BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1670
         (68 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P36188|TNNI_DROME Troponin I OS=Drosophila melanogaster GN=wupA PE=2 SV=3
          Length = 269

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/63 (95%), Positives = 62/63 (98%)

Query: 6   AKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQER 65
           AKKAKQAEI+RKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQER
Sbjct: 67  AKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQER 126

Query: 66  KVS 68
           K +
Sbjct: 127 KAA 129


>sp|O44572|TNNI4_CAEEL Troponin I 4 OS=Caenorhabditis elegans GN=tni-4 PE=2 SV=2
          Length = 194

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MAD-DAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEEL 59
          M+D DA +  K AE +RK+ EVRKR+EEAS+ KKAKKGF+TPERKKKLR LL  KAAE+L
Sbjct: 1  MSDVDADEARKMAERERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDL 60

Query: 60 KKEQ 63
          K++Q
Sbjct: 61 KQQQ 64


>sp|Q20334|TNNI1_CAEEL Troponin I 1 OS=Caenorhabditis elegans GN=tni-1 PE=2 SV=1
          Length = 250

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 3/65 (4%)

Query: 2  ADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKK 61
           +DA +KA++ E   K+AEVRKR+EEA + KK KKGF+TPERKKKLR LL  KAAE+LK 
Sbjct: 19 GEDAQRKAQEREA--KKAEVRKRLEEAGQ-KKQKKGFLTPERKKKLRKLLMNKAAEDLKT 75

Query: 62 EQERK 66
          +Q RK
Sbjct: 76 QQLRK 80


>sp|Q9XUN9|TNNI3_CAEEL Troponin I 3 OS=Caenorhabditis elegans GN=tni-3 PE=2 SV=1
          Length = 260

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 51/61 (83%), Gaps = 2/61 (3%)

Query: 3  DDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKE 62
          DDAA+KA++ E+  K+AEVRKRMEEA+K    KKGF+TPERKKKLR LL  KAAE+LK++
Sbjct: 19 DDAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQ 76

Query: 63 Q 63
          Q
Sbjct: 77 Q 77


>sp|Q9GYF1|TNNI2_CAEEL Troponin I 2 OS=Caenorhabditis elegans GN=unc-27 PE=2 SV=2
          Length = 242

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 2/62 (3%)

Query: 2  ADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKK 61
           +DA +KA  AE + K+AEVRKR+EEA   KKAKKGF+TPERKKKLR LL  KAAE+LK+
Sbjct: 6  GEDAQRKA--AEREAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKR 63

Query: 62 EQ 63
          +Q
Sbjct: 64 QQ 65


>sp|P05547|TNNI_PONLE Troponin I OS=Pontastacus leptodactylus PE=1 SV=1
          Length = 201

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 51/58 (87%), Gaps = 1/58 (1%)

Query: 11 QAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKVS 68
          Q +IDRK+AEVRKR+EE S  KK KKGFMTPERKKKLRLLLRKKAAEELKKEQERK  
Sbjct: 14 QDDIDRKKAEVRKRLEEQS-LKKQKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAG 70


>sp|P22711|TIN_DROME Muscle-specific homeobox protein tinman OS=Drosophila melanogaster
           GN=tin PE=2 SV=2
          Length = 416

 Score = 30.0 bits (66), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 2   ADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEEL 59
           +D+ AKK   +++   R+E+RK     +    +  G   P  K+K R+L  +    EL
Sbjct: 259 SDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLEL 316


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.307    0.120    0.291 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,455,869
Number of Sequences: 539616
Number of extensions: 634305
Number of successful extensions: 10480
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 8035
Number of HSP's gapped (non-prelim): 2299
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)