DB:tgfbrpathway
GO:GO:0005654 GO:GO:0045121 GO:GO:0000122 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0030509 GO:GO:0007179
GO:GO:0004842 GO:GO:0006367 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0000151 GO:GO:0042787 GO:GO:0030512
Pathway_Interaction_DB:bmppathway GO:GO:0030579 SUPFAM:SSF56204
HOVERGEN:HBG004134 eggNOG:COG5021 HOGENOM:HOG000208451 PDB:2DJY
PDB:2KXQ PDB:2LTZ PDBsum:2DJY PDBsum:2KXQ PDBsum:2LTZ KO:K04678
OMA:ANQAARP OrthoDB:EOG47PX58 CTD:64750 EMBL:AF310676 EMBL:AF301463
EMBL:AY014180 EMBL:BC093876 EMBL:BC111945 IPI:IPI00329664
RefSeq:NP_073576.1 UniGene:Hs.741194 PDB:1ZVD PDB:2JQZ PDBsum:1ZVD
PDBsum:2JQZ ProteinModelPortal:Q9HAU4 SMR:Q9HAU4 DIP:DIP-33061N
IntAct:Q9HAU4 MINT:MINT-1180022 STRING:Q9HAU4 PhosphoSite:Q9HAU4
DMDM:17865624 PaxDb:Q9HAU4 PRIDE:Q9HAU4 Ensembl:ENST00000262435
Ensembl:ENST00000573633 GeneID:64750 KEGG:hsa:64750 UCSC:uc002jep.1
GeneCards:GC17M062540 HGNC:HGNC:16809 MIM:605532 neXtProt:NX_Q9HAU4
PharmGKB:PA134985524 InParanoid:Q9HAU4 PhylomeDB:Q9HAU4
ChiTaRS:SMURF2 EvolutionaryTrace:Q9HAU4 GenomeRNAi:64750
NextBio:66708 ArrayExpress:Q9HAU4 Bgee:Q9HAU4 CleanEx:HS_SMURF2
Genevestigator:Q9HAU4 GermOnline:ENSG00000108854 Uniprot:Q9HAU4
Length = 748
Score = 126 (49.4 bits), Expect = 0.00056, P = 0.00056
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D K L +KFRGEE D GGV R
Sbjct: 392 HCRIEVSREEIFEESYRQVMKMRPKDLWKRL------------MIKFRGEEGLDYGGVAR 439
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 440 EWLYLLSHEMLNPYYGLFQ 458
>MGI|MGI:1913563 [details] [associations]
symbol:Smurf2 "SMAD specific E3 ubiquitin protein ligase 2"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005160 "transforming growth factor beta
receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007179 "transforming growth factor beta receptor signaling
pathway" evidence=IBA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=ISO]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046332 "SMAD binding"
evidence=ISO] Pfam:PF00632 InterPro:IPR000008 InterPro:IPR000569
InterPro:IPR001202 InterPro:IPR008973 InterPro:IPR024928
Pfam:PF00168 Pfam:PF00397 PIRSF:PIRSF001569 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50237 SMART:SM00119 SMART:SM00239
SMART:SM00456 UniPathway:UPA00143 MGI:MGI:1913563 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0045121 EMBL:CH466558
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0007179
GO:GO:0004842 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0000151
GO:GO:0042787 EMBL:AL593847 GO:GO:0030579 SUPFAM:SSF56204
HOVERGEN:HBG004134 eggNOG:COG5021 HOGENOM:HOG000208451
GeneTree:ENSGT00670000098006 KO:K04678 OMA:ANQAARP CTD:64750
EMBL:AY685230 EMBL:BC138786 EMBL:BC138788 IPI:IPI00346033
IPI:IPI00626426 RefSeq:NP_079757.2 UniGene:Mm.340955
ProteinModelPortal:A2A5Z6 SMR:A2A5Z6 IntAct:A2A5Z6 STRING:A2A5Z6
PhosphoSite:A2A5Z6 PaxDb:A2A5Z6 PRIDE:A2A5Z6
Ensembl:ENSMUST00000092517 Ensembl:ENSMUST00000103067
Ensembl:ENSMUST00000167787 GeneID:66313 KEGG:mmu:66313
UCSC:uc007lzx.2 UCSC:uc007lzy.2 InParanoid:Q5IRE6 NextBio:321287
Bgee:A2A5Z6 Genevestigator:A2A5Z6 Uniprot:A2A5Z6
Length = 748
Score = 126 (49.4 bits), Expect = 0.00056, P = 0.00056
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D K L +KFRGEE D GGV R
Sbjct: 392 HCRIEVSREEIFEESYRQVMKMRPKDLWKRL------------MIKFRGEEGLDYGGVAR 439
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 440 EWLYLLSHEMLNPYYGLFQ 458
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1149 1149 0.00092 123 3 11 22 0.36 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 239
No. of states in DFA: 625 (66 KB)
Total size of DFA: 552 KB (2248 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 97.13u 0.17s 97.30t Elapsed: 00:00:10
Total cpu time: 97.30u 0.17s 97.47t Elapsed: 00:00:11
Start: Thu Aug 15 15:46:10 2013 End: Thu Aug 15 15:46:21 2013
WARNINGS ISSUED: 1