Query psy16706
Match_columns 142
No_of_seqs 110 out of 802
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 19:56:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16706hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h51_A Aspartate aminotransfer 100.0 7.7E-37 2.6E-41 260.7 14.3 133 1-141 263-395 (420)
2 3k7y_A Aspartate aminotransfer 99.9 2.7E-25 9.2E-30 187.5 11.7 133 1-141 247-383 (405)
3 3meb_A Aspartate aminotransfer 99.9 1E-22 3.6E-27 171.2 12.8 134 1-141 275-422 (448)
4 4f4e_A Aromatic-amino-acid ami 99.8 2.3E-20 7.7E-25 154.5 14.0 134 1-141 267-400 (420)
5 7aat_A Aspartate aminotransfer 99.8 1.4E-19 4.9E-24 147.7 13.7 134 1-141 248-381 (401)
6 4eu1_A Mitochondrial aspartate 99.8 3.5E-19 1.2E-23 146.3 13.7 134 1-141 256-389 (409)
7 3fsl_A Aromatic-amino-acid ami 99.7 2.8E-17 9.6E-22 133.4 15.0 134 1-141 245-378 (397)
8 1yaa_A Aspartate aminotransfer 99.6 3E-15 1E-19 122.7 12.9 133 2-141 253-389 (412)
9 2ay1_A Aroat, aromatic amino a 99.6 4.2E-15 1.4E-19 120.7 13.1 133 2-141 242-374 (394)
10 3rq1_A Aminotransferase class 99.6 1.2E-14 4.1E-19 119.3 14.6 128 2-140 261-392 (418)
11 1ajs_A Aspartate aminotransfer 99.6 1.2E-14 3.9E-19 119.0 14.2 133 2-141 257-389 (412)
12 2q7w_A Aspartate aminotransfer 99.6 1E-14 3.6E-19 118.2 12.8 133 2-141 245-377 (396)
13 3t18_A Aminotransferase class 99.5 1.3E-13 4.3E-18 113.1 12.8 128 2-141 260-391 (413)
14 3tcm_A Alanine aminotransferas 99.4 3.7E-12 1.3E-16 108.9 12.9 120 2-136 316-457 (500)
15 3dyd_A Tyrosine aminotransfera 99.3 5.4E-12 1.9E-16 104.7 8.5 121 2-137 262-391 (427)
16 2x5f_A Aspartate_tyrosine_phen 99.2 3.5E-11 1.2E-15 99.1 10.7 125 2-136 270-398 (430)
17 3ihj_A Alanine aminotransferas 99.2 2.1E-10 7E-15 98.3 13.0 120 2-136 315-456 (498)
18 3qgu_A LL-diaminopimelate amin 99.0 1.2E-09 4.2E-14 90.3 8.1 118 1-136 280-404 (449)
19 3ei9_A LL-diaminopimelate amin 98.8 5.4E-09 1.8E-13 86.1 7.0 117 2-135 269-391 (432)
20 3nra_A Aspartate aminotransfer 98.8 1.4E-08 4.7E-13 82.1 8.9 113 2-136 252-369 (407)
21 3piu_A 1-aminocyclopropane-1-c 98.8 6.1E-08 2.1E-12 79.9 11.7 113 2-135 272-394 (435)
22 1iay_A ACC synthase 2, 1-amino 98.7 1.3E-07 4.4E-12 77.7 11.9 114 2-136 267-390 (428)
23 3f6t_A Aspartate aminotransfer 98.7 3.4E-09 1.2E-13 91.5 2.5 122 1-136 311-489 (533)
24 1b5p_A Protein (aspartate amin 98.7 1.4E-07 4.8E-12 76.6 11.8 114 2-136 233-351 (385)
25 3bwn_A AT1G70560, L-tryptophan 98.7 2.8E-08 9.5E-13 81.8 6.5 115 2-135 216-351 (391)
26 3e2y_A Kynurenine-oxoglutarate 98.7 2.5E-08 8.5E-13 80.9 5.7 119 2-138 239-374 (410)
27 3fvs_A Kynurenine--oxoglutarat 98.6 4.8E-08 1.7E-12 79.6 5.5 119 2-137 246-382 (422)
28 3g7q_A Valine-pyruvate aminotr 98.5 1.2E-06 4.2E-11 71.0 12.8 116 2-136 249-370 (417)
29 3get_A Histidinol-phosphate am 98.5 8.4E-07 2.9E-11 70.9 11.5 108 2-137 226-336 (365)
30 3h14_A Aminotransferase, class 98.5 5.5E-07 1.9E-11 72.7 9.7 112 1-136 228-345 (391)
31 3jtx_A Aminotransferase; NP_28 98.5 6.4E-07 2.2E-11 72.2 10.0 110 2-136 244-356 (396)
32 1o4s_A Aspartate aminotransfer 98.5 6E-07 2E-11 72.9 9.9 109 2-136 245-355 (389)
33 2x5d_A Probable aminotransfera 98.5 1.5E-06 5E-11 71.0 11.6 112 2-136 244-362 (412)
34 3kax_A Aminotransferase, class 98.5 1.8E-06 6E-11 69.0 11.8 115 2-136 229-349 (383)
35 3d6k_A Putative aminotransfera 98.5 1.1E-06 3.6E-11 72.5 10.5 118 2-137 257-378 (422)
36 3p1t_A Putative histidinol-pho 98.4 1.4E-06 4.7E-11 68.6 10.4 109 2-137 197-305 (337)
37 3ele_A Amino transferase; RER0 98.4 4.8E-07 1.7E-11 73.1 7.7 113 2-137 247-363 (398)
38 1gd9_A Aspartate aminotransfer 98.4 2.9E-06 9.9E-11 68.3 11.9 114 2-136 232-350 (389)
39 1xi9_A Putative transaminase; 98.4 2.1E-06 7.3E-11 69.9 11.0 115 2-136 244-367 (406)
40 1fg7_A Histidinol phosphate am 98.4 1.6E-06 5.5E-11 69.9 10.1 110 2-135 213-323 (356)
41 3ppl_A Aspartate aminotransfer 98.4 6.4E-06 2.2E-10 67.6 13.9 118 2-137 259-380 (427)
42 2o1b_A Aminotransferase, class 98.4 2.8E-06 9.6E-11 69.5 11.5 112 2-136 252-367 (404)
43 1j32_A Aspartate aminotransfer 98.4 2.7E-06 9.4E-11 68.4 11.1 113 2-136 236-353 (388)
44 4dq6_A Putative pyridoxal phos 98.4 2.3E-06 7.8E-11 68.5 10.2 116 2-136 237-357 (391)
45 3g0t_A Putative aminotransfera 98.4 5.7E-07 2E-11 73.5 6.8 119 2-137 259-401 (437)
46 3ly1_A Putative histidinol-pho 98.4 1.8E-06 6.1E-11 68.5 9.4 105 2-134 212-318 (354)
47 3dzz_A Putative pyridoxal 5'-p 98.3 3.7E-06 1.3E-10 67.3 10.8 117 2-137 233-354 (391)
48 1c7n_A Cystalysin; transferase 98.3 3E-06 1E-10 68.4 10.1 115 2-136 237-357 (399)
49 2z61_A Probable aspartate amin 98.3 3.1E-06 1.1E-10 67.8 10.0 113 2-136 221-335 (370)
50 3ez1_A Aminotransferase MOCR f 98.3 4.5E-06 1.5E-10 68.2 11.0 119 2-137 252-375 (423)
51 2hox_A ALLIIN lyase 1; cystein 98.3 8.1E-07 2.8E-11 74.3 6.3 123 2-136 250-390 (427)
52 3ffh_A Histidinol-phosphate am 98.3 4E-06 1.4E-10 66.8 9.9 109 1-137 223-334 (363)
53 3hdo_A Histidinol-phosphate am 98.3 5.3E-06 1.8E-10 66.4 10.5 108 2-137 213-323 (360)
54 2gb3_A Aspartate aminotransfer 98.3 1.1E-05 3.7E-10 65.9 12.4 111 2-135 243-362 (409)
55 1uu1_A Histidinol-phosphate am 98.3 6.3E-06 2.2E-10 65.4 10.6 106 2-135 201-309 (335)
56 3ezs_A Aminotransferase ASPB; 98.3 3.4E-06 1.2E-10 67.4 9.1 106 2-135 230-336 (376)
57 3b46_A Aminotransferase BNA3; 98.3 3.3E-06 1.1E-10 70.3 9.1 115 2-137 273-407 (447)
58 3fdb_A Beta C-S lyase, putativ 98.3 1.7E-06 5.8E-11 69.1 7.0 115 2-137 222-341 (377)
59 2o0r_A RV0858C (N-succinyldiam 98.3 4.6E-06 1.6E-10 68.0 9.6 111 2-136 232-349 (411)
60 1u08_A Hypothetical aminotrans 98.3 2.7E-06 9.3E-11 68.5 8.1 111 2-136 235-352 (386)
61 2dou_A Probable N-succinyldiam 98.2 1E-05 3.6E-10 64.9 11.0 110 2-136 229-342 (376)
62 1bw0_A TAT, protein (tyrosine 98.2 3.5E-06 1.2E-10 68.6 8.1 118 2-136 252-379 (416)
63 3asa_A LL-diaminopimelate amin 98.2 1.3E-06 4.4E-11 71.2 5.6 112 2-136 235-357 (400)
64 1d2f_A MALY protein; aminotran 98.1 1.3E-05 4.4E-10 64.7 9.8 115 2-136 232-353 (390)
65 3l8a_A METC, putative aminotra 98.1 1.1E-05 3.7E-10 66.3 9.5 114 2-135 267-385 (421)
66 1yiz_A Kynurenine aminotransfe 98.1 4.8E-06 1.6E-10 68.1 7.3 116 2-136 254-388 (429)
67 3cq5_A Histidinol-phosphate am 98.1 1.1E-05 3.6E-10 64.9 9.0 107 2-136 230-338 (369)
68 3if2_A Aminotransferase; YP_26 98.1 1.7E-05 5.8E-10 65.1 10.1 116 2-136 275-396 (444)
69 3op7_A Aminotransferase class 98.1 1.7E-05 5.7E-10 63.5 9.2 115 1-137 220-338 (375)
70 3euc_A Histidinol-phosphate am 98.1 3.6E-05 1.2E-09 61.4 10.8 108 2-137 226-334 (367)
71 1v2d_A Glutamine aminotransfer 98.0 6.2E-06 2.1E-10 66.3 5.4 112 2-135 221-332 (381)
72 3aow_A Putative uncharacterize 98.0 5.6E-05 1.9E-09 63.2 11.3 110 14-136 293-406 (448)
73 3fkd_A L-threonine-O-3-phospha 98.0 9.7E-06 3.3E-10 64.4 5.8 109 2-136 196-307 (350)
74 3ftb_A Histidinol-phosphate am 97.9 3.7E-05 1.3E-09 60.9 8.9 110 2-136 214-326 (361)
75 2zc0_A Alanine glyoxylate tran 97.9 6.2E-05 2.1E-09 60.8 10.3 109 15-136 252-365 (407)
76 2zyj_A Alpha-aminodipate amino 97.9 0.00017 5.7E-09 58.3 11.9 108 14-135 242-353 (397)
77 3b1d_A Betac-S lyase; HET: PLP 96.9 3.8E-06 1.3E-10 68.1 0.0 115 2-136 237-357 (392)
78 1vp4_A Aminotransferase, putat 97.7 5.9E-05 2E-09 61.9 7.0 109 14-135 264-378 (425)
79 2r2n_A Kynurenine/alpha-aminoa 97.6 0.00047 1.6E-08 56.6 10.2 112 14-135 267-383 (425)
80 1lc5_A COBD, L-threonine-O-3-p 97.6 0.00029 9.8E-09 56.2 8.3 109 2-136 215-325 (364)
81 2dr1_A PH1308 protein, 386AA l 97.3 0.0024 8.1E-08 50.6 11.0 82 44-136 253-343 (386)
82 2huf_A Alanine glyoxylate amin 97.3 0.0016 5.6E-08 51.9 9.5 81 46-136 258-346 (393)
83 1iug_A Putative aspartate amin 97.1 0.0071 2.4E-07 47.2 11.4 80 46-136 228-312 (352)
84 3a2b_A Serine palmitoyltransfe 97.0 0.0044 1.5E-07 49.7 9.8 106 2-136 242-353 (398)
85 3zrp_A Serine-pyruvate aminotr 97.0 0.015 5.2E-07 45.7 12.7 79 48-137 243-329 (384)
86 2bwn_A 5-aminolevulinate synth 97.0 0.003 1E-07 50.8 8.5 111 2-135 247-360 (401)
87 1vjo_A Alanine--glyoxylate ami 97.0 0.0041 1.4E-07 49.7 9.0 79 48-136 272-358 (393)
88 2zy4_A L-aspartate beta-decarb 96.9 0.0019 6.4E-08 56.0 7.1 57 74-136 409-486 (546)
89 1elu_A L-cysteine/L-cystine C- 96.8 0.001 3.4E-08 52.8 4.2 60 74-137 295-360 (390)
90 2fyf_A PSAT, phosphoserine ami 96.8 0.023 8E-07 45.8 12.4 81 45-135 271-361 (398)
91 2dkj_A Serine hydroxymethyltra 96.6 0.021 7.3E-07 45.5 10.7 107 14-135 229-341 (407)
92 3kgw_A Alanine-glyoxylate amin 96.5 0.015 5E-07 45.9 9.2 59 74-136 285-351 (393)
93 2yrr_A Aminotransferase, class 96.4 0.044 1.5E-06 42.4 11.2 77 48-135 232-315 (353)
94 1fc4_A 2-amino-3-ketobutyrate 96.4 0.021 7.2E-07 45.7 9.6 108 2-136 246-358 (401)
95 3tqx_A 2-amino-3-ketobutyrate 96.4 0.023 8E-07 45.1 9.7 58 72-135 295-356 (399)
96 3n0l_A Serine hydroxymethyltra 96.4 0.055 1.9E-06 43.2 11.7 107 14-136 230-343 (417)
97 1bs0_A Protein (8-amino-7-oxon 96.3 0.022 7.6E-07 45.3 8.8 107 2-135 235-347 (384)
98 2z9v_A Aspartate aminotransfer 96.2 0.029 1E-06 44.5 9.5 64 69-136 262-334 (392)
99 3gbx_A Serine hydroxymethyltra 96.2 0.069 2.4E-06 42.6 11.6 80 46-135 264-349 (420)
100 3nnk_A Ureidoglycine-glyoxylat 96.1 0.044 1.5E-06 43.7 9.9 63 69-135 282-352 (411)
101 1eg5_A Aminotransferase; PLP-d 96.0 0.0085 2.9E-07 47.2 5.3 80 46-136 236-321 (384)
102 1kmj_A Selenocysteine lyase; p 96.0 0.0085 2.9E-07 47.5 5.3 58 74-135 299-360 (406)
103 2vi8_A Serine hydroxymethyltra 96.0 0.044 1.5E-06 43.6 9.5 58 73-135 277-340 (405)
104 1t3i_A Probable cysteine desul 96.0 0.016 5.6E-07 46.2 6.9 59 74-136 303-369 (420)
105 3isl_A Purine catabolism prote 95.9 0.16 5.4E-06 40.4 12.3 79 47-135 266-352 (416)
106 3f0h_A Aminotransferase; RER07 95.8 0.08 2.7E-06 41.7 10.2 59 74-136 276-338 (376)
107 4eb5_A Probable cysteine desul 95.7 0.039 1.3E-06 43.4 7.8 81 46-136 232-318 (382)
108 1sff_A 4-aminobutyrate aminotr 95.6 0.007 2.4E-07 48.9 3.1 111 2-137 267-391 (426)
109 1svv_A Threonine aldolase; str 95.5 0.032 1.1E-06 43.4 6.6 56 74-134 266-321 (359)
110 1pff_A Methionine gamma-lyase; 95.4 0.0042 1.4E-07 48.6 1.3 117 2-134 144-270 (331)
111 1w23_A Phosphoserine aminotran 95.3 0.061 2.1E-06 42.1 7.7 86 43-136 233-326 (360)
112 2eh6_A Acoat, acetylornithine 95.3 0.01 3.5E-07 47.0 3.0 104 2-135 240-345 (375)
113 3cai_A Possible aminotransfera 95.1 0.051 1.7E-06 43.4 6.8 66 66-135 293-363 (406)
114 3ffr_A Phosphoserine aminotran 95.1 0.41 1.4E-05 37.0 11.8 79 46-135 241-327 (362)
115 3ruy_A Ornithine aminotransfer 94.8 0.023 8E-07 45.4 3.9 103 16-137 258-363 (392)
116 2e7u_A Glutamate-1-semialdehyd 94.8 0.018 6.1E-07 46.9 3.3 117 2-137 265-398 (424)
117 2c0r_A PSAT, phosphoserine ami 94.7 0.07 2.4E-06 42.1 6.4 81 45-135 236-326 (362)
118 1vef_A Acetylornithine/acetyl- 94.7 0.029 1E-06 44.9 4.2 112 2-137 253-366 (395)
119 2bkw_A Alanine-glyoxylate amin 94.6 0.62 2.1E-05 36.4 11.8 79 47-136 257-343 (385)
120 3ecd_A Serine hydroxymethyltra 94.5 0.63 2.2E-05 37.0 11.8 58 72-134 286-349 (425)
121 2w8t_A SPT, serine palmitoyltr 94.3 0.023 7.8E-07 46.6 2.9 58 74-136 314-376 (427)
122 4e77_A Glutamate-1-semialdehyd 94.3 0.041 1.4E-06 44.9 4.3 18 119-137 383-400 (429)
123 3k28_A Glutamate-1-semialdehyd 94.2 0.013 4.5E-07 47.9 1.2 113 2-137 267-398 (429)
124 2ch1_A 3-hydroxykynurenine tra 94.2 0.28 9.5E-06 38.8 8.9 81 46-135 257-345 (396)
125 4adb_A Succinylornithine trans 94.1 0.026 8.7E-07 45.2 2.7 111 2-137 251-369 (406)
126 3fq8_A Glutamate-1-semialdehyd 94.1 0.042 1.4E-06 44.7 4.1 18 119-137 381-398 (427)
127 2po3_A 4-dehydrase; external a 94.0 0.36 1.2E-05 39.1 9.4 60 72-135 257-328 (424)
128 3lvm_A Cysteine desulfurase; s 93.8 0.03 1E-06 45.0 2.7 59 71-135 279-343 (423)
129 4a6r_A Omega transaminase; tra 93.7 0.15 5.2E-06 42.1 6.8 118 2-137 287-419 (459)
130 1qz9_A Kynureninase; kynurenin 93.6 0.036 1.2E-06 44.4 2.8 84 46-135 280-368 (416)
131 3gju_A Putative aminotransfera 93.6 0.088 3E-06 43.6 5.1 116 2-137 289-424 (460)
132 2eo5_A 419AA long hypothetical 93.6 0.09 3.1E-06 42.8 5.1 102 2-137 280-387 (419)
133 2epj_A Glutamate-1-semialdehyd 93.3 0.023 8E-07 46.4 1.2 18 119-137 385-402 (434)
134 4hvk_A Probable cysteine desul 93.3 0.075 2.6E-06 41.4 4.0 61 72-136 252-318 (382)
135 1m32_A 2-aminoethylphosphonate 93.2 0.94 3.2E-05 34.9 10.2 78 48-136 242-330 (366)
136 2oga_A Transaminase; PLP-depen 93.1 0.63 2.2E-05 37.3 9.5 106 2-135 212-336 (399)
137 2cy8_A D-phgat, D-phenylglycin 93.0 0.15 5.3E-06 41.8 5.8 20 119-139 391-410 (453)
138 1zod_A DGD, 2,2-dialkylglycine 92.7 0.07 2.4E-06 43.3 3.2 111 2-136 271-396 (433)
139 1e5e_A MGL, methionine gamma-l 92.6 0.27 9.3E-06 40.1 6.6 49 2-63 208-259 (404)
140 3nyt_A Aminotransferase WBPE; 92.5 0.77 2.6E-05 36.3 9.0 60 74-136 245-308 (367)
141 1ax4_A Tryptophanase; tryptoph 92.2 0.39 1.3E-05 39.2 7.1 48 84-135 331-390 (467)
142 3kki_A CAI-1 autoinducer synth 92.1 0.25 8.5E-06 39.7 5.7 53 75-134 307-363 (409)
143 3pj0_A LMO0305 protein; struct 91.7 0.54 1.8E-05 36.7 7.1 53 80-136 262-321 (359)
144 1v72_A Aldolase; PLP-dependent 91.6 1.4 4.7E-05 34.0 9.4 54 77-135 265-318 (356)
145 3i4j_A Aminotransferase, class 91.5 0.15 5E-06 41.5 3.8 115 2-136 260-389 (430)
146 3h7f_A Serine hydroxymethyltra 91.2 1.4 4.7E-05 36.2 9.5 58 73-135 299-367 (447)
147 3lws_A Aromatic amino acid bet 91.1 0.48 1.6E-05 37.0 6.3 51 82-136 262-319 (357)
148 3l44_A Glutamate-1-semialdehyd 90.9 0.14 4.8E-06 41.6 3.1 18 119-137 384-401 (434)
149 3f9t_A TDC, L-tyrosine decarbo 90.7 1.1 3.7E-05 34.9 8.0 62 71-137 304-366 (397)
150 2oqx_A Tryptophanase; lyase, p 90.6 0.74 2.5E-05 37.5 7.2 51 82-137 331-393 (467)
151 3dxv_A Alpha-amino-epsilon-cap 90.5 0.061 2.1E-06 43.9 0.5 19 118-137 374-392 (439)
152 1s0a_A Adenosylmethionine-8-am 90.4 0.33 1.1E-05 39.3 4.8 57 77-136 332-393 (429)
153 1rv3_A Serine hydroxymethyltra 90.3 1.8 6E-05 36.3 9.4 57 73-134 322-384 (483)
154 3acz_A Methionine gamma-lyase; 88.4 0.5 1.7E-05 38.2 4.5 26 108-135 304-330 (389)
155 2pb2_A Acetylornithine/succiny 88.2 0.32 1.1E-05 39.7 3.3 111 2-137 269-387 (420)
156 3hmu_A Aminotransferase, class 88.0 0.31 1E-05 40.9 3.1 114 2-137 291-422 (472)
157 3nx3_A Acoat, acetylornithine 87.3 0.34 1.2E-05 38.6 2.9 113 2-137 247-364 (395)
158 2ez2_A Beta-tyrosinase, tyrosi 87.0 4.6 0.00016 32.7 9.5 55 77-135 314-380 (456)
159 2e7j_A SEP-tRNA:Cys-tRNA synth 87.0 0.09 3.1E-06 41.2 -0.7 55 76-135 267-326 (371)
160 3n5m_A Adenosylmethionine-8-am 86.5 0.17 5.8E-06 41.5 0.6 18 119-137 398-415 (452)
161 2oat_A Ornithine aminotransfer 86.2 0.95 3.2E-05 37.3 5.1 108 2-136 291-407 (439)
162 1mdo_A ARNB aminotransferase; 86.2 11 0.00036 29.5 11.2 60 71-135 256-328 (393)
163 1wyu_A Glycine dehydrogenase ( 85.5 3.9 0.00013 33.2 8.5 55 74-133 342-400 (438)
164 1b9h_A AHBA synthase, protein 84.3 6.8 0.00023 30.7 9.1 58 74-135 252-321 (388)
165 2yky_A Beta-transaminase; tran 84.6 0.2 6.8E-06 42.7 0.0 17 120-137 417-433 (465)
166 3cog_A Cystathionine gamma-lya 84.1 0.91 3.1E-05 37.1 4.0 50 2-63 212-262 (403)
167 2aeu_A Hypothetical protein MJ 84.1 5.6 0.00019 31.8 8.6 110 14-136 211-333 (374)
168 1jg8_A L-ALLO-threonine aldola 83.7 9.3 0.00032 29.3 9.5 48 84-136 261-314 (347)
169 3i5t_A Aminotransferase; pyrid 83.3 0.73 2.5E-05 38.6 3.1 114 2-137 290-424 (476)
170 2a7v_A Serine hydroxymethyltra 83.0 14 0.00048 31.5 11.1 64 67-135 326-395 (490)
171 3a8u_X Omega-amino acid--pyruv 82.9 1.2 4E-05 36.3 4.1 57 77-137 350-417 (449)
172 4ffc_A 4-aminobutyrate aminotr 82.9 0.83 2.9E-05 37.8 3.3 113 2-137 293-416 (453)
173 3tfu_A Adenosylmethionine-8-am 82.7 1.9 6.6E-05 35.8 5.5 57 78-137 362-423 (457)
174 2ord_A Acoat, acetylornithine 81.9 0.26 8.8E-06 39.3 -0.2 109 2-137 251-366 (397)
175 3oks_A 4-aminobutyrate transam 80.6 1.4 4.7E-05 36.3 3.8 113 2-137 295-418 (451)
176 1cs1_A CGS, protein (cystathio 79.6 21 0.0007 28.1 10.9 25 108-134 297-323 (386)
177 3twe_A Alpha4H; unknown functi 79.2 3.2 0.00011 21.8 3.6 21 69-89 5-25 (27)
178 3dr4_A Putative perosamine syn 79.0 9.3 0.00032 30.0 8.2 60 72-136 265-337 (391)
179 1z7d_A Ornithine aminotransfer 78.7 1.9 6.6E-05 35.2 4.1 103 15-135 286-396 (433)
180 2rfv_A Methionine gamma-lyase; 78.5 8.4 0.00029 30.7 7.8 51 2-63 209-260 (398)
181 3dod_A Adenosylmethionine-8-am 77.6 1.3 4.6E-05 36.2 2.8 18 119-137 396-413 (448)
182 2cb1_A O-acetyl homoserine sul 77.1 20 0.00068 28.8 9.7 18 2-25 201-218 (412)
183 3vax_A Putative uncharacterize 76.0 6.4 0.00022 30.8 6.3 78 46-135 260-343 (400)
184 3ke3_A Putative serine-pyruvat 76.0 13 0.00044 29.4 8.2 78 48-136 252-335 (379)
185 3jzl_A Putative cystathionine 75.6 24 0.00081 29.1 10.0 76 2-97 226-303 (409)
186 3nmy_A Xometc, cystathionine g 74.5 23 0.00079 28.7 9.5 74 2-95 212-285 (400)
187 1o69_A Aminotransferase; struc 74.4 22 0.00076 28.1 9.3 22 74-95 245-266 (394)
188 1gc0_A Methionine gamma-lyase; 73.6 13 0.00046 29.6 7.8 27 107-135 310-338 (398)
189 3uwc_A Nucleotide-sugar aminot 72.7 12 0.00041 29.0 7.1 60 74-136 247-312 (374)
190 1mai_A Phospholipase C delta-1 72.0 3.2 0.00011 29.1 3.3 35 13-47 91-125 (131)
191 2fnu_A Aminotransferase; prote 71.1 8.9 0.00031 29.6 6.0 57 74-134 246-313 (375)
192 4g3b_A Alpha4F3D; alpha helix, 69.3 8.1 0.00028 20.1 3.6 22 68-89 4-25 (26)
193 1n8p_A Cystathionine gamma-lya 68.9 28 0.00096 27.9 8.7 28 2-36 202-229 (393)
194 3bb8_A CDP-4-keto-6-deoxy-D-gl 68.8 30 0.001 27.8 8.9 55 77-135 309-375 (437)
195 3mad_A Sphingosine-1-phosphate 66.0 22 0.00076 29.4 7.7 57 73-133 374-432 (514)
196 3qhx_A Cystathionine gamma-syn 65.2 51 0.0017 26.3 9.9 71 2-94 211-282 (392)
197 3e77_A Phosphoserine aminotran 63.8 28 0.00097 28.5 7.9 82 44-136 245-341 (377)
198 3e9k_A Kynureninase; kynurenin 63.2 20 0.00069 29.0 6.9 82 47-134 332-426 (465)
199 3ju7_A Putative PLP-dependent 62.5 53 0.0018 26.1 9.2 64 71-135 247-317 (377)
200 2cjg_A L-lysine-epsilon aminot 59.1 11 0.00038 30.7 4.6 59 77-137 353-417 (449)
201 3mc6_A Sphingosine-1-phosphate 58.9 22 0.00075 29.1 6.4 60 73-135 342-404 (497)
202 3hht_A NitrIle hydratase alpha 57.3 4.6 0.00016 31.7 1.8 24 47-70 57-80 (216)
203 3frk_A QDTB; aminotransferase, 56.8 43 0.0015 25.9 7.5 57 74-135 246-308 (373)
204 3ndn_A O-succinylhomoserine su 56.0 57 0.0019 26.5 8.4 18 78-95 281-298 (414)
205 1ohv_A 4-aminobutyrate aminotr 54.0 20 0.00069 29.6 5.4 59 77-137 376-440 (472)
206 3qm2_A Phosphoserine aminotran 53.9 49 0.0017 27.0 7.7 83 45-135 261-350 (386)
207 3b8x_A WBDK, pyridoxamine 5-ph 52.1 55 0.0019 25.5 7.5 60 72-135 266-334 (390)
208 3hvy_A Cystathionine beta-lyas 50.9 1E+02 0.0036 25.4 10.7 75 2-96 243-319 (427)
209 3ht4_A Aluminum resistance pro 50.5 86 0.0029 25.7 8.7 25 73-97 285-309 (431)
210 4fm4_A NitrIle hydratase alpha 50.5 5.5 0.00019 31.1 1.2 23 47-69 41-63 (209)
211 3hyb_A RBCX protein; rubisco, 49.9 64 0.0022 23.9 6.9 19 74-92 83-101 (155)
212 3qyh_A CO-type nitrIle hydrata 49.5 5.5 0.00019 31.4 1.1 22 48-69 69-90 (226)
213 2x3l_A ORN/Lys/Arg decarboxyla 49.3 1.1E+02 0.0036 25.0 10.8 33 101-134 285-320 (446)
214 3a8g_A NitrIle hydratase subun 47.6 8.3 0.00028 30.0 1.8 22 48-69 52-73 (207)
215 1ugp_A NitrIle hydratase alpha 46.4 6.8 0.00023 30.4 1.2 23 48-70 49-71 (203)
216 2zzd_C Thiocyanate hydrolase s 46.2 14 0.00047 29.4 2.9 22 49-70 60-81 (243)
217 3i16_A Aluminum resistance pro 45.7 1.3E+02 0.0043 24.9 10.3 74 2-96 243-319 (427)
218 3qr0_A Phospholipase C-beta (P 45.5 42 0.0014 30.8 6.5 31 13-43 109-142 (816)
219 2c81_A Glutamine-2-deoxy-scyll 44.0 55 0.0019 25.8 6.4 56 74-132 265-334 (418)
220 2ctz_A O-acetyl-L-homoserine s 41.3 1.4E+02 0.0046 23.9 9.6 20 2-27 205-224 (421)
221 3csx_A Putative uncharacterize 39.0 38 0.0013 22.5 3.8 37 68-106 18-54 (81)
222 1wyu_B Glycine dehydrogenase s 38.4 1.1E+02 0.0038 24.9 7.5 56 72-133 340-401 (474)
223 4ao9_A Beta-phenylalanine amin 37.5 80 0.0028 26.5 6.6 14 127-140 409-422 (454)
224 2peq_A ORF134; helix bundle, p 36.9 1.1E+02 0.0038 22.0 6.4 17 75-91 65-81 (134)
225 2z67_A O-phosphoseryl-tRNA(SEC 31.3 81 0.0028 25.6 5.5 55 72-128 346-404 (456)
226 1lyp_A CAP18; lipopolysacchari 31.1 37 0.0013 18.3 2.3 20 77-96 2-21 (32)
227 2xze_Q Charged multivesicular 31.0 31 0.0011 20.0 2.1 15 71-85 25-39 (40)
228 1use_A VAsp, vasodilator-stimu 30.7 85 0.0029 18.6 4.0 27 68-94 10-37 (45)
229 1zoq_C CREB-binding protein, i 30.4 57 0.002 19.4 3.2 35 38-72 3-38 (47)
230 2py8_A Hypothetical protein RB 30.4 1.6E+02 0.0054 21.5 6.6 17 75-91 65-81 (147)
231 3lay_A Zinc resistance-associa 29.0 1.1E+02 0.0038 22.7 5.5 36 63-98 111-146 (175)
232 2vpq_A Acetyl-COA carboxylase; 28.7 32 0.0011 28.0 2.6 50 14-68 382-433 (451)
233 2js5_A Uncharacterized protein 28.4 1.1E+02 0.0037 19.8 4.6 36 69-106 7-42 (71)
234 3m5u_A Phosphoserine aminotran 28.3 87 0.003 25.2 5.2 82 43-136 232-326 (361)
235 2vyc_A Biodegradative arginine 27.9 1.7E+02 0.0057 26.1 7.3 20 114-134 552-571 (755)
236 3hbx_A GAD 1, glutamate decarb 26.6 2.4E+02 0.0082 23.2 7.8 58 72-133 338-402 (502)
237 2jo8_A Serine/threonine-protei 26.2 1.1E+02 0.0039 18.4 4.4 30 64-93 20-49 (51)
238 3l39_A Putative PHOU-like phos 24.6 2.2E+02 0.0075 21.2 8.2 58 52-126 41-100 (227)
239 2x2e_A Dynamin-1; nitration, h 24.2 1.4E+02 0.0046 23.6 5.6 80 16-96 227-315 (353)
240 1cxz_B Protein (PKN); protein- 23.6 99 0.0034 20.6 3.9 38 52-89 42-80 (86)
241 3ka1_A RBCX protein; chaperone 23.1 2.1E+02 0.0071 20.4 6.2 21 72-92 62-82 (126)
242 1kbh_B CREB-binding protein, n 22.3 99 0.0034 19.2 3.4 34 38-71 10-44 (59)
243 3ou5_A Serine hydroxymethyltra 22.2 2.1E+02 0.0072 24.8 6.6 69 65-135 324-395 (490)
244 2w70_A Biotin carboxylase; lig 21.4 1.3E+02 0.0043 24.4 4.9 57 14-73 381-442 (449)
245 3ohm_B 1-phosphatidylinositol- 21.2 64 0.0022 29.9 3.3 33 13-45 106-141 (885)
246 1js3_A DDC;, DOPA decarboxylas 21.2 1.9E+02 0.0066 23.3 6.0 59 73-134 373-436 (486)
247 2yus_A SWI/SNF-related matrix- 21.1 61 0.0021 20.8 2.4 31 88-125 29-59 (79)
248 1ibj_A CBL, cystathionine beta 20.8 3.5E+02 0.012 22.1 8.4 52 2-64 277-328 (464)
249 2okj_A Glutamate decarboxylase 20.6 2E+02 0.0068 23.5 6.0 40 72-114 382-424 (504)
250 4ffl_A PYLC; amino acid, biosy 20.1 1.4E+02 0.0047 23.3 4.8 35 13-47 326-360 (363)
No 1
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=7.7e-37 Score=260.69 Aligned_cols=133 Identities=33% Similarity=0.624 Sum_probs=129.9
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||+||| ||+|+|++++++++.+.+.++.++++.++|++||+||.+|+++++.+|+||+++++|++|++.|++|
T Consensus 263 ~SK~~~~------~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r 336 (420)
T 4h51_A 263 FSKNMGL------YSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAER 336 (420)
T ss_dssp CTTTSCC------GGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred ccccccc------ccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
++.+|+.|.++|++.|++++|+||+.|.|||+++||+++||+. | +++|||++++||||+
T Consensus 337 ~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~e~v~~-L-~e~~Vy~~~~gRis~ 395 (420)
T 4h51_A 337 IRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLSKAQCEY-C-QNHNIFITVSGRANM 395 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCHHHHHH-H-HHTTEECCTTCEEEG
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcCHHHHHH-H-HhCCEEEcCCCEEEe
Confidence 9999999999999999999999999999999999999999987 8 689999999999986
No 2
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.92 E-value=2.7e-25 Score=187.49 Aligned_cols=133 Identities=31% Similarity=0.534 Sum_probs=127.8
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||+||| +|.|+|.+++++++++.++++.++++.+.|..||+||.+++.++..+|+++++..+|.++++.|+++
T Consensus 247 ~SK~~~l------~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~ 320 (405)
T 3k7y_A 247 FSKNMSL------YGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQR 320 (405)
T ss_dssp CTTTSCC------TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCccCCC------ccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH----hcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 81 IISMRQSLKDNLQ----KEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 81 i~~~R~~L~~~l~----~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
+++.|..|.+.|+ +.|.+++|++++.|.|||++++++++++++ | ++++||++|+||||.
T Consensus 321 ~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~~~~~~-L-~~~gV~v~p~~Ris~ 383 (405)
T 3k7y_A 321 ITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEH-L-KTHHIYIINNGRINV 383 (405)
T ss_dssp HHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGGGGTTT-T-TTTTEECCTTSEEEG
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCHHHHHH-H-HHCCEeecCCCeEEE
Confidence 9999999999999 899888999999999999999999899877 9 999999999999985
No 3
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.89 E-value=1e-22 Score=171.24 Aligned_cols=134 Identities=37% Similarity=0.571 Sum_probs=126.9
Q ss_pred CCcccccccCCCCcccccceeEEEe--------CCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVS--------ADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLT 72 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~--------~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~ 72 (142)
.||+||+ +|.|+|++++|+ ++++.++.+.+++....|..|++||.+++.++..+|.+++++++|.+
T Consensus 275 ~SK~~g~------~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~ 348 (448)
T 3meb_A 275 FSKNFGL------YGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYD 348 (448)
T ss_dssp CTTTSCC------GGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHH
T ss_pred ccccCCC------ccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHH
Confidence 3899999 999999999999 78888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC-----CCccccccccceeecCCCHHHHHHHhhhccceeeeC-CCcccC
Q psy16706 73 EVKGMADRIISMRQSLKDNLQKEGSNK-----PWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSN-VEKCSQ 141 (142)
Q Consensus 73 El~~m~~ri~~~R~~L~~~l~~~~~~~-----~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~-~Gri~~ 141 (142)
+++.|++|++++|+.|.+.|++.+.++ +|+++..+.|||++++++++++.. |.++++||+++ +||||+
T Consensus 349 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-ll~~~gV~v~~G~gRis~ 422 (448)
T 3meb_A 349 NVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLTPEHVDY-LKEKWSIYLVKAGGRMSM 422 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCCHHHHHH-HHHHHCEEECSGGGEEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCCHHHHHH-HHHhCCEEEeCCCcEEEE
Confidence 999999999999999999999988887 799999999999999999999988 87899999999 999985
No 4
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.84 E-value=2.3e-20 Score=154.49 Aligned_cols=134 Identities=42% Similarity=0.718 Sum_probs=126.0
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||+||+ +|.|+|.+++++.+++.++.+.++++...|..|++||..++.++..+|.++.|+.+|.++++.++++
T Consensus 267 ~SK~~~~------~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 340 (420)
T 4f4e_A 267 FSKSFSL------YGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDR 340 (420)
T ss_dssp CTTTTTC------GGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCccCcC------cCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3899999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
++++|+.|.+.|++.+.++.|..+..+.|||++++++++++.. +.++++|++.+.||||+
T Consensus 341 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~l~~~gI~v~~~~Ris~ 400 (420)
T 4f4e_A 341 IRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTSAQVDR-LREEFGIYAVSTGRICV 400 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCHHHHHH-HHHHHCEECCTTSEEEG
T ss_pred HHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCCHHHHHH-HHHhCCEEecCCCeEEE
Confidence 9999999999999987665699999999999999999999988 66899999999999985
No 5
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.82 E-value=1.4e-19 Score=147.73 Aligned_cols=134 Identities=56% Similarity=0.939 Sum_probs=126.8
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||.||+ .|.|+|.+.++..+++..+.+..++....|..+++||..++.+++.+|++++++..|.++++.++++
T Consensus 248 ~sK~~~~------~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (401)
T 7aat_A 248 YAKNMGL------YGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADR 321 (401)
T ss_dssp CTTTSCC------GGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCccccc------ccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3899999 9999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
+++.|+.|.+.|++.+.++.|..++.+.|||++++++.+++.. |.++++|++.+.+|||.
T Consensus 322 ~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll~~~gi~v~~~~Ris~ 381 (401)
T 7aat_A 322 IISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVER-LTKEFSIYMTKDGRISV 381 (401)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHH-HHHHHCEECCTTCEEEG
T ss_pred HHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCCHHHHHH-HHHhCCEeccCCCeEEe
Confidence 9999999999999988777899999999999999999999987 77899999999999985
No 6
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.81 E-value=3.5e-19 Score=146.30 Aligned_cols=134 Identities=40% Similarity=0.699 Sum_probs=126.5
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||.||+ .|.|+|.+++|+.+++..+.+..++....|..|++||..++.++...|.+++++.+|.++++.++++
T Consensus 256 ~SK~~g~------~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 329 (409)
T 4eu1_A 256 FSKNFGL------YGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSR 329 (409)
T ss_dssp CTTTSSC------GGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CcccccC------ccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3899999 9999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
+++.|+.|.+.|++.+.|+.|..++.+.|||.+++++.+.+.+ |.++++|++.+.||||.
T Consensus 330 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll~~~gv~v~p~~Ri~~ 389 (409)
T 4eu1_A 330 IAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLTREQVEL-LRSEYHIYMTLNGRAAV 389 (409)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCCHHHHHH-HHHHHCEECCTTCEEEG
T ss_pred HHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCCHHHHHH-HHHcCCEEEcCCCEEEE
Confidence 9999999999999998888899999999999999999888887 87899999999999975
No 7
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.75 E-value=2.8e-17 Score=133.38 Aligned_cols=134 Identities=40% Similarity=0.646 Sum_probs=124.1
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||.||+ .|.|+|.+.+++.+++.++.+..+++...|..|++||..++.++...|.++.+..+|.++++.++++
T Consensus 245 ~SK~~~~------~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 318 (397)
T 3fsl_A 245 FSKIFSL------YGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTR 318 (397)
T ss_dssp CTTTTTC------GGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred ccccccC------cCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3899999 9999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
+++.|+.|.+.|++...++.|..+..+.|+|++++++.+++.+ +.++++|++.+.||||+
T Consensus 319 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~gi~v~~g~Ris~ 378 (397)
T 3fsl_A 319 ILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDR-LREEFGVYLIASGRMCV 378 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCHHHHHH-HHHTTCEECCTTCEEEG
T ss_pred HHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCCHHHHHH-HHHhCCEEECCCCeEEE
Confidence 9999999999999886554588888999999999999999988 65899999999999985
No 8
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.63 E-value=3e-15 Score=122.73 Aligned_cols=133 Identities=39% Similarity=0.664 Sum_probs=118.4
Q ss_pred CcccccccCCCCcccccceeEEEe----CCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVS----ADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGM 77 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~----~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m 77 (142)
||.||+ +|.|+|.+.+++ ++++..+.+..++....|..|++||..++.++...|.+.++.++|.+.++.+
T Consensus 253 sK~~~~------~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 326 (412)
T 1yaa_A 253 AKNAGM------YGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTM 326 (412)
T ss_dssp TTTSCC------GGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred CCCCCC------cCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 899999 999999988777 4666666777888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 78 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 78 ~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
++++++.|+.|.+.|++.+.++.|..++.+.|||++.+++++++.. |.++++|++.+..|||.
T Consensus 327 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~gi~v~~~~Ris~ 389 (412)
T 1yaa_A 327 SSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKR-LEETHAVYLVASGRASI 389 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHH-HHHHHCEECCTTSEEEG
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCHHHHHH-HHHhCCEEeccCcEEEE
Confidence 9999999999999999887655688888899999999999999977 76889999999889875
No 9
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.62 E-value=4.2e-15 Score=120.66 Aligned_cols=133 Identities=26% Similarity=0.531 Sum_probs=119.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+++++++.++.+...+....|..|++||..++.++...|.+.+++..|.+.++.+++++
T Consensus 242 sK~~~~------~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~ 315 (394)
T 2ay1_A 242 SKNFGI------YRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGM 315 (394)
T ss_dssp TTTTTC------GGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcC------cCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 899999 99999999988888888888888888788999999899999999999999989999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
+..|+.|.+.|++.+.++.|..++.+.|+|++++++++++.+ +.++++|++.+..|||+
T Consensus 316 ~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~l~~~gi~v~~~~Ris~ 374 (394)
T 2ay1_A 316 LRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKR-IKEEFGIYMVGDSRINI 374 (394)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHHHHHH-HHHHHCEECCTTCEEEG
T ss_pred HHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCHHHHHH-HHHhCCEEecCCCeEEe
Confidence 999999999999887555688888889999999999888887 65889999999999885
No 10
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.61 E-value=1.2e-14 Score=119.35 Aligned_cols=128 Identities=20% Similarity=0.242 Sum_probs=116.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||+||+ .|.|+|.+.+++++++.++.+........+..|++++..++.++..+|.++++.+.|.++++.+++++
T Consensus 261 sK~~~~------~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 334 (418)
T 3rq1_A 261 SKGFTM------YGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLI 334 (418)
T ss_dssp TTTTTC------CSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcC------cCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 899999 99999999999999999999998888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHhhhccceeeeCCC---ccc
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVRRKLIHDRSLKLSNVE---KCS 140 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-~~~qv~~~L~~~~~Iyl~~~G---ri~ 140 (142)
++.|+.|.+.|++.| |..++.+.|||.++.+ +++++.+.| .+++|++.+.+ |||
T Consensus 335 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~iRis 392 (418)
T 3rq1_A 335 RDRADIFKQEAAQVG----LPMLPYRGGFFITIPTDSANAICEEL-KKEHIYVIALANGIRIA 392 (418)
T ss_dssp HHHHHHHHHHHHHHT----CCCCCCCSSSEEEEECTTHHHHHHHH-HHTTEECEECSSEEEEE
T ss_pred HHHHHHHHHHHHhcC----CCCCCCCceEEEEcCCCCHHHHHHHH-HhCCEEEecCCCCeEEE
Confidence 999999999998875 7788899999999876 788888856 78999999876 655
No 11
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.61 E-value=1.2e-14 Score=118.97 Aligned_cols=133 Identities=44% Similarity=0.769 Sum_probs=119.7
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+.+++++..+.+..++....+.+|++||..++.++...|.+.++..+|.+.++.+++++
T Consensus 257 sK~~~~------~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 330 (412)
T 1ajs_A 257 SKNFGL------YNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRI 330 (412)
T ss_dssp TTTSCC------GGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred ccccCC------CCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHH
Confidence 899999 99999999887778888788888888888999999888999999999999888889999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
++.|+.|.+.|++.+.|+.|..+..+.|||++.+++.+.+.. +.++++|++.+.+|||.
T Consensus 331 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~gv~v~~~~Ris~ 389 (412)
T 1ajs_A 331 LSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEY-LINQKHIYLLPSGRINM 389 (412)
T ss_dssp HHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCHHHHHH-HHHTTCEECCTTSEEEG
T ss_pred HHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCCHHHHHH-HHHhCCEEecCCcEEEe
Confidence 999999999999987666788888899999999999888887 66899999999999875
No 12
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.60 E-value=1e-14 Score=118.17 Aligned_cols=133 Identities=38% Similarity=0.638 Sum_probs=117.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+++++++..+.+...+....|..|+.||..++.++...|.+.+++..|.+.++.+++++
T Consensus 245 sK~~~~------~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~ 318 (396)
T 2q7w_A 245 SXNFGL------YNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRI 318 (396)
T ss_dssp TTTTTC------GGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHH
T ss_pred cccccc------cccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Confidence 899999 99999999887778877777888888888899999999999999999999889999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCCcccC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVEKCSQ 141 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~Gri~~ 141 (142)
++.|+.|.+.|++.+.++.|..++.+.|||++++++++.+.. +.++++|++.+..|||.
T Consensus 319 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~gv~v~~~~Ris~ 377 (396)
T 2q7w_A 319 QRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLR-LREEFGVYAVASGRVNV 377 (396)
T ss_dssp HHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHH-HHHHHCEECCTTCEEEG
T ss_pred HHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCCHHHHHH-HHHhcCeeecCCceEEE
Confidence 999999999999887655588888899999999999888887 55889999999889875
No 13
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.52 E-value=1.3e-13 Score=113.07 Aligned_cols=128 Identities=16% Similarity=0.143 Sum_probs=113.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+.+.+++.++.+........++.|++++..++..+..+|.++++.+ |.++++.+++++
T Consensus 260 sK~~~~------~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~ 332 (413)
T 3t18_A 260 SKSHTA------YGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKI-YEQELVDLRNML 332 (413)
T ss_dssp HHHTTC------GGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHH-HHHHHHHHHHHH
T ss_pred CccCCC------cCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHH-HHHHHHHHHHHH
Confidence 799999 9999999999888999999998887888899999999999999999999988877 999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHhhhccceeeeCCC---cccC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVRRKLIHDRSLKLSNVE---KCSQ 141 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-~~~qv~~~L~~~~~Iyl~~~G---ri~~ 141 (142)
.+.|+.+.+.|++.+ |..++.+.|||.++.+ +.+++.++| .+++|++.+.+ |||+
T Consensus 333 ~~~~~~l~~~l~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~g~~~iRis~ 391 (413)
T 3t18_A 333 KSRADVFVTAAKENK----LTMIPYFGGFFTFIPTDKAFDIVKDL-EKENIFTIPSAKGIRVAI 391 (413)
T ss_dssp HHHHHHHHHHHHHTT----CCCBCCCSSSCEEEECSCHHHHHHHH-HHTTEECEECSSEEEECT
T ss_pred HHHHHHHHHHHHHcC----CCccCCCceEEEEeCCCCHHHHHHHH-HhCCEEEecCCCceEEEE
Confidence 999999999998875 7788889999998865 788888867 78999999865 6653
No 14
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.39 E-value=3.7e-12 Score=108.87 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=99.0
Q ss_pred Cccc-ccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCCh----hhHHHHHHHHHH
Q psy16706 2 KKNY-GIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDP----KLKSQWLTEVKG 76 (142)
Q Consensus 2 SKnf-gL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp----~L~~~W~~El~~ 76 (142)
||+| |+ +|.|+|.+.+++.+++.++.+.. .+..+++||..++.++..+|.+| ..+++|.+|++.
T Consensus 316 SK~~~g~------~G~R~G~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 384 (500)
T 3tcm_A 316 SKGYYGE------CGKRGGYFEITGFSAPVREQIYK-----IASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDG 384 (500)
T ss_dssp SSTTTCC------GGGCCEEEEEESCCTTHHHHHHH-----HHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHH
T ss_pred CccCCCC------CccceEEEEEeCCCHHHHHHHHH-----HHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHH
Confidence 8999 99 99999999999888877776654 23578899999999999999965 478899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CCCHH--------------H-HHHHhhhccceeeeCC
Q psy16706 77 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNAT--------------Q-VRRKLIHDRSLKLSNV 136 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~--gl~~~--------------q-v~~~L~~~~~Iyl~~~ 136 (142)
+++++++.|+.|.+.|++. || |..++.+.|||+++ .+++. . +.+ |.++++|++++.
T Consensus 385 ~~~~l~~~~~~l~~~L~~~--~g-~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~-ll~~~gI~v~pg 457 (500)
T 3tcm_A 385 ILASLARRAKALEHAFNKL--EG-ITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALR-LLESTGIVVVPG 457 (500)
T ss_dssp HHHHHHHHHHHHHHHHHTS--TT-EECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHH-HHHHHCEECEES
T ss_pred HHHHHHHHHHHHHHHHhcC--CC-cEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHH-HHHHCCEEEEeC
Confidence 9999999999999999876 33 88999999999995 33332 1 335 668899999853
No 15
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.30 E-value=5.4e-12 Score=104.70 Aligned_cols=121 Identities=14% Similarity=0.122 Sum_probs=92.7
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||+||+ +|.|+|++.+..++....+.+.+++....+.. .+||..++.++..+|.+.. .+| ++.+++++
T Consensus 262 sK~~~~------~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~a~~~~L~~~~--~~~---~~~~~~~~ 329 (427)
T 3dyd_A 262 AKRWLV------PGWRLGWILIHDRRDIFGNEIRDGLVKLSQRI-LGPCTIVQGALKSILCRTP--GEF---YHNTLSFL 329 (427)
T ss_dssp TTTSSC------GGGCCEEEEEECSTTSSHHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHSC--HHH---HHHHHHHH
T ss_pred cccCCC------cCcceEEEEecCcchhhHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHhcC--HHH---HHHHHHHH
Confidence 899999 99999998776554433455777777776664 5688899999999998532 334 56778899
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------HHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~---------~~qv~~~L~~~~~Iyl~~~G 137 (142)
+++|+.|.+.|++. |+ |..+..+.|||+++.++ ..++..+|.++++|++.+.+
T Consensus 330 ~~~~~~l~~~L~~~--~g-~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~ 391 (427)
T 3dyd_A 330 KSNADLCYGALAAI--PG-LRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPAT 391 (427)
T ss_dssp HHHHHHHHHHHHHS--TT-EEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGG
T ss_pred HHHHHHHHHHHhcC--CC-ceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCc
Confidence 99999999999876 33 88888899999997654 44555448789999998764
No 16
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.25 E-value=3.5e-11 Score=99.12 Aligned_cols=125 Identities=20% Similarity=0.291 Sum_probs=102.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhC-ChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILG-DPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~-dp~L~~~W~~El~~m~~r 80 (142)
||.||+ .|.|+|.+.+++++++.++.+........|+.+.++|..++.++...|. +. .|.++++.++++
T Consensus 270 sK~~~~------~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~ 339 (430)
T 2x5f_A 270 TKEFFA------WGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK----QFDKEIEQNIQT 339 (430)
T ss_dssp HHHTTC------GGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH----HHHHHHHHHHHH
T ss_pred ccCCCC------CCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh----HHHHHHHHHHHH
Confidence 799999 9999999998888888888888766667787888999999999999998 75 689999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecC---CCHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG---LNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g---l~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++..|+.|.+.|++...+..|..++.+.|||.++. .+++++..+|.++++|++.+.
T Consensus 340 ~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 398 (430)
T 2x5f_A 340 LKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVHDVDPEALRKHLIDKYSIGVIAL 398 (430)
T ss_dssp HHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEESSSCHHHHHHHHHHHHCEECEEC
T ss_pred HHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCCCCCHHHHHHHHHHhCCEEEecC
Confidence 99999999999974311113777888899988764 467777776866699999873
No 17
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.19 E-value=2.1e-10 Score=98.30 Aligned_cols=120 Identities=13% Similarity=0.235 Sum_probs=99.4
Q ss_pred Cccc-ccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChh----hHHHHHHHHHH
Q psy16706 2 KKNY-GIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPK----LKSQWLTEVKG 76 (142)
Q Consensus 2 SKnf-gL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~----L~~~W~~El~~ 76 (142)
||.| |+ .|.|+|.+.+++.+++.++.+... +..++++|..++.++..++++|+ ...+|.+|++.
T Consensus 315 SK~~~G~------~G~R~G~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~ 383 (498)
T 3ihj_A 315 SKGYMGE------CGYRGGYMEVINLHPEIKGQLVKL-----LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKES 383 (498)
T ss_dssp SSSTTCC------SSSCCEEEEEESCCHHHHHHHHHH-----HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHH
T ss_pred ccccccC------cccceEEEEEecCCHHHHHHHHHH-----HhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHH
Confidence 8999 99 999999999988888777765542 34788999999999999999753 67789999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---------------CCCHHH--HHHHhhhccceeeeCC
Q psy16706 77 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---------------GLNATQ--VRRKLIHDRSLKLSNV 136 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~---------------gl~~~q--v~~~L~~~~~Iyl~~~ 136 (142)
+++++.+.|+.+.+.|++. || |...+.+.|||.++ |+++++ +.+ |.++++|++++.
T Consensus 384 ~~~~l~~~~~~l~~~L~~~--~g-~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~-ll~~~gI~v~pG 456 (498)
T 3ihj_A 384 VLGNLAKKAKLTEDLFNQV--PG-IHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMK-LLEETGICVVPG 456 (498)
T ss_dssp HHHHHHHHHHHHHHHHHTS--TT-EECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHH-HHHHHCBCCEEG
T ss_pred HHHHHHHHHHHHHHHHhcC--CC-cEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHH-HHHHCCEEEEeC
Confidence 9999999999999999875 44 88889999999985 445565 355 668899999873
No 18
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=98.97 E-value=1.2e-09 Score=90.32 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=91.5
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHH----HHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAA----RILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKG 76 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~----~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~ 76 (142)
-||+||+ +|.|+|++.+ + ++.++ .+.+.+....+..++++|..++..+...|.+.. .++++.
T Consensus 280 ~sK~~g~------~G~r~G~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~ 345 (449)
T 3qgu_A 280 FSKYAGF------TGVRLGWTVV--P-KALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG-----LKEMNA 345 (449)
T ss_dssp CSGGGTC------TTCCCEEEEC--C-TTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH-----HHHHHH
T ss_pred chhhcCC------ccceeEEEec--C-HHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC-----HHHHHH
Confidence 3899999 9999998765 2 22222 134456666678888999999999999998633 256778
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHhhhccceeeeCC
Q psy16706 77 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl---~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+++++++.|+.|.+.|++.+ |..+..+.|+|.++.+ +.+++..+|.++++|++.+.
T Consensus 346 ~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg 404 (449)
T 3qgu_A 346 MIKFYKENAQILKTTFTEMG----FSVYGGDDAPYIWVGFPGKPSWDVFAEILERCNIVTTPG 404 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHTT----CCEEESSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHCC----CeeeCCCCeeEEEEECCCCCHHHHHHHHHHHCCEEEecc
Confidence 89999999999999998875 8888888999999866 46666655888889999864
No 19
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=98.83 E-value=5.4e-09 Score=86.07 Aligned_cols=117 Identities=10% Similarity=0.133 Sum_probs=86.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHH---HHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKD---EAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMA 78 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~---~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~ 78 (142)
||.||+ .|.|+|.+.+ +++. ....+...+....+..++++|..++..+...|.+... ++++.++
T Consensus 269 SK~~g~------~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~ 335 (432)
T 3ei9_A 269 SNYAGF------TGVRLGWTVI--PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGL-----EAMHKVI 335 (432)
T ss_dssp HHHHCT------TTTCCEEEEC--CTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHH-----HHHHHHH
T ss_pred hhccCC------cccceEEEEE--ChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccH-----HHHHHHH
Confidence 899999 9999998544 4322 0111233455556667888998999998888875332 3467788
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHhhhccceeeeC
Q psy16706 79 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 79 ~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl---~~~qv~~~L~~~~~Iyl~~ 135 (142)
++++..|+.|.+.|++.+ |..+..+.|+|.++.+ ++.++..+|.++++|++.+
T Consensus 336 ~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 391 (432)
T 3ei9_A 336 GFYKENTNIIIDTFTSLG----YDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTP 391 (432)
T ss_dssp HHHHHHHHHHHHHHHHTT----CCEEECSSSSEEEEECTTSCHHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHHHHHHHHCC----ceecCCCcceEEEEECCCCCHHHHHHHHHHHCCEEEeC
Confidence 899999999999998874 7777778899998866 3555555587888999976
No 20
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.82 E-value=1.4e-08 Score=82.13 Aligned_cols=113 Identities=13% Similarity=0.159 Sum_probs=83.7
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.. +++. ...+....+....++|..++..+..+|.+.+ .| ++.+.+++
T Consensus 252 sK~~g~------~G~r~G~~~~---~~~~----~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~---~~~~~~~~ 312 (407)
T 3nra_A 252 SKTESL------SGYRLGVAFG---SRAI----IARMEKLQAIVSLRAAGYSQAVLRGWFDEAP---GW---MEDRIARH 312 (407)
T ss_dssp SSTTCC------GGGCCEEEEE---CHHH----HHHHHHHHHHHTSSSCHHHHGGGGGTTCCCT---TH---HHHHHHHH
T ss_pred ccccCC------CeeeEEEEEc---CHHH----HHHHHHHHhhhccCCChHHHHHHHHHHhccc---hH---HHHHHHHH
Confidence 899999 9999997654 4443 4445566677777777788888888887532 33 44567788
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
..+|+.|.+.|++. | .|..+..+.|+|.++.+ +.+++..+|.++++|++.+.
T Consensus 313 ~~~~~~l~~~L~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 369 (407)
T 3nra_A 313 QAIRDELLHVLRGC--E-GVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPG 369 (407)
T ss_dssp HHHHHHHHHHHHTS--T-TCBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHhcC--C-CceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 88899999999876 2 27777888899998754 45677666878899999864
No 21
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.78 E-value=6.1e-08 Score=79.94 Aligned_cols=113 Identities=23% Similarity=0.406 Sum_probs=83.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|++ ++++++..+.+. .. + .+.+++...+.++..+|.+.+..++ .++.+++++
T Consensus 272 sK~~g~------~G~r~G~~--~~~~~~~~~~~~----~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~ 334 (435)
T 3piu_A 272 SKDLGL------PGFRVGAI--YSNDDMVVAAAT----KM-S-SFGLVSSQTQHLLSAMLSDKKLTKN---YIAENHKRL 334 (435)
T ss_dssp SSSSCC------GGGCEEEE--EESCHHHHHHHH----HH-G-GGSCCCHHHHHHHHHHHHCHHHHHH---HHHHHHHHH
T ss_pred ecccCC------CceeEEEE--EeCCHHHHHHHH----HH-h-hcCCCCHHHHHHHHHHhcChHHHHH---HHHHHHHHH
Confidence 899999 99999987 456666555443 22 2 3445566778888899987654333 445678899
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----------HHHHHHHhhhccceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~----------~~qv~~~L~~~~~Iyl~~ 135 (142)
.+.|+.|.+.|++.+ |..++.+.|+|..+.++ ..++..+|.++++|++.+
T Consensus 335 ~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 394 (435)
T 3piu_A 335 KQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP 394 (435)
T ss_dssp HHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEE
T ss_pred HHHHHHHHHHHHhcC----CcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeC
Confidence 999999999998775 78888889999988774 235555587888999986
No 22
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.72 E-value=1.3e-07 Score=77.70 Aligned_cols=114 Identities=22% Similarity=0.371 Sum_probs=83.5
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|++. +++++.++.+.. . +..| +++..++.++..+|.+.++.++| ++.+++++
T Consensus 267 sK~~g~------~Glr~G~~~--~~~~~~~~~~~~----~-~~~~-~~~~~~~~a~~~~l~~~~~~~~~---~~~~~~~~ 329 (428)
T 1iay_A 267 SKDMGL------PGFRVGIIY--SFNDDVVNCARK----M-SSFG-LVSTQTQYFLAAMLSDEKFVDNF---LRESAMRL 329 (428)
T ss_dssp TTTSSC------GGGCEEEEE--ESCHHHHHHHHH----H-HTTS-CCCHHHHHHHHHHTTCHHHHHHH---HHHHHHHH
T ss_pred hhhcCC------CCceEEEEE--eCCHHHHHHHHH----H-Hhcc-cCCHHHHHHHHHHhcChHHHHHH---HHHHHHHH
Confidence 899999 999999874 456666555542 2 3334 56668888999999986643333 55678889
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----------HHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~----------~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.|+.|.+.|++.+ |..++.+.|+|.++.+. .+++..+|.++++|++.+.
T Consensus 330 ~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~ 390 (428)
T 1iay_A 330 GKRHKHFTNGLEVVG----IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPG 390 (428)
T ss_dssp HHHHHHHHHHHHHTT----CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEG
T ss_pred HHHHHHHHHHHHhcC----CcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCc
Confidence 888999999998874 66667778999887663 3356666877789998764
No 23
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=98.72 E-value=3.4e-09 Score=91.53 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=80.3
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHH--------------------------------HHHHHhhcCC
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQL--------------------------------KILIRAFYSS 48 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql--------------------------------~~~~R~~~S~ 48 (142)
.||.||+ +|.|+|.+. +++++..+++..++ ........++
T Consensus 311 ~SK~~g~------~G~RiG~l~--~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~ 382 (533)
T 3f6t_A 311 YSKLFGC------TGWRLGVIA--LNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAG 382 (533)
T ss_dssp SHHHHTC------GGGCEEEEE--EESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCS
T ss_pred CcccCCC------cccceEEEE--ECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccC
Confidence 3899999 999999744 44444445444332 2222334455
Q ss_pred CCchHHHHHHHHhCChhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC------
Q psy16706 49 PPIHGARIVQEILGDPKLK-----SQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------ 117 (142)
Q Consensus 49 pp~~Ga~iv~~IL~dp~L~-----~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~------ 117 (142)
+|...+.. ..++....|. ..|.+.++.+++++++.|+.|.+.|. .+ |.....+.|||.+++++
T Consensus 383 ~~~~~q~a-~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~----~~~~~~~~g~~~~~~l~~~~~~~ 456 (533)
T 3f6t_A 383 LSTPQQIM-EALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-AP----KDETDTNTHYYSLIDIYRLAEKI 456 (533)
T ss_dssp CCHHHHHH-HHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CC----CCCSTTBCCSEEEEEHHHHHHHH
T ss_pred CChHHHHH-HHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CC----ccccCCCceEEEEEehHhhhhhc
Confidence 55554443 2222223333 34677888999999999999999885 33 88888999999988663
Q ss_pred --------------HHHHHHHhhhccceeeeCC
Q psy16706 118 --------------ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 118 --------------~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.++..+|.++++|++.+.
T Consensus 457 ~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg 489 (533)
T 3f6t_A 457 YGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDG 489 (533)
T ss_dssp HCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTT
T ss_pred cchHHHHHhhccCCHHHHHHHHHHhCCEEEeCC
Confidence 3344334778999999884
No 24
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=98.71 E-value=1.4e-07 Score=76.58 Aligned_cols=114 Identities=14% Similarity=0.165 Sum_probs=84.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ +++.++. +........+++|..++.++...|.+++...+ .++.+++++
T Consensus 233 SK~~~~------~G~RiG~~~~---~~~~~~~----l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~ 296 (385)
T 1b5p_A 233 AKAFAM------TGWRIGYACG---PKEVIKA----MASVSRQSTTSPDTIAQWATLEALTNQEASRA---FVEMAREAY 296 (385)
T ss_dssp TTTTTC------GGGCCEEEEC---CHHHHHH----HHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHH---HHHHHHHHH
T ss_pred hhhcCC------cccceEEEEe---CHHHHHH----HHHHHhhccCCCCHHHHHHHHHHHhCCCcchH---HHHHHHHHH
Confidence 899999 9999999875 4444443 44444455567888888888888876433333 367788899
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g-----l~~~qv~~~L~~~~~Iyl~~~ 136 (142)
.+.|+.+.+.|++.+ |..++.+.|||.+.. .+.+++..+|. +++|++.+.
T Consensus 297 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g 351 (385)
T 1b5p_A 297 RRRRDLLLEGLTALG----LKAVRPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPG 351 (385)
T ss_dssp HHHHHHHHHHHHHHT----CCBCCCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEES
T ss_pred HHHHHHHHHHHHHCC----CeecCCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecc
Confidence 998999999998874 777778889988753 46778877686 899998764
No 25
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=98.67 E-value=2.8e-08 Score=81.82 Aligned_cols=115 Identities=15% Similarity=0.124 Sum_probs=83.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHH-------HHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQW-------LTEV 74 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W-------~~El 74 (142)
||.||+ .|.|+|.+++ .+++.++. +........+++|..++.++...|.+.. +| .+.+
T Consensus 216 SK~~g~------~GlRiG~~~~--~~~~l~~~----l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~ 280 (391)
T 3bwn_A 216 SKITGH------AGSRIGWALV--KDKEVAKK----MVEYIIVNSIGVSKESQVRTAKILNVLK---ETCKSESESENFF 280 (391)
T ss_dssp HHHHSC------GGGCEEEEEE--CCHHHHHH----HHHHHHHHHSSCCHHHHHHHHHHHHHHH---HHTTCCCTTTSHH
T ss_pred hhhcCC------CccceEEEEe--cCHHHHHH----HHHHhcccccCCCHHHHHHHHHHHhCcc---hhccccccHHHHH
Confidence 899999 9999997755 45554444 4444444557788899999999998653 23 4557
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccc-------------cccccceeecCCC-HHHHHHHhhhccceeeeC
Q psy16706 75 KGMADRIISMRQSLKDNLQKEGSNKPWNHI-------------TDQIGMFCYTGLN-ATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 75 ~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i-------------~~q~GmF~~~gl~-~~qv~~~L~~~~~Iyl~~ 135 (142)
+.+++++++.|+.+.+.|++.+ + +... ..+.|||.++.++ .+.+.. +.++++|++.+
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~-~l~~~gV~v~p 351 (391)
T 3bwn_A 281 KYGREMMKNRWEKLREVVKESD--A-FTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVS-ELRRHKVMSRA 351 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCS--S-EECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHH-HHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--C-cccccCCccccccccccCCCcceEEEecCCcHHHHHH-HHHHCCEEEcc
Confidence 7889999999999999998752 2 3222 1467899999885 456766 44789999987
No 26
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=98.66 E-value=2.5e-08 Score=80.87 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=85.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCC-hhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGD-PKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~d-p~L~~~W~~El~~m~~r 80 (142)
||.||+ .|.|+|++.. +++.++ ++....+....++|..++..+...|.+ ......|.+.++.++++
T Consensus 239 sK~~g~------~G~r~G~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 3e2y_A 239 GKTFSV------TGWKLGWSIG---PAHLIK----HLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKE 305 (410)
T ss_dssp HHHSSC------GGGCCEEEEC---CHHHHH----HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHH
T ss_pred hhhcCC------CCceEEEEEE---CHHHHH----HHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHH
Confidence 799999 9999997653 444433 344455555556677788888887764 22333456667788999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH----------------HHHHHHhhhccceeeeCCCc
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA----------------TQVRRKLIHDRSLKLSNVEK 138 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~----------------~qv~~~L~~~~~Iyl~~~Gr 138 (142)
++..|+.|.+.|++.+ |..+..+.|+|.++.+.. +.+.+ |.++++|++.+.+.
T Consensus 306 ~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll~~~gv~v~~g~~ 374 (410)
T 3e2y_A 306 LEVKRDRMVRLLNSVG----LKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKW-MTKHKKLTAIPVSA 374 (410)
T ss_dssp HHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHH-HHHHHSEECEEGGG
T ss_pred HHHHHHHHHHHHHHCC----CeecCCCccEEEEEEchhhhcccccccccccCHHHHHHH-HHHHcCEEEeCchh
Confidence 9999999999998874 777888999999764421 44444 76889999987543
No 27
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=98.59 E-value=4.8e-08 Score=79.61 Aligned_cols=119 Identities=18% Similarity=0.163 Sum_probs=84.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhH-HHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLK-SQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~-~~W~~El~~m~~r 80 (142)
||.||+ .|.|+|.+.. +++.++. +....+....++|..++..+...|.++... ..|.+.++.++++
T Consensus 246 sK~~g~------~G~r~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 312 (422)
T 3fvs_A 246 GKTFSA------TGWKVGWVLG---PDHIMKH----LRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQA 312 (422)
T ss_dssp HHHHTC------GGGCCEEEEC---CHHHHHH----HHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHH
T ss_pred hhccCC------ccceEEEEEe---CHHHHHH----HHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHH
Confidence 799999 9999998754 4444333 444445545556667888888887753322 2344556778899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-----------------HHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-----------------TQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~-----------------~qv~~~L~~~~~Iyl~~~G 137 (142)
+++.|+.|.+.|++.+ +..+..+.|+|.++.++. .++..+|.++++|++.+.+
T Consensus 313 ~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~ 382 (422)
T 3fvs_A 313 MQRCRDHMIRSLQSVG----LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVS 382 (422)
T ss_dssp HHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGG
T ss_pred HHHHHHHHHHHHHHcC----CeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcH
Confidence 9999999999998874 777788999999987642 2444447788999998744
No 28
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=98.55 E-value=1.2e-06 Score=70.99 Aligned_cols=116 Identities=12% Similarity=0.131 Sum_probs=83.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHH-HHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKG-MADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~-m~~r 80 (142)
|| |++ .|.|+|.+.. +++.+ .++....+....+++..++.++..+|.+.+ |.+++.. ++++
T Consensus 249 sK-~~~------~G~r~G~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~ 310 (417)
T 3g7q_A 249 SK-LGL------PGSRCGIIIA---NDKTI----TAIANMNGIISLAPGGMGPAMMCEMIKRND----LLRLSETVIKPF 310 (417)
T ss_dssp GG-GTC------TTSCCEEEEC---CHHHH----HHHHHHHHHHCCCCCSHHHHHHHHHHHTTC----HHHHHHHTHHHH
T ss_pred hh-ccC------CCcceEEEEe---CHHHH----HHHHHhhcceeeCCCcHHHHHHHHHHcCcc----hHHHHHHHHHHH
Confidence 78 788 9999996433 44444 445555566666788889999999998765 4454544 6777
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.+.|..+.+.|++.-....|.....+.|+|.++ +++.+++..+| .+++|++.+.
T Consensus 311 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g 370 (417)
T 3g7q_A 311 YYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRL-KARGVLMVPG 370 (417)
T ss_dssp HHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHH-HHTTEECEEG
T ss_pred HHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHH-HHCCEEEECc
Confidence 7777777777776642221367777789999987 46788888867 6889999763
No 29
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=98.54 E-value=8.4e-07 Score=70.89 Aligned_cols=108 Identities=18% Similarity=0.212 Sum_probs=80.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ +++.++.+.. .+..|+ ++..++..+...|.+. +.++.+++++
T Consensus 226 sK~~~~------~G~r~G~~~~---~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~l~~~-------~~~~~~~~~~ 283 (365)
T 3get_A 226 SKLYGL------GGLRIGYGIA---NANIISAFYK-----LRAPFN-VSNLALKAAVAAMDDD-------EFTEKTLENN 283 (365)
T ss_dssp SSTTSC------TTTCCEEEEE---CHHHHHHHHH-----HSCTTC-SCHHHHHHHHHHHTCH-------HHHHHHHHHH
T ss_pred chHhcC------cchheEEEEc---CHHHHHHHHH-----hcCCCC-cCHHHHHHHHHHhCCH-------HHHHHHHHHH
Confidence 899999 9999998876 6666655543 233454 7778889999999863 3466778888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl---~~~qv~~~L~~~~~Iyl~~~G 137 (142)
...|+.|.+.|++.+ +..++ ..|.|.++.+ +.+++..+|. +++|++.+.+
T Consensus 284 ~~~~~~l~~~l~~~g----~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~ 336 (365)
T 3get_A 284 FSQMELYKEFAKKHN----IKIID-SYTNFITYFFDEKNSTDLSEKLL-KKGIIIRNLK 336 (365)
T ss_dssp HHHHHHHHHHHHHTT----CEECC-CSSSEEEEECSSSCHHHHHHHHH-TTTEECEECG
T ss_pred HHHHHHHHHHHHhCC----CEECC-CCCeEEEEECCCCCHHHHHHHHH-HCCEEEEECc
Confidence 888999999998874 55444 4567777765 6788888784 5799998764
No 30
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=98.51 E-value=5.5e-07 Score=72.75 Aligned_cols=112 Identities=13% Similarity=0.246 Sum_probs=82.4
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||.||+ .|.|+|.+.+ +++. ...+....+....++|..++..+...|.+ .+.++.++++
T Consensus 228 ~sK~~g~------~G~r~G~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~~~~~~~~~ 287 (391)
T 3h14_A 228 FSKYFSM------TGWRVGWMVV---PEDQ----VRVVERIAQNMFICAPHASQVAALAALDC-------DAELQANLDV 287 (391)
T ss_dssp SSSTTCC------TTSCCEEEEC---CGGG----HHHHHHHHHHTTCCCCHHHHHHHHHHTTC-------HHHHHHHHHH
T ss_pred chhccCC------ccceeEEEEe---CHHH----HHHHHHHHhhhccCCCHHHHHHHHHHhCC-------hHHHHHHHHH
Confidence 3899999 9999998875 3333 33455556666677888888888777763 2456677888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcc-ccccccceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~-i~~q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+...|+.|.+.|++.+ +.. +..+.|+|.++ +.+.+++..+|.++++|++.+.
T Consensus 288 ~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 345 (391)
T 3h14_A 288 YKANRKLMLERLPKAG----FTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPG 345 (391)
T ss_dssp HHHHHHHHHHHHHHHT----CCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHcC----CCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCc
Confidence 9999999999998875 333 45677898876 4577888776878889999763
No 31
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.50 E-value=6.4e-07 Score=72.18 Aligned_cols=110 Identities=13% Similarity=0.085 Sum_probs=79.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+. + +++.++. +....+....++|..++..+...|.+. +.++.+++++
T Consensus 244 sK~~~~------~G~r~G~~~--~-~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~ 303 (396)
T 3jtx_A 244 SKRSNV------PGLRSGFVA--G-DAELLKN----FLLYRTYHGSAMSIPVQRASIAAWDDE-------QHVIDNRRLY 303 (396)
T ss_dssp TTTSSC------GGGCCEEEE--E-CHHHHHH----HHHHHHHHTCCCCHHHHHHHHHHHHCC-------HHHHHHHHHH
T ss_pred ccccCC------cccceEEEE--e-CHHHHHH----HHHHHhhcccCCCHHHHHHHHHHhCCH-------HHHHHHHHHH
Confidence 899999 999999863 2 5554444 444444555677778888888888762 3466778888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~---~~qv~~~L~~~~~Iyl~~~ 136 (142)
...|+.+.+.|++. +.....+.|+|.++.++ .+++..+|.++++|++.+.
T Consensus 304 ~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 356 (396)
T 3jtx_A 304 QEKFERVIPILQQV-----FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPG 356 (396)
T ss_dssp HHHHHHHHHHHTTT-----SCCCCCSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHhc-----CCccCCCeeEEEEEECCCCCHHHHHHHHHHHCCEEEeCC
Confidence 88888888888764 34456678999988664 5666666878899999763
No 32
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.50 E-value=6e-07 Score=72.94 Aligned_cols=109 Identities=13% Similarity=0.144 Sum_probs=80.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|.+.+ +++.++. +.........++|..++..+...|.+. ++.+++++
T Consensus 245 sK~~~~------~G~r~G~l~~---~~~~~~~----l~~~~~~~~~~~~~~~~~a~~~~l~~~---------~~~~~~~~ 302 (389)
T 1o4s_A 245 SKSHSM------TGWRVGYLIS---SEKVATA----VSKIQSHTTSCINTVAQYAALKALEVD---------NSYMVQTF 302 (389)
T ss_dssp TTTTTC------GGGCCEEEEC---CHHHHHH----HHHHHHHHTCSCCHHHHHHHHHHTTCC---------CHHHHHHH
T ss_pred hhhcCC------cccceEEEEe---CHHHHHH----HHHHhhhcccCCCHHHHHHHHHHHhcc---------HHHHHHHH
Confidence 899999 9999998875 4444443 444444444556667788888888763 55677888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl--~~~qv~~~L~~~~~Iyl~~~ 136 (142)
.+.|+.|.+.|++.+ |..+..+.|+|.++.+ +.+++..+|.++++|++.+.
T Consensus 303 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g 355 (389)
T 1o4s_A 303 KERKNFVVERLKKMG----VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPG 355 (389)
T ss_dssp HHHHHHHHHHHHHTT----CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHhcC----CeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCc
Confidence 888888888898763 6666777899988765 67888776876899998764
No 33
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=98.48 E-value=1.5e-06 Score=70.99 Aligned_cols=112 Identities=17% Similarity=0.259 Sum_probs=78.6
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|++.+ +++.++.+.. .......+++..++..+...|.+. .+| ++.+++++
T Consensus 244 sK~~~~------~G~r~G~~~~---~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~ 304 (412)
T 2x5d_A 244 SKSYNM------AGWRIGFMVG---NPELVSALAR----IKSYHDYGTFTPLQVAAIAALEGD---QQC---VRDIARQY 304 (412)
T ss_dssp C-CCSC------TTSCCEEEEE---CHHHHHHHHH----HHHHHCCCCCHHHHHHHHHHHHSC---SHH---HHHHHHHH
T ss_pred ccccCC------cccceEEEEc---CHHHHHHHHH----HHhhhccCCCHHHHHHHHHHHhCC---HHH---HHHHHHHH
Confidence 899999 9999999885 5555555443 222223445556777777777653 134 56677888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-------~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.|+.|.+.|++.+ |..++.+.|+|.++.+ +.+++..+|.++++|++.+.
T Consensus 305 ~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 362 (412)
T 2x5d_A 305 QQRRDVLVKGLREAG----WMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPG 362 (412)
T ss_dssp HHHHHHHHHHHHHHT----CCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHCC----CEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCc
Confidence 888888989998874 6677778899887644 46677776877789998753
No 34
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=98.47 E-value=1.8e-06 Score=68.96 Aligned_cols=115 Identities=9% Similarity=0.099 Sum_probs=84.0
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHH-hhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIR-AFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R-~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||+ .|.|+|.+. +++++..+.+.. ..+ ..+++++..++..+...|.+. .+| ++.++++
T Consensus 229 sK~~~~------~G~r~G~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~ 290 (383)
T 3kax_A 229 SKTFNI------AGLQASIII--IPNEKLRQAFTS----IQYRQGFHGLNIFAYTAMQSAYTEC---NDW---LNEIRFY 290 (383)
T ss_dssp HHHHTC------GGGCCEEEE--CCCHHHHHHHHH----HHHHTTCCCCCHHHHHHHHHHTTTC---HHH---HHHHHHH
T ss_pred hhhccC------cchhheEEE--eCCHHHHHHHHH----HHhhcccCCCCHHHHHHHHHHHHhh---HHH---HHHHHHH
Confidence 799999 999999854 466666555443 322 235678888888888888763 234 5667888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+++.|+.|.+.|++.- | .+..+..+.|||.++ |.+.+++..+|.++++|++.+.
T Consensus 291 ~~~~~~~l~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 349 (383)
T 3kax_A 291 IEDNAKFACEYIKDHI-P-TLSVMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPG 349 (383)
T ss_dssp HHHHHHHHHHHHHHHC-T-TCEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEES
T ss_pred HHHHHHHHHHHHHhhC-C-CceEecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECc
Confidence 8888999998888741 2 277788899998854 3577888887877899999864
No 35
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.46 E-value=1.1e-06 Score=72.48 Aligned_cols=118 Identities=14% Similarity=0.099 Sum_probs=83.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||. ++ .|.|+|.+.+ +++.+ ..+....+....++|..++..+...|.++ ..|.+.++.+++++
T Consensus 257 SK~-~~------~GlriG~~~~---~~~l~----~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~ 319 (422)
T 3d6k_A 257 SKI-TH------AGSGVSFFAS---SKENI----EWYASHANVRGIGPNKLNQLAHAQFFGDV---AGLKAHMLKHAASL 319 (422)
T ss_dssp TTT-SC------TTSSCEEEEC---CHHHH----HHHHHHHHHHCSCCCHHHHHHHHHHHCSH---HHHHHHHHHHHHHH
T ss_pred hhh-cC------cccceEEEEe---CHHHH----HHHHHHHHhhcCCCCHHHHHHHHHHHhCc---chHHHHHHHHHHHH
Confidence 787 77 8999998764 34443 34555555555677889999999999973 34666777888888
Q ss_pred HHHHHHHHHHHHhcCCC-CCCccccccccceeecCCC---HHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYTGLN---ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~-~~w~~i~~q~GmF~~~gl~---~~qv~~~L~~~~~Iyl~~~G 137 (142)
++.|+.+.+.|++.-.. +.|..+..+.|+|.++.++ .+++.. +..+++|++.+.|
T Consensus 320 ~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~-~l~~~gV~v~~~g 378 (422)
T 3d6k_A 320 APKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVE-LAKEAGIALTGAG 378 (422)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTCHHHHHH-HHHHTTEECCCTT
T ss_pred HHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCCHHHHHH-HHHHCCeEEEcCc
Confidence 88888777777652111 1255556678999998663 677877 4478999998843
No 36
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=98.45 E-value=1.4e-06 Score=68.58 Aligned_cols=109 Identities=15% Similarity=0.273 Sum_probs=75.5
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ +++..+.+.. . ....+++..++..+...|.+.+. |. ...+++
T Consensus 197 sK~~g~------~G~r~G~~~~---~~~~~~~l~~----~--~~~~~~~~~~~~a~~~~l~~~~~---~~----~~~~~~ 254 (337)
T 3p1t_A 197 SKSYGL------AGLRLGALFG---PSELIAAMKR----K--QWFCNVGTLDLHALEAALDNDRA---RE----AHIAKT 254 (337)
T ss_dssp SSTTCC------TTTCCEEEEC---CHHHHHHHHT----T--SCTTCSCHHHHHHHHHHHTCHHH---HH----HHHHHH
T ss_pred chhccC------cchheEEEEe---CHHHHHHHHh----h--cCCCCCCHHHHHHHHHHhCCHHH---HH----HHHHHH
Confidence 899999 9999996653 5555544432 1 23456677788888888987432 22 233445
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.|+.|.+.|++.+ |..++.+.+|+.+...+.+++.+.| .+++|++.+..
T Consensus 255 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~ 305 (337)
T 3p1t_A 255 LAQRRRVADALRGLG----YRVASSEANFVLVENAAGERTLRFL-RERGIQVKDAG 305 (337)
T ss_dssp HHHHHHHHHHHHHTT----CCBCCCSSSEEEEECTTTHHHHHHH-HHTTEECEEGG
T ss_pred HHHHHHHHHHHHHCc----CEECCCCCeEEEEEcCCHHHHHHHH-HHCCeEEEECc
Confidence 556788888888874 7777778777777666777887746 67899998754
No 37
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=98.44 E-value=4.8e-07 Score=73.09 Aligned_cols=113 Identities=14% Similarity=0.242 Sum_probs=81.0
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhh-cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAF-YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~-~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||+ .|.|+|.+.+- ++-.....+...+....+.. +.++|..++..+...|.+.+. +++
T Consensus 247 sK~~~~------~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----------~~~ 308 (398)
T 3ele_A 247 SKSLSL------PGERIGYVLVP-DEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATGD-----------INA 308 (398)
T ss_dssp TTTSSC------TTTCCEEEECC-TTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCCC-----------HHH
T ss_pred hhcCCC------ccceeEEEEEc-chhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHHH-----------HHH
Confidence 899999 99999997542 22112223555565555554 677888888888888887652 456
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl---~~~qv~~~L~~~~~Iyl~~~G 137 (142)
+...|+.|.+.|++.+ |..+..+.|+|.++.+ +++++.+.| .+++|++.+..
T Consensus 309 ~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~ 363 (398)
T 3ele_A 309 YKENRDLLYEGLTRIG----YHCFKPDGAFYMFVKALEDDSNAFCEKA-KEEDVLIVAAD 363 (398)
T ss_dssp HHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECSSSCHHHHHHHH-HTTTEECEESG
T ss_pred HHHHHHHHHHHHHHcC----CeecCCCeeEEEEEEcCCCCHHHHHHHH-HHCCEEEeCcc
Confidence 6677788888888774 7778889999888755 577888757 68899998743
No 38
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=98.42 E-value=2.9e-06 Score=68.30 Aligned_cols=114 Identities=13% Similarity=0.206 Sum_probs=82.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ +++..+. +.........++|..++..+...|.+.+ .| +.++.+++++
T Consensus 232 sK~~~~------~G~r~G~~~~---~~~~~~~----l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~-~~~~~~~~~~ 294 (389)
T 1gd9_A 232 SKTFAM------TGWRLGFVAA---PSWIIER----MVKFQMYNATCPVTFIQYAAAKALKDER---SW-KAVEEMRKEY 294 (389)
T ss_dssp TTTTTC------GGGCCEEEEC---CHHHHHH----HHHHHTTTTCSCCHHHHHHHHHHHTCHH---HH-HHHHHHHHHH
T ss_pred hhhcCC------cccceEEEEE---CHHHHHH----HHHHHhhhccCCCHHHHHHHHHHHhCCC---cc-hHHHHHHHHH
Confidence 899999 9999998765 3444443 4444444445667788888888888632 21 2467788889
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g-----l~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.|+.|.+.|++.+ |..+..+.|+|.++. .+.+++..+|.++++|++.+.
T Consensus 295 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 350 (389)
T 1gd9_A 295 DRRRKLVWKRLNEMG----LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPG 350 (389)
T ss_dssp HHHHHHHHHHHHHTT----CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEG
T ss_pred HHHHHHHHHHHHHcC----CeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 998999999998864 667777889988753 467788776866899999763
No 39
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=98.41 E-value=2.1e-06 Score=69.91 Aligned_cols=115 Identities=16% Similarity=0.184 Sum_probs=80.4
Q ss_pred CcccccccCCCCcccccceeEEEeCCH---HHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADK---DEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMA 78 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~---~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~ 78 (142)
||.||+ .|.|+|.+.+.++.. +.++.+ ....+.. .++|..++..+...|.+. .+| ++.++
T Consensus 244 sK~~~~------~G~r~G~~~~~~~~~~~~~l~~~l----~~~~~~~-~~~~~~~~~a~~~~l~~~---~~~---~~~~~ 306 (406)
T 1xi9_A 244 SKVYFA------TGWRLGYMYFVDPENKLSEVREAI----DRLARIR-LCPNTPAQFAAIAGLTGP---MDY---LKEYM 306 (406)
T ss_dssp TTTTCC------GGGCCEEEEEECTTCTTHHHHHHH----HHHHHHT-CCSCSHHHHHHHHHHHSC---CHH---HHHHH
T ss_pred ccccCC------CccEEEEEEEecCchhHHHHHHHH----HHHHHhh-cCCCHHHHHHHHHHHhCC---cHH---HHHHH
Confidence 799999 999999987644431 444443 3333434 456667788888888531 233 66778
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccccccccceeec------CCCHHHHHHHhhhccceeeeCC
Q psy16706 79 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT------GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 79 ~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~------gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+++++.|+.|.+.|++. |+ |..+..+.|||+++ +.+.+++..+|.++++|++.+.
T Consensus 307 ~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g 367 (406)
T 1xi9_A 307 KKLKERRDYIYKRLNEI--PG-ISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHG 367 (406)
T ss_dssp HHHHHHHHHHHHHHHTS--TT-EECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHHhC--CC-CeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 88888888888999875 32 77777788999875 3567788766866899998754
No 40
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=98.41 E-value=1.6e-06 Score=69.87 Aligned_cols=110 Identities=17% Similarity=0.246 Sum_probs=80.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|.+.+ +++.++.+.. .+..| +++..++..+...|.+.+. +.++.+++++
T Consensus 213 sK~~g~------~G~r~G~~~~---~~~~~~~l~~-----~~~~~-~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~ 272 (356)
T 1fg7_A 213 SKAFAL------AGLRCGFTLA---NEEVINLLMK-----VIAPY-PLSTPVADIAAQALSPQGI-----VAMRERVAQI 272 (356)
T ss_dssp SSTTCC------GGGCCEEEEE---CHHHHHHHHH-----HSCSS-CSCHHHHHHHHHHTSHHHH-----HHHHHHHHHH
T ss_pred hHhhcC------chhhhEEEEe---CHHHHHHHHH-----hcCCC-CCCHHHHHHHHHHhcCccH-----HHHHHHHHHH
Confidence 899999 9999998776 5555544432 25566 5677888888888886442 1367778889
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHhhhccceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-~~~qv~~~L~~~~~Iyl~~ 135 (142)
++.|+.|.+.|++.+ + +..+....|+|.++.+ +.+++..+| .+++|++.+
T Consensus 273 ~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~ 323 (356)
T 1fg7_A 273 IAEREYLIAALKEIP--C-VEQVFDSETNYILARFKASSAVFKSL-WDQGIILRD 323 (356)
T ss_dssp HHHHHHHHHHHHHST--T-EEEECCCSSSEEEEEETTHHHHHHHH-HHTTEECEE
T ss_pred HHHHHHHHHHHHhCC--C-ceEECCCCCeEEEEECCCHHHHHHHH-HHCCEEEEE
Confidence 999999999998764 2 2223345788888766 677887768 789999987
No 41
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.41 E-value=6.4e-06 Score=67.64 Aligned_cols=118 Identities=12% Similarity=0.061 Sum_probs=77.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||. ++ .|.|+|.+.. +++.+ ..+....+....++|..++.++...|.+.. .|.+.++.+++.+
T Consensus 259 SK~-~~------~G~r~G~~~~---~~~l~----~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~ 321 (427)
T 3ppl_A 259 SKI-TL------AGAGVSFFLT---SAENR----KWYTGHAGIRGIGPNKVNQLAHARYFGDAE---GVRAVMRKHAASL 321 (427)
T ss_dssp TTT-SC------TTSSCEEEEC---CHHHH----HHHHHHHHHHCSCCCHHHHHHHHHHHCSHH---HHHHHHHHHHHHH
T ss_pred hhc-cC------cCccEEEEEc---CHHHH----HHHHHHhhcccCCCCHHHHHHHHHHHhChh---hHHHHHHHHHHHH
Confidence 777 77 8999996443 34433 445555666677888899999999999832 2334444555555
Q ss_pred HHHHHHHHHHHHhc-CCCCCCccccccccceeecCCC---HHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN---ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~-~~~~~w~~i~~q~GmF~~~gl~---~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.|..+.+.|.+. ..-+.+.....+.|||.++.++ .+++.++| .+++|++.+.|
T Consensus 322 ~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~g 380 (427)
T 3ppl_A 322 APKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELA-KEAGIALTGAG 380 (427)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTTCHHHHHHHH-HHTTEECCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcchHHHHHHHH-HHCCCEEecCc
Confidence 55555555555431 1101255566678999998774 77888756 78899999844
No 42
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=98.40 E-value=2.8e-06 Score=69.54 Aligned_cols=112 Identities=15% Similarity=0.172 Sum_probs=80.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|++.+ +++.++.+ .........++|..++..+...|.+. ..| ++.+++++
T Consensus 252 sK~~g~------~G~r~G~~~~---~~~~~~~l----~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~ 312 (404)
T 2o1b_A 252 SKGYNM------SGFRVGFAVG---NKDMIQAL----KKYQTHTNAGMFGALQDAAIYALNHY---DDF---LEEQSNVF 312 (404)
T ss_dssp TTTTTC------GGGCCEEEEE---CHHHHHHH----HHHHHHHCCCCCHHHHHHHHHHHHHC---HHH---HHHHHHHH
T ss_pred chhccC------chhheEeEec---CHHHHHHH----HHHHhhccCCCCHHHHHHHHHHHhcC---HHH---HHHHHHHH
Confidence 899999 9999999643 45554443 33444444567777888888777642 233 56678888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+..|+.|.+.|++.+ |..+..+.|||..+.+ +.+++..+|.++++|++.+.
T Consensus 313 ~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g 367 (404)
T 2o1b_A 313 KTRRDRFEAMLAKAD----LPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPG 367 (404)
T ss_dssp HHHHHHHHHHHHHTT----CCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEES
T ss_pred HHHHHHHHHHHHhcC----CeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCc
Confidence 888999999998863 6777778899887644 45777666877889999763
No 43
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.39 E-value=2.7e-06 Score=68.41 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=79.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|.+.+ +++..+ .+....+....++|..++..+...|... .+| ++.+++++
T Consensus 236 sK~~~~------~G~r~G~~~~---~~~~~~----~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~ 296 (388)
T 1j32_A 236 AKTYAM------TGWRVGFLAG---PVPLVK----AATKIQGHSTSNVCTFAQYGAIAAYENS---QDC---VQEMLAAF 296 (388)
T ss_dssp TTTTTC------TTTCCEEEEC---CHHHHH----HHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHH---HHHHHHHH
T ss_pred hhccCC------cccceEEEEe---CHHHHH----HHHHHHhhcccCCCHHHHHHHHHHHhCC---cHH---HHHHHHHH
Confidence 899999 9999998764 444433 3444555544556667777776777532 233 45577888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
...|+.|.+.|++. |+ |..+..+.|+|.++ |.+.+++..+|.++++|++.+.
T Consensus 297 ~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 353 (388)
T 1j32_A 297 AERRRYMLDALNAM--PG-LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPG 353 (388)
T ss_dssp HHHHHHHHHHHHTC--TT-CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHhhC--CC-CcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeCh
Confidence 88888888999875 32 77777788998876 3467888776877789998763
No 44
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=98.38 E-value=2.3e-06 Score=68.49 Aligned_cols=116 Identities=10% Similarity=0.135 Sum_probs=82.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|++. +++++..+.+.... ....+++++..++..+...|.+. .+| ++.+++++
T Consensus 237 sK~~g~------~G~r~G~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~ 299 (391)
T 4dq6_A 237 TKTFNI------AGLQSSYVV--LPDEKDYKLLDDAF---TRIDIKRNNCFSLVATEASYNNG---ESW---LESFLEYL 299 (391)
T ss_dssp HHHHTC------GGGCCEEEE--CCSHHHHHHHHHHH---HHTTCCCCCHHHHHHHHHHHHHC---HHH---HHHHHHHH
T ss_pred hhhccC------cccceEEEE--eCCHHHHHHHHHHH---HhhcCCCCCHHHHHHHHHHHhch---HHH---HHHHHHHH
Confidence 799999 999999764 46655555544321 12245677777777777777642 234 56778888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.|+.|.+.|++.- |+ |..+..+.|||.++ +.+.+++..+|.++++|++.+.
T Consensus 300 ~~~~~~l~~~l~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 357 (391)
T 4dq6_A 300 ESNIDFAIKYINENM-PK-LKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQG 357 (391)
T ss_dssp HHHHHHHHHHHHHHC-TT-SEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEG
T ss_pred HHHHHHHHHHHHhhC-CC-CEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCc
Confidence 888999989888731 22 88888899998855 4577888887977779998763
No 45
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=98.37 E-value=5.7e-07 Score=73.53 Aligned_cols=119 Identities=12% Similarity=0.163 Sum_probs=85.7
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHH-H---HH----------HHHHHHHHhhcCCCCchHHHHHHHHhCChhhH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAA-R---IL----------SQLKILIRAFYSSPPIHGARIVQEILGDPKLK 67 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~-~---v~----------sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~ 67 (142)
||.||+ .|.|+|.+.+ +++..+ . +. ..+....+....+++..++..+...|.+.
T Consensus 259 sK~~~~------~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--- 326 (437)
T 3g0t_A 259 SKAFSY------AGQRIGVLMI---SGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC--- 326 (437)
T ss_dssp TTTTSC------GGGCCEEEEE---CHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH---
T ss_pred ccCCCC------ccceeEEEEE---CHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc---
Confidence 899999 9999998875 344433 2 00 00444555666778888899988888753
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-------cccccceeec---CCCHHHHHHHhhhccceeeeCCC
Q psy16706 68 SQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-------TDQIGMFCYT---GLNATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 68 ~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i-------~~q~GmF~~~---gl~~~qv~~~L~~~~~Iyl~~~G 137 (142)
..|...++.+++++.+.|+.|.+.|++.+ +..+ +.+.|+|.++ +.+.+++..+|. +++|++.+..
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gi~v~~~~ 401 (437)
T 3g0t_A 327 NDGEYNFRDSVIEYGRKARIMKKMFLDNG----FNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFV-RYGMCAITLK 401 (437)
T ss_dssp HTTSCCHHHHHHHHHHHHHHHHHHHHTTT----EEESSCEETTEECCSSSEEEEEETTCCHHHHHHHHH-HTTEECEEST
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHcC----CEEeccccCCCCCceeEEEEEecCCCCHHHHHHHHH-HcCeEEeecc
Confidence 33544477889999999999999998874 6666 4378998887 457888888785 5699987653
No 46
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=98.37 E-value=1.8e-06 Score=68.53 Aligned_cols=105 Identities=15% Similarity=0.133 Sum_probs=77.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ +++.++.+.. ..+. .++|..++..+...|.+. +.++.+++++
T Consensus 212 sK~~g~------~G~r~G~~~~---~~~~~~~~~~----~~~~--~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~ 269 (354)
T 3ly1_A 212 SKIHAM------AGMRVGYAVA---HPTVIALMGR----YVAG--EKINFSGVDAALASMNDS-------AFITYSKKSN 269 (354)
T ss_dssp SSTTCC------GGGCCEEEEC---CHHHHHHHGG----GTTC--SCCCHHHHHHHHHHTTCH-------HHHHHHHHHH
T ss_pred hhhccC------hhhhheeeec---CHHHHHHHHH----hcCC--CCCCHHHHHHHHHHhcCH-------HHHHHHHHHH
Confidence 799999 9999998765 5555544433 2222 567778899999999864 3456778888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHHhhhccceeee
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl--~~~qv~~~L~~~~~Iyl~ 134 (142)
...|+.|.+.|++.+ |..++ ..|+|.++.+ +.+++..+|. +++|++.
T Consensus 270 ~~~~~~l~~~l~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~ 318 (354)
T 3ly1_A 270 DVSRQILLKALEDLK----LPYLP-SEGNFVFHQLVVPLKDYQTHMA-DAGVLIG 318 (354)
T ss_dssp HHHHHHHHHHHHHHT----CCBCC-CCSSEEEEECSSCHHHHHHHHH-HTTEECC
T ss_pred HHHHHHHHHHHHHCC----CeECC-CCceEEEEECCCCHHHHHHHHH-HCCEEEe
Confidence 888999999998874 55554 4688888777 6788888674 6899987
No 47
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=98.35 E-value=3.7e-06 Score=67.26 Aligned_cols=117 Identities=14% Similarity=0.172 Sum_probs=82.4
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|++. ++|++..+.+..... ...+++++..++..+...|.+. ..| ++.+++++
T Consensus 233 sK~~g~------~G~r~G~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~ 295 (391)
T 3dzz_A 233 SKTFNL------AALHAACAI--IPNPDLRARAEESFF---LAGIGEPNLLAIPAAIAAYEEG---HDW---LRELKQVL 295 (391)
T ss_dssp HHHHTC------TTTCCEEEE--CCSHHHHHHHHHHHH---HHTCSSCCTTHHHHHHHHHHHC---HHH---HHHHHHHH
T ss_pred hhhccc------cchhheEEE--ECCHHHHHHHHHHHH---hhccCCCCHHHHHHHHHHHhcc---HHH---HHHHHHHH
Confidence 799999 999999864 466766665543221 2344566667777777666542 233 56778888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.|+.|.+.|++.- |+ +..+..+.|+|.++ |.+.+++..+|.++++|++.+..
T Consensus 296 ~~~~~~l~~~l~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 354 (391)
T 3dzz_A 296 RDNFAYAREFLAKEV-PE-VKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGN 354 (391)
T ss_dssp HHHHHHHHHHHHHHC-TT-SEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESG
T ss_pred HHHHHHHHHHHHhhC-CC-cEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCch
Confidence 888888888888731 22 77788889998765 45778888878678999998643
No 48
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=98.33 E-value=3e-06 Score=68.41 Aligned_cols=115 Identities=13% Similarity=0.151 Sum_probs=80.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHh-hcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRA-FYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~-~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||+ -|.|+|++.+ ++++.++.+.. .... .++++|..++..+...|.+. .+| ++.++++
T Consensus 237 sK~~~~------~G~r~G~~~~--~~~~~~~~l~~----~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~ 298 (399)
T 1c7n_A 237 SKTFNI------AGMGMSNIII--KNPDIRERFTK----SRDATSGMPFTTLGYKACEICYKEC---GKW---LDGCIKV 298 (399)
T ss_dssp HHHHTC------GGGCCEEEEC--CCHHHHHHHHH----HHHHTTCCCCCHHHHHHHHHHHHHC---HHH---HHHHHHH
T ss_pred hhhccc------cchheEEEEE--CCHHHHHHHHH----HHhhcccCCCCHHHHHHHHHHHhCC---hHH---HHHHHHH
Confidence 799999 9999998764 55655555443 2222 35577878888887777642 334 5567788
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g-----l~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+...|+.|.+.|++. .|+ |..+..+.|||.++. .+.+++..+|.++++|++.+.
T Consensus 299 ~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 357 (399)
T 1c7n_A 299 IDKNQRIVKDFFEVN-HPE-IKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEG 357 (399)
T ss_dssp HHHHHHHHHHHHHHH-CTT-SBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEG
T ss_pred HHHHHHHHHHHHHhh-CCC-CeEecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 888888888888873 123 777778889987543 467778776866899998763
No 49
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=98.33 E-value=3.1e-06 Score=67.84 Aligned_cols=113 Identities=14% Similarity=0.252 Sum_probs=80.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|.+.+ +++.++. +.........++|..++..+...|.+.. .+.++.+++++
T Consensus 221 sK~~~~------~G~r~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~ 282 (370)
T 2z61_A 221 SKLYAM------TGWRIGYVIS---NDEIIEA----ILKLQQNLFISAPTISQYAALKAFEKET-----EREINSMIKEF 282 (370)
T ss_dssp TTTTTC------GGGCCEEEEC---CHHHHHH----HHHHHHHHTSSSCHHHHHHHGGGGSHHH-----HHHHHHHHHHH
T ss_pred hhccCC------ccceEEEEEE---CHHHHHH----HHHHHhhcccCCCHHHHHHHHHHHhccC-----HHHHHHHHHHH
Confidence 899999 9999998653 3344443 4444444445677777777777776411 23356678888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl--~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.|+.|.+.|++.+ |..+..+.|+|.++.+ +.+++..+|.++++|++.+.
T Consensus 283 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 335 (370)
T 2z61_A 283 DRRRRLVLKYVKDFG----WEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPG 335 (370)
T ss_dssp HHHHHHHHHHHHHTT----CBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHcC----CeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCc
Confidence 888999999998763 6667778899988776 57777776866899998763
No 50
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.33 E-value=4.5e-06 Score=68.20 Aligned_cols=119 Identities=15% Similarity=0.119 Sum_probs=79.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCC--hhhHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGD--PKLKSQWLTEVKGMAD 79 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~d--p~L~~~W~~El~~m~~ 79 (142)
||. ++ .|.|+|.+.. +++ +...+....+....++|..++.++...|.+ ..+.+.+.+..+.+++
T Consensus 252 sK~-~~------~G~r~G~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (423)
T 3ez1_A 252 SKI-TF------AGAGLGFVAS---SED----NIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAP 317 (423)
T ss_dssp TTT-SC------SSSSCEEEEE---CHH----HHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHH
T ss_pred hhh-cc------CCcceEEEEe---CHH----HHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 676 66 8999996543 333 344455566667778888999999999987 4544544555555555
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHhhhccceeeeCCC
Q psy16706 80 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 80 ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl---~~~qv~~~L~~~~~Iyl~~~G 137 (142)
|...+++.|.+.|...+. .+.....+.|+|.++.+ +.+++.+.| .+++|++.+.|
T Consensus 318 ~~~~l~~~l~~~l~~~~~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~g 375 (423)
T 3ez1_A 318 KFRAVDEVLRAELGEGGE--YATWTLPKGGYFISLDTAEPVADRVVKLA-EAAGVSLTPAG 375 (423)
T ss_dssp HHHHHHHHHHHHHTTTTS--SEEECCCSBSSCEEEEESSSCHHHHHHHH-HHTTEECCCTT
T ss_pred HHHHHHHHHHHhcCcCCC--ceEEeCCCccEEEEEECCCCcHHHHHHHH-HHCCcEEecCc
Confidence 555555555554443321 24445668899998866 578888845 78999999844
No 51
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.31 E-value=8.1e-07 Score=74.31 Aligned_cols=123 Identities=10% Similarity=0.023 Sum_probs=85.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhh-HH----HHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKL-KS----QWLTEVKG 76 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L-~~----~W~~El~~ 76 (142)
||.||+ .|.|+|.+.+ +|++.++. +........+++|...+.++...|.+..- .. .|.+.++.
T Consensus 250 SK~~g~------~G~RiG~~~~--~~~~l~~~----l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~ 317 (427)
T 2hox_A 250 SKFTGH------SGSRFGWALI--KDESVYNN----LLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTF 317 (427)
T ss_dssp HHHTSC------GGGCCEEEEE--CCHHHHHH----HHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHH
T ss_pred hhcCCC------CCceEEEEEE--CCHHHHHH----HHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHH
Confidence 899999 9999998764 56655544 44444555677888888888888886321 00 23456777
Q ss_pred HHHHHHHHHHHHHHHHHhc-CC-------CCC---CccccccccceeecCCC--HHHHHHHhhhccceeeeCC
Q psy16706 77 MADRIISMRQSLKDNLQKE-GS-------NKP---WNHITDQIGMFCYTGLN--ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~-~~-------~~~---w~~i~~q~GmF~~~gl~--~~qv~~~L~~~~~Iyl~~~ 136 (142)
+++++++.|+.|.+.|++. +. |.. |.....+.|+|+++.++ .+++..+|.++++|++.+.
T Consensus 318 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg 390 (427)
T 2hox_A 318 GFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNG 390 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCC
Confidence 8888988899999999875 21 111 44456677999999885 3444444767899998764
No 52
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=98.30 E-value=4e-06 Score=66.84 Aligned_cols=109 Identities=17% Similarity=0.136 Sum_probs=78.6
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||.||+ .|.|+|.+.+ +++.++.+... +..| +++..++..+...|.+. +.++.++++
T Consensus 223 ~sK~~g~------~G~r~G~~~~---~~~~~~~l~~~-----~~~~-~~~~~~~~~~~~~l~~~-------~~~~~~~~~ 280 (363)
T 3ffh_A 223 FSKIYGL------ASARVGYGIA---DKEIIRQLNIV-----RPPF-NTTSIGQKLAIEAIKDQ-------AFIGECRTS 280 (363)
T ss_dssp SSSTTCC------SSCCCEEEEE---CHHHHHHHHHT-----CCSC-CCBHHHHHHHHHHHHCH-------HHHHHHHHH
T ss_pred chhhhcC------chhceeeeec---CHHHHHHHHHh-----CCCC-CCCHHHHHHHHHHhcCH-------HHHHHHHHH
Confidence 3899999 9999999887 66665555432 2355 46667888888888753 335567788
Q ss_pred HHHHHHHHHHHHHh-cCCCCCCccccccccceeecCC--CHHHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQK-EGSNKPWNHITDQIGMFCYTGL--NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~-~~~~~~w~~i~~q~GmF~~~gl--~~~qv~~~L~~~~~Iyl~~~G 137 (142)
+...|+.|.+.|++ .+ +..++ ..|+|.++.+ +++++.++|. +++|++.+..
T Consensus 281 ~~~~~~~l~~~l~~~~g----~~~~~-~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~ 334 (363)
T 3ffh_A 281 NANGIKQYEAFAKRFEK----VKLYP-ANGNFVLIDLGIEAGTIFSYLE-KNGYITRSGA 334 (363)
T ss_dssp HHHHHHHHHHHHHHCTT----CEECC-CCSSEEEEECSSCHHHHHHHHH-HTTEECEETT
T ss_pred HHHHHHHHHHHHhhCCC----ceECC-CCCeEEEEECCCCHHHHHHHHH-HCCeEEEeCc
Confidence 88889999999987 43 66554 4567777766 6788888785 6799988643
No 53
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=98.29 E-value=5.3e-06 Score=66.35 Aligned_cols=108 Identities=19% Similarity=0.291 Sum_probs=77.0
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ +++.++.+... +..| +++..++..+...|.+. .| ++.+++++
T Consensus 213 sK~~g~------~G~r~G~~~~---~~~~~~~~~~~-----~~~~-~~~~~~~~a~~~~l~~~----~~---~~~~~~~~ 270 (360)
T 3hdo_A 213 SKSYSL------AGMRIGLAIA---RPEVIAALDKI-----RDHY-NLDRLAQAACVAALRDQ----AY---LSECCRRI 270 (360)
T ss_dssp TTTTSC------TTSCCEEEEC---CHHHHHHHHHH-----SCSC-CSCHHHHHHHHHHHHCH----HH---HHHHHHHH
T ss_pred hHhhcC------CccceeeEee---CHHHHHHHHHh-----CCCC-CCCHHHHHHHHHHhcCH----HH---HHHHHHHH
Confidence 899999 9999998764 66665555432 2334 46668888888888863 23 56678888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeec---CCCHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---GLNATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~---gl~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.|+.|.+.|++.+ |..++. .|.|..+ +.+++++..+| .+++|++.+.+
T Consensus 271 ~~~~~~l~~~L~~~~----~~~~~~-~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~ 323 (360)
T 3hdo_A 271 RETREWFTTELRSIG----YDVIPS-QGNYLFATPPDRDGKRVYDGL-YARKVLVRHFS 323 (360)
T ss_dssp HHHHHHHHHHHHHTT----CEECCC-SSSEEEEECTTCCHHHHHHHH-HHTTEECBCCC
T ss_pred HHHHHHHHHHHHHCC----CEEcCC-CccEEEEECCCCCHHHHHHHH-HHCCEEEEECC
Confidence 888999999998874 555544 4555554 45788888867 57899998754
No 54
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.28 E-value=1.1e-05 Score=65.86 Aligned_cols=111 Identities=13% Similarity=0.216 Sum_probs=79.5
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+. +++++.++.+ ....+... ++|..++..+...|... ..| ++.+++++
T Consensus 243 sK~~g~------~G~r~G~~~--~~~~~l~~~l----~~~~~~~~-~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~ 303 (409)
T 2gb3_A 243 SKKFSA------CGARVGCLI--TRNEELISHA----MKLAQGRL-APPLLEQIGSVGLLNLD---DSF---FDFVRETY 303 (409)
T ss_dssp TTTTTC------GGGCCEEEE--CSCHHHHHHH----HHHHHHSC-CCCHHHHHHHHHHHTCC---HHH---HHHHHHHH
T ss_pred hhccCC------ccceEEEEE--ECcHHHHHHH----HHHHhccC-CCCHHHHHHHHHHHhcc---HHH---HHHHHHHH
Confidence 899999 999999876 4554444443 33334333 77778888888888651 233 55677788
Q ss_pred HHHHHHHHHHHHhcCCCCCCcc-ccccccceeecC---CCHHHHHHHhhhc-----cceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTG---LNATQVRRKLIHD-----RSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~-i~~q~GmF~~~g---l~~~qv~~~L~~~-----~~Iyl~~ 135 (142)
.+.|+.|.+.|++.+ |.. +..+.|+|+++. .+.+++..+|.++ ++|++.+
T Consensus 304 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~ 362 (409)
T 2gb3_A 304 RERVETVLKKLEEHG----LKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAP 362 (409)
T ss_dssp HHHHHHHHHHHHHTT----CCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEE
T ss_pred HHHHHHHHHHHHHcC----ceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeC
Confidence 888888888898763 666 667789998864 4678887778777 6999875
No 55
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.28 E-value=6.3e-06 Score=65.42 Aligned_cols=106 Identities=13% Similarity=0.232 Sum_probs=75.0
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|.+.+ +++..+.+.. . +..| ++|..++..+...|.+. +| ++.+++++
T Consensus 201 sK~~g~------~G~r~G~~~~---~~~~~~~l~~----~-~~~~-~~~~~~~~~~~~~l~~~----~~---~~~~~~~~ 258 (335)
T 1uu1_A 201 SKAFSL------AAQRVGYVVA---SEKFIDAYNR----V-RLPF-NVSYVSQMFAKVALDHR----EI---FEERTKFI 258 (335)
T ss_dssp TTTTTC------GGGCCEEEEE---CHHHHHHHHH----H-SCTT-CSCHHHHHHHHHHHHTH----HH---HHHHHHHH
T ss_pred hhhcCC------cccCeEEEEe---CHHHHHHHHH----h-cCCC-CcCHHHHHHHHHHhCCH----HH---HHHHHHHH
Confidence 899999 9999998876 5555544433 2 2345 67778888888888763 23 45567778
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHHhhhccceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~---~~qv~~~L~~~~~Iyl~~ 135 (142)
++.|+.|.+.|++.+ |...+ ..|+|..+.++ .+++..+|. +++|++.+
T Consensus 259 ~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~ 309 (335)
T 1uu1_A 259 VEERERMKSALREMG----YRITD-SRGNFVFVFMEKEEKERLLEHLR-TKNVAVRS 309 (335)
T ss_dssp HHHHHHHHHHHHHHT----CCBCC-CCSSEEEEECCTHHHHHHHHHHH-HHTEEEEE
T ss_pred HHHHHHHHHHHHHCC----cEEcC-CCCeEEEEECCCCCHHHHHHHHH-HCCEEEEE
Confidence 888888888888774 54444 45788877664 556766674 67999875
No 56
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=98.28 E-value=3.4e-06 Score=67.41 Aligned_cols=106 Identities=9% Similarity=0.045 Sum_probs=77.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.. +++.++. +.........++|..++..+...|.+.+ .++.+++++
T Consensus 230 sK~~g~------~G~r~G~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~ 289 (376)
T 3ezs_A 230 SKRSSA------PGLRSGFIAG---DSRLLEK----YKAFRAYLGYTSANAIQKASEAAWLDDR-------HAEFFRNIY 289 (376)
T ss_dssp TTTTTC------GGGCCEEEEE---CHHHHHH----HHHHHTTTCCCCCHHHHHHHHHHHHCSH-------HHHHHHHHH
T ss_pred hhccCC------ccceeEEEee---CHHHHHH----HHHHHhhhcCCCChHHHHHHHHHHhCcH-------HHHHHHHHH
Confidence 899999 9999998653 5555444 4444444445677788888888888632 367788889
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHhhhccceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-~~~qv~~~L~~~~~Iyl~~ 135 (142)
...|+.|.+.|+ + |. ..+.|+|.++.+ +.+++..+|.++++|++.+
T Consensus 290 ~~~~~~l~~~l~--~----~~--~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 336 (376)
T 3ezs_A 290 ANNLKLARKIFK--N----TL--IYPYSFYVYLPVQNGENFAKTLYQNEGIITLP 336 (376)
T ss_dssp HHHHHHHHHHST--T----CC--CCSBSSEEEEECSCHHHHHHHHHHHHCCBCEE
T ss_pred HHHHHHHHHHhc--C----CC--CCCcceEEEEECCCHHHHHHHHHHhCCEEEeC
Confidence 988888888876 2 55 568899998877 5777776687779999975
No 57
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.27 E-value=3.3e-06 Score=70.27 Aligned_cols=115 Identities=11% Similarity=0.110 Sum_probs=79.6
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHH-HhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILI-RAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~-R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||+ .|.|+|.+.+ .+++.++.+.. .. ...|+ +|...+..+...|.+.. +.+.++.++++
T Consensus 273 sK~~~~------~G~riG~~~~--~~~~l~~~l~~----~~~~~~~~-~~~~~~~a~~~aL~~~~----~~~~~~~~~~~ 335 (447)
T 3b46_A 273 GKSFAA------TGWRIGWVLS--LNAELLSYAAK----AHTRICFA-SPSPLQEACANSINDAL----KIGYFEKMRQE 335 (447)
T ss_dssp HHHTTC------TTSCCEEEEC--SCHHHHHHHHH----HHHHHTSS-CCHHHHHHHHHHHHHHH----HHTHHHHHHHH
T ss_pred chhcCC------cchhhEEEEe--CCHHHHHHHHH----HHhhccCC-CChHHHHHHHHHHhCCc----chHHHHHHHHH
Confidence 799999 9999998653 35655555433 22 23454 45566777777776421 23335668889
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------------------HHHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------------------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~-------------------~~qv~~~L~~~~~Iyl~~~G 137 (142)
++..|+.|.+.|++.| |..+..+.|+|.++.++ .+++..+|.++++|++.+.+
T Consensus 336 ~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~ 407 (447)
T 3b46_A 336 YINKFKIFTSIFDELG----LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPT 407 (447)
T ss_dssp HHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGG
T ss_pred HHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECch
Confidence 9999999999998875 66677788999876442 44666658778999998753
No 58
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=98.26 E-value=1.7e-06 Score=69.08 Aligned_cols=115 Identities=9% Similarity=0.061 Sum_probs=80.5
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+++ .+++..+.+. ........++|..++..+...|.+. .+.++.+++++
T Consensus 222 sK~~g~------~G~r~G~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~ 283 (377)
T 3fdb_A 222 SKAWNI------AGLKCAQIIF--SNPSDAEHWQ----QLSPVIKDGASTLGLIAAEAAYRYG------TDFLNQEVAYL 283 (377)
T ss_dssp TTTTTC------GGGCCEEEEC--CSHHHHHHHH----HSCHHHHCCCCHHHHHHHHHHHHHC------HHHHHHHHHHH
T ss_pred hHhccC------cchhheEEEe--CCHHHHHHHH----HHHHhhcCCCCHHHHHHHHHHHhcc------HHHHHHHHHHH
Confidence 799999 9999996544 5555554443 3334444667778888877777642 23466778889
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----CHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-----~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.|+.|.+.|++.- | .|..+..+.|||.++.+ +.+.+.. |.++++|++.+..
T Consensus 284 ~~~~~~l~~~L~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~gi~v~~g~ 341 (377)
T 3fdb_A 284 KNNHDFLLHEIPKRI-P-GAKITPMQATYLMWIDFRDTTIEGSPSEF-FIEKAKVAMNDGA 341 (377)
T ss_dssp HHHHHHHHHHHHHHS-T-TCEECCCSBCSEEEEECTTSCCCSCHHHH-HHHHHCEECEEGG
T ss_pred HHHHHHHHHHHHhhC-C-CceEecCCeeEEEEEECcccCCCHHHHHH-HHHhCCEEecCCh
Confidence 999999999998741 2 28888889999976644 3344555 8788899998643
No 59
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=98.26 E-value=4.6e-06 Score=68.00 Aligned_cols=111 Identities=14% Similarity=0.140 Sum_probs=76.4
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHH-hhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIR-AFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R-~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||+ .|.|+|++.+ +++.++.+.. ..+ ..|+.+| .++..+...|.+. ..| ++.++++
T Consensus 232 sK~~~~------~G~r~G~~~~---~~~~~~~l~~----~~~~~~~~~~~-~~~~a~~~~l~~~---~~~---~~~~~~~ 291 (411)
T 2o0r_A 232 AKMFNC------TGWKIGWACG---PAELIAGVRA----AKQYLSYVGGA-PFQPAVALALDTE---DAW---VAALRNS 291 (411)
T ss_dssp HHHTTC------TTTCEEEEEC---CHHHHHHHHH----HHHHHTSCCCT-THHHHHHHHHHHC---HHH---HHHHHHH
T ss_pred hhhcCC------ccceEEEEee---CHHHHHHHHH----HHhhccCCCCh-HHHHHHHHHHhCC---hHH---HHHHHHH
Confidence 799999 9999998865 4555554433 222 3455444 5555666666432 334 5567888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------CHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl------~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+...|+.|.+.|++.+ |..+..+.|+|.++.+ +.+++..+|.++++|++.+.
T Consensus 292 ~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 349 (411)
T 2o0r_A 292 LRARRDRLAAGLTEIG----FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPM 349 (411)
T ss_dssp HHHHHHHHHHHHHHHT----CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEG
T ss_pred HHHHHHHHHHHHHHcC----CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcCh
Confidence 8888999999998874 7777778899887644 45677666877899998753
No 60
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=98.26 E-value=2.7e-06 Score=68.52 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=76.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHh-hcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRA-FYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~-~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||+ -|.|+|.+.+ +++..+.+ ....+. .|+. |..++..+...|.+. .+| ++.++++
T Consensus 235 sK~~~~------~G~r~G~~~~---~~~~~~~l----~~~~~~~~~~~-~~~~~~a~~~~l~~~---~~~---~~~~~~~ 294 (386)
T 1u08_A 235 GKTYHM------TGWKVGYCVA---PAPISAEI----RKVHQYLTFSV-NTPAQLALADMLRAE---PEH---YLALPDF 294 (386)
T ss_dssp HHHTTC------GGGCCEEEEC---CHHHHHHH----HHHHHHHTSSC-CHHHHHHHHHHHHHC---THH---HHTHHHH
T ss_pred hhhcCC------cccceEEEEc---CHHHHHHH----HHHHHhhccCC-ChHHHHHHHHHHhCC---cHH---HHHHHHH
Confidence 799999 9999998764 34444443 333332 4554 445666677777532 334 4567888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------CHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl------~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+++.|+.|.+.|++.+ |..+..+.|+|.++.+ +.+++..+|.++++|++.+.
T Consensus 295 ~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 352 (386)
T 1u08_A 295 YRQKRDILVNALNESR----LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPL 352 (386)
T ss_dssp HHHHHHHHHHHTTSSS----CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEG
T ss_pred HHHHHHHHHHHHHHCC----CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 8888999989888763 7777778899988744 46777766877899998753
No 61
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=98.23 E-value=1e-05 Score=64.86 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=76.5
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|.+.. +++.++.+. ...+....++|..++..+...|.+. . +.++.+++++
T Consensus 229 sK~~~~------~G~r~G~~~~---~~~~~~~l~----~~~~~~~~~~~~~~~~a~~~~l~~~---~---~~~~~~~~~~ 289 (376)
T 2dou_A 229 SKSYNL------AGFRLGFALG---SEEALARLE----RVKGVIDFNQYAGVLRMGVEALKTP---K---EVVRGYARVY 289 (376)
T ss_dssp HHHHTC------GGGCCEEEEE---CHHHHHHHH----HHHHHHCCCSCHHHHHHHHHHHTSC---H---HHHHHHHHHH
T ss_pred hhhcCC------hhheeEEEec---CHHHHHHHH----HHHHhcccCCCHHHHHHHHHHHhCc---H---HHHHHHHHHH
Confidence 799999 9999999643 455554443 3333333456667788888888762 2 3456678888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.|+.|.+.|++. |..+..+.|+|.++-+ +.+++..+|.++ +|++.+.
T Consensus 290 ~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g 342 (376)
T 2dou_A 290 RERALGMAEALKGV-----LSLLPPRATMYLWGRLPEGVDDLEFGLRLVER-GVALAPG 342 (376)
T ss_dssp HHHHHHHHHHHTTT-----SEECCCCBSSEEEEECCTTCCHHHHHHHHHHT-TEECEEG
T ss_pred HHHHHHHHHHHHHh-----cCccCCCeeEEEEEECCCCCCHHHHHHHHHHC-CEEEcCc
Confidence 88888888888764 5666677899887644 456777768655 9998753
No 62
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.23 E-value=3.5e-06 Score=68.58 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=78.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCH-HHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADK-DEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~-~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||+ -|.|+|.+.+ +++ +..+.+...+.......|+ ++..++..+...|.+.. ..| ++.+.++
T Consensus 252 sK~~~~------~Glr~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~l~~~~--~~~---~~~~~~~ 317 (416)
T 1bw0_A 252 AKNLVV------PGWRLGWLLY--VDPHGNGPSFLEGLKRVGMLVCG-PCTVVQAALGEALLNTP--QEH---LDQIVAK 317 (416)
T ss_dssp TTTTSC------GGGCCEEEEE--ECTTCSCHHHHHHHHHHHHHHTC-SCHHHHHHHHHHHHSSC--HHH---HHHHHHH
T ss_pred hhhCCC------CCceEEEEEe--eCchhhHHHHHHHHHHHhccccC-CCcHHHHHHHHHHhccc--HHH---HHHHHHH
Confidence 899999 9999998765 333 3334444444443334564 55677888888776422 233 4556778
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecC---------CCHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG---------LNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g---------l~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++..|+.|.+.|++. |+ +..+..+.|+|.++. .+.+++..+|.++++|++.+.
T Consensus 318 ~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 379 (416)
T 1bw0_A 318 IEESAMYLYNHIGEC--IG-LAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPG 379 (416)
T ss_dssp HHHHHHHHHHHHTTS--TT-EEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHhC--CC-CcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecc
Confidence 888888888999765 33 666666789988753 356677655767899998763
No 63
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.22 E-value=1.3e-06 Score=71.22 Aligned_cols=112 Identities=10% Similarity=0.092 Sum_probs=76.7
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHH------HHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDE------AARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVK 75 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~------~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~ 75 (142)
||.||+ .|.|+|.+.+ +++-. ++.+.. ......|+++|..++..+..+|.+. +++
T Consensus 235 sK~~g~------~GlriG~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~--------~~~ 295 (400)
T 3asa_A 235 SKPLGF------AGIRLGWTVI--PQELTYADGHFVIQDWE---RFLSTTFNGASIPAQEAGVAGLSIL--------PQL 295 (400)
T ss_dssp CGGGTT------TTCCCEEEEC--CTTCBCTTSCBHHHHHH---HHHHHHCCCCCHHHHHHHHHHHHHT--------TTC
T ss_pred hhhcCC------cchheeEEee--ChhhccchhhhHHHHHH---HHhccCccCCChHHHHHHHHHhCcH--------HHH
Confidence 899999 9999998753 33210 232221 2234557778888888888888643 355
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-C----CHHHHHHHhhhccceeeeCC
Q psy16706 76 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-L----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 76 ~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g-l----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
.++++++..|+.|.+.|++.+ +..+....|+|..+. + +++++..+|.++++|++.+.
T Consensus 296 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g 357 (400)
T 3asa_A 296 EAIHYYRENSDLLRKALLATG----FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPG 357 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----CEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHCC----CeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeCh
Confidence 678888888888889998764 665555678887765 4 34455554877889998764
No 64
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.14 E-value=1.3e-05 Score=64.65 Aligned_cols=115 Identities=11% Similarity=0.146 Sum_probs=79.7
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHH--hhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIR--AFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMAD 79 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R--~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ 79 (142)
||.||+ -|.|+|.+.+ ++++..+.+. .... ..|++++..++..+...|.+. .+| ++.+++
T Consensus 232 sK~~~~------~G~r~G~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~ 293 (390)
T 1d2f_A 232 SKSFNI------PALTGAYGII--ENSSSRDAYL----SALKGRDGLSSPSVLALTAHIAAYQQG---APW---LDALRI 293 (390)
T ss_dssp HHHHTC------GGGCCEEEEE--CSHHHHHHHH----HHHHTTSCCCSCCHHHHHHHHHHHHHC---HHH---HHHHHH
T ss_pred cHhhcc------cChhheEEEE--CCHHHHHHHH----HHHhhhcccCCCCHHHHHHHHHHHhcC---HHH---HHHHHH
Confidence 799999 9999998864 5555544443 3332 356677777777776767631 344 556778
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCHHHHHHHhhhccceeeeCC
Q psy16706 80 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 80 ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g-----l~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+++..|+.|.+.|++. .|+ +..+..+.|||.++- ++.+++..+|.++++|++.+.
T Consensus 294 ~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g 353 (390)
T 1d2f_A 294 YLKDNLTYIADKMNAA-FPE-LNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPG 353 (390)
T ss_dssp HHHHHHHHHHHHHHHH-CSS-CCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEG
T ss_pred HHHHHHHHHHHHHHhh-CCC-CEEecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCc
Confidence 8888888888888873 122 666777888986542 567788776866899999763
No 65
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=98.14 E-value=1.1e-05 Score=66.26 Aligned_cols=114 Identities=12% Similarity=0.181 Sum_probs=82.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|++. ++|++.++.+.... ....+++++..++..+...|.+ ..+| ++.+.+++
T Consensus 267 sK~~g~------~G~~~G~~~--~~~~~l~~~~~~~~---~~~~~~~~n~~~~~a~~aal~~---~~~~---~~~~~~~~ 329 (421)
T 3l8a_A 267 TKTFNI------AGTKNSFAI--IQNESLRRKFQYRQ---LANNQHEVPTVGMIATQAAFQY---GKPW---LEELKTVI 329 (421)
T ss_dssp HHHHTC------GGGCCEEEE--CCSHHHHHHHHHHH---HHTTCSCCCHHHHHHHHHHHHH---CHHH---HHHHHHHH
T ss_pred hhhccC------chhheEeEE--cCCHHHHHHHHHHH---HhcccCCCCHHHHHHHHHHHhc---cHHH---HHHHHHHH
Confidence 799999 999999874 46676666554422 1345667777888777777763 2345 55667788
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCHHHHHHHhhhccceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g-----l~~~qv~~~L~~~~~Iyl~~ 135 (142)
...|+.|.+.|++. |+ +..+..+.+|+.++. ++.+++..+|.++++|++.+
T Consensus 330 ~~~~~~l~~~L~~~--~~-i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~ 385 (421)
T 3l8a_A 330 EGNIKLVIKELEAK--TK-IKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLND 385 (421)
T ss_dssp HHHHHHHHHHHHHH--CS-CEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEE
T ss_pred HHHHHHHHHHHHhC--CC-ceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEEC
Confidence 88888888888876 33 788888888887553 45667777687889999976
No 66
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=98.14 E-value=4.8e-06 Score=68.13 Aligned_cols=116 Identities=11% Similarity=0.120 Sum_probs=77.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHh-hcCCCCchHHHHHHHHhCCh--hhHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRA-FYSSPPIHGARIVQEILGDP--KLKSQWLTEVKGMA 78 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~-~~S~pp~~Ga~iv~~IL~dp--~L~~~W~~El~~m~ 78 (142)
||.||+ -|.|+|++.+ +++.++.+ ....+. +|+ ++..++..+...|.++ .+ ..|.+.++.++
T Consensus 254 sK~~~~------~G~r~G~~~~---~~~~~~~l----~~~~~~~~~~-~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~ 318 (429)
T 1yiz_A 254 GKTFSL------TGWKIGWAYG---PEALLKNL----QMVHQNCVYT-CATPIQEAIAVGFETELKRL-KSPECYFNSIS 318 (429)
T ss_dssp HHHHTC------GGGCCEEEES---CHHHHHHH----HHHHHTTTCC-CCHHHHHHHHHHHHHHHTTT-TSTTSHHHHHH
T ss_pred hhccCC------CCcceEEEEe---CHHHHHHH----HHHHhhcccC-CChHHHHHHHHHHhcccccc-cchHHHHHHHH
Confidence 799999 9999998765 44444443 333333 444 5556677777777651 00 11233466778
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----------------CHHHHHHHhhhccceeeeCC
Q psy16706 79 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----------------NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 79 ~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl----------------~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++++..|+.|.+.|++.+ |..+..+.|+|..+.+ +.+++..+|.++++|++.+.
T Consensus 319 ~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g 388 (429)
T 1yiz_A 319 GELMAKRDYMASFLAEVG----MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPP 388 (429)
T ss_dssp HHHHHHHHHHHHHHHHHT----CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCG
T ss_pred HHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCc
Confidence 888888999999998874 6767778899988644 24566665767899999764
No 67
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.13 E-value=1.1e-05 Score=64.91 Aligned_cols=107 Identities=16% Similarity=0.278 Sum_probs=75.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ + ++..+.+ ... +..|+ +|..++..+...|.+. + .++.+++++
T Consensus 230 sK~~~~------~G~r~G~~~~--~-~~~~~~l----~~~-~~~~~-~~~~~~~a~~~~l~~~----~---~~~~~~~~~ 287 (369)
T 3cq5_A 230 SKAFDF------AGGRLGYFVA--N-PAFIDAV----MLV-RLPYH-LSALSQAAAIVALRHS----A---DTLGTVEKL 287 (369)
T ss_dssp SSTTSC------GGGCCEEEEE--C-THHHHHH----HTT-SCTTC-SCHHHHHHHHHHHHTH----H---HHHTHHHHH
T ss_pred hHhcCC------cccceEEEEe--C-HHHHHHH----HHc-CCCCC-CCHHHHHHHHHHhcCH----H---HHHHHHHHH
Confidence 899999 9999998765 3 3333333 222 23454 7778888888888763 2 356677888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl--~~~qv~~~L~~~~~Iyl~~~ 136 (142)
...|+.|.+.|++.+ |..++ ..|+|..+.+ +.+++.++| .+++|++.+.
T Consensus 288 ~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~ 338 (369)
T 3cq5_A 288 SVERVRVAARLEELG----YAVVP-SESNFVFFGDFSDQHAAWQAF-LDRGVLIRDV 338 (369)
T ss_dssp HHHHHHHHHHHHHHT----CEEEC-CSSSEEEEECCSSHHHHHHHH-HHTTEECBCC
T ss_pred HHHHHHHHHHHHhCC----CEECC-CCCeEEEEECCCCHHHHHHHH-HHCCEEEEEC
Confidence 888888888888754 66554 4577766654 677887768 6889999875
No 68
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=98.11 E-value=1.7e-05 Score=65.12 Aligned_cols=116 Identities=12% Similarity=0.157 Sum_probs=77.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHH-HHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKG-MADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~-m~~r 80 (142)
||. ++ .|.|+|.+.. +++.++ .+....+....+++..++.++...+.+.++ ...+.. ++.+
T Consensus 275 sK~-~~------~G~r~G~~~~---~~~l~~----~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~ 336 (444)
T 3if2_A 275 SKI-GL------PGMRTGIIVA---DAKVIE----AVSAMNAVVNLAPTRFGAAIATPLVANDRI----KQLSDNEIKPF 336 (444)
T ss_dssp TTT-TC------GGGCCEEEEC---CHHHHH----HHHHHHHHHHSSCCCHHHHHHHHHHHTSHH----HHHHHHTHHHH
T ss_pred hhc-cC------CCCceEEEEE---CHHHHH----HHHHHHHhccCCCChHHHHHHHHHHHcCch----hHHHHHHHHHH
Confidence 784 77 9999996543 544444 444555555556677888888888887654 333333 5666
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.+.|+.+.+.|.+.-....|.....+.|+|.++ +++.+++..+| .+++|++.+.
T Consensus 337 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g 396 (444)
T 3if2_A 337 YQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL-KAKGTLIVPS 396 (444)
T ss_dssp HHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHH-HHTTEECEEG
T ss_pred HHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHH-HHCCeEEecc
Confidence 6666666666665532221366667789999887 56788888867 6889998764
No 69
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=98.08 E-value=1.7e-05 Score=63.48 Aligned_cols=115 Identities=10% Similarity=0.089 Sum_probs=78.8
Q ss_pred CCcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 1 QKKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 1 ~SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
.||.||+ .|.|+|.+.+ +++.++.+. ...+....+++..++.++...|.+ +.+.++.++++
T Consensus 220 ~sK~~~~------~G~r~G~v~~---~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~ 280 (375)
T 3op7_A 220 LSKTYSL------PGIRIGWVAA---NHQVTDILR----DYRDYTMICAGVFDDLVAQLALAH------YQEILERNRHI 280 (375)
T ss_dssp SSSSSSC------GGGCCEEEEC---CHHHHHHHT----TTGGGTTSCCCHHHHHHHHHHHHT------HHHHHHHHHHH
T ss_pred ChhhcCC------cccceEEEEe---CHHHHHHHH----HHHhhhccCCCcHHHHHHHHHHhc------cHHHHHHHHHH
Confidence 3899999 9999998765 666555443 333444445555666666666653 34456677888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeec----CCCHHHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT----GLNATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~----gl~~~qv~~~L~~~~~Iyl~~~G 137 (142)
+...++.|.+.|++. | .+..+..+.|+|.++ +.+.+++..+|.++++|++.+.+
T Consensus 281 ~~~~~~~l~~~l~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~ 338 (375)
T 3op7_A 281 LEENLAILDQWIEEE--P-LVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGN 338 (375)
T ss_dssp HHHHHHHHHHHHHHC--T-TEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGG
T ss_pred HHHHHHHHHHHHhhC--C-CceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChh
Confidence 888888888888774 2 266677788877765 34566766657788999987643
No 70
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=98.06 E-value=3.6e-05 Score=61.39 Aligned_cols=108 Identities=17% Similarity=0.203 Sum_probs=77.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||. |+ .|.|+|.+.+ +++..+.+.. .+..| +++..++..+...|.+ ..| ++.+++++
T Consensus 226 sK~-~~------~G~r~G~~~~---~~~~~~~~~~-----~~~~~-~~~~~~~~a~~~~l~~----~~~---~~~~~~~~ 282 (367)
T 3euc_A 226 SKL-GL------AGIRLGYVAG---DPQWLEQLDK-----VRPPY-NVNVLTEATALFALEH----VAV---LDEQAAQL 282 (367)
T ss_dssp CCT-TS------CSCCEEEEEE---CHHHHHHHGG-----GCCSS-CCCHHHHHHHHHHHTT----HHH---HHHHHHHH
T ss_pred hhh-cc------cccCceeeee---CHHHHHHHHH-----hCCCC-CCCHHHHHHHHHHhcC----HHH---HHHHHHHH
Confidence 788 88 9999998776 5555444332 12344 4677888888888886 233 56677888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.|+.|.+.|++. |+ |. +....|+|.++.+ +.+++..+| .+++|++.+.+
T Consensus 283 ~~~~~~l~~~l~~~--~g-~~-~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~ 334 (367)
T 3euc_A 283 RAERSRVAEGMAAH--GG-VT-VFPSAANFLLARVPDAAQTFDRL-LARKVLIKNVS 334 (367)
T ss_dssp HHHHHHHHHHHHTS--TT-CE-ECCCSSSEEEEECSCHHHHHHHH-HTTTEECEECG
T ss_pred HHHHHHHHHHHHhC--CC-cE-ECCCCCeEEEEECCCHHHHHHHH-HHCCeEEEECC
Confidence 88899999999875 33 66 4456788888777 688888867 67899987643
No 71
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=98.01 E-value=6.2e-06 Score=66.32 Aligned_cols=112 Identities=19% Similarity=0.095 Sum_probs=76.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|.+.+ +++.++.+. ........++|..++..+...|.... +.+.++.+++++
T Consensus 221 sK~~~~------~G~r~G~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~ 283 (381)
T 1v2d_A 221 GKRLEA------TGYRVGWIVG---PKEFMPRLA----GMRQWTSFSAPTPLQAGVAEALKLAR----REGFYEALREGY 283 (381)
T ss_dssp HHHTTC------GGGCCEEEEC---CTTTHHHHH----HHHHHHTSSCCHHHHHHHHHHHHHHH----HTTHHHHHHHHH
T ss_pred hhhcCC------cccceEEEEe---CHHHHHHHH----HHHhhcccCCCcHHHHHHHHHHhCcc----cHHHHHHHHHHH
Confidence 799999 9999998765 334444433 22233334555566777767665321 233466778889
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
.+.|+.|.+.|++.+ |..+..+.|+|.++.+++.++.+ +.++++|++.+
T Consensus 284 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~-~l~~~gi~v~~ 332 (381)
T 1v2d_A 284 RRRRDLLAGGLRAMG----LRVYVPEGTYFLMAELPGWDAFR-LVEEARVALIP 332 (381)
T ss_dssp HHHHHHHHHHHHHTT----CCEECCSBSSEEEEECTTCCHHH-HHHHTCEECEE
T ss_pred HHHHHHHHHHHHHCC----CEecCCCcceEEEEecChHhHHH-HHHhCCEEEec
Confidence 998999999998854 77777788999887664323666 55789999875
No 72
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.00 E-value=5.6e-05 Score=63.24 Aligned_cols=110 Identities=12% Similarity=0.120 Sum_probs=76.2
Q ss_pred cccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 14 VGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQ 93 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~ 93 (142)
-|.|+|.+.+ +++.++.+. ........++|..++.++...|.+. .|.+.++.+++++...|+.|.+.|+
T Consensus 293 ~GlriG~v~~---~~~l~~~l~----~~~~~~~~~~~~~~q~a~~~~L~~~----~~~~~~~~~~~~~~~~~~~l~~~L~ 361 (448)
T 3aow_A 293 PGFRIGWMVG---DPGIIRKME----IAKQSTDLCTNVFGQVVAWRYVDGG----YLEKHIPEIRKFYKPRRDAMLEALE 361 (448)
T ss_dssp GGGCCEEEEE---CHHHHHHHH----HHHHHHHSSCCHHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccEEEEEe---CHHHHHHHH----HHHHHhcCCCCHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789998765 355554443 3333333345668888888888764 4667788889999998999999998
Q ss_pred hcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeCC
Q psy16706 94 KEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 94 ~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.- |+.+..+..+.|||.++.+ +.+++..+|.++ +|.+.+.
T Consensus 362 ~~~-~~g~~~~~p~~g~~~~v~~~~~~~~~~l~~~l~~~-gV~v~pg 406 (448)
T 3aow_A 362 EFM-PEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKK-GVAYVPG 406 (448)
T ss_dssp HHC-CTTCEECCCSBSSEEEEECSTTCCHHHHHHHHHHT-TEECEEG
T ss_pred HhC-CCCeEEeCCCccEEEEEEcCCCCCHHHHHHHHHHC-CcEEEcc
Confidence 752 2126666667899988754 567777768655 9998763
No 73
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=97.97 E-value=9.7e-06 Score=64.43 Aligned_cols=109 Identities=16% Similarity=0.243 Sum_probs=73.8
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ +++.++.+... +..| +++..++.++...|.+.+ .|.++++.+.
T Consensus 196 sK~~~~------~G~r~G~~~~---~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~l~~~~---~~~~~~~~~~--- 254 (350)
T 3fkd_A 196 SHAYGI------PGLRIGYIVA---NKDFMKRVAAF-----STPW-AVNALAIEAAKFILIHPA---QFTLPIRKWQ--- 254 (350)
T ss_dssp HHHHSC------GGGCCEEEEC---CHHHHHHHHTT-----CCTT-CSCHHHHHHHHHHHHCTT---TTCCCHHHHH---
T ss_pred chhccC------cchheEeEEe---CHHHHHHHHHh-----CCCC-CCCHHHHHHHHHHHhCHH---HHHHHHHHHH---
Confidence 799999 9999998876 66666555432 2334 567788888888888754 3444444433
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl---~~~qv~~~L~~~~~Iyl~~~ 136 (142)
..|+.|.+.|++. |+ +..++.+ |+|.++.+ +++++..+|.++++|++.+.
T Consensus 255 -~~~~~l~~~L~~~--~~-~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g 307 (350)
T 3fkd_A 255 -RNTVDFITALNRL--DG-VEVHPSG-TTFFLLRLKKGTAAELKKYMLEEYNMLIRDA 307 (350)
T ss_dssp -HHHHHHHHHHHHS--TT-EEECCCS-SSEEEEEESSSCHHHHHHHHHHTTCEECEEC
T ss_pred -HHHHHHHHHHhcC--CC-cEECCCC-CcEEEEECCCCCHHHHHHHHHHHCCEEEEeC
Confidence 5577788888775 22 6655544 55554433 67788777876699999764
No 74
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=97.95 E-value=3.7e-05 Score=60.86 Aligned_cols=110 Identities=16% Similarity=0.182 Sum_probs=75.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .|.|+|.+.+ .+++..+.+.. .+..| +++..++..+...|.++ +.++.+++++
T Consensus 214 sK~~~~------~G~r~g~~~~--~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~l~~~-------~~~~~~~~~~ 272 (361)
T 3ftb_A 214 TKFFAM------PGIRFGYGIT--NNKEIAAKIKA-----KQNPW-NINCFAEMAAINCLKDT-------NYIEESLLWI 272 (361)
T ss_dssp SSTTSC------GGGCCEEEEE--SCHHHHHHHHT-----TSCTT-CSCHHHHHHHHHTSSCH-------HHHHHHHHHH
T ss_pred hhhcCC------CCcceeEEEe--CCHHHHHHHHh-----hCCCC-CCCHHHHHHHHHHhcCH-------HHHHHHHHHH
Confidence 899999 9999998543 56666555443 22344 66778888888999863 3356677888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl---~~~qv~~~L~~~~~Iyl~~~ 136 (142)
...|+.|.+.|++.. + +..+....|.|..+.+ +.+++..+|.+ ++|++.+.
T Consensus 273 ~~~~~~l~~~l~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~g 326 (361)
T 3ftb_A 273 KKERKRFIEELNKIG--F-IKRVFSPHANFVLCRLENISGEKLYDSLLK-EDIVIRRC 326 (361)
T ss_dssp HHHHHHHHHHHHHSS--S-EEEEECCSSSEEEEEESSSCHHHHHHHHHT-TTEECEEC
T ss_pred HHHHHHHHHHHHhCC--C-CceecCCCCeEEEEEcCCCCHHHHHHHHHH-CCeEEeeC
Confidence 888999999898752 2 5523344566655543 67788776855 59998763
No 75
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=97.94 E-value=6.2e-05 Score=60.81 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=74.4
Q ss_pred ccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q psy16706 15 GERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWL-TEVKGMADRIISMRQSLKDNLQ 93 (142)
Q Consensus 15 geRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~-~El~~m~~ri~~~R~~L~~~l~ 93 (142)
|.|+|++.+ +++..+.+. ........++|..++.++...|.+. .|. +.++.++++++..|+.|.+.|+
T Consensus 252 G~r~G~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~l~~~L~ 320 (407)
T 2zc0_A 252 GFRIGWIIA---EGEILKKVL----MQKQPIDFCAPAISQYIALEYLKRG----YFEKYHLEGALLGYKEKRDIMLKALE 320 (407)
T ss_dssp TSCCEEEEC---CHHHHHHHH----HHHTTTTSSSCHHHHHHHHHHHHTT----HHHHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEec---CHHHHHHHH----HHHHhhcCCCCHHHHHHHHHHHHcC----CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 779998764 355544443 3333322334667788888888764 244 5577788888988888888887
Q ss_pred hcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeCC
Q psy16706 94 KEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 94 ~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.. |+ |..+..+.|+|..+.+ +.+++..+|.++++|++.+.
T Consensus 321 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g 365 (407)
T 2zc0_A 321 NHL-PN-AEFTKPIAGMFVMFFLPEGADGISFANELMEREGVVVVPG 365 (407)
T ss_dssp HHC-TT-SCBCCCSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCS
T ss_pred HhC-CC-CEEecCCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECc
Confidence 752 22 6666667898887644 56778777877779999764
No 76
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=97.89 E-value=0.00017 Score=58.32 Aligned_cols=108 Identities=16% Similarity=0.193 Sum_probs=73.0
Q ss_pred cccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 14 VGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQ 93 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~ 93 (142)
-|.|+|.+.+ +++..+.+. ........++|..++..+...|.+. .| +.++.+++++.+.|+.|.+.|+
T Consensus 242 ~G~r~G~~~~---~~~~~~~l~----~~~~~~~~~~~~~~~~a~~~~l~~~----~~-~~~~~~~~~~~~~~~~l~~~L~ 309 (397)
T 2zyj_A 242 PGLRVAFAVA---HPEALQKLV----QAKQGADLHTPMLNQMLVHELLKEG----FS-ERLERVRRVYREKAQAMLHALD 309 (397)
T ss_dssp GGGCCEEEEC---CHHHHHHHH----HHHHHHHSSCCHHHHHHHHHHHTTT----HH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeEEEec---CHHHHHHHH----HHHHhhcCCCCHHHHHHHHHHHHhC----CH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3789998764 355444443 3333332334667788888888864 35 6677888899998999989888
Q ss_pred hcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeC
Q psy16706 94 KEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 94 ~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~ 135 (142)
+.- |+.+..+..+.|+|.++.+ +.+++..+|.++ +|++.+
T Consensus 310 ~~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~ 353 (397)
T 2zyj_A 310 REV-PKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEE-NVAFVP 353 (397)
T ss_dssp HHS-CTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHT-TEEEEE
T ss_pred HHC-CCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHC-CCEEec
Confidence 751 2126666667899987744 577777768554 999875
No 77
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=96.94 E-value=3.8e-06 Score=68.09 Aligned_cols=115 Identities=11% Similarity=0.078 Sum_probs=77.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhh-cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAF-YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~-~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||+ -|.|+|.+.+ ++++.++.+ ....+.. +++++..++..+...|.+. ..| ++.++++
T Consensus 237 sK~~~~------~G~r~G~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~ 298 (392)
T 3b1d_A 237 TKTFNI------AGTKNSYAII--ENPTLCAQF----KHQQLVNNHHEVSSLGYIATETAYRYG---KPW---LVALKAV 298 (392)
Confidence 899999 9999998764 444344433 3333322 4566767777777777752 234 5566778
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----CHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+...|+.|.+.|++. .|+ |..+..+.|||.++-+ +.+++..+|.++++|++.+.
T Consensus 299 ~~~~~~~l~~~l~~~-~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g 357 (392)
T 3b1d_A 299 LEENIQFAVEYFAQE-APR-LKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRG 357 (392)
Confidence 888888888888762 122 7777888899876544 45566665866899998763
No 78
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.74 E-value=5.9e-05 Score=61.89 Aligned_cols=109 Identities=14% Similarity=0.132 Sum_probs=73.3
Q ss_pred cccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 14 VGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQ 93 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~ 93 (142)
-|.|+|.+.+ +++.++.+. ...+....++|..++..+...|.+. .|.+.++.+++++.+.|+.|.+.|+
T Consensus 264 ~G~r~G~~~~---~~~~~~~l~----~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~L~ 332 (425)
T 1vp4_A 264 PGLRIGMVAG---SKEFIRKIV----QAKQSADLCSPAITHRLAARYLERY----DLLEQLKPTIELYRRKRTVMLNALE 332 (425)
T ss_dssp GGGCEEEEEC---CHHHHHHHH----HHHHHHHSSCCHHHHHHHHHHHHHS----CHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEee---CHHHHHHHH----HHhhhhcCCCCHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789998774 355544443 3333332345667788888888753 3556677888899998999999998
Q ss_pred hcCCCC--CCccccccccceeecCC----CHHHHHHHhhhccceeeeC
Q psy16706 94 KEGSNK--PWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 94 ~~~~~~--~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~ 135 (142)
+.. |+ .|..+..+.|+|.++.+ +.+++.++|.++ +|++.+
T Consensus 333 ~~~-~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~ 378 (425)
T 1vp4_A 333 EYF-SDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRK-KVFYVP 378 (425)
T ss_dssp HHS-TTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHH-TEECEE
T ss_pred HhC-CCCCceEEecCCccEEEEEEcCCCCCHHHHHHHHHHC-CCEEEC
Confidence 752 21 27766677899988754 456666658655 999875
No 79
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=97.58 E-value=0.00047 Score=56.61 Aligned_cols=112 Identities=13% Similarity=0.166 Sum_probs=74.8
Q ss_pred cccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 14 VGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQ 93 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~ 93 (142)
-|.|+|.+.+ + ++.++ .+....+....++|..++..+...|.+.. ...|.+.++.+++++++.|+.|.+.|+
T Consensus 267 ~GlRiG~~~~--~-~~l~~----~l~~~~~~~~~~~~~~~q~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~ 338 (425)
T 2r2n_A 267 SGLRIGFLTG--P-KPLIE----RVILHIQVSTLHPSTFNQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAAD 338 (425)
T ss_dssp STTCCEEEEE--E-HHHHH----HHHHHHHTTTCSSCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEec--C-HHHHH----HHHHHHHHhcCCCCHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999864 2 33333 34444444445677788888888887521 234667788899999999999999998
Q ss_pred hcCCCCCCccccccccceeecCC----CHHH-HHHHhhhccceeeeC
Q psy16706 94 KEGSNKPWNHITDQIGMFCYTGL----NATQ-VRRKLIHDRSLKLSN 135 (142)
Q Consensus 94 ~~~~~~~w~~i~~q~GmF~~~gl----~~~q-v~~~L~~~~~Iyl~~ 135 (142)
+.- |+-+.....+.|+|..+.+ +.++ +.+.| .+++|.+.+
T Consensus 339 ~~~-~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~p 383 (425)
T 2r2n_A 339 KWL-TGLAEWHVPAAGMFLWIKVKGINDVKELIEEKA-VKMGVLMLP 383 (425)
T ss_dssp HHC-SSSEEECCCSBSSEEEEEETTCSCCHHHHHTHH-HHTTEECEE
T ss_pred HHC-CCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHH-HHCCcEEec
Confidence 742 2322445568899988754 3344 45536 588999875
No 80
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=97.55 E-value=0.00029 Score=56.25 Aligned_cols=109 Identities=17% Similarity=0.186 Sum_probs=74.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ -|.|+|++.+ .+++.++.+... +..| ++|..++..+...|.+. .| ++.+++++
T Consensus 215 sK~~~~------~G~r~G~~~~--~~~~~~~~l~~~-----~~~~-~~~~~~~~~~~~~l~~~----~~---~~~~~~~~ 273 (364)
T 1lc5_A 215 TKFYAI------PGLRLGYLVN--SDDAAMARMRRQ-----QMPW-SVNALAALAGEVALQDS----AW---QQATWHWL 273 (364)
T ss_dssp TTTTTC------TTTCCEEEEC--CCHHHHHHHHHH-----SCTT-CSCHHHHHHHHHGGGCH----HH---HHHHHHHH
T ss_pred chhhcC------CccceEEEEE--CCHHHHHHHHHh-----CCCC-CCCHHHHHHHHHHHhCc----HH---HHHHHHHH
Confidence 899999 9999998753 356655554432 2345 45667888888888873 23 55677888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~--~~qv~~~L~~~~~Iyl~~~ 136 (142)
+..|+.|.+.|++. |+ +..++ ..|+|..+.++ .+++..+|. +++|++.+.
T Consensus 274 ~~~~~~l~~~L~~~--~~-~~~~~-~~g~~~~~~~~~~~~~l~~~l~-~~gi~v~~g 325 (364)
T 1lc5_A 274 REEGARFYQALCQL--PL-LTVYP-GRANYLLLRCEREDIDLQRRLL-TQRILIRSC 325 (364)
T ss_dssp HHHHHHHHHHHHTS--TT-EEECC-CSSSEEEEEESCTTCCHHHHHH-TTTEECEEC
T ss_pred HHHHHHHHHHHhcC--CC-CEECC-CCCeEEEEECCCcHHHHHHHHH-HCCcEEeeC
Confidence 88888888888865 33 66554 55777666553 345655585 569998764
No 81
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=97.32 E-value=0.0024 Score=50.56 Aligned_cols=82 Identities=10% Similarity=0.129 Sum_probs=55.1
Q ss_pred hhcCCCCchHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc---ccceeec----
Q psy16706 44 AFYSSPPIHGARIVQEILGDPKLKSQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMFCYT---- 114 (142)
Q Consensus 44 ~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~E--l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q---~GmF~~~---- 114 (142)
....+||..++..+...|. .+.++ ++.+.+++++.++.|.+.|++.+ +..+..+ .|.|..+
T Consensus 253 ~~~~~~~~~~~~a~~~~l~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~ 322 (386)
T 2dr1_A 253 STPSTPPMPQVFGINVALR------IIEKMGGKEKWLEMYEKRAKMVREGVREIG----LDILAEPGHESPTITAVLTPP 322 (386)
T ss_dssp SCSSCCCHHHHHHHHHHHH------HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCTTCBCSSEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHHHH------HHHHhcCHHHHHHHHHHHHHHHHHHHHHcC----CeeCcCccccCCceEEEEcCC
Confidence 3445677677766666664 24444 77888999999999999998864 4444432 3555443
Q ss_pred CCCHHHHHHHhhhccceeeeCC
Q psy16706 115 GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 115 gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.+.+++..+|.++ +|++.+.
T Consensus 323 ~~~~~~~~~~l~~~-gi~v~~~ 343 (386)
T 2dr1_A 323 GIKGDEVYEAMRKR-GFELAKG 343 (386)
T ss_dssp TCCHHHHHHHHHHT-TEECEEC
T ss_pred CCCHHHHHHHHHHC-CeEEecC
Confidence 45788888778655 9998753
No 82
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=97.27 E-value=0.0016 Score=51.88 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=53.6
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---ccc-ceee-c--CCC
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIG-MFCY-T--GLN 117 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~E-l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~---q~G-mF~~-~--gl~ 117 (142)
+++||..++..+...|. .+.++ ++.+.+++.+.|+.|.+.|++.+ +..+.. +.| ++.+ + |++
T Consensus 258 ~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 2huf_A 258 HHTISSTLLYGLREAIA------MACEEGLPALIARHEDCAKRLYRGLQDAG----FELYADPKDRLSTVTTIKVPQGVD 327 (393)
T ss_dssp SCCCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCTTEEEEECCTTCC
T ss_pred CCCCCHHHHHHHHHHHH------HHHHhCHHHHHHHHHHHHHHHHHHHHHcC----CeeccCccccCCcEEEEEcCCCCC
Confidence 34667666665555553 12222 77888999999999999998864 444443 235 4433 2 567
Q ss_pred HHHHHHHhhhccceeeeCC
Q psy16706 118 ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 118 ~~qv~~~L~~~~~Iyl~~~ 136 (142)
.+++..+|.++++|++.+.
T Consensus 328 ~~~~~~~L~~~~gi~v~~g 346 (393)
T 2huf_A 328 WLKAAQYAMKTYLVEISGG 346 (393)
T ss_dssp HHHHHHHHHHHHCEECBCC
T ss_pred HHHHHHHHHHhCCEEEecC
Confidence 8888877877789998753
No 83
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.09 E-value=0.0071 Score=47.16 Aligned_cols=80 Identities=13% Similarity=0.096 Sum_probs=51.8
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc-ccceeec----CCCHHH
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ-IGMFCYT----GLNATQ 120 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q-~GmF~~~----gl~~~q 120 (142)
..+++..+...+...|.. +.++++.+.+++++.|+.|.+.|++.+ +..+..+ .|+|..+ +++.++
T Consensus 228 ~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T 1iug_A 228 AWTPAINLVLAVAAVLEE------VLPRLEEHLALKAWQNALLYGVGEEGG----LRPVPKRFSPAVAAFYLPEGVPYAR 297 (352)
T ss_dssp SSCCCHHHHHHHHHHHHH------HGGGHHHHHHHHHHHHHHHHHHHHHTT----CEESCSSBCTTCEEEECCTTCCHHH
T ss_pred CCCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHCC----CcccccccCCeEEEEEcCCCCCHHH
Confidence 345565555555555531 222377888999999999999998763 5555443 4544333 567888
Q ss_pred HHHHhhhccceeeeCC
Q psy16706 121 VRRKLIHDRSLKLSNV 136 (142)
Q Consensus 121 v~~~L~~~~~Iyl~~~ 136 (142)
+.++|. +.+|++.+.
T Consensus 298 ~~~~l~-~~gi~v~~~ 312 (352)
T 1iug_A 298 VKEAFA-QRGAVIAGG 312 (352)
T ss_dssp HHHHHH-TTTEECEEC
T ss_pred HHHHHH-HCCEEEEeC
Confidence 888785 569998753
No 84
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.02 E-value=0.0044 Score=49.75 Aligned_cols=106 Identities=14% Similarity=0.106 Sum_probs=65.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHH-hhcCCCCchHHH-HHHHHhCChhhHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIR-AFYSSPPIHGAR-IVQEILGDPKLKSQWLTEVKGMAD 79 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R-~~~S~pp~~Ga~-iv~~IL~dp~L~~~W~~El~~m~~ 79 (142)
||.||+ .| |.+.+ +++.++.+.. ..+ ..++.+|...+. .+...|.+ + ++++.+++
T Consensus 242 sK~~~~------~G---G~~~~---~~~~~~~l~~----~~~~~~~~~~~~~~~~a~~~~~l~~------~-~~~~~~~~ 298 (398)
T 3a2b_A 242 SKSLAS------LG---GFVAG---DADVIDFLKH----NARSVMFSASMTPASVASTLKALEI------I-QNEPEHIE 298 (398)
T ss_dssp SSTTCS------SC---EEEEE---CHHHHHHHHH----HCHHHHSSBCCCHHHHHHHHHHHHH------H-HHCTHHHH
T ss_pred cccccC------CC---cEEEe---CHHHHHHHHH----hcccceecCCCCHHHHHHHHHHHHH------H-hhCHHHHH
Confidence 788888 77 65432 4555444433 222 234444444333 33455542 1 34667888
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----HHHHHHHhhhccceeeeCC
Q psy16706 80 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 80 ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~----~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.+.|+.|.+.|++.+ |..++.+ |+|..+-++ .+++..+|.++ +|++.+.
T Consensus 299 ~~~~~~~~l~~~L~~~g----~~~~~~~-g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~ 353 (398)
T 3a2b_A 299 KLWKNTDYAKAQLLDHG----FDLGATE-SPILPIFIRSNEKTFWVTKMLQDD-GVFVNPV 353 (398)
T ss_dssp HHHHHHHHHHHHHHHTT----CCBCSCC-SSEEEEECCCHHHHHHHHHHHHHT-TEECEEE
T ss_pred HHHHHHHHHHHHHHhcC----CCcCCCC-CCEEEEEcCCHHHHHHHHHHHHHC-CcEEEee
Confidence 99999999999998874 5555444 777776553 56677668655 9998764
No 85
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=97.01 E-value=0.015 Score=45.69 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=51.7
Q ss_pred CCCchHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----ccceeec---CCCHH
Q psy16706 48 SPPIHGARIVQEILGDPKLKSQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCYT---GLNAT 119 (142)
Q Consensus 48 ~pp~~Ga~iv~~IL~dp~L~~~W~~E-l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q----~GmF~~~---gl~~~ 119 (142)
+|+..++..+...+. ...++ ++.+.+++++.|+.|.+.|++.+ +..+..+ .|+|..+ +.+.+
T Consensus 243 ~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (384)
T 3zrp_A 243 TPPVHVILQLAEAFR------LIEKEGIENRIKRHTMVASAIRAGLEALG----LEIVARRPESYSNTVTGVILKVADPQ 312 (384)
T ss_dssp CCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSCSSGGGBCSSEEEEECSSSCHH
T ss_pred CCCHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHHHHHHHHCC----CeEccCcccccCccEEEEECCCCCHH
Confidence 666655554444432 12223 77889999999999999998874 5555544 4555333 45788
Q ss_pred HHHHHhhhccceeeeCCC
Q psy16706 120 QVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 120 qv~~~L~~~~~Iyl~~~G 137 (142)
++.++|. +++|.+.+..
T Consensus 313 ~~~~~l~-~~gi~v~~g~ 329 (384)
T 3zrp_A 313 KVLAGTV-NEGVEFAPGV 329 (384)
T ss_dssp HHHHHHH-TTTCCCEECC
T ss_pred HHHHHHH-HCCEEEecCC
Confidence 8888785 5599988654
No 86
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=96.99 E-value=0.003 Score=50.82 Aligned_cols=111 Identities=20% Similarity=0.149 Sum_probs=62.6
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||+ .| |.+. + +++..+.+... ..-.+...+.|| .++..+...|.. ...| .++.+++++
T Consensus 247 sK~~~~------~G---G~~~--~-~~~~~~~l~~~-~~~~~~~~~~~~-~~~~a~~~al~~---~~~~--~~~~~~~~~ 307 (401)
T 2bwn_A 247 AKAYGV------FG---GYIA--A-SARMVDAVRSY-APGFIFSTSLPP-AIAAGAQASIAF---LKTA--EGQKLRDAQ 307 (401)
T ss_dssp SSTTCS------CC---EEEE--E-CHHHHHHHHHH-CHHHHTSBCCCH-HHHHHHHHHHHH---HTSH--HHHHHHHHH
T ss_pred hhhccC------CC---CEEe--c-CHHHHHHHHHh-CcCceecCCCCH-HHHHHHHHHHHH---HHhc--ccHHHHHHH
Confidence 788888 66 5433 2 45555443321 111122223444 555444444421 1111 236778888
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeec-C--CCHHHHHHHhhhccceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-G--LNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~-g--l~~~qv~~~L~~~~~Iyl~~ 135 (142)
...++.|.+.|++.+ +..+..+.||+++. + .+++++.++|.++++|++.+
T Consensus 308 ~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~ 360 (401)
T 2bwn_A 308 QMHAKVLKMRLKALG----MPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQP 360 (401)
T ss_dssp HHHHHHHHHHHHHHT----CCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCE
T ss_pred HHHHHHHHHHHHHCC----CcccCCCCCeEEEEeCChHHHHHHHHHHHhcCCEEEee
Confidence 888888889898764 55566666665543 2 24567776686688999853
No 87
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=96.95 E-value=0.0041 Score=49.67 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=52.2
Q ss_pred CCCchHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc---cceee----cCCCHH
Q psy16706 48 SPPIHGARIVQEILGDPKLKSQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI---GMFCY----TGLNAT 119 (142)
Q Consensus 48 ~pp~~Ga~iv~~IL~dp~L~~~W~~E-l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~---GmF~~----~gl~~~ 119 (142)
+++..++..+...|.. +.++ ++.+++++++.|+.|.+.|++.+ +..+..+. +.|.. .+.+.+
T Consensus 272 ~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
T 1vjo_A 272 TAPINLYYALREALRL------IAQEGLANCWQRHQKNVEYLWERLEDIG----LSLHVEKEYRLPTLTTVCIPDGVDGK 341 (393)
T ss_dssp CCCHHHHHHHHHHHHH------HHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCTTCCHH
T ss_pred CCCHHHHHHHHHHHHH------HHHccHHHHHHHHHHHHHHHHHHHHHcC----CcccCCccccCCcEEEEEcCCCCCHH
Confidence 6666666666665542 2222 67888899999999999998864 55444332 22222 256788
Q ss_pred HHHHHhhhccceeeeCC
Q psy16706 120 QVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 120 qv~~~L~~~~~Iyl~~~ 136 (142)
++..+|.++++|++.+.
T Consensus 342 ~~~~~l~~~~gi~v~~g 358 (393)
T 1vjo_A 342 AVARRLLNEHNIEVGGG 358 (393)
T ss_dssp HHHHHHHHHHCEECEEC
T ss_pred HHHHHHHhhCCEEEecC
Confidence 88887877779998753
No 88
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=96.91 E-value=0.0019 Score=56.02 Aligned_cols=57 Identities=12% Similarity=0.126 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--------------------H-HHHHHHhhhcccee
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------------------A-TQVRRKLIHDRSLK 132 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~--------------------~-~qv~~~L~~~~~Iy 132 (142)
++.+++.+++.|..+.+.|. . .|...+.+.|||.++.+. + +.+.+ +.++++|.
T Consensus 409 ~~~~r~~~~~r~~~l~~~L~-~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~-ll~~~gV~ 482 (546)
T 2zy4_A 409 KHTLKQLIRRRETTLYRELG-M----PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFR-IADETGIV 482 (546)
T ss_dssp HHHHHHHHHHHHHHHHGGGT-S----SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHH-HHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHhcC-C----CcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHH-HHHHCCEE
Confidence 34556677776776777763 2 255567789999766442 2 33555 55889999
Q ss_pred eeCC
Q psy16706 133 LSNV 136 (142)
Q Consensus 133 l~~~ 136 (142)
+.|.
T Consensus 483 v~pG 486 (546)
T 2zy4_A 483 LLPG 486 (546)
T ss_dssp CEES
T ss_pred EeCc
Confidence 9874
No 89
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=96.81 E-value=0.001 Score=52.84 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc---cccccceeec---CCCHHHHHHHhhhccceeeeCCC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCYT---GLNATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i---~~q~GmF~~~---gl~~~qv~~~L~~~~~Iyl~~~G 137 (142)
++.+.+++++.|+.|.+.|++. ++ +..+ ..+.|||++. +.+.+++.++| .+++|++.+.+
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~ 360 (390)
T 1elu_A 295 AEERYQAICQRSEFLWRGLNQL--PH-VHCLATSAPQAGLVSFTVDSPLGHRAIVQKL-EEQRIYLRTIA 360 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS--TT-EEESCSSCCSSSEEEEEECSSSCHHHHHHHH-HHTTEECEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--CC-cEEecCccccccEEEEEcCCCCCHHHHHHHH-HHCCEEEEecC
Confidence 7788889999999999999875 22 6655 3467777653 45778887778 57899997643
No 90
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=96.80 E-value=0.023 Score=45.76 Aligned_cols=81 Identities=14% Similarity=0.114 Sum_probs=53.0
Q ss_pred hcCCCCchHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--c--cccceeec----
Q psy16706 45 FYSSPPIHGARIVQEILGDPKLKSQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--D--QIGMFCYT---- 114 (142)
Q Consensus 45 ~~S~pp~~Ga~iv~~IL~dp~L~~~W~~E--l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~--~--q~GmF~~~---- 114 (142)
.+++||..++..+...|. ...++ ++.+.+++.+.|+.|.+.|++. |+ +..+. . +.|+|..+
T Consensus 271 ~~~t~~~~~~~a~~~al~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~ 341 (398)
T 2fyf_A 271 TYNTPAIATLALLAEQID------WLVGNGGLDWAVKRTADSSQRLYSWAQER--PY-TTPFVTDPGLRSQVVGTIDFVD 341 (398)
T ss_dssp CSSCCCHHHHHHHHHHHH------HHHHHTSHHHHHHHHHHHHHHHHHHHHHS--TT-EEESCCSGGGBCSSEEEEEECT
T ss_pred CCCCCCHHHHHHHHHHHH------HHHHccCHHHHHHHHHHHHHHHHHHHHHc--CC-ceeccCChhhcCCcEEEEECCC
Confidence 456677666555555543 12334 7888999999999999999876 22 55552 2 46745443
Q ss_pred CCCHHHHHHHhhhccceeeeC
Q psy16706 115 GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 115 gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
|++.+++.++|.+ .+|.+.+
T Consensus 342 ~~~~~~l~~~L~~-~gI~v~~ 361 (398)
T 2fyf_A 342 DVDAGTVAKILRA-NGIVDTE 361 (398)
T ss_dssp TSCHHHHHHHHHH-TTCBCCS
T ss_pred CCCHHHHHHHHHH-CCcEEec
Confidence 4577888877855 4998864
No 91
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=96.60 E-value=0.021 Score=45.54 Aligned_cols=107 Identities=16% Similarity=0.194 Sum_probs=63.0
Q ss_pred cccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 14 VGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQ 93 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~ 93 (142)
.|-|.|++. +++++..+.+..... -...++|+..++..+...|.. +. .+.++.+.+++...++.|.+.|+
T Consensus 229 ~g~~~G~~~--~~~~~~~~~l~~~~~---~~~~~~~~~~~~~a~~~al~~--~~---~~~~~~~~~~~~~~~~~l~~~L~ 298 (407)
T 2dkj_A 229 RGPRGGLIL--SNDPELGKRIDKLIF---PGIQGGPLEHVIAGKAVAFFE--AL---QPEFKEYSRLVVENAKRLAEELA 298 (407)
T ss_dssp CCCSCEEEE--ESCHHHHHHHHHHHT---TTTCSSCCHHHHHHHHHHHHH--HH---SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEE--ECCHHHHHHHHhhhc---ccccCCCcHHHHHHHHHHHHH--HH---HhhHHHHHHHHHHHHHHHHHHHH
Confidence 677877654 455666655443211 122334444333233333331 11 23456778888888999999998
Q ss_pred hcCCCCCCcccc-ccccceeecC-----CCHHHHHHHhhhccceeeeC
Q psy16706 94 KEGSNKPWNHIT-DQIGMFCYTG-----LNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 94 ~~~~~~~w~~i~-~q~GmF~~~g-----l~~~qv~~~L~~~~~Iyl~~ 135 (142)
+.+ +..+. ...|+|..+- .+.+++..+| .+++|++.+
T Consensus 299 ~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~ 341 (407)
T 2dkj_A 299 RRG----YRIVTGGTDNHLFLVDLRPKGLTGKEAEERL-DAVGITVNK 341 (407)
T ss_dssp HTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECEE
T ss_pred hCC----ceeecCCCCceEEEEECcccCCCHHHHHHHH-HHcCceecC
Confidence 864 55553 2456666653 3677888767 678999875
No 92
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=96.54 E-value=0.015 Score=45.93 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc----ccccceeec----CCCHHHHHHHhhhccceeeeCC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIGMFCYT----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~----~q~GmF~~~----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.+.+++.+.|+.|.+.|++.+ +..+. ...|++... +.+.+++..+|.++++|++.+.
T Consensus 285 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 351 (393)
T 3kgw_A 285 LENCWRRHREATAHLHKHLQEMG----LKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGG 351 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCC
Confidence 77889999999999999998874 44442 233444332 4578888887977779998863
No 93
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=96.42 E-value=0.044 Score=42.40 Aligned_cols=77 Identities=17% Similarity=0.243 Sum_probs=49.4
Q ss_pred CCCchHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc--cccee-e-c--CCCHHH
Q psy16706 48 SPPIHGARIVQEILGDPKLKSQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ--IGMFC-Y-T--GLNATQ 120 (142)
Q Consensus 48 ~pp~~Ga~iv~~IL~dp~L~~~W~~E-l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q--~GmF~-~-~--gl~~~q 120 (142)
+|+..++..+...|. .+.++ ++.+.+++++.|+.|.+.|++.+ +..+... .|++. + + +.+.++
T Consensus 232 ~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (353)
T 2yrr_A 232 TTPVLLHYALLEALD------LVLEEGVAARERRAREVYAWVLEELKARG----FRPYPKASPLPTVLVVRPPEGVDADR 301 (353)
T ss_dssp CCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CEESCSSSBCTTEEEEECCTTCCHHH
T ss_pred CCCHHHHHHHHHHHH------HHHHhhHHHHHHHHHHHHHHHHHHHHHCC----CccccCccCCCeEEEEECCCCCCHHH
Confidence 555555444444432 23344 77889999999999999998763 5545432 44432 2 2 467888
Q ss_pred HHHHhhhccceeeeC
Q psy16706 121 VRRKLIHDRSLKLSN 135 (142)
Q Consensus 121 v~~~L~~~~~Iyl~~ 135 (142)
+.++|. +.+|++.+
T Consensus 302 ~~~~l~-~~gi~v~~ 315 (353)
T 2yrr_A 302 LVRALY-AEGVAVAG 315 (353)
T ss_dssp HHHHHH-HTTEECEE
T ss_pred HHHHHH-HCCEEEeC
Confidence 888785 55999874
No 94
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=96.41 E-value=0.021 Score=45.68 Aligned_cols=108 Identities=13% Similarity=0.112 Sum_probs=62.9
Q ss_pred Cccc-ccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNY-GIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnf-gL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.| |+ .| |.+.+ +++.++.+...... ...++ +++..++..+...|.. .++.+.+.++
T Consensus 246 sK~~~~~------~g---G~~~~---~~~~~~~l~~~~~~-~~~~~-~~~~~~~~a~~~~l~~-------~~~~~~~~~~ 304 (401)
T 1fc4_A 246 GKALGGA------SG---GYTAA---RKEVVEWLRQRSRP-YLFSN-SLAPAIVAASIKVLEM-------VEAGSELRDR 304 (401)
T ss_dssp SSTTCSS------SC---EEEEE---CHHHHHHHHHHCHH-HHHSC-CCCHHHHHHHHHHHHH-------HHTCHHHHHH
T ss_pred hhhccCC------CC---EEEEc---CHHHHHHHHHhCcC-ceeCC-CCCHHHHHHHHHHHHH-------HhcCHHHHHH
Confidence 7888 77 65 54433 55655555432111 11122 4444555555555532 2224667888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.+.|+.|.+.|++.+ +..++ ..|.|..+-+ +.+++..+|. +++|++.+.
T Consensus 305 ~~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~ 358 (401)
T 1fc4_A 305 LWANARQFREQMSAAG----FTLAG-ADHAIIPVMLGDAVVAQKFARELQ-KEGIYVTGF 358 (401)
T ss_dssp HHHHHHHHHHHHHHTT----CCBCC-SSSSEEEEEEECHHHHHHHHHHHH-HTTEECCEE
T ss_pred HHHHHHHHHHHHHHcC----CcccC-CCCCEEEEEcCChHHHHHHHHHHH-HCCcEEeee
Confidence 8888999999998874 55554 4566655544 3566766685 559988653
No 95
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=96.40 E-value=0.023 Score=45.07 Aligned_cols=58 Identities=14% Similarity=0.214 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeC
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~ 135 (142)
+.++.+++++.+.|+.|.+.|++.+ |..++.+.+|+.+ -+ +.+++..+|.+ ++|++.+
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~-~gi~v~~ 356 (399)
T 3tqx_A 295 TEGPQLRKQLQENSRYFRAGMEKLG----FQLVPGNHPIIPV-MLGDAQLATNMADHLLQ-EGIYVVG 356 (399)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSSSEEEE-EEECHHHHHHHHHHHHH-TTEECCE
T ss_pred hccHHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEE-EeCCHHHHHHHHHHHHH-CCCEEee
Confidence 4577889999999999999999885 6666555555543 23 45677776854 7999873
No 96
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=96.36 E-value=0.055 Score=43.25 Aligned_cols=107 Identities=19% Similarity=0.199 Sum_probs=60.7
Q ss_pred cccccceeEEEeCCHHHHHHHHHHHHHHHHh-hcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 14 VGERVGAFSIVSADKDEAARILSQLKILIRA-FYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNL 92 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~~v~sql~~~~R~-~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l 92 (142)
.|-|.|. +++++++..+.+.. .... ..++|+...+..+.. .+...+.++++.+.+++..+++.|.+.|
T Consensus 230 ~g~~~G~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~aa~~~-----a~~~~~~~~~~~~~~~~~~~~~~l~~~L 298 (417)
T 3n0l_A 230 RGPRGGI--IMTNDEELAKKINS----AIFPGIQGGPLMHVIAAKAV-----GFKFNLSDEWKVYAKQVRTNAQVLANVL 298 (417)
T ss_dssp CSCSCEE--EEESCHHHHHHHHH----HHTTTTCSSCCHHHHHHHHH-----HHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeE--EEECCHHHHHHHhh----hhCCcccCCcHHHHHHHHHH-----HHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 5667554 34566666555433 2222 223444333222221 2223344567788889998899999999
Q ss_pred HhcCCCCCCccccc-cccceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 93 QKEGSNKPWNHITD-QIGMFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 93 ~~~~~~~~w~~i~~-q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.+ |..+.. ..+.|..+ |++.+++.+.| ++++|++.+.
T Consensus 299 ~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~ 343 (417)
T 3n0l_A 299 MDRK----FKLVSDGTDNHLVLMSFLDREFSGKDADLAL-GNAGITANKN 343 (417)
T ss_dssp HHTT----CEEGGGSCSSSEEEEECTTSSSCHHHHHHHH-HHTTEECEEC
T ss_pred HhCC----ceeccCCCCceEEEEEcccCCCCHHHHHHHH-HHcCeEEecc
Confidence 8754 554441 22333333 45788888855 7899998743
No 97
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=96.25 E-value=0.022 Score=45.26 Aligned_cols=107 Identities=19% Similarity=0.238 Sum_probs=60.7
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhh-cC-CCCchHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAF-YS-SPPIHGARIVQEILGDPKLKSQWLTEVKGMAD 79 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~-~S-~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ 79 (142)
||.||+ -| |.+.+ +++.++.+... .+.. ++ +++..++..+...|.. +.+. .++.+.+
T Consensus 235 sK~~~~------~G---G~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~al~~--~~~~---~~~~~~~ 293 (384)
T 1bs0_A 235 GKGFGV------SG---AAVLC---SSTVADYLLQF----ARHLIYSTSMPPAQAQALRASLAV--IRSD---EGDARRE 293 (384)
T ss_dssp SSTTSS------CC---EEEEE---CHHHHHHHHHH----CHHHHSSBCCCHHHHHHHHHHHHH--HHSH---HHHHHHH
T ss_pred cchhhc------cC---cEEEe---CHHHHHHHHHh----chhhhcCCCCCHHHHHHHHHHHHH--Hhcc---ccHHHHH
Confidence 677777 55 54433 45555554432 1111 22 3555555555544431 1111 3456788
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeC
Q psy16706 80 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 80 ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~ 135 (142)
++.+.|+.|.+.|++.+ +...+. .|.|..+-+ +.+++..+|.+ .+|++.+
T Consensus 294 ~~~~~~~~l~~~L~~~g----~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~ 347 (384)
T 1bs0_A 294 KLAALITRFRAGVQDLP----FTLADS-CSAIQPLIVGDNSRALQLAEKLRQ-QGCWVTA 347 (384)
T ss_dssp HHHHHHHHHHHHHTTSS----CEECSC-CSSBCCEEEESHHHHHHHHHHHHH-TTEECCE
T ss_pred HHHHHHHHHHHHHHhcC----CcccCC-CCCEEEEEeCCHHHHHHHHHHHHH-CCcEEEe
Confidence 88888999999998764 555543 444433333 45677776854 5999865
No 98
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=96.24 E-value=0.029 Score=44.47 Aligned_cols=64 Identities=13% Similarity=0.152 Sum_probs=44.4
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-cc---ccce-ee-c--CCCHHHHHHHhhhccceeeeCC
Q psy16706 69 QWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQ---IGMF-CY-T--GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 69 ~W~~E-l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~-~q---~GmF-~~-~--gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
.|.++ ++.+.+++.+.|+.|.+.|++.+ +..+. .. .|.| .+ + +.+.+++.++|.++++|++.+.
T Consensus 262 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g 334 (392)
T 2z9v_A 262 LYLNEGPEAVWARHALTAKAMRAGVTAMG----LSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSG 334 (392)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEEC
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHcC----CeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecC
Confidence 34555 78889999999999999998763 44443 21 3443 32 2 4678888887877679998753
No 99
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=96.21 E-value=0.069 Score=42.60 Aligned_cols=80 Identities=11% Similarity=0.165 Sum_probs=49.4
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeec-----CCCHH
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNAT 119 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~-q~GmF~~~-----gl~~~ 119 (142)
+++||...+..+...+ .....++++.+.+++.+.++.|.+.|++.+ |..+.. ..+.|..+ +++.+
T Consensus 264 ~~~~~~~~~~a~~~a~-----~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (420)
T 3gbx_A 264 QGGPLMHVIAGKAVAL-----KEAMEPEFKVYQQQVAKNAKAMVEVFLNRG----YKVVSGGTENHLFLLDLVDKNLTGK 334 (420)
T ss_dssp -CCCCHHHHHHHHHHH-----HHTTSHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHH
T ss_pred CCCcchhHHHHHHHHH-----HHHHhHhHHHHHHHHHHHHHHHHHHHHhcC----CeeccCCCCCeEEEEEcCCCCCCHH
Confidence 4566655444333222 111234556778888888888888888754 665552 33444433 45788
Q ss_pred HHHHHhhhccceeeeC
Q psy16706 120 QVRRKLIHDRSLKLSN 135 (142)
Q Consensus 120 qv~~~L~~~~~Iyl~~ 135 (142)
++.+.| ++++|++.+
T Consensus 335 ~~~~~l-~~~gi~v~~ 349 (420)
T 3gbx_A 335 EADAAL-GRANITVNK 349 (420)
T ss_dssp HHHHHH-HHTTEECEE
T ss_pred HHHHHH-HHCCcEecc
Confidence 888856 788999876
No 100
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=96.11 E-value=0.044 Score=43.65 Aligned_cols=63 Identities=19% Similarity=0.237 Sum_probs=45.1
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc---ccceeec----CCCHHHHHHHhhhccceeeeC
Q psy16706 69 QWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMFCYT----GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 69 ~W~~E-l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q---~GmF~~~----gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
.+.++ ++.+.++++.+|+.|.+.|++.+ +..+..+ .+.+... +.+.+++.++|.++++|++.+
T Consensus 282 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~ 352 (411)
T 3nnk_A 282 LILQEGLDYGIARHKLHGDALVKGIQAMG----LETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGT 352 (411)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEE
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHcC----CEeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeC
Confidence 34555 88899999999999999998864 4444322 2444333 567888888788888998864
No 101
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=96.05 E-value=0.0085 Score=47.18 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=52.6
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc------ccceeecCCCHH
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ------IGMFCYTGLNAT 119 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q------~GmF~~~gl~~~ 119 (142)
..+++..++..+...|.+ +.+.++.+.+++.+.|+.|.+.|++.+ +..+... ...|.+.+++.+
T Consensus 236 ~~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (384)
T 1eg5_A 236 SGTQNVPGIVGAARAMEI------AVEELSEAAKHMEKLRSKLVSGLMNLG----AHIITPLEISLPNTLSVSFPNIRGS 305 (384)
T ss_dssp CSCCCHHHHHHHHHHHHH------HHHTHHHHHHHHHHHHHHHHHHHHTTT----CEECSCTTSBCTTEEEEECTTCCHH
T ss_pred CCCCChHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHhCCCC----eEEeCCcccCCCCEEEEEeCCCCHH
Confidence 346666666666666643 344577888899999999999998733 4444321 122333356788
Q ss_pred HHHHHhhhccceeeeCC
Q psy16706 120 QVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 120 qv~~~L~~~~~Iyl~~~ 136 (142)
++.++| .+++|++.+.
T Consensus 306 ~~~~~l-~~~gi~v~~g 321 (384)
T 1eg5_A 306 TLQNLL-SGYGIYVSTS 321 (384)
T ss_dssp HHHHHH-HHTTEECBC-
T ss_pred HHHHHH-hhCCeEEecc
Confidence 888867 6899998763
No 102
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=96.03 E-value=0.0085 Score=47.53 Aligned_cols=58 Identities=10% Similarity=0.175 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccceeec--CCCHHHHHHHhhhccceeeeC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~--q~GmF~~~--gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
++.+.+++.+.++.|.+.|++. |+ +..+.. +.|||++. +.+.+++.++| .+.+|++.+
T Consensus 299 ~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~ 360 (406)
T 1kmj_A 299 LNNIAEYEQNLMHYALSQLESV--PD-LTLYGPQNRLGVIAFNLGKHHAYDVGSFL-DNYGIAVRT 360 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS--TT-EEEESCTTCCSEEEEEETTCCHHHHHHHH-HHTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CC-eEEecCCCcCCEEEEEECCCCHHHHHHHH-hhCCcEEEe
Confidence 5677888888888999999775 22 666665 67777654 45678888756 677998865
No 103
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=96.01 E-value=0.044 Score=43.62 Aligned_cols=58 Identities=17% Similarity=0.357 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeecC-----CCHHHHHHHhhhccceeeeC
Q psy16706 73 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYTG-----LNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 73 El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~-q~GmF~~~g-----l~~~qv~~~L~~~~~Iyl~~ 135 (142)
.++.+.+++.+.|+.|.+.|++.+ +..+.. ..|+|..+- .+.+++.++| .+++|++.+
T Consensus 277 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~ 340 (405)
T 2vi8_A 277 DFKAYAKRVVDNAKRLASALQNEG----FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVL-DEVGITVNK 340 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH-HHHTEECEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCCceEEEEEccCCCCCHHHHHHHH-HHcCceecc
Confidence 456678888888999999998864 555543 346665543 4677888767 678999875
No 104
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=96.00 E-value=0.016 Score=46.21 Aligned_cols=59 Identities=10% Similarity=0.213 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc------ccceeec--CCCHHHHHHHhhhccceeeeCC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ------IGMFCYT--GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q------~GmF~~~--gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.+.+++.+.++.+.+.|++. ++ +..+... .+||++. +.+.+++.+.| .+++|++.+.
T Consensus 303 ~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~ 369 (420)
T 1t3i_A 303 MENIHNYEVELTHYLWQGLGQI--PQ-LRLYGPNPKHGDRAALASFNVAGLHASDVATMV-DQDGIAIRSG 369 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--TT-EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHH-HTTTEECBCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhC--CC-eEEeCCCccccccCCEEEEEECCCCHHHHHHHH-HHCCeEEeec
Confidence 6678888888899999999875 22 5555443 5666553 34677888756 6789998765
No 105
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=95.89 E-value=0.16 Score=40.41 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=51.6
Q ss_pred CCCCchHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc---cceeec----CCCH
Q psy16706 47 SSPPIHGARIVQEILGDPKLKSQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI---GMFCYT----GLNA 118 (142)
Q Consensus 47 S~pp~~Ga~iv~~IL~dp~L~~~W~~E-l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~---GmF~~~----gl~~ 118 (142)
.+++..++..+...+. .+.++ ++.+.+++...|+.|.+.|++.+ +..+..+. |.+... +.+.
T Consensus 266 ~~~~~~~~~a~~~al~------~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (416)
T 3isl_A 266 HTEATTMLYALREGVR------LVLEEGLETRFERHRHHEAALAAGIKAMG----LRLFGDDSCKMPVVTCVEIPGGIDG 335 (416)
T ss_dssp SCCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBCSCGGGBCTTEEEEECCTTCCH
T ss_pred CCCCHHHHHHHHHHHH------HHHHhhHHHHHHHHHHHHHHHHHHHHHcC----CEeccCccccCCcEEEEeCCCCCCH
Confidence 3555554444433332 23444 78899999999999999998854 44444432 444332 5678
Q ss_pred HHHHHHhhhccceeeeC
Q psy16706 119 TQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~ 135 (142)
+++.++|.++++|++.+
T Consensus 336 ~~l~~~L~~~~gi~v~~ 352 (416)
T 3isl_A 336 ESVRDMLLAQFGIEIAS 352 (416)
T ss_dssp HHHHHHHHHHHCEECBC
T ss_pred HHHHHHHHHhCCEEEec
Confidence 88888797778999874
No 106
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=95.84 E-value=0.08 Score=41.68 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccceeec--CCCHHHHHHHhhhccceeeeCC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~--q~GmF~~~--gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.+.+++...|+.|.+.|++.+ +..+.. ..++|... +.+.+++..+|.++++|.+.+.
T Consensus 276 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g 338 (376)
T 3f0h_A 276 ADAEVARIASQAADFRAKIKDLP----FELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPN 338 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSS----EEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecC
Confidence 67888888888999988888764 433332 34455444 6688888887987779998654
No 107
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=95.67 E-value=0.039 Score=43.36 Aligned_cols=81 Identities=12% Similarity=0.014 Sum_probs=51.8
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----ccceee--cCCCHH
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCY--TGLNAT 119 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q----~GmF~~--~gl~~~ 119 (142)
.++|+..++..+...|. .+.++++.+.+++.+.|+.|.+.|++. |+ +..+..+ .+++++ .+.+.+
T Consensus 232 ~~~~~~~~~~~~~~al~------~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (382)
T 4eb5_A 232 SGSENVPSIVGFGKAAE------ITAMEWREEAERLRRLRDRIIDNVLKI--EE-SYLNGHPEKRLPNNVNVRFSYIEGE 302 (382)
T ss_dssp CSCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHTTS--TT-EEECSCSSSBCTTEEEEEETTSCHH
T ss_pred CCCccHHHHHHHHHHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhC--CC-eEEeCCcccCCCCEEEEEeCCcCHH
Confidence 45555555444444442 234457888999999999999999864 22 4444332 345443 356788
Q ss_pred HHHHHhhhccceeeeCC
Q psy16706 120 QVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 120 qv~~~L~~~~~Iyl~~~ 136 (142)
++.++| .+++|++.+.
T Consensus 303 ~~~~~l-~~~gi~v~~g 318 (382)
T 4eb5_A 303 SIVLSL-DMAGIQASTG 318 (382)
T ss_dssp HHHHHH-HHHTCBCBCC
T ss_pred HHHHHH-HHCCEEEecc
Confidence 888878 5789998764
No 108
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=95.56 E-value=0.007 Score=48.90 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=56.4
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||. |.|+|++.+ +++.++.+.. .....+|+.+| .++..+...|.. +. + ..+.+++
T Consensus 267 sK~~~~-------GlriG~~~~---~~~~~~~l~~---~~~~~~~~~~~-~~~~a~~aal~~--~~-----~-~~~~~~~ 324 (426)
T 1sff_A 267 AKSIAG-------GFPLAGVTG---RAEVMDAVAP---GGLGGTYAGNP-IACVAALEVLKV--FE-----Q-ENLLQKA 324 (426)
T ss_dssp CGGGGT-------SSCCEEEEE---EHHHHTTSCT---TSBCCSSSSCH-HHHHHHHHHHHH--HH-----H-TTHHHHH
T ss_pred cccccC-------CCceEEEEE---cHHHHhhhcc---CCcCcCCCCCH-HHHHHHHHHHHH--HH-----h-cCHHHHH
Confidence 677776 789998875 2333333321 01123454444 444444433331 10 0 1234455
Q ss_pred HHHHHHHHHHHHhcC--CCCCCccccccccceeecCC------------CHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGL------------NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~--~~~~w~~i~~q~GmF~~~gl------------~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.++|+.+.+.|++.+ .+. +..+.. .|+|..+-+ +.+++..+|. +++|.+.+.+
T Consensus 325 ~~~~~~l~~~l~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~ 391 (426)
T 1sff_A 325 NDLGQKLKDGLLAIAEKHPE-IGDVRG-LGAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCG 391 (426)
T ss_dssp HHHHHHHHHHHHHHHHTCTT-EEEEEE-ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEES
T ss_pred HHHHHHHHHHHHHHHHhCCC-eEEEEE-EEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCC
Confidence 555555555555432 221 222333 388877655 2456666675 5799998754
No 109
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=95.49 E-value=0.032 Score=43.40 Aligned_cols=56 Identities=16% Similarity=0.065 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeee
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~ 134 (142)
++.+.+++.++|+.|.+.|+..+ |..+....|+|.++.++.+-+++ |.++++|++.
T Consensus 266 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~-l~~~~gi~v~ 321 (359)
T 1svv_A 266 FFELGAHSNKMAAILKAGLEACG----IRLAWPSASNQLFPILENTMIAE-LNNDFDMYTV 321 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CCBSSCCSSSEECBEEEHHHHHH-HTTTEECEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCC----eEEccCCccceEEEEcCHHHHHH-HHHhcCEEEE
Confidence 34577788888888888884322 66666677888888776544444 8777688874
No 110
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=95.44 E-value=0.0042 Score=48.64 Aligned_cols=117 Identities=9% Similarity=-0.058 Sum_probs=58.9
Q ss_pred CcccccccCCCCcccc-cceeEEEeCCHHHHHHHHHHHHHHHHh-hcCCCCchHHHHHHHHhCC-hhhHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGER-VGAFSIVSADKDEAARILSQLKILIRA-FYSSPPIHGARIVQEILGD-PKLKSQWLTEVKGMA 78 (142)
Q Consensus 2 SKnfgL~~~~~~YgeR-vGal~vv~~~~~~~~~v~sql~~~~R~-~~S~pp~~Ga~iv~~IL~d-p~L~~~W~~El~~m~ 78 (142)
||.||. .|.| .|.+. +++++..+. +....+. ...+++..++..+...+.. +...+.+.+..+.+.
T Consensus 144 ~K~~~~------~~~r~~G~~~--~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 211 (331)
T 1pff_A 144 TKYING------HTDVVAGLVC--SRADIIAKV----KSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVA 211 (331)
T ss_dssp TTTTSS------SSSCCCEEEE--ECHHHHHHH----HHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCC------CCCceEEEEE--eCcHHHHHH----HHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 799999 9999 56543 343244333 3333333 2234555555554444442 334445555555555
Q ss_pred HHHHHHH---HHHHHHHHhcCCCCCCcccc----ccccceeecCCCHHHHHHHhhhccceeee
Q psy16706 79 DRIISMR---QSLKDNLQKEGSNKPWNHIT----DQIGMFCYTGLNATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 79 ~ri~~~R---~~L~~~l~~~~~~~~w~~i~----~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~ 134 (142)
+.+++.+ +.+++.|... | .+..+. ...|||++.--+++++.+.| ++++|++.
T Consensus 212 ~~l~~~~~l~~~~~~~l~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gI~~~ 270 (331)
T 1pff_A 212 EFLHEHKAVKKVYYPGLPDH--P-GHEIAKKQMKMFGSMIAFDVDGLEKAKKVL-DNCHVVSL 270 (331)
T ss_dssp HHHHHCTTCCCEECTTSTTS--T-THHHHHHHCSSCCSEEEEECSSHHHHHHHH-HTCSSSEE
T ss_pred HHHHcCCCeeEEECCCCCCC--c-cHHHHHhhCCCCceEEEEEECCHHHHHHHH-HhCCCcee
Confidence 5544311 0011111111 1 133222 24667766544788888844 78999764
No 111
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=95.31 E-value=0.061 Score=42.08 Aligned_cols=86 Identities=14% Similarity=0.182 Sum_probs=51.5
Q ss_pred HhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccc--cc-cccceeecCCC-
Q psy16706 43 RAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPW-NHI--TD-QIGMFCYTGLN- 117 (142)
Q Consensus 43 R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w-~~i--~~-q~GmF~~~gl~- 117 (142)
+..+++||..++..+...|. .+.+. ..++.+.+++++.|+.+.+.|++.+ + + ..+ +. +.|+|..+.++
T Consensus 233 ~~~~~~~~~~~~~~~~~al~--~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 305 (360)
T 1w23_A 233 DSLYNTPPTFSIYMLRNVLD--WIKDL--GGAEAIAKQNEEKAKIIYDTIDESN--G-FYVGHAEKGSRSLMNVTFNLRN 305 (360)
T ss_dssp TTCSSCCCHHHHHHHHHHHH--HHHHT--THHHHHHHHHHHHHHHHHHHHHTTT--T-SSEESSCGGGBCSSEEEEECSS
T ss_pred cCCCCCCCHHHHHHHHHHHH--HHHHh--cCHHHHHHHHHHHHHHHHHHHHHcc--C-cccccCCchhccCcEEEEEcCC
Confidence 34557777776655555553 11111 0256788888998999999998753 2 3 332 22 45766666553
Q ss_pred ---HHHHHHHhhhccceeeeCC
Q psy16706 118 ---ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 118 ---~~qv~~~L~~~~~Iyl~~~ 136 (142)
.+++..+| .+++|.+.+.
T Consensus 306 ~~~~~~~~~~l-~~~gi~~~~~ 326 (360)
T 1w23_A 306 EELNQQFLAKA-KEQGFVGLNG 326 (360)
T ss_dssp HHHHHHHHHHH-HHTTEESCBC
T ss_pred CccHHHHHHHH-HHCCeeeecC
Confidence 34555546 4688887653
No 112
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=95.27 E-value=0.01 Score=47.01 Aligned_cols=104 Identities=14% Similarity=0.225 Sum_probs=61.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||. |.|+|++.+ + ++.++.+.. .....+|+.+| .++.++...|.+. +.+.+++
T Consensus 240 SK~~~~-------g~~~G~~~~--~-~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~l~~~----------~~~~~~~ 295 (375)
T 2eh6_A 240 AKGLGG-------GVPIGAILA--R-EEVAQSFTP---GSHGSTFGGNP-LACRAGTVVVDEV----------EKLLPHV 295 (375)
T ss_dssp CGGGGT-------TSCCEEEEE--E-HHHHTTCCT---TSCCCSSTTCH-HHHHHHHHHHHHH----------HHHHHHH
T ss_pred cccccC-------CCCeEEEEE--c-HHHHhhhcC---CCCCCCCCCCH-HHHHHHHHHHHHH----------HHHHHHH
Confidence 677765 789998775 2 333333222 01234555544 3444444444321 1567777
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHHhhhccceeeeC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl--~~~qv~~~L~~~~~Iyl~~ 135 (142)
+++|+.|.+.|++.+. ..+ ...|+|..+-+ +.+++..+|. +++|.+.+
T Consensus 296 ~~~~~~l~~~L~~~~~----~~~-~~~g~~~~~~~~~~~~~~~~~l~-~~gi~~~~ 345 (375)
T 2eh6_A 296 REVGNYFKEKLKELGK----GKV-KGRGLMLGLELERECKDYVLKAL-EKGLLINC 345 (375)
T ss_dssp HHHHHHHHHHHHHTTS----SEE-EEETTEEEEECSSCCHHHHHHHH-HTTEECEE
T ss_pred HHHHHHHHHHHHHHhc----CCc-eEEEEEEEEEEcCcHHHHHHHHH-HCCCEEec
Confidence 8888888888887642 223 34677777655 3566776685 58998875
No 113
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=95.10 E-value=0.051 Score=43.37 Aligned_cols=66 Identities=14% Similarity=0.115 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccceeec--CCCHHHHHHHhhhccceeeeC
Q psy16706 66 LKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYT--GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 66 L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~---q~GmF~~~--gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
++.+|.+.++.+.++++++|+.|.+.|++. |+ +..+.. +.|++++. +.+.+++..+| .+++|++.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gi~v~~ 363 (406)
T 3cai_A 293 RRERLAVSMQSADAYLNRVFDYLMVSLRSL--PL-VMLIGRPEAQIPVVSFAVHKVPADRVVQRL-ADNGILAIA 363 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--TT-EEECCCCSSBCSEEEEEETTBCHHHHHHHH-HHTTEECEE
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHhcC--CC-eEEcCCccccCCEEEEEECCcCHHHHHHHH-HHCCcEEec
Confidence 346677788999999999999999999874 22 444433 35665543 56788888868 568999874
No 114
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=95.07 E-value=0.41 Score=37.04 Aligned_cols=79 Identities=6% Similarity=0.063 Sum_probs=48.4
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc----cccc-ceeec--CCC
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIG-MFCYT--GLN 117 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~-El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~----~q~G-mF~~~--gl~ 117 (142)
+.+|+..++..+...+. .+.+ .++.+.+++.+.++.+.+.|++.. | +..++ ...+ ++++. + +
T Consensus 241 ~~~~~~~~~~~~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g-~~~~~~~~~~~~~~~~~~~~~~-~ 310 (362)
T 3ffr_A 241 PETPNAMNIFLLGKVTG------DMLQISADGIRKQTEEKAALINTYIESSK--V-FSFGVEDAKLRSMTTIVANTTM-L 310 (362)
T ss_dssp SSCCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHCS--S-EEESSSCGGGBCSSEEEEEESS-C
T ss_pred CCCchHHHHHHHHHHHH------HHHHccHHHHHHHHHHHHHHHHHHHHHcc--C-ceeccCChhhcCCceEEEecCC-C
Confidence 55666665554444443 1112 267888889998999999998761 1 44443 1223 33322 3 6
Q ss_pred HHHHHHHhhhccceeeeC
Q psy16706 118 ATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 118 ~~qv~~~L~~~~~Iyl~~ 135 (142)
++++.++|.++ +|.+.+
T Consensus 311 ~~~~~~~l~~~-gi~~~~ 327 (362)
T 3ffr_A 311 PGEINKILEPF-DMAVGA 327 (362)
T ss_dssp HHHHHHHHGGG-TEEEEE
T ss_pred HHHHHHHHHHC-CeEEec
Confidence 78888878655 998874
No 115
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=94.79 E-value=0.023 Score=45.38 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=60.3
Q ss_pred cccceeEEEeCCHHHHHHHHHHHHHHHHh-hcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16706 16 ERVGAFSIVSADKDEAARILSQLKILIRA-FYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQK 94 (142)
Q Consensus 16 eRvGal~vv~~~~~~~~~v~sql~~~~R~-~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~ 94 (142)
.|+|++.+ +++..+.+ ....+. +| +++..++..+...|.. .++ +.+.+++++.++.|.+.|++
T Consensus 258 ~~~G~~~~---~~~~~~~~----~~~~~~~~~-~~~~~~~~a~~~~l~~-------~~~-~~~~~~~~~~~~~l~~~L~~ 321 (392)
T 3ruy_A 258 FPISCAAA---NRDILGVF----EPGSHGSTF-GGNPLACAVSIAALEV-------LEE-EKLTERSLQLGEKLVGQLKE 321 (392)
T ss_dssp SCCEEEEE---CHHHHTTC----CTTSSCCSS-TTCHHHHHHHHHHHHH-------HHH-TTHHHHHHHHHHHHHHHHTT
T ss_pred hhhEEEEE---CHHHHhhh----ccCCcCCCC-CCCHHHHHHHHHHHHH-------HHh-hhHHHHHHHHHHHHHHHHHH
Confidence 78887654 44443332 222232 34 4444556655555542 111 56778888889999999988
Q ss_pred cCCCCCCccccccccceeecCC--CHHHHHHHhhhccceeeeCCC
Q psy16706 95 EGSNKPWNHITDQIGMFCYTGL--NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 95 ~~~~~~w~~i~~q~GmF~~~gl--~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.+. +.....+.+|+.+. + +.+++..+| .+++|++.+.+
T Consensus 322 ~~~~~-~~~~~~~g~~~~~~-~~~~~~~l~~~l-~~~gi~v~~~~ 363 (392)
T 3ruy_A 322 IDNPM-ITEVRGKGLFIGIE-LNEPARPYCEQL-KAAGLLCKETH 363 (392)
T ss_dssp CCCTT-EEEEEEETTEEEEE-ESSCSHHHHHHH-HTTTEECCCBT
T ss_pred hcCCC-ceEEEeeeeEEEEE-EcchHHHHHHHH-HHCCcEEecCC
Confidence 76432 33333344444433 4 567777768 47899998765
No 116
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=94.77 E-value=0.018 Score=46.94 Aligned_cols=117 Identities=15% Similarity=0.143 Sum_probs=56.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||. |.|+|++.+ +++..+.+........-.+|+.+| .++..+...|.. +. +.+.+.+++
T Consensus 265 sK~l~~-------G~~~G~~~~---~~~~~~~~~~~~~~~~~~t~~~~~-~~~aaa~aal~~--~~-----~~~~~~~~~ 326 (424)
T 2e7u_A 265 GKILGG-------GLPAAAYAG---RREIMEKVAPLGPVYQAGTLSGNP-LAMAAGLATLEL--LE-----ENPGYYAYL 326 (424)
T ss_dssp CGGGGT-------TSSCEEEEE---CHHHHTTBTTTSSBCCCCTTCSCH-HHHHHHHHHHHH--HH-----HCTHHHHHH
T ss_pred hhhhhC-------CcceEEEEE---cHHHHhhhcccCCcccCCCCCCCH-HHHHHHHHHHHH--HH-----hccHHHHHH
Confidence 677776 679998654 334444332100001123555444 334444444431 11 113345555
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----------------HHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----------------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~-----------------~~qv~~~L~~~~~Iyl~~~G 137 (142)
.++++.|.+.|++......+.......|.|..+-+. ..++..+|. +++|++.+.|
T Consensus 327 ~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~ 398 (424)
T 2e7u_A 327 EDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSN 398 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSS
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccC
Confidence 555555555554431000122222345666655442 235666575 6899998765
No 117
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=94.68 E-value=0.07 Score=42.08 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=49.4
Q ss_pred hcCCCCchHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCC-cccc---ccccceeecC---
Q psy16706 45 FYSSPPIHGARIVQEILGDPKLKSQWLT--EVKGMADRIISMRQSLKDNLQKEGSNKPW-NHIT---DQIGMFCYTG--- 115 (142)
Q Consensus 45 ~~S~pp~~Ga~iv~~IL~dp~L~~~W~~--El~~m~~ri~~~R~~L~~~l~~~~~~~~w-~~i~---~q~GmF~~~g--- 115 (142)
...+||..++..+...|.. ..+ .++.+++++.+.|+.|.+.|++.+ .+ .... ...+.+..+-
T Consensus 236 ~~~t~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 306 (362)
T 2c0r_A 236 LYNTPPSFGIYMVNEVLKW------IEERGGLEGVQQANRKKASLIYDAIDQSG---GFYRGCVDVDSRSDMNITFRLAS 306 (362)
T ss_dssp CSSCCCHHHHHHHHHHHHH------HHHTTHHHHHHHHHHHHHHHHHHHHHTST---TSSEESSCGGGBCSSEEEEECSC
T ss_pred cCCCchHHHHHHHHHHHHH------HHHhCCHHHHHHHHHHHHHHHHHHHHHcC---CccccCCChHHcCCcEEEEEcCC
Confidence 3457777776666655541 122 367888999999999999998765 13 2221 1233333332
Q ss_pred -CCHHHHHHHhhhccceeeeC
Q psy16706 116 -LNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 116 -l~~~qv~~~L~~~~~Iyl~~ 135 (142)
.+.+++.++| .+.+|.+.+
T Consensus 307 ~~~~~~~~~~L-~~~gi~~~~ 326 (362)
T 2c0r_A 307 EELEKEFVKAS-EQEGFVGLK 326 (362)
T ss_dssp HHHHHHHHHHH-HHTTEESCB
T ss_pred cchHHHHHHHH-HHCCCeecc
Confidence 2466777767 567886654
No 118
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=94.67 E-value=0.029 Score=44.85 Aligned_cols=112 Identities=12% Similarity=0.054 Sum_probs=62.0
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||. |.|+|++.+ + ++.++.+.. .....+|+ ++..++..+...|.. +. + +.+.+++
T Consensus 253 sK~~~~-------g~~~G~~~~--~-~~~~~~l~~---~~~~~~~~-~~~~~~~a~~~al~~------~~-~-~~~~~~~ 310 (395)
T 1vef_A 253 AKALGG-------GVPLGVAVM--R-EEVARSMPK---GGHGTTFG-GNPLAMAAGVAAIRY------LE-R-TRLWERA 310 (395)
T ss_dssp CGGGGT-------TSSCEEEEE--E-HHHHHTSCT---TSSCCSST-TCHHHHHHHHHHHHH------HH-H-HTTHHHH
T ss_pred cccccC-------CCceEEEEe--h-HHHHhhhcc---CCcCCCcC-CCHHHHHHHHHHHHH------HH-h-CCHHHHH
Confidence 677766 789998765 2 333333221 00112333 333445444444432 11 1 3467788
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl--~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.++|+.|.+.|++.+.+. ... ....|+|..+-+ +.+++.++|.++++|.+.+.|
T Consensus 311 ~~~~~~l~~~l~~~~~~~-~~~-~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~ 366 (395)
T 1vef_A 311 AELGPWFMEKLRAIPSPK-IRE-VRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAG 366 (395)
T ss_dssp HHHHHHHHHHHHTSCCTT-EEE-EEEETTEEEEEESSCSHHHHHHHHHHHCEECEESS
T ss_pred HHHHHHHHHHHHHhhcCc-eEE-EEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecCC
Confidence 888888888888765321 111 234566666544 356677668647899987643
No 119
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=94.61 E-value=0.62 Score=36.41 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=49.4
Q ss_pred CCCCchHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHH-HhcCCCCCCcccc-c----cccceeecCCC-H
Q psy16706 47 SSPPIHGARIVQEILGDPKLKSQWLTE-VKGMADRIISMRQSLKDNL-QKEGSNKPWNHIT-D----QIGMFCYTGLN-A 118 (142)
Q Consensus 47 S~pp~~Ga~iv~~IL~dp~L~~~W~~E-l~~m~~ri~~~R~~L~~~l-~~~~~~~~w~~i~-~----q~GmF~~~gl~-~ 118 (142)
.+++..++..+...|. ...++ ++.+.+++.++|+.|.+.| ++.+ +..+. . ..|.|..+.+. .
T Consensus 257 ~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~ 326 (385)
T 2bkw_A 257 ATPPVQLINSLDVALK------EILEEGLHKRWDLHREMSDWFKDSLVNGLQ----LTSVSRYPSNMSAHGLTAVYVADP 326 (385)
T ss_dssp SCCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHTTTC----CEESSCSSSTTBCSSCEEEECSCH
T ss_pred CCCCHHHHHHHHHHHH------HHHHccHHHHHHHHHHHHHHHHHHHHHhcC----ceecccCcccccCCceEEEecCCH
Confidence 3566555544444442 11223 6778888889999999999 7653 54443 2 34666555553 6
Q ss_pred HHHHHHhhhccceeeeCC
Q psy16706 119 TQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~~ 136 (142)
+++..+| .+++|++.+.
T Consensus 327 ~~~~~~l-~~~gi~v~~g 343 (385)
T 2bkw_A 327 PDVIAFL-KSHGVVIAGG 343 (385)
T ss_dssp HHHHHHH-HHTTEECBCC
T ss_pred HHHHHHH-HHCCeEEeCC
Confidence 7777768 5689998753
No 120
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=94.52 E-value=0.63 Score=36.98 Aligned_cols=58 Identities=24% Similarity=0.364 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeec-----CCCHHHHHHHhhhccceeee
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~-q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~ 134 (142)
++++.+.+++..+++.|.+.|++.+ |..+.. ..|+|..+ +.+.+.+.+.| ++++|++.
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~ 349 (425)
T 3ecd_A 286 DDFKTYIDRVLANAQALGDVLKAGG----VDLVTGGTDNHLLLVDLRPKGLKGAQVEQAL-ERAGITCN 349 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCC----CeeccCCCCceEEEEEeCCCCCCHHHHHHHH-HHcCCEec
Confidence 4556778888888888888888754 555543 34555443 44677888856 78899987
No 121
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=94.31 E-value=0.023 Score=46.55 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cccccceeecCC----CHHHHHHHhhhccceeeeCC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i-~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.+++++.+.++.|.+.|++.+ |..+ +...|.|..+-+ +..++..+|.+ .+|++.+.
T Consensus 314 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~Gi~v~~~ 376 (427)
T 2w8t_A 314 AHEKRERLWSNARALHGGLKAMG----FRLGTETCDSAIVAVMLEDQEQAAMMWQALLD-GGLYVNMA 376 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT----CEESCSSCCSSEEEEEESSHHHHHHHHHHHHH-TTEECEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcC----CcccCCCCCCCEEEEEECCHHHHHHHHHHHHH-CCeEEeee
Confidence 56678888888888888888774 5555 331444544433 35667766855 49998753
No 122
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=94.26 E-value=0.041 Score=44.85 Aligned_cols=18 Identities=6% Similarity=0.169 Sum_probs=12.8
Q ss_pred HHHHHHhhhccceeeeCCC
Q psy16706 119 TQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~~G 137 (142)
+++.++|. +.+|++.+.|
T Consensus 383 ~~~~~~l~-~~Gi~v~~~~ 400 (429)
T 4e77_A 383 KRFFHLML-EEGVYLAPSA 400 (429)
T ss_dssp HHHHHHHH-HTTEECCSST
T ss_pred HHHHHHHH-HCCeEEeecC
Confidence 56666574 5699998765
No 123
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=94.21 E-value=0.013 Score=47.92 Aligned_cols=113 Identities=17% Similarity=0.113 Sum_probs=53.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||. |.|+|++.+ +++..+.+...-......+|+.+| .++......|...+ + .+.+++
T Consensus 267 sK~~~~-------G~~iG~~~~---~~~~~~~~~~~~~~~~~~t~~~~~-~a~aaa~aal~~~~--~-------~~~~~~ 326 (429)
T 3k28_A 267 GKVIGG-------GLPVGAYGG---KAEIMRQVAPSGPIYQAGTLSGNP-LAMAAGYETLVQLT--P-------ESYVEF 326 (429)
T ss_dssp CGGGGT-------TSCCEEEEE---CHHHHTTBTTTSSBCCCCTTTTCH-HHHHHHHHHHHTCC--H-------HHHHHH
T ss_pred hhhhcC-------CCCeEEEEE---cHHHHhhhccCCCccccCCCCCCh-HHHHHHHHHHHHHH--H-------HHHHHH
Confidence 787765 689997643 444444332100001234555444 34444444555322 2 334444
Q ss_pred HHHHHHHHHHHHhcC--CCCCCccccccccceeecCCC-----------------HHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGLN-----------------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~--~~~~w~~i~~q~GmF~~~gl~-----------------~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.++.|.+.|++.. .+. ...+ ...|.|..+-+. .+++.++| .+.+|.+.+.|
T Consensus 327 ~~~~~~l~~~L~~~~~~~~~-~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~ 398 (429)
T 3k28_A 327 ERKAEMLEAGLRKAAEKHGI-PHHI-NRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-CCEE-EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST
T ss_pred HHHHHHHHHHHHHHHhhCCC-CEEE-EeeccEEEEEEecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC
Confidence 444444444444321 111 1222 344555444221 25666657 46799998743
No 124
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=94.17 E-value=0.28 Score=38.78 Aligned_cols=81 Identities=16% Similarity=0.104 Sum_probs=54.1
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cceeec----CCC
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCYT----GLN 117 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~----GmF~~~----gl~ 117 (142)
++++|..++..+...|.. .+.+.++.+.+++.+.|+.|.+.|++.| +..+..+. |.|..+ |.+
T Consensus 257 ~~~~~~~~~~a~~~al~~-----~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (396)
T 2ch1_A 257 HHTVASNLIFALREALAQ-----IAEEGLENQIKRRIECAQILYEGLGKMG----LDIFVKDPRHRLPTVTGIMIPKGVD 327 (396)
T ss_dssp CCCCCHHHHHHHHHHHHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHHT----CCBSSCSGGGBCTTEEEEECCTTCC
T ss_pred CCCCcHHHHHHHHHHHHH-----HHHhhHHHHHHHHHHHHHHHHHHHHHCC----CeeccCCccccCCceEEEEcCCCCC
Confidence 356776666655555531 1223477888899999999999998874 55554433 334332 567
Q ss_pred HHHHHHHhhhccceeeeC
Q psy16706 118 ATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 118 ~~qv~~~L~~~~~Iyl~~ 135 (142)
.+++.++|.++++|++.+
T Consensus 328 ~~~~~~~L~~~~gi~v~~ 345 (396)
T 2ch1_A 328 WWKVSQYAMNNFSLEVQG 345 (396)
T ss_dssp HHHHHHHHHHHHCBCCBC
T ss_pred HHHHHHHHHHhCCEEEec
Confidence 888887787778999875
No 125
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=94.12 E-value=0.026 Score=45.16 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=57.5
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHH-hhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIR-AFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R-~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||= |.|+|++.+ +++..+.+. ...+ .+|+ ++..++..+...|..-+ + +.+.++
T Consensus 251 sK~~~~-------G~r~G~~~~---~~~~~~~~~----~~~~~~~~~-~~~~~~~a~~~~l~~~~-------~-~~~~~~ 307 (406)
T 4adb_A 251 AKALGG-------GFPVGALLA---TEECARVMT----VGTHGTTYG-GNPLASAVAGKVLELIN-------T-PEMLNG 307 (406)
T ss_dssp CGGGGT-------TSCCEEEEE---CHHHHHTCC----TTSSCCSST-TCHHHHHHHHHHHHHHS-------S-HHHHHH
T ss_pred chhhcC-------CCCeEEEEE---cHHHHhhhc----cCCcCCCCC-CCHHHHHHHHHHHHHHH-------h-cCHHHH
Confidence 566653 779998443 444433332 2222 3444 44455555554443211 1 345566
Q ss_pred HHHHHHHHHHHHHhcCCC-CCCccccccccceeecCC------CHHHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYTGL------NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~-~~w~~i~~q~GmF~~~gl------~~~qv~~~L~~~~~Iyl~~~G 137 (142)
+.++|+.|.+.|++.+.. ..|..+ ...|+|..+.+ +.+++.++|. +.+|++.+.|
T Consensus 308 ~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~ 369 (406)
T 4adb_A 308 VKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLNADYAGQAKQISQEAA-KAGVMVLIAG 369 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECTTTTTCHHHHHHHHH-HTTEECEESS
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEeCCcHHHHHHHHHHHH-HCCcEEeecC
Confidence 666666666666554210 112222 23466655433 4677777685 5699998765
No 126
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=94.11 E-value=0.042 Score=44.66 Aligned_cols=18 Identities=11% Similarity=0.342 Sum_probs=13.0
Q ss_pred HHHHHHhhhccceeeeCCC
Q psy16706 119 TQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~~G 137 (142)
+++..+| .+++|.+.+.|
T Consensus 381 ~~l~~~l-~~~Gi~v~~~~ 398 (427)
T 3fq8_A 381 SRFHRGM-LEQGIYLAPSQ 398 (427)
T ss_dssp HHHHHHH-HHTTEECCSST
T ss_pred HHHHHHH-HHCCcEEecCC
Confidence 4666657 46799998876
No 127
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=93.97 E-value=0.36 Score=39.09 Aligned_cols=60 Identities=10% Similarity=0.062 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cc-----cceee-c-----CCCHHHHHHHhhhccceeeeC
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QI-----GMFCY-T-----GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~-q~-----GmF~~-~-----gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
+.++.+.++...+++.|.+.|++. |+ +..+.. +. .+|.+ + |.+.+++.+.| .+++|++.+
T Consensus 257 ~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L-~~~gI~v~~ 328 (424)
T 2po3_A 257 DAFPEVIDRNRRNHAAYREHLADL--PG-VLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVL-KAEGVHTRA 328 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSC--TT-EEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHH-HHTTEECBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC--CC-ccccCCCCCCccccEEEEEEECCccchhhHHHHHHHH-HHCCCceec
Confidence 345567777777777777777653 22 665542 22 23322 1 56788888856 678999875
No 128
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=93.83 E-value=0.03 Score=44.97 Aligned_cols=59 Identities=14% Similarity=0.166 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----ccee--ecCCCHHHHHHHhhhccceeeeC
Q psy16706 71 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFC--YTGLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 71 ~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~----GmF~--~~gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
.++++.+.++++.+|+.|.+.|++. |+ +..+..+. +++. +.+.+.+++...|.+ |.+.+
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---i~v~~ 343 (423)
T 3lvm_A 279 KEEMATEMERLRGLRNRLWNGIKDI--EE-VYLNGDLEHGAPNILNVSFNYVEGESLIMALKD---LAVSS 343 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTS--TT-EEEESCSTTBCTTEEEEEETTSCHHHHHHHTTT---EECBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--CC-EEEeCCccccCCCeEEEEeCCCCHHHHHHHHhh---heecc
Confidence 3447889999999999999999765 22 44444332 3333 347788888886744 66654
No 129
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=93.72 E-value=0.15 Score=42.12 Aligned_cols=118 Identities=16% Similarity=0.157 Sum_probs=59.4
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||. =+.|+|++.+ +++..+.+...-......+|+.+|.. +..+...|..-+ .+.+.+++.. ++.
T Consensus 287 sK~l~g------g~~~lg~v~~---~~~i~~~~~~~~~~~~~~t~~~~~~~-~aaa~aal~~~~-~~~~~~~~~~--~~~ 353 (459)
T 4a6r_A 287 AKGLSS------GYLPIGAVFV---GKRVAEGLIAGGDFNHGFTYSGHPVC-AAVAHANVAALR-DEGIVQRVKD--DIG 353 (459)
T ss_dssp CGGGGT------TSSCCEEEEE---CHHHHHHHHHHCTTHHHHHHCSCHHH-HHHHHHHHHHHH-HTCHHHHHHH--THH
T ss_pred hhhhcC------CCCCccceee---CHHHHHHhhcCCCcccCCCCCCCHHH-HHHHHHHHHHHh-cchHHHHHHH--HHH
Confidence 788776 4479997543 56666655432112345678776643 444444444110 1223333330 333
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------------HHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~---------------~~qv~~~L~~~~~Iyl~~~G 137 (142)
..+|+.|.+.|.+. |. ... ....|+|..+-+. ..++..+|. +.+|.+.+.|
T Consensus 354 ~~~~~~l~~~l~~~--~~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g 419 (459)
T 4a6r_A 354 PYMQKRWRETFSRF--EH-VDD-VRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFF-RNNLIMRACG 419 (459)
T ss_dssp HHHHHHHHHHHTTC--TT-EEE-EEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHH-HTTEECEEET
T ss_pred HHHHHHHHHHHhcC--CC-eEE-EEEEEEEEEEEEecCccccccccchHHHHHHHHHHHH-HCCeEEecCC
Confidence 34455554555432 21 222 2345666554331 456666574 5699988755
No 130
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=93.62 E-value=0.036 Score=44.42 Aligned_cols=84 Identities=12% Similarity=0.164 Sum_probs=47.6
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc-----ccceeecCCCHHH
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ-----IGMFCYTGLNATQ 120 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q-----~GmF~~~gl~~~q 120 (142)
+++|+..++..+...|.. +.. +.++.+.+++.+.|+.|.+.|++...+..+..+..+ .+|+++.--+.++
T Consensus 280 ~~~~~~~~~~a~~~al~~--~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (416)
T 1qz9_A 280 CGTQPITSLAMVECGLDV--FAQ---TDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPEGYA 354 (416)
T ss_dssp CSCCCHHHHHHHHHHHHH--HTT---SCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTTHHH
T ss_pred CCCCCHHHHHHHHHHHHH--HHh---cCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCCHHH
Confidence 445666555544444431 111 235677888888888888888775110015555442 4444333225777
Q ss_pred HHHHhhhccceeeeC
Q psy16706 121 VRRKLIHDRSLKLSN 135 (142)
Q Consensus 121 v~~~L~~~~~Iyl~~ 135 (142)
+.++| .+++|++..
T Consensus 355 l~~~l-~~~gi~~~~ 368 (416)
T 1qz9_A 355 VIQAL-IDRGVIGDY 368 (416)
T ss_dssp HHHHH-HTTTEECEE
T ss_pred HHHHH-HhCCcEecc
Confidence 87767 467998753
No 131
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=93.57 E-value=0.088 Score=43.61 Aligned_cols=116 Identities=12% Similarity=0.026 Sum_probs=56.6
Q ss_pred CcccccccCCCCcc-cccceeEEEeCCHHHHHHHHHHH---H-HHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVG-ERVGAFSIVSADKDEAARILSQL---K-ILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKG 76 (142)
Q Consensus 2 SKnfgL~~~~~~Yg-eRvGal~vv~~~~~~~~~v~sql---~-~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~ 76 (142)
||.+|- | .|+|++.+ +++..+.+...- . .....+|+.+|.. +..+...|..-+ .+.+ ++.
T Consensus 289 sK~l~g-------G~~~lg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~-~aaa~aal~~~~-~~~~---~~~ 353 (460)
T 3gju_A 289 AKGLTS-------AYAPLSGVIV---ADRVWQVLVQGSDKLGSLGHGWTYSAHPIC-VAAGVANLELID-EMDL---VTN 353 (460)
T ss_dssp CGGGTT-------TSSCCEEEEE---EHHHHHHHHHHHHHHCSCSCCCTTTTCHHH-HHHHHHHHHHHH-HTTH---HHH
T ss_pred ehhhcC-------CCCCeEEEEE---CHHHHHHHhcccccccccccCCCCCCCHHH-HHHHHHHHHHHH-hccH---HHH
Confidence 677655 4 79997554 455555544210 0 1223566666643 333333333100 0122 233
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------------HHHHHHHhhhccceeeeCCC
Q psy16706 77 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~---------------~~qv~~~L~~~~~Iyl~~~G 137 (142)
++++....|+.|.+.+.+.. . .. .....|.|..+-+. ..++.++| .+.+|.+.+.|
T Consensus 354 ~~~~~~~~~~~l~~~l~~~~--~-~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~ 424 (460)
T 3gju_A 354 AGETGAYFRAELAKAVGGHK--N-VG-EVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL-AASGVIGRAMP 424 (460)
T ss_dssp HHHHHHHHHHHHHHHHTTST--T-EE-EEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEECS
T ss_pred HHHHHHHHHHHHHHHHhcCC--C-eE-EEeeeeEEEEEEEccCccccccccchHHHHHHHHHHH-HHCCeEEecCC
Confidence 44444455556655554432 1 22 23345666544331 34566646 46799998766
No 132
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=93.55 E-value=0.09 Score=42.82 Aligned_cols=102 Identities=16% Similarity=0.164 Sum_probs=59.4
Q ss_pred CcccccccCCCCcc-cccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVG-ERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~Yg-eRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||. | .|+|++.+ + ++.+ .+ . .....+|+.+| .++..+...|.. + ++ +.++
T Consensus 280 sK~~~~-------G~~riG~~~~--~-~~~~-~~-~---~~~~~t~~~n~-~~~~aa~aal~~--~-----~~---~~~~ 333 (419)
T 2eo5_A 280 AKALGG-------GIMPIGATIF--R-KDLD-FK-P---GMHSNTFGGNA-LACAIGSKVIDI--V-----KD---LLPH 333 (419)
T ss_dssp CGGGGT-------TTSCCEEEEE--E-GGGC-CC----------CCCCCH-HHHHHHHHHHHH--H-----HH---HHHH
T ss_pred cccccC-------CccceEEEEE--c-hHhh-cC-C---cccCCCCCCCH-HHHHHHHHHHHH--H-----HH---HHHH
Confidence 676665 7 89999765 2 2233 33 1 23345666544 445555555542 1 12 6788
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----HHHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~-----~~qv~~~L~~~~~Iyl~~~G 137 (142)
+.+.|+.|.+.|++. +..+ ...|.|..+-+. .+ +..+|. +++|.+.+.|
T Consensus 334 ~~~~~~~l~~~L~~~-----~~~~-~~~g~~~~i~~~~~~~~~~-~~~~l~-~~Gv~v~~~~ 387 (419)
T 2eo5_A 334 VNEIGKIFAEELQGL-----ADDV-RGIGLAWGLEYNEKKVRDR-IIGESF-KRGLLLLPAG 387 (419)
T ss_dssp HHHHHHHHHHHHTTS-----SSEE-EEETTEEEEECSCHHHHHH-HHHHHH-HTTEECEEET
T ss_pred HHHHHHHHHHHHHHh-----hhhe-EeeeEEEEEEEecCccHHH-HHHHHH-HCCCEEecCC
Confidence 888888888888764 2223 345777766662 33 656574 7899998754
No 133
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=93.34 E-value=0.023 Score=46.40 Aligned_cols=18 Identities=6% Similarity=0.322 Sum_probs=13.1
Q ss_pred HHHHHHhhhccceeeeCCC
Q psy16706 119 TQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~~G 137 (142)
+++..+|. +++|++.+.|
T Consensus 385 ~~~~~~l~-~~Gv~v~~~~ 402 (434)
T 2epj_A 385 VKLHEEML-RRGVFIAPSN 402 (434)
T ss_dssp HHHHHHHH-HTTEECCSST
T ss_pred HHHHHHHH-HCCeEEeccC
Confidence 56666575 6799998765
No 134
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=93.28 E-value=0.075 Score=41.42 Aligned_cols=61 Identities=15% Similarity=0.097 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cceee--cCCCHHHHHHHhhhccceeeeCC
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCY--TGLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~----GmF~~--~gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.++.+.+++++.|+.|.+.|++. |+ +..+..+. +++++ .+.+.+++...| .+++|++.+.
T Consensus 252 ~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g 318 (382)
T 4hvk_A 252 MEWREEAERLRRLRDRIIDNVLKI--EE-SYLNGHPEKRLPNNVNVRFSYIEGESIVLSL-DMAGIQASTG 318 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTS--TT-EEECSCSSSBCTTEEEEEETTCCHHHHHHHH-HHTTCBCBCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcC--CC-eEEeCCccccCCCEEEEEECCCCHHHHHHHH-HHCCEEEeeC
Confidence 456778889999999999998754 22 44333221 23333 367888888867 6679988764
No 135
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=93.17 E-value=0.94 Score=34.90 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=50.8
Q ss_pred CCCchHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccceeec------CC
Q psy16706 48 SPPIHGARIVQEILGDPKLKSQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYT------GL 116 (142)
Q Consensus 48 ~pp~~Ga~iv~~IL~dp~L~~~W~~E--l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~---q~GmF~~~------gl 116 (142)
+++..++..+...|. .+.++ ++.+.+++++.|+.|.+.|++.+ +..+.. ..|+|..+ +.
T Consensus 242 ~~~~~~~~a~~~al~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (366)
T 1m32_A 242 TSPTHTVLAFAQALK------ELAKEGGVAARHQRYQQNQRSLVAGMRALG----FNTLLDDELHSPIITAFYSPEDPQY 311 (366)
T ss_dssp CCCHHHHHHHHHHHH------HHHHHTHHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCCCTTC
T ss_pred CCCHHHHHHHHHHHH------HHHHccCHhHHHHHHHHHHHHHHHHHHHCC----CeeccCchhcCceEEEEEcCccCCC
Confidence 455555544444443 23444 67788999999999999998864 444432 46755443 45
Q ss_pred CHHHHHHHhhhccceeeeCC
Q psy16706 117 NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 117 ~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.+++.++|. +++|++.+.
T Consensus 312 ~~~~~~~~l~-~~gi~v~~~ 330 (366)
T 1m32_A 312 RFSEFYRRLK-EQGFVIYPG 330 (366)
T ss_dssp CHHHHHHHHH-HTTEECEEC
T ss_pred CHHHHHHHHH-HCCEEEECC
Confidence 6788888785 559998754
No 136
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=93.14 E-value=0.63 Score=37.32 Aligned_cols=106 Identities=17% Similarity=0.088 Sum_probs=55.4
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhc------------CCCCchHHHHHHHHhCChhhHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFY------------SSPPIHGARIVQEILGDPKLKSQ 69 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~------------S~pp~~Ga~iv~~IL~dp~L~~~ 69 (142)
||.||. +| |.|++ ++++++..+.+... ....+ ..++..++.++...|
T Consensus 212 sK~~~~------~G-~~g~~--~~~~~~~~~~l~~~----~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l-------- 270 (399)
T 2oga_A 212 GKNLGC------FG-DGGAV--VTGDPELAERLRML----RNYGSRQKYSHETKGTNSRLDEMQAAVLRIRL-------- 270 (399)
T ss_dssp TSSSCC------SS-CCEEE--EESCHHHHHHHHHH----HBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHH--------
T ss_pred CccCCc------CC-ceEEE--EeCCHHHHHHHHHH----HhcCccccccccccccCCCcCHHHHHHHHHHH--------
Confidence 699999 99 87754 45667666555432 11111 122333333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc--cccccccee-----ecCCCHHHHHHHhhhccceeeeC
Q psy16706 70 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH--ITDQIGMFC-----YTGLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 70 W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~--i~~q~GmF~-----~~gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
+.++.+.++...+++.+.+.|++. |+ +.. .+. .+.|. ..+.+.+++...| .+++|++.+
T Consensus 271 --~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~ 336 (399)
T 2oga_A 271 --AHLDSWNGRRSALAAEYLSGLAGL--PG-IGLPVTAP-DTDPVWHLFTVRTERRDELRSHL-DARGIDTLT 336 (399)
T ss_dssp --HTHHHHHHHHHHHHHHHHHHTTTC--TT-CBCCCCCT-TEECCCSSEEEECSSHHHHHHHH-HHTTBCCBC
T ss_pred --HHHHHHHHHHHHHHHHHHHHhccC--CC-ccccCCCC-CCcceeEEEEEECCCHHHHHHHH-HHCCCceec
Confidence 222334455556677777777654 22 222 222 23322 2234788888868 568998865
No 137
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=93.04 E-value=0.15 Score=41.78 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=13.9
Q ss_pred HHHHHHhhhccceeeeCCCcc
Q psy16706 119 TQVRRKLIHDRSLKLSNVEKC 139 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~~Gri 139 (142)
+++..+|. +++|++.+.+++
T Consensus 391 ~~l~~~l~-~~Gv~v~~~~~~ 410 (453)
T 2cy8_A 391 AAMRMALI-LEGVDIGGRGSV 410 (453)
T ss_dssp HHHHHHHH-HTTEECBTTTEE
T ss_pred HHHHHHHH-HCCeEEeCCCCE
Confidence 56666675 579999776654
No 138
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=92.67 E-value=0.07 Score=43.32 Aligned_cols=111 Identities=16% Similarity=0.179 Sum_probs=54.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHH-hhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIR-AFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R-~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||. |.|+|++.+ +++..+.+... ...+ .+|+.+| .++..+...|.. +.+ +.+.++
T Consensus 271 sK~~~~-------G~~ig~~~~---~~~~~~~~~~~--~~~~~~t~~~~~-~~~~a~~aal~~--~~~------~~~~~~ 329 (433)
T 1zod_A 271 SKTLGA-------GLPLAAIVT---SAAIEERAHEL--GYLFYTTHVSDP-LPAAVGLRVLDV--VQR------DGLVAR 329 (433)
T ss_dssp CHHHHT-------TSSCEEEEE---CHHHHHHHHHT--TCCCCCTTTTCH-HHHHHHHHHHHH--HHH------TTHHHH
T ss_pred cccccC-------CCCeeEEEE---hHHHHHhhccC--CCCCCCCCCcCH-HHHHHHHHHHHH--HHh------CCHHHH
Confidence 677766 779998654 34555444321 0111 4555444 333333333321 100 123344
Q ss_pred HHHHHHHHHHHHHhc--CCCCCCccccccccceeecCC------------CHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL------------NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~--~~~~~w~~i~~q~GmF~~~gl------------~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.++|+.|.+.|++. ..|. +..+ ...|+|..+-+ ..+++..+|. +.+|.+.+.
T Consensus 330 ~~~~~~~l~~~l~~l~~~~~~-~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~ 396 (433)
T 1zod_A 330 ANVMGDRLRRGLLDLMERFDC-IGDV-RGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIV 396 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-EEEE-EEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCC-eEEE-EEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEecc
Confidence 555555555555543 1221 2222 34566655533 1566776675 689998764
No 139
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=92.57 E-value=0.27 Score=40.11 Aligned_cols=49 Identities=16% Similarity=-0.033 Sum_probs=28.8
Q ss_pred CcccccccCCCCccccc-ceeEEEeCCHHHHHHHHHHHHHHHHhhc--CCCCchHHHHHHHHhCC
Q psy16706 2 KKNYGIHFTCLPVGERV-GAFSIVSADKDEAARILSQLKILIRAFY--SSPPIHGARIVQEILGD 63 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRv-Gal~vv~~~~~~~~~v~sql~~~~R~~~--S~pp~~Ga~iv~~IL~d 63 (142)
||.||+ .|.|+ |.+.+ + ++.++ .++... +..| ++++..++..+...|.+
T Consensus 208 sK~~~~------~g~ri~G~~~~--~-~~~~~---~~l~~~-~~~~~g~~~~~~~~~~~~~~l~~ 259 (404)
T 1e5e_A 208 TKYING------HTDVVAGLICG--K-ADLLQ---QIRMVG-IKDITGSVISPHDAWLITRGLST 259 (404)
T ss_dssp TTTTTC------SSCCCCEEEEE--C-HHHHH---HHHHTC-CCCCCCCCCCHHHHHHHHHHHTT
T ss_pred ccccCC------CCCCeEEEEEE--C-HHHHH---HHHHHH-HHhCCCCCCCHHHHHHHHHhHhH
Confidence 899999 99998 65443 3 33322 133332 3333 44565667777777765
No 140
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=92.49 E-value=0.77 Score=36.30 Aligned_cols=60 Identities=10% Similarity=-0.038 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--ccc--ceeecCCCHHHHHHHhhhccceeeeCC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIG--MFCYTGLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~--q~G--mF~~~gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++...++.+++++.+.+.|++.+.. ...... ..+ +|....-+.+++.+.| .+.+|++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~GI~~~~~ 308 (367)
T 3nyt_A 245 FEEEIALRQKVAAEYDLSLKQVGIG--TPFIEVNNISVYAQYTVRMDNRESVQASL-KAAGVPTAVH 308 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCTTEECCCSSEEEECSSHHHHHHHH-HHHTCCCBCS
T ss_pred HHHHHHHHHHHHHHHHHHhccCCee--ccCCCCCCceeeEEEEEEeCCHHHHHHHH-HHCCCceecc
Confidence 3444555566667777778776411 111111 111 2222222778888867 5678887543
No 141
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=92.20 E-value=0.39 Score=39.17 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccceeecC-------C-----CHHHHHHHhhhccceeeeC
Q psy16706 84 MRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-------L-----NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 84 ~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g-------l-----~~~qv~~~L~~~~~Iyl~~ 135 (142)
.++.|.+.|++.+ +..+..+.|+|.++. + +.+++..+|.++++|.+.+
T Consensus 331 ~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~ 390 (467)
T 1ax4_A 331 QVKYLGDRLREAG----IPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVE 390 (467)
T ss_dssp HHHHHHHHHHHTT----CCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHHhCC----CCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeee
Confidence 3556667776633 555566778887655 3 3566777675788999876
No 142
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=92.12 E-value=0.25 Score=39.71 Aligned_cols=53 Identities=17% Similarity=0.073 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeee
Q psy16706 75 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 75 ~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~ 134 (142)
+.+++++.+.|+.|.+.|++.+ |... ..|+|..+-+ +.+++..+|.+ .+|++.
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~g----~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~-~Gv~v~ 363 (409)
T 3kki_A 307 DNRRQHLDRMARKLRIGLSQLG----LTIR--SESQIIGLETGDERNTEKVRDYLES-NGVFGS 363 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT----CCCC--CSSSEEEEEEESHHHHHHHHHHHHH-TTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CccC--CCCCEEEEEeCCHHHHHHHHHHHHH-CCceEe
Confidence 5778888888999999998875 5544 3666666644 24456666855 499984
No 143
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=91.69 E-value=0.54 Score=36.66 Aligned_cols=53 Identities=4% Similarity=0.055 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccc-cccccceee--cCCC----HHHHHHHhhhccceeeeCC
Q psy16706 80 RIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCY--TGLN----ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 80 ri~~~R~~L~~~l~~~~~~~~w~~i-~~q~GmF~~--~gl~----~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.+.|+.+.+.|++. |+ +... ....+.|.+ ++.. .+++.++| .+++|.+.+.
T Consensus 262 ~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~GV~v~~g 321 (359)
T 3pj0_A 262 EYFEAAKGLAERFNSC--SG-VKTVPEVPVSNMFHVYFENSADEIGAILTKIQ-DETGVGISGY 321 (359)
T ss_dssp HHHHHHHHHHHHHHTS--TT-EEEESSSCSSSEEEEEESSCHHHHHHHHHHHH-HHHCEECCSC
T ss_pred HHHHHHHHHHHHHhhC--CC-ceeeccCCcceEEEEEecCccchhHHHHHHHH-HhcCcEecCC
Confidence 3455677788888875 22 5443 223344444 3432 56777756 6789998875
No 144
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=91.63 E-value=1.4 Score=34.01 Aligned_cols=54 Identities=11% Similarity=0.091 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhhhccceeeeC
Q psy16706 77 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
+.+++..+++.|.+.|++. +| +.......|+|.++.++. ++.++| .+++|.+.+
T Consensus 265 ~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~-~~~~~l-~~~gi~v~~ 318 (356)
T 1v72_A 265 NARKANAAAQRLAQGLEGL--GG-VEVLGGTEANILFCRLDS-AMIDAL-LKAGFGFYH 318 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTC--TT-EEEESCCCSSEEEEEECH-HHHHHH-HHTTCBCBC
T ss_pred HHHHHHHHHHHHHHHHhhC--CC-cEEccCCCccEEEEEcCH-HHHHHH-HhcCeEEec
Confidence 3556667777888888763 22 555445667777777765 555558 567898874
No 145
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=91.52 E-value=0.15 Score=41.45 Aligned_cols=115 Identities=10% Similarity=0.087 Sum_probs=52.3
Q ss_pred CcccccccCCCCcc-cccceeEEEeCCHHHHHHHHHHHH-HHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVG-ERVGAFSIVSADKDEAARILSQLK-ILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMAD 79 (142)
Q Consensus 2 SKnfgL~~~~~~Yg-eRvGal~vv~~~~~~~~~v~sql~-~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ 79 (142)
||.||. | -|+|++.+ +++.++.+...-. .....+|+.+| .++..+...|..-+ .+.+.+++ ++
T Consensus 260 sK~l~~-------G~~r~G~~~~---~~~i~~~~~~~~~~~~~~~t~~~~~-~~~aaa~aal~~~~-~~~~~~~~---~~ 324 (430)
T 3i4j_A 260 GKGLAA-------GYAPLAGLLA---APQVYETVMGGSGAFMHGFTYAGHP-VSVAAGLSVLDIVE-REDLTGAA---KE 324 (430)
T ss_dssp CGGGTT-------TSSCCEEEEE---CHHHHHHHHHTTCBCCCCCTTTTCH-HHHHHHHHHHHHHH-HTTHHHHH---HH
T ss_pred cccccC-------CccccEEEEE---CHHHHHHHhccCCcccccCCCCCCH-HHHHHHHHHHHHHH-cccHHHHH---HH
Confidence 676664 7 89997654 5555444332100 02345665444 34444444443211 02222222 33
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------------HHHHHHHhhhccceeeeCC
Q psy16706 80 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------------ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 80 ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~-------------~~qv~~~L~~~~~Iyl~~~ 136 (142)
+....|+.|.+.+.+. |+ +.. ....|.|..+.+. .+++.++|. +.+|.+.+.
T Consensus 325 ~~~~~~~~l~~~~~~~--~~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~ 389 (430)
T 3i4j_A 325 RGAQLLAGLQALQARF--PQ-MMQ-VRGTGLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPG 389 (430)
T ss_dssp HHHHHHHHHHHHHHHC--TT-EEE-EEEETTEEEEEEC------------CHHHHHHHHH-HTTEECC--
T ss_pred HHHHHHHHHHHHHHhC--CC-eEE-EEEEEEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEec
Confidence 3333333333333232 21 222 2345777665442 155666574 789998875
No 146
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=91.20 E-value=1.4 Score=36.22 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-----CCCCCCccccc-cccceeec-----CCCHHHHHHHhhhccceeeeC
Q psy16706 73 EVKGMADRIISMRQSLKDNLQKE-----GSNKPWNHITD-QIGMFCYT-----GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 73 El~~m~~ri~~~R~~L~~~l~~~-----~~~~~w~~i~~-q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
+++.+.+++...++.|.+.|++. | +..+.. ..+.|..+ |++.+.+.. +.++.+|.+.+
T Consensus 299 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~GI~v~~ 367 (447)
T 3h7f_A 299 EFADRQRRTLSGARIIADRLMAPDVAKAG----VSVVSGGTDVHLVLVDLRDSPLDGQAAED-LLHEVGITVNR 367 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSHHHHHTT----CEEGGGSCSSSEEEEECTTSSCCHHHHHH-HHHHTTEECBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCC----eEEecCCCCCCEEEEEcCCCCCCHHHHHH-HHHHCCeEEec
Confidence 45667777888888888888765 4 444431 22333332 457888888 44788998873
No 147
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=91.14 E-value=0.48 Score=37.01 Aligned_cols=51 Identities=4% Similarity=0.055 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCccc-cccccceeecCC--C----HHHHHHHhhhccceeeeCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYTGL--N----ATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i-~~q~GmF~~~gl--~----~~qv~~~L~~~~~Iyl~~~ 136 (142)
.+.|+.+.+.|++. |+ +... ....+.|.++-+ . .+++.+.| .+++|.+.+.
T Consensus 262 ~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~g 319 (357)
T 3lws_A 262 YEQAKQLAEQFNAL--PG-VHTTPEVPVSNMFHLHFDGQAADISPKLEQVQ-EETGLGFVGY 319 (357)
T ss_dssp HHHHHHHHHHHHTS--TT-EEEESSSCSSSEEEEEEESCHHHHHHHHHHHH-HHHCEESCSC
T ss_pred HHHHHHHHHHHHhC--CC-CeeccCCCcceEEEEEecCChHHHHHHHHHHH-HhcCeEEecc
Confidence 44577777888765 22 5542 334566666543 2 46677656 6789988764
No 148
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=90.94 E-value=0.14 Score=41.63 Aligned_cols=18 Identities=6% Similarity=0.141 Sum_probs=12.4
Q ss_pred HHHHHHhhhccceeeeCCC
Q psy16706 119 TQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~~G 137 (142)
+++.++| .+.+|++.+.|
T Consensus 384 ~~~~~~l-~~~Gv~v~~~~ 401 (434)
T 3l44_A 384 GKFFKLM-LQEGVNLAPSK 401 (434)
T ss_dssp HHHHHHH-HHTTEECCSST
T ss_pred HHHHHHH-HHCCeEEeecC
Confidence 5566657 46799988765
No 149
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=90.70 E-value=1.1 Score=34.88 Aligned_cols=62 Identities=13% Similarity=0.213 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cccccceeecCCCHHHHHHHhhhccceeeeCCC
Q psy16706 71 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYTGLNATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 71 ~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i-~~q~GmF~~~gl~~~qv~~~L~~~~~Iyl~~~G 137 (142)
...++.+.+++.+.|+.|.+.|++.+ +..+ +.+.+++++..-+.+++.++|. +++|++.+.+
T Consensus 304 ~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~ 366 (397)
T 3f9t_A 304 REGQRKIVNECMENTLYLYKKLKENN----FKPVIEPILNIVAIEDEDYKEVCKKLR-DRGIYVSVCN 366 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCCSSSEEEEECTTHHHHHHHHH-HTTCBCEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC----CEEEcCCCccEEEEEeCCHHHHHHHHH-hCCeEEeccC
Confidence 44566777888888999999998874 4433 3345555544445678877674 5699987655
No 150
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=90.58 E-value=0.74 Score=37.50 Aligned_cols=51 Identities=18% Similarity=0.169 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CH-----HHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NA-----TQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-------~~-----~qv~~~L~~~~~Iyl~~~G 137 (142)
.+.++.|.+.|++.+ +..+ .+.|++.++.+ +. +++..+|..+.+|++.+.|
T Consensus 331 ~~~~~~l~~~L~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~ 393 (467)
T 2oqx_A 331 IAQVQYLVDGLEEIG----VVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIG 393 (467)
T ss_dssp HHHHHHHHHHHHHTT----CCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEES
T ss_pred HHHHHHHHHHHHHCC----Ceee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccc
Confidence 445666777787663 5555 56677666543 32 2234447567899987643
No 151
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=90.47 E-value=0.061 Score=43.88 Aligned_cols=19 Identities=11% Similarity=0.065 Sum_probs=12.5
Q ss_pred HHHHHHHhhhccceeeeCCC
Q psy16706 118 ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 118 ~~qv~~~L~~~~~Iyl~~~G 137 (142)
..++.++|. +.+|++.+.|
T Consensus 374 ~~~~~~~l~-~~Gv~v~~~~ 392 (439)
T 3dxv_A 374 TAKLIYRAY-QLGLVVYYVG 392 (439)
T ss_dssp HHHHHHHHH-HHTEECEEES
T ss_pred HHHHHHHHH-HCCcEEeecC
Confidence 455666574 5699887655
No 152
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=90.39 E-value=0.33 Score=39.34 Aligned_cols=57 Identities=7% Similarity=0.242 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHhcC-CCCCCccccccccceeecC----CCHHHHHHHhhhccceeeeCC
Q psy16706 77 MADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTG----LNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~-~~~~w~~i~~q~GmF~~~g----l~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.+++.++|+.|.+.|++.+ .|+ +..+. ..|.|..+- .+.+++...|. +++|++.+.
T Consensus 332 ~~~~~~~~~~~l~~~L~~l~~~~~-~~~~~-~~g~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~ 393 (429)
T 1s0a_A 332 WQQQVADIEVQLREQLAPARDAEM-VADVR-VLGAIGVVETTHPVNMAALQKFFV-EQGVWIRPF 393 (429)
T ss_dssp HHHHHHHHHHHHHHHHGGGGGCTT-EEEEE-EETTEEEEEESSCBCHHHHHHHHH-HTTEECCCB
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-EEEEE-EeeEEEEEEECCcccHHHHHHHHH-HCCCEEecc
Confidence 44566666777777777652 232 32222 346665553 35777877685 689998764
No 153
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=90.30 E-value=1.8 Score=36.29 Aligned_cols=57 Identities=16% Similarity=0.256 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc-cceee--c---CCCHHHHHHHhhhccceeee
Q psy16706 73 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI-GMFCY--T---GLNATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 73 El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~-GmF~~--~---gl~~~qv~~~L~~~~~Iyl~ 134 (142)
+++.+.+++...|+.|.+.|++.| +..+.... .++.. + |++.+++.+.| ++.+|.+.
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L-~~~gI~v~ 384 (483)
T 1rv3_A 322 EFKEYQRQVVANCRALSAALVELG----YKIVTGGSDNHLILVDLRSKGTDGGRAEKVL-EACSIACN 384 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHH-HHTTEECE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcC----CEeccCCCCCceEEEeccCCCCCHHHHHHHH-HhCCcEEe
Confidence 456788888888999999998875 44443321 12222 2 56888898856 78999987
No 154
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=88.39 E-value=0.5 Score=38.18 Aligned_cols=26 Identities=8% Similarity=0.167 Sum_probs=17.1
Q ss_pred ccceeecCC-CHHHHHHHhhhccceeeeC
Q psy16706 108 IGMFCYTGL-NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 108 ~GmF~~~gl-~~~qv~~~L~~~~~Iyl~~ 135 (142)
.|||++. + .++++.. +.++.+|+...
T Consensus 304 g~~~~~~-l~~~~~~~~-~l~~~~i~~~~ 330 (389)
T 3acz_A 304 GSTFLFE-MKSFEAAKK-LMEHLKVCTLA 330 (389)
T ss_dssp CSEEEEE-ESSHHHHHH-HHTTCSSSEEB
T ss_pred CeEEEEE-ECCHHHHHH-HHHhCCCcEEC
Confidence 5666654 3 2777877 55778887754
No 155
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=88.17 E-value=0.32 Score=39.67 Aligned_cols=111 Identities=16% Similarity=0.145 Sum_probs=55.2
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||- |.|+|++.+ + ++.++.+.. .....+|+.+| .++..+...|..-+ + +.+.+++
T Consensus 269 sK~l~~-------G~~iG~~~~--~-~~l~~~l~~---~~~~~t~~~~~-~~~aa~~a~L~~~~--~------~~~~~~~ 326 (420)
T 2pb2_A 269 AKALGG-------GFPVSAMLT--T-QEIASAFHV---GSHGSTYGGNP-LACAVAGAAFDIIN--T------PEVLQGI 326 (420)
T ss_dssp CGGGGT-------TSCCEEEEE--C-HHHHTTCC-------CCEECCCH-HHHHHHHHHHHHHS--S------HHHHHHH
T ss_pred cccccC-------CCceEEEEE--h-HHHHHhhcC---CCcCcccCcCH-HHHHHHHHHHHHHH--h------ccHHHHH
Confidence 566654 678997664 3 344433322 11234555444 44444444443211 0 1344555
Q ss_pred HHHHHHHHHHHHhc--CCCCCCccccccccceeecCC------CHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL------NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~--~~~~~w~~i~~q~GmF~~~gl------~~~qv~~~L~~~~~Iyl~~~G 137 (142)
+++++.|.+.|++. +.|. ...+. ..|+|..+-+ +.+++..+|. +++|.+.+.|
T Consensus 327 ~~~~~~l~~~L~~~~~~~~~-~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~ 387 (420)
T 2pb2_A 327 HTKRQQFVQHLQAIDEQFDI-FSDIR-GMGLLIGAELKPKYKGRARDFLYAGA-EAGVMVLNAG 387 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-EEEEE-EETTEEEEEECGGGTTCHHHHHHHHH-HTTEECEESS
T ss_pred HHHHHHHHHHHHHHHhcCCC-eEEEE-ecceEEEEEECCCchHHHHHHHHHHH-HCCCEEEeCC
Confidence 55666666666543 2221 11122 3466655433 3667777685 5899987754
No 156
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=87.97 E-value=0.31 Score=40.93 Aligned_cols=114 Identities=18% Similarity=0.158 Sum_probs=53.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.+|. =+.|+|++.+ +++.++.+. .-....-.+|+.+|.. +......|.. +.. +.+.+++
T Consensus 291 sK~l~g------g~~plG~v~~---~~~i~~~~~-~~~~~~~~t~~~np~a-~aAa~aaL~~--~~~------~~~~~~~ 351 (472)
T 3hmu_A 291 AKGLSS------GYAPIGGSIV---CDEVAHVIG-KDEFNHGYTYSGHPVA-AAVALENLRI--LEE------ENILDHV 351 (472)
T ss_dssp CGGGTT------TSSCCEEEEE---EHHHHHHHT-TSCBCCCCTTTTCHHH-HHHHHHHHHH--HHH------TTHHHHH
T ss_pred chhhhc------CCcceEEEEE---CHHHHHhcc-cCCccccCCCCCCHHH-HHHHHHHHHH--HHH------hHHHHHH
Confidence 788777 5589997654 455554441 1000112356555533 3333333321 100 1233333
Q ss_pred H-HHHHHHHHHHHhcC-CCCCCccccccccceeecCCC----------------HHHHHHHhhhccceeeeCCC
Q psy16706 82 I-SMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTGLN----------------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~-~~R~~L~~~l~~~~-~~~~w~~i~~q~GmF~~~gl~----------------~~qv~~~L~~~~~Iyl~~~G 137 (142)
. ++++.|.+.|+++. .|. ... ....|.|..+-+. ..++.++| .+.+|++.+.|
T Consensus 352 ~~~~~~~l~~~L~~l~~~~~-v~~-vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g 422 (472)
T 3hmu_A 352 RNVAAPYLKEKWEALTDHPL-VGE-AKIVGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG 422 (472)
T ss_dssp HHTHHHHHHHHHHGGGGSTT-EEE-EEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET
T ss_pred HHHHHHHHHHHHHHHhcCCC-eEE-EEecCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC
Confidence 3 33444444444332 121 222 2356666554331 44566657 46799887654
No 157
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=87.35 E-value=0.34 Score=38.58 Aligned_cols=113 Identities=20% Similarity=0.242 Sum_probs=52.6
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHH-HHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDE-AARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~-~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||. |.|+|++.+ +++. .+.+... ....+|+.+| .++......|..-+ .++|.+.+..+.++
T Consensus 247 sK~~~~-------G~~~G~~~~---~~~~~~~~~~~~---~~~~~~~~~~-~~~~aa~aal~~~~-~~~~~~~~~~~~~~ 311 (395)
T 3nx3_A 247 AKALGC-------GLSVGAFVI---NQKVASNSLEAG---DHGSTYGGNP-LVCAGVNAVFEIFK-EEKILENVNKLTPY 311 (395)
T ss_dssp CGGGTT-------TSCCEEEEE---CHHHHHHHSCTT---CCSSCBSCCH-HHHHHHHHHHHHHH-HTTHHHHHHHHHHH
T ss_pred cccccC-------CCceEEEEE---chhhhhhhcCCc---ccCCCCCCCH-HHHHHHHHHHHHHH-hhHHHHHHHHHHHH
Confidence 676665 779997643 3444 3333210 1124555444 33444434443110 12333333333333
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.|+.|.+.+.+.. . +..+ ...|.|..+.+ +.+++.++| .+.+|.+.+.|
T Consensus 312 ---~~~~l~~~~~~~~--~-~~~~-~~~g~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~ 364 (395)
T 3nx3_A 312 ---LEQSLDELINEFD--F-CKKR-KGLGFMQGLSLDKSVKVAKVIQKC-QENALLLISCG 364 (395)
T ss_dssp ---HHHHHHHHHHHCT--T-EEEE-EEETTEEEEEECTTSCHHHHHHHH-HHTTEECEEET
T ss_pred ---HHHHHHHHHHhCC--C-eEEE-EeEEEEEEEEeCCcchHHHHHHHH-HHCCCEEecCC
Confidence 3333333333322 1 2222 34566655533 466777757 56799887654
No 158
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=87.00 E-value=4.6 Score=32.67 Aligned_cols=55 Identities=11% Similarity=0.167 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-------CCHHHH-----HHHhhhccceeeeC
Q psy16706 77 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-------LNATQV-----RRKLIHDRSLKLSN 135 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~g-------l~~~qv-----~~~L~~~~~Iyl~~ 135 (142)
+.++...+.+.|.+.|++.+ +..+..+.|+|.++. .+.+++ ..+|.++++|.+++
T Consensus 314 ~~~~~~~~~~~l~~~L~~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~ 380 (456)
T 2ez2_A 314 YIEHRVKQVRYLGDKLKAAG----VPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSME 380 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHTT----CCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEE
T ss_pred HHHHHHHHHHHHHHHHhcCC----CccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeec
Confidence 33444445566667777643 555555678887753 344444 44365678888654
No 159
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=86.99 E-value=0.09 Score=41.19 Aligned_cols=55 Identities=9% Similarity=0.094 Sum_probs=36.9
Q ss_pred HHHHHH--HHHHHHHHHHHHhcCCCCCCcccccc--ccceeecCC-CHHHHHHHhhhccceeeeC
Q psy16706 76 GMADRI--ISMRQSLKDNLQKEGSNKPWNHITDQ--IGMFCYTGL-NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 76 ~m~~ri--~~~R~~L~~~l~~~~~~~~w~~i~~q--~GmF~~~gl-~~~qv~~~L~~~~~Iyl~~ 135 (142)
.+.+++ +++|+.|.+.|++.+ +..+... .|.|..+-+ +.+++.++|. +++|++.+
T Consensus 267 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~ 326 (371)
T 2e7j_A 267 RIKRWDEEVEKARRFAAEMEKLG----IKQLGDNPHNHDLMFFHAEVLYEISKKAK-GGRFFLYR 326 (371)
T ss_dssp HGGGHHHHHHHHHHHHHHHHHTT----CEEESSSSCCSSEEEEECHHHHHHHHHSS-SGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----cEEecCCCccCceEEEECCCHHHHHHHHH-HCCEEEEe
Confidence 566777 778888888888763 5555442 244444444 5677877674 88998765
No 160
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=86.49 E-value=0.17 Score=41.52 Aligned_cols=18 Identities=11% Similarity=0.176 Sum_probs=12.4
Q ss_pred HHHHHHhhhccceeeeCCC
Q psy16706 119 TQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~~G 137 (142)
.++.++| .+.+|++.+.|
T Consensus 398 ~~~~~~l-~~~Gv~~~~~~ 415 (452)
T 3n5m_A 398 ASVVNAC-KEKGLIIGRNG 415 (452)
T ss_dssp HHHHHHH-HHTTEECEECT
T ss_pred HHHHHHH-HHCCcEEeecC
Confidence 3565546 46799998766
No 161
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=86.19 E-value=0.95 Score=37.27 Aligned_cols=108 Identities=22% Similarity=0.191 Sum_probs=59.5
Q ss_pred CcccccccCCCCcc-cccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVG-ERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~Yg-eRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||- | .|+|++.+ +++.++.+.. ...-.+|+.+| .++......|.. + .+ +.+.++
T Consensus 291 sK~l~~-------G~~~~G~v~~---~~~~~~~l~~---~~~~~t~~~~~-~~~aaa~aal~~--~----~~--~~~~~~ 348 (439)
T 2oat_A 291 GKALSG-------GLYPVSAVLC---DDDIMLTIKP---GEHGSTYGGNP-LGCRVAIAALEV--L----EE--ENLAEN 348 (439)
T ss_dssp CGGGGT-------TSSCCEEEEE---CHHHHTTSCT---TSSCCSSTTCH-HHHHHHHHHHHH--H----HH--TTHHHH
T ss_pred cccccC-------CCCCeEEEEE---CHHHHhccCC---CCcccCCCcCH-HHHHHHHHHHHH--H----hh--hhHHHH
Confidence 666654 5 68887654 3444433321 01124555444 344444444431 1 11 145677
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccc--cccccceeecCC------CHHHHHHHhhhccceeeeCC
Q psy16706 81 IISMRQSLKDNLQKEGSNKPWNHI--TDQIGMFCYTGL------NATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 81 i~~~R~~L~~~l~~~~~~~~w~~i--~~q~GmF~~~gl------~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.++++.|.+.|++.+. ..+ ....|+|..+-+ +.+++..+|. +++|++.+.
T Consensus 349 ~~~~~~~l~~~L~~l~~----~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~-~~Gv~v~~~ 407 (439)
T 2oat_A 349 ADKLGIILRNELMKLPS----DVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPT 407 (439)
T ss_dssp HHHHHHHHHHHHTTSCT----TTEEEEEEETTEEEEEECCCSSCCHHHHHHHHH-HTTEECCBS
T ss_pred HHHHHHHHHHHHHHhcC----CCcEEEEeeeeEEEEEEecCccHHHHHHHHHHH-HCCeEEecC
Confidence 77888888888887642 222 234566655533 3677877685 579998874
No 162
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=86.15 E-value=11 Score=29.53 Aligned_cols=60 Identities=7% Similarity=0.170 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc--c---c-cccceeec-------CCCHHHHHHHhhhccceeeeC
Q psy16706 71 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI--T---D-QIGMFCYT-------GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 71 ~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i--~---~-q~GmF~~~-------gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
.+.++...++...+++.|.+.|.+.+ +... + . ..|+|..+ +.+.+++.++| .+++|++.+
T Consensus 256 l~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l-~~~gi~v~~ 328 (393)
T 1mdo_A 256 LQKLDALNARRAAIAAQYHQAMADLP----FQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASL-KTKGIGTGL 328 (393)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHTSS----CEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHH-HHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC----cccccCCCCCCCceeEEEEEEecccccccCHHHHHHHH-HhCCCCccc
Confidence 34455666666677888888887653 3322 1 1 23343332 35778888867 567998865
No 163
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=85.55 E-value=3.9 Score=33.23 Aligned_cols=55 Identities=20% Similarity=0.237 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccee---e-cCCCHHHHHHHhhhccceee
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFC---Y-TGLNATQVRRKLIHDRSLKL 133 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~---~-~gl~~~qv~~~L~~~~~Iyl 133 (142)
++.+.+++...++.|.+.|++. +| +..+... .+|. + ++.+.+++.++|. +++|.+
T Consensus 342 ~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~-~~gi~v 400 (438)
T 1wyu_A 342 LREVALKSVEMAHKLHALLLEV--PG-VRPFTPK-PFFNEFALALPKDPEAVRRALA-ERGFHG 400 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS--TT-CEECSCS-SBCSEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CC-eEECCCC-CeEEEEEEeCCCCHHHHHHHHH-HCCcee
Confidence 6778888988899999999875 11 5444332 3432 2 2457888888785 569988
No 164
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=84.26 E-value=6.8 Score=30.72 Aligned_cols=58 Identities=7% Similarity=-0.064 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc------ccccceeecCC------CHHHHHHHhhhccceeeeC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT------DQIGMFCYTGL------NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~------~q~GmF~~~gl------~~~qv~~~L~~~~~Iyl~~ 135 (142)
++.+.+++++.++.|.+.|++. |+ +..+. ...|+|..+-+ +.+++..+|. +++|++.+
T Consensus 252 l~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~ 321 (388)
T 1b9h_A 252 LDEQIAVRDERWTLLSRLLGAI--DG-VVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLV-EAGLPAFA 321 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS--TT-CEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHH-HTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CC-ccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHH-HCCCCccc
Confidence 4446667777788888888864 22 44443 24467766644 3556776684 57998853
No 165
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=84.64 E-value=0.2 Score=42.75 Aligned_cols=17 Identities=6% Similarity=0.065 Sum_probs=11.5
Q ss_pred HHHHHhhhccceeeeCCC
Q psy16706 120 QVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 120 qv~~~L~~~~~Iyl~~~G 137 (142)
++..+|. +.+|++.+.+
T Consensus 417 ~~~~~ll-~~GV~v~p~~ 433 (465)
T 2yky_A 417 LFFFHML-RKGIYLAPRG 433 (465)
Confidence 4555464 6899988765
No 166
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=84.11 E-value=0.91 Score=37.08 Aligned_cols=50 Identities=14% Similarity=0.054 Sum_probs=28.0
Q ss_pred CcccccccCCCCccc-ccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCC
Q psy16706 2 KKNYGIHFTCLPVGE-RVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGD 63 (142)
Q Consensus 2 SKnfgL~~~~~~Yge-RvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~d 63 (142)
||.||. .|. |.|++. +++++..+.+.. ..+..-..++...+.++...|.+
T Consensus 212 sK~~~g------~~~~~~G~v~--~~~~~l~~~l~~----~~~~~g~~~~~~~~~~~~~~l~~ 262 (403)
T 3cog_A 212 TKYMNG------HSDVVMGLVS--VNCESLHNRLRF----LQNSLGAVPSPIDCYLCNRGLKT 262 (403)
T ss_dssp TTTTTC------SSCCCCEEEE--ECCHHHHHHHHH----HHHHHCCCCCHHHHHHHHHHHTT
T ss_pred hhhccC------CCCCeEEEEE--ECcHHHHHHHHH----HHHhcCCCCCHHHHHHHHhhhhH
Confidence 788888 777 577543 456665555433 22322233444566666666654
No 167
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=84.11 E-value=5.6 Score=31.77 Aligned_cols=110 Identities=13% Similarity=0.078 Sum_probs=49.3
Q ss_pred cccccceeEEEeCCHHHHHHHHHHHHHHHHhhcC-CCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH----HHHH
Q psy16706 14 VGERVGAFSIVSADKDEAARILSQLKILIRAFYS-SPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISM----RQSL 88 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S-~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~----R~~L 88 (142)
-|-|+|.+.. +++.++.+.. .. ..++ ++|...+..+...|.+-+ .+ .++...++.... |+.|
T Consensus 211 ~g~~~G~~~~---~~~~~~~l~~----~~-~~~~~~~~~~~~~a~~~al~~~~--~~---~~~~~~~~~~~~~~~~~~~l 277 (374)
T 2aeu_A 211 EGPRGGLLAG---KKELVDKIYI----EG-TKFGLEAQPPLLAGIYRALKNFN--LE---RIRKAFERAKNFDLSKIEKL 277 (374)
T ss_dssp SSCSCEEEEE---EHHHHHHHHH----HH-HTTTCBCCHHHHHHHHHHHHHCC--HH---HHHHHHHHHHHCCCHHHHHH
T ss_pred cCcceEEEEE---CHHHHHHHHH----hh-ccccCCCCHHHHHHHHHHHHHHh--HH---HHHHHHHHHHHHHHHHHHHH
Confidence 5678887443 3455544433 22 2232 455556666666665321 11 111112222222 4444
Q ss_pred HHHHHhcCCCCCCccccccccceeec-CCCHH-------HHHHHhhhccceeeeCC
Q psy16706 89 KDNLQKEGSNKPWNHITDQIGMFCYT-GLNAT-------QVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 89 ~~~l~~~~~~~~w~~i~~q~GmF~~~-gl~~~-------qv~~~L~~~~~Iyl~~~ 136 (142)
.+.|........|...+...|+|... .+.+. ++..+|.++++|.+.+.
T Consensus 278 ~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g 333 (374)
T 2aeu_A 278 NKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITV 333 (374)
T ss_dssp HHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTT
T ss_pred HHhhhhhhhccCcceeeCCceEEEEeecccccccccchHHHHHHHHHhCCEEEecC
Confidence 44444321001255444555655333 34321 13323667899998764
No 168
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=83.73 E-value=9.3 Score=29.27 Aligned_cols=48 Identities=17% Similarity=0.123 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCCCCCCcc-ccccccceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 84 MRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 84 ~R~~L~~~l~~~~~~~~w~~-i~~q~GmF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
.|+.+.+.|++.+ +.. .....|.|.++ +.+.+++.++| .+++|.+.+.
T Consensus 261 ~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~ 314 (347)
T 1jg8_A 261 NARFLALKLKEIG----YSVNPEDVKTNMVILRTDNLKVNAHGFIEAL-RNSGVLANAV 314 (347)
T ss_dssp HHHHHHHHHHHHT----CBCCGGGCCSSEEEEECTTSSSCHHHHHHHH-HHHTEECEEE
T ss_pred HHHHHHHHHHhcC----ceeccCCCcceEEEEEcccccCCHHHHHHHH-HHCCCEEecC
Confidence 4566667776653 332 22234444443 24577887778 4689988753
No 169
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=83.30 E-value=0.73 Score=38.56 Aligned_cols=114 Identities=15% Similarity=0.197 Sum_probs=54.8
Q ss_pred CcccccccCCCCcc-cccceeEEEeCCHHHHHHHHHHH---H-HHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVG-ERVGAFSIVSADKDEAARILSQL---K-ILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKG 76 (142)
Q Consensus 2 SKnfgL~~~~~~Yg-eRvGal~vv~~~~~~~~~v~sql---~-~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~ 76 (142)
||.+|- | .|+|++.+ +++..+.+...- . ...-.+|+.+|. ++......|.. +. + +.
T Consensus 290 sK~l~~-------G~~plg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~np~-a~aAa~aaL~~--~~-----~-~~ 350 (476)
T 3i5t_A 290 AKGVTS-------GYVPLGGLAI---SEAVLARISGENAKGSWFTNGYTYSNQPV-ACAAALANIEL--ME-----R-EG 350 (476)
T ss_dssp CGGGGT-------TSSCCEEEEE---CHHHHHTTSGGGCTTCEECCCCTTTTCHH-HHHHHHHHHHH--HH-----H-TT
T ss_pred hhhhcC-------CCcCeEEEEE---CHHHHHHHhcCCcccccccccCCCCcCHH-HHHHHHHHHHH--HH-----h-HH
Confidence 566654 6 78887654 555544433210 0 012256666664 33333333321 10 1 23
Q ss_pred HHHHHHHHHHHHHHHHHhcC-CCCCCccccccccceeecCC--C-------------HHHHHHHhhhccceeeeCCC
Q psy16706 77 MADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTGL--N-------------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~-~~~~w~~i~~q~GmF~~~gl--~-------------~~qv~~~L~~~~~Iyl~~~G 137 (142)
+.+++..+.+.+.+.|++++ .|. .. .....|+|..+-+ + ..++..+|. +.+|++.+.|
T Consensus 351 ~~~~~~~~~~~l~~~L~~l~~~~~-v~-~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g 424 (476)
T 3i5t_A 351 IVDQAREMADYFAAALASLRDLPG-VA-ETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCF-ELGLIVRPLG 424 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSTT-EE-EEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHH-HTTEECEEET
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-eE-EEEecCceeEEEEecCccccccccchhHHHHHHHHHHH-HCCCEEEecC
Confidence 44455555555555665443 121 12 2335666654432 1 345656574 5699988765
No 170
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=83.00 E-value=14 Score=31.47 Aligned_cols=64 Identities=14% Similarity=0.259 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--ccc-ceeec---CCCHHHHHHHhhhccceeeeC
Q psy16706 67 KSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIG-MFCYT---GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 67 ~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~--q~G-mF~~~---gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
+..+..+.+++.+++...++.|.+.|++.| |..+.. ..- ++.-+ |++.+++...| ++.+|++.+
T Consensus 326 ~~~~~~~~~~~~~~~~~na~~L~~~L~~~G----~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L-~~~GI~v~~ 395 (490)
T 2a7v_A 326 KQACTPMFREYSLQVLKNARAMADALLERG----YSLVSGGTDNHLVLVDLRPKGLDGARAERVL-ELVSITANK 395 (490)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTTTCCHHHHHHHH-HHTTEECEE
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHcC----cEEecCCCCCeEEEEEeCCCCCCHHHHHHHH-HhCCeEEec
Confidence 344445667778888888888889998875 554431 111 12222 56788888856 688999864
No 171
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=82.92 E-value=1.2 Score=36.35 Aligned_cols=57 Identities=5% Similarity=0.052 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccc--cccccceeecCCC---------HHHHHHHhhhccceeeeCCC
Q psy16706 77 MADRIISMRQSLKDNLQKEGSNKPWNHI--TDQIGMFCYTGLN---------ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~~~~~w~~i--~~q~GmF~~~gl~---------~~qv~~~L~~~~~Iyl~~~G 137 (142)
+.+++.++++.+.+.|++.+ .+..+ ....|+|..+-+. +.++..+|. +.+|++.+.|
T Consensus 350 ~~~~~~~~~~~l~~~L~~l~---~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g 417 (449)
T 3a8u_X 350 LVQSVAEVAPHFEKALHGIK---GAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFGG 417 (449)
T ss_dssp HHHHHHHHHHHHHHHHHTTT---TSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEET
T ss_pred HHHHHHHHHHHHHHHHHHHh---cCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecCC
Confidence 45666667777777777643 12222 2346777665442 225666685 5699987643
No 172
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=82.91 E-value=0.83 Score=37.77 Aligned_cols=113 Identities=9% Similarity=0.078 Sum_probs=52.5
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||. |.|+|++.+ +++.++.+.. ...-.+|+.+|. ++......|..-+ ...+.+++....+
T Consensus 293 sK~~~~-------G~~~G~~~~---~~~i~~~~~~---~~~~~t~~~~~~-~~aaa~aal~~~~-~~~~~~~~~~~~~-- 355 (453)
T 4ffc_A 293 AKGIAG-------GMPLSAVTG---RAELMDAVYA---GGLGGTYGGNPV-TCAAAVAALGVMR-ELDLPARARAIEA-- 355 (453)
T ss_dssp CGGGGT-------TSSCEEEEE---EHHHHTTSCT---TSSCCSSSSCHH-HHHHHHHHHHHHH-HTTHHHHHHHHHH--
T ss_pred hhhhcC-------CcCeEEEEE---CHHHHhhhcc---cCcCCCCCcCHH-HHHHHHHHHHHhh-hhhHHHHHHHHHH--
Confidence 677766 789998633 4444443321 112356665553 3333333333100 1123333333322
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----------CHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----------NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-----------~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+|+.|.+.+.+.. . +.. ....|+|..+-+ ...++..+| .+++|++.+.|
T Consensus 356 -~l~~~l~~~~~~~~--~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~ 416 (453)
T 4ffc_A 356 -SVTSRLSALAEEVD--I-IGE-VRGRGAMLAIEIVKPGTLEPDAALTKSIAAEA-LSQGVLILTCG 416 (453)
T ss_dssp -HHHHHHHHHHHHCS--S-EEE-EEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECCEEC
T ss_pred -HHHHHHHHHHhhCC--C-eEE-EEeeceEEEEEEecCcccCCCHHHHHHHHHHH-HhCCCEEecCC
Confidence 23333333333322 1 222 334566665533 145566646 56799987654
No 173
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=82.71 E-value=1.9 Score=35.77 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHhcC-CCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeCCC
Q psy16706 78 ADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 78 ~~ri~~~R~~L~~~l~~~~-~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~G 137 (142)
.+++.++++.|.+.|++.. .|+ ... ....|+|..+-+ +..++.++|. +.+|.+.+.|
T Consensus 362 ~~~~~~~~~~l~~~L~~l~~~~~-v~~-vr~~G~~~~i~l~~~~~~~~~~~~l~-~~Gv~v~~~~ 423 (457)
T 3tfu_A 362 RTRITELAAGLTAGLDTARALPA-VTD-VRVCGAIGVIECDRPVDLAVATPAAL-DRGVWLRPFR 423 (457)
T ss_dssp HHHHHHHHHHHHHHHGGGGGSTT-EEE-EEECSSCEEEEESSCCCHHHHHHHHH-HTTEECCCBT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-eee-eecCCeEEEEEECCcccHHHHHHHHH-HCCeEEEecC
Confidence 4444445555555665543 121 222 234677766533 4677877685 5699988765
No 174
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=81.87 E-value=0.26 Score=39.35 Aligned_cols=109 Identities=14% Similarity=0.190 Sum_probs=57.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHH-HHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKIL-IRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~-~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.||- |.|+|++.+ +++ .+ . +... ...+|+. +..++..+...|..-+ + +.+.++
T Consensus 251 sK~~~~-------G~r~G~~~~--~~~-~~-~----l~~~~~~~~~~~-~~~~~~a~~~~l~~~~-------~-~~~~~~ 306 (397)
T 2ord_A 251 AKGLGG-------GVPIGAVIV--NER-AN-V----LEPGDHGTTFGG-NPLACRAGVTVIKELT-------K-EGFLEE 306 (397)
T ss_dssp CGGGGT-------TSCCEEEEE--CST-TC-C----CCTTSSCCSSTT-CHHHHHHHHHHHHHHT-------S-TTHHHH
T ss_pred ccccCC-------CcCeEEEEE--chH-hc-c----cCCCCcCCCCCC-CHHHHHHHHHHHHHHH-------h-CCHHHH
Confidence 676653 679998654 332 22 2 2211 1234543 3345555555554211 1 245666
Q ss_pred HHHHHHHHHHHHHhc--CCCCCCccccccccceeecCC----CHHHHHHHhhhccceeeeCCC
Q psy16706 81 IISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL----NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 81 i~~~R~~L~~~l~~~--~~~~~w~~i~~q~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~~G 137 (142)
+++.|+.|.+.|++. +.+. +... ...|.|..+-+ +.+++.++|. +++|++.+.|
T Consensus 307 ~~~~~~~l~~~L~~~~~~~~~-~~~~-~~~g~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~ 366 (397)
T 2ord_A 307 VEEKGNYLMKKLQEMKEEYDV-VADV-RGMGLMIGIQFREEVSNREVATKCF-ENKLLVVPAG 366 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-EEEE-EEETTEEEEEECTTSCHHHHHHHHH-HTTEECEEET
T ss_pred HHHHHHHHHHHHHHHHHhCCc-eEEE-EEEeEEEEEEECChHHHHHHHHHHH-HCCCEEccCC
Confidence 777777777777664 2221 1112 23466655533 4677777685 4899987643
No 175
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=80.61 E-value=1.4 Score=36.35 Aligned_cols=113 Identities=10% Similarity=0.030 Sum_probs=52.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||. |.|+|++.. +++.++.+.. ...-.+|+.+|. ++..+...|..-+ ...+.+++.. +.
T Consensus 295 sK~l~~-------G~~iG~v~~---~~~~~~~~~~---~~~~~t~~~~~~-~~aaa~aal~~~~-~~~~~~~~~~---~~ 356 (451)
T 3oks_A 295 AKGIAG-------GLPLSAVTG---RAEIMDSPHV---SGLGGTYGGNPI-ACAAALATIETIE-SEGLVARAQQ---IE 356 (451)
T ss_dssp CGGGGT-------TSSCEEEEE---EHHHHTCSCT---TSBCCSSSSCHH-HHHHHHHHHHHHH-HTTHHHHHHH---HH
T ss_pred hhhhhC-------CcceEEEEE---CHHHHhhhcC---CCcCCCCCCCHH-HHHHHHHHHHHHh-hhhHHHHHHH---HH
Confidence 677766 789997533 4444444321 113456665553 3433333333100 0123333322 22
Q ss_pred HHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----------CHHHHHHHhhhccceeeeCCC
Q psy16706 82 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----------NATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 82 ~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl-----------~~~qv~~~L~~~~~Iyl~~~G 137 (142)
..+|+.|.+.+.+.. . +. .....|+|..+-+ ...++.++| .+++|.+.+.|
T Consensus 357 ~~l~~~L~~~~~~~~--~-~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~ 418 (451)
T 3oks_A 357 KIMKDRLGRLQAEDD--R-IG-DVRGRGAMIAMELVKAGTTEPDADLTKALCAGA-HAAGVIVLSCG 418 (451)
T ss_dssp HHHHHHHHHHHHHCT--T-EE-EEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHH-HHTTEECEEEC
T ss_pred HHHHHHHHHHHhhCC--C-eE-EEEEeeEEEEEEEecCccCCCCHHHHHHHHHHH-HhCCcEEecCC
Confidence 233333333333322 1 22 2334566655533 145566656 56799987754
No 176
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=79.63 E-value=21 Score=28.12 Aligned_cols=25 Identities=28% Similarity=0.288 Sum_probs=16.1
Q ss_pred ccceeecCC--CHHHHHHHhhhccceeee
Q psy16706 108 IGMFCYTGL--NATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 108 ~GmF~~~gl--~~~qv~~~L~~~~~Iyl~ 134 (142)
.|||++. + ..+++...| ++.+|++.
T Consensus 297 ~~~~~~~-~~~~~~~~~~~l-~~~gi~~~ 323 (386)
T 1cs1_A 297 GAMLSFE-LDGDEQTLRRFL-GGLSLFTL 323 (386)
T ss_dssp CSEEEEE-ESSCHHHHHHHH-HTCSSSEE
T ss_pred ceEEEEE-ECCCHHHHHHHH-HhCCcceE
Confidence 5665543 3 267777746 67899875
No 177
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=79.18 E-value=3.2 Score=21.81 Aligned_cols=21 Identities=19% Similarity=0.542 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy16706 69 QWLTEVKGMADRIISMRQSLK 89 (142)
Q Consensus 69 ~W~~El~~m~~ri~~~R~~L~ 89 (142)
+..+||+.+.+|+.+.|.+|.
T Consensus 5 elykeledlqerlrklrkklr 25 (27)
T 3twe_A 5 ELYKELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 457899999999999998775
No 178
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=79.04 E-value=9.3 Score=30.02 Aligned_cols=60 Identities=13% Similarity=0.073 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc------ccc--ceeec-----CCCHHHHHHHhhhccceeeeCC
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD------QIG--MFCYT-----GLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~------q~G--mF~~~-----gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+.++.+.++.+++++.+.+.|++.+ +..... ..+ +|... |.+.+++..+| .+.+|++.+.
T Consensus 265 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L-~~~GI~v~~~ 337 (391)
T 3dr4_A 265 ERVDEHLAARERVVGWYEQKLARLG----NRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDL-DALGIESRPV 337 (391)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHGGGT----TSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHH-HHTTCCCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC----ccccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHH-HHCCCceeec
Confidence 3445566777777777888887763 333322 122 23322 45688888878 5669988743
No 179
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=78.67 E-value=1.9 Score=35.25 Aligned_cols=103 Identities=20% Similarity=0.250 Sum_probs=51.9
Q ss_pred c-cccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 15 G-ERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQ 93 (142)
Q Consensus 15 g-eRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~ 93 (142)
| .|+|++.+ +++.++.+.. .....+|+.+| .++......|.. +.+ +.+.+++.++++.|.+.|+
T Consensus 286 G~~~~G~v~~---~~~~~~~l~~---~~~~~t~~~~~-~~~aaa~aal~~--~~~------~~~~~~~~~~~~~l~~~L~ 350 (433)
T 1z7d_A 286 GHYPISAVLA---NDDIMLVIKP---GEHGSTYGGNP-LAASICVEALNV--LIN------EKLCENAEKLGGPFLENLK 350 (433)
T ss_dssp TSSCCEEEEE---CHHHHTTCCT---TCCCCTTTTCH-HHHHHHHHHHHH--HHH------TTHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEE---CHHHHhhhcc---ccccccCCCCH-HHHHHHHHHHHH--HHh------ccHHHHHHHHHHHHHHHHH
Confidence 5 68887654 3444433321 01234555444 344444444431 111 1345556666666666666
Q ss_pred hc--CCCCCCccccccccceeecCC-----CHHHHHHHhhhccceeeeC
Q psy16706 94 KE--GSNKPWNHITDQIGMFCYTGL-----NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 94 ~~--~~~~~w~~i~~q~GmF~~~gl-----~~~qv~~~L~~~~~Iyl~~ 135 (142)
+. +.|.. .. ....|+|..+-+ +.+++..+|. +.+|++.+
T Consensus 351 ~l~~~~~~~-~~-~~~~g~~~~i~~~~~~~~~~~~~~~l~-~~Gv~v~~ 396 (433)
T 1z7d_A 351 RELKDSKIV-RD-VRGKGLLCAIEFKNELVNVLDICLKLK-ENGLITRD 396 (433)
T ss_dssp HHHTTCTTE-EE-EEEETTEEEEEECTTTCCHHHHHHHHH-HTTEECCE
T ss_pred HHHHhCCCe-EE-EEeeeeEEEEEEccChhHHHHHHHHHH-HCCeEEec
Confidence 54 43321 11 234566655533 3567777685 57999876
No 180
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=78.49 E-value=8.4 Score=30.66 Aligned_cols=51 Identities=8% Similarity=0.006 Sum_probs=27.4
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhh-cCCCCchHHHHHHHHhCC
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAF-YSSPPIHGARIVQEILGD 63 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~-~S~pp~~Ga~iv~~IL~d 63 (142)
||.||. .|.|+|...++ + ++..+ ..+....... -.+++..++..+...|.+
T Consensus 209 sK~~~~------~g~~~~G~~~~-~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (398)
T 2rfv_A 209 TKYING------HGDVIGGIIVG-K-QEFID---QARFVGLKDITGGCMSPFNAWLTLRGVKT 260 (398)
T ss_dssp TTTTTC------SSCCCCEEEEE-C-HHHHH---HHHHTHHHHTTCCCCCHHHHHHHHHHHTT
T ss_pred cccccC------CCCceEEEEEE-C-HHHHH---HHHHHHHHhCCCCCCCHHHHHHHHhhhhh
Confidence 799999 99999444333 2 33332 1233333322 234555666666666754
No 181
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=77.57 E-value=1.3 Score=36.18 Aligned_cols=18 Identities=11% Similarity=0.084 Sum_probs=12.4
Q ss_pred HHHHHHhhhccceeeeCCC
Q psy16706 119 TQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 119 ~qv~~~L~~~~~Iyl~~~G 137 (142)
.++.++|. +.+|.+.+.|
T Consensus 396 ~~~~~~l~-~~Gv~~~~~~ 413 (448)
T 3dod_A 396 YKVSLKMR-ELGMLTRPLG 413 (448)
T ss_dssp HHHHHHHH-HTTEECCEET
T ss_pred HHHHHHHH-HCCcEEeccC
Confidence 56666574 5699987654
No 182
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=77.07 E-value=20 Score=28.75 Aligned_cols=18 Identities=17% Similarity=0.065 Sum_probs=15.5
Q ss_pred CcccccccCCCCcccccceeEEEe
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVS 25 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~ 25 (142)
||.||. .|.|+|.+.+..
T Consensus 201 ~K~~~~------~~~~~G~~~~~~ 218 (412)
T 2cb1_A 201 TKWASG------HGSVLGGAVLSR 218 (412)
T ss_dssp TTTTTC------SSCCCCEEEEEC
T ss_pred cccccC------CCCcEEEEEEec
Confidence 788988 999999988765
No 183
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=76.02 E-value=6.4 Score=30.82 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=48.5
Q ss_pred cCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cceeec--CCCHH
Q psy16706 46 YSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCYT--GLNAT 119 (142)
Q Consensus 46 ~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~----GmF~~~--gl~~~ 119 (142)
.++++..++.-+...+. .+.+.++.+.+++++.|+.|.+.|+ .++ +..+..+. +++.+. +.+.+
T Consensus 260 ~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~l~~~L~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (400)
T 3vax_A 260 PGTLPVPLIMGLAEAAK------IFEAEHAQWQVAAQDLRSRLLAGLA---STS-FQVNGDQDHVVPHILNLSFEDVDAE 329 (400)
T ss_dssp CSCCCHHHHHHHHHHHH------HHHHSHHHHHHHHHHHHHHHHHHHT---TTT-CEECSCTTSBCTTEEEEECTTCCHH
T ss_pred cCCCCHHHHHHHHHHHH------HHHhhHHHHHHHHHHHHHHHHHhhC---CCC-EEEeCCcccCCCCEEEEEeCCCCHH
Confidence 44455454443433332 2234477888999999999999887 222 55555443 344433 56788
Q ss_pred HHHHHhhhccceeeeC
Q psy16706 120 QVRRKLIHDRSLKLSN 135 (142)
Q Consensus 120 qv~~~L~~~~~Iyl~~ 135 (142)
++.+.|. ++|++.+
T Consensus 330 ~l~~~L~--~gi~v~~ 343 (400)
T 3vax_A 330 AFLVTLK--DLVAVAT 343 (400)
T ss_dssp HHHHHHH--HHHHHTT
T ss_pred HHHHHHh--cCcEEEe
Confidence 8888684 8887765
No 184
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=76.00 E-value=13 Score=29.37 Aligned_cols=78 Identities=8% Similarity=0.091 Sum_probs=43.7
Q ss_pred CCCchHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc---cc-ceeecCCCHHH-H
Q psy16706 48 SPPIHGARIVQEILGDPKLKSQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IG-MFCYTGLNATQ-V 121 (142)
Q Consensus 48 ~pp~~Ga~iv~~IL~dp~L~~~W~~E-l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q---~G-mF~~~gl~~~q-v 121 (142)
+||..++.-+...|. ...++ ++.+.+|...+++.|.+.|++.| +..+... .+ +..+.+-+++. .
T Consensus 252 t~~~~~~~a~~aal~------~~~~~g~~~~~~~~~~l~~~l~~~l~~~g----~~~~~~~~~~~~~i~~~~~~~~~~~~ 321 (379)
T 3ke3_A 252 TMPTDSLRQFRDAIL------EAKEIGFDILRDAQWELGNRVRKVLTDKG----IESVAAEGFEAPGVVVSYTERDDMHK 321 (379)
T ss_dssp CCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSBCTTCBCSSEEEEECSCHHHHS
T ss_pred CCCHHHHHHHHHHHH------HHHHhcHHHHHHHHHHHHHHHHHHHHHcC----CEecCCccccCceEEEEccCCcchHH
Confidence 666565554443332 12233 67888899998999999998876 4433322 33 22222223332 1
Q ss_pred HHHhhhccceeeeCC
Q psy16706 122 RRKLIHDRSLKLSNV 136 (142)
Q Consensus 122 ~~~L~~~~~Iyl~~~ 136 (142)
...| .+++|++.+.
T Consensus 322 ~~~L-~~~Gi~v~~g 335 (379)
T 3ke3_A 322 GSAF-AEAGLQIAAG 335 (379)
T ss_dssp SHHH-HHTTCCCEEC
T ss_pred HHHH-HHCCeEEeCC
Confidence 3336 5779987653
No 185
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=75.59 E-value=24 Score=29.07 Aligned_cols=76 Identities=12% Similarity=-0.082 Sum_probs=40.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHH-HHhhcCCCCchH-HHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKIL-IRAFYSSPPIHG-ARIVQEILGDPKLKSQWLTEVKGMAD 79 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~-~R~~~S~pp~~G-a~iv~~IL~dp~L~~~W~~El~~m~~ 79 (142)
||+||. .|...|..++. +++.++.+...+... .. .+.+|..+ +..+.. -...+....+
T Consensus 226 sK~lgg------~~~~~GG~v~~--~~~li~~l~~~~~~~~~g--~~~g~~~~~~~~~l~----------gl~~~~~r~~ 285 (409)
T 3jzl_A 226 IKNPGG------GLAKTGGYIAG--KEALVDLCGYRLTTPGIG--REAGASLYSLLEMYQ----------GFFLAPHVTA 285 (409)
T ss_dssp TSGGGT------TTCSSCEEEEE--CHHHHHHHHHHHSCTTTG--GGCCCCTTCHHHHHH----------HHHHHHHHHH
T ss_pred cccCCc------cCCceEEEEEe--CHHHHHHHHHHhcccccc--ccccccHHHHHHHHH----------HHhhHHHHHH
Confidence 799998 88777766543 456555544322110 11 12222222 222211 2234445566
Q ss_pred HHHHHHHHHHHHHHhcCC
Q psy16706 80 RIISMRQSLKDNLQKEGS 97 (142)
Q Consensus 80 ri~~~R~~L~~~l~~~~~ 97 (142)
+..+.+..|.+.|++++.
T Consensus 286 ~~~~~a~~la~~L~~~g~ 303 (409)
T 3jzl_A 286 QAIKGARFTAAMLAEFGV 303 (409)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 666667777788888763
No 186
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=74.49 E-value=23 Score=28.73 Aligned_cols=74 Identities=12% Similarity=0.039 Sum_probs=41.1
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRI 81 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri 81 (142)
||.||- .|.++|.+.+++.+++..+.+.. ..+..=..++...+.++...|.. +....++.
T Consensus 212 sK~l~g------~g~~~gG~~vv~~~~~~~~~l~~----~~~~~g~~~~~~~a~~~l~~l~~----------l~~r~~~~ 271 (400)
T 3nmy_A 212 TKYLNG------HSDMVGGIAVVGDNAELAEQMAF----LQNSIGGVQGPFDSFLALRGLKT----------LPLRMRAH 271 (400)
T ss_dssp TTTTTC------SSSCCCEEEEECSCHHHHHHHHH----HHHHHCCBCCHHHHHHHHHHHTT----------HHHHHHHH
T ss_pred ccccCC------CCCcceeEEEEeCCHHHHHHHHH----HHHhcCCCCCHHHHHHHHHhHhH----------HHHHHHHH
Confidence 688888 88999996677778766665543 33322233333444444444432 22223344
Q ss_pred HHHHHHHHHHHHhc
Q psy16706 82 ISMRQSLKDNLQKE 95 (142)
Q Consensus 82 ~~~R~~L~~~l~~~ 95 (142)
.+....+.+.|++.
T Consensus 272 ~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 272 CENALALAQWLETH 285 (400)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcC
Confidence 44555666666543
No 187
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=74.41 E-value=22 Score=28.07 Aligned_cols=22 Identities=9% Similarity=-0.025 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q psy16706 74 VKGMADRIISMRQSLKDNLQKE 95 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~ 95 (142)
++.+.+++...++.+.+.|++.
T Consensus 245 l~~~~~~~~~~~~~l~~~L~~~ 266 (394)
T 1o69_A 245 LEQRVLKKREIYEWYKEFLGEY 266 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 3346677778888888888653
No 188
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=73.61 E-value=13 Score=29.56 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=16.4
Q ss_pred cccceeecCCC--HHHHHHHhhhccceeeeC
Q psy16706 107 QIGMFCYTGLN--ATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 107 q~GmF~~~gl~--~~qv~~~L~~~~~Iyl~~ 135 (142)
..||+++ .+. ++++.. +.++.+|+...
T Consensus 310 ~~~~~~~-~l~~~~~~~~~-~l~~~~i~~~~ 338 (398)
T 1gc0_A 310 PGGMIAF-ELKGGIGAGRR-FMNALQLFSRA 338 (398)
T ss_dssp CTTEEEE-EETTHHHHHHH-HHHHCSSSEEC
T ss_pred CceEEEE-EECCCHHHHHH-HHHhCCCceec
Confidence 4566665 342 456776 55778877643
No 189
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=72.72 E-value=12 Score=28.96 Aligned_cols=60 Identities=5% Similarity=0.022 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc----cccc--eeecCCCHHHHHHHhhhccceeeeCC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIGM--FCYTGLNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~----q~Gm--F~~~gl~~~qv~~~L~~~~~Iyl~~~ 136 (142)
++.+.++...+++.+.+.|++.+. .+..... ..++ |....-+.+++.++| .+.+|++.+.
T Consensus 247 ~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gi~v~~~ 312 (374)
T 3uwc_A 247 LETITEKRRGIAHLYDQSFVDLSE--FIDVPVRREGVYHVFHIYVLRVKYRDQLFQYL-KDNGIEVKIH 312 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTT--TEECCCCCTTEECCCSSEEEEETTHHHHHHHH-HHTTBCCBCS
T ss_pred HHHHHHHHHHHHHHHHHHhccCCC--eEEeccCCCCCceeeEEEEEEcCCHHHHHHHH-HHCCCccccC
Confidence 344556666667777777766541 0222111 1121 222233778888868 5679987654
No 190
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=72.01 E-value=3.2 Score=29.11 Aligned_cols=35 Identities=11% Similarity=0.203 Sum_probs=28.5
Q ss_pred CcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcC
Q psy16706 13 PVGERVGAFSIVSADKDEAARILSQLKILIRAFYS 47 (142)
Q Consensus 13 ~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S 47 (142)
+|+.+...|.+|++|+++++.....|..+++..-+
T Consensus 91 iy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~~~ 125 (131)
T 1mai_A 91 VFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHSGS 125 (131)
T ss_dssp EESSSCCCEEEECSSHHHHHHHHHHHHHHHC----
T ss_pred EECCCCceEEEEeCCHHHHHHHHHHHHHHHHhhhh
Confidence 69998899999999999999999989888765433
No 191
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=71.13 E-value=8.9 Score=29.59 Aligned_cols=57 Identities=5% Similarity=0.060 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-----ccccee--ecC---C-CHHHHHHHhhhccceeee
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-----QIGMFC--YTG---L-NATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~-----q~GmF~--~~g---l-~~~qv~~~L~~~~~Iyl~ 134 (142)
++.+.+++.+.++.|.+.|++. |+ +..... ..+++. .++ + +.+++..+| .+++|++.
T Consensus 246 ~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gi~v~ 313 (375)
T 2fnu_A 246 APFLMQKREEAALTYDRIFKDN--PY-FTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESL-HKRGILAQ 313 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC--SS-EEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHH-HHTTEECB
T ss_pred HHHHHHHHHHHHHHHHHHhhcC--CC-ccccCCCCCCCcceEEEEEEeCccccchHHHHHHHH-HHCCCCcc
Confidence 3456667777888888888764 22 444432 122221 223 3 677888768 57799887
No 192
>4g3b_A Alpha4F3D; alpha helix, de novo designed, fluorinated protein, coiled-C NOVO protein; HET: 6FL; 1.19A {Synthetic} PDB: 4g4l_A* 3twg_A*
Probab=69.32 E-value=8.1 Score=20.07 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy16706 68 SQWLTEVKGMADRIISMRQSLK 89 (142)
Q Consensus 68 ~~W~~El~~m~~ri~~~R~~L~ 89 (142)
.+..+||+...+|+.+.|.+|.
T Consensus 4 de~ykeled~qerlrk~rkklr 25 (26)
T 4g3b_A 4 DEXYKELEDXQERLRKXRKKLR 25 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhc
Confidence 3567899999999999988764
No 193
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=68.94 E-value=28 Score=27.89 Aligned_cols=28 Identities=14% Similarity=-0.024 Sum_probs=18.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILS 36 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~s 36 (142)
||.||. -|.|+|.+. ++++++..+.+..
T Consensus 202 sK~~g~------~G~rigG~~-~~~~~~~~~~l~~ 229 (393)
T 1n8p_A 202 TKYING------HSDVVLGVL-ATNNKPLYERLQF 229 (393)
T ss_dssp TTTTTC------SSCCCCEEE-EESCHHHHHHHHH
T ss_pred cccccC------CCCceeEEE-EeCCHHHHHHHHH
Confidence 799999 999995553 4455655555443
No 194
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=68.78 E-value=30 Score=27.82 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccc-----ccc--ceee-c----CCCHHHHHHHhhhccceeeeC
Q psy16706 77 MADRIISMRQSLKDNLQKEGSNKPWNHITD-----QIG--MFCY-T----GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~-----q~G--mF~~-~----gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
..++.+.+++.|.+.|++.. + +..++. ..+ .|.+ + |.+.+++..+| .+.+|++..
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~GI~v~~ 375 (437)
T 3bb8_A 309 FVEKRKANFKYLKDALQSCA--D-FIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFL-DEAKVGTRL 375 (437)
T ss_dssp HHHHHHHHHHHHHHHGGGGT--T-TEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHH-HHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHhhccC--C-ccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHH-HHCCCceec
Confidence 33333555666677776652 1 222221 113 2433 2 56888888878 567998754
No 195
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=66.04 E-value=22 Score=29.39 Aligned_cols=57 Identities=19% Similarity=0.250 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CCCHHHHHHHhhhccceee
Q psy16706 73 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNATQVRRKLIHDRSLKL 133 (142)
Q Consensus 73 El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~--gl~~~qv~~~L~~~~~Iyl 133 (142)
.++.+.+++.+.++.|.+.|++. ++ +..+....|++.+. +.+..++.++|. +++|++
T Consensus 374 ~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~Gi~v 432 (514)
T 3mad_A 374 GYLDATRRILQAADRLKAGVRAI--PS-LKILGDPLWVIAVASDELNIYQVMEEMA-GRGWRL 432 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTS--TT-CEESSCCSSEEEEECSSSCHHHHHHHHH-TTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC--CC-eEEeCCCeEEEEEeCCCCCHHHHHHHHH-hcCCEe
Confidence 35667788888888899999874 22 67777777877765 467888888784 568877
No 196
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=65.19 E-value=51 Score=26.26 Aligned_cols=71 Identities=17% Similarity=0.101 Sum_probs=36.5
Q ss_pred CcccccccCCCCccc-ccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGE-RVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKSQWLTEVKGMADR 80 (142)
Q Consensus 2 SKnfgL~~~~~~Yge-RvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~r 80 (142)
||.+|. .|. |.|++ ++++++..+.+. ...+..-..++...+.++...+.+ +....++
T Consensus 211 sK~lg~------~g~~~~G~v--~~~~~~~~~~l~----~~~~~~g~~~~~~~~~~~~~~l~~----------l~~~~~~ 268 (392)
T 3qhx_A 211 TKYIGG------HSDVVGGAL--VTNDEELDQSFA----FLQNGAGAVPGPFDAYLTMRGLKT----------LVLRMQR 268 (392)
T ss_dssp TTTTTC------SSCCCCEEE--EESCHHHHHHHH----HHHHHHCCCCCHHHHHHHHHHHTT----------HHHHHHH
T ss_pred ccccCC------CCCceEEEE--EECcHHHHHHHH----HHHHhcCCCCCHHHHHHHHhhhhH----------HHHHHHH
Confidence 688888 774 56654 345555554443 333333334444555565555553 2222334
Q ss_pred HHHHHHHHHHHHHh
Q psy16706 81 IISMRQSLKDNLQK 94 (142)
Q Consensus 81 i~~~R~~L~~~l~~ 94 (142)
+.+.+..+.+.|++
T Consensus 269 ~~~~~~~l~~~L~~ 282 (392)
T 3qhx_A 269 HSENAAAVAEFLAE 282 (392)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 44445555566654
No 197
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=63.79 E-value=28 Score=28.46 Aligned_cols=82 Identities=12% Similarity=0.229 Sum_probs=51.7
Q ss_pred hhcCCCCchHHHHHHHHhCChhhHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc----ccccc---eee
Q psy16706 44 AFYSSPPIHGARIVQEILGDPKLKSQWLTE---VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIGM---FCY 113 (142)
Q Consensus 44 ~~~S~pp~~Ga~iv~~IL~dp~L~~~W~~E---l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~----~q~Gm---F~~ 113 (142)
.++.+||.++..-+...|. |..| ++.+.+|.+...+.|++.|++.. | +...+ ..+++ |..
T Consensus 245 ~~~~Tp~v~~i~~l~~al~-------~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~--g-~~~~~~~~~~rs~~ivsf~~ 314 (377)
T 3e77_A 245 SLYNTPPCFSIYVMGLVLE-------WIKNNGGAAAMEKLSSIKSQTIYEIIDNSQ--G-FYVCPVEPQNRSKMNIPFRI 314 (377)
T ss_dssp TCSSCCCHHHHHHHHHHHH-------HHHHTTHHHHHHHHHHHHHHHHHHHHHTST--T-SEECCSCGGGBCSSEEEEEE
T ss_pred CCCCCchHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHhcC--C-ceecCCCHHHcCCcEEEEEc
Confidence 3577899888766665543 4433 68899999999999999998752 1 22111 35566 555
Q ss_pred cCCCH-H----HHHHHhhhccceeeeCC
Q psy16706 114 TGLNA-T----QVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 114 ~gl~~-~----qv~~~L~~~~~Iyl~~~ 136 (142)
-|+.+ + ++-..| .+++|++.+.
T Consensus 315 ~~~~~~~~~~~~~l~~l-~~~Gi~~~~g 341 (377)
T 3e77_A 315 GNAKGDDALEKRFLDKA-LELNMLSLKG 341 (377)
T ss_dssp SSTTCCHHHHHHHHHHH-HHTTEESCBC
T ss_pred CCCCCchhHHHHHHHHH-HHCCcEEeCC
Confidence 56644 2 222225 4679987543
No 198
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=63.20 E-value=20 Score=29.03 Aligned_cols=82 Identities=18% Similarity=0.166 Sum_probs=47.5
Q ss_pred CCCCchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------CCCcccccc----ccceeec-
Q psy16706 47 SSPPIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSN-------KPWNHITDQ----IGMFCYT- 114 (142)
Q Consensus 47 S~pp~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~-------~~w~~i~~q----~GmF~~~- 114 (142)
++||..++.-+...+. ...+| .++.+++++...++.|.+.|++.-.+ ..+..+..+ .|.|..+
T Consensus 332 gt~~~~~~~a~~aal~---~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~ 406 (465)
T 3e9k_A 332 SNPPILLVCSLHASLE---IFKQA--TMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTIT 406 (465)
T ss_dssp SCCCHHHHHHHHHHHH---HHHHH--CHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEE
T ss_pred CCccHHHHHHHHHHHH---HHHHc--CHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEE
Confidence 3666555544443332 11122 27888999999899998888874210 125555433 3555444
Q ss_pred -CCCHHHHHHHhhhccceeee
Q psy16706 115 -GLNATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 115 -gl~~~qv~~~L~~~~~Iyl~ 134 (142)
+.+.+++.++| .+.+|.+.
T Consensus 407 ~~~~~~~l~~~L-~~~Gi~v~ 426 (465)
T 3e9k_A 407 FSVPNKDVFQEL-EKRGVVCD 426 (465)
T ss_dssp ECCTTCCHHHHH-HTTTEECE
T ss_pred ecCCHHHHHHHH-HHCCEEEe
Confidence 44556777768 45688765
No 199
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=62.52 E-value=53 Score=26.07 Aligned_cols=64 Identities=17% Similarity=0.174 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcccccc--ccceeecCC----CHHHHHHHhhhccceeeeC
Q psy16706 71 LTEVKGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQ--IGMFCYTGL----NATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 71 ~~El~~m~~ri~~~R~~L~~~l~~~~~~-~~w~~i~~q--~GmF~~~gl----~~~qv~~~L~~~~~Iyl~~ 135 (142)
.+.++...++....++.+.+.|++.+.- -.+..-... .-.|..+.+ +.+++...| ++.+|++..
T Consensus 247 l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~~~~ 317 (377)
T 3ju7_A 247 MKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDL-KKQKIEARL 317 (377)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHH-HTTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHH-HHCCCceec
Confidence 3455556666666677777777765410 001100000 111222222 378888878 567888754
No 200
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=59.14 E-value=11 Score=30.74 Aligned_cols=59 Identities=15% Similarity=0.202 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCCCCCccccccccceeecCCC----HHHHHHHhhhccceeeeCCC
Q psy16706 77 MADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN----ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~--~~~~~w~~i~~q~GmF~~~gl~----~~qv~~~L~~~~~Iyl~~~G 137 (142)
+.+++.++++.|.+.|++. +.|.....+ ...|+|..+-+. ++++..+|. +++|++.+.|
T Consensus 353 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g 417 (449)
T 2cjg_A 353 LFERAVQHGKYLRARLDELAADFPAVVLDP-RGRGLMCAFSLPTTADRDELIRQLW-QRAVIVLPAG 417 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEETTEEEEECSSHHHHHHHHHHHH-HTTEECEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eeccEEEEEEECChHHHHHHHHHHH-HCCeEEecCC
Confidence 4456666666666666654 222212223 345766666553 456776685 6899998765
No 201
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=58.92 E-value=22 Score=29.09 Aligned_cols=60 Identities=10% Similarity=0.246 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cccccceeec--CCCHHHHHHHhhhccceeeeC
Q psy16706 73 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYT--GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 73 El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i-~~q~GmF~~~--gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
.++.+.+++.+.++.|.+.|++. .|+ +..+ +.+.++|++. +++..++.++| .+.+|.+..
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~-~~g-~~~~~~~~~~~v~~~~~~~~~~~l~~~L-~~~Gi~v~~ 404 (497)
T 3mc6_A 342 GYIESCQEIVGAAMKFKKYIQEN-IPD-LDIMGNPRYSVISFSSKTLNIHELSDRL-SKKGWHFNA 404 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-CTT-CEECSCCCSSEEEEECTTTTHHHHHHHH-HTTTCBCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCC-EEEecCCCeeEEEEeCCCCCHHHHHHHH-HhCCEEEec
Confidence 34567777788888888888874 122 5555 3455666664 56788888878 566887653
No 202
>3hht_A NitrIle hydratase alpha subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: d.149.1.1 PDB: 2dpp_A 1v29_A
Probab=57.32 E-value=4.6 Score=31.65 Aligned_cols=24 Identities=29% Similarity=0.591 Sum_probs=20.6
Q ss_pred CCCCchHHHHHHHHhCChhhHHHH
Q psy16706 47 SSPPIHGARIVQEILGDPKLKSQW 70 (142)
Q Consensus 47 S~pp~~Ga~iv~~IL~dp~L~~~W 70 (142)
...|+.||+||++.-+||++|+.-
T Consensus 57 ~~gP~~GArVVAKAW~Dp~FK~rL 80 (216)
T 3hht_A 57 ELGPMNGAKVVAKAWTDPAFKQRL 80 (216)
T ss_dssp TCCTHHHHHHHHHHHHCHHHHHHH
T ss_pred ccCCccHHHHHHHHhcCHHHHHHH
Confidence 448999999999999999987643
No 203
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=56.80 E-value=43 Score=25.91 Aligned_cols=57 Identities=5% Similarity=0.022 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc--c--ccccc--eeecCCCHHHHHHHhhhccceeeeC
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI--T--DQIGM--FCYTGLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i--~--~q~Gm--F~~~gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
++.+.++.+.+++.+.+.|++.+ +... + ...++ |...+-+.+++.+.| .+.+|++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~ 308 (373)
T 3frk_A 246 LDKWNEERRKIAQKYIAGINNPN----VIIPVEADYAKHVWYTFVIRSEKRDELQKYL-NNNGIGTLI 308 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTT----EECCCCCTTEECCCSSEEEEESSHHHHHHHH-HHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHhccCc----eEeccCCCCCceeeEEEEEEeCCHHHHHHHH-HHCCCCccc
Confidence 44455666666666666665443 2211 1 11122 222233788888878 566998864
No 204
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=55.99 E-value=57 Score=26.50 Aligned_cols=18 Identities=11% Similarity=0.088 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy16706 78 ADRIISMRQSLKDNLQKE 95 (142)
Q Consensus 78 ~~ri~~~R~~L~~~l~~~ 95 (142)
.+++.+.+..+.+.|++.
T Consensus 281 ~~~~~~~a~~l~~~L~~~ 298 (414)
T 3ndn_A 281 VQHSNASAQRIAEFLNGH 298 (414)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 445555667777777654
No 205
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=54.05 E-value=20 Score=29.61 Aligned_cols=59 Identities=10% Similarity=0.103 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCCCCCccccccccceeecCCC----HHHHHHHhhhccceeeeCCC
Q psy16706 77 MADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN----ATQVRRKLIHDRSLKLSNVE 137 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~--~~~~~w~~i~~q~GmF~~~gl~----~~qv~~~L~~~~~Iyl~~~G 137 (142)
+.+++.++++.|.+.|++. +.|+....+. ..|+|..+-+. +.++..+|. +++|++.+.|
T Consensus 376 ~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~-~~g~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g 440 (472)
T 1ohv_A 376 LLSNAAHAGKVLLTGLLDLQARYPQFISRVR-GRGTFCSFDTPDESIRNKLISIAR-NKGVMLGGCG 440 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTTCEEEE-EETTEEEEECSSHHHHHHHHHHHH-HTTEECEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEeec-CCceEEEEEeCChhHHHHHHHHHH-HCCeEEecCC
Confidence 4556666666666666543 2232122233 34766665552 456666675 5899998754
No 206
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=53.92 E-value=49 Score=27.00 Aligned_cols=83 Identities=8% Similarity=0.058 Sum_probs=45.9
Q ss_pred hcCCCCchHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccc-ceee--c--CCC
Q psy16706 45 FYSSPPIHGARIVQEILGDPKLKSQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIG-MFCY--T--GLN 117 (142)
Q Consensus 45 ~~S~pp~~Ga~iv~~IL~dp~L~~~W~~E--l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~G-mF~~--~--gl~ 117 (142)
.+.+||.+|..-+...|. ...++ ++.+.+|.+.+++.|++.|++.+.-+....-...+. ..++ - +++
T Consensus 261 ~~gTp~v~~i~~l~~Al~------~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~ 334 (386)
T 3qm2_A 261 MFNTPPTFAWYLSGLVFK------WLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD 334 (386)
T ss_dssp -----CCSHHHHHHHHHH------HHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH
T ss_pred CCCCCcHHHHHHHHHHHH------HHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc
Confidence 356888888766665543 12333 788999999999999999988742010101112333 3332 2 355
Q ss_pred HHHHHHHhhhccceeeeC
Q psy16706 118 ATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 118 ~~qv~~~L~~~~~Iyl~~ 135 (142)
++-+.. | ++++|.+.+
T Consensus 335 ~~~~~~-L-~~~gI~~~~ 350 (386)
T 3qm2_A 335 KVFLEE-S-FAAGLHALK 350 (386)
T ss_dssp HHHHHH-H-HHTTEECCB
T ss_pred HHHHHH-H-HHCCCEEeC
Confidence 444444 7 578998754
No 207
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=52.11 E-value=55 Score=25.51 Aligned_cols=60 Identities=8% Similarity=0.129 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--ccccceee----c---CCCHHHHHHHhhhccceeeeC
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCY----T---GLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~--~q~GmF~~----~---gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
+.++...+++...++.|.+.|++. |+ +.... .+.+++.+ - |.+.+++...| .+.+|++..
T Consensus 266 ~~l~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L-~~~gI~v~~ 334 (390)
T 3b8x_A 266 KKLPRFISVRRKNAEYFLDKFKDH--PY-LDVQQETGESSWFGFSFIIKKDSGVIRKQLVENL-NSAGIECRP 334 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC--SS-EEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHH-HHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC--CC-cccCCCCCCcccEEEEEEecCcCcccHHHHHHHH-HHCCCCeee
Confidence 345566777777888888888754 22 33222 13444222 2 46788888878 568998875
No 208
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=50.90 E-value=1e+02 Score=25.38 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=37.3
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhh-cCCCCchH-HHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAF-YSSPPIHG-ARIVQEILGDPKLKSQWLTEVKGMAD 79 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~-~S~pp~~G-a~iv~~IL~dp~L~~~W~~El~~m~~ 79 (142)
||++|. .|...|.+++. +++.++.+...+. .+.. .+..|... +.++..-|. .+.....
T Consensus 243 sK~lgg------~g~~~GG~i~~--~~~li~~l~~~~~--~~~~g~~~~~~~~~a~~~~~gl~----------~~~~r~~ 302 (427)
T 3hvy_A 243 IKNIGG------GIATTGGYIAG--KEEYVTQATFRVT--VPGIGGECGSTFGVMRSLYEGLF----------MAPHVTI 302 (427)
T ss_dssp TSGGGT------TTCCSCEEEEE--CHHHHHHHHHHHS--CTTTGGGCCCCTTCHHHHHHHHH----------HHHHHHH
T ss_pred cccccc------cccceEEEEEE--CHHHHHHHHHHhh--cCCcccccCCCHHHHHHHHHhHh----------HHHHHHH
Confidence 788888 77677765443 4555555443211 0111 11222122 444433332 2233445
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy16706 80 RIISMRQSLKDNLQKEG 96 (142)
Q Consensus 80 ri~~~R~~L~~~l~~~~ 96 (142)
+..+....+.+.|++++
T Consensus 303 ~~~~~a~~la~~L~~~g 319 (427)
T 3hvy_A 303 EAVKGAVFCARIMELAG 319 (427)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 55555666667888776
No 209
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=50.53 E-value=86 Score=25.73 Aligned_cols=25 Identities=16% Similarity=0.008 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Q psy16706 73 EVKGMADRIISMRQSLKDNLQKEGS 97 (142)
Q Consensus 73 El~~m~~ri~~~R~~L~~~l~~~~~ 97 (142)
.+..+.++..+....+.+.|++.+.
T Consensus 285 ~~~~~~~~~~~~a~~l~~~L~~~g~ 309 (431)
T 3ht4_A 285 LAPHVAGQALKGAIFTAAFLEKLGM 309 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 3445556666666677788887773
No 210
>4fm4_A NitrIle hydratase alpha subunit; iron type hydratase, hydrolysis, sulfinic acid, lyase; 2.38A {Comamonas testosteroni}
Probab=50.48 E-value=5.5 Score=31.07 Aligned_cols=23 Identities=35% Similarity=0.547 Sum_probs=20.1
Q ss_pred CCCCchHHHHHHHHhCChhhHHH
Q psy16706 47 SSPPIHGARIVQEILGDPKLKSQ 69 (142)
Q Consensus 47 S~pp~~Ga~iv~~IL~dp~L~~~ 69 (142)
.-.|..||++|++--.||++++.
T Consensus 41 ~~gP~~GA~vVArAW~Dp~Fk~~ 63 (209)
T 4fm4_A 41 DWLPQNGAKLVAKAWTDPVFKAQ 63 (209)
T ss_dssp TSCHHHHHHHHHHHHHCHHHHHH
T ss_pred ccCCccchhHHHHHhCCHHHHHH
Confidence 34699999999999999998765
No 211
>3hyb_A RBCX protein; rubisco, protein complex assembly, chaperone; HET: SO4; 2.30A {Anabaena SP} PDB: 2wvw_I 2peo_A* 3rg6_C
Probab=49.88 E-value=64 Score=23.90 Aligned_cols=19 Identities=21% Similarity=0.497 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy16706 74 VKGMADRIISMRQSLKDNL 92 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l 92 (142)
-..+..||..+|..++++.
T Consensus 83 ~~~LA~RIM~VRehlae~v 101 (155)
T 3hyb_A 83 KPDLALRIMTVREHIAEEI 101 (155)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999763
No 212
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=49.50 E-value=5.5 Score=31.42 Aligned_cols=22 Identities=32% Similarity=0.545 Sum_probs=19.5
Q ss_pred CCCchHHHHHHHHhCChhhHHH
Q psy16706 48 SPPIHGARIVQEILGDPKLKSQ 69 (142)
Q Consensus 48 ~pp~~Ga~iv~~IL~dp~L~~~ 69 (142)
..|+.||+||++--.||++|+.
T Consensus 69 ~gP~nGArVVAKAW~Dp~FK~r 90 (226)
T 3qyh_A 69 VGPRNGAKVVAKAWVDPAYKAR 90 (226)
T ss_dssp SSHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCcchhhhhhhhhCCHHHHHH
Confidence 4799999999999999998764
No 213
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=49.28 E-value=1.1e+02 Score=24.97 Aligned_cols=33 Identities=6% Similarity=0.181 Sum_probs=20.8
Q ss_pred Cccccccccceeec---CCCHHHHHHHhhhccceeee
Q psy16706 101 WNHITDQIGMFCYT---GLNATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 101 w~~i~~q~GmF~~~---gl~~~qv~~~L~~~~~Iyl~ 134 (142)
+..+..+.+.+..+ |++..++.+.|+++ +|.+.
T Consensus 285 ~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~~-GI~v~ 320 (446)
T 2x3l_A 285 FEMLQVDDPLKLLIKYEGFTGHDIQNWFMNA-HIYLE 320 (446)
T ss_dssp CEEEECSSTTEEEEECTTSCHHHHHHHHHHT-TEEES
T ss_pred CEECcCCCCeEEEEEeCCcCHHHHHHHHHHC-CCEEE
Confidence 44444444444333 67888888878655 99985
No 214
>3a8g_A NitrIle hydratase subunit alpha; Fe, iron, lyase, metal-binding, oxidation; 1.11A {Rhodococcus erythropolis} PDB: 3a8h_A 3a8l_A 3a8o_A 2zpb_A 2ahj_A 2cyz_A 2cz6_A 2cz7_A 2d0q_A 2cz1_A 2zpe_A 2zpf_A 2zpg_A 2zph_A 2zpi_A 2qdy_A 3a8m_A 2zcf_A 1ahj_A 2cz0_A*
Probab=47.62 E-value=8.3 Score=30.04 Aligned_cols=22 Identities=27% Similarity=0.507 Sum_probs=18.8
Q ss_pred CCCchHHHHHHHHhCChhhHHH
Q psy16706 48 SPPIHGARIVQEILGDPKLKSQ 69 (142)
Q Consensus 48 ~pp~~Ga~iv~~IL~dp~L~~~ 69 (142)
..|+.||+||++--+||++++.
T Consensus 52 ~~P~~GA~vVArAW~DP~Fk~r 73 (207)
T 3a8g_A 52 FSPRRGAELVARAWTDPEFRQL 73 (207)
T ss_dssp SCHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCccccEEeeehhCCHHHHHH
Confidence 3799999999999999987543
No 215
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=46.43 E-value=6.8 Score=30.37 Aligned_cols=23 Identities=30% Similarity=0.520 Sum_probs=19.9
Q ss_pred CCCchHHHHHHHHhCChhhHHHH
Q psy16706 48 SPPIHGARIVQEILGDPKLKSQW 70 (142)
Q Consensus 48 ~pp~~Ga~iv~~IL~dp~L~~~W 70 (142)
..|+.||+||++--+||++++.-
T Consensus 49 ~gP~nGA~vVArAW~Dp~fk~~L 71 (203)
T 1ugp_A 49 VGPHLGAKVVVKAWTDPEFKKRL 71 (203)
T ss_dssp SSHHHHHHHHHHHHHCHHHHHHH
T ss_pred cCCcccCeeeehhhCCHHHHHHH
Confidence 37999999999999999987643
No 216
>2zzd_C Thiocyanate hydrolase subunit gamma; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dxc_C* 2dxb_C 2dd5_C* 2dd4_C*
Probab=46.21 E-value=14 Score=29.40 Aligned_cols=22 Identities=32% Similarity=0.468 Sum_probs=19.5
Q ss_pred CCchHHHHHHHHhCChhhHHHH
Q psy16706 49 PPIHGARIVQEILGDPKLKSQW 70 (142)
Q Consensus 49 pp~~Ga~iv~~IL~dp~L~~~W 70 (142)
.|..||++|++--.||++++..
T Consensus 60 gP~~GArvVArAW~DP~fk~~L 81 (243)
T 2zzd_C 60 GPLPAARLVAKAWLDPEYKKLC 81 (243)
T ss_dssp CSHHHHHHHHHHHHCHHHHHHH
T ss_pred CCCCcceEEEeecCCHHHHHHH
Confidence 6999999999999999987643
No 217
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=45.71 E-value=1.3e+02 Score=24.86 Aligned_cols=74 Identities=15% Similarity=0.024 Sum_probs=37.7
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhc--CCCCchH-HHHHHHHhCChhhHHHHHHHHHHHH
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFY--SSPPIHG-ARIVQEILGDPKLKSQWLTEVKGMA 78 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~--S~pp~~G-a~iv~~IL~dp~L~~~W~~El~~m~ 78 (142)
||+||. -|...|..++. +++.++.+...+ .+... +..|..+ +..+...| ..+....
T Consensus 243 sK~lgg------~g~~~gG~i~~--~~~li~~l~~~~---~~~~~g~~~~~~~~~a~~~l~gl----------~~~~~r~ 301 (427)
T 3i16_A 243 IKNIGG------GIAPTGGYLAG--TKDCIEKTSYRL---TVPGIGGECGSTFGVVRSMYQGL----------FLAPHIS 301 (427)
T ss_dssp TSGGGT------TTCCSCEEEEE--CHHHHHHHHHHH---SCTTTGGGCCCCTTCHHHHHHHH----------HHHHHHH
T ss_pred cccCCC------CCCceEEEEEE--CHHHHHHHHHhc---ccCccCccCCccHHHHHHHHHHH----------HHHHHHH
Confidence 788888 67555554433 455555444321 11111 1223233 34333333 2334455
Q ss_pred HHHHHHHHHHHHHHHhcC
Q psy16706 79 DRIISMRQSLKDNLQKEG 96 (142)
Q Consensus 79 ~ri~~~R~~L~~~l~~~~ 96 (142)
++..+.+..+.+.|++++
T Consensus 302 ~~~~~~a~~la~~L~~~g 319 (427)
T 3i16_A 302 MEALKGAILCSRIMELAG 319 (427)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 666666777778888876
No 218
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=45.46 E-value=42 Score=30.77 Aligned_cols=31 Identities=10% Similarity=0.002 Sum_probs=27.1
Q ss_pred Cccccccee---EEEeCCHHHHHHHHHHHHHHHH
Q psy16706 13 PVGERVGAF---SIVSADKDEAARILSQLKILIR 43 (142)
Q Consensus 13 ~YgeRvGal---~vv~~~~~~~~~v~sql~~~~R 43 (142)
|||.+-..| ++|+.++++++....-|..++.
T Consensus 109 vyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~ 142 (816)
T 3qr0_A 109 CHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY 142 (816)
T ss_dssp EECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred EECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 689887777 8999999999999998988864
No 219
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=43.99 E-value=55 Score=25.84 Aligned_cols=56 Identities=18% Similarity=0.077 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccc----c--ce-eec------CCCHHHHHHHhhhcccee
Q psy16706 74 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQI----G--MF-CYT------GLNATQVRRKLIHDRSLK 132 (142)
Q Consensus 74 l~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~-~q~----G--mF-~~~------gl~~~qv~~~L~~~~~Iy 132 (142)
++.+.++...+++.|.+.|.+. |+ +.... .+. . +| ..+ |.+.+++...|.++++|+
T Consensus 265 ~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~ 334 (418)
T 2c81_A 265 LDDKNAIREKNAMFLNDALSKI--DG-IKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMG 334 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS--TT-EEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CC-cccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCC
Confidence 4555666666777777788654 22 44432 222 1 22 122 567888888787666998
No 220
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=41.31 E-value=1.4e+02 Score=23.94 Aligned_cols=20 Identities=15% Similarity=0.112 Sum_probs=16.3
Q ss_pred CcccccccCCCCcccccceeEEEeCC
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSAD 27 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~ 27 (142)
||.||. .|.|+|.+.+..++
T Consensus 205 ~K~l~~------~g~~~G~~~~~~~~ 224 (421)
T 2ctz_A 205 TKWVGG------HGAVIAGAIVDGGN 224 (421)
T ss_dssp TTTTTC------SSCCCCEEEEECSC
T ss_pred cccccC------CCCcEEEEEEeccc
Confidence 789999 99999998876433
No 221
>3csx_A Putative uncharacterized protein; metalloprotein, nitrogen fixation, cyanobacteria, circadian rhythms, metal binding protein, unknown function; 1.84A {Cyanothece}
Probab=39.04 E-value=38 Score=22.54 Aligned_cols=37 Identities=11% Similarity=0.240 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy16706 68 SQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD 106 (142)
Q Consensus 68 ~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~ 106 (142)
++-.+|++.+..+-.++.-.|+|-.+. .|-+|+.|+.
T Consensus 18 ~eLkkevkKL~~~A~q~kmdLHDLaEd--LP~~w~~i~~ 54 (81)
T 3csx_A 18 ADLKKKVRKLNSKAGQMKMDLHDLAEG--LPTDYENLVE 54 (81)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHH--TTTTGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc--chhhHHHHHH
Confidence 456788888888888888899985543 7888998764
No 222
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=38.42 E-value=1.1e+02 Score=24.93 Aligned_cols=56 Identities=18% Similarity=0.231 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccc---eee-c--CCCHHHHHHHhhhccceee
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM---FCY-T--GLNATQVRRKLIHDRSLKL 133 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~Gm---F~~-~--gl~~~qv~~~L~~~~~Iyl 133 (142)
+.++.+.+++...+..|.+.|++.+ +.... ..+. |.. + +.+.+++.++|. +++|++
T Consensus 340 ~~l~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~-~~Gi~~ 401 (474)
T 1wyu_B 340 EGLKKAAALAVLNARYLKELLKEKG----YRVPY-DGPSMHEFVAQPPEGFRALDLAKGLL-ELGFHP 401 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CBCSS-CSSCCSCEEEBCSTTCCHHHHHHHHH-HTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC----cEecC-CCCcceEEEEEcCCCCCHHHHHHHHH-HCCccc
Confidence 3466677888888888889998764 33322 2222 222 2 567888888785 458875
No 223
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=37.50 E-value=80 Score=26.51 Aligned_cols=14 Identities=7% Similarity=-0.140 Sum_probs=11.1
Q ss_pred hccceeeeCCCccc
Q psy16706 127 HDRSLKLSNVEKCS 140 (142)
Q Consensus 127 ~~~~Iyl~~~Gri~ 140 (142)
-+.+||+.|.|++-
T Consensus 409 l~~Gv~~~p~~~~~ 422 (454)
T 4ao9_A 409 LNEDIYSSPRGFVV 422 (454)
T ss_dssp HHTTEECCTTCEEE
T ss_pred HHCCEEEcCCCCEE
Confidence 36799999998763
No 224
>2peq_A ORF134; helix bundle, protein complex assembly, chaperone; 1.90A {Synechococcus SP} SCOP: a.280.1.1 PDB: 2pem_A 2pen_A 2z44_A 2z45_A 2z46_A 2pek_A 2pej_A 2pei_A
Probab=36.86 E-value=1.1e+02 Score=21.99 Aligned_cols=17 Identities=29% Similarity=0.587 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy16706 75 KGMADRIISMRQSLKDN 91 (142)
Q Consensus 75 ~~m~~ri~~~R~~L~~~ 91 (142)
..+..||..+|..++++
T Consensus 65 ~~LAlRIM~VRe~ya~e 81 (134)
T 2peq_A 65 KELVLRILTVRENLAEG 81 (134)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 46789999999999976
No 225
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=31.28 E-value=81 Score=25.62 Aligned_cols=55 Identities=9% Similarity=0.086 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCccccccccceeec-CCC--HHHHHHHhhhc
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYT-GLN--ATQVRRKLIHD 128 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~-~~~~w~~i~~q~GmF~~~-gl~--~~qv~~~L~~~ 128 (142)
+.++.+.+++...|+.|.+.|++.. .+| +..++.+ +++++. +++ ++++..+|.++
T Consensus 346 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~v~~~~-~~v~~~~~~~~~~~~l~~~L~~~ 404 (456)
T 2z67_A 346 KNYLELVKNQKNSKKLLDELLNDLSKKTG-GKFLDVE-SPIASCISVNSDPVEIAAKLYNL 404 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CCBCCCC-CSSEEEEECSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccC-CEecCCC-CeEEEEEecccHHHHHHHHHHHc
Confidence 3456677888888888888888761 001 3334444 554432 112 36677668543
No 226
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=31.08 E-value=37 Score=18.31 Aligned_cols=20 Identities=30% Similarity=0.619 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q psy16706 77 MADRIISMRQSLKDNLQKEG 96 (142)
Q Consensus 77 m~~ri~~~R~~L~~~l~~~~ 96 (142)
+++|+...|.++.+.|++.|
T Consensus 2 lrkrlrkfrnkikeklkkig 21 (32)
T 1lyp_A 2 LRKRLRKFRNKIKEKLKKIG 21 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45667777777666666544
No 227
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=30.96 E-value=31 Score=20.00 Aligned_cols=15 Identities=20% Similarity=0.465 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHH
Q psy16706 71 LTEVKGMADRIISMR 85 (142)
Q Consensus 71 ~~El~~m~~ri~~~R 85 (142)
.++++.|..|+...|
T Consensus 25 Eedi~~MqsRLaALR 39 (40)
T 2xze_Q 25 EEALEAMQSRLATLR 39 (40)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 457899999998776
No 228
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=30.69 E-value=85 Score=18.56 Aligned_cols=27 Identities=4% Similarity=0.214 Sum_probs=19.4
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHh
Q psy16706 68 SQWLTE-VKGMADRIISMRQSLKDNLQK 94 (142)
Q Consensus 68 ~~W~~E-l~~m~~ri~~~R~~L~~~l~~ 94 (142)
..|.+| |++|+.-|++|.+.++++++.
T Consensus 10 e~~KqEIL~E~RkElqK~K~EIIeAi~~ 37 (45)
T 1use_A 10 QRVKQELLEEVKKELQKVKEEIIEAFVQ 37 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555 577888888888888877653
No 229
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=30.38 E-value=57 Score=19.43 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=18.7
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHh-CChhhHHHHHH
Q psy16706 38 LKILIRAFYSSPPIHGARIVQEIL-GDPKLKSQWLT 72 (142)
Q Consensus 38 l~~~~R~~~S~pp~~Ga~iv~~IL-~dp~L~~~W~~ 72 (142)
|..+.|..=|.+...-..-|-.|| +||.|.+.+.+
T Consensus 3 LqqLl~tlksp~sp~qqqqvl~ILksnPqLMAAfIk 38 (47)
T 1zoq_C 3 LQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIK 38 (47)
T ss_dssp HHHHHHTCCSCCCHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 444555444444434444444444 58998776543
No 230
>2py8_A Hypothetical protein RBCX; all helical fold, chaperone; HET: PE4; 2.45A {Synechocystis SP} SCOP: a.280.1.1
Probab=30.38 E-value=1.6e+02 Score=21.51 Aligned_cols=17 Identities=24% Similarity=0.558 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy16706 75 KGMADRIISMRQSLKDN 91 (142)
Q Consensus 75 ~~m~~ri~~~R~~L~~~ 91 (142)
..+..||..+|..+.++
T Consensus 65 ~~LAlRIMeVR~~ya~e 81 (147)
T 2py8_A 65 KELVLRILAVREDIAES 81 (147)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45789999999999875
No 231
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=29.04 E-value=1.1e+02 Score=22.74 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=29.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy16706 63 DPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSN 98 (142)
Q Consensus 63 dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~ 98 (142)
|++--++-.+|+...+..+...|.++..++++.|.|
T Consensus 111 DeakI~aL~~Ei~~Lr~qL~~~R~k~~~em~KeGip 146 (175)
T 3lay_A 111 DTAKINAVAKEMESLGQKLDEQRVKRDVAMAQAGIP 146 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 445556778899999999999999999999887855
No 232
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=28.70 E-value=32 Score=28.03 Aligned_cols=50 Identities=16% Similarity=0.200 Sum_probs=32.7
Q ss_pred cccccceeEEEeCCHHHHH-HHHHHHHHH-HHhhcCCCCchHHHHHHHHhCChhhHH
Q psy16706 14 VGERVGAFSIVSADKDEAA-RILSQLKIL-IRAFYSSPPIHGARIVQEILGDPKLKS 68 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~-~v~sql~~~-~R~~~S~pp~~Ga~iv~~IL~dp~L~~ 68 (142)
|+.|+|.+++..+|.+++. ++...+..+ +++.-.| -.....||.+|++.+
T Consensus 382 ~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~~~g~~~~-----~~~~~~~~~~~~~~~ 433 (451)
T 2vpq_A 382 YDSMVAKLIIHEPTRDEAIMAGIRALSEFVVLGIDTT-----IPFHIKLLNNDIFRS 433 (451)
T ss_dssp TCCEEEEEEEEESSHHHHHHHHHHHHHTCEEESSCCS-----HHHHHHHHTCHHHHH
T ss_pred cccccEEEEEEeCCHHHHHHHHHHHHhccEEeCcCCC-----HHHHHHHhCCHhhhc
Confidence 7779999999999987763 333333322 2333333 447888999988753
No 233
>2js5_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural genomics, PSI-2, protein structure initiative; NMR {Methylococcus capsulatus}
Probab=28.41 E-value=1.1e+02 Score=19.80 Aligned_cols=36 Identities=17% Similarity=0.373 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy16706 69 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD 106 (142)
Q Consensus 69 ~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~ 106 (142)
+-.+|++.+..+-.++.-.|.|-.+ +.|-+|+-|+.
T Consensus 7 eLkkevkKL~~~A~q~kmdLHDLaE--dLP~~w~~i~~ 42 (71)
T 2js5_A 7 ELKAKLKKLNAQATALKMDLHDLAE--DLPTGWNRIME 42 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--STTTSGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhc--cchhhHHHHHH
Confidence 4577888888888888888888544 58999998874
No 234
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=28.32 E-value=87 Score=25.22 Aligned_cols=82 Identities=9% Similarity=0.220 Sum_probs=50.3
Q ss_pred HhhcCCCCchHHHHHHHHhCChhhHHHHH-HH--HHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccc---cccc-cceeec
Q psy16706 43 RAFYSSPPIHGARIVQEILGDPKLKSQWL-TE--VKGMADRIISMRQSLKDNLQKEGSNKPW-NHI---TDQI-GMFCYT 114 (142)
Q Consensus 43 R~~~S~pp~~Ga~iv~~IL~dp~L~~~W~-~E--l~~m~~ri~~~R~~L~~~l~~~~~~~~w-~~i---~~q~-GmF~~~ 114 (142)
...|.+||.++..-+...|. |. ++ ++.+.+|.+.+++.|++.|++.+. + ..+ ..++ +..++.
T Consensus 232 ~~~~~Tp~v~~i~~l~~al~-------~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g---~~~~~~~~~~rs~~ivsf~ 301 (361)
T 3m5u_A 232 QSLFNTPPTFAIYMFNLEMD-------WLLNQGGLDKVHEKNSQKATMLYECIDLSNG---FYKGHADKKDRSLMNVSFN 301 (361)
T ss_dssp TTCSSCCCHHHHHHHHHHHH-------HHHTTTCHHHHHHHHHHHHHHHHHHHHTSTT---SEEESSCGGGBCSSEEEEE
T ss_pred CCCCCCccHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHHCCC---eeeccCCHHHcCCeEEEEE
Confidence 45567888877765555443 33 33 788899999999999999987651 2 111 1223 344432
Q ss_pred --C---CCHHHHHHHhhhccceeeeCC
Q psy16706 115 --G---LNATQVRRKLIHDRSLKLSNV 136 (142)
Q Consensus 115 --g---l~~~qv~~~L~~~~~Iyl~~~ 136 (142)
+ ++ +++...| ++++|++.+.
T Consensus 302 ~~~~~~~~-~~~~~~L-~~~gI~~~~g 326 (361)
T 3m5u_A 302 IAKNKDLE-PLFVKEA-EEAGMIGLKG 326 (361)
T ss_dssp ESSCTTHH-HHHHHHH-HHTTEECCBC
T ss_pred CCCchhhh-HHHHHHH-HHCCCEEecC
Confidence 3 44 3455536 6779987543
No 235
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=27.91 E-value=1.7e+02 Score=26.13 Aligned_cols=20 Identities=25% Similarity=0.185 Sum_probs=15.0
Q ss_pred cCCCHHHHHHHhhhccceeee
Q psy16706 114 TGLNATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 114 ~gl~~~qv~~~L~~~~~Iyl~ 134 (142)
.|+++.++...|+ +++|+.-
T Consensus 552 ~g~~~~~l~~~L~-~~gI~~e 571 (755)
T 2vyc_A 552 TGVPAALVTAWLG-RHGIVPT 571 (755)
T ss_dssp SCCCHHHHHHHHH-TTTCCCS
T ss_pred cCCcHHHHHHHHH-HCCCEEe
Confidence 3677789988685 5999874
No 236
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=26.58 E-value=2.4e+02 Score=23.22 Aligned_cols=58 Identities=9% Similarity=0.197 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccceeec--C---CCHHHHHHHhhhccceee
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--G---LNATQVRRKLIHDRSLKL 133 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~--q~GmF~~~--g---l~~~qv~~~L~~~~~Iyl 133 (142)
+.+..+.++....++.|.+.|++.+ .+..+.. +.+++++. + ++..++..+| .+.+|.+
T Consensus 338 ~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L-~~~Gi~v 402 (502)
T 3hbx_A 338 EGYRNVMENCRENMIVLREGLEKTE---RFNIVSKDEGVPLVAFSLKDSSCHTEFEISDML-RRYGWIV 402 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTT---CEEECSCSSSSSEEEEEESSCSSCCHHHHHHHH-HTTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC---CEEEEeCCCCceEEEEEecCCCcCCHHHHHHHH-HhCCcEE
Confidence 4556677777777888889998764 2666654 55666653 2 5677787768 5677754
No 237
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=26.16 E-value=1.1e+02 Score=18.45 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=25.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 64 PKLKSQWLTEVKGMADRIISMRQSLKDNLQ 93 (142)
Q Consensus 64 p~L~~~W~~El~~m~~ri~~~R~~L~~~l~ 93 (142)
..|..+-..|+++.+.|...-|+-+.+++.
T Consensus 20 ~~Ld~~Me~Ei~elr~RY~~KRqPIldAi~ 49 (51)
T 2jo8_A 20 LALDPMMEQEIEEIRQKYQSKRQPILDAIE 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHccHHHHHHHHHHHHHHHHhHhhHHHHHh
Confidence 345667789999999999999999998875
No 238
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=24.59 E-value=2.2e+02 Score=21.23 Aligned_cols=58 Identities=14% Similarity=0.254 Sum_probs=43.9
Q ss_pred hHHHHHHHHhC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHhh
Q psy16706 52 HGARIVQEILG--DPKLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKLI 126 (142)
Q Consensus 52 ~Ga~iv~~IL~--dp~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L~ 126 (142)
.++..+..++. |++-.++..+++..+...-..++..+...|.+ ||| +|++.+++.. |.
T Consensus 41 ~~a~~L~~~l~~~~~~~~~~~~~~I~~lE~~aD~i~~~i~~~L~~--------------~fi--tP~dReDI~~-L~ 100 (227)
T 3l39_A 41 ASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELST--------------TFI--TPFDREDIHD-LA 100 (227)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------CSC--CSSCHHHHHH-HH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------cCc--CCCCHHHHHH-HH
Confidence 46888888888 76667778888888888888888888887754 233 8888887776 54
No 239
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=24.16 E-value=1.4e+02 Score=23.59 Aligned_cols=80 Identities=16% Similarity=0.249 Sum_probs=52.4
Q ss_pred cccceeEEEeCCHHHHHHHHHHHHHHHH---hh-----cCCC-CchHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q psy16706 16 ERVGAFSIVSADKDEAARILSQLKILIR---AF-----YSSP-PIHGARIVQEILGDPKLKSQWLTEVKGMADRIISMRQ 86 (142)
Q Consensus 16 eRvGal~vv~~~~~~~~~v~sql~~~~R---~~-----~S~p-p~~Ga~iv~~IL~dp~L~~~W~~El~~m~~ri~~~R~ 86 (142)
.+.|...++.-++.....+...+..+.+ .. |+.- .+.|-..++.+|. ..|...-.+|+-.+.+.|.....
T Consensus 227 l~~~~~~v~~~SA~~~~~i~~l~~~l~~e~~~f~~~~~~~~~~~r~~~~~l~~~l~-e~l~~~i~~~lP~l~~~i~~~~~ 305 (353)
T 2x2e_A 227 LRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLN-QQLTNHIRDTLPGLRNKLQSQLL 305 (353)
T ss_dssp CTTCEEECCCCCHHHHHTTCCHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEeCCcccccccccHHHHHHHHHHHhccCCcccccHHhhCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666777776665554443333332 22 3322 3456678888887 57778888999999999988877
Q ss_pred HHHHHHHhcC
Q psy16706 87 SLKDNLQKEG 96 (142)
Q Consensus 87 ~L~~~l~~~~ 96 (142)
.+-.++++.+
T Consensus 306 ~~~~~l~~~~ 315 (353)
T 2x2e_A 306 SIEKEVEEYK 315 (353)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHcc
Confidence 7777777654
No 240
>1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1
Probab=23.63 E-value=99 Score=20.62 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=34.5
Q ss_pred hHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16706 52 HGARIVQEILGD-PKLKSQWLTEVKGMADRIISMRQSLK 89 (142)
Q Consensus 52 ~Ga~iv~~IL~d-p~L~~~W~~El~~m~~ri~~~R~~L~ 89 (142)
-||.-+..+++| ..-+..-..||+....+|..++..|.
T Consensus 42 eGaENL~katt~~kk~~~~V~~eL~~sn~kl~~L~~eL~ 80 (86)
T 1cxz_B 42 EGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQQLQ 80 (86)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999 88899999999999999999888776
No 241
>3ka1_A RBCX protein; chaperone, helix bundle, rubisco assembly; 1.71A {Thermosynechococcus elongatus bp-1} PDB: 3q20_A
Probab=23.09 E-value=2.1e+02 Score=20.39 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy16706 72 TEVKGMADRIISMRQSLKDNL 92 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l 92 (142)
.|-..+..||..+|..++++.
T Consensus 62 ~E~~~LA~RIM~vR~hla~~v 82 (126)
T 3ka1_A 62 REQPDLGFRILTVREHLAEMV 82 (126)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHHHHHH
Confidence 334678999999999999763
No 242
>1kbh_B CREB-binding protein, nuclear receptor coactivator; nuclear hormone receptors, ACTR, CBP, transcription; NMR {Mus musculus} SCOP: a.153.1.1 PDB: 2c52_A 2kkj_A 2l14_A
Probab=22.28 E-value=99 Score=19.21 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=17.0
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHh-CChhhHHHHH
Q psy16706 38 LKILIRAFYSSPPIHGARIVQEIL-GDPKLKSQWL 71 (142)
Q Consensus 38 l~~~~R~~~S~pp~~Ga~iv~~IL-~dp~L~~~W~ 71 (142)
|..+.|..=|.+...-..-|-.|| +||.|.+.+.
T Consensus 10 LqqLl~tlksp~speqqqqvl~ILksNPqLMAAfI 44 (59)
T 1kbh_B 10 LQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFI 44 (59)
T ss_dssp HHHHHHHHHSCTTTTCSTHHHHHHTTSHHHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 333444443444333344444555 5899866543
No 243
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=22.20 E-value=2.1e+02 Score=24.82 Aligned_cols=69 Identities=17% Similarity=0.198 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee---cCCCHHHHHHHhhhccceeeeC
Q psy16706 65 KLKSQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY---TGLNATQVRRKLIHDRSLKLSN 135 (142)
Q Consensus 65 ~L~~~W~~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~~q~GmF~~---~gl~~~qv~~~L~~~~~Iyl~~ 135 (142)
.+++.+..|.+.+.+++...-+.|.++|.+.|.+- ..--++.+=|..= .|++-.+++..| ++-+|-+-+
T Consensus 324 af~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~v-vsGgTdnHlvLvDl~~~g~tG~~ae~~L-e~agItvNk 395 (490)
T 3ou5_A 324 ALKQACTPMFREYSLQVLKNARAMADALLERGYSL-VSGGTDNHLVLVDLRPKGLDGARAERVL-ELVSITANK 395 (490)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEE-GGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECEE
T ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCee-ecCCCCceEEEEeccccCCCHHHHHHHH-HHcCcEECC
Confidence 46677888999999999999999999999888431 1111222222221 277888898855 888887654
No 244
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=21.41 E-value=1.3e+02 Score=24.39 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=36.1
Q ss_pred cccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCChhhHH-----HHHHH
Q psy16706 14 VGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDPKLKS-----QWLTE 73 (142)
Q Consensus 14 YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp~L~~-----~W~~E 73 (142)
|+.++|.+++..+|.+++.+-..+....++ +.- -+.--.....||.+|++.+ .|.++
T Consensus 381 ~~~~~~~v~~~g~~~~~a~~~~~~~~~~i~--~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 442 (449)
T 2w70_A 381 YDSMIGKLICYGENRDVAIARMKNALQELI--IDG-IKTNVDLQIRIMNDENFQHGGTNIHYLEK 442 (449)
T ss_dssp SCSEEEEEEEEESSHHHHHHHHHHHHHHCE--EES-SCCSHHHHHHHHTCHHHHHCCCCTTHHHH
T ss_pred cCcceEEEEEEcCCHHHHHHHHHHHHhhcE--EeC-cCCCHHHHHHHHcChhhccCCceehhhhh
Confidence 567789999999998775443333322222 222 4444556788999998764 56654
No 245
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=21.24 E-value=64 Score=29.93 Aligned_cols=33 Identities=15% Similarity=0.074 Sum_probs=27.4
Q ss_pred Cccccc---ceeEEEeCCHHHHHHHHHHHHHHHHhh
Q psy16706 13 PVGERV---GAFSIVSADKDEAARILSQLKILIRAF 45 (142)
Q Consensus 13 ~YgeRv---Gal~vv~~~~~~~~~v~sql~~~~R~~ 45 (142)
|||.+- -.|++|++|+++++....-|..++...
T Consensus 106 vyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~~ 141 (885)
T 3ohm_B 106 VSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNI 141 (885)
T ss_dssp EECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHCH
T ss_pred EECCCCccceEEEEEeCChHHHHHHHHHHHHHHhhh
Confidence 688773 469999999999999988888887743
No 246
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=21.17 E-value=1.9e+02 Score=23.32 Aligned_cols=59 Identities=8% Similarity=0.356 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeec--CCC--HHHHHHHhhhccceeee
Q psy16706 73 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT--GLN--ATQVRRKLIHDRSLKLS 134 (142)
Q Consensus 73 El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~-~q~GmF~~~--gl~--~~qv~~~L~~~~~Iyl~ 134 (142)
.++.+.+++..+++.|.+.|++. |+ +..+. .+.+++++. +.+ .+++..+|.++..+++.
T Consensus 373 g~~~~~~~~~~~a~~l~~~L~~~--~~-~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~ 436 (486)
T 1js3_A 373 GLQAYIRKHVQLSHEFEAFVLQD--PR-FEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLV 436 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--TT-EEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CC-eEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEE
Confidence 46667777888888888888874 22 55543 356677654 221 35666668665555543
No 247
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=21.07 E-value=61 Score=20.84 Aligned_cols=31 Identities=16% Similarity=0.427 Sum_probs=23.2
Q ss_pred HHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHh
Q psy16706 88 LKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVRRKL 125 (142)
Q Consensus 88 L~~~l~~~~~~~~w~~i~~q~GmF~~~gl~~~qv~~~L 125 (142)
|.+++++.| ++|..|...-| +=+++|+..|-
T Consensus 29 Ll~~v~~~G--~~W~~IA~~v~-----~RT~~qcr~r~ 59 (79)
T 2yus_A 29 LLEALEMYK--DDWNKVSEHVG-----SRTQDECILHF 59 (79)
T ss_dssp HHHHHHHSS--SCHHHHHHHHS-----SCCHHHHHHHH
T ss_pred HHHHHHHhC--CCHHHHHHHcC-----CCCHHHHHHHH
Confidence 445677777 78999988654 56899998744
No 248
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=20.76 E-value=3.5e+02 Score=22.15 Aligned_cols=52 Identities=12% Similarity=0.002 Sum_probs=26.9
Q ss_pred CcccccccCCCCcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHhCCh
Q psy16706 2 KKNYGIHFTCLPVGERVGAFSIVSADKDEAARILSQLKILIRAFYSSPPIHGARIVQEILGDP 64 (142)
Q Consensus 2 SKnfgL~~~~~~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S~pp~~Ga~iv~~IL~dp 64 (142)
||.||.+ .|-|+|++. +++++.++.+. ......-.+++..++..+...|.+.
T Consensus 277 sK~~~g~-----~Gl~~G~l~--~~~~~l~~~l~----~~~~~~g~~~~~~~~~a~~~al~~~ 328 (464)
T 1ibj_A 277 TKFIAGH-----SDVMAGVLA--VKGEKLAKEVY----FLQNSEGSGLAPFDCWLCLRGIKTM 328 (464)
T ss_dssp TTTTTCS-----SCCCCEEEE--ECSHHHHHHHH----HHHHHTTCBCCHHHHHHHHHHHTTH
T ss_pred cccccCC-----CCCcEEEEE--EChHHHHHHHH----HHHHhcCCCCCHHHHHHHHhchhhH
Confidence 6777541 577999654 45555554443 2222222233334555555666653
No 249
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=20.57 E-value=2e+02 Score=23.47 Aligned_cols=40 Identities=5% Similarity=0.258 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc---ccccceeec
Q psy16706 72 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT---DQIGMFCYT 114 (142)
Q Consensus 72 ~El~~m~~ri~~~R~~L~~~l~~~~~~~~w~~i~---~q~GmF~~~ 114 (142)
+.++.+.+++..+++.|.+.|++. |+ +..+. .+.++|++.
T Consensus 382 ~g~~~~~~~~~~~a~~l~~~L~~~--~~-~~~~~~~~p~~~~v~f~ 424 (504)
T 2okj_A 382 VGFENQINKCLELAEYLYAKIKNR--EE-FEMVFNGEPEHTNVCFW 424 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC--TT-EEESSSSCCSSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--CC-EEEEecCCCCeEEEEEE
Confidence 346667788888888888888764 22 66664 577888875
No 250
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=20.08 E-value=1.4e+02 Score=23.28 Aligned_cols=35 Identities=9% Similarity=0.024 Sum_probs=25.1
Q ss_pred CcccccceeEEEeCCHHHHHHHHHHHHHHHHhhcC
Q psy16706 13 PVGERVGAFSIVSADKDEAARILSQLKILIRAFYS 47 (142)
Q Consensus 13 ~YgeRvGal~vv~~~~~~~~~v~sql~~~~R~~~S 47 (142)
-|+.|+|.+++..+|.+++.+-..+....+|..|.
T Consensus 326 ~~~~~v~~vi~~G~~~~eA~~k~~~al~~i~~~~g 360 (363)
T 4ffl_A 326 KGEYPVFTMVFWGKDREETGAKRCKGLSVLKERFG 360 (363)
T ss_dssp ESSSCEEEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCceEEEEEEECCHHHHHHHHHHHHHHHHHHhc
Confidence 37889999999999988775544444455565553
Done!