Your job contains 1 sequence.
>psy16694
GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF
AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD
YALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTGVTNACGTLET
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16694
(164 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260861 - symbol:Trs23 species:7227 "Drosophila me... 601 1.5e-58 1
UNIPROTKB|F1NU38 - symbol:TRAPPC4 "Uncharacterized protei... 513 3.2e-49 1
UNIPROTKB|F1NXY8 - symbol:TRAPPC4 "Uncharacterized protei... 513 3.2e-49 1
UNIPROTKB|Q9Y296 - symbol:TRAPPC4 "Trafficking protein pa... 509 8.5e-49 1
UNIPROTKB|Q2TBL9 - symbol:TRAPPC4 "Trafficking protein pa... 506 1.8e-48 1
UNIPROTKB|E2RSA9 - symbol:TRAPPC4 "Uncharacterized protei... 506 1.8e-48 1
UNIPROTKB|F2Z5G7 - symbol:TRAPPC4 "Uncharacterized protei... 506 1.8e-48 1
MGI|MGI:1926211 - symbol:Trappc4 "trafficking protein par... 505 2.3e-48 1
RGD|1302991 - symbol:Trappc4 "trafficking protein particl... 490 8.8e-47 1
ZFIN|ZDB-GENE-040426-1734 - symbol:trappc4 "trafficking p... 475 3.4e-45 1
UNIPROTKB|E9PN70 - symbol:TRAPPC4 "Trafficking protein pa... 460 1.3e-43 1
UNIPROTKB|E9PQE8 - symbol:TRAPPC4 "Trafficking protein pa... 364 2.0e-33 1
WB|WBGene00018088 - symbol:F36D4.2 species:6239 "Caenorha... 361 4.1e-33 1
UNIPROTKB|Q20100 - symbol:F36D4.2 "Protein F36D4.2" speci... 361 4.1e-33 1
UNIPROTKB|B4DME1 - symbol:TRAPPC4 "Trafficking protein pa... 306 4.2e-30 2
TAIR|locus:2180117 - symbol:AT5G02280 "AT5G02280" species... 311 8.2e-28 1
DICTYBASE|DDB_G0280827 - symbol:trappc4 "trafficking prot... 291 1.1e-25 1
UNIPROTKB|J3KP27 - symbol:TRAPPC4 "Trafficking protein pa... 291 1.1e-25 1
POMBASE|SPBC3B9.12 - symbol:trs23 "TRAPP complex subunit ... 284 5.9e-25 1
UNIPROTKB|E9PKS9 - symbol:TRAPPC4 "Trafficking protein pa... 219 4.6e-18 1
SGD|S000002654 - symbol:TRS23 "Subunit of the transport p... 117 1.5e-16 3
CGD|CAL0000449 - symbol:orf19.3673 species:5476 "Candida ... 172 4.4e-13 1
DICTYBASE|DDB_G0273579 - symbol:DDB_G0273579 "Trafficking... 163 3.9e-12 1
DICTYBASE|DDB_G0273467 - symbol:DDB_G0273467 "Trafficking... 163 3.9e-12 1
UNIPROTKB|G3V1A0 - symbol:TRAPPC4 "Trafficking protein pa... 146 2.5e-10 1
UNIPROTKB|G5EA23 - symbol:TRAPPC4 "HCG38438, isoform CRA_... 146 2.5e-10 1
TAIR|locus:2008326 - symbol:AT1G51160 "AT1G51160" species... 129 1.6e-08 1
MGI|MGI:1098727 - symbol:Trappc1 "trafficking protein par... 126 3.3e-08 1
RGD|1311365 - symbol:Trappc1 "trafficking protein particl... 126 3.3e-08 1
UNIPROTKB|Q2KMM2 - symbol:Trappc1 "Trafficking protein pa... 126 3.3e-08 1
ZFIN|ZDB-GENE-040718-242 - symbol:trappc1 "trafficking pr... 125 4.2e-08 1
UNIPROTKB|Q17QI1 - symbol:TRAPPC1 "Trafficking protein pa... 124 5.3e-08 1
UNIPROTKB|E2RTE6 - symbol:TRAPPC1 "Uncharacterized protei... 124 5.3e-08 1
UNIPROTKB|Q9Y5R8 - symbol:TRAPPC1 "Trafficking protein pa... 124 5.3e-08 1
UNIPROTKB|F2Z5M0 - symbol:TRAPPC1 "Uncharacterized protei... 124 5.3e-08 1
ASPGD|ASPL0000070505 - symbol:AN8828 species:162425 "Emer... 123 6.8e-08 1
FB|FBgn0260860 - symbol:Bet5 species:7227 "Drosophila mel... 121 1.1e-07 1
UNIPROTKB|Q5ZKP4 - symbol:TRAPPC2 "Trafficking protein pa... 98 0.00020 1
UNIPROTKB|G4N7A5 - symbol:MGG_06435 "Transporter particle... 101 0.00030 1
ZFIN|ZDB-GENE-060929-1266 - symbol:trappc2 "trafficking p... 96 0.00044 1
UNIPROTKB|Q3T0F2 - symbol:TRAPPC2 "Trafficking protein pa... 95 0.00073 1
UNIPROTKB|F1SRI0 - symbol:TRAPPC2 "Trafficking protein pa... 95 0.00073 1
RGD|1306925 - symbol:Trappc2 "trafficking protein particl... 95 0.00073 1
>FB|FBgn0260861 [details] [associations]
symbol:Trs23 species:7227 "Drosophila melanogaster"
[GO:0030008 "TRAPP complex" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 EMBL:AE014134 GO:GO:0016192 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249 eggNOG:COG5122
GeneTree:ENSGT00510000047061 OMA:VYIVSKS EMBL:BT120293
RefSeq:NP_609247.1 UniGene:Dm.18211 SMR:Q9VLI9 STRING:Q9VLI9
EnsemblMetazoa:FBtr0079730 GeneID:34197 KEGG:dme:Dmel_CG9298
UCSC:CG9298-RA CTD:34197 FlyBase:FBgn0260861 InParanoid:Q9VLI9
OrthoDB:EOG4TQJRZ GenomeRNAi:34197 NextBio:787364 Uniprot:Q9VLI9
Length = 219
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 111/157 (70%), Positives = 131/157 (83%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GHVL AVN + LDDG DV L PE++P+ L F+RP+MTTNEKIFLASMFYPLF
Sbjct: 60 GHVLVAVNGMPVNGVTLDDGRDVRTTLDAPENYPINLKFSRPKMTTNEKIFLASMFYPLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD 120
AIASQLSPEPKSSGIE+LEADTF LHC+QTLTG+KF+I+ +T +G+DL+L+K+YELY+D
Sbjct: 120 AIASQLSPEPKSSGIEILEADTFTLHCFQTLTGIKFIIISETGLNGIDLLLRKVYELYSD 179
Query: 121 YALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTGVTN 157
Y LKNPFYSLEMPIRCELFD LQ LL Q EKTG++N
Sbjct: 180 YVLKNPFYSLEMPIRCELFDNKLQELLAQVEKTGISN 216
>UNIPROTKB|F1NU38 [details] [associations]
symbol:TRAPPC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0005801 PANTHER:PTHR23249
GeneTree:ENSGT00510000047061 EMBL:AADN02058035 EMBL:AADN02058036
IPI:IPI00571421 Ensembl:ENSGALT00000012488 ArrayExpress:F1NU38
Uniprot:F1NU38
Length = 210
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 97/155 (62%), Positives = 125/155 (80%)
Query: 1 GHVLTAVNDAVIKNGQLD-DGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPL 59
GH + A+N A + NG+L DG DVLEFLS P ++PV + F R R+++NEK+ LASMF+ L
Sbjct: 51 GHAVLAINGAEV-NGRLTADGKDVLEFLSNPANYPVSIRFGRHRLSSNEKLMLASMFHSL 109
Query: 60 FAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYA 119
FAI SQLSPE SSGIE+LE DTFKLHC+QTLTG+KF+++ D Q+G+D +L+KIYE+Y+
Sbjct: 110 FAIGSQLSPEVGSSGIEMLETDTFKLHCFQTLTGIKFVVLADPRQAGIDALLRKIYEIYS 169
Query: 120 DYALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
D+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 170 DFALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 204
>UNIPROTKB|F1NXY8 [details] [associations]
symbol:TRAPPC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0030008 "TRAPP complex"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0030425
GO:GO:0008021 GO:GO:0005795 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0030008 PANTHER:PTHR23249 GeneTree:ENSGT00510000047061
OMA:VYIVSKS EMBL:AADN02058035 EMBL:AADN02058036 IPI:IPI00820567
Ensembl:ENSGALT00000040575 ArrayExpress:F1NXY8 Uniprot:F1NXY8
Length = 218
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 97/155 (62%), Positives = 125/155 (80%)
Query: 1 GHVLTAVNDAVIKNGQLD-DGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPL 59
GH + A+N A + NG+L DG DVLEFLS P ++PV + F R R+++NEK+ LASMF+ L
Sbjct: 59 GHAVLAINGAEV-NGRLTADGKDVLEFLSNPANYPVSIRFGRHRLSSNEKLMLASMFHSL 117
Query: 60 FAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYA 119
FAI SQLSPE SSGIE+LE DTFKLHC+QTLTG+KF+++ D Q+G+D +L+KIYE+Y+
Sbjct: 118 FAIGSQLSPEVGSSGIEMLETDTFKLHCFQTLTGIKFVVLADPRQAGIDALLRKIYEIYS 177
Query: 120 DYALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
D+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 178 DFALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 212
>UNIPROTKB|Q9Y296 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISS] [GO:0008021
"synaptic vesicle" evidence=ISS] [GO:0016358 "dendrite development"
evidence=ISS] [GO:0030425 "dendrite" evidence=ISS] [GO:0045202
"synapse" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0005783
EMBL:CH471065 Pathway_Interaction_DB:syndecan_2_pathway
GO:GO:0030425 GO:GO:0008021 GO:GO:0005795 GO:GO:0016358
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
PDB:2J3T PDBsum:2J3T eggNOG:COG5122 CTD:51399 HOGENOM:HOG000165618
HOVERGEN:HBG054226 OMA:VYIVSKS OrthoDB:EOG4JT06F EMBL:AF105025
EMBL:AF078862 EMBL:AF161520 EMBL:AF151862 EMBL:AK290520
EMBL:BC010866 IPI:IPI00007691 RefSeq:NP_057230.1 UniGene:Hs.132760
PDB:2JSN PDB:2ZMV PDBsum:2JSN PDBsum:2ZMV ProteinModelPortal:Q9Y296
SMR:Q9Y296 DIP:DIP-37871N IntAct:Q9Y296 MINT:MINT-1424006
STRING:Q9Y296 PhosphoSite:Q9Y296 DMDM:20178121 PaxDb:Q9Y296
PRIDE:Q9Y296 DNASU:51399 Ensembl:ENST00000533632 GeneID:51399
KEGG:hsa:51399 UCSC:uc010ryn.2 GeneCards:GC11P118889
HGNC:HGNC:19943 HPA:HPA039752 HPA:HPA041371 MIM:610971
neXtProt:NX_Q9Y296 PharmGKB:PA134906910 InParanoid:Q9Y296
PhylomeDB:Q9Y296 ChiTaRS:TRAPPC4 EvolutionaryTrace:Q9Y296
GenomeRNAi:51399 NextBio:54937 ArrayExpress:Q9Y296 Bgee:Q9Y296
CleanEx:HS_TRAPPC4 Genevestigator:Q9Y296 GermOnline:ENSG00000196655
Uniprot:Q9Y296
Length = 219
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 93/154 (60%), Positives = 120/154 (77%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+ LF
Sbjct: 60 GHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD 120
AI SQLSPE SSGIE+LE DTFKLHCYQTLTG+KF+++ D Q+G+D +L+KIYE+Y+D
Sbjct: 120 AIGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSD 179
Query: 121 YALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 180 FALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 213
>UNIPROTKB|Q2TBL9 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9913 "Bos taurus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030008 "TRAPP complex" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0005783
GO:GO:0030425 GO:GO:0008021 GO:GO:0005795 GO:GO:0016358
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
eggNOG:COG5122 EMBL:BC109939 IPI:IPI00693822 RefSeq:NP_001033591.1
RefSeq:NP_001178133.1 UniGene:Bt.15766 UniGene:Bt.88065
STRING:Q2TBL9 PRIDE:Q2TBL9 Ensembl:ENSBTAT00000010619 GeneID:504391
GeneID:785345 KEGG:bta:504391 KEGG:bta:785345 CTD:51399
GeneTree:ENSGT00510000047061 HOGENOM:HOG000165618
HOVERGEN:HBG054226 InParanoid:Q2TBL9 OMA:VYIVSKS OrthoDB:EOG4JT06F
NextBio:20866638 Uniprot:Q2TBL9
Length = 219
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 92/154 (59%), Positives = 120/154 (77%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+ LF
Sbjct: 60 GHAVLAINGVDVNGKYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD 120
AI SQLSPE SSGIE+LE DTFKLHC+QTLTG+KF+++ D Q+G+D +L+KIYE+Y+D
Sbjct: 120 AIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSD 179
Query: 121 YALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 180 FALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 213
>UNIPROTKB|E2RSA9 [details] [associations]
symbol:TRAPPC4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030425 "dendrite" evidence=IEA]
[GO:0030008 "TRAPP complex" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0030425
GO:GO:0008021 GO:GO:0005795 GO:GO:0016358 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249 CTD:51399
GeneTree:ENSGT00510000047061 OMA:VYIVSKS EMBL:AAEX03003442
RefSeq:XP_860256.2 Ensembl:ENSCAFT00000019671 GeneID:479411
KEGG:cfa:479411 NextBio:20854598 Uniprot:E2RSA9
Length = 219
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 92/154 (59%), Positives = 120/154 (77%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+ LF
Sbjct: 60 GHAVLAINGVDVNGKYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD 120
AI SQLSPE SSGIE+LE DTFKLHC+QTLTG+KF+++ D Q+G+D +L+KIYE+Y+D
Sbjct: 120 AIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSD 179
Query: 121 YALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 180 FALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 213
>UNIPROTKB|F2Z5G7 [details] [associations]
symbol:TRAPPC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030425 "dendrite" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0005795 "Golgi stack" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 GO:GO:0030425 GO:GO:0008021
GO:GO:0005795 GO:GO:0016358 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0030008 PANTHER:PTHR23249 GeneTree:ENSGT00510000047061
OMA:VYIVSKS EMBL:CU695209 RefSeq:XP_003129966.1 UniGene:Ssc.54303
PRIDE:F2Z5G7 Ensembl:ENSSSCT00000016470 GeneID:100516212
KEGG:ssc:100516212 Uniprot:F2Z5G7
Length = 219
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 92/154 (59%), Positives = 120/154 (77%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+ LF
Sbjct: 60 GHAVLAINGVDVNGKYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD 120
AI SQLSPE SSGIE+LE DTFKLHC+QTLTG+KF+++ D Q+G+D +L+KIYE+Y+D
Sbjct: 120 AIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSD 179
Query: 121 YALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 180 FALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 213
>MGI|MGI:1926211 [details] [associations]
symbol:Trappc4 "trafficking protein particle complex 4"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005795 "Golgi
stack" evidence=IDA] [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=TAS] [GO:0016358 "dendrite development"
evidence=IDA] [GO:0030008 "TRAPP complex" evidence=IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0045202 "synapse" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0045212 "neurotransmitter receptor
biosynthetic process" evidence=TAS] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 MGI:MGI:1926211 GO:GO:0005783
GO:GO:0005886 GO:GO:0016192 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0008021 GO:GO:0005795 GO:GO:0016358
GO:GO:0045212 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008
PANTHER:PTHR23249 eggNOG:COG5122 CTD:51399
GeneTree:ENSGT00510000047061 HOGENOM:HOG000165618
HOVERGEN:HBG054226 OMA:VYIVSKS OrthoDB:EOG4JT06F ChiTaRS:TRAPPC4
EMBL:AF233340 EMBL:BC038898 EMBL:AK005276 IPI:IPI00112785
RefSeq:NP_068561.1 UniGene:Mm.29814 ProteinModelPortal:Q9ES56
SMR:Q9ES56 IntAct:Q9ES56 STRING:Q9ES56 PhosphoSite:Q9ES56
PaxDb:Q9ES56 PRIDE:Q9ES56 DNASU:60409 Ensembl:ENSMUST00000034623
GeneID:60409 KEGG:mmu:60409 InParanoid:Q9ES56 NextBio:314853
Bgee:Q9ES56 CleanEx:MM_TRAPPC4 Genevestigator:Q9ES56
GermOnline:ENSMUSG00000032112 Uniprot:Q9ES56
Length = 219
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 92/154 (59%), Positives = 120/154 (77%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+ LF
Sbjct: 60 GHAVLAINGMDVNGKYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD 120
AI SQLSPE SSGIE+LE DTFKLHC+QTLTG+KF+++ D Q+G+D +L+KIYE+Y+D
Sbjct: 120 AIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSD 179
Query: 121 YALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 180 FALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 213
>RGD|1302991 [details] [associations]
symbol:Trappc4 "trafficking protein particle complex 4"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005795 "Golgi stack"
evidence=IEA;ISO] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0016358 "dendrite development"
evidence=IEA;ISO] [GO:0030008 "TRAPP complex" evidence=IEA;ISO]
[GO:0030425 "dendrite" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO] InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
RGD:1302991 GO:GO:0005783 GO:GO:0030425 GO:GO:0008021 GO:GO:0005795
GO:GO:0016358 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008
PANTHER:PTHR23249 eggNOG:COG5122 CTD:51399
GeneTree:ENSGT00510000047061 HOGENOM:HOG000165618
HOVERGEN:HBG054226 OrthoDB:EOG4JT06F EMBL:AY373378 EMBL:BC098628
IPI:IPI00650101 RefSeq:NP_001003708.1 UniGene:Rn.9580
ProteinModelPortal:Q69BT7 SMR:Q69BT7 STRING:Q69BT7
Ensembl:ENSRNOT00000016145 GeneID:367073 KEGG:rno:367073
UCSC:RGD:1302991 InParanoid:Q69BT7 NextBio:690592
Genevestigator:Q69BT7 Uniprot:Q69BT7
Length = 219
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 90/154 (58%), Positives = 118/154 (76%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GH + A+N + DG +VLE+ ++PV + F RPR+T+NEK+ LASMF+ LF
Sbjct: 60 GHAVLAINGMDVNGKYTADGKEVLEYPGNSANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD 120
AI SQLSPE SSGIE+LE DTFKLHC+QTLTG+KF+++ D Q+G+D +L+KIYE+Y+D
Sbjct: 120 AIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSD 179
Query: 121 YALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 180 FALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 213
>ZFIN|ZDB-GENE-040426-1734 [details] [associations]
symbol:trappc4 "trafficking protein particle
complex 4" species:7955 "Danio rerio" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
ZFIN:ZDB-GENE-040426-1734 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0005801 PANTHER:PTHR23249 eggNOG:COG5122 CTD:51399
HOGENOM:HOG000165618 HOVERGEN:HBG054226 OrthoDB:EOG4JT06F
EMBL:BC059594 IPI:IPI00502097 RefSeq:NP_957058.1 UniGene:Dr.82687
ProteinModelPortal:Q6PBT2 SMR:Q6PBT2 STRING:Q6PBT2 DNASU:393737
GeneID:393737 KEGG:dre:393737 InParanoid:Q6PBT2 NextBio:20814738
ArrayExpress:Q6PBT2 Uniprot:Q6PBT2
Length = 219
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 87/155 (56%), Positives = 121/155 (78%)
Query: 1 GHVLTAVNDAVIKNGQLD-DGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPL 59
GH + ++N + NG+ +G ++ E+L P ++PV + F R ++++NEK+ LASMF+ L
Sbjct: 60 GHAVLSINGVDV-NGKFTAEGKEIQEYLRDPANYPVSIRFGRQKLSSNEKLMLASMFHSL 118
Query: 60 FAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYA 119
FAI SQLSPE SSGIE+LE D FKLHC+QTLTG+KF+++ D QSG+D +L+KIYE+Y+
Sbjct: 119 FAIGSQLSPEVGSSGIEMLETDMFKLHCFQTLTGIKFIVLADPRQSGIDALLRKIYEIYS 178
Query: 120 DYALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
D+ALKNPFYSLEMPIRCELFD +L++ L+ EK G
Sbjct: 179 DFALKNPFYSLEMPIRCELFDQNLKSALEIAEKAG 213
>UNIPROTKB|E9PN70 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 HGNC:HGNC:19943 ChiTaRS:TRAPPC4 EMBL:AP003392
IPI:IPI00980491 ProteinModelPortal:E9PN70 SMR:E9PN70
Ensembl:ENST00000533058 UCSC:uc010ryq.2 ArrayExpress:E9PN70
Bgee:E9PN70 Uniprot:E9PN70
Length = 257
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 83/135 (61%), Positives = 107/135 (79%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+ LF
Sbjct: 60 GHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYAD 120
AI SQLSPE SSGIE+LE DTFKLHCYQTLTG+KF+++ D Q+G+D +L+KIYE+Y+D
Sbjct: 120 AIGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSD 179
Query: 121 YALKNPFYSLEMPIR 135
+ALKNPFYSLEMPIR
Sbjct: 180 FALKNPFYSLEMPIR 194
>UNIPROTKB|E9PQE8 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 HGNC:HGNC:19943 ChiTaRS:TRAPPC4 EMBL:AP003392
IPI:IPI00982028 ProteinModelPortal:E9PQE8 SMR:E9PQE8
Ensembl:ENST00000528230 ArrayExpress:E9PQE8 Bgee:E9PQE8
Uniprot:E9PQE8
Length = 176
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 67/96 (69%), Positives = 82/96 (85%)
Query: 59 LFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELY 118
LFAI SQLSPE SSGIE+LE DTFKLHCYQTLTG+KF+++ D Q+G+D +L+KIYE+Y
Sbjct: 75 LFAIGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADPRQAGIDSLLRKIYEIY 134
Query: 119 ADYALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTG 154
+D+ALKNPFYSLEMPIRCELFD +L+ L+ EK G
Sbjct: 135 SDFALKNPFYSLEMPIRCELFDQNLKLALEVAEKAG 170
>WB|WBGene00018088 [details] [associations]
symbol:F36D4.2 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 eggNOG:COG5122 GeneTree:ENSGT00510000047061
HOGENOM:HOG000165618 OMA:VYIVSKS EMBL:FO081027 PIR:T29312
RefSeq:NP_505435.1 UniGene:Cel.3721 ProteinModelPortal:Q20100
SMR:Q20100 DIP:DIP-27425N IntAct:Q20100 MINT:MINT-1054082
STRING:Q20100 PaxDb:Q20100 EnsemblMetazoa:F36D4.2 GeneID:185357
KEGG:cel:CELE_F36D4.2 UCSC:F36D4.2 CTD:185357 WormBase:F36D4.2
InParanoid:Q20100 NextBio:927984 Uniprot:Q20100
Length = 224
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 73/155 (47%), Positives = 104/155 (67%)
Query: 2 HVLTAVNDAVIKNGQLDDGT---DVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYP 58
+ + +VN + +L G +VLE+L + + +PV + F P ++TNEKI L+SMF+
Sbjct: 63 YYVKSVNGETVSGTRLQLGAQQVNVLEYLQEEDHYPVTVKFAAPTVSTNEKIILSSMFHS 122
Query: 59 LFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQS-GLDLILKKIYEL 117
LF IA QLSP KSSG+EVLE FKL C Q+ TGVKF+++ + D +L K+YEL
Sbjct: 123 LFTIAVQLSPCQKSSGVEVLETTQFKLFCLQSRTGVKFVVITSAASNIAADSLLSKMYEL 182
Query: 118 YADYALKNPFYSLEMPIRCELFDTHLQNLLQQHEK 152
Y D+ALKNPFYS++MPIR + FD ++ LL++ EK
Sbjct: 183 YTDFALKNPFYSIDMPIRAQKFDEAIKTLLERAEK 217
>UNIPROTKB|Q20100 [details] [associations]
symbol:F36D4.2 "Protein F36D4.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801 PANTHER:PTHR23249
eggNOG:COG5122 GeneTree:ENSGT00510000047061 HOGENOM:HOG000165618
OMA:VYIVSKS EMBL:FO081027 PIR:T29312 RefSeq:NP_505435.1
UniGene:Cel.3721 ProteinModelPortal:Q20100 SMR:Q20100
DIP:DIP-27425N IntAct:Q20100 MINT:MINT-1054082 STRING:Q20100
PaxDb:Q20100 EnsemblMetazoa:F36D4.2 GeneID:185357
KEGG:cel:CELE_F36D4.2 UCSC:F36D4.2 CTD:185357 WormBase:F36D4.2
InParanoid:Q20100 NextBio:927984 Uniprot:Q20100
Length = 224
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 73/155 (47%), Positives = 104/155 (67%)
Query: 2 HVLTAVNDAVIKNGQLDDGT---DVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYP 58
+ + +VN + +L G +VLE+L + + +PV + F P ++TNEKI L+SMF+
Sbjct: 63 YYVKSVNGETVSGTRLQLGAQQVNVLEYLQEEDHYPVTVKFAAPTVSTNEKIILSSMFHS 122
Query: 59 LFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQS-GLDLILKKIYEL 117
LF IA QLSP KSSG+EVLE FKL C Q+ TGVKF+++ + D +L K+YEL
Sbjct: 123 LFTIAVQLSPCQKSSGVEVLETTQFKLFCLQSRTGVKFVVITSAASNIAADSLLSKMYEL 182
Query: 118 YADYALKNPFYSLEMPIRCELFDTHLQNLLQQHEK 152
Y D+ALKNPFYS++MPIR + FD ++ LL++ EK
Sbjct: 183 YTDFALKNPFYSIDMPIRAQKFDEAIKTLLERAEK 217
>UNIPROTKB|B4DME1 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 HOGENOM:HOG000165618 HOVERGEN:HBG054226
UniGene:Hs.132760 HGNC:HGNC:19943 ChiTaRS:TRAPPC4 EMBL:AP003392
EMBL:AK297422 IPI:IPI00910488 SMR:B4DME1 STRING:B4DME1
Ensembl:ENST00000434101 UCSC:uc010ryp.2 Uniprot:B4DME1
Length = 165
Score = 306 (112.8 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 54/83 (65%), Positives = 70/83 (84%)
Query: 72 SSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYADYALKNPFYSLE 131
+ G E+LE DTFKLHCYQTLTG+KF+++ D Q+G+D +L+KIYE+Y+D+ALKNPFYSLE
Sbjct: 77 ADGKEMLETDTFKLHCYQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSDFALKNPFYSLE 136
Query: 132 MPIRCELFDTHLQNLLQQHEKTG 154
MPIRCELFD +L+ L+ EK G
Sbjct: 137 MPIRCELFDQNLKLALEVAEKAG 159
Score = 42 (19.8 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLE 25
GH + A+N + DG ++LE
Sbjct: 60 GHAVLAINGMDVNGRYTADGKEMLE 84
>TAIR|locus:2180117 [details] [associations]
symbol:AT5G02280 "AT5G02280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0010264
"myo-inositol hexakisphosphate biosynthetic process" evidence=RCA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0005801 PANTHER:PTHR23249 EMBL:AL162874 UniGene:At.21647
UniGene:At.71133 eggNOG:COG5122 HOGENOM:HOG000165619 EMBL:AY088869
EMBL:BT003933 EMBL:BT005052 IPI:IPI00541765 PIR:T48249
RefSeq:NP_195848.1 ProteinModelPortal:Q9LZ97 SMR:Q9LZ97
PaxDb:Q9LZ97 PRIDE:Q9LZ97 DNASU:831680 EnsemblPlants:AT5G02280.1
GeneID:831680 KEGG:ath:AT5G02280 TAIR:At5g02280 InParanoid:Q9LZ97
OMA:LHGVHAI PhylomeDB:Q9LZ97 ProtClustDB:CLSN2687323
ArrayExpress:Q9LZ97 Genevestigator:Q9LZ97 Uniprot:Q9LZ97
Length = 141
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 58/109 (53%), Positives = 79/109 (72%)
Query: 40 TRPRMTTNEKIFLASMFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIV 99
T+ RM TN+ + +AS+++ + AI+ QLSP SGIE+LEADTF LHC+Q+L G KF +V
Sbjct: 24 TKGRMDTNDSLRVASLWHSMHAISQQLSPVNGCSGIELLEADTFDLHCFQSLPGTKFFVV 83
Query: 100 GDTNQSGLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
+ ++ +L+ IYELY DY LKNPFY +EMPIRCELFD +L +Q
Sbjct: 84 CEPGTPHMESLLRYIYELYTDYVLKNPFYEIEMPIRCELFDINLTQAVQ 132
>DICTYBASE|DDB_G0280827 [details] [associations]
symbol:trappc4 "trafficking protein particle complex
subunit 4" species:44689 "Dictyostelium discoideum" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 dictyBase:DDB_G0280827
GO:GO:0005783 GO:GO:0005794 GenomeReviews:CM000152_GR GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0005801 PANTHER:PTHR23249 EMBL:AAFI02000025
eggNOG:COG5122 RefSeq:XP_641000.1 ProteinModelPortal:Q54UU1
PRIDE:Q54UU1 EnsemblProtists:DDB0252669 GeneID:8621803
KEGG:ddi:DDB_G0280827 OMA:HLLWIIN Uniprot:Q54UU1
Length = 135
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/110 (52%), Positives = 73/110 (66%)
Query: 43 RMTTNEKIFLASMFYPLFAIASQLSP-EPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGD 101
+++ N I L S F+ L AIAS LSP SSGIEV+E + FKL C+QT TG+KF ++ D
Sbjct: 26 KLSHNSYIRLGSTFHSLHAIASNLSPVSGSSSGIEVIETEAFKLQCFQTHTGIKFYVIAD 85
Query: 102 TNQSGLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNLLQQHE 151
N L+ +L +YELY DY LKNPFY +EM IRC+LFD L LL E
Sbjct: 86 PNHQQLEELLHGVYELYTDYVLKNPFYEIEMQIRCDLFDYKLNRLLGVRE 135
>UNIPROTKB|J3KP27 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 HGNC:HGNC:19943 ChiTaRS:TRAPPC4 EMBL:AP003392
ProteinModelPortal:J3KP27 Ensembl:ENST00000359005 Uniprot:J3KP27
Length = 181
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 55/92 (59%), Positives = 68/92 (73%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFYPLF 60
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+ LF
Sbjct: 60 GHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119
Query: 61 AIASQLSPEPKSSGIEVLEADTFKLHCYQTLT 92
AI SQLSPE SSGIE+LE DTFKLHCYQTLT
Sbjct: 120 AIGSQLSPEQGSSGIEMLETDTFKLHCYQTLT 151
>POMBASE|SPBC3B9.12 [details] [associations]
symbol:trs23 "TRAPP complex subunit Trs23 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0030008 "TRAPP
complex" evidence=ISO] [GO:0032313 "regulation of Rab GTPase
activity" evidence=IC] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=ISO] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 PomBase:SPBC3B9.12 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0032313
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249 eggNOG:COG5122
OMA:HLLWIIN PIR:T40351 RefSeq:NP_596670.1 ProteinModelPortal:O43041
STRING:O43041 EnsemblFungi:SPBC3B9.12.1 GeneID:2540976
KEGG:spo:SPBC3B9.12 HOGENOM:HOG000165619 OrthoDB:EOG4P2TBS
NextBio:20802091 Uniprot:O43041
Length = 132
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 53/107 (49%), Positives = 75/107 (70%)
Query: 44 MTTNEKIFLASMFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTN 103
+T NE + LA + + AI++Q+SP P SSGI++LEA TF +H QT TG+KF++ +
Sbjct: 26 LTPNEYLVLAGTIHGVHAISTQISPLPGSSGIQLLEAGTFNMHILQTHTGMKFVLFTEKK 85
Query: 104 QSGLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNLLQQH 150
+ L L+K YELY+DY LKNPFY+LEMPI+C+LFD L+ + H
Sbjct: 86 TTNARLQLQKFYELYSDYVLKNPFYTLEMPIKCQLFDEQLKRYIDSH 132
>UNIPROTKB|E9PKS9 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 HGNC:HGNC:19943 ChiTaRS:TRAPPC4 EMBL:AP003392
IPI:IPI00978646 ProteinModelPortal:E9PKS9 SMR:E9PKS9
Ensembl:ENST00000525303 ArrayExpress:E9PKS9 Bgee:E9PKS9
Uniprot:E9PKS9
Length = 126
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 38/64 (59%), Positives = 53/64 (82%)
Query: 91 LTGVKFMIVGDTNQSGLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNLLQQH 150
+ G+KF+++ D Q+G+D +L+KIYE+Y+D+ALKNPFYSLEMPIRCELFD +L+ L+
Sbjct: 57 IRGIKFVVLADPRQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALEVA 116
Query: 151 EKTG 154
EK G
Sbjct: 117 EKAG 120
>SGD|S000002654 [details] [associations]
symbol:TRS23 "Subunit of the transport protein particle
(TRAPP) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0000407 "pre-autophagosomal structure" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IMP] [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA;IGI;IMP] [GO:0030008 "TRAPP complex"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA;IMP] [GO:0006914 "autophagy" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 SGD:S000002654
GO:GO:0005783 GO:GO:0006914 EMBL:BK006938 GO:GO:0006888 EMBL:Z49701
RefSeq:NP_010532.3 GeneID:851833 KEGG:sce:YDR246W SUPFAM:SSF64356
GO:GO:0051276 GO:GO:0000407 GO:GO:0030008 PDB:3CUE PDBsum:3CUE
PANTHER:PTHR23249 eggNOG:COG5122 GeneTree:ENSGT00510000047061
HOGENOM:HOG000165619 OrthoDB:EOG4P2TBS PIR:S54542
RefSeq:NP_010535.3 ProteinModelPortal:Q03784 SMR:Q03784
DIP:DIP-5813N IntAct:Q03784 MINT:MINT-640620 STRING:Q03784
PaxDb:Q03784 EnsemblFungi:YDR246W GeneID:851836 KEGG:sce:YDR249C
CYGD:YDR246w OMA:YLILAST EvolutionaryTrace:Q03784 NextBio:969724
Genevestigator:Q03784 GermOnline:YDR246W Uniprot:Q03784
Length = 219
Score = 117 (46.2 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 108 DLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
D L+K+Y LY+DY +K+P YS+EMPIR LFD ++ +++
Sbjct: 176 DNFLRKVYCLYSDYVMKDPSYSMEMPIRSNLFDEKVKKMVE 216
Score = 68 (29.0 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 43 RMTTNEKIFLASMFYPLFAIASQLSPE 69
++ +NE + LAS + +FAIASQL+P+
Sbjct: 27 KLNSNEYLILASTLHGVFAIASQLTPK 53
Score = 68 (29.0 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 73 SGIEVLEADTFKLHCYQTLTGVKFMIVGDT 102
SG+ L D F + YQTLTG+KF+ + +
Sbjct: 117 SGLRQLCTDQFTMFIYQTLTGLKFVAISSS 146
>CGD|CAL0000449 [details] [associations]
symbol:orf19.3673 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030008 "TRAPP complex" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 CGD:CAL0000449
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801 EMBL:AACQ01000118
EMBL:AACQ01000119 PANTHER:PTHR23249 eggNOG:COG5122
HOGENOM:HOG000165619 RefSeq:XP_713733.1 RefSeq:XP_713767.1
ProteinModelPortal:Q59VY5 STRING:Q59VY5 GeneID:3644584
GeneID:3644610 KEGG:cal:CaO19.11157 KEGG:cal:CaO19.3673
Uniprot:Q59VY5
Length = 168
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 32/87 (36%), Positives = 56/87 (64%)
Query: 67 SPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTN----QSGLDLILKKIYELYADYA 122
S +G++ +E D F L+ +QT++G+KF+++ N ++ D + + +Y LY+DY
Sbjct: 81 SANSNRTGLQKIETDMFNLYIFQTVSGLKFIMITAPNVANSETVTDELFRHLYILYSDYV 140
Query: 123 LKNPFYSLEMPIRCELFDTHLQNLLQQ 149
+K+PFYSL+MPI+ LFD ++ L Q
Sbjct: 141 MKDPFYSLDMPIKSSLFDGRVKQLFAQ 167
>DICTYBASE|DDB_G0273579 [details] [associations]
symbol:DDB_G0273579 "Trafficking protein particle
complex subunit 1" species:44689 "Dictyostelium discoideum"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 dictyBase:DDB_G0273579
dictyBase:DDB_G0273467 GO:GO:0005783 GO:GO:0005794
GenomeReviews:CM000151_GR GO:GO:0006888 SUPFAM:SSF64356
EMBL:AAFI02000010 GO:GO:0005801 PANTHER:PTHR23249 OMA:FLYYKTN
RefSeq:XP_644579.1 RefSeq:XP_644672.1 ProteinModelPortal:Q557G3
STRING:Q557G3 EnsemblProtists:DDB0217147 EnsemblProtists:DDB0217205
GeneID:8618944 GeneID:8619033 KEGG:ddi:DDB_G0273467
KEGG:ddi:DDB_G0273579 eggNOG:COG5122 ProtClustDB:CLSZ2431219
Uniprot:Q557G3
Length = 142
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 47 NEKIFLASMFYPLFAIASQLSPEP--KSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQ 104
++K+ L M Y L A + SP+ +G + T+KLH Y+TL+ +KF+I+ D N
Sbjct: 32 DQKL-LFGMLYSLKAFITSSSPKKIDDKTGFHCYKTSTYKLHYYETLSCIKFIIMSDPNV 90
Query: 105 SGLDLILKKIY-ELYADYALKNPFYSLEMPIRCELFDTHLQNLLQQ 149
L LKKIY +++ +Y +KNP Y ++C+ F L L+Q
Sbjct: 91 PDLRDDLKKIYSQIFVEYVIKNPIYKHGTTVKCDTFINQLNLYLKQ 136
>DICTYBASE|DDB_G0273467 [details] [associations]
symbol:DDB_G0273467 "Trafficking protein particle
complex subunit 1" species:44689 "Dictyostelium discoideum"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 dictyBase:DDB_G0273579
dictyBase:DDB_G0273467 GO:GO:0005783 GO:GO:0005794
GenomeReviews:CM000151_GR GO:GO:0006888 SUPFAM:SSF64356
EMBL:AAFI02000010 GO:GO:0005801 PANTHER:PTHR23249 OMA:FLYYKTN
RefSeq:XP_644579.1 RefSeq:XP_644672.1 ProteinModelPortal:Q557G3
STRING:Q557G3 EnsemblProtists:DDB0217147 EnsemblProtists:DDB0217205
GeneID:8618944 GeneID:8619033 KEGG:ddi:DDB_G0273467
KEGG:ddi:DDB_G0273579 eggNOG:COG5122 ProtClustDB:CLSZ2431219
Uniprot:Q557G3
Length = 142
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 47 NEKIFLASMFYPLFAIASQLSPEP--KSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQ 104
++K+ L M Y L A + SP+ +G + T+KLH Y+TL+ +KF+I+ D N
Sbjct: 32 DQKL-LFGMLYSLKAFITSSSPKKIDDKTGFHCYKTSTYKLHYYETLSCIKFIIMSDPNV 90
Query: 105 SGLDLILKKIY-ELYADYALKNPFYSLEMPIRCELFDTHLQNLLQQ 149
L LKKIY +++ +Y +KNP Y ++C+ F L L+Q
Sbjct: 91 PDLRDDLKKIYSQIFVEYVIKNPIYKHGTTVKCDTFINQLNLYLKQ 136
>UNIPROTKB|G3V1A0 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005795 "Golgi stack"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0016358 "dendrite development" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
InterPro:IPR007233 Pfam:PF04099 EMBL:CH471065 GO:GO:0030425
GO:GO:0008021 GO:GO:0005795 GO:GO:0016358 GO:GO:0006888
GO:GO:0030008 PANTHER:PTHR23249 HGNC:HGNC:19943 ChiTaRS:TRAPPC4
EMBL:AP003392 ProteinModelPortal:G3V1A0 SMR:G3V1A0 PRIDE:G3V1A0
Ensembl:ENST00000525079 ArrayExpress:G3V1A0 Bgee:G3V1A0
Uniprot:G3V1A0
Length = 117
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFY 57
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+
Sbjct: 60 GHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFH 116
>UNIPROTKB|G5EA23 [details] [associations]
symbol:TRAPPC4 "HCG38438, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005801 "cis-Golgi network" evidence=IEA]
InterPro:IPR007233 Pfam:PF04099 EMBL:CH471065 GO:GO:0006888
GO:GO:0005801 PANTHER:PTHR23249 HGNC:HGNC:19943 ChiTaRS:TRAPPC4
EMBL:AP003392 ProteinModelPortal:G5EA23 SMR:G5EA23 PRIDE:G5EA23
Ensembl:ENST00000533012 ArrayExpress:G5EA23 Bgee:G5EA23
Uniprot:G5EA23
Length = 126
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 1 GHVLTAVNDAVIKNGQLDDGTDVLEFLSKPESFPVKLTFTRPRMTTNEKIFLASMFY 57
GH + A+N + DG +VLE+L P ++PV + F RPR+T+NEK+ LASMF+
Sbjct: 60 GHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFH 116
>TAIR|locus:2008326 [details] [associations]
symbol:AT1G51160 "AT1G51160" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009832 "plant-type cell wall
biogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0005801 HOGENOM:HOG000172118
PANTHER:PTHR23249 EMBL:AC079828 EMBL:AC006085 OMA:FLYYKTN
eggNOG:COG5122 EMBL:BT004796 EMBL:AK227820 IPI:IPI00527134
PIR:B96549 RefSeq:NP_001031168.1 RefSeq:NP_175528.1
UniGene:At.11222 ProteinModelPortal:Q9SYB8 SMR:Q9SYB8 STRING:Q9SYB8
PaxDb:Q9SYB8 PRIDE:Q9SYB8 DNASU:841539 EnsemblPlants:AT1G51160.1
EnsemblPlants:AT1G51160.2 GeneID:841539 KEGG:ath:AT1G51160
TAIR:At1g51160 InParanoid:Q9SYB8 PhylomeDB:Q9SYB8
ProtClustDB:CLSN2682944 Genevestigator:Q9SYB8 Uniprot:Q9SYB8
Length = 169
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 81 DTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIYELYADYALKNPFYSLEMPIRCELFD 140
+T+KL +T +G+K ++V L LK IY LY +Y +KNP YS PI+ ELF+
Sbjct: 99 NTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVKNPIYSPGSPIKSELFN 158
Query: 141 THLQNLLQ 148
T L ++
Sbjct: 159 TALDQYVR 166
>MGI|MGI:1098727 [details] [associations]
symbol:Trappc1 "trafficking protein particle complex 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IDA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 MGI:MGI:1098727 GO:GO:0005783 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 eggNOG:NOG237222 HOGENOM:HOG000172118
PANTHER:PTHR23249 GeneTree:ENSGT00510000047863 EMBL:AL645527
PDB:2J3T PDBsum:2J3T CTD:58485 HOVERGEN:HBG056032 OMA:FLYYKTN
OrthoDB:EOG45HRZS IPI:IPI00275577 RefSeq:NP_001019377.1
UniGene:Mm.28073 ProteinModelPortal:Q5NCF2 SMR:Q5NCF2 IntAct:Q5NCF2
STRING:Q5NCF2 PhosphoSite:Q5NCF2 PaxDb:Q5NCF2 PRIDE:Q5NCF2
Ensembl:ENSMUST00000102601 Ensembl:ENSMUST00000102602 GeneID:245828
KEGG:mmu:245828 EvolutionaryTrace:Q5NCF2 NextBio:386942 Bgee:Q5NCF2
CleanEx:MM_TRAPPC1 Genevestigator:Q5NCF2 Uniprot:Q5NCF2
Length = 145
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 55 MFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKI 114
M + + + S++SP G + +KLH Y+T TG+K ++ D + +L I
Sbjct: 41 MLFSIRSFVSKMSPLDMKDGFLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHI 100
Query: 115 YE-LYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
Y LY ++ +KNP L ++ ELF + L + ++
Sbjct: 101 YSALYVEFVVKNPLCPLGQTVQSELFRSRLDSYVR 135
>RGD|1311365 [details] [associations]
symbol:Trappc1 "trafficking protein particle complex 1"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA;ISO]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 RGD:1311365
GO:GO:0005783 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008
eggNOG:NOG237222 HOGENOM:HOG000172118 PANTHER:PTHR23249
GeneTree:ENSGT00510000047863 CTD:58485 HOVERGEN:HBG056032
OMA:FLYYKTN EMBL:AY903234 EMBL:AY903235 EMBL:AY903236 EMBL:AY903237
EMBL:AY903238 IPI:IPI00369581 RefSeq:NP_001034467.1 UniGene:Rn.2918
ProteinModelPortal:Q2KMM2 SMR:Q2KMM2 STRING:Q2KMM2 PRIDE:Q2KMM2
Ensembl:ENSRNOT00000057079 GeneID:287427 KEGG:rno:287427
UCSC:RGD:1311365 InParanoid:Q2KMM2 NextBio:626109
ArrayExpress:Q2KMM2 Genevestigator:Q2KMM2 Uniprot:Q2KMM2
Length = 145
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 55 MFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKI 114
M + + + S++SP G + +KLH Y+T TG+K ++ D + +L I
Sbjct: 41 MLFSIRSFVSKMSPLDMKDGFLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHI 100
Query: 115 YE-LYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
Y LY ++ +KNP L ++ ELF + L + ++
Sbjct: 101 YSALYVEFVVKNPLCPLGQTVQSELFRSRLDSYVR 135
>UNIPROTKB|Q2KMM2 [details] [associations]
symbol:Trappc1 "Trafficking protein particle complex
subunit 1" species:10116 "Rattus norvegicus" [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 RGD:1311365 GO:GO:0005783
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008 eggNOG:NOG237222
HOGENOM:HOG000172118 PANTHER:PTHR23249 GeneTree:ENSGT00510000047863
CTD:58485 HOVERGEN:HBG056032 OMA:FLYYKTN EMBL:AY903234
EMBL:AY903235 EMBL:AY903236 EMBL:AY903237 EMBL:AY903238
IPI:IPI00369581 RefSeq:NP_001034467.1 UniGene:Rn.2918
ProteinModelPortal:Q2KMM2 SMR:Q2KMM2 STRING:Q2KMM2 PRIDE:Q2KMM2
Ensembl:ENSRNOT00000057079 GeneID:287427 KEGG:rno:287427
UCSC:RGD:1311365 InParanoid:Q2KMM2 NextBio:626109
ArrayExpress:Q2KMM2 Genevestigator:Q2KMM2 Uniprot:Q2KMM2
Length = 145
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 55 MFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKI 114
M + + + S++SP G + +KLH Y+T TG+K ++ D + +L I
Sbjct: 41 MLFSIRSFVSKMSPLDMKDGFLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHI 100
Query: 115 YE-LYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
Y LY ++ +KNP L ++ ELF + L + ++
Sbjct: 101 YSALYVEFVVKNPLCPLGQTVQSELFRSRLDSYVR 135
>ZFIN|ZDB-GENE-040718-242 [details] [associations]
symbol:trappc1 "trafficking protein particle
complex 1" species:7955 "Danio rerio" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 ZFIN:ZDB-GENE-040718-242
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801 HOGENOM:HOG000172118
PANTHER:PTHR23249 CTD:58485 HOVERGEN:HBG056032 OrthoDB:EOG45HRZS
eggNOG:COG5122 EMBL:BC076411 IPI:IPI00511218 RefSeq:NP_001002742.1
UniGene:Dr.87380 ProteinModelPortal:Q6DGD9 SMR:Q6DGD9 STRING:Q6DGD9
DNASU:437015 GeneID:437015 KEGG:dre:437015 InParanoid:Q6DGD9
NextBio:20831430 Uniprot:Q6DGD9
Length = 145
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 55 MFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKI 114
M + + + S++SP G + + +KLH Y+T TG++ ++ D + L++I
Sbjct: 41 MLFSIRSFVSKMSPLDMKDGFLSFQTNRYKLHYYETPTGIRLVMNTDLSAPNCRETLQQI 100
Query: 115 YE-LYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
Y LY D +KNP L ++ ELF++ L + ++
Sbjct: 101 YSTLYVDLIVKNPLCVLGESLQSELFNSKLDSFIR 135
>UNIPROTKB|Q17QI1 [details] [associations]
symbol:TRAPPC1 "Trafficking protein particle complex
subunit 1" species:9913 "Bos taurus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0005783
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
GeneTree:ENSGT00510000047863 EMBL:BC118345 IPI:IPI00704726
RefSeq:NP_001069881.1 UniGene:Bt.22552 ProteinModelPortal:Q17QI1
SMR:Q17QI1 PRIDE:Q17QI1 Ensembl:ENSBTAT00000065281 GeneID:616205
KEGG:bta:616205 CTD:58485 HOVERGEN:HBG056032 OMA:FLYYKTN
OrthoDB:EOG45HRZS NextBio:20900014 Uniprot:Q17QI1
Length = 145
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 55 MFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKI 114
M + + + S++SP G + +KLH Y+T TG+K ++ D + +L I
Sbjct: 41 MLFSIRSFVSKMSPLDMKDGFLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHI 100
Query: 115 YE-LYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
Y LY + +KNP L ++ ELF + L + ++
Sbjct: 101 YSALYVELVVKNPLCPLGQTVQSELFRSRLDSYVR 135
>UNIPROTKB|E2RTE6 [details] [associations]
symbol:TRAPPC1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030008 "TRAPP complex" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
GeneTree:ENSGT00510000047863 CTD:58485 OMA:FLYYKTN
EMBL:AAEX03003637 RefSeq:XP_536628.2 ProteinModelPortal:E2RTE6
SMR:E2RTE6 PRIDE:E2RTE6 Ensembl:ENSCAFT00000026747 GeneID:479490
KEGG:cfa:479490 NextBio:20854667 Uniprot:E2RTE6
Length = 145
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 55 MFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKI 114
M + + + S++SP G + +KLH Y+T TG+K ++ D + +L I
Sbjct: 41 MLFSIRSFVSKMSPLDMKDGFLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHI 100
Query: 115 YE-LYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
Y LY + +KNP L ++ ELF + L + ++
Sbjct: 101 YSALYVELVVKNPLCPLGQTVQSELFRSRLDSYVR 135
>UNIPROTKB|Q9Y5R8 [details] [associations]
symbol:TRAPPC1 "Trafficking protein particle complex
subunit 1" species:9606 "Homo sapiens" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
GO:GO:0005783 EMBL:CH471108 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0030008 eggNOG:NOG237222 HOGENOM:HOG000172118
PANTHER:PTHR23249 CTD:58485 HOVERGEN:HBG056032 OMA:FLYYKTN
OrthoDB:EOG45HRZS EMBL:AF129332 EMBL:BC032717 IPI:IPI00009654
RefSeq:NP_001160093.1 RefSeq:NP_067033.1 UniGene:Hs.24379
ProteinModelPortal:Q9Y5R8 SMR:Q9Y5R8 DIP:DIP-48285N IntAct:Q9Y5R8
STRING:Q9Y5R8 PhosphoSite:Q9Y5R8 DMDM:20177848 PaxDb:Q9Y5R8
PRIDE:Q9Y5R8 DNASU:58485 Ensembl:ENST00000303731
Ensembl:ENST00000540486 GeneID:58485 KEGG:hsa:58485 UCSC:uc002gjo.2
GeneCards:GC17M007833 HGNC:HGNC:19894 MIM:610969 neXtProt:NX_Q9Y5R8
PharmGKB:PA134988492 InParanoid:Q9Y5R8 ChiTaRS:TRAPPC1
GenomeRNAi:58485 NextBio:64938 Bgee:Q9Y5R8 CleanEx:HS_TRAPPC1
Genevestigator:Q9Y5R8 GermOnline:ENSG00000170043 Uniprot:Q9Y5R8
Length = 145
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 55 MFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKI 114
M + + + S++SP G + +KLH Y+T TG+K ++ D + +L I
Sbjct: 41 MLFSIRSFVSKMSPLDMKDGFLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHI 100
Query: 115 YE-LYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
Y LY + +KNP L ++ ELF + L + ++
Sbjct: 101 YSALYVELVVKNPLCPLGQTVQSELFRSRLDSYVR 135
>UNIPROTKB|F2Z5M0 [details] [associations]
symbol:TRAPPC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030008 "TRAPP complex" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
GeneTree:ENSGT00510000047863 OMA:FLYYKTN EMBL:CU972380
RefSeq:XP_003132004.1 UniGene:Ssc.1819 ProteinModelPortal:F2Z5M0
SMR:F2Z5M0 PRIDE:F2Z5M0 Ensembl:ENSSSCT00000031070 GeneID:100524173
KEGG:ssc:100524173 Uniprot:F2Z5M0
Length = 145
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 55 MFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDTNQSGLDLILKKI 114
M + + + S++SP G + +KLH Y+T TG+K ++ D + +L I
Sbjct: 41 MLFSIRSFVSKMSPLDMKDGFLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHI 100
Query: 115 YE-LYADYALKNPFYSLEMPIRCELFDTHLQNLLQ 148
Y LY + +KNP L ++ ELF + L + ++
Sbjct: 101 YSALYVELVVKNPLCPLGQTVQSELFRSRLDSYVR 135
>ASPGD|ASPL0000070505 [details] [associations]
symbol:AN8828 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA] [GO:0017112
"Rab guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0006888
EMBL:BN001303 SUPFAM:SSF64356 GO:GO:0005801 eggNOG:NOG237222
HOGENOM:HOG000172118 OrthoDB:EOG4PZNH3 PANTHER:PTHR23249
OMA:NMVRKLG EMBL:AACD01000162 RefSeq:XP_682097.1
ProteinModelPortal:Q5ASA2 STRING:Q5ASA2
EnsemblFungi:CADANIAT00006229 GeneID:2868336 KEGG:ani:AN8828.2
Uniprot:Q5ASA2
Length = 167
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 83 FKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIY-ELYADYALKNPFYSLEMP----IRCE 137
+KLH Y+TLT +KF+++ D + + L++IY LY +Y +KNP E P + E
Sbjct: 93 YKLHYYETLTNIKFVMITDVKSPSMRVALQQIYINLYVEYVVKNPLSPTEHPGGVGVNNE 152
Query: 138 LFDTHLQNLL 147
LF+ L+ +
Sbjct: 153 LFEQSLEQFV 162
>FB|FBgn0260860 [details] [associations]
symbol:Bet5 species:7227 "Drosophila melanogaster"
[GO:0030008 "TRAPP complex" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 EMBL:AE014297 GO:GO:0016192 GO:GO:0006888
OrthoDB:EOG4HQC1M SUPFAM:SSF64356 GO:GO:0030008 eggNOG:NOG237222
PANTHER:PTHR23249 GeneTree:ENSGT00510000047863 OMA:FLYYKTN
EMBL:BT100282 RefSeq:NP_651778.1 UniGene:Dm.16301 SMR:Q9VA95
STRING:Q9VA95 EnsemblMetazoa:FBtr0085570 GeneID:43590
KEGG:dme:Dmel_CG1359 UCSC:CG1359-RA CTD:43590 FlyBase:FBgn0260860
InParanoid:Q9VA95 GenomeRNAi:43590 NextBio:834734 Uniprot:Q9VA95
Length = 145
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 26/116 (22%), Positives = 61/116 (52%)
Query: 44 MTTNEKIFLA-SMFYPLFAIASQLSPEPKSSGIEVLEADTFKLHCYQTLTGVKFMIVGDT 102
+T E+ L M + + + S++SP G + + + LH +T +G+KF++ DT
Sbjct: 29 ITREEEAKLTYGMLFSIKSFVSKISPHDPKEGFLYYKTNRYALHYLETPSGLKFVLNTDT 88
Query: 103 NQSGLDLILKKIY-ELYADYALKNPFYSLEMPIRCELFDTHLQNLLQQHEKTGVTN 157
+ +L+++Y +++ ++ +++P ++ + ELF + L ++Q G+ N
Sbjct: 89 TAINVKELLQQLYAKVWVEFVVRDPLWTPGTVVTSELFQSKLDEFVRQSPIFGIRN 144
>UNIPROTKB|Q5ZKP4 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9031 "Gallus gallus" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:AJ720040
EMBL:AADN02011353 IPI:IPI00570779 RefSeq:NP_001006263.1
UniGene:Gga.7014 STRING:Q5ZKP4 Ensembl:ENSGALT00000026761
GeneID:418634 KEGG:gga:418634 InParanoid:Q5ZKP4 NextBio:20821790
Uniprot:Q5ZKP4
Length = 140
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 94 VKFMIVGDTNQS-GLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNLLQQH 150
++F+++ D Q G+ +Y+LY +A+ NPFY L PIR F+ +Q L ++H
Sbjct: 81 MRFIMLHDVRQEDGIKNFFNDVYDLYIKFAM-NPFYELNSPIRSSAFERKVQFLGKKH 137
>UNIPROTKB|G4N7A5 [details] [associations]
symbol:MGG_06435 "Transporter particle subunit bet5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0005801 EMBL:CM001234 PANTHER:PTHR23249 RefSeq:XP_003717134.1
ProteinModelPortal:G4N7A5 EnsemblFungi:MGG_06435T0 GeneID:2684590
KEGG:mgr:MGG_06435 Uniprot:G4N7A5
Length = 162
Score = 101 (40.6 bits), Expect = 0.00030, P = 0.00030
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 83 FKLHCYQTLTGVKFMIVGDTNQSGLDLILKKIY-ELYADYALKNPFYSLEMP----IRCE 137
+KLH Y+T T ++F+++ DT + +L +IY L+ +Y +KNP +E ++ E
Sbjct: 89 YKLHFYETPTNLRFVLLTDTASMSMRNVLHQIYINLWVEYVVKNPLAPVEHKGGEGVKNE 148
Query: 138 LFDTHLQNLLQ 148
LF+ L ++
Sbjct: 149 LFELGLDQFIR 159
>ZFIN|ZDB-GENE-060929-1266 [details] [associations]
symbol:trappc2 "trafficking protein particle
complex 2" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 ZFIN:ZDB-GENE-060929-1266
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:BC124169 IPI:IPI00806101
RefSeq:NP_001070243.1 UniGene:Dr.16486 ProteinModelPortal:Q08CN0
SMR:Q08CN0 STRING:Q08CN0 Ensembl:ENSDART00000099693 GeneID:767808
KEGG:dre:767808 InParanoid:Q08CN0 NextBio:20918186
ArrayExpress:Q08CN0 Bgee:Q08CN0 Uniprot:Q08CN0
Length = 140
Score = 96 (38.9 bits), Expect = 0.00044, P = 0.00044
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 88 YQTLTGVKFMIVGDTNQS-GLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNL 146
+ T ++F+++ D Q G+ +Y+LY +A+ NPFY + PIR F+ +Q L
Sbjct: 75 FVTAGHMRFIMLHDVRQEDGIKNFFNDVYDLYVKFAM-NPFYEVNAPIRSTAFERKVQFL 133
Query: 147 LQQH 150
++H
Sbjct: 134 GKKH 137
>UNIPROTKB|Q3T0F2 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9913 "Bos taurus" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
EMBL:BC102418 IPI:IPI00696352 RefSeq:NP_001029968.1
UniGene:Bt.13900 ProteinModelPortal:Q3T0F2 SMR:Q3T0F2 STRING:Q3T0F2
PRIDE:Q3T0F2 Ensembl:ENSBTAT00000014509 GeneID:616748
KEGG:bta:616748 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 InParanoid:Q3T0F2
OrthoDB:EOG49GKHT NextBio:20900300 Uniprot:Q3T0F2
Length = 140
Score = 95 (38.5 bits), Expect = 0.00073, P = 0.00073
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 88 YQTLTGVKFMIVGDTNQS-GLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNL 146
+ T ++F+++ D Q G+ +Y+LY +A+ NPFY PIR FD +Q L
Sbjct: 75 FVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAM-NPFYEPNSPIRSSAFDRKVQFL 133
Query: 147 LQQH 150
++H
Sbjct: 134 GKKH 137
>UNIPROTKB|F1SRI0 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403
GeneTree:ENSGT00510000047168 EMBL:AY610478 EMBL:AK344004
EMBL:CU633939 RefSeq:NP_001231738.1 UniGene:Ssc.8205
ProteinModelPortal:F1SRI0 SMR:F1SRI0 PRIDE:F1SRI0
Ensembl:ENSSSCT00000033348 Ensembl:ENSSSCT00000034259
GeneID:100513447 KEGG:ssc:100513447 Uniprot:F1SRI0
Length = 140
Score = 95 (38.5 bits), Expect = 0.00073, P = 0.00073
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 88 YQTLTGVKFMIVGDTNQS-GLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNL 146
+ T ++F+++ D Q G+ +Y+LY +A+ NPFY PIR FD +Q L
Sbjct: 75 FVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAM-NPFYEPNSPIRSSAFDRKVQFL 133
Query: 147 LQQH 150
++H
Sbjct: 134 GKKH 137
>RGD|1306925 [details] [associations]
symbol:Trappc2 "trafficking protein particle complex 2"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0030008 "TRAPP
complex" evidence=ISO] [GO:0044325 "ion channel binding"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
RGD:1306925 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 CTD:6399
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 OrthoDB:EOG49GKHT
EMBL:CH474014 EMBL:BC091429 IPI:IPI00212787 RefSeq:NP_001020136.1
UniGene:Rn.8274 SMR:Q5BJL8 STRING:Q5BJL8 Ensembl:ENSRNOT00000068113
GeneID:501550 KEGG:rno:501550 UCSC:RGD:1306925 InParanoid:Q5BJL8
NextBio:709167 Genevestigator:Q5BJL8 Uniprot:Q5BJL8
Length = 140
Score = 95 (38.5 bits), Expect = 0.00073, P = 0.00073
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 88 YQTLTGVKFMIVGDTNQS-GLDLILKKIYELYADYALKNPFYSLEMPIRCELFDTHLQNL 146
+ T ++F+++ D Q G+ +Y+LY +A+ NPFY PIR FD +Q L
Sbjct: 75 FVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAM-NPFYEPNSPIRSSAFDRKVQFL 133
Query: 147 LQQH 150
++H
Sbjct: 134 GKKH 137
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 164 164 0.00088 107 3 11 22 0.37 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 563 (60 KB)
Total size of DFA: 137 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.01u 0.11s 15.12t Elapsed: 00:00:01
Total cpu time: 15.01u 0.11s 15.12t Elapsed: 00:00:01
Start: Thu Aug 15 15:55:15 2013 End: Thu Aug 15 15:55:16 2013