BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy1670
MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK
KEQERKVS

High Scoring Gene Products

Symbol, full name Information P value
wupA
wings up A 		protein from Drosophila melanogaster 5.8e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy1670
        (68 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0004028 - symbol:wupA "wings up A" species:7227 "D...   101  5.8e-05   1


>FB|FBgn0004028 [details] [associations]
            symbol:wupA "wings up A" species:7227 "Drosophila
            melanogaster" [GO:0046716 "muscle cell homeostasis" evidence=IMP]
            [GO:0007399 "nervous system development" evidence=NAS;IMP]
            [GO:0007517 "muscle organ development" evidence=NAS;IMP]
            [GO:0007519 "skeletal muscle tissue development" evidence=IMP]
            [GO:0005861 "troponin complex" evidence=IEA;NAS] [GO:0003779 "actin
            binding" evidence=NAS] [GO:0005523 "tropomyosin binding"
            evidence=NAS] [GO:0045214 "sarcomere organization" evidence=IMP]
            [GO:0030239 "myofibril assembly" evidence=IMP] [GO:0048738 "cardiac
            muscle tissue development" evidence=IMP] [GO:0007507 "heart
            development" evidence=IMP] [GO:0000280 "nuclear division"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001978 Pfam:PF00992 GO:GO:0003779 GO:GO:0007399
            EMBL:AE014298 GO:GO:0048738 GO:GO:0046716 GO:GO:0045214
            GO:GO:0007519 GO:GO:0000280 GO:GO:0005861
            GeneTree:ENSGT00390000002746 eggNOG:NOG270363 OMA:INQLTIQ
            EMBL:X58188 EMBL:X59376 EMBL:AY122145 PIR:A38594 PIR:A40547
            PIR:A48147 PIR:B38594 PIR:B48147 PIR:C48147 PIR:D48147
            RefSeq:NP_001245733.1 RefSeq:NP_001245734.1 RefSeq:NP_523398.1
            RefSeq:NP_728137.1 RefSeq:NP_728138.1 RefSeq:NP_728139.1
            RefSeq:NP_728140.1 RefSeq:NP_728141.1 RefSeq:NP_728142.1
            UniGene:Dm.1717 ProteinModelPortal:P36188 SMR:P36188 DIP:DIP-22750N
            IntAct:P36188 MINT:MINT-314048 STRING:P36188 PaxDb:P36188
            EnsemblMetazoa:FBtr0074524 GeneID:32794 KEGG:dme:Dmel_CG7178
            CTD:32794 FlyBase:FBgn0004028 InParanoid:P36188 OrthoDB:EOG4ZGMVZ
            PhylomeDB:P36188 ChiTaRS:wupA GenomeRNAi:32794 NextBio:780416
            Bgee:P36188 GermOnline:CG7178 Uniprot:P36188
        Length = 269

 Score = 101 (40.6 bits), Expect = 5.8e-05, P = 5.8e-05
 Identities = 21/29 (72%), Positives = 22/29 (75%)

Query:    13 EIDRKRAEVRKRMEEASXXXXXXXGFMTP 41
             EI+RKRAEVRKRMEEAS       GFMTP
Sbjct:    74 EIERKRAEVRKRMEEASKAKKAKKGFMTP 102


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.127   0.331    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       68        25   0.00091  102 3  10 22  0.45    21
                                                     29  0.44    22


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  270 (29 KB)
  Total size of DFA:  41 KB (2055 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.89u 0.09s 7.98t   Elapsed:  00:00:01
  Total cpu time:  7.89u 0.09s 7.98t   Elapsed:  00:00:01
  Start:  Thu Aug 15 16:11:47 2013   End:  Thu Aug 15 16:11:48 2013

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