Query psy16704
Match_columns 146
No_of_seqs 110 out of 219
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 19:54:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16704.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16704hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qqe_A Vesicular transport pro 99.8 7E-19 2.4E-23 138.2 9.9 116 31-146 175-292 (292)
2 2ifu_A Gamma-SNAP; membrane fu 99.5 7.7E-14 2.6E-18 110.1 9.5 103 31-136 172-275 (307)
3 3lpz_A GET4 (YOR164C homolog); 95.7 0.023 7.8E-07 48.5 6.9 84 54-138 186-291 (336)
4 2wpv_A GET4, UPF0363 protein Y 94.8 0.046 1.6E-06 45.9 5.8 80 56-138 189-287 (312)
5 2kc7_A BFR218_protein; tetratr 93.7 0.33 1.1E-05 30.4 7.0 74 31-125 17-91 (99)
6 2yhc_A BAMD, UPF0169 lipoprote 91.6 1.3 4.3E-05 32.5 8.7 93 30-126 20-127 (225)
7 3upv_A Heat shock protein STI1 88.1 3.8 0.00013 26.5 8.3 81 31-125 21-102 (126)
8 2l6j_A TPR repeat-containing p 87.4 0.95 3.2E-05 28.2 4.5 51 31-88 21-72 (111)
9 3qky_A Outer membrane assembly 86.7 2.7 9.3E-05 30.9 7.3 89 31-125 32-127 (261)
10 3qky_A Outer membrane assembly 84.6 5.8 0.0002 29.0 8.3 96 28-126 111-226 (261)
11 2kat_A Uncharacterized protein 83.7 2.8 9.7E-05 26.9 5.6 67 31-104 36-103 (115)
12 1hxi_A PEX5, peroxisome target 83.6 3.9 0.00013 27.3 6.4 82 31-126 34-116 (121)
13 4gco_A Protein STI-1; structur 82.0 8.4 0.00029 25.9 7.7 93 31-137 30-123 (126)
14 3upv_A Heat shock protein STI1 81.3 3.3 0.00011 26.8 5.2 65 31-102 55-120 (126)
15 3sz7_A HSC70 cochaperone (SGT) 81.1 11 0.00036 25.7 8.6 95 31-139 28-128 (164)
16 2xev_A YBGF; tetratricopeptide 80.2 6.5 0.00022 25.0 6.3 102 31-137 19-121 (129)
17 3txn_A 26S proteasome regulato 79.9 21 0.00071 30.5 11.1 71 55-128 220-291 (394)
18 2vgx_A Chaperone SYCD; alterna 79.6 7.7 0.00026 26.8 7.0 53 31-90 38-91 (148)
19 2xcb_A PCRH, regulatory protei 78.8 9.1 0.00031 25.6 7.0 53 31-90 35-88 (142)
20 2xev_A YBGF; tetratricopeptide 78.8 10 0.00034 24.1 12.2 55 31-89 56-111 (129)
21 1pc2_A Mitochondria fission pr 78.5 12 0.00042 28.2 8.2 65 31-103 52-117 (152)
22 3sz7_A HSC70 cochaperone (SGT) 76.7 15 0.00051 24.9 7.8 54 31-91 62-116 (164)
23 4i17_A Hypothetical protein; T 74.3 9 0.00031 27.2 6.2 56 31-86 93-149 (228)
24 3ma5_A Tetratricopeptide repea 72.7 11 0.00037 24.0 5.8 64 31-101 24-88 (100)
25 2xcb_A PCRH, regulatory protei 71.8 17 0.00059 24.2 6.9 53 31-90 69-122 (142)
26 4gco_A Protein STI-1; structur 71.5 9.7 0.00033 25.6 5.6 56 30-92 63-119 (126)
27 3t9o_A DGC, diguanylate cyclas 71.4 4 0.00014 29.7 3.8 37 94-132 85-126 (135)
28 1tzv_A NUSB protein, N utiliza 71.3 5.7 0.00019 28.8 4.6 68 37-104 61-131 (142)
29 2lni_A Stress-induced-phosphop 70.9 15 0.00051 22.9 6.1 80 31-125 33-114 (133)
30 2if4_A ATFKBP42; FKBP-like, al 69.9 20 0.00069 28.3 7.9 90 31-127 196-296 (338)
31 3uq3_A Heat shock protein STI1 69.4 6.9 0.00024 27.4 4.6 83 31-123 22-107 (258)
32 3q49_B STIP1 homology and U bo 69.0 20 0.00067 22.9 7.2 51 31-88 26-77 (137)
33 3gyz_A Chaperone protein IPGC; 68.7 21 0.00072 25.3 7.1 52 31-89 53-105 (151)
34 1elr_A TPR2A-domain of HOP; HO 68.0 18 0.00063 22.2 8.6 56 31-86 55-111 (131)
35 3rkv_A Putative peptidylprolyl 67.2 17 0.00058 24.5 6.1 70 31-107 80-152 (162)
36 3uq3_A Heat shock protein STI1 66.8 29 0.001 24.1 8.8 81 31-125 156-237 (258)
37 2vgx_A Chaperone SYCD; alterna 66.8 9.6 0.00033 26.3 4.8 51 31-88 72-123 (148)
38 1na3_A Designed protein CTPR2; 65.5 18 0.00062 21.2 5.9 52 31-89 26-78 (91)
39 2pl2_A Hypothetical conserved 64.6 19 0.00064 26.0 6.2 51 31-89 135-186 (217)
40 3r2d_A Protein NUSB, N utiliza 62.9 11 0.00036 27.8 4.6 68 37-104 62-132 (149)
41 2pl2_A Hypothetical conserved 62.8 24 0.00082 25.4 6.5 87 31-126 22-115 (217)
42 4gcn_A Protein STI-1; structur 62.4 26 0.00088 23.3 6.2 81 31-120 25-108 (127)
43 2ifu_A Gamma-SNAP; membrane fu 61.2 33 0.0011 26.1 7.4 86 31-120 53-140 (307)
44 2fbn_A 70 kDa peptidylprolyl i 60.4 37 0.0013 23.6 7.0 86 31-126 55-153 (198)
45 4i17_A Hypothetical protein; T 59.9 42 0.0014 23.6 7.7 88 31-127 59-149 (228)
46 1a17_A Serine/threonine protei 59.9 32 0.0011 22.3 8.5 53 31-90 64-117 (166)
47 1hh8_A P67PHOX, NCF-2, neutrop 59.5 40 0.0014 23.2 7.5 60 31-90 88-157 (213)
48 2kck_A TPR repeat; tetratricop 59.4 26 0.00087 20.9 6.9 49 31-86 23-72 (112)
49 3ieg_A DNAJ homolog subfamily 57.3 53 0.0018 23.9 8.3 82 31-126 20-102 (359)
50 3k9i_A BH0479 protein; putativ 56.3 21 0.00072 22.9 4.8 50 31-87 44-94 (117)
51 3urz_A Uncharacterized protein 56.2 14 0.00048 26.5 4.2 31 58-88 91-122 (208)
52 1kt0_A FKBP51, 51 kDa FK506-bi 55.9 69 0.0023 26.4 8.9 89 31-126 285-382 (457)
53 3gyz_A Chaperone protein IPGC; 55.5 26 0.0009 24.7 5.6 63 31-103 87-150 (151)
54 4abn_A Tetratricopeptide repea 55.2 84 0.0029 25.8 9.4 81 30-121 237-318 (474)
55 2vyi_A SGTA protein; chaperone 55.0 33 0.0011 20.9 5.9 50 31-87 29-79 (131)
56 3u4t_A TPR repeat-containing p 54.7 29 0.00098 24.7 5.7 61 33-93 198-260 (272)
57 3fp2_A TPR repeat-containing p 54.4 45 0.0015 26.3 7.2 59 30-88 394-462 (537)
58 2y4t_A DNAJ homolog subfamily 54.3 68 0.0023 24.6 8.2 82 31-126 43-125 (450)
59 2c2l_A CHIP, carboxy terminus 53.8 45 0.0015 25.3 7.0 82 31-126 21-103 (281)
60 2hh6_A BH3980 protein; 1017660 53.7 61 0.0021 23.5 7.3 72 65-137 27-112 (113)
61 2o4t_A BH3976 protein; LEFT-ha 53.4 13 0.00044 26.6 3.5 71 69-140 13-96 (100)
62 1na0_A Designed protein CTPR3; 52.5 36 0.0012 20.5 5.6 50 31-87 26-76 (125)
63 1hxi_A PEX5, peroxisome target 50.1 31 0.001 22.7 4.9 51 31-88 68-119 (121)
64 1eyv_A NUSB protein, N-utilizi 49.6 25 0.00086 26.0 4.8 49 57-105 91-140 (156)
65 2lni_A Stress-induced-phosphop 49.4 40 0.0014 20.8 5.2 51 31-88 67-118 (133)
66 3qou_A Protein YBBN; thioredox 49.4 82 0.0028 23.8 8.2 52 56-107 220-272 (287)
67 3u4t_A TPR repeat-containing p 49.1 62 0.0021 22.9 6.7 18 69-86 123-140 (272)
68 2fbn_A 70 kDa peptidylprolyl i 48.4 65 0.0022 22.3 7.2 53 31-90 105-158 (198)
69 1p5q_A FKBP52, FK506-binding p 47.9 92 0.0031 24.3 8.1 53 31-90 213-266 (336)
70 3k9i_A BH0479 protein; putativ 47.3 34 0.0012 21.8 4.7 53 32-88 8-61 (117)
71 3ieg_A DNAJ homolog subfamily 47.2 50 0.0017 24.0 6.1 102 30-139 250-353 (359)
72 3urz_A Uncharacterized protein 45.3 79 0.0027 22.4 7.8 18 109-126 171-188 (208)
73 1elr_A TPR2A-domain of HOP; HO 44.5 52 0.0018 20.0 9.6 99 31-139 21-125 (131)
74 2vsy_A XCC0866; transferase, g 44.1 60 0.0021 26.9 6.8 51 31-88 74-125 (568)
75 2qfc_A PLCR protein; TPR, HTH, 43.9 54 0.0019 24.5 6.0 74 31-105 213-288 (293)
76 2q7f_A YRRB protein; TPR, prot 43.6 59 0.002 22.4 5.7 51 31-88 142-193 (243)
77 1kt0_A FKBP51, 51 kDa FK506-bi 43.3 95 0.0033 25.5 7.8 54 31-91 334-388 (457)
78 3ma5_A Tetratricopeptide repea 43.0 45 0.0015 20.9 4.7 63 56-125 8-71 (100)
79 3d3b_A Protein NUSB, N utiliza 42.9 34 0.0012 24.5 4.5 49 56-104 84-133 (141)
80 2r5s_A Uncharacterized protein 42.6 78 0.0027 21.6 9.8 64 33-103 93-157 (176)
81 4gcn_A Protein STI-1; structur 42.5 70 0.0024 21.0 6.3 56 31-86 59-115 (127)
82 3hym_B Cell division cycle pro 42.3 93 0.0032 22.4 7.0 72 31-112 253-325 (330)
83 4ga2_A E3 SUMO-protein ligase 41.8 54 0.0018 22.2 5.2 53 31-90 48-101 (150)
84 3rkv_A Putative peptidylprolyl 41.7 76 0.0026 21.1 8.5 102 31-139 28-145 (162)
85 3mv2_B Coatomer subunit epsilo 41.4 30 0.001 28.6 4.4 61 31-99 195-261 (310)
86 2kat_A Uncharacterized protein 41.3 64 0.0022 20.2 6.5 52 32-90 3-55 (115)
87 3t5x_A PCI domain-containing p 41.0 20 0.00068 27.5 3.1 75 32-120 32-107 (203)
88 2vyi_A SGTA protein; chaperone 40.9 59 0.002 19.7 7.6 51 31-88 63-114 (131)
89 2gw1_A Mitochondrial precursor 40.5 1.1E+02 0.0039 23.7 7.5 58 30-94 431-489 (514)
90 4ga2_A E3 SUMO-protein ligase 40.5 41 0.0014 22.8 4.4 81 32-126 15-96 (150)
91 3hym_B Cell division cycle pro 39.9 1E+02 0.0035 22.1 8.1 89 31-126 210-301 (330)
92 1p5q_A FKBP52, FK506-binding p 39.9 1.2E+02 0.0042 23.6 7.7 89 31-126 164-261 (336)
93 1a17_A Serine/threonine protei 39.1 76 0.0026 20.4 7.6 51 31-88 30-81 (166)
94 3vtx_A MAMA; tetratricopeptide 38.7 59 0.002 21.8 5.0 54 31-91 90-144 (184)
95 4b4t_R RPN7, 26S proteasome re 38.3 67 0.0023 26.8 6.2 93 32-126 226-320 (429)
96 4eqf_A PEX5-related protein; a 37.2 1.3E+02 0.0044 22.5 7.8 81 31-126 82-164 (365)
97 4abn_A Tetratricopeptide repea 36.9 79 0.0027 26.0 6.4 83 31-126 120-210 (474)
98 1wao_1 Serine/threonine protei 35.5 1.4E+02 0.0048 24.8 7.8 51 31-88 23-74 (477)
99 3mkr_A Coatomer subunit epsilo 35.4 1E+02 0.0034 23.5 6.4 60 62-126 137-197 (291)
100 2y4t_A DNAJ homolog subfamily 34.8 1.1E+02 0.0036 23.6 6.4 51 31-88 77-128 (450)
101 2dba_A Smooth muscle cell asso 34.5 86 0.0029 19.7 10.2 53 31-87 45-98 (148)
102 3q49_B STIP1 homology and U bo 34.5 86 0.0029 19.7 5.2 50 31-87 60-110 (137)
103 3f7x_A Putative polyketide cyc 34.4 18 0.00063 25.5 1.8 32 85-116 15-46 (151)
104 3t5v_B Nuclear mRNA export pro 33.8 90 0.0031 27.1 6.5 24 97-120 300-323 (455)
105 2yhc_A BAMD, UPF0169 lipoprote 33.4 1.2E+02 0.0041 21.6 6.2 32 62-93 154-186 (225)
106 2hr2_A Hypothetical protein; a 33.2 88 0.003 23.3 5.6 88 31-126 28-133 (159)
107 1fch_A Peroxisomal targeting s 32.5 84 0.0029 23.3 5.3 54 31-91 115-169 (368)
108 2kck_A TPR repeat; tetratricop 32.4 78 0.0027 18.6 5.6 54 31-88 57-111 (112)
109 2f86_B Hypothetical protein K1 30.8 38 0.0013 24.3 3.1 22 94-115 16-37 (143)
110 3mv2_B Coatomer subunit epsilo 28.8 63 0.0021 26.6 4.4 76 55-132 136-216 (310)
111 1qqe_A Vesicular transport pro 28.6 1.8E+02 0.0062 21.6 9.8 91 32-126 136-230 (292)
112 3as5_A MAMA; tetratricopeptide 28.6 1.2E+02 0.004 19.5 7.6 50 31-87 59-109 (186)
113 4b4t_Q 26S proteasome regulato 28.4 2E+02 0.0068 22.0 7.6 97 31-128 152-256 (434)
114 1wao_1 Serine/threonine protei 28.2 1.2E+02 0.004 25.3 6.0 77 31-119 57-134 (477)
115 3fp2_A TPR repeat-containing p 27.6 89 0.003 24.6 4.9 56 31-86 219-275 (537)
116 2asr_A Aspartate receptor; che 27.1 1.4E+02 0.0048 19.9 5.7 44 69-113 59-114 (142)
117 2fo7_A Synthetic consensus TPR 26.6 1.1E+02 0.0037 18.3 6.0 52 31-89 52-104 (136)
118 2w3l_A BCL2-XL, apoptosis regu 26.2 68 0.0023 23.2 3.8 54 65-119 5-58 (144)
119 1hh8_A P67PHOX, NCF-2, neutrop 26.2 1.6E+02 0.0053 20.0 8.0 51 31-88 54-105 (213)
120 3do9_A UPF0302 protein BA_1542 25.9 71 0.0024 24.8 4.0 32 89-120 148-179 (188)
121 3sxm_A Transcriptional regulat 25.8 56 0.0019 22.0 3.1 65 52-118 55-125 (140)
122 4eqf_A PEX5-related protein; a 25.4 2.1E+02 0.0072 21.3 6.7 51 31-88 230-281 (365)
123 2l6j_A TPR repeat-containing p 25.3 1.1E+02 0.0039 18.2 6.1 62 58-126 7-69 (111)
124 3gon_A Phosphomevalonate kinas 24.8 73 0.0025 24.6 3.9 48 71-118 211-258 (335)
125 1ihg_A Cyclophilin 40; ppiase 24.7 2.7E+02 0.0091 22.2 7.9 89 31-126 240-338 (370)
126 3qk9_A Mitochondrial import in 24.4 31 0.001 27.5 1.7 41 72-112 60-105 (222)
127 1zpy_A Hypothetical protein NE 24.3 65 0.0022 22.8 3.2 49 29-87 29-78 (95)
128 3gw4_A Uncharacterized protein 24.1 1.6E+02 0.0056 19.5 7.1 71 31-102 43-116 (203)
129 3ro2_A PINS homolog, G-protein 23.8 1.9E+02 0.0066 20.3 6.0 80 31-110 240-321 (338)
130 3mkr_A Coatomer subunit epsilo 23.6 2.4E+02 0.0082 21.3 9.9 54 30-90 182-236 (291)
131 3k6c_A Uncharacterized protein 23.6 68 0.0023 22.8 3.2 50 29-88 29-79 (95)
132 1ihg_A Cyclophilin 40; ppiase 23.5 2.3E+02 0.008 22.6 6.9 51 31-88 290-341 (370)
133 2pm7_A Protein WEB1, protein t 23.1 57 0.002 27.8 3.2 46 23-73 233-280 (399)
134 2pm7_A Protein WEB1, protein t 22.9 2.5E+02 0.0085 23.8 7.2 81 37-138 159-240 (399)
135 3qou_A Protein YBBN; thioredox 22.8 1.2E+02 0.0041 22.8 4.7 48 31-85 134-182 (287)
136 2gw1_A Mitochondrial precursor 22.7 2.7E+02 0.0091 21.5 8.0 87 31-126 389-480 (514)
137 2if4_A ATFKBP42; FKBP-like, al 22.6 1.1E+02 0.0038 23.9 4.7 54 31-91 247-301 (338)
138 1fch_A Peroxisomal targeting s 22.6 2.3E+02 0.008 20.8 7.3 53 30-87 197-250 (368)
139 1ecm_A Endo-oxabicyclic transi 22.1 82 0.0028 21.6 3.4 32 84-115 44-76 (109)
140 4gyw_A UDP-N-acetylglucosamine 22.0 2.2E+02 0.0076 25.6 7.0 52 31-89 60-112 (723)
141 1vls_A TAR, aspartate receptor 21.7 1.9E+02 0.0063 19.3 5.8 44 69-113 62-117 (146)
142 2vgq_A Maltose-binding peripla 21.6 63 0.0021 26.8 3.1 61 79-141 392-466 (477)
143 3ihu_A Transcriptional regulat 21.4 2E+02 0.0068 21.3 5.7 71 47-118 132-208 (222)
144 2d8d_A Aroag, phospho-2-dehydr 20.8 63 0.0022 21.4 2.5 33 84-116 42-74 (90)
145 2q12_A DIP13 alpha, DCC-intera 20.8 2.9E+02 0.0098 21.2 6.9 23 58-80 18-40 (265)
146 1col_A Colicin A; antibacteria 20.2 2E+02 0.0068 23.0 5.6 67 69-140 55-126 (204)
147 4b4t_S RPN3, 26S proteasome re 20.1 3.4E+02 0.012 24.2 7.7 29 97-125 346-374 (523)
No 1
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.78 E-value=7e-19 Score=138.17 Aligned_cols=116 Identities=39% Similarity=0.624 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|++.|+++.....+++..+|++++++++.|+|++.. |...|...++++.+++|+|.+++|++++.++.++++.+|.+
T Consensus 175 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~ 254 (292)
T 1qqe_A 175 IEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSE 254 (292)
T ss_dssp HHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHH
Confidence 58999999999999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCchHHHHHHHHHHHhhcCCC-CCCC
Q psy16704 110 AFSETVKEFDSISRLDQWYTTMLLKIKRQISTN-EDLR 146 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD~WKT~mLLkIKk~I~~~-~dl~ 146 (146)
.|.+++..|+++.++|+|+++++++||+.++++ +||+
T Consensus 255 ~~~~A~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~ 292 (292)
T 1qqe_A 255 QLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDLL 292 (292)
T ss_dssp THHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHhccCCccHHHHHHHHHHHHHHhhccccccC
Confidence 999999999999999999999999999999764 6775
No 2
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.50 E-value=7.7e-14 Score=110.12 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|++.|++....+-+++. +++...+++..|+|+++. |...|...++++. ++|+|.++||++++..++++++++|.+
T Consensus 172 ~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~~e~~~l~~l~~~~~~~d~~ 249 (307)
T 2ifu_A 172 DEAAASLQKEKSMYKEMEN-YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGSEDCAALEDLLQAYDEQDEE 249 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTSHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHcCC-hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHHHHhcCHH
Confidence 5899999999998888875 788889999999999998 9999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCchHHHHHHHHHHH
Q psy16704 110 AFSETVKEFDSISRLDQWYTTMLLKIK 136 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD~WKT~mLLkIK 136 (146)
.|.+ +.+||++++||+|+++++.+++
T Consensus 250 ~~~~-~~~~~~~~~ld~~~~~~~~~l~ 275 (307)
T 2ifu_A 250 QLLR-VCRSPLVTYMDNDYAKLAISLK 275 (307)
T ss_dssp HHHH-HTTSHHHHTSCHHHHHHHHTCC
T ss_pred HHHH-HHhCchhhhhhHHHHHHHHhCC
Confidence 9999 8889999999999999998765
No 3
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=95.70 E-value=0.023 Score=48.54 Aligned_cols=84 Identities=18% Similarity=0.239 Sum_probs=68.9
Q ss_pred hhHHhHHhHHHHHhc-chhHHHHHHhHHHhc----CCC---------------CccchHHHHHHHHHHHHhhcCHHHHHH
Q psy16704 54 SKEYFFKAGLCHLCI-DLLNCQQALSRYIDL----SPA---------------FQDTREYKFLLKLIESLEEEDSDAFSE 113 (146)
Q Consensus 54 aKeyffkA~LC~L~~-D~v~a~~ale~Y~~~----DPs---------------F~~SRE~klL~~LieAve~~D~e~Ft~ 113 (146)
+--|..+|.|++||. +...|+.+++.|.+. .|. |.++.=-.|+.=|+.+|+.++.+.|..
T Consensus 186 ~dlfiaRaVL~yL~l~n~~~A~~~~~~f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLLNFl~lLllt~q~~~~~lF~~ 265 (336)
T 3lpz_A 186 APLYCARAVLPYLLVANVRAANTAYRIFTSALVEDNKGLTVQNIGSQSAELRIFPSLPLLNFISMLLLSVQKGSPDLFRQ 265 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCTTSCCEESCC--CCCEECTTCHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhcCCCccccccccCCcccccCCCCchHHHHHHHHHHHhcCCHHHHHH
Confidence 445789999999999 999999999888753 354 566777889999999999999999999
Q ss_pred HHHhhhccCCchH--HHHHHHHHHHhh
Q psy16704 114 TVKEFDSISRLDQ--WYTTMLLKIKRQ 138 (146)
Q Consensus 114 aV~eYD~isrLD~--WKT~mLLkIKk~ 138 (146)
-+..|...-+-|+ |.. -|.+|-+.
T Consensus 266 L~~~Y~~~l~rd~~~~~~-~L~~IG~~ 291 (336)
T 3lpz_A 266 LKSKYEANLNELNGIWDT-ALELIAEM 291 (336)
T ss_dssp HHHHTHHHHHTTTTTTHH-HHHHHHHH
T ss_pred HHHHHHHHHHhcHHHHHH-HHHHHHHH
Confidence 9999998766664 754 56666553
No 4
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=94.76 E-value=0.046 Score=45.95 Aligned_cols=80 Identities=16% Similarity=0.292 Sum_probs=66.5
Q ss_pred HHhHHhHHHHHhc-chhHHHHHHhHHHhc-----------------C-CCCccchHHHHHHHHHHHHhhcCHHHHHHHHH
Q psy16704 56 EYFFKAGLCHLCI-DLLNCQQALSRYIDL-----------------S-PAFQDTREYKFLLKLIESLEEEDSDAFSETVK 116 (146)
Q Consensus 56 eyffkA~LC~L~~-D~v~a~~ale~Y~~~-----------------D-PsF~~SRE~klL~~LieAve~~D~e~Ft~aV~ 116 (146)
-|..+|.|++||. +...|+.+++.|.+. | |-|+++.--.|+.=|+.+|+.++.+.|...+.
T Consensus 189 lf~~RaVL~yL~l~n~~~A~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~pllnF~~lLl~t~e~~~~~lF~~L~~ 268 (312)
T 2wpv_A 189 EFFSRLVFNYLFISNISFAHESKDIFLERFIEKFHPKYEKIDKNGYEIVFFEDYSDLNFLQLLLITCQTKDKSYFLNLKN 268 (312)
T ss_dssp HHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHCCCEEEEEETTEEEEEESSCHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCccHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 3679999999999 999999999999643 2 22577899999999999999999999999999
Q ss_pred hhhccCCchHHHHHHHHHHHhh
Q psy16704 117 EFDSISRLDQWYTTMLLKIKRQ 138 (146)
Q Consensus 117 eYD~isrLD~WKT~mLLkIKk~ 138 (146)
.|...-+ .| ...|.+|-+.
T Consensus 269 ~Y~~~L~--~~-~~~L~~Ig~~ 287 (312)
T 2wpv_A 269 HYLDFSQ--AY-KSELEFLGQE 287 (312)
T ss_dssp HCHHHHH--HT-HHHHHHHHHH
T ss_pred HHHHHHH--HH-HHHHHHHHHH
Confidence 9998854 55 4556666654
No 5
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=93.68 E-value=0.33 Score=30.40 Aligned_cols=74 Identities=8% Similarity=0.014 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|++..+..-++ ....++.-|.|+... +...|...+++..+.+|......-. .
T Consensus 17 ~~A~~~~~~al~~~p~~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~---------------~ 75 (99)
T 2kc7_A 17 ENALQALEEFLQTEPVG------KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR---------------K 75 (99)
T ss_dssp HHHHHHHHHHHHHCSST------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH---------------H
T ss_pred HHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH---------------H
Confidence 47888998887754333 222566667788777 9999999999999999998766533 4
Q ss_pred HHHHHHHhhhccCCch
Q psy16704 110 AFSETVKEFDSISRLD 125 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD 125 (146)
.+.+++..|.+..+++
T Consensus 76 ~~~~a~~~~~~~~~~~ 91 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQ 91 (99)
T ss_dssp HHHHHHHHHCCTTHHH
T ss_pred HHHHHHHHHHHHhccC
Confidence 5555666666655544
No 6
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=91.64 E-value=1.3 Score=32.45 Aligned_cols=93 Identities=14% Similarity=0.112 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHH-----
Q psy16704 30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESL----- 103 (146)
Q Consensus 30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAv----- 103 (146)
-.+|++.|+++.+..-+++. +.+-++.-|.|+.-. |...|...++++.+.+|.-....+..+..+.+-.-
T Consensus 20 ~~~A~~~~~~~~~~~p~~~~----~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~ 95 (225)
T 2yhc_A 20 WRQAITQLEALDNRYPFGPY----SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSA 95 (225)
T ss_dssp HHHHHHHHHHHHHHCTTSTT----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhCCCChH----HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhh
Confidence 36799999999876544442 335566677888887 99999999999999999988776776666554321
Q ss_pred ---------hhcCHHHHHHHHHhhhccCCchH
Q psy16704 104 ---------EEEDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 104 ---------e~~D~e~Ft~aV~eYD~isrLD~ 126 (146)
...+...+.+++..|+++-+.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P 127 (225)
T 2yhc_A 96 LQGFFGVDRSDRDPQQARAAFSDFSKLVRGYP 127 (225)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTCT
T ss_pred hhhhhccchhhcCcHHHHHHHHHHHHHHHHCc
Confidence 11245677788888877766543
No 7
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=88.11 E-value=3.8 Score=26.49 Aligned_cols=81 Identities=10% Similarity=0.125 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|++.|++..+..=+++ +.+..-|.|++-. +...|...+++-.+++|..... ...+-.+... ..
T Consensus 21 ~~A~~~~~~al~~~p~~~-------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----~~~lg~~~~~--~~ 86 (126)
T 3upv_A 21 PNAVKAYTEMIKRAPEDA-------RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRA-----YIRKATAQIA--VK 86 (126)
T ss_dssp HHHHHHHHHHHHHCTTCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHHhCCCCh-------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHH-----HHHHHHHHHH--Hh
Confidence 578899998877654442 6677778888887 9999999999999999987432 2222222222 23
Q ss_pred HHHHHHHhhhccCCch
Q psy16704 110 AFSETVKEFDSISRLD 125 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD 125 (146)
.+.+++..|.+.-+++
T Consensus 87 ~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 87 EYASALETLDAARTKD 102 (126)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC
Confidence 4677888888777777
No 8
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=87.44 E-value=0.95 Score=28.20 Aligned_cols=51 Identities=6% Similarity=-0.011 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++..+..=++ .+.+..-|.|++.. +...|...+++..+.+|...
T Consensus 21 ~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 72 (111)
T 2l6j_A 21 REAVHCYDQLITAQPQN-------PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAE 72 (111)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTT
T ss_pred HHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcc
Confidence 57889999887764433 35567778888888 99999999999999999983
No 9
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=86.68 E-value=2.7 Score=30.87 Aligned_cols=89 Identities=8% Similarity=0.019 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhh----
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEE---- 105 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~---- 105 (146)
.+|++.|+++.+..=+++ + +-+.++.-|.|++-. |...|...+++..+.+|.-....+..+..+.+ ...
T Consensus 32 ~~A~~~~~~~l~~~p~~~---~-~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~--~~~~~~~ 105 (261)
T 3qky_A 32 DRAIEYFKAVFTYGRTHE---W-AADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMC--YYKLSPP 105 (261)
T ss_dssp HHHHHHHHHHGGGCSCST---T-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHH--HHHHCCC
T ss_pred HHHHHHHHHHHHhCCCCc---c-hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHH--HHHhccc
Confidence 579999999877654443 2 245567777888877 99999999999999999876666654444433 322
Q ss_pred --cCHHHHHHHHHhhhccCCch
Q psy16704 106 --EDSDAFSETVKEFDSISRLD 125 (146)
Q Consensus 106 --~D~e~Ft~aV~eYD~isrLD 125 (146)
.|...+.+++..|+++-+++
T Consensus 106 ~~~~~~~~~~A~~~~~~~l~~~ 127 (261)
T 3qky_A 106 YELDQTDTRKAIEAFQLFIDRY 127 (261)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHC
T ss_pred ccccchhHHHHHHHHHHHHHHC
Confidence 23566667777776665443
No 10
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=84.62 E-value=5.8 Score=29.03 Aligned_cols=96 Identities=7% Similarity=-0.024 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhchhHHh-----------HHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHH
Q psy16704 28 TFRIVYSLLFYSTGKAATENSLMKYNSKEYF-----------FKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKF 95 (146)
Q Consensus 28 ~~~~~A~eiyE~VA~~sl~n~LlKysaKeyf-----------fkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~kl 95 (146)
.--.+|.+.|+++.+..=+++... .+..+. +.-|.|+.-. |...|...+++..+.+|.-....+.-+
T Consensus 111 ~~~~~A~~~~~~~l~~~p~~~~~~-~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~ 189 (261)
T 3qky_A 111 TDTRKAIEAFQLFIDRYPNHELVD-DATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALV 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHCTTCTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred hhHHHHHHHHHHHHHHCcCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHH
Confidence 344689999999988776665432 222222 7778888888 999999999999999998766555544
Q ss_pred HHHHHHHHhhc--------CHHHHHHHHHhhhccCCchH
Q psy16704 96 LLKLIESLEEE--------DSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 96 L~~LieAve~~--------D~e~Ft~aV~eYD~isrLD~ 126 (146)
.. ..+.... ..+.+.+++..|+++-+.++
T Consensus 190 ~l--~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p 226 (261)
T 3qky_A 190 GA--MRAYIAYAEQSVRARQPERYRRAVELYERLLQIFP 226 (261)
T ss_dssp HH--HHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred HH--HHHHHHhcccchhhcccchHHHHHHHHHHHHHHCC
Confidence 33 3333221 33778888888887765543
No 11
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=83.70 E-value=2.8 Score=26.87 Aligned_cols=67 Identities=12% Similarity=-0.070 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHh
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE 104 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve 104 (146)
.+|.+.|++..+..-++ -+.+..-|.|+... +...|...+++-.+.+|...+....+-+...+..+.
T Consensus 36 ~~A~~~~~~al~~~p~~-------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 36 DAALPHLRAALDFDPTY-------SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhc
Confidence 45666666665543221 22334445555555 777777777777776666555554444444444443
No 12
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=83.63 E-value=3.9 Score=27.34 Aligned_cols=82 Identities=15% Similarity=0.023 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|++..+..=++ -+.++.-|.|+.-. +...|..++++-.++||.....+. .+-.+. ....
T Consensus 34 ~~A~~~~~~al~~~P~~-------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~-----~la~~~--~~~g 99 (121)
T 1hxi_A 34 AEAALAFEAVCQKEPER-------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHA-----ALAVSH--TNEH 99 (121)
T ss_dssp HHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH-----HHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH-----HHHHHH--HHcC
Confidence 67889999887754443 24556667777777 999999999999999999865432 222222 1245
Q ss_pred HHHHHHHhhhccCCchH
Q psy16704 110 AFSETVKEFDSISRLDQ 126 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD~ 126 (146)
.+.+++..|++.-++++
T Consensus 100 ~~~~A~~~~~~al~~~P 116 (121)
T 1hxi_A 100 NANAALASLRAWLLSQP 116 (121)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 67778888777666654
No 13
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=81.96 E-value=8.4 Score=25.88 Aligned_cols=93 Identities=11% Similarity=0.142 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|++.|++.-+..=++ -+.++.-|.|++-. +...|...+++-.++||.+.... ..+-.+.. ...
T Consensus 30 ~~A~~~~~~al~~~p~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~-----~~lg~~~~--~~~ 95 (126)
T 4gco_A 30 PTAMRHYNEAVKRDPEN-------AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGY-----IRKAACLV--AMR 95 (126)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH-----HHHHHHHH--HTT
T ss_pred HHHHHHHHHHHHhCCCC-------HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHH-----HHHHHHHH--HCC
Confidence 47888898876654333 35667778888887 99999999999999999985432 22222222 234
Q ss_pred HHHHHHHhhhccCCchHHHHHHHHHHHh
Q psy16704 110 AFSETVKEFDSISRLDQWYTTMLLKIKR 137 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD~WKT~mLLkIKk 137 (146)
.|.+++..|.+.-++|+=-......+.+
T Consensus 96 ~~~~A~~~~~~al~l~P~~~~a~~~l~~ 123 (126)
T 4gco_A 96 EWSKAQRAYEDALQVDPSNEEAREGVRN 123 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence 5778999999888888766665555544
No 14
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=81.33 E-value=3.3 Score=26.79 Aligned_cols=65 Identities=3% Similarity=-0.035 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIES 102 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieA 102 (146)
.+|.+.|++..+..=++ . +.++.-|.|+... +...|...+++..+.+|++.++....-+...+..
T Consensus 55 ~~A~~~~~~al~~~p~~------~-~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~ 120 (126)
T 3upv_A 55 PEAIADCNKAIEKDPNF------V-RAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYK 120 (126)
T ss_dssp HHHHHHHHHHHHHCTTC------H-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCc------H-HHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHH
Confidence 57888898887654332 2 3455666677776 9999999999999999877665554444444433
No 15
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=81.11 E-value=11 Score=25.67 Aligned_cols=95 Identities=11% Similarity=0.035 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|++.|++..+..=++ -+.+..-+.|++-. +...|...+++-.+++|..... ...+-.+... ..
T Consensus 28 ~~A~~~~~~al~~~p~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----~~~lg~~~~~--~g 93 (164)
T 3sz7_A 28 SKAIDLYTQALSIAPAN-------PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKA-----WSRLGLARFD--MA 93 (164)
T ss_dssp HHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHHhCCcC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHH--cc
Confidence 57889999887765443 35677778888887 9999999999999999987422 2223333222 23
Q ss_pred HHHHHHHhhhccCCch-----HHHHHHHHHHHhhc
Q psy16704 110 AFSETVKEFDSISRLD-----QWYTTMLLKIKRQI 139 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD-----~WKT~mLLkIKk~I 139 (146)
.+.+++..|.+.-+++ .|...-+.++++.+
T Consensus 94 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~ 128 (164)
T 3sz7_A 94 DYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKI 128 (164)
T ss_dssp CHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Confidence 3556666666554444 45555566666555
No 16
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=80.21 E-value=6.5 Score=24.99 Aligned_cols=102 Identities=10% Similarity=0.037 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|+++.+..-+++. . .+.++.-|.|+.-. |...|...+++..+.+|.....-+..+....+- .+.|+.+
T Consensus 19 ~~A~~~~~~~~~~~p~~~~---~-~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~-~~~g~~~ 93 (129)
T 2xev_A 19 DDASQLFLSFLELYPNGVY---T-PNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQ-YGEGKNT 93 (129)
T ss_dssp HHHHHHHHHHHHHCSSSTT---H-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH-HHTTCHH
T ss_pred HHHHHHHHHHHHHCCCCcc---c-HHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHH-HHcCCHH
Confidence 5889999998887666542 1 24556667788777 999999999999999998866555555444433 3567765
Q ss_pred HHHHHHHhhhccCCchHHHHHHHHHHHh
Q psy16704 110 AFSETVKEFDSISRLDQWYTTMLLKIKR 137 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD~WKT~mLLkIKk 137 (146)
.=.+...+.-+..+=+++-.....++++
T Consensus 94 ~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 94 EAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp HHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 5444444433344445555555555443
No 17
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=79.89 E-value=21 Score=30.51 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=51.0
Q ss_pred hHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHHhhhccCCchHHH
Q psy16704 55 KEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWY 128 (146)
Q Consensus 55 KeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~eYD~isrLD~WK 128 (146)
.+-+--.+||.+.+ |..+.+.-+. -... +.| ..+|...+.+++.|+.++|...|.+.+.+|..--..|+.-
T Consensus 220 ~~~lkYlvL~aLl~~~r~el~~~l~-~~~~-~~~-~~pei~~l~~L~~a~~~~dl~~f~~iL~~~~~~l~~D~~l 291 (394)
T 3txn_A 220 LTSLKYMLLCKIMLGQSDDVNQLVS-GKLA-ITY-SGRDIDAMKSVAEASHKRSLADFQAALKEYKKELAEDVIV 291 (394)
T ss_dssp HHHHHHHHHHHHHTTCGGGHHHHHH-SHHH-HTT-CSHHHHHHHHHHHHHHTTCHHHHHHHHHHSTTTTTTSHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhc-cccc-ccc-CCccHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcChHH
Confidence 44555588999998 7555554221 0000 113 4578888999999999999999999999997766668874
No 18
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=79.64 E-value=7.7 Score=26.75 Aligned_cols=53 Identities=9% Similarity=0.032 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
.+|++.|++.....=++ -++++.-|.|+.-. +...|...+++-..++|.....
T Consensus 38 ~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 91 (148)
T 2vgx_A 38 EDAHXVFQALCVLDHYD-------SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRF 91 (148)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHH
T ss_pred HHHHHHHHHHHHcCccc-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchH
Confidence 57888888877654443 34556667777766 8888988898888899887644
No 19
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=78.84 E-value=9.1 Score=25.59 Aligned_cols=53 Identities=13% Similarity=0.044 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
.+|.+.|+++....=++ .++++.-|.|+.-. +...|...+++-.+.+|.....
T Consensus 35 ~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 88 (142)
T 2xcb_A 35 DDAQKIFQALCMLDHYD-------ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRF 88 (142)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHH
T ss_pred HHHHHHHHHHHHhCCcc-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHH
Confidence 57888888877654333 24556667777766 8888888888888888876544
No 20
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=78.82 E-value=10 Score=24.05 Aligned_cols=55 Identities=15% Similarity=0.075 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCcc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQD 89 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~ 89 (146)
.+|.+.|+++.+..=+++. +.+.++.-|.|+.-. |...|...+++..+.+|.-..
T Consensus 56 ~~A~~~~~~~~~~~p~~~~----~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 111 (129)
T 2xev_A 56 QLAEAQFRDLVSRYPTHDK----AAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDA 111 (129)
T ss_dssp HHHHHHHHHHHHHCTTSTT----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHH
T ss_pred HHHHHHHHHHHHHCCCCcc----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChH
Confidence 5788888888776544432 345677778888887 999999999999999886543
No 21
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=78.48 E-value=12 Score=28.15 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESL 103 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAv 103 (146)
..+++++|++.+.. +|. .-+|+++.-++.+.-. |...|++.+++--+.+|.+ |+.+=|+++|+..
T Consensus 52 ~~gI~lLe~ll~~~--~p~---~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n---~QA~~Lk~~ie~~ 117 (152)
T 1pc2_A 52 RKGIVLLEELLPKG--SKE---EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN---NQAKELERLIDKA 117 (152)
T ss_dssp HHHHHHHHHHHHHS--CHH---HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--Ccc---chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHH
Confidence 47999999999865 121 4589999999999777 9999999999999999965 4555556655543
No 22
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=76.69 E-value=15 Score=24.89 Aligned_cols=54 Identities=9% Similarity=-0.010 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccch
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTR 91 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SR 91 (146)
.+|.+.|++..+..=++ -+.++.-|.|+... |...|...+++..+++|......
T Consensus 62 ~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 62 EKAAEDAELATVVDPKY-------SKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 57888898887764333 24455666777776 99999999999999999998743
No 23
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=74.28 E-value=9 Score=27.18 Aligned_cols=56 Identities=14% Similarity=0.148 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPA 86 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPs 86 (146)
.+|.+.|++..+..-+++-.....-+.+..-|.|+... +...|...+++-.+.+|.
T Consensus 93 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 93 QEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 57899999988877777766566667788888998888 999999999999999998
No 24
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=72.69 E-value=11 Score=23.99 Aligned_cols=64 Identities=8% Similarity=-0.000 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIE 101 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~Lie 101 (146)
.+|++.|+++.+..=+++ +.++.-|.|+... +...|...+++..+++|...+....+-+..++.
T Consensus 24 ~~A~~~~~~al~~~p~~~-------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVETDPDYV-------GTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHHSTTCT-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHHHH
Confidence 578888888877544433 3455556676666 888888888888888887766665555555544
No 25
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=71.81 E-value=17 Score=24.15 Aligned_cols=53 Identities=17% Similarity=0.164 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
.+|.+.|++.....=+++ +.++.-|.|+... |...|...+++..+.+|.-...
T Consensus 69 ~~A~~~~~~al~~~p~~~-------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 69 EQALQSYSYGALMDINEP-------RFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHHHHHHHHHHCTTCT-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHhcCCCCc-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 478888888877654443 4556777888877 8999999999988888865433
No 26
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=71.54 E-value=9.7 Score=25.56 Aligned_cols=56 Identities=11% Similarity=0.134 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchH
Q psy16704 30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTRE 92 (146)
Q Consensus 30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE 92 (146)
-.+|++.|+++-+-.=++ + +.++.-|.|+... +...|...+++-.++||.....++
T Consensus 63 ~~~A~~~~~~al~~~p~~------~-~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~ 119 (126)
T 4gco_A 63 FQRALDDCDTCIRLDSKF------I-KGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEARE 119 (126)
T ss_dssp HHHHHHHHHHHHHHCTTC------H-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhhhh------h-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHH
Confidence 357899999887643222 2 3455667777777 999999999999999999876554
No 27
>3t9o_A DGC, diguanylate cyclase YDEH; putative zinc sensor, CZB domain, metal protein; 2.20A {Escherichia coli}
Probab=71.43 E-value=4 Score=29.67 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhhcC-----HHHHHHHHHhhhccCCchHHHHHHH
Q psy16704 94 KFLLKLIESLEEED-----SDAFSETVKEFDSISRLDQWYTTML 132 (146)
Q Consensus 94 klL~~LieAve~~D-----~e~Ft~aV~eYD~isrLD~WKT~mL 132 (146)
..-.++++|+++|| .+.|.++..++ +.-||++|+.+|
T Consensus 85 ~~a~~ii~~~~~g~~~~a~~~~~e~as~~~--~~~ld~~k~~Ll 126 (135)
T 3t9o_A 85 NCGRELMLAIVENHWQDAHFDAFQEGLLSF--TAALTDYKIYLL 126 (135)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 44567999999999 45666666666 677888888876
No 28
>1tzv_A NUSB protein, N utilization substance protein B homolog; RNA-protein interaction, transcriptional antitermination, transcription regulation; 1.35A {Thermotoga maritima} SCOP: a.79.1.1 PDB: 1tzu_A 1tzt_A 1tzw_A 1tzx_A*
Probab=71.30 E-value=5.7 Score=28.81 Aligned_cols=68 Identities=10% Similarity=0.157 Sum_probs=50.2
Q ss_pred HHHHHHHhhcc-cchhhchh-HHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHh
Q psy16704 37 FYSTGKAATEN-SLMKYNSK-EYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE 104 (146)
Q Consensus 37 yE~VA~~sl~n-~LlKysaK-eyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve 104 (146)
.+.+....+++ ++-+-+.- --.|+-|++++.. |.+-.+-+++++.++--.|.+...++|+.+++..+.
T Consensus 61 lD~~I~~~l~~w~l~rl~~~~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVL~~i~ 131 (142)
T 1tzv_A 61 IDDLISRYLEKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIA 131 (142)
T ss_dssp HHHHHHTTCSSSCGGGSCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCChHHCCHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHCCCcchhhHHHHHHHHH
Confidence 44455555554 44443322 3678888898887 778888889999988888988889999999998773
No 29
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=70.92 E-value=15 Score=22.89 Aligned_cols=80 Identities=11% Similarity=0.175 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHH-HhhcCH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIES-LEEEDS 108 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieA-ve~~D~ 108 (146)
..|.+.|++..+..-++ -+.++.-+.|+.-. +...|...+++-.+.+|.... ....+..+ .+.|+
T Consensus 33 ~~A~~~~~~al~~~~~~-------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----~~~~la~~~~~~~~- 99 (133)
T 2lni_A 33 PQAMKHYTEAIKRNPKD-------AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIK-----GYTRKAAALEAMKD- 99 (133)
T ss_dssp HHHHHHHHHHHTTCTTC-------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHH-----HHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHcCCCc-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchH-----HHHHHHHHHHHHhh-
Confidence 46888888876543222 34556666777766 999999999999999997432 22233332 23343
Q ss_pred HHHHHHHHhhhccCCch
Q psy16704 109 DAFSETVKEFDSISRLD 125 (146)
Q Consensus 109 e~Ft~aV~eYD~isrLD 125 (146)
+.+++.-|.+.-+++
T Consensus 100 --~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 100 --YTKAMDVYQKALDLD 114 (133)
T ss_dssp --HHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHhC
Confidence 445555555544433
No 30
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=69.86 E-value=20 Score=28.27 Aligned_cols=90 Identities=4% Similarity=-0.006 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhc----------hhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYN----------SKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKL 99 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKys----------aKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~L 99 (146)
..|++.|++.....=++...... ....+++-+.|++-. +...|...+++-.+.||... +.+..+
T Consensus 196 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~-----~a~~~l 270 (338)
T 2if4_A 196 EEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNP-----KALFRR 270 (338)
T ss_dssp HHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCH-----HHHHHH
T ss_pred HHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHH
Confidence 36777888766543333211111 113678888999988 99999999999999999753 233344
Q ss_pred HHHHhhcCHHHHHHHHHhhhccCCchHH
Q psy16704 100 IESLEEEDSDAFSETVKEFDSISRLDQW 127 (146)
Q Consensus 100 ieAve~~D~e~Ft~aV~eYD~isrLD~W 127 (146)
-.+.. ....|.+|+..|.+.-++++=
T Consensus 271 g~a~~--~~g~~~~A~~~l~~al~l~p~ 296 (338)
T 2if4_A 271 GKAKA--ELGQMDSARDDFRKAQKYAPD 296 (338)
T ss_dssp HHHHH--TTTCHHHHHHHHHHTTC----
T ss_pred HHHHH--HcCCHHHHHHHHHHHHHHCCC
Confidence 33433 244678899999998888763
No 31
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=69.45 E-value=6.9 Score=27.42 Aligned_cols=83 Identities=5% Similarity=0.030 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchH--HHHHHHHHHHHhhcC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTRE--YKFLLKLIESLEEED 107 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE--~klL~~LieAve~~D 107 (146)
..|.+.|++..+.. ++ -+.++.-|.|+... |...|...+++..+.+|....... ......+..+....
T Consensus 22 ~~A~~~~~~a~~~~-~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 92 (258)
T 3uq3_A 22 DEAIEHYNKAWELH-KD-------ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKL- 92 (258)
T ss_dssp HHHHHHHHHHHHHS-CC-------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHhh-cc-------HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHc-
Confidence 57899999988776 43 24566667777777 999999999999999988743322 34444444444322
Q ss_pred HHHHHHHHHhhhccCC
Q psy16704 108 SDAFSETVKEFDSISR 123 (146)
Q Consensus 108 ~e~Ft~aV~eYD~isr 123 (146)
..+.+++.-|++..+
T Consensus 93 -~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 93 -GDLKKTIEYYQKSLT 107 (258)
T ss_dssp -TCHHHHHHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHh
Confidence 234455555554444
No 32
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=69.00 E-value=20 Score=22.89 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++.....-++ -+.+..-|.|+... |...|...+++-.+.+|...
T Consensus 26 ~~A~~~~~~al~~~~~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 26 PEAAACYGRAITRNPLV-------AVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhhCcCc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH
Confidence 57888888877654333 35677778888887 99999999999999999853
No 33
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=68.75 E-value=21 Score=25.26 Aligned_cols=52 Identities=8% Similarity=-0.075 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCcc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQD 89 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~ 89 (146)
.+|.+.|+++....=+| .++++.-|.|+... +...|..++++-.+++|....
T Consensus 53 ~eA~~~~~~al~~~P~~-------~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~ 105 (151)
T 3gyz_A 53 EEAEVFFRFLCIYDFYN-------VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYT 105 (151)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcH
Confidence 57778887777654433 24566666666666 777888888888888887653
No 34
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=67.95 E-value=18 Score=22.19 Aligned_cols=56 Identities=7% Similarity=-0.075 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPA 86 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPs 86 (146)
..|.+.|++.....-+++--....-..++.-|.|+... |...|...+++..+.+|+
T Consensus 55 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 55 NKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 57888888887766554322222244556666677766 999999999999888884
No 35
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=67.24 E-value=17 Score=24.53 Aligned_cols=70 Identities=16% Similarity=0.121 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc-c-chHHHHHHHHHHHHhhcC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ-D-TREYKFLLKLIESLEEED 107 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~-~-SRE~klL~~LieAve~~D 107 (146)
..|++.|+++-+..-+ +++-|+ +-|.|+... +...|...+++..+++|... . .++-..+...+..-++..
T Consensus 80 ~~A~~~~~~al~~~p~------~~~a~~-~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~ 152 (162)
T 3rkv_A 80 HEAEETSSEVLKREET------NEKALF-RRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADS 152 (162)
T ss_dssp HHHHHHHHHHHHHSTT------CHHHHH-HHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHhcCCc------chHHHH-HHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888887765322 344454 455666666 99999999999999999875 3 334444555444444443
No 36
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=66.81 E-value=29 Score=24.09 Aligned_cols=81 Identities=10% Similarity=0.115 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|++.....-++ .+.+..-|.|+... +...|...+++..+.+|..... ...+-.+.... .
T Consensus 156 ~~A~~~~~~a~~~~~~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~-----~~~l~~~~~~~--g 221 (258)
T 3uq3_A 156 PNAVKAYTEMIKRAPED-------ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRA-----YIRKATAQIAV--K 221 (258)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHhcCccc-------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHH-----HHHHHHHHHHH--h
Confidence 57888888877654333 24566666777766 9999999999999999886432 22232322221 3
Q ss_pred HHHHHHHhhhccCCch
Q psy16704 110 AFSETVKEFDSISRLD 125 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD 125 (146)
.+.+++..|++.-+++
T Consensus 222 ~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 222 EYASALETLDAARTKD 237 (258)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhC
Confidence 3556666666666666
No 37
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=66.76 E-value=9.6 Score=26.26 Aligned_cols=51 Identities=14% Similarity=0.118 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++.....=+++ +.++.-|.|++.. +...|...+++..+++|.-+
T Consensus 72 ~~A~~~~~~al~l~p~~~-------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 72 DLAIHSYSYGAVMDIXEP-------RFPFHAAECLLQXGELAEAESGLFLAQELIANXP 123 (148)
T ss_dssp HHHHHHHHHHHHHSTTCT-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHhcCCCCc-------hHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 578888888776544443 4456678888887 99999999999988888644
No 38
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=65.46 E-value=18 Score=21.23 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCcc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQD 89 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~ 89 (146)
..|.+.|++.....-++ .+.++.-|.|+... +...|...+++..+.+|....
T Consensus 26 ~~A~~~~~~a~~~~~~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 78 (91)
T 1na3_A 26 DEAIEYYQKALELDPNN-------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE 78 (91)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHH
Confidence 47888888877654332 24556667777777 999999999999999997643
No 39
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=64.56 E-value=19 Score=26.00 Aligned_cols=51 Identities=10% Similarity=-0.031 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCcc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQD 89 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~ 89 (146)
.+|.+.|++..+.. +++ +.++.-|.|+... +...|...+++-.+.+|....
T Consensus 135 ~~A~~~~~~al~~~-~~~-------~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 186 (217)
T 2pl2_A 135 DKAEASLKQALALE-DTP-------EIRSALAELYLSMGRLDEALAQYAKALEQAPKDLD 186 (217)
T ss_dssp HHHHHHHHHHHHHC-CCH-------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHhcc-cch-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 35555555555444 222 2334445555555 666777777777777776553
No 40
>3r2d_A Protein NUSB, N utilization substance protein B; cross species NUSB-NUSE-RNA interaction; 2.20A {Aquifex aeolicus} PDB: 2jr0_A 3r2c_A* 4eya_A
Probab=62.92 E-value=11 Score=27.84 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=48.8
Q ss_pred HHHHHHHhhcc-cchhhchh-HHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHh
Q psy16704 37 FYSTGKAATEN-SLMKYNSK-EYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE 104 (146)
Q Consensus 37 yE~VA~~sl~n-~LlKysaK-eyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve 104 (146)
.+.+....+++ ++-+-+.- --.|+.|++++.. |.+-.+-+++++.++--.|.+.+.++|+.+++..+-
T Consensus 62 lD~~i~~~l~~w~~~rl~~~~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~ 132 (149)
T 3r2d_A 62 IDSIIEKHLKGWSIDRLGYVERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIY 132 (149)
T ss_dssp HHHHHHTTC---CGGGSCHHHHHHHHHHHHHHTTSCCSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccccCHHHHHHHHHHHHHHHHcCCCCCeehHHHHHHHHHHhCCCCccccchHHhhHHH
Confidence 34444444444 43333322 3467888888887 788889999999999888999999999999998774
No 41
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=62.80 E-value=24 Score=25.40 Aligned_cols=87 Identities=11% Similarity=0.092 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHh--hc-
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE--EE- 106 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve--~~- 106 (146)
.+|.+.|++..+..=++ -+.++.-|.|+... +...|...+++-.+.+|.+....-. +-.+..... .+
T Consensus 22 ~~A~~~~~~al~~~p~~-------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~--lg~~~~~~~~~~~~ 92 (217)
T 2pl2_A 22 DAALTLFERALKENPQD-------PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMV--LSEAYVALYRQAED 92 (217)
T ss_dssp HHHHHHHHHHHTTSSSC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH--HHHHHHHhhhhhhh
Confidence 57888888876543333 24566667777776 9999999999999999998654321 222111110 00
Q ss_pred ---CHHHHHHHHHhhhccCCchH
Q psy16704 107 ---DSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 107 ---D~e~Ft~aV~eYD~isrLD~ 126 (146)
....+.+++..|++.-++++
T Consensus 93 ~~~~~g~~~~A~~~~~~al~~~P 115 (217)
T 2pl2_A 93 RERGKGYLEQALSVLKDAERVNP 115 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT
T ss_pred hcccccCHHHHHHHHHHHHHhCc
Confidence 01556777777777666654
No 42
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=62.38 E-value=26 Score=23.26 Aligned_cols=81 Identities=9% Similarity=0.112 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchH--HHHHHHHHHHHhhcC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTRE--YKFLLKLIESLEEED 107 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE--~klL~~LieAve~~D 107 (146)
.+|++.|++.-.-.=++ -+.+.+-|.|++-. +...|...+++-.+++|....... ++....+=.+.+.
T Consensus 25 ~~A~~~y~~Al~~~p~~-------~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~-- 95 (127)
T 4gcn_A 25 EKAHVHYDKAIELDPSN-------ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK-- 95 (127)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHhCCCC-------HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH--
Confidence 47899998876543222 34667778888887 999999999999999998765432 3334333333332
Q ss_pred HHHHHHHHHhhhc
Q psy16704 108 SDAFSETVKEFDS 120 (146)
Q Consensus 108 ~e~Ft~aV~eYD~ 120 (146)
...+.+++..|.+
T Consensus 96 ~~~~~~A~~~~~k 108 (127)
T 4gcn_A 96 QNDLSLAVQWFHR 108 (127)
T ss_dssp TTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 2345555555544
No 43
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=61.23 E-value=33 Score=26.07 Aligned_cols=86 Identities=13% Similarity=0.085 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc-hHHHHHHHHHHHHhhcCH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT-REYKFLLKLIESLEEEDS 108 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S-RE~klL~~LieAve~~D~ 108 (146)
..|.+.|++.+.-.-+.+ -...+-..+.++|.|+.-. |...|...+++-.++.+.-.+. +....+..+-.+.+.||
T Consensus 53 ~~A~~~~~~al~~~~~~~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~g~- 130 (307)
T 2ifu_A 53 EQAKDAYLQEAEAHANNR-SLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPLD- 130 (307)
T ss_dssp HHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHcCC-
Confidence 567777777766654443 2334556778888888877 8888888887777776666544 45677777777776644
Q ss_pred HHHHHHHHhhhc
Q psy16704 109 DAFSETVKEFDS 120 (146)
Q Consensus 109 e~Ft~aV~eYD~ 120 (146)
+.+++.-|.+
T Consensus 131 --~~~A~~~~~~ 140 (307)
T 2ifu_A 131 --LSKAVHLYQQ 140 (307)
T ss_dssp --HHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 4444444443
No 44
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=60.40 E-value=37 Score=23.59 Aligned_cols=86 Identities=9% Similarity=0.021 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHhhcccchhhch-----------hHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNS-----------KEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLK 98 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysa-----------KeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~ 98 (146)
..|.+.|++.....-+++- |.. -+.+.+-+.|++.. +...|...+++-.+.+|..... +..
T Consensus 55 ~~A~~~~~~al~~~~~~~~--~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----~~~ 127 (198)
T 2fbn_A 55 NEAIVKYKEALDFFIHTEE--WDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKA-----LYK 127 (198)
T ss_dssp HHHHHHHHHHHHTTTTCTT--CCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH-----HHH
T ss_pred HHHHHHHHHHHHHHhcccc--cchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHH-----HHH
Confidence 4788888888765444431 111 15667778888887 9999999999999999976422 222
Q ss_pred HHHH-HhhcCHHHHHHHHHhhhccCCchH
Q psy16704 99 LIES-LEEEDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 99 LieA-ve~~D~e~Ft~aV~eYD~isrLD~ 126 (146)
+-.+ ...| .+.+++..|.+.-++++
T Consensus 128 lg~~~~~~~---~~~~A~~~~~~al~~~p 153 (198)
T 2fbn_A 128 LGVANMYFG---FLEEAKENLYKAASLNP 153 (198)
T ss_dssp HHHHHHHHT---CHHHHHHHHHHHHHHST
T ss_pred HHHHHHHcc---cHHHHHHHHHHHHHHCC
Confidence 2222 2333 35556666666555543
No 45
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=59.91 E-value=42 Score=23.57 Aligned_cols=88 Identities=8% Similarity=0.042 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHH--HHHHHHHHHHhhcC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREY--KFLLKLIESLEEED 107 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~--klL~~LieAve~~D 107 (146)
.+|.+.|++..+..=+ -.+.+..-|.|+... |...|...+++-.+.+|........ .....+-.+. ..
T Consensus 59 ~~A~~~~~~al~~~p~-------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~--~~ 129 (228)
T 4i17_A 59 KEAADYFDIAIKKNYN-------LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKF--QQ 129 (228)
T ss_dssp HHHHHHHHHHHHTTCS-------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH--HH
T ss_pred HHHHHHHHHHHHhCcc-------hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHH--HH
Confidence 4566666665532211 223344455555555 7788888888888888765422111 1111111111 12
Q ss_pred HHHHHHHHHhhhccCCchHH
Q psy16704 108 SDAFSETVKEFDSISRLDQW 127 (146)
Q Consensus 108 ~e~Ft~aV~eYD~isrLD~W 127 (146)
...+.+++..|.+.-++++=
T Consensus 130 ~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 130 AGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp TTCHHHHHHHHHHHTTSSCH
T ss_pred hccHHHHHHHHHHHHhcCCC
Confidence 34567788888877777654
No 46
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=59.87 E-value=32 Score=22.25 Aligned_cols=53 Identities=4% Similarity=0.007 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
..|.+.|++..+..-++ -+.++.-|.|+... +...|...+++..+.+|.....
T Consensus 64 ~~A~~~~~~a~~~~~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 117 (166)
T 1a17_A 64 GYALGDATRAIELDKKY-------IKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDA 117 (166)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHhCccc-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHH
Confidence 46777777776653222 23455666666666 8888888888888888876543
No 47
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=59.49 E-value=40 Score=23.17 Aligned_cols=60 Identities=8% Similarity=-0.006 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHhhcccc---------hhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 31 IVYSLLFYSTGKAATENSL---------MKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~L---------lKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
.+|.+.|++..+..-+++- .+...-+.++.-|.|+... |...|...+++..+.+|.....
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 157 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHS 157 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGG
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccc
Confidence 5788888888776555441 1112224556667777777 9999999999999999987543
No 48
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=59.42 E-value=26 Score=20.91 Aligned_cols=49 Identities=12% Similarity=0.121 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPA 86 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPs 86 (146)
.+|.+.|++..+..-++ -+.++.-|.|+... +...|...+++..+.+|.
T Consensus 23 ~~A~~~~~~a~~~~~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 23 TESIDLFEKAIQLDPEE-------SKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhCcCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 47888888877654332 23455666777776 999999999999999998
No 49
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=57.27 E-value=53 Score=23.88 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|+++-...-++ .+.++.-|.|+... |...|...+++-.+.+|..... ...+..+... ..
T Consensus 20 ~~A~~~~~~~l~~~p~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----~~~l~~~~~~--~~ 85 (359)
T 3ieg_A 20 ADALSQFHAAVDGDPDN-------YIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAA-----RLQRGHLLLK--QG 85 (359)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHH--HT
T ss_pred HHHHHHHHHHHhhCccc-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchH-----HHHHHHHHHH--cC
Confidence 57889999887754433 25666777777777 9999999999999999987632 2222222221 23
Q ss_pred HHHHHHHhhhccCCchH
Q psy16704 110 AFSETVKEFDSISRLDQ 126 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD~ 126 (146)
.+.+++..|.+..++++
T Consensus 86 ~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 86 KLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp CHHHHHHHHHHHHTSCC
T ss_pred ChHHHHHHHHHHHhcCC
Confidence 46677777777766655
No 50
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=56.31 E-value=21 Score=22.88 Aligned_cols=50 Identities=6% Similarity=-0.094 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAF 87 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF 87 (146)
.+|.+.|+++.+..=++ .+.++.-|.|+... +...|...+++..+.+|.-
T Consensus 44 ~~A~~~~~~al~~~p~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 44 RKAEAVLANGVKQFPNH-------QALRVFYAMVLYNLGRYEQGVELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhCCCc-------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 46777777776654444 24455556666666 7777777777777776654
No 51
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=56.25 E-value=14 Score=26.50 Aligned_cols=31 Identities=6% Similarity=0.114 Sum_probs=16.5
Q ss_pred hHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 58 FFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 58 ffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
++.-|.|+... +...|...+++-.++||...
T Consensus 91 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 91 LEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 33444444444 55566666666666666543
No 52
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=55.93 E-value=69 Score=26.36 Aligned_cols=89 Identities=11% Similarity=0.109 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHhhcccc--------hhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSL--------MKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIE 101 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~L--------lKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~Lie 101 (146)
..|++.|++.....=+++- ++-..-..+++-+.|++-. +...|...+++-.++||... +.+..+-.
T Consensus 285 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~-----~a~~~~g~ 359 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANE-----KGLYRRGE 359 (457)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-----HHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH-----HHHHHHHH
Confidence 4688888887765443321 0001124566778888887 88888888888888888753 22233333
Q ss_pred HHhhcCHHHHHHHHHhhhccCCchH
Q psy16704 102 SLEEEDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 102 Ave~~D~e~Ft~aV~eYD~isrLD~ 126 (146)
+... ...|.+|+..|.+.-++++
T Consensus 360 a~~~--~g~~~~A~~~~~~al~l~P 382 (457)
T 1kt0_A 360 AQLL--MNEFESAKGDFEKVLEVNP 382 (457)
T ss_dssp HHHH--TTCHHHHHHHHHHHHTTC-
T ss_pred HHHH--ccCHHHHHHHHHHHHHhCC
Confidence 3222 2356677777777777665
No 53
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=55.54 E-value=26 Score=24.74 Aligned_cols=63 Identities=13% Similarity=0.127 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESL 103 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAv 103 (146)
.+|++.|++..+-.=+++ +.+++-|.|+... +...|..++++-.+++|.-+ -.+-.+++++++
T Consensus 87 ~~Ai~~~~~al~l~P~~~-------~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~---~~~~A~~ll~~l 150 (151)
T 3gyz_A 87 QQAADLYAVAFALGKNDY-------TPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK---LKIKAQSYLDAI 150 (151)
T ss_dssp HHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCc-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH---HHHHHHHHHHhh
Confidence 579999999888766554 5667788899988 99999999999999998643 344445554443
No 54
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=55.22 E-value=84 Score=25.82 Aligned_cols=81 Identities=11% Similarity=0.098 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCH
Q psy16704 30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDS 108 (146)
Q Consensus 30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~ 108 (146)
-.+|.+.|++..+..= -...+ -+.++.-|.|+... +...|...+++..+++|.....+.. +..+... .
T Consensus 237 ~~~A~~~~~~al~~~p---~~~~~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~--l~~~~~~-----l 305 (474)
T 4abn_A 237 SQQALSAYAQAEKVDR---KASSN-PDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQR--EQQLLEF-----L 305 (474)
T ss_dssp HHHHHHHHHHHHHHCG---GGGGC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--HHHHHHH-----H
T ss_pred HHHHHHHHHHHHHhCC---CcccC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHH-----H
Confidence 4678888888776532 11122 34555666666666 9999999999999999998644332 3333322 3
Q ss_pred HHHHHHHHhhhcc
Q psy16704 109 DAFSETVKEFDSI 121 (146)
Q Consensus 109 e~Ft~aV~eYD~i 121 (146)
..+.+++..|.++
T Consensus 306 g~~~eAi~~~~~~ 318 (474)
T 4abn_A 306 SRLTSLLESKGKT 318 (474)
T ss_dssp HHHHHHHHHTTTC
T ss_pred HHHHHHHHHhccc
Confidence 4778888888877
No 55
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=54.95 E-value=33 Score=20.85 Aligned_cols=50 Identities=16% Similarity=0.174 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAF 87 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF 87 (146)
..|.+.|++.....-++ -..+..-+.|+.-. +...|...+++-.+.+|..
T Consensus 29 ~~A~~~~~~~~~~~~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 79 (131)
T 2vyi_A 29 EAAVHFYGKAIELNPAN-------AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY 79 (131)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC
Confidence 46888888877654332 23344455555555 8888888888888888865
No 56
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=54.75 E-value=29 Score=24.70 Aligned_cols=61 Identities=10% Similarity=-0.039 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhhcccch-hhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHH
Q psy16704 33 YSLLFYSTGKAATENSLM-KYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREY 93 (146)
Q Consensus 33 A~eiyE~VA~~sl~n~Ll-KysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~ 93 (146)
|.+.|++.....-+++-- +-...+.+..-|.|+... |...|...+++..++||.-...++.
T Consensus 198 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 260 (272)
T 3u4t_A 198 AKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDG 260 (272)
T ss_dssp THHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccHHHHHHH
Confidence 788888887776444422 122334555567777766 9999999999999999998766554
No 57
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=54.35 E-value=45 Score=26.33 Aligned_cols=59 Identities=8% Similarity=-0.041 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHh----------cchhHHHHHHhHHHhcCCCCc
Q psy16704 30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLC----------IDLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~----------~D~v~a~~ale~Y~~~DPsF~ 88 (146)
...|.+.|++..+..-+++-..++...++-+|.+..-. .+...|...+++..+.+|...
T Consensus 394 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 462 (537)
T 3fp2_A 394 FDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSE 462 (537)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCH
Confidence 35788999998888777777777776676666665555 688889999999999999765
No 58
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=54.35 E-value=68 Score=24.64 Aligned_cols=82 Identities=13% Similarity=0.171 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|+++....-++ -..++.-|.|+... +...|...+++-.+.+|..... ...+..+... ..
T Consensus 43 ~~A~~~~~~~l~~~p~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----~~~l~~~~~~--~g 108 (450)
T 2y4t_A 43 ADALSQFHAAVDGDPDN-------YIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAA-----RLQRGHLLLK--QG 108 (450)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHHhCCcc-------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHH-----HHHHHHHHHH--cC
Confidence 57999999887653322 34455556666666 9999999999999999987422 2333333322 23
Q ss_pred HHHHHHHhhhccCCchH
Q psy16704 110 AFSETVKEFDSISRLDQ 126 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD~ 126 (146)
.+.+++.-|++..++++
T Consensus 109 ~~~~A~~~~~~~~~~~~ 125 (450)
T 2y4t_A 109 KLDEAEDDFKKVLKSNP 125 (450)
T ss_dssp CHHHHHHHHHHHHTSCC
T ss_pred CHHHHHHHHHHHHhcCC
Confidence 46677777777666544
No 59
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=53.82 E-value=45 Score=25.27 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|++.....=++ -+++..-|.|+... +...|...+++-.+.+|.... ....+-.+... ..
T Consensus 21 ~~A~~~~~~al~~~p~~-------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~-----~~~~lg~~~~~--~g 86 (281)
T 2c2l_A 21 PEAAACYGRAITRNPLV-------AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVK-----AHFFLGQCQLE--ME 86 (281)
T ss_dssp HHHHHHHHHHHHHCSCC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHH-----HHHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHHhCCcc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH-----HHHHHHHHHHH--cC
Confidence 57888888877753332 35677788888888 999999999999999997642 23333333322 22
Q ss_pred HHHHHHHhhhccCCchH
Q psy16704 110 AFSETVKEFDSISRLDQ 126 (146)
Q Consensus 110 ~Ft~aV~eYD~isrLD~ 126 (146)
.+.+|+..|.+.-++++
T Consensus 87 ~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 87 SYDEAIANLQRAYSLAK 103 (281)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 45566666666555543
No 60
>2hh6_A BH3980 protein; 10176605, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI, unknown; 2.04A {Bacillus halodurans} SCOP: a.69.4.1
Probab=53.72 E-value=61 Score=23.54 Aligned_cols=72 Identities=21% Similarity=0.288 Sum_probs=52.2
Q ss_pred HHhcchhHHHHHHhHHHhcCC-CCccchHHHHHHHHHHHHhh-------------cCHHHHHHHHHhhhccCCchHHHHH
Q psy16704 65 HLCIDLLNCQQALSRYIDLSP-AFQDTREYKFLLKLIESLEE-------------EDSDAFSETVKEFDSISRLDQWYTT 130 (146)
Q Consensus 65 ~L~~D~v~a~~ale~Y~~~DP-sF~~SRE~klL~~LieAve~-------------~D~e~Ft~aV~eYD~isrLD~WKT~ 130 (146)
.|=.|.-.+=+++++|.-... .+.+.-=-.+|.+|++-+|+ .|+.+|.+.+.. +.=+-.|+|+.+
T Consensus 27 ~LP~dY~~ay~~i~~Yl~~~~~~~~g~~~~~il~~lldLfEeaaa~G~~v~eV~G~D~~~Fcdeli~-~~k~~~dk~r~~ 105 (113)
T 2hh6_A 27 ALPKEYHHAYKAIQKYMWTSGGPTDWQDTKRIFGGILDLFEEGAAEGKKVTDLTGEDVAAFCDELMK-DTKTWMDKYRTK 105 (113)
T ss_dssp HSCHHHHHHHHHHHHHHSSTTSBCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHCSCHHHHHHHHHT-TSCBHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHHccCCCCchHHHHHHHHHHHHHHHHHHcCCchHHHhCCCHHHHHHHHHH-hcchHHHHHHHH
Confidence 344499999999999998654 44433333467788877665 589999999988 555556999998
Q ss_pred HHHHHHh
Q psy16704 131 MLLKIKR 137 (146)
Q Consensus 131 mLLkIKk 137 (146)
+-..|.+
T Consensus 106 Ln~~i~~ 112 (113)
T 2hh6_A 106 LNDSIGR 112 (113)
T ss_dssp HHHHHTT
T ss_pred HHHHhhc
Confidence 8766653
No 61
>2o4t_A BH3976 protein; LEFT-handed superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 1.95A {Bacillus halodurans} SCOP: a.69.4.1
Probab=53.35 E-value=13 Score=26.64 Aligned_cols=71 Identities=15% Similarity=0.254 Sum_probs=50.0
Q ss_pred chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhh-------------cCHHHHHHHHHhhhccCCchHHHHHHHHHH
Q psy16704 69 DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEE-------------EDSDAFSETVKEFDSISRLDQWYTTMLLKI 135 (146)
Q Consensus 69 D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~-------------~D~e~Ft~aV~eYD~isrLD~WKT~mLLkI 135 (146)
|.-.+=+++++|.-....+.++-=-.+|.+|++-+|+ .|+.+|.+.+.. ++=+-.|+|+.++-..|
T Consensus 13 dY~~ay~~i~~Yl~~~~~~~g~~~~~il~~lldlfEeaaa~Gk~v~eV~G~D~~~Fcdeli~-~~k~~~dk~r~~Ln~~i 91 (100)
T 2o4t_A 13 DYQIVYKEIQKYLFKVGPVELNEGIGLLSEILGFFEEGAAAGKGVLDVTGTDVAAFCDALIG-DSKTYADLYQESIQQHV 91 (100)
T ss_dssp HHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHCSCHHHHHHHTTS-CSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHcCCchHHHhCCCHHHHHHHHHH-hccchHHHHHHHHHHHH
Confidence 7778888999998865455444334467788776665 589999999888 55455599999988888
Q ss_pred HhhcC
Q psy16704 136 KRQIS 140 (146)
Q Consensus 136 Kk~I~ 140 (146)
.+.+.
T Consensus 92 ~~~~~ 96 (100)
T 2o4t_A 92 DKAMK 96 (100)
T ss_dssp C----
T ss_pred HHHhc
Confidence 77764
No 62
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=52.48 E-value=36 Score=20.50 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAF 87 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF 87 (146)
..|.+.|++..+..-++ .+.++.-+.|+.-. +...|...+++-.+.+|.-
T Consensus 26 ~~A~~~~~~~~~~~~~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 76 (125)
T 1na0_A 26 DEAIEYYQKALELDPNN-------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (125)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHCcCc-------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc
Confidence 57888888877653222 23444445555555 8888888888888888764
No 63
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=50.08 E-value=31 Score=22.73 Aligned_cols=51 Identities=6% Similarity=0.049 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|++.|++.....=++. +.++.-|.|+.-. +...|...+++..+.+|.+.
T Consensus 68 ~~A~~~~~~al~l~P~~~-------~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 68 GLAIIALNHARMLDPKDI-------AVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHCTTCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 578889988877544432 3455666677776 99999999999999999875
No 64
>1eyv_A NUSB protein, N-utilizing substance protein B homolog; helical bundle, structural genomics, PSI, protein structure initiative; 1.60A {Mycobacterium tuberculosis} SCOP: a.79.1.1
Probab=49.60 E-value=25 Score=25.96 Aligned_cols=49 Identities=6% Similarity=0.071 Sum_probs=40.2
Q ss_pred HhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhh
Q psy16704 57 YFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEE 105 (146)
Q Consensus 57 yffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~ 105 (146)
-.|+-|+++|.. |.+-..-+++++.++--.|.+...++|+++++..+..
T Consensus 91 ~iLrla~yel~~~~~iP~~v~InEaVelak~~~~~~~~~fVNgVLr~i~r 140 (156)
T 1eyv_A 91 AILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVML 140 (156)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHcCCCCchhHHHHHHHHHHHhCCCccccchHHHHHHHHH
Confidence 578888888887 7778888888888888888878888999999998754
No 65
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=49.44 E-value=40 Score=20.77 Aligned_cols=51 Identities=6% Similarity=-0.021 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++..+..-++ -+.++.-+.|+... +...|...+++..+.+|...
T Consensus 67 ~~A~~~~~~a~~~~~~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 67 QLALKDCEECIQLEPTF-------IKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHHHHHHHHhCCCc-------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCch
Confidence 57888888877653322 23455666677776 99999999999999999754
No 66
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=49.37 E-value=82 Score=23.76 Aligned_cols=52 Identities=10% Similarity=0.009 Sum_probs=37.3
Q ss_pred HHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcC
Q psy16704 56 EYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEED 107 (146)
Q Consensus 56 eyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D 107 (146)
+..+.-+.+++.. +..+|...+++....+|.+.+..=+.-+-.+.+.....|
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 4455556666666 899999999999999999866555666666666665443
No 67
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=49.09 E-value=62 Score=22.90 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=8.5
Q ss_pred chhHHHHHHhHHHhcCCC
Q psy16704 69 DLLNCQQALSRYIDLSPA 86 (146)
Q Consensus 69 D~v~a~~ale~Y~~~DPs 86 (146)
|...|...+++..+.+|.
T Consensus 123 ~~~~A~~~~~~al~~~~~ 140 (272)
T 3u4t_A 123 NFPLAIQYMEKQIRPTTT 140 (272)
T ss_dssp CHHHHHHHHGGGCCSSCC
T ss_pred CHHHHHHHHHHHhhcCCC
Confidence 444444444444444443
No 68
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=48.38 E-value=65 Score=22.29 Aligned_cols=53 Identities=17% Similarity=0.125 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
.+|.+.|++..+..-+ ++ ..++.-|.|+... |...|...+++..+.+|.....
T Consensus 105 ~~A~~~~~~al~~~p~------~~-~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 158 (198)
T 2fbn_A 105 PKAIDHASKVLKIDKN------NV-KALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDI 158 (198)
T ss_dssp HHHHHHHHHHHHHSTT------CH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHhCcc------cH-HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 5788888887765322 23 3455666777776 9999999999999999987543
No 69
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=47.94 E-value=92 Score=24.29 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
.+|++.|+++.+..=+ +++- +++-|.|+... +...|...+++..+++|.....
T Consensus 213 ~~A~~~~~~al~~~p~------~~~a-~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a 266 (336)
T 1p5q_A 213 SAAIESCNKALELDSN------NEKG-LSRRGEAHLAVNDFELARADFQKVLQLYPNNKAA 266 (336)
T ss_dssp HHHHHHHHHHHHHCTT------CHHH-HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHH
T ss_pred HHHHHHHHHHHHhCCC------cHHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
Confidence 5788999988775433 3344 45556667766 9999999999999999987543
No 70
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=47.26 E-value=34 Score=21.84 Aligned_cols=53 Identities=9% Similarity=0.123 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 32 VYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 32 ~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
+|++.|++..+...++| +--+.++.-|.|+.-. +...|...+++-.+.+|...
T Consensus 8 ~A~~~~~~al~~~~~~p----~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 61 (117)
T 3k9i_A 8 QAVPYYEKAIASGLQGK----DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ 61 (117)
T ss_dssp CCHHHHHHHHSSCCCHH----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcCCCCc----cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch
Confidence 46777777665322222 3345667777787777 99999999999999999984
No 71
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=47.23 E-value=50 Score=24.01 Aligned_cols=102 Identities=17% Similarity=0.073 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHH-HHhhcC
Q psy16704 30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIE-SLEEED 107 (146)
Q Consensus 30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~Lie-Ave~~D 107 (146)
-.+|.+.|+++....-+++- +...-| ..-+.|+.-. +...|...+++..+.+|..... ...+-. ....|+
T Consensus 250 ~~~A~~~~~~~~~~~~~~~~--~~~~~~-~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~ 321 (359)
T 3ieg_A 250 YTDATSKYESVMKTEPSVAE--YTVRSK-ERICHCFSKDEKPVEAIRICSEVLQMEPDNVNA-----LKDRAEAYLIEEM 321 (359)
T ss_dssp HHHHHHHHHHHHHHCCSSHH--HHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCCCchH--HHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHhCcccHHH-----HHHHHHHHHHcCC
Confidence 36888999988887666542 222223 3334455555 8888999899888888876432 222222 234677
Q ss_pred HHHHHHHHHhhhccCCchHHHHHHHHHHHhhc
Q psy16704 108 SDAFSETVKEFDSISRLDQWYTTMLLKIKRQI 139 (146)
Q Consensus 108 ~e~Ft~aV~eYD~isrLD~WKT~mLLkIKk~I 139 (146)
.+.=.+...+--++.+=+..-...|.+++..+
T Consensus 322 ~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 353 (359)
T 3ieg_A 322 YDEAIQDYEAAQEHNENDQQIREGLEKAQRLL 353 (359)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 66666666665566666666666666666554
No 72
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=45.31 E-value=79 Score=22.39 Aligned_cols=18 Identities=0% Similarity=0.015 Sum_probs=12.6
Q ss_pred HHHHHHHHhhhccCCchH
Q psy16704 109 DAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 109 e~Ft~aV~eYD~isrLD~ 126 (146)
..|.+++..|++.-++++
T Consensus 171 ~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 171 TRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HTHHHHHHHHHHHTTTSC
T ss_pred cCHHHHHHHHHHHHHhCC
Confidence 456778888887766655
No 73
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=44.46 E-value=52 Score=20.01 Aligned_cols=99 Identities=9% Similarity=0.097 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchH--HHHHHHHHHHH-hhc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTRE--YKFLLKLIESL-EEE 106 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE--~klL~~LieAv-e~~ 106 (146)
..|.+.|++.....-++ -+.+..-|.|+... +...|...+++-.+.+|...+... ......+..+. ..|
T Consensus 21 ~~A~~~~~~a~~~~~~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 93 (131)
T 1elr_A 21 DTALKHYDKAKELDPTN-------MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEE 93 (131)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCcc-------HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 57888898887654332 24556667777766 999999999999888887643322 23333443333 344
Q ss_pred CHHHHHHHHHhhhccCCc--hHHHHHHHHHHHhhc
Q psy16704 107 DSDAFSETVKEFDSISRL--DQWYTTMLLKIKRQI 139 (146)
Q Consensus 107 D~e~Ft~aV~eYD~isrL--D~WKT~mLLkIKk~I 139 (146)
+ +.+++..|.+.-++ ++.-...+-++.+.+
T Consensus 94 ~---~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 94 K---YKDAIHFYNKSLAEHRTPDVLKKCQQAEKIL 125 (131)
T ss_dssp C---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred c---HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4 44444444443332 333334444444433
No 74
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=44.14 E-value=60 Score=26.88 Aligned_cols=51 Identities=18% Similarity=0.070 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++..+..=++ -+.+..-|.|+... +...|...+++..+.+|...
T Consensus 74 ~~A~~~~~~al~~~p~~-------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 125 (568)
T 2vsy_A 74 AEAAVLLQQASDAAPEH-------PGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEP 125 (568)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 46666666665543222 23445556666666 77788888888777877654
No 75
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=43.89 E-value=54 Score=24.45 Aligned_cols=74 Identities=9% Similarity=-0.029 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHH-HHHHhHHHhcCCCCccchHHHHHHHHHHHHhh
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNC-QQALSRYIDLSPAFQDTREYKFLLKLIESLEE 105 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a-~~ale~Y~~~DPsF~~SRE~klL~~LieAve~ 105 (146)
.+|.+.|++.-..+-+.+ ..+..-..+..-|.|+... +...| ...+++-..+...+.+.+-.+.+..+|.-.|.
T Consensus 213 ~~Al~~~~kal~~~~~~~-~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~~~~~~~~~~~~~~~~~ 288 (293)
T 2qfc_A 213 EESLYQVNKAIEISCRIN-SMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNKISRLEH 288 (293)
T ss_dssp HHHHHHHHHHHHHHHHTT-BCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCcHhhHHHHHHHHHHHhh
Confidence 456666666555443222 2223334455556666665 66666 55555555555555555555555555544443
No 76
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=43.58 E-value=59 Score=22.38 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
..|.+.|++.....-+++ +.+..-+.++... +...|...+++..+.+|...
T Consensus 142 ~~A~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 193 (243)
T 2q7f_A 142 KLALPYLQRAVELNENDT-------EARFQFGMCLANEGMLDEALSQFAAVTEQDPGHA 193 (243)
T ss_dssp HHHHHHHHHHHHHCTTCH-------HHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCccH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH
Confidence 578888888776543332 2334444455555 88888888888888888653
No 77
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=43.30 E-value=95 Score=25.49 Aligned_cols=54 Identities=11% Similarity=0.201 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccch
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTR 91 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SR 91 (146)
..|++.|+++-...=+ +++-| ++-|.|++.. +...|...+++..+++|.....+
T Consensus 334 ~~A~~~~~~al~~~p~------~~~a~-~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 334 TKAVECCDKALGLDSA------NEKGL-YRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHHHHHHHHHHSTT------CHHHH-HHHHHHHHHTTCHHHHHHHHHHHHTTC----CHH
T ss_pred HHHHHHHHHHHhcCCc------cHHHH-HHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 5788888888765433 34444 4556677776 99999999999999999886543
No 78
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=43.01 E-value=45 Score=20.93 Aligned_cols=63 Identities=11% Similarity=0.120 Sum_probs=40.4
Q ss_pred HHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHHhhhccCCch
Q psy16704 56 EYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLD 125 (146)
Q Consensus 56 eyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~eYD~isrLD 125 (146)
+.++.-|.|++-. +...|...+++..+.+|.+.... ..+-.+... ...+.+++..|.+.-+++
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~-----~~lg~~~~~--~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDYVGTY-----YHLGKLYER--LDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHH-----HHHHHHHHH--TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH-----HHHHHHHHH--cCCHHHHHHHHHHHHhhh
Confidence 3455666777777 99999999999999999987532 222222222 233556666666555543
No 79
>3d3b_A Protein NUSB, N utilization substance protein B; NUSB, NUSE, NUT site, phage lambda, lambdan antitermina antitermination; HET: NHE; 1.30A {Escherichia coli} PDB: 3d3c_A 3imq_A 1ey1_A
Probab=42.87 E-value=34 Score=24.49 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=39.2
Q ss_pred HHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHh
Q psy16704 56 EYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE 104 (146)
Q Consensus 56 eyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve 104 (146)
--.|+-|+++|.. |-+-..-+++++.++--.|.+....+|+.+++..+.
T Consensus 84 r~iLrla~yEll~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~ 133 (141)
T 3d3b_A 84 KAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAA 133 (141)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHHHHHHHCCCCchHHHHHHHHHHH
Confidence 3577788888876 667778888888888888888888999999988764
No 80
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=42.56 E-value=78 Score=21.55 Aligned_cols=64 Identities=13% Similarity=0.013 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHH
Q psy16704 33 YSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESL 103 (146)
Q Consensus 33 A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAv 103 (146)
|.+.|++.....=++ -+..+.-|.|+... +...|...+++..+.+|++.+..=+..+-.+....
T Consensus 93 a~~~~~~al~~~P~~-------~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~ 157 (176)
T 2r5s_A 93 ELKRLEQELAANPDN-------FELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSAL 157 (176)
T ss_dssp HHHHHHHHHHHSTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHh
Confidence 456666655433222 23444555666666 99999999999999999987654444455554443
No 81
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=42.54 E-value=70 Score=21.00 Aligned_cols=56 Identities=13% Similarity=-0.084 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPA 86 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPs 86 (146)
.+|++.|++...-.-+++-.....-.-+.+-|.|+... |...|...+++-.+.+|.
T Consensus 59 ~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 57888998887655444433233333456678888888 999998888888887775
No 82
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=42.33 E-value=93 Score=22.36 Aligned_cols=72 Identities=14% Similarity=0.038 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|++.....-++ -+.+..-+.|+... +...|...+++..+.+|+....+.. +...+ ....||.+
T Consensus 253 ~~A~~~~~~a~~~~~~~-------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~--l~~~~-~~~~g~~~ 322 (330)
T 3hym_B 253 AEALDYHRQALVLIPQN-------ASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTM--LGHCI-EMYIGDSE 322 (330)
T ss_dssp HHHHHHHHHHHHHSTTC-------SHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHH--HHHHH-HTTTTC--
T ss_pred HHHHHHHHHHHhhCccc-------hHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHH--HHHHH-HHHhCchh
Confidence 46777777776553222 23344445555555 8888888888888888876433221 22211 12456666
Q ss_pred HHH
Q psy16704 110 AFS 112 (146)
Q Consensus 110 ~Ft 112 (146)
.|.
T Consensus 323 a~~ 325 (330)
T 3hym_B 323 AYI 325 (330)
T ss_dssp ---
T ss_pred ccC
Confidence 554
No 83
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=41.78 E-value=54 Score=22.20 Aligned_cols=53 Identities=11% Similarity=0.039 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
..|.+.|++..+..=++ -+.+..-|.|+... +...|...+++-.+++|...+.
T Consensus 48 ~~A~~~~~~al~~~p~~-------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 101 (150)
T 4ga2_A 48 DLAKKYICTYINVQERD-------PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDL 101 (150)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHH
Confidence 57889999887754443 24555666777777 9999999999999999987543
No 84
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=41.67 E-value=76 Score=21.14 Aligned_cols=102 Identities=10% Similarity=0.064 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHhhcccc-----------hhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSL-----------MKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLK 98 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~L-----------lKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~ 98 (146)
.+|++.|++.....-..+. +.-.--..+++-+.|++-. +...|...+++-.++||..... +..
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a-----~~~ 102 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKA-----LFR 102 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH-----HHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHH-----HHH
Confidence 4788888887665211100 0112235677888899888 9999999999999999987532 222
Q ss_pred HHHHHhhcCHHHHHHHHHhhhccCCchHHHH----HHHHHHHhhc
Q psy16704 99 LIESLEEEDSDAFSETVKEFDSISRLDQWYT----TMLLKIKRQI 139 (146)
Q Consensus 99 LieAve~~D~e~Ft~aV~eYD~isrLD~WKT----~mLLkIKk~I 139 (146)
+-.+... ...|.+++..|.+.-++|+=-. ..|.++++.+
T Consensus 103 ~g~~~~~--~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~ 145 (162)
T 3rkv_A 103 RAKARIA--AWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERR 145 (162)
T ss_dssp HHHHHHH--TTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 2222222 3456788888888777766433 2345555544
No 85
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=41.42 E-value=30 Score=28.59 Aligned_cols=61 Identities=8% Similarity=0.057 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc-----cchHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ-----DTREYKFLLKL 99 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~-----~SRE~klL~~L 99 (146)
.+|..+|++.+...-+ |+.-..+++ |++.. +...|+..++.-...+|.|. ++.-..+|.++
T Consensus 195 q~A~~~f~El~~~~p~-----~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~ 261 (310)
T 3mv2_B 195 TSNFYYYEELSQTFPT-----WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQ 261 (310)
T ss_dssp THHHHHHHHHHTTSCS-----HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-----cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHH
Confidence 4689999997665432 233344454 88888 99999999998888877762 24456666554
No 86
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=41.26 E-value=64 Score=20.16 Aligned_cols=52 Identities=13% Similarity=0.084 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 32 VYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 32 ~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
.|.+.|++..+..=+++ ..++.-|.++... +...|...+++-.+.+|.+...
T Consensus 3 ~a~~~~~~al~~~p~~~-------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 55 (115)
T 2kat_A 3 AITERLEAMLAQGTDNM-------LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVA 55 (115)
T ss_dssp CHHHHHHHHHTTTCCCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHhCCCcH-------HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHH
Confidence 36677777765443332 3455566666666 9999999999999999987543
No 87
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=41.01 E-value=20 Score=27.54 Aligned_cols=75 Identities=8% Similarity=0.086 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhhcccchhhchhHHhHHhH-HHHHhcchhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHH
Q psy16704 32 VYSLLFYSTGKAATENSLMKYNSKEYFFKAG-LCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDA 110 (146)
Q Consensus 32 ~A~eiyE~VA~~sl~n~LlKysaKeyffkA~-LC~L~~D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~ 110 (146)
+|.+.+.+.-++|-++. .+-|.--+|=. .|.|.....--+..+++|... + ..+|++|++.||..+
T Consensus 32 ~A~~~L~~A~~~~~~~~---~~~k~~IL~yLIp~~Ll~G~iP~~~ll~~~~~~--------~---y~~L~~Avr~Gdl~~ 97 (203)
T 3t5x_A 32 QAEEYLSFAFEHCHRSS---QKNKRMILIYLLPVKMLLGHMPTVELLKKYHLM--------Q---FAEVTRAVSEGNLLL 97 (203)
T ss_dssp HHHHHHHHHHHHSCTTC---HHHHHHHHHHHHHHHHHTTCEECHHHHHHTTCG--------G---GHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHCCHhH---HHHHHHHHHHHHHHHHHcCCCCCHHHhhhCchh--------H---HHHHHHHHHhCCHHH
Confidence 45555555555544332 22233333333 255555224445555665321 1 348999999999999
Q ss_pred HHHHHHhhhc
Q psy16704 111 FSETVKEFDS 120 (146)
Q Consensus 111 Ft~aV~eYD~ 120 (146)
|.+++.++..
T Consensus 98 f~~~l~~~~~ 107 (203)
T 3t5x_A 98 LHEALAKHEA 107 (203)
T ss_dssp HHHHHHHTHH
T ss_pred HHHHHHHhHH
Confidence 9999998853
No 88
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=40.91 E-value=59 Score=19.65 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++.....-++ -+.++..|.|+... |...|...+++..+.+|...
T Consensus 63 ~~A~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 114 (131)
T 2vyi_A 63 AGAVQDCERAICIDPAY-------SKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNE 114 (131)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHhcCccC-------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccch
Confidence 46777777776643322 23455666666666 88889999988888888654
No 89
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=40.50 E-value=1.1e+02 Score=23.67 Aligned_cols=58 Identities=12% Similarity=0.052 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHH
Q psy16704 30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYK 94 (146)
Q Consensus 30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~k 94 (146)
-..|.+.|++.....-++ . +.+..-+.|+... |...|...+++..+.+|+.....+..
T Consensus 431 ~~~A~~~~~~a~~~~~~~------~-~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 489 (514)
T 2gw1_A 431 FIEATNLLEKASKLDPRS------E-QAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAI 489 (514)
T ss_dssp HHHHHHHHHHHHHHCTTC------H-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccc------H-HHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHH
Confidence 357888888876643222 2 3344455555555 99999999999999999876555443
No 90
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=40.49 E-value=41 Score=22.83 Aligned_cols=81 Identities=11% Similarity=0.050 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHH
Q psy16704 32 VYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDA 110 (146)
Q Consensus 32 ~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~ 110 (146)
.|++.|++.....=+++.. .+.=|-|+.-. |...|...+++..+++|......- .+-.+... ...
T Consensus 15 ~ai~~~~~a~~~~p~~~~~-------~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~-----~lg~~~~~--~~~ 80 (150)
T 4ga2_A 15 RYIASVQGSTPSPRQKSIK-------GFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHR-----FLGLLYEL--EEN 80 (150)
T ss_dssp HHHHHHHHHSCSHHHHHTT-------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH-----HHHHHHHH--TTC
T ss_pred HHHHHHHHhcccCcccHHH-------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHH--cCc
Confidence 4566666554443333322 23345666666 999999999999999999864332 12122211 223
Q ss_pred HHHHHHhhhccCCchH
Q psy16704 111 FSETVKEFDSISRLDQ 126 (146)
Q Consensus 111 Ft~aV~eYD~isrLD~ 126 (146)
+.+++..|.+.-++|+
T Consensus 81 ~~~A~~~~~~al~~~p 96 (150)
T 4ga2_A 81 TDKAVECYRRSVELNP 96 (150)
T ss_dssp HHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHhCC
Confidence 5566666666655554
No 91
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=39.92 E-value=1e+02 Score=22.14 Aligned_cols=89 Identities=11% Similarity=0.021 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhhc--ccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcC
Q psy16704 31 IVYSLLFYSTGKAATE--NSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEED 107 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~--n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D 107 (146)
.+|.+.|++..+..-+ ++...-.--+.+..-|.|+... +...|...+++..+.+|..... ...+..+...
T Consensus 210 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~-----~~~la~~~~~-- 282 (330)
T 3hym_B 210 KTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAST-----YSAIGYIHSL-- 282 (330)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHH-----HHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHH-----HHHHHHHHHH--
Confidence 4678888877665422 1111111123555666666666 9999999999999999985432 2333333322
Q ss_pred HHHHHHHHHhhhccCCchH
Q psy16704 108 SDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 108 ~e~Ft~aV~eYD~isrLD~ 126 (146)
...+.+++.-|.+.-++++
T Consensus 283 ~g~~~~A~~~~~~al~~~p 301 (330)
T 3hym_B 283 MGNFENAVDYFHTALGLRR 301 (330)
T ss_dssp HTCHHHHHHHHHTTTTTCS
T ss_pred hccHHHHHHHHHHHHccCC
Confidence 2346678888888777765
No 92
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=39.92 E-value=1.2e+02 Score=23.56 Aligned_cols=89 Identities=12% Similarity=0.100 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHhhcccchh--------hchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMK--------YNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIE 101 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlK--------ysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~Lie 101 (146)
..|++.|++.....-+++-.. -..-..+++-+.|++-. +...|...+++-.+++|.... .+..+-.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~-----a~~~lg~ 238 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEK-----GLSRRGE 238 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----HHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-----HHHHHHH
Confidence 578999998877655443110 00125667788888888 999999999999999998642 2233333
Q ss_pred HHhhcCHHHHHHHHHhhhccCCchH
Q psy16704 102 SLEEEDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 102 Ave~~D~e~Ft~aV~eYD~isrLD~ 126 (146)
+... ...|.+|+..|.+.-++++
T Consensus 239 ~~~~--~g~~~~A~~~~~~al~l~P 261 (336)
T 1p5q_A 239 AHLA--VNDFELARADFQKVLQLYP 261 (336)
T ss_dssp HHHH--TTCHHHHHHHHHHHHHHCS
T ss_pred HHHH--CCCHHHHHHHHHHHHHHCC
Confidence 3222 2345666666666555553
No 93
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=39.12 E-value=76 Score=20.39 Aligned_cols=51 Identities=14% Similarity=0.053 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
..|.+.|++.....-++ -+.+..-|.|+.-. +...|...+++-.+.+|...
T Consensus 30 ~~A~~~~~~al~~~~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~ 81 (166)
T 1a17_A 30 ENAIKFYSQAIELNPSN-------AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI 81 (166)
T ss_dssp HHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCC-------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH
Confidence 56888888877654333 34556667777777 99999999999999999753
No 94
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=38.71 E-value=59 Score=21.83 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccch
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTR 91 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SR 91 (146)
..|.+.|++.....-++. +.+..-|.|+.-. +...|...+++..+.+|......
T Consensus 90 ~~a~~~~~~a~~~~~~~~-------~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 90 QAAIDALQRAIALNTVYA-------DAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHHHHHHHHHHHHCTTCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhCccch-------HHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHH
Confidence 456666766655433322 3344456666666 88888888888888888887543
No 95
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=38.29 E-value=67 Score=26.80 Aligned_cols=93 Identities=12% Similarity=0.042 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHH
Q psy16704 32 VYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDA 110 (146)
Q Consensus 32 ~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~ 110 (146)
.|++.|-++-...-...+. +..+..+.++||.+++ +..+.+..+-.=.+..+-.....+..-+.+++.++.+++...
T Consensus 226 ~Aa~~f~e~~~t~~~~e~~--~~~~~~~y~~l~al~~~~r~~l~~~v~~~~~~~~~l~~~p~~~~~~~l~~~~~~~~~~~ 303 (429)
T 4b4t_R 226 EAAKLLVDSLATFTSIELT--SYESIATYASVTGLFTLERTDLKSKVIDSPELLSLISTTAALQSISSLTISLYASDYAS 303 (429)
T ss_dssp HHHHHHHHHHHHSCCSCHH--HHHHHHHHHHHHHHHTTCHHHHHHSSSSSHHHHHGGGSHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHhccCCccchh--hHHHHHHHHHHHHHhcCCHHHHHHHHhcCHHHHhhccCChhHHHHHHHHHHHHhccHHH
Confidence 4555554444444444443 4567889999999997 766655433111111111133446667888999998888888
Q ss_pred HHHH-HHhhhccCCchH
Q psy16704 111 FSET-VKEFDSISRLDQ 126 (146)
Q Consensus 111 Ft~a-V~eYD~isrLD~ 126 (146)
|.+. ...++..-..|.
T Consensus 304 ~~~~~l~~~~~~l~~d~ 320 (429)
T 4b4t_R 304 YFPYLLETYANVLIPCK 320 (429)
T ss_dssp HHHHHHHHHSTTTTTCT
T ss_pred HHHHHHHHHHhhhccCH
Confidence 7665 456666655553
No 96
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=37.24 E-value=1.3e+02 Score=22.50 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHH-hhcCH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESL-EEEDS 108 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAv-e~~D~ 108 (146)
.+|.+.|++.-...-++ -+.+..-|.|+... +...|...+++-.+.+|.... ....+..+. ..|
T Consensus 82 ~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----~~~~l~~~~~~~g-- 147 (365)
T 4eqf_A 82 PVTILFMEAAILQDPGD-------AEAWQFLGITQAENENEQAAIVALQRCLELQPNNLK-----ALMALAVSYTNTS-- 147 (365)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----HHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHhCcCC-------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHH-----HHHHHHHHHHccc--
Confidence 57899999887754333 24455666666666 999999999999999997643 233333333 233
Q ss_pred HHHHHHHHhhhccCCchH
Q psy16704 109 DAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 109 e~Ft~aV~eYD~isrLD~ 126 (146)
.+.+++.-|.+.-++++
T Consensus 148 -~~~~A~~~~~~al~~~p 164 (365)
T 4eqf_A 148 -HQQDACEALKNWIKQNP 164 (365)
T ss_dssp -CHHHHHHHHHHHHHHCH
T ss_pred -cHHHHHHHHHHHHHhCc
Confidence 34556665555544443
No 97
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=36.86 E-value=79 Score=26.00 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhh---c
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEE---E 106 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~---~ 106 (146)
.+|.+.|++..+..=++ -+.+..-|.|+... |...|...+++-.+.+|. . ..+..+-.+... +
T Consensus 120 ~~A~~~~~~al~~~p~~-------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~-----~~~~~lg~~~~~~~~~ 186 (474)
T 4abn_A 120 PEAEVLLSKAVKLEPEL-------VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-K-----VSLQNLSMVLRQLQTD 186 (474)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-H-----HHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-H-----HHHHHHHHHHHHhccC
Confidence 67888888776653322 24555666777777 999999999999999988 1 334444444433 2
Q ss_pred CH----HHHHHHHHhhhccCCchH
Q psy16704 107 DS----DAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 107 D~----e~Ft~aV~eYD~isrLD~ 126 (146)
+. ..+.+++..|.+.-++|+
T Consensus 187 ~~~~~~g~~~~A~~~~~~al~~~p 210 (474)
T 4abn_A 187 SGDEHSRHVMDSVRQAKLAVQMDV 210 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred ChhhhhhhHHHHHHHHHHHHHhCC
Confidence 22 677778887777655554
No 98
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=35.49 E-value=1.4e+02 Score=24.78 Aligned_cols=51 Identities=14% Similarity=0.053 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++..+..=++ -+.+..-|.|+... +...|...+++-.+++|...
T Consensus 23 ~~A~~~~~~Al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 74 (477)
T 1wao_1 23 ENAIKFYSQAIELNPSN-------AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI 74 (477)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHHHhCCcc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH
Confidence 35667777666543222 34455556666665 77777777777777777653
No 99
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=35.35 E-value=1e+02 Score=23.52 Aligned_cols=60 Identities=8% Similarity=0.032 Sum_probs=34.6
Q ss_pred HHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHHhhhccCCchH
Q psy16704 62 GLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 62 ~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~eYD~isrLD~ 126 (146)
+-+++-. +...|...+++..+.+|... ...+....+.... ..+.+.+++.-|+++...++
T Consensus 137 ~~~~~~~g~~~~A~~~l~~~~~~~p~~~---~~~l~~a~~~l~~--~~~~~~eA~~~~~~~l~~~p 197 (291)
T 3mkr_A 137 VQILLKLDRLDLARKELKKMQDQDEDAT---LTQLATAWVSLAA--GGEKLQDAYYIFQEMADKCS 197 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHH--CTTHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcCcH---HHHHHHHHHHHHh--CchHHHHHHHHHHHHHHhCC
Confidence 3344444 88888888888888887642 2333333333222 23566667777766655544
No 100
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=34.83 E-value=1.1e+02 Score=23.57 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++..+..-++ + ..+..-+.|+... +...|...+++-.+.+|...
T Consensus 77 ~~A~~~~~~al~~~p~~------~-~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 77 KAALPDLTKVIQLKMDF------T-AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHHHHHHHCTTC------H-HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHhcCCCc------H-HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 67889999887654332 2 3444455555555 99999999999999999865
No 101
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.51 E-value=86 Score=19.67 Aligned_cols=53 Identities=11% Similarity=-0.006 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAF 87 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF 87 (146)
..|.+.|++..+..-+++. .-..+..-+.|+.-. +...|...+++..+.+|..
T Consensus 45 ~~A~~~~~~a~~~~~~~~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 45 GGALAAYTQALGLDATPQD----QAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp HHHHHHHHHHHTSCCCHHH----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHcccchH----HHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC
Confidence 4688888887654332211 135566667777777 9999999999999999976
No 102
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=34.50 E-value=86 Score=19.68 Aligned_cols=50 Identities=14% Similarity=0.045 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAF 87 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF 87 (146)
..|.+.|++..+..-+ ++ +.++.-|.|+... +...|...+++..+.+|.-
T Consensus 60 ~~A~~~~~~al~~~p~------~~-~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 60 EQALADCRRALELDGQ------SV-KAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHHHHHHHHHHHHCTT------CH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCch------hH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 5788889888775433 22 3455566677766 9999999999999888873
No 103
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=34.40 E-value=18 Score=25.51 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=25.1
Q ss_pred CCCccchHHHHHHHHHHHHhhcCHHHHHHHHH
Q psy16704 85 PAFQDTREYKFLLKLIESLEEEDSDAFSETVK 116 (146)
Q Consensus 85 PsF~~SRE~klL~~LieAve~~D~e~Ft~aV~ 116 (146)
-.|++....++++...+|++.+|.+.+.+.+.
T Consensus 15 ~~~~~~~~~~lv~~~~~a~~~~D~~~l~~l~a 46 (151)
T 3f7x_A 15 LYFQGMTATELVNAYYAAFNAGDMPAFLALLS 46 (151)
T ss_dssp ----CCCHHHHHHHHHHHHHHTCHHHHHHTEE
T ss_pred ceecCHHHHHHHHHHHHHHHcCCHHHHHHhcC
Confidence 45888899999999999999999999887653
No 104
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=33.77 E-value=90 Score=27.14 Aligned_cols=24 Identities=8% Similarity=0.039 Sum_probs=21.9
Q ss_pred HHHHHHHhhcCHHHHHHHHHhhhc
Q psy16704 97 LKLIESLEEEDSDAFSETVKEFDS 120 (146)
Q Consensus 97 ~~LieAve~~D~e~Ft~aV~eYD~ 120 (146)
..|+.|+..||..+|.+++.++..
T Consensus 300 ~~L~~AVr~Gdl~~F~~~L~~~~~ 323 (455)
T 3t5v_B 300 SVLYKHVRYGNIQGVSLWLRQNER 323 (455)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHhHH
Confidence 479999999999999999998865
No 105
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=33.39 E-value=1.2e+02 Score=21.59 Aligned_cols=32 Identities=13% Similarity=0.003 Sum_probs=18.3
Q ss_pred HHHHHhc-chhHHHHHHhHHHhcCCCCccchHH
Q psy16704 62 GLCHLCI-DLLNCQQALSRYIDLSPAFQDTREY 93 (146)
Q Consensus 62 ~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~ 93 (146)
|.+++-. +...|...+++..+.+|.-....|.
T Consensus 154 a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 186 (225)
T 2yhc_A 154 AEYYTERGAWVAVVNRVEGMLRDYPDTQATRDA 186 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHH
Confidence 4444444 6666666666666666666544443
No 106
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=33.17 E-value=88 Score=23.26 Aligned_cols=88 Identities=6% Similarity=-0.025 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHhhccc------chhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhc-------CCCCccchHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENS------LMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDL-------SPAFQDTREYKFL 96 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~------LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~-------DPsF~~SRE~klL 96 (146)
.+|++.|++.-+-.=+++ .-.+.+ ..+.+-|.|..-. +...|-...++=.++ +|.+. +..
T Consensus 28 eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a-~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~-----~A~ 101 (159)
T 2hr2_A 28 DEAAANCRRAMEISHTMPPEEAFDHAGFDA-FCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEG-----KLW 101 (159)
T ss_dssp HHHHHHHHHHHHHHTTSCTTSCCCHHHHHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHH-----HHH
T ss_pred HHHHHHHHHHHhhCCCCcchhhhhhccchH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchH-----HHH
Confidence 479999999887765532 111111 2677778888877 888888888888888 99753 222
Q ss_pred ----HHHHHHHhhcCHHHHHHHHHhhhccCCchH
Q psy16704 97 ----LKLIESLEEEDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 97 ----~~LieAve~~D~e~Ft~aV~eYD~isrLD~ 126 (146)
...-.|. .....|.+++..|++...+++
T Consensus 102 ~~~~~~rG~aL--~~lgr~eEAl~~y~kAlel~p 133 (159)
T 2hr2_A 102 ISAVYSRALAL--DGLGRGAEAMPEFKKVVEMIE 133 (159)
T ss_dssp HHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHH--HHCCCHHHHHHHHHHHHhcCC
Confidence 2222222 235678899999998777765
No 107
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=32.54 E-value=84 Score=23.28 Aligned_cols=54 Identities=7% Similarity=0.075 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccch
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTR 91 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SR 91 (146)
.+|.+.|++.....-++ .+.+..-+.|+... +...|...+++..+.+|......
T Consensus 115 ~~A~~~~~~al~~~~~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 115 LLAISALRRCLELKPDN-------QTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred HHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 35666676665543222 23444445555555 77777777777777777765444
No 108
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=32.41 E-value=78 Score=18.59 Aligned_cols=54 Identities=11% Similarity=-0.061 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHh-cchhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLC-IDLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~-~D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++.-+..-+ .....-++..|.++.-. .+...|...+++..+.+|+-.
T Consensus 57 ~~A~~~~~~a~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 57 EEAVDCYNYVINVIED----EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHHHHHHHHTSCC----TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHHHHHhCcc----cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 5788888887654322 22344455555555555 688999999999999998753
No 109
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=30.78 E-value=38 Score=24.33 Aligned_cols=22 Identities=9% Similarity=0.345 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhhcCHHHHHHHH
Q psy16704 94 KFLLKLIESLEEEDSDAFSETV 115 (146)
Q Consensus 94 klL~~LieAve~~D~e~Ft~aV 115 (146)
++++.+++|+.+||.+.+...+
T Consensus 16 ~~~~~~~~Ai~~gD~~~~~~l~ 37 (143)
T 2f86_B 16 RVTQTLLDAISCKDFETYTRLC 37 (143)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHE
T ss_pred HHHHHHHHHHHccCHHHHHHhc
Confidence 6788999999999999998654
No 110
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=28.76 E-value=63 Score=26.62 Aligned_cols=76 Identities=11% Similarity=0.126 Sum_probs=49.1
Q ss_pred hHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCC--C-ccchHHHHHHHHHHHHhhcCHHHHHHHHHhhhccCCchH-HHH
Q psy16704 55 KEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPA--F-QDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQ-WYT 129 (146)
Q Consensus 55 KeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPs--F-~~SRE~klL~~LieAve~~D~e~Ft~aV~eYD~isrLD~-WKT 129 (146)
=|-...++-|+|-. ....|++.++++++.+|. + .++-=..+.+.-+.....| +++.++..-|+.++.-.+ |++
T Consensus 136 lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~--~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 136 TELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNK--ETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTC--STTTHHHHHHHHHHTTSCSHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCC--ccHHHHHHHHHHHHHhCCCccc
Confidence 34445555566666 899999999999999883 3 2333344445555555555 457777777777766555 877
Q ss_pred HHH
Q psy16704 130 TML 132 (146)
Q Consensus 130 ~mL 132 (146)
+-+
T Consensus 214 ~~l 216 (310)
T 3mv2_B 214 QLG 216 (310)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 111
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=28.63 E-value=1.8e+02 Score=21.64 Aligned_cols=91 Identities=12% Similarity=0.025 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccch--HHHHHHHHHHHH-hhcC
Q psy16704 32 VYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTR--EYKFLLKLIESL-EEED 107 (146)
Q Consensus 32 ~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SR--E~klL~~LieAv-e~~D 107 (146)
.|++.|++...-.-+++- ...+-+.+.+-|.++... +...|...+++-.+.+|.-...+ ....+..+..+. ..||
T Consensus 136 ~A~~~~~~Al~~~~~~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 214 (292)
T 1qqe_A 136 KAIDCYELAGEWYAQDQS-VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATD 214 (292)
T ss_dssp HHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCC
Confidence 577777776655443321 123345567778888877 99999999999999999876542 333444443333 3454
Q ss_pred HHHHHHHHHhhhccCCchH
Q psy16704 108 SDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 108 ~e~Ft~aV~eYD~isrLD~ 126 (146)
+.+++..|++.-.+|+
T Consensus 215 ---~~~A~~~~~~al~l~p 230 (292)
T 1qqe_A 215 ---AVAAARTLQEGQSEDP 230 (292)
T ss_dssp ---HHHHHHHHHGGGCC--
T ss_pred ---HHHHHHHHHHHHhhCC
Confidence 4566666666655544
No 112
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=28.59 E-value=1.2e+02 Score=19.45 Aligned_cols=50 Identities=14% Similarity=0.001 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAF 87 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF 87 (146)
.+|.+.|++..+..-++ . +.+..-+.++... +...|...+++..+.+|..
T Consensus 59 ~~A~~~~~~~~~~~~~~------~-~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 109 (186)
T 3as5_A 59 DRGTELLERSLADAPDN------V-KVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN 109 (186)
T ss_dssp HHHHHHHHHHHHHCTTC------H-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhcCCCC------H-HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh
Confidence 46667777665543222 1 2233334444444 7777777777776666653
No 113
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=28.44 E-value=2e+02 Score=21.99 Aligned_cols=97 Identities=8% Similarity=-0.004 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHH--HHHHHHHH-HHhhc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREY--KFLLKLIE-SLEEE 106 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~--klL~~Lie-Ave~~ 106 (146)
.+|.++++++-..+-...=-..-+ +.++.-+-+++.. |...|+..+++-....|+..+.... .+...+.. ...++
T Consensus 152 ~~A~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (434)
T 4b4t_Q 152 KDSLALINDLLREFKKLDDKPSLV-DVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDK 230 (434)
T ss_dssp HHHHHHHHHHHHHHTTSSCSTHHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 367777777665544433222223 4445555555555 9999999999888887777654332 22222111 12334
Q ss_pred CH----HHHHHHHHhhhccCCchHHH
Q psy16704 107 DS----DAFSETVKEFDSISRLDQWY 128 (146)
Q Consensus 107 D~----e~Ft~aV~eYD~isrLD~WK 128 (146)
|. ..|.++...|+....-+.|.
T Consensus 231 ~y~~A~~~~~~a~~~~~~~~~~~~~~ 256 (434)
T 4b4t_Q 231 DYKTAFSYFFESFESYHNLTTHNSYE 256 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTSSCHH
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhHH
Confidence 43 34666777777766555443
No 114
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=28.18 E-value=1.2e+02 Score=25.31 Aligned_cols=77 Identities=5% Similarity=0.040 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD 109 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e 109 (146)
.+|.+.|++..+..-+ ++ +.+.+-|.++... +...|...+++..+.+|.....+.. +..+....+ ..
T Consensus 57 ~~A~~~~~~al~l~p~------~~-~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~--l~~~~~~~~---~g 124 (477)
T 1wao_1 57 GYALGDATRAIELDKK------YI-KGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMK--YQECNKIVK---QK 124 (477)
T ss_dssp HHHHHHHHHHHHSCTT------CH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHH--HHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHhCCC------CH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHHH---HH
Confidence 5788888887654222 23 3445566777777 9999999999999999987654432 222211222 35
Q ss_pred HHHHHHHhhh
Q psy16704 110 AFSETVKEFD 119 (146)
Q Consensus 110 ~Ft~aV~eYD 119 (146)
.|.+|+.-|+
T Consensus 125 ~~~~A~~~~~ 134 (477)
T 1wao_1 125 AFERAIAGDE 134 (477)
T ss_dssp HHCCC-----
T ss_pred HHHHHhcccc
Confidence 6666766666
No 115
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=27.62 E-value=89 Score=24.60 Aligned_cols=56 Identities=23% Similarity=0.284 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPA 86 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPs 86 (146)
..|.+.|+++....-+++-...+.-.-+...|.|+... |...|...+++-.+.+|.
T Consensus 219 ~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~ 275 (537)
T 3fp2_A 219 TKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT 275 (537)
T ss_dssp HHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC
Confidence 45666666665555444433333333344444455444 666666666666666665
No 116
>2asr_A Aspartate receptor; chemotaxis; 2.30A {Escherichia coli} SCOP: a.24.2.1
Probab=27.07 E-value=1.4e+02 Score=19.85 Aligned_cols=44 Identities=18% Similarity=0.376 Sum_probs=30.3
Q ss_pred chhHHHHHHhHHHhcCCCCccchH------------HHHHHHHHHHHhhcCHHHHHH
Q psy16704 69 DLLNCQQALSRYIDLSPAFQDTRE------------YKFLLKLIESLEEEDSDAFSE 113 (146)
Q Consensus 69 D~v~a~~ale~Y~~~DPsF~~SRE------------~klL~~LieAve~~D~e~Ft~ 113 (146)
-...++..++.|...-++ +..++ ..-|..+++++++||.+.|.+
T Consensus 59 ~l~~a~~~~~~y~~~~~~-~~~~~l~~~l~~~y~~~~~~l~~~~~~l~~~~~~~~~~ 114 (142)
T 2asr_A 59 TLAQAATHYKKFKSMAPL-PEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFA 114 (142)
T ss_dssp HHHHHHHHHHHHHHSCCC-GGGHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHh
Confidence 566788889999988751 11111 013777888899999998863
No 117
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=26.63 E-value=1.1e+02 Score=18.30 Aligned_cols=52 Identities=10% Similarity=0.079 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCcc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQD 89 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~ 89 (146)
.+|.+.|++.....-++ ...++.-+.|+... +...|...+++..+.+|.-..
T Consensus 52 ~~A~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 104 (136)
T 2fo7_A 52 DEAIEYYQKALELDPRS-------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 104 (136)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHCCCc-------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChH
Confidence 57888999877654322 23444556666666 999999999999999998853
No 118
>2w3l_A BCL2-XL, apoptosis regulator BCL-2; HET: DRO; 2.10A {Homo sapiens} PDB: 2o2f_A*
Probab=26.18 E-value=68 Score=23.17 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=39.8
Q ss_pred HHhcchhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHHhhh
Q psy16704 65 HLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFD 119 (146)
Q Consensus 65 ~L~~D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~eYD 119 (146)
.||.|.+.-+-.-.-|....|. ..++....|..+.+-+|......|.+.+...+
T Consensus 5 ~L~~dyi~~~l~~~g~~~~~~~-~p~~~~~~Lr~~gdele~~~~~~f~~~~~~l~ 58 (144)
T 2w3l_A 5 EIVMKYIHYKLSQRGYEWDAGA-DSEVVHKTLREAGDDFSRRYRRDFAEMSSGLH 58 (144)
T ss_dssp HHHHHHHHHHHHHTTCCCCC----CHHHHHHHHHHHHHHHHHTHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCCCCCcCCC-cccHHHHHHHHHHHHHHHHhHHHHHHHHHHcC
Confidence 3566777766666555433332 56899999999999999999999999988874
No 119
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=26.17 E-value=1.6e+02 Score=20.03 Aligned_cols=51 Identities=10% Similarity=-0.035 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++.....-++ + +.++.-|.|+... +...|...+++..+.+|.-.
T Consensus 54 ~~A~~~~~~al~~~~~~------~-~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 54 TEAEKAFTRSINRDKHL------A-VAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHHHHHHHHHCTTC------H-HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHHHHHhCccc------h-HHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 57888888776653222 2 3455566677766 88899999999888888744
No 120
>3do9_A UPF0302 protein BA_1542/GBAA1542/BAS1430; uncharacterized protein, structural genomics, protein structure initiative, PSI; 2.75A {Bacillus anthracis}
Probab=25.87 E-value=71 Score=24.85 Aligned_cols=32 Identities=25% Similarity=0.441 Sum_probs=27.8
Q ss_pred cchHHHHHHHHHHHHhhcCHHHHHHHHHhhhc
Q psy16704 89 DTREYKFLLKLIESLEEEDSDAFSETVKEFDS 120 (146)
Q Consensus 89 ~SRE~klL~~LieAve~~D~e~Ft~aV~eYD~ 120 (146)
..|..+|++.|=+|.+++|.|.|..-..+|.-
T Consensus 148 ~~~~~~L~~~ID~ALd~~D~e~F~~Lt~~L~~ 179 (188)
T 3do9_A 148 SFRRERLLKQIDEALDKQDKEAFHRLTAELKM 179 (188)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46788999999999999999999998887753
No 121
>3sxm_A Transcriptional regulator, GNTR family; transcription factor, metal-binding, structur genomics, PSI-2, protein structure initiative; 1.55A {Thermotoga maritima} PDB: 3sxk_A 3sxz_A
Probab=25.75 E-value=56 Score=21.96 Aligned_cols=65 Identities=12% Similarity=0.045 Sum_probs=38.7
Q ss_pred hchhHHhHHhHHHHHhc-ch-----hHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHHhh
Q psy16704 52 YNSKEYFFKAGLCHLCI-DL-----LNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEF 118 (146)
Q Consensus 52 ysaKeyffkA~LC~L~~-D~-----v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~eY 118 (146)
|..-|.=|-..|+..|. .. ......+.+|.. .|.- ..+=..-=..|++|+++||.++-..++.+.
T Consensus 55 ~~~~d~~FH~~i~~~s~N~~l~~~~~~l~~~~~~~~~-~~~~-~~~~~~eH~~I~~Ai~~~D~~~A~~~~~~H 125 (140)
T 3sxm_A 55 FDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVRH-LNER-YVVSNREHKELIERIISGDKEGAIEKLKEH 125 (140)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHT-TSCC-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHc-Cccc-hhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 55566667777777774 21 122333444544 3322 111122346799999999999988887753
No 122
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=25.44 E-value=2.1e+02 Score=21.28 Aligned_cols=51 Identities=14% Similarity=0.098 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|++..+..-+++ +.+..-|.|+... +...|...+++-.+.+|...
T Consensus 230 ~~A~~~~~~al~~~p~~~-------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 281 (365)
T 4eqf_A 230 NRAIDAFNAALTVRPEDY-------SLWNRLGATLANGDRSEEAVEAYTRALEIQPGFI 281 (365)
T ss_dssp HHHHHHHHHHHHHCTTCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch
Confidence 578888888776543332 2334444455545 88888888888888888763
No 123
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=25.26 E-value=1.1e+02 Score=18.17 Aligned_cols=62 Identities=8% Similarity=-0.018 Sum_probs=40.7
Q ss_pred hHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHHhhhccCCchH
Q psy16704 58 FFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 58 ffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~eYD~isrLD~ 126 (146)
++.-|.+++-. |...|...+++-.+.+|.... ....+-.+... ...+.+++..|++.-++++
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----~~~~lg~~~~~--~g~~~~A~~~~~~al~~~p 69 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQNPV-----GYSNKAMALIK--LGEYTQAIQMCQQGLRYTS 69 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH-----HHHHHHHHHHH--TTCHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH-----HHHHHHHHHHH--hcCHHHHHHHHHHHHHhCC
Confidence 44556677776 999999999999999998642 23344433322 2346677777777666654
No 124
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A
Probab=24.83 E-value=73 Score=24.58 Aligned_cols=48 Identities=17% Similarity=0.106 Sum_probs=35.6
Q ss_pred hHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHHhh
Q psy16704 71 LNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEF 118 (146)
Q Consensus 71 v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~eY 118 (146)
...+.+++++.+.-+.-.-.+.........+|++++|.+.|-+.+.+.
T Consensus 211 ~~t~~~v~~v~~~~~~~~~~~~~~~~~~~~~aL~~~d~~~lg~lm~~~ 258 (335)
T 3gon_A 211 AVSSHMVQQIKQNINQNFLTSSKETVVSLVEALEQGKSEKIIEQVEVA 258 (335)
T ss_dssp CCHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 356677777766544433456667788999999999999999888764
No 125
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=24.74 E-value=2.7e+02 Score=22.24 Aligned_cols=89 Identities=8% Similarity=0.154 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHhhccc-------c--hhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENS-------L--MKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLI 100 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~-------L--lKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~Li 100 (146)
.+|++.|++..+..-+++ . +.-.--..+.+-+.|++-. +...|...+++-.+++|... +.+..+-
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~-----~a~~~lg 314 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNT-----KALYRRA 314 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH-----HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhH-----HHHHHHH
Confidence 468888887766322211 0 1112235567777888877 99999999999999999643 2333333
Q ss_pred HHHhhcCHHHHHHHHHhhhccCCchH
Q psy16704 101 ESLEEEDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 101 eAve~~D~e~Ft~aV~eYD~isrLD~ 126 (146)
.+.... ..+.+|+..|.+.-++++
T Consensus 315 ~~~~~~--g~~~eA~~~l~~Al~l~P 338 (370)
T 1ihg_A 315 QGWQGL--KEYDQALADLKKAQEIAP 338 (370)
T ss_dssp HHHHHT--TCHHHHHHHHHHHHHHCT
T ss_pred HHHHHc--cCHHHHHHHHHHHHHhCC
Confidence 333322 346677777777666654
No 126
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=24.44 E-value=31 Score=27.47 Aligned_cols=41 Identities=12% Similarity=0.315 Sum_probs=25.6
Q ss_pred HHHHHHhHHHhcCCCCccch-----HHHHHHHHHHHHhhcCHHHHH
Q psy16704 72 NCQQALSRYIDLSPAFQDTR-----EYKFLLKLIESLEEEDSDAFS 112 (146)
Q Consensus 72 ~a~~ale~Y~~~DPsF~~SR-----E~klL~~LieAve~~D~e~Ft 112 (146)
.+..++.+-...||+|..+. +.-++..+++|...||.+...
T Consensus 60 e~a~~l~~Ik~~DPsF~~~~Fl~~a~~ai~p~Il~Af~~GD~~~Lk 105 (222)
T 3qk9_A 60 ESSRVYSQFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLK 105 (222)
T ss_dssp CCHHHHTTCC-----CCHHHHHHHHHHTHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 45678899999999996432 223466799999999987543
No 127
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=24.32 E-value=65 Score=22.85 Aligned_cols=49 Identities=20% Similarity=0.104 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCC
Q psy16704 29 FRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAF 87 (146)
Q Consensus 29 ~~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF 87 (146)
=-.+|+..|++.|..+=+. -+|+.+.|.+. ...-+..-++=-...||.+
T Consensus 29 ~EleAI~~Y~q~A~~t~D~----------evk~vl~~iadEEkeH~g~~l~~Lrr~dp~~ 78 (95)
T 1zpy_A 29 EELEAVDLYNQRVNACKDK----------ELKAILAHNRDEEKEHAAMLLEWIRRCDPAF 78 (95)
T ss_dssp HHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHhCCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 4578999999999876443 47899999987 5555555555444556655
No 128
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=24.11 E-value=1.6e+02 Score=19.53 Aligned_cols=71 Identities=6% Similarity=-0.010 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCcc-c-hHHHHHHHHHHH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQD-T-REYKFLLKLIES 102 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~-S-RE~klL~~LieA 102 (146)
.+|.+.|++.-..+-+.+.-...+.-+.-. |.++... |...|...+++-.+.....++ . .....+..+-.+
T Consensus 43 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l-~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~ 116 (203)
T 3gw4_A 43 DEARASFQALQQQAQKSGDHTAEHRALHQV-GMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATV 116 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHH-HHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 578888988877666665544555544444 4444444 888888888877777555542 2 344444444433
No 129
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=23.80 E-value=1.9e+02 Score=20.31 Aligned_cols=80 Identities=11% Similarity=0.005 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhcchhHHHHHHhHHHhcCCCCcc-chHHHHHHHHHHHH-hhcCH
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQD-TREYKFLLKLIESL-EEEDS 108 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~D~v~a~~ale~Y~~~DPsF~~-SRE~klL~~LieAv-e~~D~ 108 (146)
.+|.+.|++.-...-+++--...+.-+...|-++.-..|...|...+++..+..|...+ ......+..+..+. ..||.
T Consensus 240 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 319 (338)
T 3ro2_A 240 ETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNH 319 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh
Confidence 68888888888777666666777888888888888888888888888887777776654 33344444444443 34554
Q ss_pred HH
Q psy16704 109 DA 110 (146)
Q Consensus 109 e~ 110 (146)
+.
T Consensus 320 ~~ 321 (338)
T 3ro2_A 320 DQ 321 (338)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 130
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=23.61 E-value=2.4e+02 Score=21.32 Aligned_cols=54 Identities=11% Similarity=0.134 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704 30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT 90 (146)
Q Consensus 30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S 90 (146)
-.+|.+.|+++....=+++ +.+..-|.|+... +...|...+++-.+.+|...++
T Consensus 182 ~~eA~~~~~~~l~~~p~~~-------~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~ 236 (291)
T 3mkr_A 182 LQDAYYIFQEMADKCSPTL-------LLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPET 236 (291)
T ss_dssp HHHHHHHHHHHHHHSCCCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 3578888888887643332 3455567777777 9999999999999999988765
No 131
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=23.59 E-value=68 Score=22.77 Aligned_cols=50 Identities=20% Similarity=0.088 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 29 FRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 29 ~~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
=-.+|+..|+|.|..+=+ --+|+.|.|.+. ...-+...++=-...||.|.
T Consensus 29 ~EleAI~~Y~q~a~~~~d----------~~~k~vl~~i~~EEkeH~g~~lelLrr~Dp~~~ 79 (95)
T 3k6c_A 29 EELEAVDLYNQRVNACKD----------KELKAILAHNRDEEKEHAAMLLEWIRRCDPAFD 79 (95)
T ss_dssp HHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhCCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 367999999999987533 347889999887 55666666666666666653
No 132
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=23.50 E-value=2.3e+02 Score=22.60 Aligned_cols=51 Identities=8% Similarity=0.016 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ 88 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~ 88 (146)
.+|.+.|+++-+..- -+++-| ++-|.|+... +...|...+++..+++|.-.
T Consensus 290 ~~A~~~~~~al~~~p------~~~~a~-~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~ 341 (370)
T 1ihg_A 290 QGAVDSCLEALEIDP------SNTKAL-YRRAQGWQGLKEYDQALADLKKAQEIAPEDK 341 (370)
T ss_dssp HHHHHHHHHHHTTCT------TCHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCc------hhHHHH-HHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 577888877765321 234444 4556667776 99999999999999999854
No 133
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=23.06 E-value=57 Score=27.82 Aligned_cols=46 Identities=4% Similarity=-0.103 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhhcccchhhchhHHhHHhHHHHHhc-chhHH
Q psy16704 23 FMLMMTFRIVYSLLFYSTG-KAATENSLMKYNSKEYFFKAGLCHLCI-DLLNC 73 (146)
Q Consensus 23 ~~~~~~~~~~A~eiyE~VA-~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a 73 (146)
+.+..||+. -+++|--. -..|+++|..++-. ..|.||++|. +....
T Consensus 233 La~i~t~a~--~e~~ef~~Lc~~LG~RL~~~g~~---~~A~lCYi~Ag~~dk~ 280 (399)
T 2pm7_A 233 SKAIQNLYP--NDIAQRNEMMIKLGDRMKENGHR---QDSLTLYLAAGSLDKV 280 (399)
T ss_dssp HHHHHHHCT--TCHHHHHHHHHHHHHHHHTTTCH---HHHHHHHHHHTCHHHH
T ss_pred HHHHHhcCC--ccHhHHHHHHHHHHHHHHhCCCh---hhhhHHHHhhCCHHHH
Confidence 456678874 22222222 24667777776533 8999999997 54433
No 134
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=22.91 E-value=2.5e+02 Score=23.80 Aligned_cols=81 Identities=17% Similarity=0.168 Sum_probs=51.2
Q ss_pred HHHHHHHhhcccchhhchhHHhHHhHHHHHhcchhHH-HHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHH
Q psy16704 37 FYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNC-QQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETV 115 (146)
Q Consensus 37 yE~VA~~sl~n~LlKysaKeyffkA~LC~L~~D~v~a-~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV 115 (146)
||.-...|++++. +-=|.+...+.+..-- ++..++|-..-.. +.+ +..++.++-.+|.+.....
T Consensus 159 ~e~AV~~cl~~~r--------~adAllLA~~gg~el~~~~vq~~Y~~k~~~---~~~---~~rll~~iv~~n~~d~V~~- 223 (399)
T 2pm7_A 159 IKSAVKNSLENDL--------MMEAMVIALDSNNERLKESVKNAYFAKYGS---KSS---LSRILYSISKREVDDLVEN- 223 (399)
T ss_dssp HHHHHHHHHTTTC--------HHHHHHHHTTCCCHHHHHHHHHHHHHHHTT---SCH---HHHHHHHHHTTCCHHHHHH-
T ss_pred HHHHHHHHHHCCC--------hHHHHHHHHhcCHHHHHHHHHHHHHHhccc---Cch---HHHHHHHHHccCHHHHHhc-
Confidence 4444555555553 2345555555577666 7777778644332 111 3457889999999876664
Q ss_pred HhhhccCCchHHHHHHHHHHHhh
Q psy16704 116 KEFDSISRLDQWYTTMLLKIKRQ 138 (146)
Q Consensus 116 ~eYD~isrLD~WKT~mLLkIKk~ 138 (146)
..|++||.++-+-.-..
T Consensus 224 ------~~l~~WkE~La~i~t~a 240 (399)
T 2pm7_A 224 ------LDVSQWKFISKAIQNLY 240 (399)
T ss_dssp ------BCGGGHHHHHHHHHHHC
T ss_pred ------CChhhHHHHHHHHHhcC
Confidence 46999999987766544
No 135
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=22.83 E-value=1.2e+02 Score=22.84 Aligned_cols=48 Identities=8% Similarity=-0.042 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCC
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSP 85 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DP 85 (146)
.+|.+.|++.-...=+|+ +..+.-+.+++.. +...|...+++-...+|
T Consensus 134 ~~A~~~~~~al~~~P~~~-------~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p 182 (287)
T 3qou_A 134 TDALPLLXDAWQLSNQNG-------EIGLLLAETLIALNRSEDAEAVLXTIPLQDQ 182 (287)
T ss_dssp HHHHHHHHHHHHHTTSCH-------HHHHHHHHHHHHTTCHHHHHHHHTTSCGGGC
T ss_pred HHHHHHHHHHHHhCCcch-------hHHHHHHHHHHHCCCHHHHHHHHHhCchhhc
Confidence 567777777766554443 2333344455555 77777777777777777
No 136
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=22.67 E-value=2.7e+02 Score=21.49 Aligned_cols=87 Identities=11% Similarity=0.126 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHh---c-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHH-Hhh
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLC---I-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIES-LEE 105 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~---~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieA-ve~ 105 (146)
.+|.+.|++.....-+++-....+. .+..-|.|+.. . +...|...+++..+.+|...... ..+..+ ...
T Consensus 389 ~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-----~~la~~~~~~ 462 (514)
T 2gw1_A 389 DKALKQYDLAIELENKLDGIYVGIA-PLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAK-----IGLAQMKLQQ 462 (514)
T ss_dssp HHHHHHHHHHHHHHHTSSSCSSCSH-HHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHH-----HHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhccchHHHHHH-HHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHH-----HHHHHHHHHh
Confidence 5788889888776666553333333 44455566666 6 99999999999999999865332 222222 234
Q ss_pred cCHHHHHHHHHhhhccCCchH
Q psy16704 106 EDSDAFSETVKEFDSISRLDQ 126 (146)
Q Consensus 106 ~D~e~Ft~aV~eYD~isrLD~ 126 (146)
|+. .+++..|.+.-++++
T Consensus 463 g~~---~~A~~~~~~a~~~~~ 480 (514)
T 2gw1_A 463 EDI---DEAITLFEESADLAR 480 (514)
T ss_dssp TCH---HHHHHHHHHHHHHCS
T ss_pred cCH---HHHHHHHHHHHHhcc
Confidence 443 445555554444443
No 137
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=22.57 E-value=1.1e+02 Score=23.87 Aligned_cols=54 Identities=11% Similarity=0.068 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccch
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTR 91 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SR 91 (146)
..|++.|+++-+..=+ +++ .+++-|.|+... +...|...+++..+++|.....+
T Consensus 247 ~~A~~~~~~al~~~p~------~~~-a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~ 301 (338)
T 2if4_A 247 DEAIGHCNIVLTEEEK------NPK-ALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIR 301 (338)
T ss_dssp HHHHHHHHHHHHHCTT------CHH-HHHHHHHHHHTTTCHHHHHHHHHHTTC---------
T ss_pred HHHHHHHHHHHHhCCC------CHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 4788888887654322 334 345566677777 99999999999999999865443
No 138
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=22.57 E-value=2.3e+02 Score=20.78 Aligned_cols=53 Identities=8% Similarity=0.071 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCC
Q psy16704 30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAF 87 (146)
Q Consensus 30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF 87 (146)
-.+|.+.|++..+..-+++ .+ ..+..-|.++... +...|...+++-.+.+|..
T Consensus 197 ~~~A~~~~~~a~~~~p~~~----~~-~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 250 (368)
T 1fch_A 197 FLEVKELFLAAVRLDPTSI----DP-DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND 250 (368)
T ss_dssp HHHHHHHHHHHHHHSTTSC----CH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCcCcc----cH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 3566777776655433221 12 2333444444444 7777777777777777764
No 139
>1ecm_A Endo-oxabicyclic transition state analogue; P-protein, chorismate mutase domain, chorismate mutase; HET: TSA; 2.20A {Escherichia coli} SCOP: a.130.1.1
Probab=22.15 E-value=82 Score=21.58 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=23.7
Q ss_pred CCCCccchHHHHHHHHHHHHhhcCH-HHHHHHH
Q psy16704 84 SPAFQDTREYKFLLKLIESLEEEDS-DAFSETV 115 (146)
Q Consensus 84 DPsF~~SRE~klL~~LieAve~~D~-e~Ft~aV 115 (146)
-|-+...||...+..+.+..++++. +.+...+
T Consensus 44 ~~i~dp~RE~~vl~~~~~~a~~~~l~~~~i~~i 76 (109)
T 1ecm_A 44 RPVRDIDRERDLLERLITLGKAHHLDAHYITRL 76 (109)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhHhCCCCHHHHHHH
Confidence 4889999999999999997665443 4444444
No 140
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=22.03 E-value=2.2e+02 Score=25.56 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCcc
Q psy16704 31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQD 89 (146)
Q Consensus 31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~ 89 (146)
.+|.+.|++..+-.=++ -+.+.+-|.++... +..+|...+++-.+++|.+..
T Consensus 60 ~eA~~~~~~Al~l~P~~-------~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~ 112 (723)
T 4gyw_A 60 QEALMHYKEAIRISPTF-------ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD 112 (723)
T ss_dssp HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 46777777765432221 23455556666666 888888888888888887753
No 141
>1vls_A TAR, aspartate receptor; chemotaxis, bacterial chemotaxis receptor, unbound; 1.85A {Salmonella typhimurium} SCOP: a.24.2.1 PDB: 1vlt_A 1was_A 1wat_A 1jmw_A
Probab=21.75 E-value=1.9e+02 Score=19.33 Aligned_cols=44 Identities=20% Similarity=0.346 Sum_probs=30.4
Q ss_pred chhHHHHHHhHHHhcCCCCccchH------------HHHHHHHHHHHhhcCHHHHHH
Q psy16704 69 DLLNCQQALSRYIDLSPAFQDTRE------------YKFLLKLIESLEEEDSDAFSE 113 (146)
Q Consensus 69 D~v~a~~ale~Y~~~DPsF~~SRE------------~klL~~LieAve~~D~e~Ft~ 113 (146)
-...++..++.|...-++ +..++ ..-|..+++++++||.+.|.+
T Consensus 62 ~l~~a~~~~~~y~~~~~~-~~~~~l~~~l~~~~~~~~~~l~~~~~al~~~~~~~~~~ 117 (146)
T 1vls_A 62 TLAQAAAHYANFKNMTPL-PAMAEASANVDEKYQRYQAALAELIQFLDNGNMDAYFA 117 (146)
T ss_dssp HHHHHHHHHHHHHHSCCC-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHh
Confidence 566788889999988752 11111 124777888999999998864
No 142
>2vgq_A Maltose-binding periplasmic protein, mitochondrial antiviral-signaling protein; immune system/transport, IPS1/MAVS/VISA/cardif; HET: MTT; 2.1A {Escherichia coli}
Probab=21.59 E-value=63 Score=26.77 Aligned_cols=61 Identities=11% Similarity=0.164 Sum_probs=42.6
Q ss_pred HHHhcCCCCccchH---HHHH-----------HHHHHHHhhcCHHHHHHHHHhhhccCCchHHHHHHHHHHHhhcCC
Q psy16704 79 RYIDLSPAFQDTRE---YKFL-----------LKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQIST 141 (146)
Q Consensus 79 ~Y~~~DPsF~~SRE---~klL-----------~~LieAve~~D~e~Ft~aV~eYD~isrLD~WKT~mLLkIKk~I~~ 141 (146)
.|.-..|.|.++.| ..+| +.+-+++++| ....+++..|+++.+-++|-.+++..+.+....
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~d~~~i~~~~~~~--~~~~~a~~~~~~~~~~~~w~~~~~~~l~~~~~~ 466 (477)
T 2vgq_A 392 TYKYICRNFSNFCNVDVVEILPYLPCLTARDQDRLRATCTLS--GNRDTLWHLFNTLQRRPGWVEYFIAALRGCELV 466 (477)
T ss_dssp HHHHHHHTGGGGTTCCHHHHGGGCTTSCHHHHHHHHHHHHHH--CHHHHHHHHHHHHTTSTTHHHHHHHHHHHTTCH
T ss_pred HHHHHHhcccccccccHHHhhccCccCcHHHHHHHHHHHhcc--ccHHHHHHHHHHHhhCCChHHHHHHHHHHcCcH
Confidence 44556788987766 1122 2233344443 456688999999999999999999999887643
No 143
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=21.39 E-value=2e+02 Score=21.26 Aligned_cols=71 Identities=7% Similarity=0.020 Sum_probs=40.4
Q ss_pred ccchhhchhHHhHHhHHHHHhc-chh-HH----HHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHHhh
Q psy16704 47 NSLMKYNSKEYFFKAGLCHLCI-DLL-NC----QQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEF 118 (146)
Q Consensus 47 n~LlKysaKeyffkA~LC~L~~-D~v-~a----~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~eY 118 (146)
++.-.|..-|.-|-..|+..|. ... .. ...+..+....|... .+-..--..|++|++++|.+.-..++.+.
T Consensus 132 ~d~~~~~~~d~~FH~~i~~~s~N~~l~~~~~~l~~~~~~~~~~~~~~~-~~~~~eH~~I~~Ai~~~d~~~A~~~~~~H 208 (222)
T 3ihu_A 132 QDGETFSNARRHFYRTLLEMGDNRELRRLFPTIHMPIVHAQHRLASLR-QMRLDDYRRIATAVLAGEPDAAEAAGAAH 208 (222)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHTTGGGGH-HHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhccchhh-hhhHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4455666677778888888774 221 11 111222222222221 11122347899999999999988887754
No 144
>2d8d_A Aroag, phospho-2-dehydro-3-deoxyheptonate aldolase/chori mutase; chorismate, dimer, structural genomics, NPPSFA; 1.15A {Thermus thermophilus} SCOP: a.130.1.1 PDB: 2d8e_A
Probab=20.83 E-value=63 Score=21.41 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=24.4
Q ss_pred CCCCccchHHHHHHHHHHHHhhcCHHHHHHHHH
Q psy16704 84 SPAFQDTREYKFLLKLIESLEEEDSDAFSETVK 116 (146)
Q Consensus 84 DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~ 116 (146)
-|-|...||...+..+.+..+.|=...+...++
T Consensus 42 ~~i~dp~RE~~vl~~~~~~~~~~l~~~~i~~if 74 (90)
T 2d8d_A 42 LPHYDPKREEEMLAYLTAENPGPFPDETIRKLF 74 (90)
T ss_dssp CCSCCHHHHHHHHHHHHHHCCSSSCHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHccCCCCHHHHHHHH
Confidence 489999999999999998864444455555543
No 145
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=20.79 E-value=2.9e+02 Score=21.17 Aligned_cols=23 Identities=9% Similarity=-0.061 Sum_probs=11.7
Q ss_pred hHHhHHHHHhcchhHHHHHHhHH
Q psy16704 58 FFKAGLCHLCIDLLNCQQALSRY 80 (146)
Q Consensus 58 ffkA~LC~L~~D~v~a~~ale~Y 80 (146)
.|+|.+.++-.+....+..++++
T Consensus 18 ~FR~~l~~~E~~~~~l~~~l~kl 40 (265)
T 2q12_A 18 QTRSLLGVFEEDATAISNYMNQL 40 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555555554455444444
No 146
>1col_A Colicin A; antibacterial protein; 2.40A {Escherichia coli} SCOP: f.1.1.1
Probab=20.17 E-value=2e+02 Score=22.96 Aligned_cols=67 Identities=7% Similarity=0.131 Sum_probs=49.8
Q ss_pred chhHHHHHHhHHHh-cCCCCc-cchHHHHHHHHHHHHhhcCHHHHHHHHHhhhccCCchHHHHH---HHHHHHhhcC
Q psy16704 69 DLLNCQQALSRYID-LSPAFQ-DTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTT---MLLKIKRQIS 140 (146)
Q Consensus 69 D~v~a~~ale~Y~~-~DPsF~-~SRE~klL~~LieAve~~D~e~Ft~aV~eYD~isrLD~WKT~---mLLkIKk~I~ 140 (146)
-+.+|-+++|+|.+ .+-.|. .-|+ .|..|+|.-|.+..++.+..|.+--++-.|-.. +..++++.++
T Consensus 55 s~~dAl~s~eK~k~nlnkK~n~kDr~-----AI~~Al~s~d~~~~A~nl~~~sK~f~~~~~~i~~~~v~~~~~~g~e 126 (204)
T 1col_A 55 SFDDAMASLNKITANPAMKINKADRD-----ALVNAWKHVDAQDMANKLGNLSKAFKVADVVMKVEKVREKSIEGYE 126 (204)
T ss_dssp CHHHHHHHHHHHHTSGGGCCCHHHHH-----HHHHHHHTCCHHHHHHHHHHHCGGGCCTTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhChhhhcchhhHH-----HHHHHHHHcCHHHHHHHHHHHHhhhchhHHHhhHHHHHHHHHHHhh
Confidence 46788899999975 444452 3343 588999999999999999999888777777666 6666666654
No 147
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=20.07 E-value=3.4e+02 Score=24.23 Aligned_cols=29 Identities=17% Similarity=0.357 Sum_probs=23.5
Q ss_pred HHHHHHHhhcCHHHHHHHHHhhhccCCch
Q psy16704 97 LKLIESLEEEDSDAFSETVKEFDSISRLD 125 (146)
Q Consensus 97 ~~LieAve~~D~e~Ft~aV~eYD~isrLD 125 (146)
..|++|++.||.+.|.+.+..+...=.=|
T Consensus 346 ~~Lv~Avr~GdL~~F~~~L~~h~~~F~~D 374 (523)
T 4b4t_S 346 YHLTKAVKLGDLKKFTSTITKYKQLLLKD 374 (523)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHhcceeccC
Confidence 35899999999999999999887643333
Done!