Query psy16707
Match_columns 420
No_of_seqs 305 out of 1832
Neff 6.1
Searched_HMMs 46136
Date Fri Aug 16 19:57:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16707.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16707hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 4.9E-68 1.1E-72 528.4 25.6 260 139-419 5-396 (396)
2 KOG1411|consensus 100.0 1.5E-68 3.4E-73 523.5 18.5 271 129-420 21-424 (427)
3 KOG1412|consensus 100.0 2.8E-66 6E-71 502.1 21.3 261 139-420 9-404 (410)
4 KOG1412|consensus 100.0 4.5E-44 9.7E-49 347.5 13.4 125 3-127 278-402 (410)
5 KOG1411|consensus 100.0 1.5E-44 3.2E-49 354.8 9.2 126 4-129 299-424 (427)
6 COG1448 TyrB Aspartate/tyrosin 100.0 9.2E-44 2E-48 354.7 13.8 125 3-127 271-395 (396)
7 PLN02397 aspartate transaminas 100.0 1.9E-34 4.1E-39 298.2 29.5 260 139-419 27-419 (423)
8 PRK09257 aromatic amino acid a 100.0 6.7E-32 1.4E-36 275.8 28.6 260 139-419 5-396 (396)
9 PTZ00376 aspartate aminotransf 100.0 1.7E-31 3.6E-36 274.0 28.5 260 139-419 8-401 (404)
10 COG0436 Aspartate/tyrosine/aro 99.9 1E-23 2.2E-28 216.9 25.2 228 153-418 20-388 (393)
11 PRK08637 hypothetical protein; 99.8 1.9E-19 4.1E-24 183.8 24.1 233 159-420 2-385 (388)
12 PLN00175 aminotransferase fami 99.8 5.6E-19 1.2E-23 182.4 24.8 245 130-420 28-412 (413)
13 TIGR01264 tyr_amTase_E tyrosin 99.8 6.2E-19 1.3E-23 180.5 23.9 241 143-419 12-397 (401)
14 PRK07366 succinyldiaminopimela 99.8 7.4E-18 1.6E-22 171.6 25.4 237 139-416 7-385 (388)
15 PTZ00377 alanine aminotransfer 99.8 3.5E-18 7.6E-23 179.7 21.5 231 158-419 44-473 (481)
16 PRK06108 aspartate aminotransf 99.8 1.3E-17 2.8E-22 168.6 24.5 236 141-419 7-380 (382)
17 PLN00145 tyrosine/nicotianamin 99.8 1.5E-17 3.2E-22 172.8 24.8 219 159-417 51-417 (430)
18 PLN00143 tyrosine/nicotianamin 99.8 1.6E-17 3.5E-22 171.1 24.8 238 144-417 16-400 (409)
19 PRK09148 aminotransferase; Val 99.8 2.4E-17 5.3E-22 169.5 25.4 236 139-415 7-384 (405)
20 PRK06855 aminotransferase; Val 99.8 1.6E-17 3.5E-22 172.5 23.0 226 158-419 30-427 (433)
21 PRK07681 aspartate aminotransf 99.8 3.7E-17 7.9E-22 167.4 25.1 241 134-417 5-384 (399)
22 TIGR03540 DapC_direct LL-diami 99.8 4.8E-17 1E-21 165.3 25.2 235 139-417 6-379 (383)
23 PRK08960 hypothetical protein; 99.8 3.7E-17 8.1E-22 166.6 23.8 236 139-418 9-381 (387)
24 PLN02656 tyrosine transaminase 99.8 4.6E-17 1E-21 167.6 24.6 235 146-417 16-399 (409)
25 PRK07550 hypothetical protein; 99.8 5.9E-17 1.3E-21 164.9 24.8 237 141-417 8-383 (386)
26 PRK07337 aminotransferase; Val 99.8 4.5E-17 9.7E-22 165.9 23.7 239 134-417 3-382 (388)
27 PRK13355 bifunctional HTH-doma 99.8 4.2E-17 9.1E-22 173.1 24.4 246 132-417 117-510 (517)
28 PRK09276 LL-diaminopimelate am 99.8 7.7E-17 1.7E-21 163.8 25.1 240 134-418 4-382 (385)
29 PRK08068 transaminase; Reviewe 99.8 8.3E-17 1.8E-21 164.2 25.1 235 139-417 9-382 (389)
30 PRK07865 N-succinyldiaminopime 99.8 7.4E-17 1.6E-21 162.9 24.5 238 132-415 1-362 (364)
31 PRK08636 aspartate aminotransf 99.8 8.3E-17 1.8E-21 165.2 24.9 238 141-419 12-398 (403)
32 PRK06107 aspartate aminotransf 99.8 1E-16 2.2E-21 164.4 24.4 245 133-419 5-398 (402)
33 PRK07682 hypothetical protein; 99.8 1.2E-16 2.7E-21 161.9 24.2 232 144-419 6-374 (378)
34 PRK07683 aminotransferase A; V 99.8 1.4E-16 3.1E-21 162.6 24.0 235 139-417 9-379 (387)
35 PRK07309 aromatic amino acid a 99.8 1.4E-16 3.1E-21 162.8 23.9 244 131-419 4-386 (391)
36 PRK09082 methionine aminotrans 99.8 1.3E-16 2.9E-21 162.6 23.5 239 130-417 4-382 (386)
37 PRK06348 aspartate aminotransf 99.8 1.7E-16 3.8E-21 161.7 24.2 232 139-417 10-378 (384)
38 PRK05957 aspartate aminotransf 99.8 2.4E-16 5.3E-21 161.0 25.1 220 160-417 27-381 (389)
39 PRK05942 aspartate aminotransf 99.8 3.9E-16 8.4E-21 159.6 26.5 242 132-418 6-386 (394)
40 PRK08912 hypothetical protein; 99.7 2.9E-16 6.2E-21 159.9 24.4 234 139-418 8-383 (387)
41 PLN02231 alanine transaminase 99.7 5.7E-16 1.2E-20 165.4 27.4 267 116-417 76-523 (534)
42 PLN02187 rooty/superroot1 99.7 2.5E-16 5.5E-21 165.3 24.1 227 154-418 60-435 (462)
43 PRK08361 aspartate aminotransf 99.7 2.2E-16 4.9E-21 161.1 23.1 243 134-418 10-387 (391)
44 PRK05764 aspartate aminotransf 99.7 2.7E-16 5.7E-21 160.0 23.4 244 133-419 3-389 (393)
45 PF00155 Aminotran_1_2: Aminot 99.7 9.9E-18 2.1E-22 167.9 12.2 222 161-415 2-363 (363)
46 PTZ00433 tyrosine aminotransfe 99.7 3.2E-16 6.9E-21 161.4 23.5 225 157-418 30-405 (412)
47 PRK15481 transcriptional regul 99.7 1.8E-16 4E-21 164.0 21.1 216 160-419 85-429 (431)
48 PRK06290 aspartate aminotransf 99.7 1.1E-15 2.3E-20 158.0 25.9 219 159-419 43-403 (410)
49 PRK08175 aminotransferase; Val 99.7 9.8E-16 2.1E-20 156.7 24.0 219 159-418 28-386 (395)
50 PRK07590 L,L-diaminopimelate a 99.7 7.2E-16 1.6E-20 158.5 23.1 219 159-418 33-408 (409)
51 PRK07324 transaminase; Validat 99.7 3.5E-16 7.6E-21 159.2 19.7 212 159-417 25-366 (373)
52 PLN02450 1-aminocyclopropane-1 99.7 9.6E-16 2.1E-20 161.1 22.4 241 141-419 13-428 (468)
53 PRK07777 aminotransferase; Val 99.7 2.8E-15 6.1E-20 152.7 24.4 234 139-417 6-382 (387)
54 PRK09147 succinyldiaminopimela 99.7 4.1E-15 8.9E-20 152.1 25.5 237 139-419 5-394 (396)
55 PRK09265 aminotransferase AlaT 99.7 3.6E-15 7.8E-20 153.0 24.9 248 133-419 5-399 (404)
56 PRK07568 aspartate aminotransf 99.7 3.9E-15 8.5E-20 151.6 24.8 242 134-419 3-390 (397)
57 TIGR01265 tyr_nico_aTase tyros 99.7 2.4E-15 5.2E-20 154.4 23.1 238 144-418 13-398 (403)
58 PRK06207 aspartate aminotransf 99.7 2E-15 4.3E-20 155.5 22.3 220 159-417 38-398 (405)
59 PRK09275 aspartate aminotransf 99.7 1.1E-15 2.3E-20 162.8 20.8 108 161-297 101-212 (527)
60 PLN02607 1-aminocyclopropane-1 99.7 2E-15 4.4E-20 157.9 22.5 239 143-419 24-435 (447)
61 PRK12414 putative aminotransfe 99.7 3.5E-15 7.5E-20 152.3 23.7 211 159-418 28-381 (384)
62 TIGR03539 DapC_actino succinyl 99.7 4.1E-15 8.9E-20 150.2 23.6 225 145-417 7-355 (357)
63 TIGR03538 DapC_gpp succinyldia 99.7 6.8E-15 1.5E-19 150.3 24.8 128 139-298 4-139 (393)
64 COG1167 ARO8 Transcriptional r 99.7 2.5E-15 5.4E-20 157.8 22.1 230 157-419 86-453 (459)
65 TIGR03542 DAPAT_plant LL-diami 99.7 4.3E-15 9.3E-20 152.5 22.7 225 149-417 21-400 (402)
66 PRK08363 alanine aminotransfer 99.7 5.6E-15 1.2E-19 151.2 23.4 221 158-418 28-391 (398)
67 PLN02376 1-aminocyclopropane-1 99.7 6.8E-15 1.5E-19 155.9 23.8 242 141-419 21-436 (496)
68 KOG0257|consensus 99.7 7.9E-15 1.7E-19 148.8 22.0 129 139-298 12-140 (420)
69 PRK09440 avtA valine--pyruvate 99.7 1.1E-14 2.4E-19 149.7 23.2 236 153-419 23-409 (416)
70 PLN02397 aspartate transaminas 99.7 8E-16 1.7E-20 159.5 14.3 125 3-127 294-418 (423)
71 PRK05839 hypothetical protein; 99.7 2E-14 4.3E-19 146.3 23.7 225 148-419 12-372 (374)
72 PLN02368 alanine transaminase 99.6 1.6E-14 3.5E-19 149.5 19.0 195 158-383 36-404 (407)
73 TIGR03537 DapC succinyldiamino 99.6 6.5E-14 1.4E-18 141.0 22.3 208 162-417 2-346 (350)
74 PRK03317 histidinol-phosphate 99.6 1.1E-13 2.4E-18 140.1 21.6 214 161-419 27-362 (368)
75 PRK06836 aspartate aminotransf 99.6 1.3E-13 2.7E-18 141.3 22.2 215 159-419 32-389 (394)
76 PRK05387 histidinol-phosphate 99.6 1.3E-13 2.8E-18 138.2 20.4 207 160-419 24-351 (353)
77 TIGR03801 asp_4_decarbox aspar 99.6 2.8E-13 6.2E-18 144.1 20.8 105 161-295 95-204 (521)
78 PRK09105 putative aminotransfe 99.6 5.3E-13 1.2E-17 136.0 21.9 207 159-419 42-368 (370)
79 PRK04870 histidinol-phosphate 99.5 5.3E-13 1.2E-17 134.4 21.5 211 159-419 25-356 (356)
80 PRK14809 histidinol-phosphate 99.5 1E-12 2.3E-17 132.4 23.0 204 159-420 29-356 (357)
81 PRK07392 threonine-phosphate d 99.5 9E-13 2E-17 133.2 21.2 206 160-419 22-357 (360)
82 PRK01533 histidinol-phosphate 99.5 1.3E-12 2.8E-17 133.1 21.4 206 159-419 28-353 (366)
83 PRK03158 histidinol-phosphate 99.5 1.5E-12 3.2E-17 131.1 21.5 203 161-418 30-358 (359)
84 PRK07908 hypothetical protein; 99.5 4.7E-12 1E-16 127.3 24.3 209 158-419 20-345 (349)
85 PLN03026 histidinol-phosphate 99.5 3.4E-12 7.4E-17 130.5 22.1 205 159-418 51-379 (380)
86 cd00609 AAT_like Aspartate ami 99.5 8E-12 1.7E-16 122.8 21.5 215 163-417 1-350 (350)
87 PTZ00376 aspartate aminotransf 99.5 6.4E-13 1.4E-17 136.6 14.1 123 5-127 278-400 (404)
88 PRK02610 histidinol-phosphate 99.5 9.1E-12 2E-16 126.7 22.3 215 160-419 28-369 (374)
89 PRK09257 aromatic amino acid a 99.5 7.2E-13 1.6E-17 135.7 13.9 123 5-127 273-395 (396)
90 PRK08153 histidinol-phosphate 99.4 7.3E-12 1.6E-16 127.3 20.8 206 159-419 31-363 (369)
91 PRK14808 histidinol-phosphate 99.4 9.8E-12 2.1E-16 125.0 21.5 206 159-417 18-333 (335)
92 PRK14807 histidinol-phosphate 99.4 1.2E-11 2.6E-16 124.7 20.8 210 159-419 21-350 (351)
93 TIGR01141 hisC histidinol-phos 99.4 6.9E-12 1.5E-16 125.4 18.6 201 160-415 19-345 (346)
94 PRK05166 histidinol-phosphate 99.4 1.7E-11 3.7E-16 124.5 21.5 206 159-419 35-369 (371)
95 KOG0256|consensus 99.4 5.5E-12 1.2E-16 127.9 17.3 193 196-418 114-458 (471)
96 PRK13238 tnaA tryptophanase/L- 99.4 1.7E-11 3.7E-16 129.0 21.2 103 157-297 33-138 (460)
97 PRK06225 aspartate aminotransf 99.4 5.6E-11 1.2E-15 120.9 23.6 214 159-419 27-374 (380)
98 PRK02731 histidinol-phosphate 99.4 4.9E-11 1.1E-15 120.3 22.2 208 158-420 30-365 (367)
99 PRK08056 threonine-phosphate d 99.4 4E-11 8.6E-16 121.1 21.2 206 160-420 20-354 (356)
100 PLN02672 methionine S-methyltr 99.4 3.7E-11 8.1E-16 136.3 22.8 219 159-417 696-1076(1082)
101 KOG0259|consensus 99.4 1.6E-10 3.6E-15 116.4 24.5 236 145-417 42-429 (447)
102 PRK03967 histidinol-phosphate 99.4 4.8E-11 1E-15 119.9 19.9 200 160-419 18-332 (337)
103 PRK03321 putative aminotransfe 99.3 9.3E-11 2E-15 117.8 21.0 206 160-419 22-349 (352)
104 PRK00950 histidinol-phosphate 99.3 1.2E-10 2.7E-15 117.0 21.6 214 147-419 22-360 (361)
105 PRK06358 threonine-phosphate d 99.3 1.7E-10 3.7E-15 116.7 20.4 204 160-419 19-353 (354)
106 COG1168 MalY Bifunctional PLP- 99.3 4.3E-10 9.3E-15 113.7 21.4 217 159-418 24-383 (388)
107 TIGR01140 L_thr_O3P_dcar L-thr 99.2 4.6E-10 9.9E-15 112.4 18.6 208 146-415 4-329 (330)
108 PRK04635 histidinol-phosphate 99.2 9.7E-10 2.1E-14 111.0 18.9 201 160-417 31-351 (354)
109 PRK05664 threonine-phosphate d 99.2 2.1E-09 4.6E-14 107.7 19.8 193 161-418 21-325 (330)
110 KOG0634|consensus 99.1 2.3E-09 4.9E-14 109.8 18.0 195 196-418 93-463 (472)
111 PRK04781 histidinol-phosphate 99.1 2.6E-09 5.7E-14 108.6 17.0 180 196-418 53-360 (364)
112 PRK06959 putative threonine-ph 99.1 1E-08 2.2E-13 103.4 18.9 198 160-419 24-331 (339)
113 PRK08354 putative aminotransfe 99.0 2.3E-08 4.9E-13 99.4 20.3 93 160-298 8-100 (311)
114 PRK06425 histidinol-phosphate 99.0 1.3E-08 2.8E-13 102.0 16.8 82 331-419 238-331 (332)
115 cd00617 Tnase_like Tryptophana 99.0 3.4E-08 7.3E-13 103.4 19.2 104 155-297 6-113 (431)
116 COG0079 HisC Histidinol-phosph 98.9 1E-07 2.2E-12 97.5 21.3 208 160-419 22-352 (356)
117 cd00378 SHMT Serine-glycine hy 98.9 4.7E-08 1E-12 99.9 18.1 83 333-419 276-383 (402)
118 PRK01688 histidinol-phosphate 98.9 5.3E-08 1.1E-12 98.5 18.1 176 196-415 51-350 (351)
119 TIGR01822 2am3keto_CoA 2-amino 98.9 1.5E-07 3.3E-12 95.8 20.8 102 158-297 36-144 (393)
120 PRK06939 2-amino-3-ketobutyrat 98.9 1.4E-07 3E-12 95.6 20.0 80 335-419 296-391 (397)
121 PLN02994 1-aminocyclopropane-1 98.8 3.5E-08 7.7E-13 89.4 9.7 115 141-286 18-152 (153)
122 TIGR01825 gly_Cac_T_rel pyrido 98.7 1.8E-06 3.9E-11 87.5 20.2 107 158-297 31-139 (385)
123 TIGR00858 bioF 8-amino-7-oxono 98.6 2.3E-06 4.9E-11 85.2 18.9 77 333-415 266-359 (360)
124 PLN02721 threonine aldolase 98.6 2.8E-06 6.1E-11 84.7 17.6 74 342-419 264-350 (353)
125 PLN02822 serine palmitoyltrans 98.5 3.9E-06 8.5E-11 89.0 17.2 81 335-419 367-475 (481)
126 TIGR03576 pyridox_MJ0158 pyrid 98.5 1E-05 2.2E-10 82.3 19.3 78 335-420 253-346 (346)
127 PRK10534 L-threonine aldolase; 98.5 6.2E-06 1.4E-10 82.2 17.1 72 343-419 254-331 (333)
128 TIGR03392 FeS_syn_CsdA cystein 98.4 2.5E-05 5.3E-10 80.0 20.3 102 169-298 18-133 (398)
129 cd00613 GDC-P Glycine cleavage 98.4 1.7E-05 3.7E-10 80.7 18.1 105 160-296 20-129 (398)
130 PLN02483 serine palmitoyltrans 98.4 6.7E-06 1.4E-10 87.5 15.5 107 159-298 99-208 (489)
131 KOG0258|consensus 98.4 1.4E-05 3E-10 81.6 16.6 191 178-395 87-436 (475)
132 PRK10874 cysteine sulfinate de 98.4 3.6E-05 7.7E-10 78.9 19.7 99 169-298 21-136 (401)
133 TIGR01979 sufS cysteine desulf 98.4 4.8E-05 1E-09 77.8 20.5 83 334-419 293-399 (403)
134 cd06451 AGAT_like Alanine-glyo 98.4 3.3E-05 7.2E-10 77.4 18.9 83 334-420 257-356 (356)
135 TIGR00707 argD acetylornithine 98.3 2.7E-05 5.9E-10 78.7 18.0 83 336-419 290-379 (379)
136 PRK05958 8-amino-7-oxononanoat 98.3 4E-05 8.7E-10 77.2 18.0 79 335-419 290-385 (385)
137 TIGR03403 nifS_epsilon cystein 98.3 4.3E-05 9.4E-10 77.8 17.7 105 169-298 1-116 (382)
138 cd06454 KBL_like KBL_like; thi 98.2 0.0001 2.3E-09 73.2 19.5 80 334-418 252-348 (349)
139 PRK09295 bifunctional cysteine 98.2 0.00013 2.7E-09 75.2 20.3 84 333-419 298-402 (406)
140 PRK00451 glycine dehydrogenase 98.2 0.00034 7.4E-09 72.9 22.4 82 332-419 348-446 (447)
141 TIGR01977 am_tr_V_EF2568 cyste 98.2 0.00018 3.8E-09 72.7 19.6 91 170-290 2-101 (376)
142 TIGR03301 PhnW-AepZ 2-aminoeth 98.2 0.00015 3.3E-09 72.1 18.4 82 334-419 257-355 (355)
143 TIGR03402 FeS_nifS cysteine de 98.1 0.00036 7.9E-09 70.8 19.7 94 169-292 1-103 (379)
144 PRK02948 cysteine desulfurase; 98.1 0.00022 4.8E-09 72.5 17.7 83 332-419 253-372 (381)
145 cd06453 SufS_like Cysteine des 98.0 0.0003 6.6E-09 71.0 18.2 98 170-298 2-115 (373)
146 PRK00011 glyA serine hydroxyme 98.0 0.00062 1.3E-08 70.2 20.7 83 333-419 280-387 (416)
147 cd06450 DOPA_deC_like DOPA dec 98.0 0.00037 8.1E-09 69.4 17.7 96 177-298 9-118 (345)
148 PRK13392 5-aminolevulinate syn 98.0 0.00054 1.2E-08 70.6 19.4 80 336-419 300-395 (410)
149 cd06502 TA_like Low-specificit 98.0 0.00037 7.9E-09 69.1 17.1 81 172-288 4-84 (338)
150 TIGR01976 am_tr_V_VC1184 cyste 98.0 0.00057 1.2E-08 69.7 18.7 101 169-298 19-131 (397)
151 PRK02627 acetylornithine amino 98.0 0.00049 1.1E-08 70.1 18.0 53 366-419 332-392 (396)
152 PF00155 Aminotran_1_2: Aminot 97.9 3.2E-05 6.9E-10 77.6 8.3 113 3-124 239-363 (363)
153 PRK08637 hypothetical protein; 97.8 0.00024 5.2E-09 72.8 12.8 113 11-127 263-383 (388)
154 PRK13520 L-tyrosine decarboxyl 97.8 0.0057 1.2E-07 61.5 22.3 83 333-420 280-370 (371)
155 PRK01278 argD acetylornithine 97.8 0.0011 2.3E-08 67.9 16.7 84 329-419 295-386 (389)
156 PLN02855 Bifunctional selenocy 97.8 0.00095 2.1E-08 69.1 16.4 83 333-419 306-416 (424)
157 COG3977 Alanine-alpha-ketoisov 97.7 0.0024 5.3E-08 63.7 17.6 238 147-417 16-411 (417)
158 TIGR01437 selA_rel uncharacter 97.7 0.0012 2.7E-08 67.4 16.1 97 160-298 8-126 (363)
159 TIGR02326 transamin_PhnW 2-ami 97.7 0.0015 3.3E-08 65.9 16.1 81 334-419 262-360 (363)
160 TIGR00713 hemL glutamate-1-sem 97.6 0.0026 5.6E-08 66.0 17.6 98 158-288 46-143 (423)
161 cd00610 OAT_like Acetyl ornith 97.6 0.0037 8E-08 63.9 18.4 83 336-419 313-413 (413)
162 PRK03244 argD acetylornithine 97.6 0.0051 1.1E-07 63.1 18.3 80 337-419 304-392 (398)
163 PLN02409 serine--glyoxylate am 97.5 0.0084 1.8E-07 62.0 19.8 83 333-419 270-370 (401)
164 PRK07179 hypothetical protein; 97.5 0.0048 1.1E-07 63.6 17.7 80 334-419 301-396 (407)
165 PRK13479 2-aminoethylphosphona 97.5 0.0088 1.9E-07 60.4 19.2 81 334-419 263-361 (368)
166 TIGR02539 SepCysS Sep-tRNA:Cys 97.5 0.0068 1.5E-07 61.8 18.4 84 331-419 264-366 (370)
167 cd00609 AAT_like Aspartate ami 97.5 0.00075 1.6E-08 66.3 10.9 113 4-126 224-350 (350)
168 TIGR03812 tyr_de_CO2_Arch tyro 97.5 0.019 4.2E-07 57.8 20.9 80 333-417 285-372 (373)
169 PRK02936 argD acetylornithine 97.5 0.011 2.5E-07 59.9 19.2 79 339-419 290-377 (377)
170 PF12897 Aminotran_MocR: Alani 97.5 0.0062 1.3E-07 62.8 16.8 74 195-298 60-147 (425)
171 TIGR02006 IscS cysteine desulf 97.4 0.013 2.8E-07 60.4 19.4 95 169-292 5-109 (402)
172 PRK04366 glycine dehydrogenase 97.3 0.022 4.7E-07 60.7 19.6 107 161-298 69-184 (481)
173 PRK06108 aspartate aminotransf 97.3 0.002 4.4E-08 65.2 11.3 111 6-126 253-378 (382)
174 PLN03227 serine palmitoyltrans 97.3 0.012 2.6E-07 60.8 16.8 61 199-292 39-99 (392)
175 PRK09331 Sep-tRNA:Cys-tRNA syn 97.3 0.015 3.2E-07 59.8 17.3 76 339-419 283-379 (387)
176 TIGR01821 5aminolev_synth 5-am 97.2 0.03 6.5E-07 57.5 18.9 81 335-419 298-394 (402)
177 COG1104 NifS Cysteine sulfinat 97.2 0.029 6.2E-07 58.2 18.0 89 331-419 255-375 (386)
178 PRK04260 acetylornithine amino 97.1 0.048 1E-06 55.5 19.5 101 311-419 268-375 (375)
179 COG0520 csdA Selenocysteine ly 97.1 0.05 1.1E-06 56.9 19.8 83 334-419 298-403 (405)
180 PRK09064 5-aminolevulinate syn 97.1 0.044 9.6E-07 56.3 18.7 81 335-419 299-395 (407)
181 PRK14012 cysteine desulfurase; 97.1 0.044 9.5E-07 56.4 18.7 97 168-293 4-112 (404)
182 PRK13393 5-aminolevulinate syn 97.1 0.071 1.5E-06 55.0 20.2 78 338-419 301-394 (406)
183 COG0075 Serine-pyruvate aminot 96.9 0.052 1.1E-06 56.3 17.3 106 304-419 238-361 (383)
184 PRK07550 hypothetical protein; 96.9 0.0089 1.9E-07 61.0 11.7 113 5-127 256-384 (386)
185 TIGR01264 tyr_amTase_E tyrosin 96.9 0.008 1.7E-07 61.8 10.9 82 15-104 275-366 (401)
186 PLN02607 1-aminocyclopropane-1 96.8 0.01 2.2E-07 62.6 11.9 107 13-126 306-433 (447)
187 PRK15481 transcriptional regul 96.8 0.011 2.4E-07 61.5 11.5 103 16-127 312-428 (431)
188 PRK00062 glutamate-1-semialdeh 96.8 0.061 1.3E-06 56.2 16.7 99 158-289 48-146 (426)
189 PRK05957 aspartate aminotransf 96.7 0.014 3E-07 59.8 11.5 106 4-118 252-373 (389)
190 PRK12381 bifunctional succinyl 96.7 0.082 1.8E-06 54.8 17.2 84 336-419 303-397 (406)
191 TIGR03235 DNA_S_dndA cysteine 96.7 0.13 2.8E-06 51.8 17.8 93 170-291 1-104 (353)
192 PRK13034 serine hydroxymethylt 96.7 0.13 2.9E-06 53.6 18.3 80 336-419 286-390 (416)
193 cd06452 SepCysS Sep-tRNA:Cys-t 96.5 0.29 6.3E-06 49.4 19.2 40 379-419 316-360 (361)
194 PLN02271 serine hydroxymethylt 96.4 0.25 5.5E-06 53.7 19.0 85 332-420 431-539 (586)
195 PRK08088 4-aminobutyrate amino 96.3 0.3 6.5E-06 50.9 18.6 102 309-419 300-421 (425)
196 PLN02242 methionine gamma-lyas 96.3 0.092 2E-06 55.0 14.4 38 252-292 95-132 (418)
197 PRK08247 cystathionine gamma-s 96.3 0.12 2.5E-06 53.0 14.8 35 252-290 71-105 (366)
198 PF00266 Aminotran_5: Aminotra 96.2 0.29 6.2E-06 49.6 17.1 92 170-289 2-102 (371)
199 PLN02450 1-aminocyclopropane-1 96.2 0.048 1E-06 57.8 11.8 107 14-127 300-427 (468)
200 PRK06234 methionine gamma-lyas 96.1 0.017 3.7E-07 59.9 7.7 69 197-298 56-130 (400)
201 TIGR03588 PseC UDP-4-keto-6-de 96.1 0.022 4.7E-07 58.2 8.3 68 199-298 25-92 (380)
202 PRK11658 UDP-4-amino-4-deoxy-L 96.0 0.021 4.6E-07 58.6 8.1 63 204-298 34-96 (379)
203 PRK05764 aspartate aminotransf 96.0 0.069 1.5E-06 54.4 11.7 114 4-127 257-388 (393)
204 PRK07681 aspartate aminotransf 96.0 0.07 1.5E-06 54.8 11.7 104 17-131 271-389 (399)
205 PRK07582 cystathionine gamma-l 95.9 0.44 9.5E-06 48.8 17.2 59 201-293 49-107 (366)
206 PRK05093 argD bifunctional N-s 95.9 0.031 6.8E-07 57.6 8.8 83 336-419 304-398 (403)
207 COG0112 GlyA Glycine/serine hy 95.9 0.49 1.1E-05 49.2 16.9 84 332-420 280-389 (413)
208 PLN02651 cysteine desulfurase 95.8 0.63 1.4E-05 47.1 17.7 91 170-292 2-105 (364)
209 PTZ00377 alanine aminotransfer 95.8 0.088 1.9E-06 55.8 11.7 117 5-126 323-471 (481)
210 PRK07865 N-succinyldiaminopime 95.7 0.11 2.4E-06 52.6 11.5 107 6-124 244-362 (364)
211 PRK09105 putative aminotransfe 95.7 0.11 2.4E-06 53.1 11.6 100 14-127 259-367 (370)
212 PRK07682 hypothetical protein; 95.6 0.12 2.6E-06 52.5 11.6 110 6-126 247-372 (378)
213 PRK15407 lipopolysaccharide bi 95.5 0.029 6.3E-07 59.1 6.8 63 205-298 65-134 (438)
214 PRK08068 transaminase; Reviewe 95.4 0.16 3.4E-06 52.0 11.4 108 5-127 260-383 (389)
215 PLN03226 serine hydroxymethylt 95.3 1.6 3.5E-05 46.6 19.0 83 334-420 312-418 (475)
216 PRK09148 aminotransferase; Val 95.1 0.21 4.6E-06 51.6 11.7 109 5-127 258-384 (405)
217 PRK09440 avtA valine--pyruvate 95.1 0.25 5.5E-06 50.9 12.1 116 7-127 270-408 (416)
218 PTZ00433 tyrosine aminotransfe 95.1 0.18 4E-06 52.1 11.0 81 17-105 286-376 (412)
219 PRK11706 TDP-4-oxo-6-deoxy-D-g 94.9 0.051 1.1E-06 55.6 6.2 45 252-298 50-94 (375)
220 PLN02231 alanine transaminase 94.8 0.35 7.5E-06 52.4 12.7 87 14-103 383-490 (534)
221 PLN00144 acetylornithine trans 94.6 0.18 3.9E-06 52.0 9.3 104 304-419 264-378 (382)
222 PRK13580 serine hydroxymethylt 94.5 1.6 3.6E-05 46.9 16.5 81 335-419 338-443 (493)
223 PRK07324 transaminase; Validat 94.5 0.34 7.4E-06 49.5 11.1 97 16-125 253-362 (373)
224 PRK04073 rocD ornithine--oxo-a 94.5 0.26 5.6E-06 50.7 10.2 80 337-419 308-395 (396)
225 TIGR03539 DapC_actino succinyl 94.4 0.4 8.6E-06 48.5 11.4 104 6-124 238-353 (357)
226 PRK09028 cystathionine beta-ly 94.3 0.12 2.7E-06 53.8 7.5 64 196-292 52-117 (394)
227 PRK08175 aminotransferase; Val 94.3 0.45 9.7E-06 48.8 11.5 73 22-104 274-354 (395)
228 TIGR01366 serC_3 phosphoserine 94.2 0.41 8.8E-06 49.0 11.0 82 334-419 259-358 (361)
229 PRK09276 LL-diaminopimelate am 94.1 0.54 1.2E-05 47.8 11.7 96 18-127 272-382 (385)
230 PRK07050 cystathionine beta-ly 94.0 0.13 2.9E-06 53.3 7.1 44 252-298 84-131 (394)
231 PRK09082 methionine aminotrans 94.0 0.5 1.1E-05 48.3 11.1 88 7-104 258-352 (386)
232 TIGR02379 ECA_wecE TDP-4-keto- 94.0 0.21 4.7E-06 51.4 8.4 45 252-298 50-94 (376)
233 PRK06855 aminotransferase; Val 93.9 0.55 1.2E-05 49.1 11.4 103 16-125 281-424 (433)
234 PRK08636 aspartate aminotransf 93.8 0.65 1.4E-05 47.8 11.6 76 43-126 300-393 (403)
235 cd01494 AAT_I Aspartate aminot 93.7 0.17 3.8E-06 43.9 6.3 44 252-298 21-65 (170)
236 PRK08153 histidinol-phosphate 93.7 0.52 1.1E-05 48.0 10.6 98 17-128 253-363 (369)
237 PTZ00125 ornithine aminotransf 93.6 0.29 6.3E-06 50.0 8.6 79 339-419 302-393 (400)
238 PRK05387 histidinol-phosphate 93.5 0.78 1.7E-05 45.9 11.3 95 18-127 244-350 (353)
239 PRK07777 aminotransferase; Val 93.4 0.78 1.7E-05 46.8 11.4 71 23-103 270-347 (387)
240 PTZ00094 serine hydroxymethylt 93.3 0.3 6.5E-06 51.5 8.3 83 333-419 300-406 (452)
241 PLN02376 1-aminocyclopropane-1 93.2 0.74 1.6E-05 49.3 11.2 96 14-117 307-425 (496)
242 PRK07366 succinyldiaminopimela 92.9 0.91 2E-05 46.3 11.0 59 41-103 289-354 (388)
243 PRK04870 histidinol-phosphate 92.9 0.9 2E-05 45.7 10.7 98 17-127 247-355 (356)
244 PRK00854 rocD ornithine--oxo-a 92.8 0.57 1.2E-05 48.0 9.4 82 337-420 309-400 (401)
245 PRK08912 hypothetical protein; 92.7 1.1 2.3E-05 45.8 11.2 79 14-103 262-348 (387)
246 PRK05942 aspartate aminotransf 92.7 1.3 2.8E-05 45.4 11.8 108 6-127 264-386 (394)
247 PRK03317 histidinol-phosphate 92.7 0.96 2.1E-05 45.8 10.7 101 13-127 255-361 (368)
248 cd00378 SHMT Serine-glycine hy 92.7 0.82 1.8E-05 46.7 10.2 83 42-128 276-383 (402)
249 PRK06348 aspartate aminotransf 92.7 1.1 2.4E-05 45.7 11.2 89 6-103 255-349 (384)
250 cd00616 AHBA_syn 3-amino-5-hyd 92.3 0.31 6.8E-06 48.4 6.5 65 202-298 17-81 (352)
251 TIGR00700 GABAtrnsam 4-aminobu 92.3 0.45 9.8E-06 49.6 8.0 55 366-420 347-419 (420)
252 PRK06777 4-aminobutyrate amino 92.3 0.68 1.5E-05 48.4 9.3 85 335-419 317-419 (421)
253 PRK07309 aromatic amino acid a 92.3 1.3 2.8E-05 45.4 11.1 98 16-124 268-382 (391)
254 PRK09265 aminotransferase AlaT 92.1 1.5 3.2E-05 45.2 11.4 104 14-125 274-396 (404)
255 TIGR03538 DapC_gpp succinyldia 92.1 1.5 3.2E-05 44.9 11.3 75 17-103 276-353 (393)
256 TIGR01979 sufS cysteine desulf 92.1 1.4 3E-05 45.0 11.1 82 43-127 293-398 (403)
257 TIGR03540 DapC_direct LL-diami 92.1 1.4 3.1E-05 44.7 11.1 71 23-103 275-350 (383)
258 PLN02414 glycine dehydrogenase 92.0 30 0.00065 40.6 26.4 77 334-416 380-464 (993)
259 PRK06290 aspartate aminotransf 92.0 1.1 2.4E-05 46.6 10.3 110 7-127 273-402 (410)
260 PRK06207 aspartate aminotransf 92.0 1.4 3.1E-05 45.5 11.1 89 6-103 272-366 (405)
261 PRK07590 L,L-diaminopimelate a 92.0 1.6 3.4E-05 45.1 11.4 83 12-103 288-375 (409)
262 PRK06107 aspartate aminotransf 91.9 1.7 3.7E-05 44.7 11.6 90 6-104 262-367 (402)
263 PRK05939 hypothetical protein; 91.8 0.61 1.3E-05 48.5 8.2 68 197-298 39-112 (397)
264 PRK04635 histidinol-phosphate 91.8 1.2 2.6E-05 44.9 10.1 103 13-127 241-352 (354)
265 PRK06836 aspartate aminotransf 91.8 1.4 3.1E-05 45.2 10.8 87 15-117 281-378 (394)
266 PRK07683 aminotransferase A; V 91.7 1.6 3.5E-05 44.7 11.0 87 7-103 255-347 (387)
267 PRK08363 alanine aminotransfer 91.5 1.4 3.1E-05 45.1 10.4 77 18-103 275-358 (398)
268 PRK07811 cystathionine gamma-s 91.4 0.49 1.1E-05 48.9 6.9 59 197-288 53-113 (388)
269 PRK05367 glycine dehydrogenase 91.4 32 0.00068 40.2 22.0 81 332-416 350-437 (954)
270 PRK08960 hypothetical protein; 91.4 2.1 4.6E-05 43.7 11.5 109 6-127 255-381 (387)
271 PRK07503 methionine gamma-lyas 91.2 0.68 1.5E-05 48.2 7.7 44 252-298 84-131 (403)
272 PLN00175 aminotransferase fami 91.2 1.8 3.9E-05 45.0 10.9 98 17-125 291-408 (413)
273 cd06454 KBL_like KBL_like; thi 91.2 0.98 2.1E-05 44.8 8.6 81 43-128 252-349 (349)
274 TIGR01977 am_tr_V_EF2568 cyste 91.1 2 4.4E-05 43.2 10.9 106 12-126 242-375 (376)
275 PRK05967 cystathionine beta-ly 91.1 0.59 1.3E-05 48.8 7.1 44 252-298 83-130 (395)
276 PRK08361 aspartate aminotransf 91.1 1.9 4.2E-05 44.0 10.8 81 16-103 268-354 (391)
277 TIGR03246 arg_catab_astC succi 91.0 0.74 1.6E-05 47.5 7.7 82 336-419 299-393 (397)
278 PRK05367 glycine dehydrogenase 90.9 13 0.00027 43.5 18.2 81 42-125 351-437 (954)
279 PRK06767 methionine gamma-lyas 90.8 0.7 1.5E-05 47.7 7.4 60 201-293 59-118 (386)
280 PRK07049 methionine gamma-lyas 90.8 0.68 1.5E-05 48.6 7.4 44 252-298 102-149 (427)
281 PRK04260 acetylornithine amino 90.8 1 2.3E-05 45.8 8.5 104 15-127 264-374 (375)
282 TIGR01324 cysta_beta_ly_B cyst 90.6 0.68 1.5E-05 47.8 7.1 62 195-290 40-104 (377)
283 PRK08133 O-succinylhomoserine 90.5 0.83 1.8E-05 47.2 7.6 89 177-298 33-127 (390)
284 TIGR01141 hisC histidinol-phos 90.5 2.3 4.9E-05 42.4 10.5 90 22-124 245-345 (346)
285 TIGR01885 Orn_aminotrans ornit 90.5 1.4 3.1E-05 45.3 9.3 80 337-419 308-400 (401)
286 TIGR01265 tyr_nico_aTase tyros 90.5 2.3 4.9E-05 43.8 10.8 82 15-104 277-368 (403)
287 PRK02731 histidinol-phosphate 90.4 2.9 6.4E-05 42.1 11.4 94 19-127 257-363 (367)
288 COG0436 Aspartate/tyrosine/aro 90.2 2.7 5.8E-05 43.8 11.1 93 5-104 257-355 (393)
289 PRK07337 aminotransferase; Val 90.2 2.8 6.1E-05 42.7 11.1 108 7-126 254-382 (388)
290 COG0399 WecE Predicted pyridox 90.2 0.4 8.6E-06 49.8 4.9 45 252-298 53-97 (374)
291 TIGR01814 kynureninase kynuren 90.1 2.6 5.7E-05 43.4 10.8 108 305-419 283-405 (406)
292 PRK12414 putative aminotransfe 89.9 4.1 9E-05 41.6 12.1 98 16-128 266-382 (384)
293 PRK06918 4-aminobutyrate amino 89.8 1.3 2.9E-05 46.6 8.6 34 386-419 401-441 (451)
294 COG1103 Archaea-specific pyrid 89.7 6.9 0.00015 39.3 12.6 93 310-419 258-378 (382)
295 TIGR03542 DAPAT_plant LL-diami 89.6 2.9 6.3E-05 43.0 10.8 81 14-103 283-368 (402)
296 PLN03026 histidinol-phosphate 89.6 2.6 5.6E-05 43.2 10.2 99 14-127 268-379 (380)
297 PRK08056 threonine-phosphate d 89.5 2.4 5.2E-05 42.8 9.9 100 14-127 240-352 (356)
298 PRK13392 5-aminolevulinate syn 89.4 2.4 5.2E-05 43.7 10.0 80 45-128 300-395 (410)
299 PRK07908 hypothetical protein; 89.4 2 4.4E-05 43.1 9.3 81 41-127 253-344 (349)
300 PRK08045 cystathionine gamma-s 89.3 0.68 1.5E-05 48.0 5.8 56 201-289 50-105 (386)
301 PRK02936 argD acetylornithine 89.3 2.1 4.6E-05 43.4 9.4 52 76-127 318-376 (377)
302 PRK09064 5-aminolevulinate syn 89.3 2.7 5.9E-05 43.1 10.2 83 41-127 296-394 (407)
303 PF00464 SHMT: Serine hydroxym 89.3 3 6.4E-05 43.8 10.5 107 147-288 8-123 (399)
304 PRK08574 cystathionine gamma-s 89.2 0.9 2E-05 47.0 6.6 58 203-293 53-110 (385)
305 PF01041 DegT_DnrJ_EryC1: DegT 89.2 0.62 1.3E-05 47.5 5.3 45 252-298 44-88 (363)
306 cd06450 DOPA_deC_like DOPA dec 89.1 2.4 5.2E-05 42.0 9.4 83 41-126 244-344 (345)
307 TIGR00707 argD acetylornithine 89.0 1.8 4E-05 43.6 8.6 81 46-127 291-378 (379)
308 cd00615 Orn_deC_like Ornithine 89.0 0.77 1.7E-05 45.3 5.8 44 252-298 79-122 (294)
309 PLN02656 tyrosine transaminase 89.0 3.8 8.3E-05 42.3 11.1 101 15-127 278-397 (409)
310 PRK10874 cysteine sulfinate de 88.9 3.4 7.4E-05 42.3 10.6 82 43-127 294-395 (401)
311 PRK08249 cystathionine gamma-s 88.9 0.88 1.9E-05 47.3 6.3 38 252-292 83-120 (398)
312 TIGR03537 DapC succinyldiamino 88.8 4 8.7E-05 41.0 10.9 87 5-103 226-317 (350)
313 PRK00011 glyA serine hydroxyme 88.8 4.2 9.1E-05 41.9 11.3 85 42-130 280-389 (416)
314 PRK05093 argD bifunctional N-s 88.8 1.6 3.4E-05 45.1 8.1 80 47-127 306-397 (403)
315 TIGR02407 ectoine_ectB diamino 88.5 2.1 4.6E-05 44.6 8.9 85 330-420 316-411 (412)
316 PRK06959 putative threonine-ph 88.4 4.5 9.8E-05 40.8 11.0 100 12-127 224-330 (339)
317 TIGR01328 met_gam_lyase methio 88.4 1.3 2.9E-05 45.8 7.2 38 252-292 78-115 (391)
318 PLN02509 cystathionine beta-ly 88.3 1.6 3.5E-05 46.6 7.9 72 195-298 123-198 (464)
319 cd06453 SufS_like Cysteine des 88.2 2.5 5.4E-05 42.5 8.9 79 42-124 272-373 (373)
320 TIGR01364 serC_1 phosphoserine 88.1 3.9 8.4E-05 41.8 10.3 108 305-419 224-346 (349)
321 KOG0633|consensus 88.1 7.9 0.00017 38.7 11.8 99 310-417 259-373 (375)
322 PRK00950 histidinol-phosphate 87.9 3.6 7.8E-05 41.2 9.9 92 18-127 254-359 (361)
323 TIGR02080 O_succ_thio_ly O-suc 87.7 1.1 2.4E-05 46.2 6.2 36 252-290 70-105 (382)
324 TIGR01366 serC_3 phosphoserine 87.6 4.4 9.5E-05 41.4 10.4 107 14-127 234-357 (361)
325 PRK03158 histidinol-phosphate 87.6 5.9 0.00013 39.8 11.2 96 17-127 252-358 (359)
326 cd00614 CGS_like CGS_like: Cys 87.5 1.6 3.5E-05 44.6 7.1 63 196-291 31-95 (369)
327 PRK08776 cystathionine gamma-s 87.3 1.4 3E-05 46.0 6.6 33 252-287 79-111 (405)
328 PRK09147 succinyldiaminopimela 87.2 7.2 0.00016 39.9 11.7 75 17-103 277-354 (396)
329 PLN02624 ornithine-delta-amino 87.0 3.1 6.7E-05 44.3 9.2 40 379-419 398-442 (474)
330 PRK09295 bifunctional cysteine 86.9 4.5 9.7E-05 41.6 10.1 83 42-127 298-401 (406)
331 PTZ00094 serine hydroxymethylt 86.8 2.7 5.9E-05 44.2 8.6 87 41-131 299-409 (452)
332 COG1167 ARO8 Transcriptional r 86.1 6.2 0.00013 41.9 10.8 117 6-127 319-452 (459)
333 PRK14807 histidinol-phosphate 86.0 5.8 0.00013 40.0 10.2 97 17-127 243-349 (351)
334 PLN02187 rooty/superroot1 86.0 4.4 9.6E-05 42.9 9.7 98 17-122 315-430 (462)
335 PRK04612 argD acetylornithine 85.9 4 8.8E-05 42.6 9.2 83 337-419 308-401 (408)
336 PRK05968 hypothetical protein; 85.8 3.1 6.8E-05 43.0 8.2 44 252-298 82-129 (389)
337 TIGR03392 FeS_syn_CsdA cystein 85.8 6.3 0.00014 40.3 10.4 82 43-127 291-392 (398)
338 COG0001 HemL Glutamate-1-semia 85.7 28 0.0006 37.0 15.0 76 339-419 330-426 (432)
339 PRK07810 O-succinylhomoserine 85.7 1.7 3.7E-05 45.2 6.3 44 252-298 89-136 (403)
340 TIGR01325 O_suc_HS_sulf O-succ 85.6 2.8 6E-05 43.1 7.7 34 252-288 73-106 (380)
341 PRK09264 diaminobutyrate--2-ox 85.5 3.7 8E-05 42.9 8.7 81 339-419 322-414 (425)
342 PLN02822 serine palmitoyltrans 85.5 3.9 8.6E-05 43.6 9.0 81 44-127 367-474 (481)
343 PRK05355 3-phosphoserine/phosp 85.5 7.4 0.00016 39.8 10.7 108 305-419 235-356 (360)
344 TIGR03301 PhnW-AepZ 2-aminoeth 85.4 4.1 8.9E-05 40.3 8.7 81 43-127 257-354 (355)
345 PRK06702 O-acetylhomoserine am 85.4 1.8 3.8E-05 45.8 6.2 44 252-298 80-127 (432)
346 PRK06058 4-aminobutyrate amino 85.4 2.5 5.4E-05 44.5 7.4 84 336-420 339-441 (443)
347 PRK04311 selenocysteine syntha 85.3 3.5 7.5E-05 44.0 8.5 92 160-285 79-175 (464)
348 TIGR01140 L_thr_O3P_dcar L-thr 85.2 4.4 9.5E-05 40.5 8.8 91 20-124 227-329 (330)
349 PRK08134 O-acetylhomoserine am 85.1 2.7 5.8E-05 44.4 7.4 38 252-292 83-120 (433)
350 PRK13520 L-tyrosine decarboxyl 85.0 4.7 0.0001 40.4 9.0 85 38-127 276-368 (371)
351 cd00610 OAT_like Acetyl ornith 85.0 3.7 8E-05 41.9 8.3 81 45-127 313-412 (413)
352 PRK03967 histidinol-phosphate 85.0 5.4 0.00012 40.0 9.3 91 17-127 234-331 (337)
353 PRK03080 phosphoserine aminotr 84.8 5.3 0.00011 41.0 9.3 84 43-127 270-370 (378)
354 PLN00145 tyrosine/nicotianamin 84.5 8.5 0.00018 40.3 10.9 102 14-127 298-418 (430)
355 TIGR01814 kynureninase kynuren 84.5 6.4 0.00014 40.5 9.8 107 15-127 284-404 (406)
356 PRK14809 histidinol-phosphate 84.4 9.3 0.0002 38.4 10.8 92 17-126 252-353 (357)
357 TIGR00858 bioF 8-amino-7-oxono 84.4 7.9 0.00017 38.3 10.2 78 41-124 265-359 (360)
358 PRK04781 histidinol-phosphate 84.4 8.2 0.00018 39.2 10.4 98 20-127 253-360 (364)
359 TIGR01365 serC_2 phosphoserine 84.3 11 0.00024 39.1 11.5 106 304-418 235-370 (374)
360 PLN02721 threonine aldolase 84.2 9.8 0.00021 37.7 10.7 73 51-127 264-349 (353)
361 PRK05664 threonine-phosphate d 84.2 12 0.00026 37.5 11.3 93 20-127 225-325 (330)
362 PLN02672 methionine S-methyltr 84.0 8.6 0.00019 45.2 11.4 85 37-126 962-1076(1082)
363 PRK01688 histidinol-phosphate 83.9 7.2 0.00016 39.4 9.7 92 22-124 248-350 (351)
364 PRK12381 bifunctional succinyl 83.8 4 8.6E-05 42.3 8.0 82 45-127 303-396 (406)
365 PRK02948 cysteine desulfurase; 83.7 9.8 0.00021 38.5 10.7 83 42-127 254-371 (381)
366 PLN02452 phosphoserine transam 83.7 8 0.00017 39.9 10.1 105 303-417 237-359 (365)
367 TIGR01821 5aminolev_synth 5-am 83.6 4.8 0.0001 41.3 8.5 80 44-127 298-393 (402)
368 PRK08117 4-aminobutyrate amino 83.6 3.7 8.1E-05 42.9 7.7 40 380-419 381-427 (433)
369 PRK06460 hypothetical protein; 83.6 1.5 3.3E-05 45.1 4.7 69 197-298 37-111 (376)
370 PRK13355 bifunctional HTH-doma 83.5 10 0.00022 40.6 11.2 81 16-103 389-478 (517)
371 PRK05958 8-amino-7-oxononanoat 83.0 6.3 0.00014 39.5 8.9 78 44-127 290-384 (385)
372 PLN02368 alanine transaminase 82.9 6.4 0.00014 41.1 9.1 75 15-92 324-404 (407)
373 PRK07568 aspartate aminotransf 82.6 13 0.00029 37.7 11.2 78 17-103 267-353 (397)
374 PLN00144 acetylornithine trans 82.2 5.4 0.00012 41.1 8.2 103 13-127 264-377 (382)
375 COG0156 BioF 7-keto-8-aminopel 82.2 11 0.00025 39.3 10.5 79 335-418 293-387 (388)
376 TIGR02326 transamin_PhnW 2-ami 81.8 9.8 0.00021 38.2 9.8 80 43-127 262-359 (363)
377 PRK05166 histidinol-phosphate 81.8 14 0.00029 37.6 10.8 96 17-127 262-368 (371)
378 PRK08861 cystathionine gamma-s 81.6 2.8 6.1E-05 43.5 5.9 34 252-288 72-105 (388)
379 PRK03080 phosphoserine aminotr 81.6 16 0.00035 37.4 11.4 85 334-419 270-371 (378)
380 cd06451 AGAT_like Alanine-glyo 81.5 8.3 0.00018 38.5 9.1 81 43-127 257-354 (356)
381 TIGR00474 selA seryl-tRNA(sec) 81.1 5.7 0.00012 42.3 8.0 92 161-286 75-171 (454)
382 PRK07504 O-succinylhomoserine 81.0 3.4 7.4E-05 42.9 6.2 38 253-293 85-122 (398)
383 PRK07671 cystathionine beta-ly 80.6 3.5 7.6E-05 42.5 6.2 35 252-290 69-104 (377)
384 TIGR00461 gcvP glycine dehydro 80.6 1.1E+02 0.0024 35.7 18.5 221 41-298 338-601 (939)
385 PRK01533 histidinol-phosphate 80.5 17 0.00038 37.0 11.2 107 12-133 248-358 (366)
386 PLN00143 tyrosine/nicotianamin 80.5 18 0.0004 37.3 11.4 86 18-110 282-385 (409)
387 PRK08064 cystathionine beta-ly 80.4 3.9 8.5E-05 42.3 6.4 34 252-289 73-106 (390)
388 PRK08248 O-acetylhomoserine am 80.2 6.2 0.00014 41.6 7.9 44 252-298 83-130 (431)
389 cd00617 Tnase_like Tryptophana 80.1 5 0.00011 42.4 7.2 80 44-128 291-406 (431)
390 cd00611 PSAT_like Phosphoserin 80.0 17 0.00037 36.8 10.9 106 306-419 233-354 (355)
391 PRK06176 cystathionine gamma-s 79.9 3.4 7.4E-05 42.7 5.7 36 252-291 69-104 (380)
392 TIGR01329 cysta_beta_ly_E cyst 79.8 4.7 0.0001 41.5 6.7 37 252-292 66-102 (378)
393 TIGR03403 nifS_epsilon cystein 79.5 14 0.00031 37.4 10.2 57 43-102 257-319 (382)
394 PRK02627 acetylornithine amino 79.5 6.6 0.00014 39.9 7.7 51 76-127 333-391 (396)
395 PRK06084 O-acetylhomoserine am 79.4 6.5 0.00014 41.3 7.7 35 252-289 77-111 (425)
396 PRK05769 4-aminobutyrate amino 79.2 7.9 0.00017 40.8 8.3 82 337-419 340-437 (441)
397 PLN02483 serine palmitoyltrans 79.0 7.9 0.00017 41.4 8.3 89 44-137 368-474 (489)
398 PRK03244 argD acetylornithine 78.5 8.7 0.00019 39.3 8.2 78 47-127 305-391 (398)
399 PRK05937 8-amino-7-oxononanoat 78.5 11 0.00023 38.5 8.8 76 336-419 265-348 (370)
400 PRK09792 4-aminobutyrate trans 78.3 11 0.00024 39.4 9.0 53 367-420 349-420 (421)
401 PRK10534 L-threonine aldolase; 78.3 21 0.00046 35.3 10.8 73 50-127 252-330 (333)
402 PRK03321 putative aminotransfe 78.3 31 0.00067 34.5 12.0 92 21-127 250-348 (352)
403 PRK07269 cystathionine gamma-s 78.0 5.2 0.00011 41.1 6.4 58 201-292 52-109 (364)
404 PLN02855 Bifunctional selenocy 77.9 14 0.00031 38.2 9.6 86 42-127 306-415 (424)
405 PRK04073 rocD ornithine--oxo-a 77.8 12 0.00026 38.5 9.0 79 47-128 309-395 (396)
406 PRK09275 aspartate aminotransf 77.5 12 0.00025 40.8 9.1 80 43-127 405-514 (527)
407 TIGR01822 2am3keto_CoA 2-amino 77.2 18 0.00038 36.7 10.0 83 41-128 289-387 (393)
408 COG0520 csdA Selenocysteine ly 76.4 11 0.00024 39.5 8.3 83 43-128 298-403 (405)
409 PRK06225 aspartate aminotransf 76.2 34 0.00075 34.6 11.8 99 20-127 259-373 (380)
410 TIGR00700 GABAtrnsam 4-aminobu 76.0 9.4 0.0002 39.8 7.8 53 75-127 347-417 (420)
411 PRK09264 diaminobutyrate--2-ox 75.6 6.3 0.00014 41.2 6.3 82 46-127 320-413 (425)
412 PLN02414 glycine dehydrogenase 75.4 1.4E+02 0.0031 35.1 17.6 82 42-127 379-466 (993)
413 PRK13393 5-aminolevulinate syn 75.2 19 0.00041 37.0 9.7 77 47-127 301-393 (406)
414 PRK05355 3-phosphoserine/phosp 75.1 24 0.00053 36.1 10.3 106 14-127 235-355 (360)
415 PRK05994 O-acetylhomoserine am 74.8 6.9 0.00015 41.1 6.4 44 252-298 82-129 (427)
416 PRK06939 2-amino-3-ketobutyrat 74.8 12 0.00025 37.8 7.9 80 43-127 295-390 (397)
417 PRK07392 threonine-phosphate d 74.5 24 0.00052 35.5 10.1 99 17-128 246-357 (360)
418 PRK07495 4-aminobutyrate amino 74.3 12 0.00026 39.3 8.0 52 367-419 349-419 (425)
419 TIGR03801 asp_4_decarbox aspar 74.3 9 0.00019 41.6 7.2 80 43-127 404-513 (521)
420 TIGR01364 serC_1 phosphoserine 74.1 24 0.00053 35.9 10.0 106 13-127 223-345 (349)
421 PF04864 Alliinase_C: Allinase 73.8 3.8 8.3E-05 42.1 4.0 52 365-417 298-361 (363)
422 PRK08297 L-lysine aminotransfe 73.5 12 0.00027 39.4 7.9 51 367-419 378-439 (443)
423 PLN02482 glutamate-1-semialdeh 73.3 8 0.00017 41.4 6.5 37 382-420 432-472 (474)
424 TIGR03402 FeS_nifS cysteine de 73.2 17 0.00037 36.7 8.7 82 43-127 253-369 (379)
425 COG0155 CysI Sulfite reductase 73.1 13 0.00027 40.4 7.9 100 52-151 18-141 (510)
426 PRK06434 cystathionine gamma-l 73.1 8 0.00017 40.2 6.3 38 252-292 83-120 (384)
427 TIGR01326 OAH_OAS_sulfhy OAH/O 72.9 6.6 0.00014 41.0 5.7 44 252-298 76-123 (418)
428 PRK05839 hypothetical protein; 72.3 32 0.00069 35.0 10.4 70 18-103 265-336 (374)
429 PRK00615 glutamate-1-semialdeh 72.2 11 0.00024 39.8 7.1 37 381-419 386-426 (433)
430 COG1932 SerC Phosphoserine ami 72.1 34 0.00074 35.5 10.3 110 302-418 237-360 (365)
431 TIGR03812 tyr_de_CO2_Arch tyro 72.1 15 0.00033 36.7 8.0 82 41-126 284-372 (373)
432 TIGR02618 tyr_phenol_ly tyrosi 72.0 11 0.00024 40.1 7.1 68 195-297 63-131 (450)
433 PRK06918 4-aminobutyrate amino 71.9 16 0.00034 38.6 8.3 39 89-127 392-440 (451)
434 PRK13034 serine hydroxymethylt 71.8 38 0.00082 35.4 11.0 80 47-127 288-389 (416)
435 PRK04612 argD acetylornithine 71.6 16 0.00034 38.2 8.1 81 47-127 309-400 (408)
436 PRK07986 adenosylmethionine--8 71.4 21 0.00045 37.6 9.0 79 339-419 334-421 (428)
437 PRK01278 argD acetylornithine 71.2 17 0.00036 37.1 8.1 83 38-127 295-385 (389)
438 PRK02610 histidinol-phosphate 71.1 53 0.0012 33.3 11.7 97 18-127 265-368 (374)
439 TIGR02407 ectoine_ectB diamino 70.8 15 0.00032 38.4 7.7 54 74-127 345-409 (412)
440 PRK08360 4-aminobutyrate amino 70.8 11 0.00025 39.7 6.9 36 382-419 383-424 (443)
441 PRK06777 4-aminobutyrate amino 70.1 16 0.00035 38.2 7.8 83 45-127 318-418 (421)
442 PRK03715 argD acetylornithine 70.1 20 0.00044 37.2 8.5 81 338-419 300-391 (395)
443 PRK06425 histidinol-phosphate 69.9 34 0.00073 34.2 9.8 79 42-127 240-330 (332)
444 TIGR03246 arg_catab_astC succi 69.8 17 0.00037 37.4 7.9 81 45-127 299-392 (397)
445 TIGR00709 dat 2,4-diaminobutyr 69.5 21 0.00046 37.6 8.6 84 336-419 325-433 (442)
446 PLN02760 4-aminobutyrate:pyruv 69.4 21 0.00045 38.6 8.6 37 382-419 449-489 (504)
447 PRK09221 beta alanine--pyruvat 69.2 29 0.00063 36.6 9.6 82 337-419 347-441 (445)
448 PRK13479 2-aminoethylphosphona 69.1 30 0.00066 34.7 9.4 84 43-127 263-360 (368)
449 PTZ00125 ornithine aminotransf 68.8 21 0.00046 36.3 8.3 79 48-127 302-392 (400)
450 cd06502 TA_like Low-specificit 68.6 28 0.0006 34.2 8.8 79 45-127 248-338 (338)
451 cd00611 PSAT_like Phosphoserin 68.6 40 0.00087 34.2 10.1 106 15-127 233-353 (355)
452 PRK00854 rocD ornithine--oxo-a 68.1 21 0.00046 36.4 8.1 79 46-127 309-398 (401)
453 PRK06541 hypothetical protein; 68.1 20 0.00044 38.1 8.1 79 337-419 347-453 (460)
454 PRK06105 aminotransferase; Pro 67.8 22 0.00047 37.8 8.3 80 339-419 349-447 (460)
455 PLN03227 serine palmitoyltrans 66.8 23 0.00051 36.5 8.2 78 46-128 263-380 (392)
456 PLN02431 ferredoxin--nitrite r 66.1 20 0.00042 39.6 7.7 86 84-191 147-240 (587)
457 PRK06082 4-aminobutyrate amino 66.0 22 0.00048 37.7 7.9 35 385-419 410-449 (459)
458 PRK05613 O-acetylhomoserine am 65.8 19 0.00041 38.1 7.3 35 252-289 88-122 (437)
459 TIGR00713 hemL glutamate-1-sem 65.4 28 0.0006 36.1 8.4 80 39-127 318-419 (423)
460 TIGR03251 LAT_fam L-lysine 6-t 65.4 23 0.0005 37.2 7.9 38 380-418 389-431 (431)
461 PRK13580 serine hydroxymethylt 65.3 33 0.00072 37.1 9.0 108 13-129 312-444 (493)
462 PRK06943 adenosylmethionine--8 64.9 27 0.00059 37.0 8.4 79 339-419 352-444 (453)
463 PRK13360 omega amino acid--pyr 64.8 23 0.0005 37.4 7.8 78 338-419 345-438 (442)
464 COG1103 Archaea-specific pyrid 64.8 19 0.00042 36.2 6.6 98 19-127 258-377 (382)
465 PRK07179 hypothetical protein; 63.9 26 0.00057 36.0 7.9 82 41-128 299-396 (407)
466 PRK12389 glutamate-1-semialdeh 63.8 49 0.0011 34.6 10.0 37 382-420 386-426 (428)
467 PRK05964 adenosylmethionine--8 63.5 41 0.00089 35.0 9.3 38 381-419 379-420 (423)
468 cd00613 GDC-P Glycine cleavage 63.2 21 0.00046 36.1 7.0 79 42-124 305-398 (398)
469 TIGR01976 am_tr_V_VC1184 cyste 62.9 23 0.0005 36.0 7.1 78 43-124 292-397 (397)
470 TIGR00508 bioA adenosylmethion 62.5 44 0.00096 35.0 9.3 40 380-420 382-425 (427)
471 TIGR02006 IscS cysteine desulf 62.2 70 0.0015 32.8 10.6 50 41-90 259-311 (402)
472 PRK00451 glycine dehydrogenase 60.8 43 0.00094 34.8 8.9 81 41-127 348-445 (447)
473 PRK07678 aminotransferase; Val 60.5 38 0.00083 35.8 8.5 35 385-419 402-447 (451)
474 PRK06358 threonine-phosphate d 60.3 74 0.0016 32.1 10.3 98 19-128 246-353 (354)
475 PRK06917 hypothetical protein; 60.0 28 0.00061 36.8 7.4 35 385-419 389-435 (447)
476 PLN02452 phosphoserine transam 59.7 60 0.0013 33.5 9.5 107 12-126 237-359 (365)
477 PRK07036 hypothetical protein; 59.6 27 0.00058 37.2 7.2 36 384-419 411-450 (466)
478 PRK09566 nirA ferredoxin-nitri 59.1 23 0.00051 38.2 6.7 58 75-132 61-131 (513)
479 PLN02409 serine--glyoxylate am 58.6 1.1E+02 0.0024 31.5 11.4 82 42-127 270-369 (401)
480 PRK06062 hypothetical protein; 58.4 38 0.00083 35.9 8.0 37 382-419 403-443 (451)
481 PRK07505 hypothetical protein; 58.3 25 0.00055 36.1 6.5 40 379-419 346-397 (402)
482 TIGR01885 Orn_aminotrans ornit 58.2 41 0.00089 34.5 8.1 78 47-127 309-399 (401)
483 TIGR02539 SepCysS Sep-tRNA:Cys 57.9 55 0.0012 33.2 8.9 82 40-127 264-365 (370)
484 PRK07481 hypothetical protein; 57.9 56 0.0012 34.6 9.2 35 385-419 405-443 (449)
485 PRK14808 histidinol-phosphate 57.6 1.3E+02 0.0027 30.2 11.3 95 18-126 233-333 (335)
486 KOG2467|consensus 57.5 2.6E+02 0.0056 29.6 16.6 86 331-420 316-425 (477)
487 PRK08593 4-aminobutyrate amino 56.9 39 0.00084 35.7 7.8 38 381-419 385-427 (445)
488 TIGR01825 gly_Cac_T_rel pyrido 56.9 44 0.00096 33.6 8.0 78 45-127 285-378 (385)
489 PRK07812 O-acetylhomoserine am 56.2 41 0.00089 35.6 7.8 35 252-289 88-122 (436)
490 TIGR03576 pyridox_MJ0158 pyrid 55.9 99 0.0021 31.4 10.3 103 5-126 222-343 (346)
491 PLN03226 serine hydroxymethylt 55.8 45 0.00099 35.7 8.1 89 43-131 312-420 (475)
492 PRK05769 4-aminobutyrate amino 54.9 39 0.00084 35.6 7.4 33 95-127 399-436 (441)
493 KOG2040|consensus 54.3 3.3E+02 0.0072 30.9 14.1 219 41-298 391-653 (1001)
494 PRK08117 4-aminobutyrate amino 53.0 61 0.0013 33.8 8.4 33 95-127 387-426 (433)
495 PRK09567 nirA ferredoxin-nitri 52.7 47 0.001 36.6 7.8 65 68-132 96-181 (593)
496 TIGR01365 serC_2 phosphoserine 52.7 1.2E+02 0.0026 31.5 10.3 108 13-127 235-370 (374)
497 PRK07046 aminotransferase; Val 52.0 50 0.0011 35.0 7.7 33 386-419 413-448 (453)
498 PRK06173 adenosylmethionine--8 51.8 59 0.0013 34.2 8.1 77 339-419 336-423 (429)
499 PRK11522 putrescine--2-oxoglut 51.5 59 0.0013 34.6 8.1 80 339-419 357-449 (459)
500 KOG1549|consensus 51.1 75 0.0016 33.7 8.6 101 158-294 40-150 (428)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-68 Score=528.41 Aligned_cols=260 Identities=43% Similarity=0.780 Sum_probs=254.3
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
++..+.|||++|.++|++|++++|||||||+|+|++|++|++++|++|++.+.+++.++.|+|+.|+++|++++++++||
T Consensus 5 i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG 84 (396)
T COG1448 5 IEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFG 84 (396)
T ss_pred cccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcC
Confidence 67788999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.+++.+.++||++ +||+||||||++++.|++.+.| ..+||||||+||||..||+.+|++
T Consensus 85 ~d~~~l~~~Rv~t--------------------~Qt~GGTGAL~~~A~fl~~~~~-~~~vwis~PtW~NH~~If~~aGl~ 143 (396)
T COG1448 85 ADSPALAEDRVAT--------------------VQTLGGTGALRVAADFLARFFP-DATVWISDPTWPNHKAIFEAAGLE 143 (396)
T ss_pred CCcHHHHhhhHhh--------------------eecCCcchHHHHHHHHHHHhCC-CceEEeCCCCcHhHHHHHHhcCCc
Confidence 9999999999999 9999999999999999999999 788999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 144 v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Glee 223 (396)
T COG1448 144 VETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEE 223 (396)
T ss_pred eeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHH
Confidence
Q ss_pred ----------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhh
Q psy16707 299 ----------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKL 326 (420)
Q Consensus 299 ----------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L 326 (420)
+.++|++|||||.||+++|++||+||+|
T Consensus 224 Da~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~L 303 (396)
T COG1448 224 DAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPEL 303 (396)
T ss_pred HHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHH
Confidence 7889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK 406 (420)
Q Consensus 327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~ 406 (420)
+++|++|++.|++||.+||..|++.|++.|.+.+|+|+..|.|||+|+|++++||++|++||+||++.+||||+||+|++
T Consensus 304 ra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ 383 (396)
T COG1448 304 RAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTS 383 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
||+|+|+||.+|+
T Consensus 384 ni~~va~ai~~v~ 396 (396)
T COG1448 384 NIDYVAKAIAAVL 396 (396)
T ss_pred hHHHHHHHHHhhC
Confidence 9999999999874
No 2
>KOG1411|consensus
Probab=100.00 E-value=1.5e-68 Score=523.51 Aligned_cols=271 Identities=61% Similarity=0.959 Sum_probs=259.0
Q ss_pred CCcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHH
Q psy16707 129 SLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDF 208 (420)
Q Consensus 129 ~~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~f 208 (420)
+-++...-..++-.++|||++++++|++|++++|||||+|+|||++|+|.++++|++|++++...+.++||+||.|+++|
T Consensus 21 ~~~~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF 100 (427)
T KOG1411|consen 21 SARASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEF 100 (427)
T ss_pred cccccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHH
Confidence 33333333346777899999999999999999999999999999999999999999999998877889999999999999
Q ss_pred HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
.+..++++||++++.++++||++ +||++|||||++++.||+.+.| +.+||||+|+|.||
T Consensus 101 ~k~sakLa~G~~s~~ik~~Ri~t--------------------vQ~lSGTGaLriga~Fl~~f~~-~~~I~ip~PTWgNh 159 (427)
T KOG1411|consen 101 NKLSAKLALGDNSPVIKEKRIVT--------------------VQTLSGTGALRVGAEFLARFYP-SRDIYIPDPTWGNH 159 (427)
T ss_pred HHHHHHHhhcCCchhhhccceeE--------------------EEeccCcchhhHHHHHHHhhcc-ccceeecCCccccc
Confidence 99999999999999999999999 9999999999999999999999 89999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
..+|+.+|+.
T Consensus 160 ~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA 239 (427)
T KOG1411|consen 160 KNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA 239 (427)
T ss_pred CccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh
Confidence 9999999986
Q ss_pred ---------------------------------------------------------------hhhhhhccCCCchHHHH
Q psy16707 299 ---------------------------------------------------------------KILIRAFYSSPPIHGAR 315 (420)
Q Consensus 299 ---------------------------------------------------------------~~~~r~~~s~pp~~ga~ 315 (420)
+.++|.+|||||.||++
T Consensus 240 YQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGAr 319 (427)
T KOG1411|consen 240 YQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGAR 319 (427)
T ss_pred hcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchh
Confidence 67889999999999999
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC
Q psy16707 316 IVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD 395 (420)
Q Consensus 316 iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~ 395 (420)
||++||+||+|+++|..|++.|.+||..||+.|++.|++.|++++|+||++|.|||||+|++++||+.|.+|||||++.+
T Consensus 320 Iv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~d 399 (427)
T KOG1411|consen 320 IVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKD 399 (427)
T ss_pred hhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 396 GRISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 396 gRis~agl~~~ni~~la~AI~~vv~ 420 (420)
||||++|++++|++|+|+||++|++
T Consensus 400 GRiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 400 GRISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred ceEeeccccccCCcccchhhHhHhc
Confidence 9999999999999999999999874
No 3
>KOG1412|consensus
Probab=100.00 E-value=2.8e-66 Score=502.12 Aligned_cols=261 Identities=44% Similarity=0.811 Sum_probs=254.4
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPIIGAPDFGKLAAQLAY 217 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~fr~a~~~~~~ 217 (420)
++..+++.+|.+++.|.+|..+.||||+||+||+++|+||++|+|++++..+.++ ..+|+|+|+.|++.|+++++++++
T Consensus 9 I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~l 88 (410)
T KOG1412|consen 9 IPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLL 88 (410)
T ss_pred CccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhc
Confidence 6778899999999999999999999999999999999999999999999999877 679999999999999999999999
Q ss_pred CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
|.++++++++|+.+ ||++|||||+++++.||..+.+ ..+||+++|+|+||..+|+.+|+
T Consensus 89 g~~s~a~kE~Rv~~--------------------vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf 147 (410)
T KOG1412|consen 89 GADSPAIKEDRVFG--------------------VQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGF 147 (410)
T ss_pred CCCchhhhhccccc--------------------eeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCC
Confidence 99999999999999 9999999999999999999998 79999999999999999999997
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
.
T Consensus 148 ~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD 227 (410)
T KOG1412|consen 148 TTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGD 227 (410)
T ss_pred ceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCC
Confidence 5
Q ss_pred -------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCC
Q psy16707 299 -------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGD 323 (420)
Q Consensus 299 -------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~d 323 (420)
..++|++|||||++||+||+.+|++
T Consensus 228 ~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~t 307 (410)
T KOG1412|consen 228 LDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLST 307 (410)
T ss_pred ccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcC
Confidence 6778999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEccc
Q psy16707 324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGV 403 (420)
Q Consensus 324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl 403 (420)
|+|+++|.+.++.|+.||++||.+|++.|.++|+||+|+||++|.|||+|+||++.||++|.++|+||+.++||||+|||
T Consensus 308 P~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRInisGL 387 (410)
T KOG1412|consen 308 PELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRINISGL 387 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcEeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhC
Q psy16707 404 TSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 404 ~~~ni~~la~AI~~vv~ 420 (420)
|.+|++|+|+||+++||
T Consensus 388 N~~NveyVAkAIde~Vr 404 (410)
T KOG1412|consen 388 NMKNVEYVAKAIDETVR 404 (410)
T ss_pred ccccHHHHHHHHHHHHH
Confidence 99999999999999986
No 4
>KOG1412|consensus
Probab=100.00 E-value=4.5e-44 Score=347.53 Aligned_cols=125 Identities=46% Similarity=0.840 Sum_probs=123.4
Q ss_pred chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
++.||..++|.+|||||+||||||++||++|+|+++|.+++++|+.||++||++|.+.|..++|||+||||++|.|||||
T Consensus 278 v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSy 357 (410)
T KOG1412|consen 278 VKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSY 357 (410)
T ss_pred HHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceee
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
|||||.||+.|.++||||++.+|||||+|||.+||||||+||+++
T Consensus 358 TGLtp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAIde~ 402 (410)
T KOG1412|consen 358 TGLTPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAIDET 402 (410)
T ss_pred cCCCHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999986
No 5
>KOG1411|consensus
Probab=100.00 E-value=1.5e-44 Score=354.79 Aligned_cols=126 Identities=68% Similarity=1.047 Sum_probs=123.9
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
..||+.++|+||||||.||||||++||+||+|+++|..|++.|.+||+.||++|++.|++.+++++|+||++|.||||||
T Consensus 299 ~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fT 378 (427)
T KOG1411|consen 299 ESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFT 378 (427)
T ss_pred HHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeec
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhhCC
Q psy16707 84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGS 129 (420)
Q Consensus 84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v~~ 129 (420)
||+||||+.|++||||||+.|||||+||+|++||+|+|+||++|-+
T Consensus 379 gl~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 379 GLNPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred CCCHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhHhc
Confidence 9999999999999999999999999999999999999999999954
No 6
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-44 Score=354.70 Aligned_cols=125 Identities=44% Similarity=0.773 Sum_probs=123.3
Q ss_pred chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
++.||+.++|++|||||.|||+||++||+||+||++|++||++||+||++||+.|++.|++++++++|+||.+|+|||||
T Consensus 271 v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy 350 (396)
T COG1448 271 VLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSY 350 (396)
T ss_pred HHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeec
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
+|||++||++||++|+||++.+|||||||||++||+|||+||.+|
T Consensus 351 ~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 351 TGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred CCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999987
No 7
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.9e-34 Score=298.24 Aligned_cols=260 Identities=54% Similarity=0.915 Sum_probs=228.7
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+...+.|+|+.+.+.+++|..+.+|||++|.|.|+++.|++.+.++++...+......++|+|..|+++||+++++++++
T Consensus 27 ~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~ 106 (423)
T PLN02397 27 VEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYG 106 (423)
T ss_pred CCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcC
Confidence 56777899999999999999999999999999999998889999999988775434556899999999999999999988
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.+.+.+.+++|.. +++++|+|+..+...++..+.| ||+|++++|+|++|..+++.+|++
T Consensus 107 ~~~~~~~~~~i~~--------------------~~i~~g~Ga~~l~~~~~~~~~p-Gd~Vlv~~P~y~~y~~~~~~~g~~ 165 (423)
T PLN02397 107 ADSPAIKENRVAT--------------------VQCLSGTGSLRLGAEFLARFYP-GSTIYIPNPTWGNHHNIFRDAGVP 165 (423)
T ss_pred CCCchhhcCeeEe--------------------eecccchHHHHHHHHHHHHhCC-CCEEEEeCCCchhHHHHHHHcCCe
Confidence 7655555555655 7789999998877777776778 999999999999999999988764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 166 ~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~ 245 (423)
T PLN02397 166 VRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLD 245 (423)
T ss_pred EEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchh
Confidence
Q ss_pred -----------------------------------h------------------hhhhhccCCCchHHHHHHHHHhCChh
Q psy16707 299 -----------------------------------K------------------ILIRAFYSSPPIHGARIVQEILGDPK 325 (420)
Q Consensus 299 -----------------------------------~------------------~~~r~~~s~pp~~ga~iv~~IL~dp~ 325 (420)
. .+.+..++++|.++|.+++.+|++++
T Consensus 246 ~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~ 325 (423)
T PLN02397 246 ADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPE 325 (423)
T ss_pred hhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHH
Confidence 0 11124467889999999999999988
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCC
Q psy16707 326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTS 405 (420)
Q Consensus 326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~ 405 (420)
+.++|.++++.|+++|+++|+.+++.|+++|.++.|.++.+++|||.|+.++.+|+++|++++||+++++||||+|+++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~~~~~~Ll~~~~V~v~~~~Ri~~~~~~~ 405 (423)
T PLN02397 326 LFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRISMAGLSS 405 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEeeCCH
Confidence 88899999999999999999999999999987778998899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHh
Q psy16707 406 KNVGYLAKAIHAVT 419 (420)
Q Consensus 406 ~ni~~la~AI~~vv 419 (420)
+++++++++|++||
T Consensus 406 ~~i~~~~~~i~~~~ 419 (423)
T PLN02397 406 KNVPYLADAIHAVV 419 (423)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999987
No 8
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=6.7e-32 Score=275.79 Aligned_cols=260 Identities=42% Similarity=0.730 Sum_probs=225.9
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+..+++|+++.+...++.+..+++|||++|.+.++++.+++.+.+++|...+..+....+|.|..|.++||+++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 84 (396)
T PRK09257 5 LEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFG 84 (396)
T ss_pred CCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcC
Confidence 56788899999999998887889999999998788887776789999988876544456899999999999999999988
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.....+++++|.+ +.|.|+++|+.+++.++..+.| ||+|++++|+|+.|..+++.+|++
T Consensus 85 ~~~~~~~~~~i~v--------------------~iT~Ga~~al~~~~~~l~~~~p-Gd~Vlv~~P~y~~~~~~~~~~g~~ 143 (396)
T PRK09257 85 ADSPALAAGRVAT--------------------VQTPGGTGALRVGADFLKRAFP-DAKVWVSDPTWPNHRAIFEAAGLE 143 (396)
T ss_pred CCCcccccCeEEE--------------------EecCCccHHHHHHHHHHHHhCC-CCeEEECCCCcccHHHHHHHcCCc
Confidence 7655556666633 7899999999999877765678 999999999999999999998875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 144 ~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~ 223 (396)
T PRK09257 144 VKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEE 223 (396)
T ss_pred EEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHH
Confidence
Q ss_pred -----------------------------------h-----------------hhhhhccCCCchHHHHHHHHHhCChhh
Q psy16707 299 -----------------------------------K-----------------ILIRAFYSSPPIHGARIVQEILGDPKL 326 (420)
Q Consensus 299 -----------------------------------~-----------------~~~r~~~s~pp~~ga~iv~~IL~dp~L 326 (420)
. ...+..++++|.+.|.+++.+|+++++
T Consensus 224 ~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 303 (396)
T PRK09257 224 DAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPEL 303 (396)
T ss_pred HHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHH
Confidence 0 112356788889999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK 406 (420)
Q Consensus 327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~ 406 (420)
.+.|.++++.++++|+++|+.+.+.|++.+.++.|.+..+++|||.|+.++++++++|++++||++.|.|||++|+++++
T Consensus 304 ~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~ 383 (396)
T PRK09257 304 RAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNES 383 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCCeEEEeeCCHH
Confidence 88899999999999999999999999998755458888899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
+|++++++|++|+
T Consensus 384 ~i~~~~~~i~~~~ 396 (396)
T PRK09257 384 NIDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999874
No 9
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-31 Score=273.99 Aligned_cols=260 Identities=51% Similarity=0.833 Sum_probs=223.3
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+..+.+++++.+.+.++++..+++|||++|.+.|+++...+.+.+++|...+.......+|.|..|+++||+++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 87 (404)
T PTZ00376 8 VPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFG 87 (404)
T ss_pred CCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcC
Confidence 45677889999999888777789999999987677776677888998887765333458999999999999999999988
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHH-hcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK-NFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~-~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
.++..+++++|.. .+|.||+||+.++..++. .+.| ||+|++++|+|++|..+++.+|+
T Consensus 88 ~~~~~~~~~~v~~--------------------~~t~G~~~al~~~~~~l~~~~~~-Gd~Vlv~~P~y~~~~~~~~~~G~ 146 (404)
T PTZ00376 88 EASYALAEKRIAT--------------------VQALSGTGALRLGFEFLKRFLPA-GTTVYVSNPTWPNHVNIFKSAGL 146 (404)
T ss_pred CCccccccCeEEE--------------------eeccCcchHHHHHHHHHHHhcCC-CCEEEEcCCCchhHHHHHHHcCC
Confidence 7655566777754 579999999998876442 3457 99999999999999999999887
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 147 ~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~ 226 (404)
T PTZ00376 147 NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDL 226 (404)
T ss_pred ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCH
Confidence 5
Q ss_pred ------------------------------------h-----------hh-------hhhccCCCchHHHHHHHHHhCCh
Q psy16707 299 ------------------------------------K-----------IL-------IRAFYSSPPIHGARIVQEILGDP 324 (420)
Q Consensus 299 ------------------------------------~-----------~~-------~r~~~s~pp~~ga~iv~~IL~dp 324 (420)
. .+ .++.|+++|..+|.++..+|+++
T Consensus 227 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 306 (404)
T PTZ00376 227 DKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDP 306 (404)
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCH
Confidence 0 11 24567888889999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccC
Q psy16707 325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVT 404 (420)
Q Consensus 325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~ 404 (420)
++..+|.++++.++++++++|+.+.+.|++.+.++.|.++.+++|||.|+.++.+++++|++++||++.|+||||+|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~Ris~~~~~ 386 (404)
T PTZ00376 307 ELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLT 386 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCCeEEEeccC
Confidence 88788999999999999999999999999988776688888999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHh
Q psy16707 405 SKNVGYLAKAIHAVT 419 (420)
Q Consensus 405 ~~ni~~la~AI~~vv 419 (420)
.+++++++++|++++
T Consensus 387 ~~~~~~~~~~l~~~~ 401 (404)
T PTZ00376 387 SKNVDYVAEAIHDVV 401 (404)
T ss_pred HHhHHHHHHHHHHHH
Confidence 999999999999986
No 10
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1e-23 Score=216.89 Aligned_cols=228 Identities=17% Similarity=0.213 Sum_probs=177.2
Q ss_pred HHHccCC-CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707 153 AFKKDTN-VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISI 231 (420)
Q Consensus 153 ~~~~d~~-~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~ 231 (420)
.+.+... .++|||++|. | +.++++.+++|......+... .|+|..|+++||+++++++...++..+.++.
T Consensus 20 ~~~~~~~~~~vi~l~iG~---P--d~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~--- 90 (393)
T COG0436 20 AAAELKGKEDVIDLSIGE---P--DFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEE--- 90 (393)
T ss_pred HHHHhcCCCCEEEeCCCC---C--CCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---
Confidence 4433333 5899999997 4 558888888888876654223 8889999999999999999666543334433
Q ss_pred ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------
Q psy16707 232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------- 298 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------- 298 (420)
||+.|.|+++|+.+++..+ ++| ||+|++|+|+|++|..+++.+|++
T Consensus 91 ------------------eiivt~Ga~~al~~~~~a~--~~p-GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f 149 (393)
T COG0436 91 ------------------EIIVTAGAKEALFLAFLAL--LNP-GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGF 149 (393)
T ss_pred ------------------eEEEeCCHHHHHHHHHHHh--cCC-CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCC
Confidence 2478999999999998755 568 999999999999999999999875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 150 ~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i 229 (393)
T COG0436 150 KPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTI 229 (393)
T ss_pred cCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEE
Confidence
Q ss_pred ------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSL 348 (420)
Q Consensus 299 ------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l 348 (420)
..+.....+|+|..+|.++...|++++ + .++++.|+++|++||+.+
T Consensus 230 ~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~---~-~~~~~~~~~~~~~rrd~l 305 (393)
T COG0436 230 TINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQ---S-DEVVEEMREEYRERRDLL 305 (393)
T ss_pred EEecccccccccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCcc---c-hHHHHHHHHHHHHHHHHH
Confidence 335566778999999999998898763 2 356777889999999999
Q ss_pred HHHHHhcCCCCCCcccC-CCCceEEecCCC-----HHHHHHHHHhCCeEEeCC-------C----cEEEcccCCCCHHHH
Q psy16707 349 KDNLQKEGSNKPWNHIT-DQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD-------G----RISMAGVTSKNVGYL 411 (420)
Q Consensus 349 ~~~L~~~g~~~~w~~i~-~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~-------g----Ris~agl~~~ni~~l 411 (420)
++.|.+.+. |.... ++++||.|..++ .+++++|++++||.++|| | |||++.-. +.++..
T Consensus 306 ~~~l~~~~g---~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~-~~l~~a 381 (393)
T COG0436 306 VEALNEIGG---LSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSE-ETLEEA 381 (393)
T ss_pred HHHHHhcCC---eeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCH-HHHHHH
Confidence 999998764 78777 556777786443 578999999999999995 2 99999433 666666
Q ss_pred HHHHHHH
Q psy16707 412 AKAIHAV 418 (420)
Q Consensus 412 a~AI~~v 418 (420)
.+.|.+.
T Consensus 382 ~~rl~~~ 388 (393)
T COG0436 382 LRRLARF 388 (393)
T ss_pred HHHHHHH
Confidence 6655554
No 11
>PRK08637 hypothetical protein; Provisional
Probab=99.85 E-value=1.9e-19 Score=183.76 Aligned_cols=233 Identities=19% Similarity=0.202 Sum_probs=181.2
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
..+|+|++||.|.|+. .+++.+.++++...... ...+.|.|..|.++||+++++++..... .+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~--------- 69 (388)
T PRK08637 2 KATKYNATIGMATEKG-GPMYLSSLQDLLNDLTP-DEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKM--------- 69 (388)
T ss_pred CccceecceeeEecCC-CcchHHHHHHHHHhhcc-ccccCCCCCCCCHHHHHHHHHHHhccCc-ccccccc---------
Confidence 4689999999996665 58999999999887543 4678999999999999999999876431 1221111
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh-hcCcc-------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK-HTGLE------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~-~aG~~------------------- 298 (420)
.+|+.|.|+++++++++.++. .| ||.|++++|+|++|...+. ..|++
T Consensus 70 ----------~~I~it~G~~~al~~~~~~l~--~~-gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~ 136 (388)
T PRK08637 70 ----------SLPIVTNALTHGLSLVADLFV--DQ-GDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALK 136 (388)
T ss_pred ----------ceeeEccchHHHHHHHHHHhc--CC-CCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHH
Confidence 134789999999999988664 47 9999999999999998764 56654
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 137 ~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 216 (388)
T PRK08637 137 EALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSN 216 (388)
T ss_pred HHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhccccc
Confidence
Q ss_pred -------------------------h-----------hhh-------hhccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707 299 -------------------------K-----------ILI-------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVK 335 (420)
Q Consensus 299 -------------------------~-----------~~~-------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~ 335 (420)
. .+. +..++++|...|.++..+|+++ .|.++++
T Consensus 217 vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~----~~~~~~~ 292 (388)
T PRK08637 217 ILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSP----EFDKEKQ 292 (388)
T ss_pred ceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCH----HHHHHHH
Confidence 1 011 1234567888888888888764 6777888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC----CcEEEcccCCCC
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD----GRISMAGVTSKN 407 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~----gRis~agl~~~n 407 (420)
.++.+++++++.+.+.|+..+.+..|.+.++++|+|.|+.++ .+++++|++++||.+.+. .|||++..+.++
T Consensus 293 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~ 372 (388)
T PRK08637 293 EKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEED 372 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHH
Confidence 888899999999999998775555688888899999998765 356688888999998753 399999999999
Q ss_pred HHHHHHHHHHHhC
Q psy16707 408 VGYLAKAIHAVTK 420 (420)
Q Consensus 408 i~~la~AI~~vv~ 420 (420)
+++..+.|.++++
T Consensus 373 i~~~~~~l~~~~~ 385 (388)
T PRK08637 373 IPELFDSIYKAIK 385 (388)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888887753
No 12
>PLN00175 aminotransferase family protein; Provisional
Probab=99.84 E-value=5.6e-19 Score=182.39 Aligned_cols=245 Identities=15% Similarity=0.123 Sum_probs=182.6
Q ss_pred CcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707 130 LPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209 (420)
Q Consensus 130 ~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr 209 (420)
.++.++++ +..+..+++..+.+.... .+.|||++|. |+ +++++.++++......+ ....|.|..|.++||
T Consensus 28 ~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~i~l~~G~---P~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~Lr 97 (413)
T PLN00175 28 QPLQVAKR-LEKFKTTIFTQMSSLAIK---HGAINLGQGF---PN--FDGPDFVKEAAIQAIRD-GKNQYARGFGVPELN 97 (413)
T ss_pred cccchhHH-hhcCCCCHHHHHHHHhhc---CCeEecCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCcCCCCCCHHHH
Confidence 34456666 778888888777766532 4799999997 54 45678888888777654 457899999999999
Q ss_pred HHHHHHHcCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 210 KLAAQLAYGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 210 ~a~~~~~~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+++++++....+..++++ .| +.|.|+++|+.+++..+ +.| ||+|++++|+|+.|
T Consensus 98 ~aia~~~~~~~g~~~~~~~~I----------------------~vt~G~~~al~~~~~~l--~~~-gd~Vlv~~P~y~~~ 152 (413)
T PLN00175 98 SAIAERFKKDTGLVVDPEKEV----------------------TVTSGCTEAIAATILGL--INP-GDEVILFAPFYDSY 152 (413)
T ss_pred HHHHHHHHHHhCCCCCCCCCE----------------------EEeCCHHHHHHHHHHHh--CCC-CCEEEEeCCCchhH
Confidence 999999854333223443 34 56999999999887644 568 99999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
...++..|++
T Consensus 153 ~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l 232 (413)
T PLN00175 153 EATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKL 232 (413)
T ss_pred HHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCcc
Confidence 9999988875
Q ss_pred -------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHH
Q psy16707 299 -------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQ 329 (420)
Q Consensus 299 -------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~ 329 (420)
.........+++...|.++...|.++ ..
T Consensus 233 ~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~---~~ 309 (413)
T PLN00175 233 AFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAP---ES 309 (413)
T ss_pred ccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC---HH
Confidence 11112233456777888888878653 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------C-HHHHHHHHHhCCeEEeCC-------
Q psy16707 330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N-ATQVEKLIKEHSVYLTKD------- 395 (420)
Q Consensus 330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~-~~~v~~Ll~e~~Vy~~p~------- 395 (420)
.++.++..|+++|+.+.+.|++.| +....+++|||.|+.+ + .++++.|++++||.+.|+
T Consensus 310 ---~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~ 382 (413)
T PLN00175 310 ---YYEELKRDYSAKKDILVEGLKEVG----FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNP 382 (413)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCC
Confidence 455666899999999999999886 4556778899999643 2 367789999999999984
Q ss_pred --C----cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 396 --G----RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 396 --g----Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
+ ||+++. ++++++...+.|.++++
T Consensus 383 ~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 383 EDGKNLVRFAFCK-DEETLRAAVERMKTKLK 412 (413)
T ss_pred CCCCCEEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 1 999984 77777777777776553
No 13
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.83 E-value=6.2e-19 Score=180.45 Aligned_cols=241 Identities=18% Similarity=0.150 Sum_probs=178.5
Q ss_pred CCChHHHHHHHHHccCCC--CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC
Q psy16707 143 KVPSSNLLTEAFKKDTNV--NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED 220 (420)
Q Consensus 143 ~~d~i~~l~~~~~~d~~~--~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~ 220 (420)
..|++..+...++++..+ +.|||++|.. ++.++.++++.+.++......+.....|.|..|.++||+++++++....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~ 90 (401)
T TIGR01264 12 TVNPIRAIVDNMKVKPNPEKPMIKLSIGDP-TVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPD 90 (401)
T ss_pred hhhHHHHHHHHHHhhhhcCCCeeecCCCCC-CCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcC
Confidence 467888888888887754 5599999984 2234567788888888776554334679999999999999999986533
Q ss_pred CccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--
Q psy16707 221 CPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-- 298 (420)
Q Consensus 221 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-- 298 (420)
. .+++++| +.|.|+++++.+++.++ +.| ||+|++++|+|++|..+++..|++
T Consensus 91 ~-~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~v~i~~P~y~~~~~~~~~~g~~v~ 144 (401)
T TIGR01264 91 G-PIEADDV----------------------VLCSGCSHAIEMCIAAL--ANA-GQNILVPRPGFPLYETLAESMGIEVK 144 (401)
T ss_pred C-CCCHHHE----------------------EECcChHHHHHHHHHHh--CCC-CCEEEEeCCCChhHHHHHHHcCCEEE
Confidence 2 2455555 56999999999998766 447 999999999999999999888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 145 ~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 224 (401)
T TIGR01264 145 LYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLA 224 (401)
T ss_pred EeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHH
Confidence
Q ss_pred ------------------------------h-------hhhhh------ccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707 299 ------------------------------K-------ILIRA------FYSSPPIHGARIVQEILGDPKLKAQWLTEVK 335 (420)
Q Consensus 299 ------------------------------~-------~~~r~------~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~ 335 (420)
. .++.. ...+++...|.++..+|.+. ..+.++
T Consensus 225 ~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-----~~~~l~ 299 (401)
T TIGR01264 225 SLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT-----PQEYFD 299 (401)
T ss_pred HcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC-----cHHHHH
Confidence 1 12111 13345667777777777531 135566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC--------c
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG--------R 397 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g--------R 397 (420)
.++++++++|+.+.+.|+++ ++ |.+..+++|+|.|+.++ .+++++|++++||++.|+. |
T Consensus 300 ~~~~~~~~~r~~l~~~L~~~--~~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iR 376 (401)
T TIGR01264 300 GTLSVLESNAMLCYGALAAV--PG-LRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFR 376 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhC--CC-CcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEE
Confidence 77799999999999999986 22 77778899999998642 4567888889999999862 9
Q ss_pred EEEcccCCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl~~~ni~~la~AI~~vv 419 (420)
|+++. +.++++.-.+.|.+.+
T Consensus 377 is~~~-~~~~l~~~l~rl~~~~ 397 (401)
T TIGR01264 377 VVLTV-PVVMMEEACSRIQEFC 397 (401)
T ss_pred EEEcC-CHHHHHHHHHHHHHHH
Confidence 99984 5666666555555543
No 14
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.81 E-value=7.4e-18 Score=171.62 Aligned_cols=237 Identities=14% Similarity=0.099 Sum_probs=160.2
Q ss_pred ccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
+..+..+....+.+..+. ..+.++|||++|. + ..++++.++++......+.....|.+..|.++||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 81 (388)
T PRK07366 7 LQPLQSNVFADMDRAKAQARAAGKELIDLSLGS---S--DLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWY 81 (388)
T ss_pred hhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCC---C--CCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHH
Confidence 444555544444443332 2346789999996 3 34556777777776654444678999999999999999999
Q ss_pred cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707 217 YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT 295 (420)
Q Consensus 217 ~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a 295 (420)
....+..++++ .| +.|.|+++++.+++..+ +.| ||+|++++|+|+.|...++..
T Consensus 82 ~~~~g~~~~~~~~I----------------------~it~Gs~~al~~~~~~l--~~~-gd~Vlv~~P~y~~~~~~~~~~ 136 (388)
T PRK07366 82 EQRFGLAVDPETEV----------------------LPLIGSQEGTAHLPLAV--LNP-GDFALLLDPGYPSHAGGVYLA 136 (388)
T ss_pred HHhhCCcCCCcCeE----------------------EECCCcHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHhc
Confidence 65443334454 34 56999999999988755 457 999999999999999999998
Q ss_pred Ccc-----------------------------------------------------------------------------
Q psy16707 296 GLE----------------------------------------------------------------------------- 298 (420)
Q Consensus 296 G~~----------------------------------------------------------------------------- 298 (420)
|++
T Consensus 137 g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (388)
T PRK07366 137 GGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV 216 (388)
T ss_pred CCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC
Confidence 875
Q ss_pred --------------------------------------h------hhhhhccC-CCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707 299 --------------------------------------K------ILIRAFYS-SPPIHGARIVQEILGDPKLKAQWLTE 333 (420)
Q Consensus 299 --------------------------------------~------~~~r~~~s-~pp~~ga~iv~~IL~dp~L~~~w~~e 333 (420)
. ...+..++ +++...+..+...|. ++.+.
T Consensus 217 ~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~------~~~~~ 290 (388)
T PRK07366 217 EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALT------GPQAT 290 (388)
T ss_pred CCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHh------CcHHH
Confidence 0 00011111 111111111222221 12356
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------HHHHHHHHHhCCeEEeCC--------C--
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------ATQVEKLIKEHSVYLTKD--------G-- 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------~~~v~~Ll~e~~Vy~~p~--------g-- 396 (420)
++.+++.++++|+.+.+.|++.| |.+..+++|+|.|+.++ .++++.|++++||.+.|+ +
T Consensus 291 l~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~i 366 (388)
T PRK07366 291 VQQTVQIFRQRRDAFINALHQIG----WPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYV 366 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeE
Confidence 77888999999999999999886 66677889999997553 355688889999999985 1
Q ss_pred cEEEcccCCCCHHHHHHHHH
Q psy16707 397 RISMAGVTSKNVGYLAKAIH 416 (420)
Q Consensus 397 Ris~agl~~~ni~~la~AI~ 416 (420)
||++++ +.++++...+.|.
T Consensus 367 Ri~~~~-~~~~l~~~l~rl~ 385 (388)
T PRK07366 367 RFALVH-DPDILEEAVERIA 385 (388)
T ss_pred EEEecC-CHHHHHHHHHHHH
Confidence 999984 4444444444443
No 15
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.80 E-value=3.5e-18 Score=179.71 Aligned_cols=231 Identities=14% Similarity=0.127 Sum_probs=163.0
Q ss_pred CCCCceeecccccccCC----------------CCCCc-----------hHHHHHHHHHHHcc--CCCCCCCCCCCCHHH
Q psy16707 158 TNVNKINLGVGAYRDDQ----------------GKPYV-----------LPSVKQADEIVLNK--NLDKEYAPIIGAPDF 208 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~d----------------g~~~~-----------~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~f 208 (420)
+..++|+|++|. || ..+|- +..+.++...+... .....|.+..|+++|
T Consensus 44 ~~~~vi~~~~G~---p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~L 120 (481)
T PTZ00377 44 PFDSIVYCNIGN---PQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFV 120 (481)
T ss_pred CcceeEEcCCCC---hhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHH
Confidence 457999999996 75 32221 33444444444433 134679999999999
Q ss_pred HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
|+++++++...++..+++++| +.|.|+++++.+++..+. ..| ||.|++|+|+|+.|
T Consensus 121 R~aia~~~~~~~g~~~~~~~I----------------------~it~Ga~~al~~~~~~l~-~~~-gD~Vlv~~P~y~~y 176 (481)
T PTZ00377 121 RKAVAAFIERRDGVPKDPSDI----------------------FLTDGASSGIKLLLQLLI-GDP-SDGVMIPIPQYPLY 176 (481)
T ss_pred HHHHHHHHHHhcCCCCChhhE----------------------EEcCCHHHHHHHHHHHhc-cCC-CCEEEECCCCchhH
Confidence 999999986544434556666 679999999999987652 147 99999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
..+++.+|++
T Consensus 177 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~ 256 (481)
T PTZ00377 177 SAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMA 256 (481)
T ss_pred HHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEE
Confidence 9998887764
Q ss_pred ------------------h----h----------hh------------------------------------hhccCCCc
Q psy16707 299 ------------------K----I----------LI------------------------------------RAFYSSPP 310 (420)
Q Consensus 299 ------------------~----~----------~~------------------------------------r~~~s~pp 310 (420)
. . ++ +....+++
T Consensus 257 De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~ 336 (481)
T PTZ00377 257 DEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSN 336 (481)
T ss_pred ehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCC
Confidence 0 0 00 11122345
Q ss_pred hHHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC--CC-------
Q psy16707 311 IHGARIVQEILGDPK----LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG--LN------- 377 (420)
Q Consensus 311 ~~ga~iv~~IL~dp~----L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~--l~------- 377 (420)
..+|.++..+|++++ ....|.++++.++.+|+++|+.+.+.|+++. + |.+..+++|||.|.. ++
T Consensus 337 ~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~--g-~~~~~p~gg~fl~~~~~l~~~~~~~~ 413 (481)
T PTZ00377 337 VVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIE--G-VSCQPVEGAMYAFPRIELPEKAIQEA 413 (481)
T ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--C-cEeecCCeeEEEEeeccCchhhHHHH
Confidence 556666666665432 2345778888888899999999999998862 2 677788899999943 22
Q ss_pred --------HHHHHHHHHhCCeEEeCCC-----------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 378 --------ATQVEKLIKEHSVYLTKDG-----------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 378 --------~~~v~~Ll~e~~Vy~~p~g-----------Ris~agl~~~ni~~la~AI~~vv 419 (420)
.+++..+++++||.++||. |||++ .+++.++...+.|.+.+
T Consensus 414 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~ 473 (481)
T PTZ00377 414 KERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFH 473 (481)
T ss_pred HhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHH
Confidence 2356788899999999851 99998 66667666666666543
No 16
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.80 E-value=1.3e-17 Score=168.65 Aligned_cols=236 Identities=17% Similarity=0.158 Sum_probs=172.4
Q ss_pred ccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC
Q psy16707 141 SVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED 220 (420)
Q Consensus 141 ~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~ 220 (420)
.+....+..+...... .+++|+|++|. ++ .++++.+.++......+ ....|.+..|.++||+++++++....
T Consensus 7 ~~~~~~~~~~~~~~~~--~~~~i~l~~g~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~la~~~~~~~ 78 (382)
T PRK06108 7 ALPESGIREVANAGRG--REGVLPLWFGE---SD--LPTPDFIRDAAAAALAD-GETFYTHNLGIPELREALARYVSRLH 78 (382)
T ss_pred hCCchHHHHHHHHHhc--cCCeEEecCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 3444455555544432 35789999996 43 46678888887776654 34569999999999999999984332
Q ss_pred CccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--
Q psy16707 221 CPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-- 298 (420)
Q Consensus 221 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-- 298 (420)
+..+++++| +.|.||++++.+++..+ +.| ||+|++++|+|++|...++..|++
T Consensus 79 ~~~~~~~~i----------------------~~t~g~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~ 133 (382)
T PRK06108 79 GVATPPERI----------------------AVTSSGVQALMLAAQAL--VGP-GDEVVAVTPLWPNLVAAPKILGARVV 133 (382)
T ss_pred CCCcCcceE----------------------EEeCChHHHHHHHHHHh--cCC-CCEEEEeCCCccchHHHHHHCCCEEE
Confidence 222455655 56999999999988755 447 999999999999999988887654
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 134 ~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 213 (382)
T PRK06108 134 CVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPS 213 (382)
T ss_pred EeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCC
Confidence
Q ss_pred -----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16707 299 -----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGM 337 (420)
Q Consensus 299 -----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m 337 (420)
.........++|...|.++..+|.+. .+.++.+
T Consensus 214 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~------~~~~~~~ 287 (382)
T PRK06108 214 FLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG------EDFVAEL 287 (382)
T ss_pred HhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC------hHHHHHH
Confidence 11112234556777777777767542 2445667
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C--cEEEcc
Q psy16707 338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G--RISMAG 402 (420)
Q Consensus 338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g--Ris~ag 402 (420)
+++++++|+.+.+.|+++. + |....+++|||.|+.++ .+++++|++++||++.|+ + |||++.
T Consensus 288 ~~~~~~~~~~l~~~L~~~~--~-~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~ 364 (382)
T PRK06108 288 VARLRRSRDHLVDALRALP--G-VEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR 364 (382)
T ss_pred HHHHHHHHHHHHHHHHhCC--C-CcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC
Confidence 7999999999999998762 1 77778889999997553 467788889999999874 1 999997
Q ss_pred cCCCCHHHHHHHHHHHh
Q psy16707 403 VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 l~~~ni~~la~AI~~vv 419 (420)
+++.++...+.|++++
T Consensus 365 -~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 365 -DPARLDEAVERLRRFL 380 (382)
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 7777777777777654
No 17
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.79 E-value=1.5e-17 Score=172.83 Aligned_cols=219 Identities=16% Similarity=0.131 Sum_probs=160.6
Q ss_pred CCCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707 159 NVNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 159 ~~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~ 236 (420)
..++|+|++|. |+ +.+++++.+.++............|.|..|+++||+++++++....+..+++++|
T Consensus 51 ~~~~i~l~~G~---P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v------- 120 (430)
T PLN00145 51 PRPVLPLGHGD---PSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDI------- 120 (430)
T ss_pred CCCeeeCCCCC---CCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhE-------
Confidence 56899999994 65 3356677787777776644345689999999999999999986554444555555
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.|+++|+.+++..+. .| ||+|++|+|+|++|...+...|++
T Consensus 121 ---------------~it~G~~~al~l~~~~l~--~~-Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 182 (430)
T PLN00145 121 ---------------YLTAGCAQAIEIIMSVLA--QP-GANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEG 182 (430)
T ss_pred ---------------EEeCCHHHHHHHHHHHhc--CC-CCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHH
Confidence 679999999999988764 47 999999999999999888877664
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 183 l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 262 (430)
T PLN00145 183 VEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISK 262 (430)
T ss_pred HHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEecccc
Confidence
Q ss_pred -----------------hh----------h--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 -----------------KI----------L--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLK 349 (420)
Q Consensus 299 -----------------~~----------~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~ 349 (420)
.. + ....+.+++...|.++..+|.+. ..+.++.++++++++|+.++
T Consensus 263 ~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~ 337 (430)
T PLN00145 263 RWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANT-----KEEFFTKTLGLLKETADICY 337 (430)
T ss_pred ccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHHHHH
Confidence 00 0 01123345677777777777531 13556777799999999999
Q ss_pred HHHHhcCCCCCCcc-cCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHH
Q psy16707 350 DNLQKEGSNKPWNH-ITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGY 410 (420)
Q Consensus 350 ~~L~~~g~~~~w~~-i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~ 410 (420)
+.|++.. + +.. ..+++|||.|+.++ .+++++|++++||.+.||. ||+++ .+ .+.
T Consensus 338 ~~L~~~~--g-~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~-~~---~~~ 410 (430)
T PLN00145 338 EKIKEIK--C-ITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA-ID---PPS 410 (430)
T ss_pred HHHhcCC--C-CCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC-CC---HHH
Confidence 9998762 1 343 36789999997543 3578899999999999972 99998 34 455
Q ss_pred HHHHHHH
Q psy16707 411 LAKAIHA 417 (420)
Q Consensus 411 la~AI~~ 417 (420)
+.+++.+
T Consensus 411 l~~al~r 417 (430)
T PLN00145 411 LEDGLER 417 (430)
T ss_pred HHHHHHH
Confidence 5555443
No 18
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.79 E-value=1.6e-17 Score=171.13 Aligned_cols=238 Identities=18% Similarity=0.132 Sum_probs=168.0
Q ss_pred CChHHHHHHHHHccCCCCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCC
Q psy16707 144 VPSSNLLTEAFKKDTNVNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDC 221 (420)
Q Consensus 144 ~d~i~~l~~~~~~d~~~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~ 221 (420)
.+++..+.+.+.+|.++++|+|++|. +| +.+++++.+.++.....++.....|.|..|.++||+++++++...++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~i~l~~G~---p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g 92 (409)
T PLN00143 16 DDAVKFLKENFNEDDHRLAISFGFGD---PSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLP 92 (409)
T ss_pred HHHHHHHHHhcccCCCCceeeCCCCC---CCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcC
Confidence 44566666667789999999999996 54 55788999988877766544456799999999999999999966544
Q ss_pred ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---
Q psy16707 222 PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--- 298 (420)
Q Consensus 222 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--- 298 (420)
..+++++| +.|.|+++++.+++..+ +.| ||.|++++|+|++|...++..|.+
T Consensus 93 ~~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-gd~v~v~~P~y~~~~~~~~~~g~~~~~ 147 (409)
T PLN00143 93 YQLSPDDV----------------------YLTLGCKHAAEIIIKVL--ARP-EANILLPRPGFPDVETYAIFHHLEIRH 147 (409)
T ss_pred CCCCHhhE----------------------EEecChHHHHHHHHHHH--cCC-CCEEEEcCCCCcCHHHHHHHcCCEEEE
Confidence 34556666 56999999999998765 457 999999999999999988887764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 148 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~ 227 (409)
T PLN00143 148 FDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGL 227 (409)
T ss_pred EeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhh
Confidence
Q ss_pred ----------------------------h----------hhh------hhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 299 ----------------------------K----------ILI------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 299 ----------------------------~----------~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
. .++ +....+++...|.++..+|.+. ..+| +
T Consensus 228 ~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~---~ 302 (409)
T PLN00143 228 FASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKT--TEDF---F 302 (409)
T ss_pred hcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcC--hHHH---H
Confidence 0 001 1112223455666666666431 1234 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC--------
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG-------- 396 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g-------- 396 (420)
++++++++++|+.+.+.|++++. .+....+++|+|.|+.++ .+++..|++++||.+.||.
T Consensus 303 ~~~~~~~~~~~~~~~~~L~~~~~--~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~i 380 (409)
T PLN00143 303 SKTINILRAALAFCYDKLKEIPC--IMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWL 380 (409)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC--CCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeE
Confidence 44457888888889999887642 111235678999997653 3566788899999999962
Q ss_pred cEEEcccCCCCHHHHHHHHHH
Q psy16707 397 RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 397 Ris~agl~~~ni~~la~AI~~ 417 (420)
|||++ .+.+.++.-.+.|.+
T Consensus 381 Ri~~~-~~~~~l~~al~rl~~ 400 (409)
T PLN00143 381 RITFA-VEQSSLEDGLGRLKS 400 (409)
T ss_pred EEEEc-CCHHHHHHHHHHHHH
Confidence 99998 455444444444443
No 19
>PRK09148 aminotransferase; Validated
Probab=99.79 E-value=2.4e-17 Score=169.48 Aligned_cols=236 Identities=14% Similarity=0.171 Sum_probs=165.6
Q ss_pred ccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
+..+..+++..+.+..++ ..+++.|||+.|. ++ +++++.+.++............|.|..|.++||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---p~--~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 81 (405)
T PRK09148 7 IRRLPPYVFEQVNRLKAAARAAGADIIDLGMGN---PD--LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYY 81 (405)
T ss_pred hhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCC---CC--CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHH
Confidence 445556666666555432 2356789999995 43 3446666666665544344679999999999999999998
Q ss_pred cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707 217 YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT 295 (420)
Q Consensus 217 ~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a 295 (420)
....+..++++ +| +.|.|+++++.+++..+ +.| ||+|++++|+|+.|...++..
T Consensus 82 ~~~~g~~~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-gd~Vl~~~P~y~~~~~~~~~~ 136 (405)
T PRK09148 82 ARRFGVKLNPDTQV----------------------VATLGSKEGFANMAQAI--TAP-GDVILCPNPSYPIHAFGFIMA 136 (405)
T ss_pred HHHhCCCCCCCCcE----------------------EEcCChHHHHHHHHHHh--cCC-CCEEEEcCCCCcccHHHHHhc
Confidence 42211123443 45 67999999999998766 457 999999999999999998888
Q ss_pred Ccc-----------------------------------------------------------------------------
Q psy16707 296 GLE----------------------------------------------------------------------------- 298 (420)
Q Consensus 296 G~~----------------------------------------------------------------------------- 298 (420)
|++
T Consensus 137 g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (405)
T PRK09148 137 GGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNP 216 (405)
T ss_pred CCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCC
Confidence 875
Q ss_pred -----------------------------------------h--hhhhh-ccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 299 -----------------------------------------K--ILIRA-FYSSPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 299 -----------------------------------------~--~~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
. ...+. ...+++...|.++..+|+++ .+.+
T Consensus 217 ~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~------~~~~ 290 (405)
T PRK09148 217 PPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGP------QDCI 290 (405)
T ss_pred CCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCc------HHHH
Confidence 1 11122 12344667788787778653 2455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--------HHHHHHHHHhCCeEEeCC--------C--
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------ATQVEKLIKEHSVYLTKD--------G-- 396 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--------~~~v~~Ll~e~~Vy~~p~--------g-- 396 (420)
+.++..++++|+.+.+.|++.| |.+..++.|+|.|+.++ .++.+.|+++.||.+.|+ +
T Consensus 291 ~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~ 366 (405)
T PRK09148 291 AEMRELYKKRRDVLVESFGRAG----WDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYV 366 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeE
Confidence 6667899999999999999876 55567889999997653 355678888999999985 1
Q ss_pred cEEEcccCCCCHHHHHHHH
Q psy16707 397 RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 397 Ris~agl~~~ni~~la~AI 415 (420)
||+++ .+.+.+....+.|
T Consensus 367 Ri~~~-~~~~~l~~al~~l 384 (405)
T PRK09148 367 RIALV-ENEQRIRQAARNI 384 (405)
T ss_pred EEEec-CCHHHHHHHHHHH
Confidence 99987 4444433333333
No 20
>PRK06855 aminotransferase; Validated
Probab=99.78 E-value=1.6e-17 Score=172.53 Aligned_cols=226 Identities=12% Similarity=0.115 Sum_probs=164.7
Q ss_pred CCCCceeecccccccCCC-CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707 158 TNVNKINLGVGAYRDDQG-KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg-~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~ 236 (420)
.+.+++++++|. |++ +..+++.++++...+..+.....|.|..|.++||+++++++-..++..+++++|
T Consensus 30 ~g~~~~~~~~G~---p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I------- 99 (433)
T PRK06855 30 LGVKITWENIGD---PIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDI------- 99 (433)
T ss_pred ccccccccccCC---CcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHE-------
Confidence 345789999995 643 467888888887776544455789999999999999999995443333556665
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH-hhcCcc-----------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC-KHTGLE----------------- 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~-~~aG~~----------------- 298 (420)
+.|.|++.++.+++. + +.| ||.|++++|+|+.|.... ..+|++
T Consensus 100 ---------------~it~G~~~al~~~~~-l--~~~-Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~ 160 (433)
T PRK06855 100 ---------------IFFNGLGDAIAKIYG-L--LRR-EARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLD 160 (433)
T ss_pred ---------------EEcCcHHHHHHHHHH-h--cCC-CCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHH
Confidence 569999999998875 3 457 999999999999997542 233331
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 161 ~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S 240 (433)
T PRK06855 161 DLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKG 240 (433)
T ss_pred HHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEec
Confidence
Q ss_pred ---------------h-----------hhhh------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ---------------K-----------ILIR------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQ 346 (420)
Q Consensus 299 ---------------~-----------~~~r------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~ 346 (420)
. .+.+ ....+++...|.++...|.++ +|.+.+++++..|+++|+
T Consensus 241 ~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~----~~~~~~~~~~~~~~~r~~ 316 (433)
T PRK06855 241 ISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHP----EYKNYLKERNKRYEKRSN 316 (433)
T ss_pred CccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCC----cHHHHHHHHHHHHHHHHH
Confidence 0 0000 012356677777777777653 455677788899999999
Q ss_pred HHHHHHHhcCCCCCCcccCCCCceEEecCCC--------------------------------HHHHHHHHHhCCeEEeC
Q psy16707 347 SLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------------------------------ATQVEKLIKEHSVYLTK 394 (420)
Q Consensus 347 ~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--------------------------------~~~v~~Ll~e~~Vy~~p 394 (420)
.+.+.|++. ++ |....+++|||.|+.++ .+++..|++++||.++|
T Consensus 317 ~~~~~L~~~--~~-~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~P 393 (433)
T PRK06855 317 IAYEKLKDV--PG-LKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVP 393 (433)
T ss_pred HHHHHHhcC--CC-eeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEec
Confidence 999999875 22 66677888999997554 35567888999999999
Q ss_pred CC---------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 395 DG---------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 ~g---------Ris~agl~~~ni~~la~AI~~vv 419 (420)
|. |||+|+.+.+.++.-.+.|.+++
T Consensus 394 G~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~~ 427 (433)
T PRK06855 394 LSSFCTELNGFRVTLLERDEEKFEWIYQTLAEKI 427 (433)
T ss_pred CCcCCCCCCceEEEECCCcHHHHHHHHHHHHHHH
Confidence 71 99999877777766666666543
No 21
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.78 E-value=3.7e-17 Score=167.44 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=172.2
Q ss_pred chhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
++++ ...+.++.+..+.....+. ..++.|||++|. ++ ..+++.++++......+...+.|. ..|.++||++
T Consensus 5 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~a 77 (399)
T PRK07681 5 LATR-MKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGN---PD--MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEA 77 (399)
T ss_pred HhHH-HhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHH
Confidence 4444 4555556666665554322 356889999996 43 356778888877766443445665 4899999999
Q ss_pred HHHHHcCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 212 AAQLAYGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
+++++...++..+++ ++| +.|.|++.++.+++..+ +.| ||.|++++|+|+.|..
T Consensus 78 ia~~~~~~~g~~~~~~~~I----------------------~it~G~~~al~~~~~~~--~~~-Gd~Vlv~~P~y~~~~~ 132 (399)
T PRK07681 78 VTEYYNNTHNVILNADKEV----------------------LLLMGSQDGLVHLPMVY--ANP-GDIILVPDPGYTAYET 132 (399)
T ss_pred HHHHHHHHhCCCCCCCCeE----------------------EECCCcHHHHHHHHHHh--CCC-CCEEEECCCCccchHH
Confidence 999985443333444 455 56999999999988755 457 9999999999999999
Q ss_pred HHhhcCcc------------------------------------------------------------------------
Q psy16707 291 ICKHTGLE------------------------------------------------------------------------ 298 (420)
Q Consensus 291 i~~~aG~~------------------------------------------------------------------------ 298 (420)
+++..|++
T Consensus 133 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~ 212 (399)
T PRK07681 133 GIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFY 212 (399)
T ss_pred HHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhe
Confidence 99988875
Q ss_pred ----------------------------------------------hhh---hhhccCCCchHHHHHHHHHhCChhhHHH
Q psy16707 299 ----------------------------------------------KIL---IRAFYSSPPIHGARIVQEILGDPKLKAQ 329 (420)
Q Consensus 299 ----------------------------------------------~~~---~r~~~s~pp~~ga~iv~~IL~dp~L~~~ 329 (420)
..+ ....-.+++...|.++..+|.+. ..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~ 289 (399)
T PRK07681 213 FDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG---AA 289 (399)
T ss_pred eCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HH
Confidence 111 12122345667777777777653 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C
Q psy16707 330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G 396 (420)
Q Consensus 330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g 396 (420)
| ++.++.+++++|+.+.+.|++.| |....+++|+|.|+.++ .++++.|++++||++.|+ +
T Consensus 290 ~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~ 362 (399)
T PRK07681 290 F---CEKNRGIYQERRDTLVDGFRTFG----WNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEG 362 (399)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCC
Confidence 4 45556889999999999999876 66567789999997543 366788888899999885 2
Q ss_pred --cEEEcccCCCCHHHHHHHHHH
Q psy16707 397 --RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 397 --Ris~agl~~~ni~~la~AI~~ 417 (420)
||+++ .+.+.++...+.|.+
T Consensus 363 ~iRis~~-~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 363 FVRIALV-QDEEVLQQAVENIRN 384 (399)
T ss_pred eEEEEec-CCHHHHHHHHHHHHH
Confidence 99998 456777777777765
No 22
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.78 E-value=4.8e-17 Score=165.27 Aligned_cols=235 Identities=17% Similarity=0.154 Sum_probs=164.8
Q ss_pred ccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
...+..+.+..+.+.+. ++.+++++||++|. ++ +.+++.+.++..........+.|.+..|.++||+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 80 (383)
T TIGR03540 6 IENLPPYLFAEIDKKKAEKKAEGVDVISLGIGD---PD--LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWY 80 (383)
T ss_pred hccCChhHHHHHHHHHHHHHhcCCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 33334444445555553 33567899999995 43 3457778877776554334578999999999999999998
Q ss_pred cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707 217 YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT 295 (420)
Q Consensus 217 ~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a 295 (420)
...++..++++ .| +.|.|+++++.+++..+ +.| ||.|++++|+|++|...++..
T Consensus 81 ~~~~~~~~~~~~~v----------------------i~t~G~~~~l~~~~~~~--~~~-gd~vlv~~P~y~~~~~~~~~~ 135 (383)
T TIGR03540 81 KRRFGVELDPETEV----------------------LSLIGSKEGIAHIPLAF--VNP-GDIVLVPDPGYPVYRIGTLFA 135 (383)
T ss_pred HHhhCCCCCCCCeE----------------------EECCCcHHHHHHHHHHh--CCC-CCEEEEeCCCCcchHHHHHhc
Confidence 53322222333 33 56899999999988755 457 999999999999999999888
Q ss_pred Ccc-----------------------------------------------------------------------------
Q psy16707 296 GLE----------------------------------------------------------------------------- 298 (420)
Q Consensus 296 G~~----------------------------------------------------------------------------- 298 (420)
|++
T Consensus 136 G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 215 (383)
T TIGR03540 136 GGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK 215 (383)
T ss_pred CCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence 765
Q ss_pred -----------------------------------------hhh--hhhc-cCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 299 -----------------------------------------KIL--IRAF-YSSPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 299 -----------------------------------------~~~--~r~~-~s~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
..+ .+.. .++++...+.++..+|.+. .+| +
T Consensus 216 ~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~---~ 289 (383)
T TIGR03540 216 APSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP---QDV---V 289 (383)
T ss_pred CcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---HHH---H
Confidence 111 1222 2344555666666667653 344 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C--cEE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G--RIS 399 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g--Ris 399 (420)
+.++++++++|+.+.+.|++.| |....+++|+|.|+.++ .+++++|++++||.+.|+ + |||
T Consensus 290 ~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris 365 (383)
T TIGR03540 290 KEIRKIYQRRRDLLLEALKKIG----IDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRIS 365 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC----CEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEE
Confidence 5556899999999999999886 66677788999997553 456788888999999985 2 999
Q ss_pred EcccCCCCHHHHHHHHHH
Q psy16707 400 MAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 400 ~agl~~~ni~~la~AI~~ 417 (420)
++ .+. +.+.+++..
T Consensus 366 ~~-~~~---~~l~~~l~~ 379 (383)
T TIGR03540 366 LT-VPD---ERLEEAVAR 379 (383)
T ss_pred ec-CCH---HHHHHHHHH
Confidence 96 443 566666554
No 23
>PRK08960 hypothetical protein; Provisional
Probab=99.78 E-value=3.7e-17 Score=166.58 Aligned_cols=236 Identities=14% Similarity=0.179 Sum_probs=169.6
Q ss_pred ccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
+..+...++..+++..++. ..+++|+|+.|. + .+++++.|.++......+ ....|.|..|.+++|+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~--~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~ 82 (387)
T PRK08960 9 SRDIEPFHVMALLARANELEAAGHDVIHLEIGE---P--DFTTAEPIVAAGQAALAA-GHTRYTAARGLPALREAIAGFY 82 (387)
T ss_pred HHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCC---C--CCCCCHHHHHHHHHHHhc-CCCccCCCCCCHHHHHHHHHHH
Confidence 5556666777766655432 346789999997 3 245678888887776643 3467999999999999999998
Q ss_pred cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707 217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG 296 (420)
Q Consensus 217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG 296 (420)
....+..+++++| +.|.|+++++.+++..+ +.| ||+|++++|+|++|...++..|
T Consensus 83 ~~~~g~~~~~~~i----------------------~it~G~~~al~~~~~~~--~~~-gd~vlv~~p~y~~~~~~~~~~g 137 (387)
T PRK08960 83 AQRYGVDVDPERI----------------------LVTPGGSGALLLASSLL--VDP-GKHWLLADPGYPCNRHFLRLVE 137 (387)
T ss_pred HHHhCCCCChhhE----------------------EEccCcHHHHHHHHHHh--cCC-CCEEEEcCCCCcchHHHHHhcC
Confidence 4322222455655 56999999999988755 457 9999999999999999988877
Q ss_pred cc------------------------------------------------------------------------------
Q psy16707 297 LE------------------------------------------------------------------------------ 298 (420)
Q Consensus 297 ~~------------------------------------------------------------------------------ 298 (420)
.+
T Consensus 138 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~ 217 (387)
T PRK08960 138 GAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA 217 (387)
T ss_pred CeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 64
Q ss_pred ---------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16707 299 ---------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMAD 339 (420)
Q Consensus 299 ---------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~ 339 (420)
..+......+++...|.++..+|.+ ++.+.++.++.
T Consensus 218 ~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-----~~~~~l~~~~~ 292 (387)
T PRK08960 218 SVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEP-----ETLAILEARRA 292 (387)
T ss_pred ChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc-----CcHHHHHHHHH
Confidence 1111222345577788777766653 23456677779
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcc-cCCCCceEEecCC-----C-HHHHHHHHHhCCeEEeCC---------C--cEEEc
Q psy16707 340 RIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTGL-----N-ATQVEKLIKEHSVYLTKD---------G--RISMA 401 (420)
Q Consensus 340 r~~~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~~l-----~-~~~v~~Ll~e~~Vy~~p~---------g--Ris~a 401 (420)
.|+++|+.+.+.|++.| |.. ..+++|+|.|+.+ + .++++.|++++||++.|| + ||+++
T Consensus 293 ~~~~~~~~l~~~L~~~~----~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~ 368 (387)
T PRK08960 293 EFARRRDFLLPALRELG----FGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT 368 (387)
T ss_pred HHHHHHHHHHHHHHhcC----CcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec
Confidence 99999999999999876 443 3567889999644 3 346678888999999985 1 99998
Q ss_pred ccCCCCHHHHHHHHHHH
Q psy16707 402 GVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 402 gl~~~ni~~la~AI~~v 418 (420)
. + .+.+.+++.++
T Consensus 369 ~-~---~~~l~~al~~l 381 (387)
T PRK08960 369 Q-S---LPRLQEAVERI 381 (387)
T ss_pred C-C---HHHHHHHHHHH
Confidence 4 3 46666666553
No 24
>PLN02656 tyrosine transaminase
Probab=99.78 E-value=4.6e-17 Score=167.61 Aligned_cols=235 Identities=19% Similarity=0.153 Sum_probs=166.4
Q ss_pred hHHHHHHHH-HccCCCCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCc
Q psy16707 146 SSNLLTEAF-KKDTNVNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCP 222 (420)
Q Consensus 146 ~i~~l~~~~-~~d~~~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~ 222 (420)
+.+.+.+.. .+..+.++|||++|. |+ ..+++++.++++...+..++....|.|..|.++||+++++++....+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~G~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~ 92 (409)
T PLN02656 16 ILSLLMESIDDEENGKRVISLGMGD---PTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY 92 (409)
T ss_pred HHHHHHHhccccccCCeeeecCCCC---CCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 344444343 334467999999995 65 336778888888877665445679999999999999999998654333
Q ss_pred cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----
Q psy16707 223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---- 298 (420)
Q Consensus 223 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---- 298 (420)
.+++++| +.|.|+++++.+++..+ +.| ||+|++|+|+|+.|....+..|++
T Consensus 93 ~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~i 147 (409)
T PLN02656 93 KLSLDDV----------------------FITSGCTQAIDVALSML--ARP-GANILLPRPGFPIYELCAAFRHLEVRYV 147 (409)
T ss_pred CCCcccE----------------------EEeCChHHHHHHHHHHH--hCC-CCeEEEeCCCCCcHHHHHHHcCCEEEEE
Confidence 3455555 66999999999988765 457 999999999999998888776654
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 227 (409)
T PLN02656 148 DLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVF 227 (409)
T ss_pred eCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHh
Confidence
Q ss_pred ---------------------------h----------hhh------hhccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707 299 ---------------------------K----------ILI------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVK 335 (420)
Q Consensus 299 ---------------------------~----------~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~ 335 (420)
. .++ +..+.+++...|.++..+|++. ..+.++
T Consensus 228 ~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-----~~~~~~ 302 (409)
T PLN02656 228 GSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQT-----DESFFK 302 (409)
T ss_pred cccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcC-----cHHHHH
Confidence 1 111 1224456777888887777531 124466
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCc-ccCCCCceEEecCCC---------H-HHHHHHHHhCCeEEeCCC--------
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLN---------A-TQVEKLIKEHSVYLTKDG-------- 396 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~-~i~~q~GmF~~~~l~---------~-~~v~~Ll~e~~Vy~~p~g-------- 396 (420)
.++.+++++|+.+.+.|++++. +. ...+++|||.|+.++ . +++..++++.||.+.||.
T Consensus 303 ~~~~~~~~~r~~~~~~L~~~~~---~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~i 379 (409)
T PLN02656 303 KTINILKQSSDICCDRIKEIPC---ITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWL 379 (409)
T ss_pred HHHHHHHHHHHHHHHHHhhCCC---CcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeE
Confidence 6678999999999999988642 22 246788999996542 3 567788899999999972
Q ss_pred cEEEcccCCCCHHHHHHHHHH
Q psy16707 397 RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 397 Ris~agl~~~ni~~la~AI~~ 417 (420)
||+++. +++.++.-.+.|.+
T Consensus 380 Ri~~~~-~~e~l~eal~rl~~ 399 (409)
T PLN02656 380 RITFAA-DPSSLEEALGRIKS 399 (409)
T ss_pred EEEeCC-CHHHHHHHHHHHHH
Confidence 999994 54444444443333
No 25
>PRK07550 hypothetical protein; Provisional
Probab=99.78 E-value=5.9e-17 Score=164.91 Aligned_cols=237 Identities=15% Similarity=0.148 Sum_probs=172.5
Q ss_pred ccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 141 SVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 141 ~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
.+.+.+++.+.+.+.+ +.+.+.|||+.|. ++ .++++.+.++...+..+.....|.|..|.++||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (386)
T PRK07550 8 ALFPPPIPEVRAWLAGYDGADGPLIDLSQAV---PG--YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR 82 (386)
T ss_pred hcCChHHHHHHHHHHHHhhcCCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 3344456666555432 3456789999996 33 345677777777665433456899999999999999999864
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.++..+.+++| +.|.|+++++.+++..+ +.| ||+|++++|+|++|..+++..|++
T Consensus 83 ~~g~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~g~~ 137 (386)
T PRK07550 83 LYGAAISPEQV----------------------HITSGCNQAFWAAMVTL--AGA-GDEVILPLPWYFNHKMWLDMLGIR 137 (386)
T ss_pred HhCCCCCcceE----------------------EEecCcHHHHHHHHHHh--cCC-CCEEEEcCCCCcchHHHHHhcCCE
Confidence 44433555655 56999999999998766 457 999999999999999998888775
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 138 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~ 217 (386)
T PRK07550 138 PVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHD 217 (386)
T ss_pred EEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcc
Confidence
Q ss_pred -----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16707 299 -----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGM 337 (420)
Q Consensus 299 -----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m 337 (420)
.........++|..+|.++..+|++ +.+.++.+
T Consensus 218 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~------~~~~~~~~ 291 (386)
T PRK07550 218 LFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN------LADWRAGN 291 (386)
T ss_pred hhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc------HHHHHHHH
Confidence 1222334456788888888877754 23445556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----C-HHHHHHHHHhCCeEEeCC--------C--cEEEc
Q psy16707 338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----N-ATQVEKLIKEHSVYLTKD--------G--RISMA 401 (420)
Q Consensus 338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~-~~~v~~Ll~e~~Vy~~p~--------g--Ris~a 401 (420)
+++++++|+.+.+.|++.. .|. +.+++|+|.|+.+ + .+++++|++++||.+.|+ + ||+++
T Consensus 292 ~~~~~~~~~~l~~~L~~~~---~~~-~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~ 367 (386)
T PRK07550 292 RAEIARRRDAFRAVFARLP---GWE-LLASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA 367 (386)
T ss_pred HHHHHHHHHHHHHHHHhCC---Cce-eCCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee
Confidence 6899999999999998862 154 3467889999633 3 356688888999999984 1 99999
Q ss_pred ccCCCCHHHHHHHHHH
Q psy16707 402 GVTSKNVGYLAKAIHA 417 (420)
Q Consensus 402 gl~~~ni~~la~AI~~ 417 (420)
..++++++...+.|.+
T Consensus 368 ~~~~~~~~~~~~~l~~ 383 (386)
T PRK07550 368 NADVAGIGELVERLRA 383 (386)
T ss_pred cCCHHHHHHHHHHHHh
Confidence 8787777777777665
No 26
>PRK07337 aminotransferase; Validated
Probab=99.77 E-value=4.5e-17 Score=165.90 Aligned_cols=239 Identities=12% Similarity=0.156 Sum_probs=166.8
Q ss_pred chhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
|+++ +..+..+.+..+.+...+ ..+++.|+|++|. ++ +++++.+.++......+ ....|.+..|.++||++
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ 75 (388)
T PRK07337 3 LAAR-VDAIEPFYVMELAKEAQALERAGRDIIHMGIGE---PD--FTAPEPVVEAAARALRR-GVTQYTSALGLAPLREA 75 (388)
T ss_pred hhhH-hHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHH
Confidence 4444 555555655555544432 2457889999996 43 44567777777665543 45789999999999999
Q ss_pred HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+++++....+..+++++| +.|.|++.|+.+++..+ +.| ||+|++++|+|++|...
T Consensus 76 ia~~~~~~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~ 130 (388)
T PRK07337 76 IAAWYARRFGLDVAPERI----------------------VVTAGASAALLLACLAL--VER-GDEVLMPDPSYPCNRHF 130 (388)
T ss_pred HHHHHHHHhCCCCChHhE----------------------EEecCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhhHHH
Confidence 999984433333455655 56999999999988755 457 99999999999999988
Q ss_pred HhhcCcc-------------------------------------------------------------------------
Q psy16707 292 CKHTGLE------------------------------------------------------------------------- 298 (420)
Q Consensus 292 ~~~aG~~------------------------------------------------------------------------- 298 (420)
++..|++
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~ 210 (388)
T PRK07337 131 VAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSY 210 (388)
T ss_pred HHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccccccc
Confidence 8877653
Q ss_pred --------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 299 --------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 299 --------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
.........+++..+|.++..++.+.. .+.+
T Consensus 211 ~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-----~~~~ 285 (388)
T PRK07337 211 DAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDT-----LAIY 285 (388)
T ss_pred CCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCc-----hHHH
Confidence 111123334567778877777665421 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcc-cCCCCceEEecCC---------CH-HHHHHHHHhCCeEEeCC--------
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTGL---------NA-TQVEKLIKEHSVYLTKD-------- 395 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~~l---------~~-~~v~~Ll~e~~Vy~~p~-------- 395 (420)
++++..|+++|+.+.+.|++.| +.. ..+++|+|.|+.+ ++ +++++|++++||.+.||
T Consensus 286 ~~~~~~~~~~r~~~~~~L~~~~----~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~ 361 (388)
T PRK07337 286 ERRRAEFKRRRDFIVPALESLG----FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAP 361 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 5667899999999999999876 332 3567899999754 33 45678889999999874
Q ss_pred -C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 396 -G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 396 -g--Ris~agl~~~ni~~la~AI~~ 417 (420)
+ ||+++. + .+.+.++|++
T Consensus 362 ~~~~Ri~~~~-~---~~~l~~~l~r 382 (388)
T PRK07337 362 RDYIRLSYAT-S---MSRLEEAVAR 382 (388)
T ss_pred CCEEEEEecC-C---HHHHHHHHHH
Confidence 1 999984 4 4555555544
No 27
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.77 E-value=4.2e-17 Score=173.09 Aligned_cols=246 Identities=12% Similarity=0.124 Sum_probs=170.2
Q ss_pred ccchhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCC-CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHH
Q psy16707 132 IRFQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQG-KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDF 208 (420)
Q Consensus 132 ~~~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg-~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~f 208 (420)
|..|++ +..+..+.+..+.+.++.. .+.++|+|++|. |+. .+++++.+.++...... ..+.|++..|+++|
T Consensus 117 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~---p~~~~~~~p~~~~~~~~~~~~--~~~~Y~~~~G~~~l 190 (517)
T PRK13355 117 FKKSHK-LDNVLYDVRGPVVDEANRMEAAGTHILKLNIGN---PAPFGFRTPDEVVYDMAQQLT--DTEGYSDSKGLFSA 190 (517)
T ss_pred CChhHH-hhccCccHHHHHHHHHHHHHHcCCCeEEecCcC---CCcCCCCCCHHHHHHHHHHhh--cCCCCCCCcChHHH
Confidence 345666 7777777666555554432 357899999996 542 14566666666655443 35689999999999
Q ss_pred HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
|+++++++.......+++++| +.|.|+++++.+++..+ +.| ||+|++|+|+|+.|
T Consensus 191 Reaia~~~~~~~~~~~~~~~I----------------------~it~G~~eal~~~~~~l--~~~-Gd~Vli~~P~y~~y 245 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVDDI----------------------YTGNGVSELINLSMSAL--LDD-GDEVLIPSPDYPLW 245 (517)
T ss_pred HHHHHHHHHhcCCCCCChhHE----------------------EEeCcHHHHHHHHHHHh--CCC-CCEEEEcCCCCcCH
Confidence 999999985444333455555 66999999999988755 458 99999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
...++.+|++
T Consensus 246 ~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~ 325 (517)
T PRK13355 246 TACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDR 325 (517)
T ss_pred HHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhh
Confidence 9999988875
Q ss_pred ------------------------------------------h-------hh------hhhccCCCchHHHHHHHHHhCC
Q psy16707 299 ------------------------------------------K-------IL------IRAFYSSPPIHGARIVQEILGD 323 (420)
Q Consensus 299 ------------------------------------------~-------~~------~r~~~s~pp~~ga~iv~~IL~d 323 (420)
. .+ ......+++..+|.++..+|.+
T Consensus 326 ~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~ 405 (517)
T PRK13355 326 LVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGG 405 (517)
T ss_pred hcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcC
Confidence 0 00 1112245567778777777765
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCC---------CHHHHHHHHHhCCeEEe
Q psy16707 324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGL---------NATQVEKLIKEHSVYLT 393 (420)
Q Consensus 324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l---------~~~~v~~Ll~e~~Vy~~ 393 (420)
... +.+.++.+ .++.++|+.+.+.|+++ | +....+++|||.|..+ +.+++..|++++||.+.
T Consensus 406 ~~~---~~~~~~~~-~~~~~~r~~l~~~L~~~~g----~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~ 477 (517)
T PRK13355 406 HQS---VKDYLVPG-GRVYEQRELVYNALNAIPG----ISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIV 477 (517)
T ss_pred Ccc---HHHHHHHH-HHHHHHHHHHHHHHhcCCC----cccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEe
Confidence 322 22333333 34556789999999887 4 6677888899998544 24677888899999999
Q ss_pred CC------C----cEEEcccCCCCHHHHHHHHHH
Q psy16707 394 KD------G----RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 394 p~------g----Ris~agl~~~ni~~la~AI~~ 417 (420)
|| + ||+++ .+++.++.-.+.|.+
T Consensus 478 pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~rl~~ 510 (517)
T PRK13355 478 QGTGFNWDKPDHFRVVYL-PRLEDLEDAMDRLAD 510 (517)
T ss_pred CcchhCCCCcCEEEEEeC-CCHHHHHHHHHHHHH
Confidence 85 1 99996 455554444444443
No 28
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.77 E-value=7.7e-17 Score=163.84 Aligned_cols=240 Identities=16% Similarity=0.137 Sum_probs=165.7
Q ss_pred chhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
|+++ +..+.+.+...+.+..++ ..++++|||+.|. ++ +.+++.+.++......+.....|.+..|+++||++
T Consensus 4 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~a 77 (385)
T PRK09276 4 LADR-IKNLPPYLFAEIDKKKAEKIARGVDVISLGIGD---PD--LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKA 77 (385)
T ss_pred hhhH-hhhCCccHHHHHHHHHHHHHhcCCCEEEecCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHH
Confidence 4444 555555555554444332 2456789999995 43 45677788887776544345789999999999999
Q ss_pred HHHHHcCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 212 AAQLAYGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
+++++....+..++++ .| +.|.|+++++.+++..+ +.| ||+|++++|+|+.|..
T Consensus 78 ia~~~~~~~g~~~~~~~~i----------------------i~t~G~~~~i~~~~~~~--~~~-gd~Vl~~~P~y~~~~~ 132 (385)
T PRK09276 78 VADWYKRRFGVELDPETEV----------------------ISLIGSKEGIAHIPLAF--VNP-GDVVLVPDPGYPVYKI 132 (385)
T ss_pred HHHHHHHHhCCCCCCCCcE----------------------EEccCcHHHHHHHHHHh--CCC-CCEEEEcCCCCcChHH
Confidence 9999853222223333 23 56899999999988765 457 9999999999999999
Q ss_pred HHhhcCcc------------------------------------------------------------------------
Q psy16707 291 ICKHTGLE------------------------------------------------------------------------ 298 (420)
Q Consensus 291 i~~~aG~~------------------------------------------------------------------------ 298 (420)
.++..|++
T Consensus 133 ~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~ 212 (385)
T PRK09276 133 GTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIA 212 (385)
T ss_pred HHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhhee
Confidence 98887764
Q ss_pred ----------------------------------------------h--hhhhhc-cCCCchHHHHHHHHHhCChhhHHH
Q psy16707 299 ----------------------------------------------K--ILIRAF-YSSPPIHGARIVQEILGDPKLKAQ 329 (420)
Q Consensus 299 ----------------------------------------------~--~~~r~~-~s~pp~~ga~iv~~IL~dp~L~~~ 329 (420)
. ...+.. .++++...+.++..+|.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~------ 286 (385)
T PRK09276 213 YDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG------ 286 (385)
T ss_pred cCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC------
Confidence 0 111222 223344455555555643
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C
Q psy16707 330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G 396 (420)
Q Consensus 330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g 396 (420)
+.+.++.++++++++|+.+.+.|++.| +....+++|+|.|+.++ .+++++|++++||++.|+ +
T Consensus 287 ~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~ 362 (385)
T PRK09276 287 PQEVVEELRKIYQERRDILVEGLRKLG----LEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEG 362 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCC
Confidence 234566677999999999999999876 55566778888887553 355688888999999985 2
Q ss_pred --cEEEcccCCCCHHHHHHHHHHH
Q psy16707 397 --RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 397 --Ris~agl~~~ni~~la~AI~~v 418 (420)
||+++ .++ +.+.++|++.
T Consensus 363 ~~Ris~~-~~~---~~l~~~l~~l 382 (385)
T PRK09276 363 YFRIALT-VPD---ERIEEAVERI 382 (385)
T ss_pred eEEEEeC-CCH---HHHHHHHHHH
Confidence 99997 443 5666666553
No 29
>PRK08068 transaminase; Reviewed
Probab=99.77 E-value=8.3e-17 Score=164.15 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=159.6
Q ss_pred ccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
+..+....+..+..... ....++.|||+.|. ++. +.++.++++......+.....|.|..|.++||+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---p~~--~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~ 83 (389)
T PRK08068 9 LKQLPKQFFASLVAKVNKKVAEGHDVINLGQGN---PDQ--PTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFY 83 (389)
T ss_pred hhhcCccHHHHHHHHHHHHHhcCCCeEEecCCC---CCC--CCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 34444444444444332 12245789999995 544 456677777776654434578999999999999999998
Q ss_pred cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707 217 YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT 295 (420)
Q Consensus 217 ~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a 295 (420)
....+..++++ .| +.|.||+.++.+++..+ +.| ||+|++|+|+|++|...++..
T Consensus 84 ~~~~g~~~~~~~~i----------------------~it~G~~~~l~~~~~~~--~~~-gd~vlv~~P~y~~~~~~~~~~ 138 (389)
T PRK08068 84 KREYGVTLDPETEV----------------------AILFGGKAGLVELPQCL--MNP-GDTILVPDPGYPDYLSGVALA 138 (389)
T ss_pred HHHhCCCCCCCccE----------------------EEcCCcHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHhc
Confidence 43222223444 34 56999999998877644 457 999999999999999999888
Q ss_pred Ccc-----------------------------------------------------------------------------
Q psy16707 296 GLE----------------------------------------------------------------------------- 298 (420)
Q Consensus 296 G~~----------------------------------------------------------------------------- 298 (420)
|++
T Consensus 139 g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~ 218 (389)
T PRK08068 139 RAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218 (389)
T ss_pred CCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence 875
Q ss_pred -----------------------------------------h--hhhhhcc-CCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 299 -----------------------------------------K--ILIRAFY-SSPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 299 -----------------------------------------~--~~~r~~~-s~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
. ...+..+ .+++...|.++...|.+. . +++
T Consensus 219 ~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~---~~~ 292 (389)
T PRK08068 219 PVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSD---Q---SCV 292 (389)
T ss_pred CcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCc---H---HHH
Confidence 1 1112222 233433455555555332 1 456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C--cEE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G--RIS 399 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g--Ris 399 (420)
+.++++++++|+.+.+.|++.| |...++++|+|.|+.++ .++.+.|++++||++.|+ + ||+
T Consensus 293 ~~~~~~~~~~r~~~~~~L~~~g----~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~ 368 (389)
T PRK08068 293 AELVARYESRRNAFISACREIG----WEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVG 368 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEE
Confidence 6777999999999999999987 66667788899887543 356688887899999884 1 999
Q ss_pred EcccCCCCHHHHHHHHHH
Q psy16707 400 MAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 400 ~agl~~~ni~~la~AI~~ 417 (420)
++ .++ +.+.+++.+
T Consensus 369 ~~-~~~---~~l~~al~~ 382 (389)
T PRK08068 369 LL-TDE---ERLREAVER 382 (389)
T ss_pred Ec-CCH---HHHHHHHHH
Confidence 96 343 555555554
No 30
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.77 E-value=7.4e-17 Score=162.93 Aligned_cols=238 Identities=13% Similarity=0.174 Sum_probs=169.1
Q ss_pred ccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 132 IRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 132 ~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
|+||.+ ++....+++..+.....+. ..++|||++|. ++. +.++.++++...+.. ...|.+..|.++||++
T Consensus 1 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~---p~~--~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ 70 (364)
T PRK07865 1 MPVSAR-LPDFPWDTLAPAKATAAAH-PDGIVDLSVGT---PVD--PVPPVIQEALAAAAD---APGYPTTAGTPELREA 70 (364)
T ss_pred CCcccc-CCCccHHHHHHHHHHHHhc-CCCEEEcCCCC---CCC--CCCHHHHHHHHHHHh---hCCCCCccCCHHHHHH
Confidence 567877 7777888888877666543 34689999996 443 556788888766532 3589999999999999
Q ss_pred HHHHHcCCCCcc-ccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 212 AAQLAYGEDCPQ-LKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 212 ~~~~~~g~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
+++++....+.. +++++| +.|.|+++++.+++.++. +.| ||.|++++|+|+.|..
T Consensus 71 ia~~l~~~~~~~~~~~~~I----------------------~it~G~~~~i~~~~~~l~-~~~-gd~Vl~~~p~y~~~~~ 126 (364)
T PRK07865 71 IVGWLARRRGVTGLDPAAV----------------------LPVIGSKELVAWLPTLLG-LGP-GDVVVIPELAYPTYEV 126 (364)
T ss_pred HHHHHHHHcCCCCCCcccE----------------------EEccChHHHHHHHHHHHc-CCC-CCEEEECCCCcccHHH
Confidence 999995443322 455655 669999999998776552 457 9999999999999999
Q ss_pred HHhhcCcc------------------------------------------------------------------------
Q psy16707 291 ICKHTGLE------------------------------------------------------------------------ 298 (420)
Q Consensus 291 i~~~aG~~------------------------------------------------------------------------ 298 (420)
.++..|++
T Consensus 127 ~~~~~g~~~~~~~~~~~l~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 206 (364)
T PRK07865 127 GARLAGATVVRADSLTELGPQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPR 206 (364)
T ss_pred HHHhcCCEEEecCChhhCCcccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcccccc
Confidence 99988875
Q ss_pred ------------------------------------hh---hhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16707 299 ------------------------------------KI---LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMAD 339 (420)
Q Consensus 299 ------------------------------------~~---~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~ 339 (420)
.. .......++|...|.++..+|.+ .+ .++.++.
T Consensus 207 ~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~---~~~~~~~ 279 (364)
T PRK07865 207 VCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGD----DA---HVREQRE 279 (364)
T ss_pred ccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC----HH---HHHHHHH
Confidence 00 01112223456677766666654 22 3456668
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--CHHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCC
Q psy16707 340 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKN 407 (420)
Q Consensus 340 r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~n 407 (420)
+++++|+.+.+.|++.| |....+++|+|.|+.+ +...+..+++++||++.|+ + ||++++ +.++
T Consensus 280 ~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~ 354 (364)
T PRK07865 280 RYARRRAVLRPALEAAG----FRVDHSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-TDER 354 (364)
T ss_pred HHHHHHHHHHHHHHHcC----CcccCCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-CHHH
Confidence 99999999999999876 5556678899999765 3344444457899999884 1 999985 4455
Q ss_pred HHHHHHHH
Q psy16707 408 VGYLAKAI 415 (420)
Q Consensus 408 i~~la~AI 415 (420)
+++..+.|
T Consensus 355 ~~~~~~~l 362 (364)
T PRK07865 355 IAAAVERL 362 (364)
T ss_pred HHHHHHHh
Confidence 55544443
No 31
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.77 E-value=8.3e-17 Score=165.17 Aligned_cols=238 Identities=14% Similarity=0.138 Sum_probs=162.7
Q ss_pred ccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 141 SVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 141 ~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
.+..+++..+.+.+++- ..++.+||++|. +++. .+...+.++.+.+ .+.....|.+..|.++||+++++++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~---p~~~-~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lR~~ia~~l~~ 86 (403)
T PRK08636 12 RLPKYVFAEVNELKMAARRAGEDIIDFSMGN---PDGP-TPQHIIDKLCESA-QKPKTHGYSVSKGIYKLRLAICNWYKR 86 (403)
T ss_pred hCCccHHHHHHHHHHHHHhcCCCEEEcCCcC---CCCC-CCHHHHHHHHHHh-cCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence 44555666565554322 346789999995 6653 2333444444333 223467999999999999999999843
Q ss_pred CCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 219 EDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 219 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
.++..++++ +| +.|.|+++++.+++..+ +.| ||.|++++|+|++|..+++..|+
T Consensus 87 ~~~~~~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-gd~Vlv~~P~y~~~~~~~~~~g~ 141 (403)
T PRK08636 87 KYNVDLDPETEV----------------------VATMGSKEGYVHLVQAI--TNP-GDVAIVPDPAYPIHSQAFILAGG 141 (403)
T ss_pred HhCCCCCCCCeE----------------------EECCChHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHhcCC
Confidence 322223443 45 66999999999998766 457 99999999999999988887665
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 142 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~ 221 (403)
T PRK08636 142 NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADIT 221 (403)
T ss_pred EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhc
Confidence 4
Q ss_pred ----------------------------------------------hhh--hhh-ccCCCchHHHHHHHHHhCChhhHHH
Q psy16707 299 ----------------------------------------------KIL--IRA-FYSSPPIHGARIVQEILGDPKLKAQ 329 (420)
Q Consensus 299 ----------------------------------------------~~~--~r~-~~s~pp~~ga~iv~~IL~dp~L~~~ 329 (420)
..+ .+. ...+++...|.++..++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~----- 296 (403)
T PRK08636 222 FDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGD----- 296 (403)
T ss_pred cCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCc-----
Confidence 111 111 11233445555555545421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--------HHHHHHHHHhCCeEEeCC------
Q psy16707 330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------ATQVEKLIKEHSVYLTKD------ 395 (420)
Q Consensus 330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--------~~~v~~Ll~e~~Vy~~p~------ 395 (420)
.+.++.+++.|+++|+.+.+.|+..| |.+..+++|+|.|+.++ .++++.+++++||.+.|+
T Consensus 297 -~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~ 371 (403)
T PRK08636 297 -QSCVEEIRETYRKRRDVLIESFANAG----WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEY 371 (403)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcC
Confidence 24466677999999999999999876 66677889999998664 356678888999999996
Q ss_pred --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ ||+++ .++++++...+.|.+++
T Consensus 372 ~~~~iRi~~~-~~~~~l~~~~~rl~~~l 398 (403)
T PRK08636 372 GDEYVRIALI-ENENRIRQAARNIKKFL 398 (403)
T ss_pred CCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence 1 99998 66666655555555543
No 32
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.76 E-value=1e-16 Score=164.40 Aligned_cols=245 Identities=14% Similarity=0.131 Sum_probs=171.3
Q ss_pred cchhhhccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707 133 RFQDARTSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK 210 (420)
Q Consensus 133 ~~~~~~~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~ 210 (420)
.|+++ ...+..+....+.+.++ ...++++|||++|. ++ +++++.+.++...+..+ ....|.|+.|.++||+
T Consensus 5 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~ 77 (402)
T PRK06107 5 VPAAR-VSRIKPSPSTAAAARARELRAAGRSIVDLTVGE---PD--FDTPDHIKQAAVAAIER-GETKYTLVNGTPALRK 77 (402)
T ss_pred hhhHH-hhhcCccHHHHHHHHHHHHHhccCCEEEcCCCC---CC--CCCCHHHHHHHHHHHHc-CCCCCCCCCCCHHHHH
Confidence 34444 44444444434333322 12356889999997 33 45678888887777653 4568999999999999
Q ss_pred HHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 211 LAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 211 a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
++++++....+..+.+++| +.|.|+++|+.+++..+ +.| ||+|++|+|+|+.|..
T Consensus 78 ~ia~~l~~~~g~~~~~~~i----------------------~~t~G~~~al~~~~~~~--~~~-gd~vl~~~p~y~~y~~ 132 (402)
T PRK06107 78 AIIAKLERRNGLHYADNEI----------------------TVGGGAKQAIFLALMAT--LEA-GDEVIIPAPYWVSYPD 132 (402)
T ss_pred HHHHHHHHhcCCCCChhhE----------------------EEeCCHHHHHHHHHHHh--cCC-CCEEEEecCCCcCHHH
Confidence 9999884332222345555 56999999999987643 557 9999999999999988
Q ss_pred HHhhcCcc------------------------------------------------------------------------
Q psy16707 291 ICKHTGLE------------------------------------------------------------------------ 298 (420)
Q Consensus 291 i~~~aG~~------------------------------------------------------------------------ 298 (420)
.+..+|+.
T Consensus 133 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l 212 (402)
T PRK06107 133 MVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHI 212 (402)
T ss_pred HHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcccc
Confidence 77766542
Q ss_pred ---------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhH
Q psy16707 299 ---------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLK 327 (420)
Q Consensus 299 ---------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~ 327 (420)
.......-.+++...|.++..+|.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--- 289 (402)
T PRK06107 213 RFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGD--- 289 (402)
T ss_pred ccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCC---
Confidence 11112223456778888888878542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---------------C-HHHHHHHHHhCCeE
Q psy16707 328 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---------------N-ATQVEKLIKEHSVY 391 (420)
Q Consensus 328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---------------~-~~~v~~Ll~e~~Vy 391 (420)
..| ++.++++++++|+.+.+.|++.+ + +...++++|||.|+.+ + .++++.|++++||.
T Consensus 290 ~~~---~~~~~~~~~~~~~~~~~~L~~~~--g-~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~ 363 (402)
T PRK06107 290 QSF---VTESVAVYKQRRDYALALLNAIP--G-LSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVA 363 (402)
T ss_pred hHH---HHHHHHHHHHHHHHHHHHHhcCC--C-CcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEE
Confidence 234 55566899999999999998862 1 6667788999999753 2 35678899999999
Q ss_pred EeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 392 LTKDG--------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 392 ~~p~g--------Ris~agl~~~ni~~la~AI~~vv 419 (420)
+.||. |||++. +.++++...+.|.+++
T Consensus 364 v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~~~l 398 (402)
T PRK06107 364 VVQGTAYGLSPYFRLSIAT-SLETLEEACARIERAV 398 (402)
T ss_pred EeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 99972 999994 6677666666665543
No 33
>PRK07682 hypothetical protein; Validated
Probab=99.76 E-value=1.2e-16 Score=161.94 Aligned_cols=232 Identities=16% Similarity=0.155 Sum_probs=163.4
Q ss_pred CChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcc
Q psy16707 144 VPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQ 223 (420)
Q Consensus 144 ~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~ 223 (420)
..++..+.+.... .++.|+|++|. ++ +.+++.+.++......+ ....|.|..|.++||+++++++....+..
T Consensus 6 ~~~~~~~~~~~~~--~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~ 77 (378)
T PRK07682 6 PSGIRKFFDLAAN--MEGVISLGVGE---PD--FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVS 77 (378)
T ss_pred ccHHHHHHHHHHh--cCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Confidence 3344444444322 24789999997 43 23455666666555433 35779999999999999999995332222
Q ss_pred ccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----
Q psy16707 224 LKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---- 298 (420)
Q Consensus 224 ~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---- 298 (420)
++++ .| +.|.||++|+.+++..+ +.| ||+|++++|+|+.|...++..|.+
T Consensus 78 ~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~~~ 132 (378)
T PRK07682 78 YDPNDEI----------------------IVTVGASQALDVAMRAI--INP-GDEVLIVEPSFVSYAPLVTLAGGVPVPV 132 (378)
T ss_pred CCCCCcE----------------------EEeCChHHHHHHHHHHh--CCC-CCEEEEeCCCchhhHHHHHHcCCEEEEe
Confidence 3332 34 67999999999988755 557 999999999999999998877653
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 133 ~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 212 (378)
T PRK07682 133 ATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIK 212 (378)
T ss_pred ecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcc
Confidence
Q ss_pred ------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q psy16707 299 ------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRII 342 (420)
Q Consensus 299 ------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~ 342 (420)
.........++|...|.++..+|++. . .+++.++++++
T Consensus 213 ~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~---~~~~~~~~~~~ 286 (378)
T PRK07682 213 GMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAG---N---DDVIRMRDSYR 286 (378)
T ss_pred cccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCC---h---HHHHHHHHHHH
Confidence 11112233456777888777777542 1 23667779999
Q ss_pred HHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCC
Q psy16707 343 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSK 406 (420)
Q Consensus 343 ~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ 406 (420)
++|+.+.+.|++.| +....+++|+|.|..+ +. ++++.|++++||++.|| + |||++. +.+
T Consensus 287 ~~~~~~~~~L~~~~----~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~ 361 (378)
T PRK07682 287 KRRNFFVTSFNEIG----LTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLE 361 (378)
T ss_pred HHHHHHHHHHHHCC----CccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHH
Confidence 99999999999987 5556778899998633 33 56678888999999985 1 999985 566
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
.++...+.|.+++
T Consensus 362 ~l~~~l~~l~~~l 374 (378)
T PRK07682 362 QLQEAMKRMKRFV 374 (378)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666666553
No 34
>PRK07683 aminotransferase A; Validated
Probab=99.76 E-value=1.4e-16 Score=162.63 Aligned_cols=235 Identities=14% Similarity=0.178 Sum_probs=166.5
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+..+...++..+...+. ..+++|||++|. ++ +++++.++++...+..+ ....|.|..|.++||+++++++..
T Consensus 9 ~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~---p~--~~~~~~~~~a~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~ 80 (387)
T PRK07683 9 VKDIQISGIRQFSNMVQ--NYDNLISLTIGQ---PD--FPTPSHVKEAAKRAITE-NYTSYTHNAGLLELRKAACNFVKD 80 (387)
T ss_pred HHhCCccHHHHHHHHHH--hcCCeEEecCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHH
Confidence 34444555555555553 345789999996 43 46677888888877653 457899999999999999999853
Q ss_pred CCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 219 EDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 219 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
.++..++++ +| +.|.|+++|+.+++..+ +.| ||+|++|+|+|++|...++..|+
T Consensus 81 ~~g~~~~~~~~I----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~~~~~g~ 135 (387)
T PRK07683 81 KYDLHYSPESEI----------------------IVTIGASEAIDIAFRTI--LEP-GTEVILPAPIYPGYEPIIRLCGA 135 (387)
T ss_pred HhCCCCCCCCcE----------------------EEeCChHHHHHHHHHHh--CCC-CCEEEEcCCCccchHHHHHHcCC
Confidence 322223333 44 67999999999988755 457 99999999999999999998877
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 136 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 215 (387)
T PRK07683 136 KPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSI 215 (387)
T ss_pred EEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCCh
Confidence 5
Q ss_pred ----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q psy16707 299 ----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMA 338 (420)
Q Consensus 299 ----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~ 338 (420)
.......+.+++...|.++..+|.+.. .+++.++
T Consensus 216 ~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~ 289 (387)
T PRK07683 216 AHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGK------DDAKMMR 289 (387)
T ss_pred hhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCCh------HHHHHHH
Confidence 111122334456677887777775431 2456667
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC--------C--cEEEcc
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD--------G--RISMAG 402 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~ag 402 (420)
.+++++|+.+.+.|++.| +....+++|+|.|..+ ++ +++..|++++||.+.|+ + ||+++.
T Consensus 290 ~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~ 365 (387)
T PRK07683 290 HQYKKRRDYVYNRLISMG----LDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY 365 (387)
T ss_pred HHHHHHHHHHHHHHHHcC----CcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC
Confidence 899999999999998876 5666788899998633 33 45678889999999885 1 999984
Q ss_pred cCCCCHHHHHHHHHH
Q psy16707 403 VTSKNVGYLAKAIHA 417 (420)
Q Consensus 403 l~~~ni~~la~AI~~ 417 (420)
+.+.+....+.|.+
T Consensus 366 -~~~~~~~al~~l~~ 379 (387)
T PRK07683 366 -SIETLKEGLDRLEA 379 (387)
T ss_pred -CHHHHHHHHHHHHH
Confidence 44444433333333
No 35
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.76 E-value=1.4e-16 Score=162.85 Aligned_cols=244 Identities=15% Similarity=0.224 Sum_probs=174.3
Q ss_pred cccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707 131 PIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK 210 (420)
Q Consensus 131 p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~ 210 (420)
+..|+++ +..+..+.+..+.+.. ...++.||++.|. ++ +.+++.+.++......+ ....|.|..|.++||+
T Consensus 4 ~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~ 74 (391)
T PRK07309 4 TKRFNKQ-LDKIEVSLIRQFDQSI--SDIPGILKLTLGE---PD--FTTPDHVKEAAKRAIDA-NQSHYTGMAGLLELRQ 74 (391)
T ss_pred hhHHHhh-hhhcCccHHHHHHHHH--HhcCCeEEcCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHH
Confidence 3456666 6677777776666544 2236789999997 43 45577788887766543 3457999999999999
Q ss_pred HHHHHHcCCCCcccc-CCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 211 LAAQLAYGEDCPQLK-DNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 211 a~~~~~~g~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
++++++...++..+. +++| +.|.|+++++.+++..+ +.| ||+|++++|+|++|.
T Consensus 75 ~ia~~~~~~~~~~~~~~~~i----------------------~it~G~~~al~~~~~~~--~~~-gd~vl~~~p~y~~~~ 129 (391)
T PRK07309 75 AAADFVKEKYNLDYAPENEI----------------------LVTIGATEALSASLTAI--LEP-GDKVLLPAPAYPGYE 129 (391)
T ss_pred HHHHHHHHHhCCCCCCCCcE----------------------EEeCChHHHHHHHHHHh--cCC-CCEEEEeCCCCcchH
Confidence 999998654433233 2344 67999999999988755 457 999999999999999
Q ss_pred HHHhhcCcc-----------------------------------------------------------------------
Q psy16707 290 PICKHTGLE----------------------------------------------------------------------- 298 (420)
Q Consensus 290 ~i~~~aG~~----------------------------------------------------------------------- 298 (420)
.+++..|.+
T Consensus 130 ~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~ 209 (391)
T PRK07309 130 PIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYS 209 (391)
T ss_pred HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEcccc
Confidence 999888774
Q ss_pred -----------------------------------------------hhh--h-hhccCCCchHHHHHHHHHhCChhhHH
Q psy16707 299 -----------------------------------------------KIL--I-RAFYSSPPIHGARIVQEILGDPKLKA 328 (420)
Q Consensus 299 -----------------------------------------------~~~--~-r~~~s~pp~~ga~iv~~IL~dp~L~~ 328 (420)
..+ . .....+++...+.++..+|.+. .
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~ 286 (391)
T PRK07309 210 ELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNG---K 286 (391)
T ss_pred ceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCC---h
Confidence 111 1 1223356667788777777653 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------HHHHHHHHHhCCeEEeCCC-----
Q psy16707 329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------ATQVEKLIKEHSVYLTKDG----- 396 (420)
Q Consensus 329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------~~~v~~Ll~e~~Vy~~p~g----- 396 (420)
.| ...++.+++++|+.+.+.|++.| +.+..+++|+|.|+.++ .+.+++|++++||.+.|+.
T Consensus 287 ~~---~~~~~~~~~~~~~~~~~~l~~~~----~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~ 359 (391)
T PRK07309 287 DD---ALPMKKEYIKRRDYIIEKMTDLG----FKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPY 359 (391)
T ss_pred hH---HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCC
Confidence 22 24566889999999999999876 56677888999986433 3456788889999998852
Q ss_pred -----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 397 -----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 -----Ris~agl~~~ni~~la~AI~~vv 419 (420)
||+++. +.++++...++|.+++
T Consensus 360 ~~~~iRi~~~~-~~~~l~~~i~~l~~~~ 386 (391)
T PRK07309 360 GEGYVRLSYAA-SMETIKEAMKRLKEYM 386 (391)
T ss_pred CCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 999985 5556666666665543
No 36
>PRK09082 methionine aminotransferase; Validated
Probab=99.76 E-value=1.3e-16 Score=162.62 Aligned_cols=239 Identities=15% Similarity=0.101 Sum_probs=165.6
Q ss_pred CcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707 130 LPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209 (420)
Q Consensus 130 ~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr 209 (420)
+|.-++++ ...+....+..+.+.++ ..++|||++|. ++. +.++.+.++.....++ ....|.|..|.++||
T Consensus 4 ~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~i~l~~g~---~~~--~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr 73 (386)
T PRK09082 4 NPLIPQSK-LPNVGTTIFTVMSALAA---EHGAINLSQGF---PDF--DGPPYLVEALAYAMAA-GHNQYPPMTGVAALR 73 (386)
T ss_pred CchhhhhH-hhccCccHHHHHHHHHh---hCCEEEecCCC---CCC--CCCHHHHHHHHHHHHc-CCCCCCCCCCcHHHH
Confidence 45445555 55555444444443332 24689999996 443 4466777777776543 457899999999999
Q ss_pred HHHHHHHcCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 210 KLAAQLAYGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 210 ~a~~~~~~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+++++++....+...+++ .| +.|.||++++.+++..+ +.| ||+|++++|+|++|
T Consensus 74 ~~~a~~l~~~~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~~--~~~-gd~Vli~~p~y~~~ 128 (386)
T PRK09082 74 EAIAAKTARLYGRQYDADSEI----------------------TVTAGATEALFAAILAL--VRP-GDEVIVFDPSYDSY 128 (386)
T ss_pred HHHHHHHHHHhCCCCCCCCcE----------------------EEeCCHHHHHHHHHHHH--cCC-CCEEEEeCCCchhh
Confidence 999998733222112222 33 66999999999988755 457 99999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
...++.+|.+
T Consensus 129 ~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~ 208 (386)
T PRK09082 129 APAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHI 208 (386)
T ss_pred HHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhh
Confidence 9999988765
Q ss_pred --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707 299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA 328 (420)
Q Consensus 299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~ 328 (420)
....+..-.+++...|.+++.+|.+
T Consensus 209 ~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----- 283 (386)
T PRK09082 209 VFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA----- 283 (386)
T ss_pred ccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC-----
Confidence 1122223345677788877777752
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCC------
Q psy16707 329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKD------ 395 (420)
Q Consensus 329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~------ 395 (420)
+.++++.++..|+++|+.+.+.|++.| |+..++++|||.|+.+ +. ++++.|++++||.+.|+
T Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~ 358 (386)
T PRK09082 284 -EPEHYLELPAFYQAKRDRFRAALANSR----FKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYAD 358 (386)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCC
Confidence 123345566899999999999999876 6667788999999643 33 56678889999999885
Q ss_pred ----C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 396 ----G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 396 ----g--Ris~agl~~~ni~~la~AI~~ 417 (420)
+ ||+++. ++ +.+.+++.+
T Consensus 359 ~~~~~~~Ri~~~~-~~---~~l~~~~~r 382 (386)
T PRK09082 359 PFPHRLVRLCFAK-QE---ETLDAAAER 382 (386)
T ss_pred CCCCCEEEEEecC-CH---HHHHHHHHH
Confidence 1 999984 44 444454443
No 37
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.75 E-value=1.7e-16 Score=161.66 Aligned_cols=232 Identities=15% Similarity=0.110 Sum_probs=163.3
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHH-HHHHHHccCCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQ-ADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAY 217 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~-a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~ 217 (420)
++....+.+..+.+..++ .++.|||++|. ++. ++++.+.+ +..... .....|.+..|.++||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~--~~~~i~l~~g~---p~~--~~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~ 80 (384)
T PRK06348 10 YQQMEVNIMAEIATLAKK--FPDIIDLSLGD---PDL--ITDESIINAAFEDAK--KGHTRYTDSGGDVELIEEIIKYYS 80 (384)
T ss_pred HhcCCccHHHHHHHHHHh--cCCcEEcCCCC---CCC--CCCHHHHHHHHHHHh--cCCCCCCCCCCcHHHHHHHHHHHH
Confidence 556667777777766543 35789999995 543 44555544 433332 245789999999999999999985
Q ss_pred CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
...+..+++++| +.|.|++.++.+++..+ +.| ||+|++++|+|++|...++.+|+
T Consensus 81 ~~~~~~~~~~~i----------------------~it~G~~~al~~~~~~~--~~~-gd~vlv~~p~y~~~~~~~~~~g~ 135 (384)
T PRK06348 81 KNYDLSFKRNEI----------------------MATVGACHGMYLALQSI--LDP-GDEVIIHEPYFTPYKDQIEMVGG 135 (384)
T ss_pred HHhCCCCChhhE----------------------EEcCChHHHHHHHHHHh--cCC-CCEEEEeCCCCcchHHHHHHcCC
Confidence 443333456655 56999999999988755 457 99999999999999999988765
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 136 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 215 (384)
T PRK06348 136 KPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVP 215 (384)
T ss_pred EEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccc
Confidence 3
Q ss_pred -----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16707 299 -----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGM 337 (420)
Q Consensus 299 -----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m 337 (420)
....+....+++..+|.++..+|.+. .+.++.+
T Consensus 216 ~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~ 289 (384)
T PRK06348 216 MATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHR------DTIVPLI 289 (384)
T ss_pred hhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCc------HHHHHHH
Confidence 11122233456777888777767532 2345566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCCC----------cEEEc
Q psy16707 338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKDG----------RISMA 401 (420)
Q Consensus 338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~g----------Ris~a 401 (420)
++.++++|+.+.+.|+..+ + +....+++|||.|+.+ ++ ++++.|++++||.+.||. ||+++
T Consensus 290 ~~~~~~r~~~~~~~L~~~~--~-~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~ 366 (384)
T PRK06348 290 KEEFQKRLEYAYKRIESIP--N-LSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT 366 (384)
T ss_pred HHHHHHHHHHHHHHHhcCC--C-ceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec
Confidence 6889999999999998752 2 5556778899999533 33 556788889999999851 99986
Q ss_pred ccCCCCHHHHHHHHHH
Q psy16707 402 GVTSKNVGYLAKAIHA 417 (420)
Q Consensus 402 gl~~~ni~~la~AI~~ 417 (420)
.+. +.+.+++.+
T Consensus 367 -~~~---~~l~~al~~ 378 (384)
T PRK06348 367 -VGI---EVLEEAFNR 378 (384)
T ss_pred -CCH---HHHHHHHHH
Confidence 444 455555443
No 38
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.75 E-value=2.4e-16 Score=161.00 Aligned_cols=220 Identities=18% Similarity=0.189 Sum_probs=156.0
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcccc-CCceeeecccCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLK-DNLISIVQGISGT 238 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~-~~~i~~~~~~~~~ 238 (420)
+++++|+.|. ++ +++++.+.+|............|.+..|.+++|+++++++....+..++ ++.|
T Consensus 27 ~~~~~l~~g~---~~--~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i--------- 92 (389)
T PRK05957 27 PGTISLGQGV---VS--YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAI--------- 92 (389)
T ss_pred CCeEEccCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeE---------
Confidence 5789999997 33 4567788888877654444568999999999999999988433221122 3334
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|++.++..++..+ +.| ||+|++++|+|++|...++..|++
T Consensus 93 -------------~~t~G~~~~l~~~~~~~--~~~-gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 156 (389)
T PRK05957 93 -------------VVTAGSNMAFMNAILAI--TDP-GDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQA 156 (389)
T ss_pred -------------EEeCChHHHHHHHHHHh--cCC-CCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHh
Confidence 67999999998887654 457 999999999999999988888875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 157 i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 236 (389)
T PRK05957 157 ITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYG 236 (389)
T ss_pred cCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhcc
Confidence
Q ss_pred -------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707 299 -------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK 359 (420)
Q Consensus 299 -------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~ 359 (420)
.........++|.+.|.++..+|+++ ..|. ++.+++|+++|+.+.+.|++.+ +
T Consensus 237 ~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~---~~~~~~~~~~r~~l~~~L~~~~--~ 308 (389)
T PRK05957 237 FASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVG---KSYC---QQHLPEIAQVRQILLKSLGQLQ--D 308 (389)
T ss_pred CccceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCC---hHHH---HHHHHHHHHHHHHHHHHHHhcC--C
Confidence 11112233466778898888877653 1332 3334668999999999998763 2
Q ss_pred CCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 360 PWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 360 ~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~ 417 (420)
-|...+++.|||.|+.+ ++ ++++.|++++||++.|| + |||++..+.+.++.-.+.|.+
T Consensus 309 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~ 381 (389)
T PRK05957 309 RCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQ 381 (389)
T ss_pred CccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence 23445667789998643 33 67788888999999985 1 999987776554444444433
No 39
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.75 E-value=3.9e-16 Score=159.64 Aligned_cols=242 Identities=18% Similarity=0.223 Sum_probs=164.1
Q ss_pred ccchhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707 132 IRFQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209 (420)
Q Consensus 132 ~~~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr 209 (420)
++++++ +..+.++....+.+.... ..+.++|||++|. |++ +++...++.+...+. +...+.|.+..|.++||
T Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~---p~~-~~p~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr 79 (394)
T PRK05942 6 ITPADR-LQALPPYVFARLDELKARAREQGLDLIDLGMGN---PDG-AAPQPVIEAAIAALA-DPQNHGYPPFEGTASFR 79 (394)
T ss_pred cchhhh-hccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCC---CCC-CCCHHHHHHHHHHHh-CCCCccCCCCCCCHHHH
Confidence 344544 555555544444443321 1346789999994 666 233334444444443 23457899999999999
Q ss_pred HHHHHHHcCCCCccccCCc-eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 210 KLAAQLAYGEDCPQLKDNL-ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 210 ~a~~~~~~g~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+++++++....+..++++. | +.|.|++.++.+++..+ +.| ||+|++++|+|++|
T Consensus 80 ~aia~~~~~~~~~~~~~~~~i----------------------~vt~G~~~al~~~~~~~--~~~-gd~Vlv~~P~y~~~ 134 (394)
T PRK05942 80 QAITDWYHRRYGVELDPDSEA----------------------LPLLGSKEGLTHLALAY--VNP-GDVVLVPSPAYPAH 134 (394)
T ss_pred HHHHHHHHHHHCCCcCCCCeE----------------------EEccChHHHHHHHHHHh--CCC-CCEEEEcCCCCcch
Confidence 9999998533222233432 3 56999999999988655 557 99999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
...++..|++
T Consensus 135 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~ 214 (394)
T PRK05942 135 FRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAE 214 (394)
T ss_pred HHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchh
Confidence 9888877764
Q ss_pred ------------------------------------------------hhh--hhh-ccCCCchHHHHHHHHHhCChhhH
Q psy16707 299 ------------------------------------------------KIL--IRA-FYSSPPIHGARIVQEILGDPKLK 327 (420)
Q Consensus 299 ------------------------------------------------~~~--~r~-~~s~pp~~ga~iv~~IL~dp~L~ 327 (420)
..+ .+. .-.+++...|.++..+|..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---- 290 (394)
T PRK05942 215 LAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQL---- 290 (394)
T ss_pred hccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC----
Confidence 111 111 1123455666666666642
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC------C
Q psy16707 328 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD------G 396 (420)
Q Consensus 328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~------g 396 (420)
+.+.++.++++++++|+.+.+.|++.| +....+++|+|.|+.++ .+++.++++++||.+.|+ +
T Consensus 291 --~~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~ 364 (394)
T PRK05942 291 --PDSYLQQVQERYRTRRDFLIQGLGELG----WNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGG 364 (394)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCC
Confidence 234456677999999999999999876 56667788999987543 345677889999999884 1
Q ss_pred ----cEEEcccCCCCHHHHHHHHHHH
Q psy16707 397 ----RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 397 ----Ris~agl~~~ni~~la~AI~~v 418 (420)
||+++ ...+.+.+++.+.
T Consensus 365 ~~~iRis~~----~~~~~l~~~l~~l 386 (394)
T PRK05942 365 EGYVRISLI----ADCDRLGEALDRL 386 (394)
T ss_pred CCeEEEEec----CCHHHHHHHHHHH
Confidence 99996 3568888888764
No 40
>PRK08912 hypothetical protein; Provisional
Probab=99.75 E-value=2.9e-16 Score=159.92 Aligned_cols=234 Identities=18% Similarity=0.286 Sum_probs=155.1
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+..+...++..+.+... .+++|||+.|. |+. ++++..++.+.+.+. + ....|.|+.|.++||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~---p~~-~~p~~~~~~~~~~~~-~-~~~~Y~~~~G~~~lr~~ia~~~~~ 78 (387)
T PRK08912 8 FADLPTTIFEVMSQLAR---EHGAINLGQGF---PDD-PGPEDVRRAAADALL-D-GSNQYPPMMGLPELRQAVAAHYAR 78 (387)
T ss_pred HhhCCCCHHHHHHHHHh---hCCeEEccCCC---CCC-CCCHHHHHHHHHHHh-c-CCCCCCCCCCcHHHHHHHHHHHHH
Confidence 44445555544444442 25789999997 554 233344444433332 2 357899999999999999998843
Q ss_pred CCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 219 EDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 219 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
..+..++++ +| +.|.|+++++.+++..+ +.| ||+|++++|+|++|..+++..|+
T Consensus 79 ~~g~~~~~~~~i----------------------~~t~G~~~al~~~~~~~--~~~-gd~Vlv~~p~y~~~~~~~~~~g~ 133 (387)
T PRK08912 79 FQGLDLDPETEV----------------------MVTSGATEALAAALLAL--VEP-GDEVVLFQPLYDAYLPLIRRAGG 133 (387)
T ss_pred HhCCCCCCcccE----------------------EEeCCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhhHHHHHHcCC
Confidence 222223333 34 67999999998887655 457 99999999999999999998887
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 213 (387)
T PRK08912 134 VPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIP 213 (387)
T ss_pred EEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcC
Confidence 4
Q ss_pred --------------------------------------hhh--hhh--ccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q psy16707 299 --------------------------------------KIL--IRA--FYSSPPIHGARIVQEILGDPKLKAQWLTEVKG 336 (420)
Q Consensus 299 --------------------------------------~~~--~r~--~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~ 336 (420)
..+ .+. .++.++ ..+.++...|... .+| ++.
T Consensus 214 ~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~~~~-~~q~~~~~~l~~~---~~~---~~~ 286 (387)
T PRK08912 214 LMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPP-NLQAAVAYGLGKP---DDY---FEG 286 (387)
T ss_pred hhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhccccCCh-HHHHHHHHHHhCC---HHH---HHH
Confidence 011 111 133333 3344444434211 233 456
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------H-HHHHHHHHhCCeEEeCC----------C--
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------A-TQVEKLIKEHSVYLTKD----------G-- 396 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------~-~~v~~Ll~e~~Vy~~p~----------g-- 396 (420)
++++++++|+.+.+.|++.| |....+++|+|.|+.++ + ++++.|++++||++.|+ +
T Consensus 287 ~~~~~~~~~~~l~~~L~~~g----~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~i 362 (387)
T PRK08912 287 MRADLARSRDRLAAGLRRIG----FPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVV 362 (387)
T ss_pred HHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEE
Confidence 67999999999999999887 66677788999996542 3 46678888999999984 1
Q ss_pred cEEEcccCCCCHHHHHHHHHHH
Q psy16707 397 RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 397 Ris~agl~~~ni~~la~AI~~v 418 (420)
||+++. +.+.++...+.|.++
T Consensus 363 Rl~~~~-~~~~l~~~l~rl~~~ 383 (387)
T PRK08912 363 RFCFAK-RDATLDEAVERLAAA 383 (387)
T ss_pred EEEEeC-CHHHHHHHHHHHHHH
Confidence 999995 455555545555444
No 41
>PLN02231 alanine transaminase
Probab=99.75 E-value=5.7e-16 Score=165.41 Aligned_cols=267 Identities=12% Similarity=0.157 Sum_probs=182.6
Q ss_pred CHHHHHHHHHhhC-CCc--ccchhhhcccc------CCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHH
Q psy16707 116 NVGYLAKAIHANG-SLP--IRFQDARTSSV------KVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQA 186 (420)
Q Consensus 116 ni~~va~ai~~v~-~~p--~~~~~~~~~~~------~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a 186 (420)
+|...|+.|.+-+ +.| .+|.+-...++ ...|+.-+.+....-..++.||++.|. . ..+..++++|
T Consensus 76 ~~~~~a~~~~~~~~~~~~~~pf~~~~~~nig~p~~~~~~~~~~~r~v~~~~~~p~~i~~~~~~-----~-~fp~~~i~~a 149 (534)
T PLN02231 76 EIVTIAQRLQEELKTNPGSYPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSLLDKSETH-----G-LFSADAIERA 149 (534)
T ss_pred hHHHHHHHHHHHHhcCCCcCChhhhhhhccCCHHHcCCCccHHHHHHHHhccCCccCCCCCcc-----c-cCCHHHHHHH
Confidence 4555666666643 222 35555523233 223444444555545667999998664 3 3344888888
Q ss_pred HHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHH
Q psy16707 187 DEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVG 264 (420)
Q Consensus 187 ~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~ 264 (420)
.+.+... .....|.+..|.++||+++++++...++..++++.| +.|.|+++++.++
T Consensus 150 ~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I----------------------~iT~Ga~~ai~~~ 207 (534)
T PLN02231 150 WQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDI----------------------FLTDGASPAVHMM 207 (534)
T ss_pred HHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccE----------------------EEeCCHHHHHHHH
Confidence 8766532 135679999999999999999997665544566666 6799999999999
Q ss_pred HHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------------------------------------
Q psy16707 265 AAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------------------------------- 298 (420)
Q Consensus 265 ~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------------------------------- 298 (420)
+.+|.. .| ||.|++|+|+|+.|...++..|++
T Consensus 208 ~~~l~~-~~-gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG 285 (534)
T PLN02231 208 MQLLIR-SE-KDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTG 285 (534)
T ss_pred HHHhcc-CC-CCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCC
Confidence 886631 35 899999999999999998887764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 286 ~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~ 365 (534)
T PLN02231 286 QVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 365 (534)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEE
Confidence
Q ss_pred -----------hhhhhhccCCCchHHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCc
Q psy16707 299 -----------KILIRAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWN 362 (420)
Q Consensus 299 -----------~~~~r~~~s~pp~~ga~iv~~IL~dp----~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~ 362 (420)
.........|++..+|.++..++++| .-..+|.++++.+++.|+++|+.+.+.|+++ | |.
T Consensus 366 ~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~g----i~ 441 (534)
T PLN02231 366 VTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEG----VT 441 (534)
T ss_pred EecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----ce
Confidence 00001112244556676666667654 1334666788888899999999999999986 3 67
Q ss_pred ccCCCCceEEe--cCCCH---------------HHHHHHHHhCCeEEeCC-------C----cEEEcccCCCCHHHHHHH
Q psy16707 363 HITDQIGMFCY--TGLNA---------------TQVEKLIKEHSVYLTKD-------G----RISMAGVTSKNVGYLAKA 414 (420)
Q Consensus 363 ~i~~q~GmF~~--~~l~~---------------~~v~~Ll~e~~Vy~~p~-------g----Ris~agl~~~ni~~la~A 414 (420)
+..+++|||.| +.++. .++++|++++||.++|| | |++++ .+.+.++...+.
T Consensus 442 ~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~~~e~l~eal~R 520 (534)
T PLN02231 442 CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVSR 520 (534)
T ss_pred ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-CCHHHHHHHHHH
Confidence 77889999999 44332 24577899999999995 1 88885 455565554444
Q ss_pred HHH
Q psy16707 415 IHA 417 (420)
Q Consensus 415 I~~ 417 (420)
|.+
T Consensus 521 L~~ 523 (534)
T PLN02231 521 LTE 523 (534)
T ss_pred HHH
Confidence 443
No 42
>PLN02187 rooty/superroot1
Probab=99.74 E-value=2.5e-16 Score=165.25 Aligned_cols=227 Identities=17% Similarity=0.113 Sum_probs=162.0
Q ss_pred HHccCCCCceeecccccccCCC--CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707 154 FKKDTNVNKINLGVGAYRDDQG--KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISI 231 (420)
Q Consensus 154 ~~~d~~~~kInL~iG~y~d~dg--~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~ 231 (420)
...+...++|+|++| |++. .+.+++.+.++...+..+.....|.|..|.++||+++++++....+..+++++|
T Consensus 60 ~~~~~~~~vi~l~~G---dp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I-- 134 (462)
T PLN02187 60 CGKDVNKTILPLGHG---DPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDI-- 134 (462)
T ss_pred cccCCCCCeEECCCC---CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccE--
Confidence 344456889999999 4663 244556666666665544445789999999999999999985433333556666
Q ss_pred ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------
Q psy16707 232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------- 298 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------- 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 135 --------------------~it~G~~~al~~~~~~l--~~p-Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~ 191 (462)
T PLN02187 135 --------------------FLTAGCNQGIEIVFESL--ARP-NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWE 191 (462)
T ss_pred --------------------EEeCCHHHHHHHHHHHh--cCC-CCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCc
Confidence 56999999999998866 458 999999999999999888888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 192 ~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l 271 (462)
T PLN02187 192 IDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTL 271 (462)
T ss_pred cCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEE
Confidence
Q ss_pred ---------------------hh-------h---hhhc--c-CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q psy16707 299 ---------------------KI-------L---IRAF--Y-SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISM 344 (420)
Q Consensus 299 ---------------------~~-------~---~r~~--~-s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~ 344 (420)
.. . .+.. + ++++...|.++..+|.+. ..+.++.+++.++++
T Consensus 272 ~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~-----~~~~l~~~~~~l~~~ 346 (462)
T PLN02187 272 AGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA-----DKNFFAKKNKILKHN 346 (462)
T ss_pred ecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHH
Confidence 00 0 1111 2 244677888887777541 124455666899999
Q ss_pred HHHHHHHHHhcCCCCCCcc--cCCCCceEEecCC---------CH-HHHHHHHHhCCeEEeCCC--------cEEEcccC
Q psy16707 345 RQSLKDNLQKEGSNKPWNH--ITDQIGMFCYTGL---------NA-TQVEKLIKEHSVYLTKDG--------RISMAGVT 404 (420)
Q Consensus 345 R~~l~~~L~~~g~~~~w~~--i~~q~GmF~~~~l---------~~-~~v~~Ll~e~~Vy~~p~g--------Ris~agl~ 404 (420)
|+.+.+.|++.+ +.. ..+++|+|.|+.+ ++ +++.+|+++.||.+.||. |||++ ..
T Consensus 347 r~~l~~~L~~~~----~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~-~~ 421 (462)
T PLN02187 347 VDLVCDRLKDIP----CVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIG-VE 421 (462)
T ss_pred HHHHHHHHhhCC----CCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeC-CC
Confidence 999999999864 222 2467789998743 23 667888899999999962 99998 45
Q ss_pred CCCHHHHHHHHHHH
Q psy16707 405 SKNVGYLAKAIHAV 418 (420)
Q Consensus 405 ~~ni~~la~AI~~v 418 (420)
.++++.-.+.|.++
T Consensus 422 ~e~l~~al~rL~~~ 435 (462)
T PLN02187 422 AHMLEDALERLKGF 435 (462)
T ss_pred HHHHHHHHHHHHHH
Confidence 66655555555544
No 43
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.74 E-value=2.2e-16 Score=161.08 Aligned_cols=243 Identities=15% Similarity=0.158 Sum_probs=169.4
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAA 213 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~ 213 (420)
|+.+ ...+....+..+.+.... .++.|||++|. ++ +++++.++++...+..+ ....|.|..|.++||++++
T Consensus 10 ~~~~-~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia 80 (391)
T PRK08361 10 IAGR-INLIQRSKIRELFERASK--MENVISLGIGE---PD--FDTPKNIKEAAKRALDE-GWTHYTPNAGIPELREAIA 80 (391)
T ss_pred hhHH-HHhCCccHHHHHHHHHHh--hcCeEEcCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHH
Confidence 3444 445555566666555422 25789999996 44 34468888887776643 4567999999999999999
Q ss_pred HHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707 214 QLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK 293 (420)
Q Consensus 214 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~ 293 (420)
+++....+..+++++| +.|.|+++++.+++..+ +.| ||.|++++|+|++|...++
T Consensus 81 ~~~~~~~g~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-g~~Vlv~~p~y~~~~~~~~ 135 (391)
T PRK08361 81 EYYKKFYGVDVDVDNV----------------------IVTAGAYEATYLAFESL--LEE-GDEVIIPDPAFVCYVEDAK 135 (391)
T ss_pred HHHHHHhCCCCCcccE----------------------EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCCCcccHHHHH
Confidence 9983221112445555 66999999999988755 457 9999999999999999988
Q ss_pred hcCcc---------------------------------------------------------------------------
Q psy16707 294 HTGLE--------------------------------------------------------------------------- 298 (420)
Q Consensus 294 ~aG~~--------------------------------------------------------------------------- 298 (420)
..|++
T Consensus 136 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~ 215 (391)
T PRK08361 136 IAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEG 215 (391)
T ss_pred HcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCC
Confidence 87764
Q ss_pred -----------------------------------------h---hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 299 -----------------------------------------K---ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 299 -----------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
. ........+++...|.++..+|.++. .| +.+
T Consensus 216 ~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~-~~~ 291 (391)
T PRK08361 216 AKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKE---SW-KAV 291 (391)
T ss_pred CCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCc---cc-HHH
Confidence 1 11112234556667777777776642 22 567
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC--------C--cE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD--------G--RI 398 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~--------g--Ri 398 (420)
+.++.+++++|+.+.+.|++.+ + +....+++|+|.|..+ +. ++++.|++++||.+.|+ + ||
T Consensus 292 ~~~~~~~~~~~~~~~~~L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi 368 (391)
T PRK08361 292 EEMRKEYNERRKLVLKRLKEMP--H-IKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRI 368 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--C-CeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEE
Confidence 7888999999999999998862 1 5567778899998633 33 55577878899999884 1 99
Q ss_pred EEcccCCCCHHHHHHHHHHH
Q psy16707 399 SMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 399 s~agl~~~ni~~la~AI~~v 418 (420)
+++. +++.++...+.|.++
T Consensus 369 ~~~~-~~~~l~~al~~l~~~ 387 (391)
T PRK08361 369 SYAT-SKEKLIEAMERMEKA 387 (391)
T ss_pred EecC-CHHHHHHHHHHHHHH
Confidence 9984 555555555555544
No 44
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.74 E-value=2.7e-16 Score=159.99 Aligned_cols=244 Identities=18% Similarity=0.221 Sum_probs=177.1
Q ss_pred cchhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707 133 RFQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK 210 (420)
Q Consensus 133 ~~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~ 210 (420)
.||++ +..+.++++..+.+.+++ ...++.|||++|. ++ +++++.++++......+ ....|.|..|.++||+
T Consensus 3 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~ 75 (393)
T PRK05764 3 KLSKR-VSRVTPSATLAVTAKAKELKAQGRDVISLGAGE---PD--FDTPEHIKEAAIEALDD-GKTKYTPAAGIPELRE 75 (393)
T ss_pred chhhh-hhhcCchHHHHHHHHHHHHHhccCCEEEeCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCcCCCCChHHHHH
Confidence 36666 778888887766555542 1246789999996 44 35567888887776643 3456999999999999
Q ss_pred HHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 211 LAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 211 a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
++++++...++..+++++| +.|.|+++++..++..+ +.+ ||.|++++|+|+.|..
T Consensus 76 ~ia~~~~~~~~~~~~~~~i----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~y~~~~~ 130 (393)
T PRK05764 76 AIAAKLKRDNGLDYDPSQV----------------------IVTTGAKQALYNAFMAL--LDP-GDEVIIPAPYWVSYPE 130 (393)
T ss_pred HHHHHHHHHhCCCCCHHHE----------------------EEeCCcHHHHHHHHHHh--cCC-CCEEEecCCCCcchHH
Confidence 9999984433222445555 66999999999887644 457 8999999999999999
Q ss_pred HHhhcCcc------------------------------------------------------------------------
Q psy16707 291 ICKHTGLE------------------------------------------------------------------------ 298 (420)
Q Consensus 291 i~~~aG~~------------------------------------------------------------------------ 298 (420)
+++..|.+
T Consensus 131 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~ 210 (393)
T PRK05764 131 MVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLV 210 (393)
T ss_pred HHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccccee
Confidence 98887764
Q ss_pred --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707 299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA 328 (420)
Q Consensus 299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~ 328 (420)
....+....+++...+.++..+|++. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~ 287 (393)
T PRK05764 211 YDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGP---Q 287 (393)
T ss_pred eCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCC---h
Confidence 11122334566667777777667521 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC-
Q psy16707 329 QWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG- 396 (420)
Q Consensus 329 ~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g- 396 (420)
+.++.++.+++++|+.+.+.|+++ | +....+++|+|.|..++ .++++.|++++||.+.|+.
T Consensus 288 ---~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 360 (393)
T PRK05764 288 ---DEVEEMRQAFEERRDLMVDGLNEIPG----LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIA 360 (393)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhCCC----CcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccc
Confidence 345556688999999999999987 5 56667788899885432 3556788889999998852
Q ss_pred -------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 397 -------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 -------Ris~agl~~~ni~~la~AI~~vv 419 (420)
|||++. +.+.++...++|.+++
T Consensus 361 f~~~~~vRis~~~-~~~~~~~~i~~l~~~~ 389 (393)
T PRK05764 361 FGAPGYVRLSYAT-SLEDLEEGLERIERFL 389 (393)
T ss_pred cCCCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 999985 7788888788777765
No 45
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.74 E-value=9.9e-18 Score=167.88 Aligned_cols=222 Identities=19% Similarity=0.217 Sum_probs=165.3
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHH-HHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCC-ceeeecccCCC
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEI-VLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDN-LISIVQGISGT 238 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~-~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~-~i~~~~~~~~~ 238 (420)
++|||+.|.+.+..+. ++++.+.++... .......+.|+|..|.++||+++++++...++..++++ .|
T Consensus 2 ~~I~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i--------- 71 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQN-PPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANI--------- 71 (363)
T ss_dssp TEEESSSSSTSSTTSS-HHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGE---------
T ss_pred CEEEEECCCCCCcccc-cchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEE---------
Confidence 6899999998777676 445544444433 32335789999999999999999999973333333333 23
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.+.|...++..+..++. ..+ ||+|++++|+|++|..+++..|++
T Consensus 72 -------------~~~~G~~~~~~~~~~~~~-~~~-~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 136 (363)
T PF00155_consen 72 -------------LVTSGAQAALFLLLRLLK-INP-GDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALE 136 (363)
T ss_dssp -------------EEESHHHHHHHHHHHHHH-SST-TSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHH
T ss_pred -------------EEecccccchhhhhhccc-ccc-cccceecCCccccccccccccCceeeeccccccccccccccccc
Confidence 445555566666555442 446 899999999999999999999886
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 137 ~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~ 216 (363)
T PF00155_consen 137 EALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVV 216 (363)
T ss_dssp HHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEE
T ss_pred cccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceee
Confidence
Q ss_pred --------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 --------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL 352 (420)
Q Consensus 299 --------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L 352 (420)
.......+.. +.+.+.++..+|.++... .++++.++++++++|+.+.+.|
T Consensus 217 ~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L 292 (363)
T PF00155_consen 217 GSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSGLS-SSPMQAAAAAALSDPELV---EKWLEELRERLRENRDLLREAL 292 (363)
T ss_dssp EESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccccccccccccccchhhhhhhhhhccccccc-cchhhHHHHHhhhccccc---ccccccchhhHHHHHHHHHHHH
Confidence 1111223333 778888888888765332 3466777799999999999999
Q ss_pred HhcCCCCCCcccCCCCceEEecCCCH----HHHHHHHHhCCeEEeCC--------CcEEEcccCCCCHHHHHHHH
Q psy16707 353 QKEGSNKPWNHITDQIGMFCYTGLNA----TQVEKLIKEHSVYLTKD--------GRISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 353 ~~~g~~~~w~~i~~q~GmF~~~~l~~----~~v~~Ll~e~~Vy~~p~--------gRis~agl~~~ni~~la~AI 415 (420)
++.| |....++.|+|.|..++. ++.++|++++||++.|+ .||++|..+.++++.++++|
T Consensus 293 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 293 EEIG----ITVLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp HHTT----SEEEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred HHhh----hheeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 9987 788888899999987663 56789998889999994 39999889999999998876
No 46
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.74 E-value=3.2e-16 Score=161.41 Aligned_cols=225 Identities=16% Similarity=0.164 Sum_probs=162.9
Q ss_pred cCCCCceeecccccccCCC--CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC------CccccCCc
Q psy16707 157 DTNVNKINLGVGAYRDDQG--KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED------CPQLKDNL 228 (420)
Q Consensus 157 d~~~~kInL~iG~y~d~dg--~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~------~~~~~~~~ 228 (420)
..++++|||++|. |+. +..+++.++++.....+......|.+..|.++||+++++++.... +..+++++
T Consensus 30 ~~~~~~i~l~~g~---p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~ 106 (412)
T PTZ00433 30 PSPKSIIKLSVGD---PTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDN 106 (412)
T ss_pred CCCCCeeecCCcC---CCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhh
Confidence 4678999999996 553 356788888888776554345789999999999999999985321 12244454
Q ss_pred eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------
Q psy16707 229 ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------- 298 (420)
Q Consensus 229 i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------- 298 (420)
| +.|.|+++++.+++..+ +.| ||+|++++|+|+.|...++..|++
T Consensus 107 i----------------------~it~G~~~al~~~~~~~--~~~-gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~ 161 (412)
T PTZ00433 107 V----------------------VLCSGVSHAILMALTAL--CDE-GDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEK 161 (412)
T ss_pred E----------------------EEeCChHHHHHHHHHHh--cCC-CCEEEEccCCcccHHHHHHHcCCEEEEEecCccc
Confidence 4 67999999999998766 457 999999999999999999888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 162 ~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 241 (412)
T PTZ00433 162 DWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPR 241 (412)
T ss_pred cCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCce
Confidence
Q ss_pred --------------------h---------hhh------hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q psy16707 299 --------------------K---------ILI------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIIS 343 (420)
Q Consensus 299 --------------------~---------~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~ 343 (420)
. .++ +....+++...|.++..+|.+. +...++++++++++
T Consensus 242 i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-----~~~~~~~~~~~~~~ 316 (412)
T PTZ00433 242 VILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT-----PQEHLEQIVAKLEE 316 (412)
T ss_pred EEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC-----cHHHHHHHHHHHHH
Confidence 1 111 1223355667777776666531 22445566689999
Q ss_pred HHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC--------cEEEcccCC
Q psy16707 344 MRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG--------RISMAGVTS 405 (420)
Q Consensus 344 ~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~ 405 (420)
+|+.+.+.|++... +.+..+++|+|.|+.++ .++++.|++++||.+.|+. ||+++. .+
T Consensus 317 ~r~~l~~~L~~~~~---~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~ 392 (412)
T PTZ00433 317 GAMVLYNHIGECIG---LSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PV 392 (412)
T ss_pred HHHHHHHHHhcCCC---CcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CH
Confidence 99999999987521 56677889999996442 3677889888999999962 999974 45
Q ss_pred CCHHHHHHHHHHH
Q psy16707 406 KNVGYLAKAIHAV 418 (420)
Q Consensus 406 ~ni~~la~AI~~v 418 (420)
++++...+.|.++
T Consensus 393 e~l~~al~~l~~~ 405 (412)
T PTZ00433 393 EVLREAVERIKAF 405 (412)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555555443
No 47
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.73 E-value=1.8e-16 Score=164.00 Aligned_cols=216 Identities=15% Similarity=0.105 Sum_probs=167.3
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
...++|+.|. ++. +++|.+.++...+.. ....|.+..|.++||+++++++-.... .+++|
T Consensus 85 ~~~i~L~~g~---p~~--~~~p~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~I---------- 144 (431)
T PRK15481 85 TPLHDLAGGN---PDP--QRLPDLSRYFARLSR--TPRLYGDAPVSPELHAWAARWLRDDCP---VAFEI---------- 144 (431)
T ss_pred chhhhhhcCC---CCh--hHhHHHHHHHHHhhh--hhhhcCCcCCCHHHHHHHHHHHhhccC---CcCeE----------
Confidence 4578999995 444 556667777666543 345799999999999999998632211 12334
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||+|++++|+|+.|...++.+|++
T Consensus 145 ------------iit~G~~~al~~~~~~l--~~p-gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~ 209 (431)
T PRK15481 145 ------------DLTSGAIDAIERLLCAH--LLP-GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALA 209 (431)
T ss_pred ------------EEecCcHHHHHHHHHHh--CCC-CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHh
Confidence 67999999999998755 458 999999999999999999999885
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 210 ~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlR 289 (431)
T PRK15481 210 QGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLR 289 (431)
T ss_pred cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCce
Confidence
Q ss_pred -----------hhhh--hh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy16707 299 -----------KILI--RA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI 364 (420)
Q Consensus 299 -----------~~~~--r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i 364 (420)
..+. +. ...+++...|.++..+|++ ++|.+.++.+++.|+++|+.+.+.|++.| |.+.
T Consensus 290 iG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~----~~~~~~l~~~~~~~~~~r~~~~~~L~~~~----~~~~ 361 (431)
T PRK15481 290 LAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTD----PEYQARLAQARLFYAQRRQKLARALQQYG----IAIP 361 (431)
T ss_pred eEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhC----ccHHHHHHHHHHHHHHHHHHHHHHHHHcC----Cccc
Confidence 1111 12 2234678889989888876 45667788888999999999999999886 5666
Q ss_pred CCCCceEEecCCC---HHHHHHHHHhCCeEEeCC-----------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 365 TDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD-----------GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 365 ~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~-----------gRis~agl~~~ni~~la~AI~~vv 419 (420)
.+++|||.|+.++ .++++.| .++||.+.|| -|||++.+++++++...+.|++++
T Consensus 362 ~p~gg~f~~~~l~~~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 362 SPGDGLNLWLPLDTDSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQAL 429 (431)
T ss_pred cCCCeEEEEEECCCCHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence 7899999998774 3455666 5799999884 199999999999999999999875
No 48
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.1e-15 Score=158.05 Aligned_cols=219 Identities=16% Similarity=0.118 Sum_probs=158.9
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcc-ccCC-ceeeecccC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQ-LKDN-LISIVQGIS 236 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~-~~~~-~i~~~~~~~ 236 (420)
..++|||++|. ++ +.+++.+.++............|.+ .|.++||+++++++...++.. ++++ .|
T Consensus 43 ~~~~i~L~~g~---p~--~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I------- 109 (410)
T PRK06290 43 DMELIDMGVGE---PD--EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEV------- 109 (410)
T ss_pred CCCeEEcCCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceE-------
Confidence 45689999997 43 3456677777665443334567875 899999999999984433222 3443 45
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.|+++++.+++..+ +.| ||+|++|+|+|+.|...++..|++
T Consensus 110 ---------------~it~Gs~~al~~~~~~~--~~~-gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~ 171 (410)
T PRK06290 110 ---------------IHSIGSKPALAMLPSCF--INP-GDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDS 171 (410)
T ss_pred ---------------EEccCHHHHHHHHHHHh--CCC-CCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHH
Confidence 66999999999988755 457 999999999999999999888774
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 172 l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK 251 (410)
T PRK06290 172 IPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSK 251 (410)
T ss_pred HHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechh
Confidence
Q ss_pred ---------------------hhhhhh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy16707 299 ---------------------KILIRA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEG 356 (420)
Q Consensus 299 ---------------------~~~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g 356 (420)
....+. ...+++...|.++..+|.++ +|. +.++.+++++|+.+.+.|++.|
T Consensus 252 ~~g~~GlRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~----~~~---~~~~~~~~~~~~~l~~~L~~~g 324 (410)
T PRK06290 252 AYNMTGWRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHP----EIT---EKIREKYSRRLDKLVKILNEVG 324 (410)
T ss_pred hcCCchhheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCc----HHH---HHHHHHHHHHHHHHHHHHHhCC
Confidence 111122 22344456777777777663 453 4556899999999999999887
Q ss_pred CCCCCcccCCCCceEEecCCC------------HHHHHHHHHhCCeEEeCC------CcEEEccc--CCCCHHHHHHHHH
Q psy16707 357 SNKPWNHITDQIGMFCYTGLN------------ATQVEKLIKEHSVYLTKD------GRISMAGV--TSKNVGYLAKAIH 416 (420)
Q Consensus 357 ~~~~w~~i~~q~GmF~~~~l~------------~~~v~~Ll~e~~Vy~~p~------gRis~agl--~~~ni~~la~AI~ 416 (420)
|....+++|||.|+.++ .+++++|+++.+|.+.|+ -||++|+. +.++-+++.+++.
T Consensus 325 ----~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~ 400 (410)
T PRK06290 325 ----FKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIK 400 (410)
T ss_pred ----CeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHH
Confidence 66677889999986543 356789988888888885 29999863 6677788888887
Q ss_pred HHh
Q psy16707 417 AVT 419 (420)
Q Consensus 417 ~vv 419 (420)
+++
T Consensus 401 ~~~ 403 (410)
T PRK06290 401 RRL 403 (410)
T ss_pred HHH
Confidence 764
No 49
>PRK08175 aminotransferase; Validated
Probab=99.72 E-value=9.8e-16 Score=156.72 Aligned_cols=219 Identities=15% Similarity=0.181 Sum_probs=149.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCC-ceeeecccCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDN-LISIVQGISG 237 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~-~i~~~~~~~~ 237 (420)
.+++|||+.|. +++. +++.+.++......+.....|.|..|+++||+++++++...++..++++ +|
T Consensus 28 ~~~~i~l~~g~---p~~~--~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i-------- 94 (395)
T PRK08175 28 GEDIIDFSMGN---PDGP--TPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEA-------- 94 (395)
T ss_pred CCCeEEcCCCC---CCCC--CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcE--------
Confidence 47899999995 7664 3454444444333333568899999999999999999854332223333 34
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
+.|.|++.++.+.+..+ +.| ||+|++++|+|++|...++..|++
T Consensus 95 --------------~~t~G~~~~l~~~~~~~--~~~-gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~ 157 (395)
T PRK08175 95 --------------IVTIGSKEGLAHLMLAT--LDH-GDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERA 157 (395)
T ss_pred --------------EEccCcHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHH
Confidence 66999999999887654 457 999999999999999988888775
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 158 l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK 237 (395)
T PRK08175 158 IRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSK 237 (395)
T ss_pred HhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccc
Confidence
Q ss_pred -------------------hh--hhhh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy16707 299 -------------------KI--LIRA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEG 356 (420)
Q Consensus 299 -------------------~~--~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g 356 (420)
.. ..+. ...+++...+.++...|.+ ..++++.++.+|+++|+.+.+.|++.|
T Consensus 238 ~~g~pGlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~L~~~~ 311 (395)
T PRK08175 238 SYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG------DQQCVRDIAEQYKRRRDVLVKGLHEAG 311 (395)
T ss_pred cccCcchhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC------cHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 00 0111 1112233344444444433 235677788999999999999999886
Q ss_pred CCCCCcccCCCCceEEecCCC--------HHHHHHHHHhCCeEEeCC----------CcEEEcccCCCCHHHHHHHHHHH
Q psy16707 357 SNKPWNHITDQIGMFCYTGLN--------ATQVEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 357 ~~~~w~~i~~q~GmF~~~~l~--------~~~v~~Ll~e~~Vy~~p~----------gRis~agl~~~ni~~la~AI~~v 418 (420)
|....+.+|+|.|+.++ .++++.|++++||.+.|+ -||+++ .+.+.+....+.|.++
T Consensus 312 ----~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~-~~~~~~~~al~~l~~~ 386 (395)
T PRK08175 312 ----WMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI-ENRDRIRQAIRGIKAM 386 (395)
T ss_pred ----CcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC-CCHHHHHHHHHHHHHH
Confidence 65566778999997553 345577888999999986 199987 3444444444444433
No 50
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.72 E-value=7.2e-16 Score=158.52 Aligned_cols=219 Identities=16% Similarity=0.168 Sum_probs=158.7
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG 234 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~ 234 (420)
+++++||++|. ++ .++++.|.++......+ .....|.|..|.++||+++++++....+..+++++|
T Consensus 33 ~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I----- 102 (409)
T PRK07590 33 EAKIIRLGIGD---VT--QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEI----- 102 (409)
T ss_pred CCceEEecCcC---CC--CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhE-----
Confidence 56899999996 43 34567777776665543 145789999999999999999986554444566666
Q ss_pred cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc-------------c---
Q psy16707 235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL-------------E--- 298 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~-------------~--- 298 (420)
+.|.|++.++.+...+ +.| ||+|++++|+|+.|..+++.+|. .
T Consensus 103 -----------------~it~Ga~~al~~l~~~---~~~-gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~ 161 (409)
T PRK07590 103 -----------------FISDGAKCDTGNILDI---FGP-DNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLP 161 (409)
T ss_pred -----------------EECCCHHHHHHHHHHh---cCC-CCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEee
Confidence 5699999999886543 457 99999999999999999988874 1
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 162 ~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~v 241 (409)
T PRK07590 162 CTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECA 241 (409)
T ss_pred cccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccce
Confidence
Q ss_pred -----------------------hhhhh-------------------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q psy16707 299 -----------------------KILIR-------------------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG 336 (420)
Q Consensus 299 -----------------------~~~~r-------------------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~ 336 (420)
..++. ..+.+++...|.++..+|++. ..++++.
T Consensus 242 i~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-----~~~~~~~ 316 (409)
T PRK07590 242 IEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE-----GKAQIKE 316 (409)
T ss_pred EEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC-----cHHHHHH
Confidence 11111 123456777888777777642 1245666
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCCC----------cEEEc
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKDG----------RISMA 401 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~g----------Ris~a 401 (420)
+++.++++|+.+.+.|++.| |....+++|+|.|+.++ .++++.|++++||.+.|+. |||++
T Consensus 317 ~~~~~~~~r~~l~~~L~~~~----~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~ 392 (409)
T PRK07590 317 LIDYYMENAKIIREGLESAG----FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF 392 (409)
T ss_pred HHHHHHHHHHHHHHHHHhcC----CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc
Confidence 77999999999999999876 55556678999997553 3566788889999999851 89875
Q ss_pred ccCCCCHHHHHHHHHHH
Q psy16707 402 GVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 402 gl~~~ni~~la~AI~~v 418 (420)
.+.++++...+.|.++
T Consensus 393 -~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 393 -GSRENVLEAMERIKKA 408 (409)
T ss_pred -CCHHHHHHHHHHHHhh
Confidence 4555666555555543
No 51
>PRK07324 transaminase; Validated
Probab=99.72 E-value=3.5e-16 Score=159.24 Aligned_cols=212 Identities=17% Similarity=0.091 Sum_probs=152.5
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+.++++|++|. ++ +.+++.+ +|...... +....|++..|.++||+++++++.+ +++++|
T Consensus 25 ~~~~~~~~~~e---~~--~~~~~~~-~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~v--------- 83 (373)
T PRK07324 25 ESCIDSLTLEE---LL--ALAGKNP-EAFYQELG-QKKLTYGWIEGSPEFKEAVASLYQN-----VKPENI--------- 83 (373)
T ss_pred cCCCCCCcHHH---HH--hccCcch-HHHHHHHh-cCCccCCCCCCCHHHHHHHHHHhcC-----CChhhE---------
Confidence 57899999997 43 4556666 44444443 3467999999999999999998754 234555
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++|+.+++..+ +.| ||+|++++|+|+.|..+++..|++
T Consensus 84 -------------i~t~G~~~al~~~~~~l--~~~-gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~ 147 (373)
T PRK07324 84 -------------LQTNGATGANFLVLYAL--VEP-GDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELR 147 (373)
T ss_pred -------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHH
Confidence 67999999999988755 557 999999999999999988888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 148 ~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~ 227 (373)
T PRK07324 148 RLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLP 227 (373)
T ss_pred HhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCc
Confidence
Q ss_pred -----------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy16707 299 -----------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPW 361 (420)
Q Consensus 299 -----------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w 361 (420)
.........+++..++.++..+|++ +.+.++.+++.++++|+.+.+.|++.+ .+
T Consensus 228 G~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~------~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~ 298 (373)
T PRK07324 228 GIRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEH------RDAILERNRKIVRTNLAILDEWVAKEP---RV 298 (373)
T ss_pred cceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC------HHHHHHHHHHHHHHHHHHHHHHHhcCC---Cc
Confidence 1111122345566777777666653 345677788999999999999998763 15
Q ss_pred cccCCCCceEEecCC----C-HHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHH
Q psy16707 362 NHITDQIGMFCYTGL----N-ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 362 ~~i~~q~GmF~~~~l----~-~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~ 417 (420)
....++.|+|.|+.+ + .+++++|++++||.+.||. |||++. +.+++..-.+.|.+
T Consensus 299 ~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~ 366 (373)
T PRK07324 299 SYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSE 366 (373)
T ss_pred eEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 556777888776533 3 4678999999999999972 999984 44444443333333
No 52
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.71 E-value=9.6e-16 Score=161.11 Aligned_cols=241 Identities=16% Similarity=0.233 Sum_probs=170.6
Q ss_pred ccCCChHHHHHHHHHccC-----CC-CceeecccccccCCCCCCchHHHHHHHHHHHcc-----------CCCCCCCCCC
Q psy16707 141 SVKVPSSNLLTEAFKKDT-----NV-NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-----------NLDKEYAPII 203 (420)
Q Consensus 141 ~~~~d~i~~l~~~~~~d~-----~~-~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-----------~~~~~Y~p~~ 203 (420)
+..+.+.+.....+..+. ++ ..|||++++ .+...+.+.+..+..... .....|.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~y~~~~~p~g~i~L~~~E------n~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~ 86 (468)
T PLN02450 13 HGQDSSYFLGWEEYEKNPYDEIKNPSGIIQMGLAE------NQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYH 86 (468)
T ss_pred cCCCCchHHHHHHHhcCCCCcccCCCeeEEeehhH------hHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCC
Confidence 444556665445554442 34 689999996 234446666655443110 1223599999
Q ss_pred CCHHHHHHHHHHHcCCCC--ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEc
Q psy16707 204 GAPDFGKLAAQLAYGEDC--PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVP 281 (420)
Q Consensus 204 G~~~fr~a~~~~~~g~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvp 281 (420)
|.++||+++++++....+ ..+++++| +.|.|+++++.+++..+ +.| ||.|++|
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~v~~~~I----------------------iit~Ga~~al~~l~~~l--~~p-Gd~Vlv~ 141 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVTFDPNKL----------------------VLTAGATSANETLMFCL--AEP-GDAFLLP 141 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCCcChHHe----------------------EEccChHHHHHHHHHHh--CCC-CCEEEEC
Confidence 999999999999843222 12455555 66999999999988755 568 9999999
Q ss_pred CCCCCCcHHHHh-hcCcc--------------------------------------------------------------
Q psy16707 282 TPTWGNHIPICK-HTGLE-------------------------------------------------------------- 298 (420)
Q Consensus 282 dP~w~ny~~i~~-~aG~~-------------------------------------------------------------- 298 (420)
+|+|+.|...+. ..|++
T Consensus 142 ~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~ 221 (468)
T PLN02450 142 TPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFIT 221 (468)
T ss_pred CCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHH
Confidence 999999988776 35543
Q ss_pred -------------------------------------------------------------------hhh-----hhhcc
Q psy16707 299 -------------------------------------------------------------------KIL-----IRAFY 306 (420)
Q Consensus 299 -------------------------------------------------------------------~~~-----~r~~~ 306 (420)
..+ ....+
T Consensus 222 ~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~ 301 (468)
T PLN02450 222 AKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSF 301 (468)
T ss_pred HCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhc
Confidence 000 01224
Q ss_pred CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH--------
Q psy16707 307 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-------- 378 (420)
Q Consensus 307 s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~-------- 378 (420)
++++...|.+++.+|+|.++..+ .++.++.+|+++|+.+.+.|++.| +.+..++.|||.|+.++.
T Consensus 302 ~~~s~~~Q~a~~~~L~~~~~~~~---~l~~~~~~l~~rr~~l~~~L~~~g----i~~~~~~~g~flwi~l~~~~~~~~~~ 374 (468)
T PLN02450 302 GLVSSQTQYLLSALLSDKKFTKN---YLEENQKRLKQRQKKLVSGLEAAG----IKCLKSNAGLFCWVDMRHLLKSNTFE 374 (468)
T ss_pred CCCCHHHHHHHHHHhCCchhHHH---HHHHHHHHHHHHHHHHHHHHHHcC----CcccCCCceEEEEEEchHhcCcCCch
Confidence 45677888888888887533222 466677999999999999999987 566788999999986641
Q ss_pred ---HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 379 ---TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 379 ---~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+..++|++++||.+.|| | ||++++.+++.++...+.|.+++
T Consensus 375 ~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l 428 (468)
T PLN02450 375 AEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFV 428 (468)
T ss_pred HHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 34577888999999996 1 99999888888888777777654
No 53
>PRK07777 aminotransferase; Validated
Probab=99.70 E-value=2.8e-15 Score=152.65 Aligned_cols=234 Identities=13% Similarity=0.138 Sum_probs=156.5
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+..+....+..+...+. ..++|||++|. ++.. .++.+.++....... ....|.+..|.++||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~---p~~~--~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~ 76 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV---RTGAVNLGQGF---PDED--GPPEMLEAAQEAIAG-GVNQYPPGPGIPELRAAIAAQRRR 76 (387)
T ss_pred hhhcCccHHHHHHHHHh---hCCeEEccCCC---CCCC--CCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHH
Confidence 34445556666666664 34789999997 4432 233455554444433 346799999999999999998732
Q ss_pred CCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 219 EDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 219 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
..+....++ +| +.|.||++|+.+++..+ +.| ||.|++++|+|+.|..+++.+|+
T Consensus 77 ~~g~~~~~~~~i----------------------~~t~G~~~al~~~~~~~--~~~-gd~vli~~p~y~~~~~~~~~~g~ 131 (387)
T PRK07777 77 RYGLEYDPDTEV----------------------LVTVGATEAIAAAVLGL--VEP-GDEVLLIEPYYDSYAAVIAMAGA 131 (387)
T ss_pred HhCCCCCCCCcE----------------------EEeCCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhhHHHHHHCCC
Confidence 221112232 34 67999999998877544 457 99999999999999999888776
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 132 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~ 211 (387)
T PRK07777 132 HRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARH 211 (387)
T ss_pred EEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCc
Confidence 4
Q ss_pred -------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707 299 -------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVK 335 (420)
Q Consensus 299 -------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~ 335 (420)
.........+++...+.++...|.++ .+| ++
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~---~~ 285 (387)
T PRK07777 212 LPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE---DAW---VA 285 (387)
T ss_pred ccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCC---cHH---HH
Confidence 01111111223444555555556442 344 45
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------C-HHHHHHHHHhCCeEEeCC-------------
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N-ATQVEKLIKEHSVYLTKD------------- 395 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~-~~~v~~Ll~e~~Vy~~p~------------- 395 (420)
.+++.++++|+.+.+.|++.| |..+++++|+|.|+.+ + .+++++|++++||++.|+
T Consensus 286 ~~~~~~~~~~~~l~~~L~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~ 361 (387)
T PRK07777 286 ALRDSLQAKRDRLAAGLAEAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHL 361 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCe
Confidence 566899999999999999876 6777788999998542 3 466788888999999874
Q ss_pred CcEEEcccCCCCHHHHHHHHHH
Q psy16707 396 GRISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 396 gRis~agl~~~ni~~la~AI~~ 417 (420)
-||+++. ..++++.-.+.|.+
T Consensus 362 ~Ri~~~~-~~~~l~~~l~~l~~ 382 (387)
T PRK07777 362 VRFAFCK-RDDTLDEAIRRLRA 382 (387)
T ss_pred EEEEecC-CHHHHHHHHHHHHH
Confidence 1999974 55555444444444
No 54
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.70 E-value=4.1e-15 Score=152.06 Aligned_cols=237 Identities=14% Similarity=0.088 Sum_probs=166.3
Q ss_pred ccccCCChHHHHHHHHH---ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFK---KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL 215 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~---~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~ 215 (420)
+..+..+++..+.+.++ ++.+.++|+|++|. ++ +++++.++++...... ....|.+..|.++||++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---p~--~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~ 77 (396)
T PRK09147 5 LDRLQPYPFEKLRALFAGVTPPADLPPISLSIGE---PK--HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAAW 77 (396)
T ss_pred hhcCCcchHHHHHHHHHhhhhccCCCeEecCCCC---CC--CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHHH
Confidence 56677788888888775 34567999999996 44 3557788888776553 467899999999999999999
Q ss_pred HcCCCCcc-ccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC--CCEEEEcCCCCCCcHHH
Q psy16707 216 AYGEDCPQ-LKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG--EKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 216 ~~g~~~~~-~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~--gd~VlvpdP~w~ny~~i 291 (420)
+...++.. ++++ +| +.|.|+++++.+++..+. .|+ ||.|++|+|+|+.|..+
T Consensus 78 ~~~~~g~~~~~~~~~i----------------------~it~G~~~al~~~~~~l~--~~~~~gd~vlv~~P~y~~~~~~ 133 (396)
T PRK09147 78 LERRYGLPALDPATQV----------------------LPVNGSREALFAFAQTVI--DRDGPGPLVVCPNPFYQIYEGA 133 (396)
T ss_pred HHHHhCCCcCCccceE----------------------EECCChHHHHHHHHHHHc--CCCCCCCEEEEcCCCccchHHH
Confidence 84332222 3343 44 569999999999887553 341 68999999999999999
Q ss_pred HhhcCcc-------------------------------------------------------------------------
Q psy16707 292 CKHTGLE------------------------------------------------------------------------- 298 (420)
Q Consensus 292 ~~~aG~~------------------------------------------------------------------------- 298 (420)
++..|++
T Consensus 134 ~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 213 (396)
T PRK09147 134 ALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYF 213 (396)
T ss_pred HHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccccccc
Confidence 9888764
Q ss_pred ---------------------------------------------------hhh--hhh-ccCCCchHHHHHHHHHhCCh
Q psy16707 299 ---------------------------------------------------KIL--IRA-FYSSPPIHGARIVQEILGDP 324 (420)
Q Consensus 299 ---------------------------------------------------~~~--~r~-~~s~pp~~ga~iv~~IL~dp 324 (420)
..+ .+. ...+++...|.++...+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~- 292 (396)
T PRK09147 214 DEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWND- 292 (396)
T ss_pred CCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc-
Confidence 000 011 1112333444443333322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC------
Q psy16707 325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD------ 395 (420)
Q Consensus 325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~------ 395 (420)
.+.++..+++|+++|+.+.+.|++. +....+++|+|.|+.++ .+++++|++++||.+.||
T Consensus 293 ------~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~ 361 (396)
T PRK09147 293 ------EAHVRENRALYREKFDAVTPILAPV-----LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLARE 361 (396)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCcccccc
Confidence 2456677789999999999999874 23456789999998653 456688888999999774
Q ss_pred --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++. +++.++...+.|.+++
T Consensus 362 ~~~~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 362 AHGVNPGAGRVRIALVA-PLAECVEAAERIVDFC 394 (396)
T ss_pred ccCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 1 899985 5666666666666654
No 55
>PRK09265 aminotransferase AlaT; Validated
Probab=99.70 E-value=3.6e-15 Score=153.00 Aligned_cols=248 Identities=14% Similarity=0.101 Sum_probs=163.4
Q ss_pred cchhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCC-CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707 133 RFQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQG-KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209 (420)
Q Consensus 133 ~~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg-~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr 209 (420)
.++++ +..+..+.+..+.+.+++. .++++|||++|. |+. ..++++.+.++...... ....|.+..|.++||
T Consensus 5 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~~~~~~~~~~i~~~~~~~~~--~~~~Y~~~~G~~~lr 78 (404)
T PRK09265 5 EKSSK-LENVCYDIRGPVLKEAKRLEEEGHKILKLNIGN---PAPFGFEAPDEILRDVIRNLP--TAQGYSDSKGLFSAR 78 (404)
T ss_pred chhHH-HHhcCcchhHHHHHHHHHHHHcCCCeEEecCCC---CCcCCCCCCHHHHHHHHHHhh--cCCCCCCCCCcHHHH
Confidence 34444 3444444444444444333 456889999995 542 12355555555444332 346899999999999
Q ss_pred HHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 210 ~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
+++++++.......+++++| +.|.|++.++.+++..+ +.| ||.|++++|+|+.|.
T Consensus 79 ~~ia~~~~~~~~~~~~~~~i----------------------~~t~G~~~~l~~~~~~~--~~~-gd~Vlv~~p~y~~~~ 133 (404)
T PRK09265 79 KAIMQYYQQKGIPDVDVDDI----------------------YIGNGVSELIVMAMQAL--LNN-GDEVLVPAPDYPLWT 133 (404)
T ss_pred HHHHHHHhccCCCCCCcccE----------------------EEeCChHHHHHHHHHHh--CCC-CCEEEEeCCCCcChH
Confidence 99999985433222445555 56999999998888655 457 999999999999999
Q ss_pred HHHhhcCcc-----------------------------------------------------------------------
Q psy16707 290 PICKHTGLE----------------------------------------------------------------------- 298 (420)
Q Consensus 290 ~i~~~aG~~----------------------------------------------------------------------- 298 (420)
..++.+|++
T Consensus 134 ~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 213 (404)
T PRK09265 134 AAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKI 213 (404)
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhc
Confidence 988877653
Q ss_pred --------------------------------------------hh----hh------hhccCCCchHHHHHHHHHhCCh
Q psy16707 299 --------------------------------------------KI----LI------RAFYSSPPIHGARIVQEILGDP 324 (420)
Q Consensus 299 --------------------------------------------~~----~~------r~~~s~pp~~ga~iv~~IL~dp 324 (420)
.. ++ .....+++..+|.++..+|.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 293 (404)
T PRK09265 214 LYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGY 293 (404)
T ss_pred cCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCc
Confidence 00 11 1112345666777777767543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---------HHHHHHHHHhCCeEEeCC
Q psy16707 325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------ATQVEKLIKEHSVYLTKD 395 (420)
Q Consensus 325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---------~~~v~~Ll~e~~Vy~~p~ 395 (420)
+|.+++..-..++.++|+.+.+.|++.+ + |....++.|+|.|+.++ .+++..+++++||.+.|+
T Consensus 294 ----~~~~~~~~~~~~~~~~r~~~~~~L~~~~--~-~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg 366 (404)
T PRK09265 294 ----QSINELILPGGRLYEQRDRAWELLNAIP--G-VSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQG 366 (404)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHhcCC--C-CcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECc
Confidence 2222222223467788999999998762 2 67778889999996442 356778889999999885
Q ss_pred --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ ||+++ .+.+.++...+.|.+++
T Consensus 367 ~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl~~~l 399 (404)
T PRK09265 367 TGFNWPEPDHFRIVTL-PRVDDLEEAIGRIGRFL 399 (404)
T ss_pred hhhCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHH
Confidence 1 99995 66666666666666543
No 56
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.70 E-value=3.9e-15 Score=151.63 Aligned_cols=242 Identities=14% Similarity=0.141 Sum_probs=168.2
Q ss_pred chhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
++++ +..+.++++..+...... ..+.++|+|..|. ++ .+.++.|.++...... ....|.|..|.++||++
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ 74 (397)
T PRK07568 3 ISKR-VLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQ---PD--IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELREA 74 (397)
T ss_pred hhhH-hhhCCcchHHHHHHHHHHHHhhCCCEEEecCCC---CC--CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHH
Confidence 4444 555556666666543321 1235689999997 33 3457888888776543 45789999999999999
Q ss_pred HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+++++. ..+..+++++| +.|.||++++.+++..+ +.| ||.|++++|+|++|..+
T Consensus 75 ia~~~~-~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~ 128 (397)
T PRK07568 75 FAKYYK-KWGIDVEPDEI----------------------LITNGGSEAILFAMMAI--CDP-GDEILVPEPFYANYNGF 128 (397)
T ss_pred HHHHHH-HhCCCCCcceE----------------------EEcCChHHHHHHHHHHh--cCC-CCEEEEecCCCccHHHH
Confidence 999885 33323445555 67999999999988755 457 99999999999999988
Q ss_pred HhhcCcc-------------------------------------------------------------------------
Q psy16707 292 CKHTGLE------------------------------------------------------------------------- 298 (420)
Q Consensus 292 ~~~aG~~------------------------------------------------------------------------- 298 (420)
++..|++
T Consensus 129 ~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~ 208 (397)
T PRK07568 129 ATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFV 208 (397)
T ss_pred HHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcc
Confidence 8777653
Q ss_pred -------------------------------------------hhhh------hhccCCCchHHHHHHHHHhCChhhHHH
Q psy16707 299 -------------------------------------------KILI------RAFYSSPPIHGARIVQEILGDPKLKAQ 329 (420)
Q Consensus 299 -------------------------------------------~~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~ 329 (420)
..++ .....+++...|.+++.+|+++ .
T Consensus 209 ~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~- 284 (397)
T PRK07568 209 YDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTP---E- 284 (397)
T ss_pred cCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC---H-
Confidence 0111 1112355677888777777643 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHh-----CCeEEeCC-----
Q psy16707 330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKE-----HSVYLTKD----- 395 (420)
Q Consensus 330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e-----~~Vy~~p~----- 395 (420)
+.++.++.+++++|+.+.+.|++.+ + +....+++|+|.|+.++ .+++++|+++ +||.+.|+
T Consensus 285 --~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~ 359 (397)
T PRK07568 285 --SYFDEVREEYKKRRDILYEELNKIP--G-VVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYA 359 (397)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCC--C-ceecCCCcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcC
Confidence 3455666899999999999998763 1 45566778889887653 3566788765 68999873
Q ss_pred ------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 ------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ ||+++ .+.++++...+.|.+++
T Consensus 360 ~~~~~~~~iRls~~-~~~~~~~~~~~~l~~~l 390 (397)
T PRK07568 360 TPGLGKNEIRIAYV-LNEEDLKRAMEILKEAL 390 (397)
T ss_pred CCCCCCCeEEEEEe-CCHHHHHHHHHHHHHHH
Confidence 1 99997 45677666666666554
No 57
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.70 E-value=2.4e-15 Score=154.36 Aligned_cols=238 Identities=18% Similarity=0.170 Sum_probs=167.6
Q ss_pred CChHHHHHHHHHcc--CCCCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCC
Q psy16707 144 VPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGE 219 (420)
Q Consensus 144 ~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~ 219 (420)
+.+|..+....++. ++.++|+|++|. |+ +.+++++.+.++............|.|..|.++||+++++++...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 89 (403)
T TIGR01265 13 VNPIRAIVDNLKVKPNPEKPIIPLSHGD---PSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSD 89 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEeCCCC---CCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 45666666666553 357999999996 54 456777888888777654333458999999999999999988543
Q ss_pred CCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-
Q psy16707 220 DCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE- 298 (420)
Q Consensus 220 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~- 298 (420)
.+..+.+++| +.|.|||+|+.+++..+. .| ||+|++++|+|+.|...++..|++
T Consensus 90 ~~~~~~~~~i----------------------i~t~G~t~al~~~~~~l~--~~-gd~Vlv~~p~y~~~~~~~~~~g~~~ 144 (403)
T TIGR01265 90 LPGKLTADDV----------------------VLTSGCSQAIEICIEALA--NP-GANILVPRPGFPLYDTRAAFSGLEV 144 (403)
T ss_pred cCCCCCHHHE----------------------EEecChHHHHHHHHHHhC--CC-CCEEEEeCCCchhHHHHHHHcCCEE
Confidence 3333445555 669999999999988663 57 999999999999999888877754
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 145 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 224 (403)
T TIGR01265 145 RLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPM 224 (403)
T ss_pred EEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccch
Confidence
Q ss_pred ---------------------------------h-h-----hhhh------ccCCCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707 299 ---------------------------------K-I-----LIRA------FYSSPPIHGARIVQEILGDPKLKAQWLTE 333 (420)
Q Consensus 299 ---------------------------------~-~-----~~r~------~~s~pp~~ga~iv~~IL~dp~L~~~w~~e 333 (420)
. . +++. ...+++...|.++..+|.+ .+...
T Consensus 225 ~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-----~~~~~ 299 (403)
T TIGR01265 225 ASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILEN-----TPQEF 299 (403)
T ss_pred hhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh-----ChHHH
Confidence 0 0 1111 1234566666666665542 12355
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC-------
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG------- 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g------- 396 (420)
++.++++++++|+.+.+.|+..+ + +....++.|+|.|+.++ .+.++.|++++||.+.||.
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~ 376 (403)
T TIGR01265 300 FDGKISVLKSNAELCYEELKDIP--G-LVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNW 376 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--C-ceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCe
Confidence 66677899999999999998762 1 55556789999997552 3556888889999999862
Q ss_pred -cEEEcccCCCCHHHHHHHHHHH
Q psy16707 397 -RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 397 -Ris~agl~~~ni~~la~AI~~v 418 (420)
||+++ ...++++.-.+.|.+.
T Consensus 377 iRis~~-~~~~~l~~~l~~l~~~ 398 (403)
T TIGR01265 377 VRITIT-VPESMLEEACSRIKEF 398 (403)
T ss_pred EEEEec-CCHHHHHHHHHHHHHH
Confidence 99998 3455555544444443
No 58
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.70 E-value=2e-15 Score=155.48 Aligned_cols=220 Identities=14% Similarity=0.116 Sum_probs=149.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccC-CceeeecccCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKD-NLISIVQGISG 237 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~-~~i~~~~~~~~ 237 (420)
..+.|||++|. ++. .++++.+.++......+.....|.+..|.++||+++++++-...+..+++ +.|
T Consensus 38 ~~~~i~l~~g~---~~~-~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I-------- 105 (405)
T PRK06207 38 PGRPVDFSHGD---VDA-HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADEL-------- 105 (405)
T ss_pred CCCceecCCcC---CCC-CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCE--------
Confidence 35789999996 553 23445555555554433345689999999999999999984322222344 455
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||+|++++|+|+.|..+++..|++
T Consensus 106 --------------~it~Ga~~al~~~~~~l--~~~-Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~ 168 (405)
T PRK06207 106 --------------IITPGTQGALFLAVAAT--VAR-GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDL 168 (405)
T ss_pred --------------EEeCCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCH
Confidence 56999999999988755 457 999999999999999988877653
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 169 ~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~S 248 (405)
T PRK06207 169 DQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMG 248 (405)
T ss_pred HHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEec
Confidence
Q ss_pred ------------------------hhhhhh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ------------------------KILIRA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ 353 (420)
Q Consensus 299 ------------------------~~~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~ 353 (420)
....+. ...+++...|.++..+|.++ ..|. +...++++++|+.+.+.|+
T Consensus 249 fSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~---~~~~~~~~~~r~~l~~~L~ 322 (405)
T PRK06207 249 PSKTESLSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP---DGWM---KDRIARHQAIRDDLLRVLR 322 (405)
T ss_pred chhhccCcccceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc---HHHH---HHHHHHHHHHHHHHHHHHh
Confidence 111122 22234556677676666542 2343 3344677888999999998
Q ss_pred hcCCCCCCcccCCCCceEEecCCC------HHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHH
Q psy16707 354 KEGSNKPWNHITDQIGMFCYTGLN------ATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 354 ~~g~~~~w~~i~~q~GmF~~~~l~------~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~ 417 (420)
+.. + +....++.|+|.|+.++ .++++.|++++||.+.||. |||++. +.+.++.-.+.|.+
T Consensus 323 ~~~--~-~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~ 398 (405)
T PRK06207 323 GVE--G-VFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQ 398 (405)
T ss_pred cCC--C-ceecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 762 1 56667788999997553 3566888789999999851 999985 55554444444433
No 59
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.70 E-value=1.1e-15 Score=162.75 Aligned_cols=108 Identities=11% Similarity=0.012 Sum_probs=79.0
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC-CccccCCceeeecccCCCC
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED-CPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~-~~~~~~~~i~~~~~~~~~~ 239 (420)
++|||++|. +| .++++.|.++.+.+.. . .|++..|++++|+++++.+.... .....+. .
T Consensus 101 ~~i~l~~g~---p~--~~~~~~v~e~~~~~~~---~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~--------~--- 160 (527)
T PRK09275 101 DAVSYVRDQ---LG--FDADEFVYELVDGIIG---D-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPK--------G--- 160 (527)
T ss_pred HHHhhcCCC---CC--CCCCHHHHHHHHHHhc---C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCC--------C---
Confidence 569999997 54 4668889888777642 2 49999999999999999775421 1000010 0
Q ss_pred ccccccccccceeecccchHHHHHHHHHHH---hcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLK---NFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~---~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
+.+|+.|.||++|+..++..|. .+.| ||+|++|+|+|++|..+++.+|.
T Consensus 161 --------~~~I~vT~Ga~~al~~~~~aL~~~~ll~p-GD~Vlv~~P~y~~Y~~~~~l~g~ 212 (527)
T PRK09275 161 --------EFDLFAVEGGTAAMCYIFDSLKENGLLKA-GDKIALMTPIFTPYLEIPELPRY 212 (527)
T ss_pred --------cCeEEEeCCHHHHHHHHHHHHhhhhcCCC-CCEEEEeCCChHHHHHHHHHcCC
Confidence 0134779999999998876432 3568 99999999999999999887753
No 60
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.69 E-value=2e-15 Score=157.91 Aligned_cols=239 Identities=15% Similarity=0.245 Sum_probs=167.9
Q ss_pred CCChHHHHHHHHHccC-----CCC-ceeecccccccCCCCCCchHHHHHHHHHHHc----------c-CCCCCCCCCCCC
Q psy16707 143 KVPSSNLLTEAFKKDT-----NVN-KINLGVGAYRDDQGKPYVLPSVKQADEIVLN----------K-NLDKEYAPIIGA 205 (420)
Q Consensus 143 ~~d~i~~l~~~~~~d~-----~~~-kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~----------~-~~~~~Y~p~~G~ 205 (420)
...+.+.--+++.+|+ +|+ .||||+-+ +.-..+.+.+-.+...+ . ....-|.+..|.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~ae------N~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~ 97 (447)
T PLN02607 24 EDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAE------NQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGL 97 (447)
T ss_pred CCchHHHHHHHhcCCCCCcccCCCceEEEechh------hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcch
Confidence 4566766666666653 443 89999985 23344444443332111 0 122458899999
Q ss_pred HHHHHHHHHHHcCCCC--ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCC
Q psy16707 206 PDFGKLAAQLAYGEDC--PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTP 283 (420)
Q Consensus 206 ~~fr~a~~~~~~g~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP 283 (420)
+.||+++++++....+ ..+++++| +.|.|+++++.+.+..+ +.| ||.|+||+|
T Consensus 98 ~~LR~aiA~~l~~~~~~~~~v~p~~I----------------------vit~G~t~al~~l~~~l--~~p-GD~Vlv~~P 152 (447)
T PLN02607 98 KSFRQAMASFMEQIRGGKARFDPDRI----------------------VLTAGATAANELLTFIL--ADP-GDALLVPTP 152 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHHHe----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCC
Confidence 9999999999954322 13455555 67999999999987755 568 999999999
Q ss_pred CCCCcHHHHhh-cCcc----------------------------------------------------------------
Q psy16707 284 TWGNHIPICKH-TGLE---------------------------------------------------------------- 298 (420)
Q Consensus 284 ~w~ny~~i~~~-aG~~---------------------------------------------------------------- 298 (420)
+|++|...++. .|++
T Consensus 153 ~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~ 232 (447)
T PLN02607 153 YYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK 232 (447)
T ss_pred CCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence 99999887763 4432
Q ss_pred ---------------------------------------------------------------hhh---h--hhccCCCc
Q psy16707 299 ---------------------------------------------------------------KIL---I--RAFYSSPP 310 (420)
Q Consensus 299 ---------------------------------------------------------------~~~---~--r~~~s~pp 310 (420)
..+ . .+.++++|
T Consensus 233 ~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s 312 (447)
T PLN02607 233 NIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVS 312 (447)
T ss_pred CCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCC
Confidence 011 1 12344567
Q ss_pred hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH-----------H
Q psy16707 311 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-----------T 379 (420)
Q Consensus 311 ~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~-----------~ 379 (420)
...|.+++.+|+|+++.. +.++.+++|++++|+.+.+.|++.| +.++..+.|+|+|+.++. +
T Consensus 313 ~~~q~~~~~~L~d~~~~~---~~l~~~r~~l~~~~~~~~~~L~~~g----i~~~~~~ag~fvw~~L~~~~~~~~~~~e~~ 385 (447)
T PLN02607 313 SQTQHLLASMLSDEEFTE---NYIRTNRERLRKRYEMIVQGLRRAG----IECLKGNAGLFCWMNLSPLLETPTREGELA 385 (447)
T ss_pred HHHHHHHHHHhCCchhHH---HHHHHHHHHHHHHHHHHHHHHHhCC----CCcccCCeeEEEEEEchHhhcCCCchhHHH
Confidence 788999999999865433 3456677999999999999999987 456778899999986642 2
Q ss_pred HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 380 QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 380 ~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
..++|++++||++.|| | ||+|+.++++.++.-.+.|.+++
T Consensus 386 l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l 435 (447)
T PLN02607 386 LWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFM 435 (447)
T ss_pred HHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 3468888999999996 2 99999877777776666666553
No 61
>PRK12414 putative aminotransferase; Provisional
Probab=99.69 E-value=3.5e-15 Score=152.27 Aligned_cols=211 Identities=18% Similarity=0.264 Sum_probs=156.0
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccC-Cceeeecc
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKD-NLISIVQG 234 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~-~~i~~~~~ 234 (420)
.++.|||+.|. ++ +++++.+.++...+..+ ....|.|..|.++||+++++++ +|.+ +++ +.|
T Consensus 28 ~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~---~~~~~~i----- 93 (384)
T PRK12414 28 QHDALNLSQGA---PN--FAPDPALVEGVARAMRD-GHNQYAPMAGIAALREALAEKTERLYGAR---YDPASEV----- 93 (384)
T ss_pred hCCeEEcCCCC---CC--CCCCHHHHHHHHHHHHh-CCCCcCCCCCcHHHHHHHHHHHHHHhCCC---CCCCCcE-----
Confidence 45789999997 43 45678888887776543 3578999999999999999987 3432 222 334
Q ss_pred cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------
Q psy16707 235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------- 298 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------- 298 (420)
+.|.||+.++.+++..+ +.| ||.|++++|+|+.|..+++.+|++
T Consensus 94 -----------------~it~g~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~ 153 (384)
T PRK12414 94 -----------------TVIASASEGLYAAISAL--VHP-GDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWD 153 (384)
T ss_pred -----------------EEECChHHHHHHHHHHh--cCC-CCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHH
Confidence 67999999999888644 557 999999999999999999988774
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 154 ~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~Sf 233 (384)
T PRK12414 154 EVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSF 233 (384)
T ss_pred HHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecc
Confidence
Q ss_pred ------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16707 299 ------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQK 354 (420)
Q Consensus 299 ------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~ 354 (420)
..+......+++...|.++..+|.++. .|. .++..|+++|+.+.+.|++
T Consensus 234 SK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~---~~~----~~~~~~~~~r~~l~~~L~~ 306 (384)
T PRK12414 234 GKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPA---SYL----GLGAFYQRKRDLLARELAG 306 (384)
T ss_pred cccccCccceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCCh---HHH----HHHHHHHHHHHHHHHHHHh
Confidence 111111233456778888888787642 232 3567899999999999998
Q ss_pred cCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCC----------C--cEEEcccCCCCHHHHHHHH
Q psy16707 355 EGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKD----------G--RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 355 ~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~----------g--Ris~agl~~~ni~~la~AI 415 (420)
.| |...++++|||.|..+ +.+++..+++++||.+.|+ + ||+++. + .+.+.+++
T Consensus 307 ~g----~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~---~~~~~~~~ 378 (384)
T PRK12414 307 SR----FELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-D---DATLVEGA 378 (384)
T ss_pred CC----CeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-C---HHHHHHHH
Confidence 76 6667788999999632 3567778889999999984 1 899983 3 56666666
Q ss_pred HHH
Q psy16707 416 HAV 418 (420)
Q Consensus 416 ~~v 418 (420)
++.
T Consensus 379 ~rl 381 (384)
T PRK12414 379 RRL 381 (384)
T ss_pred HHH
Confidence 553
No 62
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.69 E-value=4.1e-15 Score=150.17 Aligned_cols=225 Identities=16% Similarity=0.158 Sum_probs=157.4
Q ss_pred ChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcc-
Q psy16707 145 PSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQ- 223 (420)
Q Consensus 145 d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~- 223 (420)
++++......+. ...++|||+.|. ++ .++++.+.++...+. ....|.+..|.++||+++++++....+..
T Consensus 7 ~~~~~~~~~~~~-~~~~~i~l~~~~---p~--~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~ 77 (357)
T TIGR03539 7 DSLAPYKAKAAS-HPDGIVDLSVGT---PV--DPVPPLIRAALAAAA---DAPGYPQTWGTPELREAIVDWLERRRGVPG 77 (357)
T ss_pred HHHHHHHHHhhh-CCCCeEEccCCC---CC--CCCCHHHHHHHHHHH---hhCCCCcccCCHHHHHHHHHHHHHhcCCCC
Confidence 445555555543 346789999995 54 355777777776654 24689999999999999999984433322
Q ss_pred ccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-----
Q psy16707 224 LKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----- 298 (420)
Q Consensus 224 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----- 298 (420)
+++++| +.|.|+++++.+++.++. ..| ||.|++++|+|+.|...++..|++
T Consensus 78 ~~~~~I----------------------~it~G~~~~i~~~~~~l~-~~~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 133 (357)
T TIGR03539 78 LDPTAV----------------------LPVIGTKELVAWLPTLLG-LGP-GDTVVIPELAYPTYEVGALLAGATPVAAD 133 (357)
T ss_pred CCcCeE----------------------EEccChHHHHHHHHHHHc-CCC-CCEEEECCCCcHHHHHHHHhcCCEEeccC
Confidence 455655 569999999998776542 357 999999999999999988888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 134 ~~~~l~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 213 (357)
T TIGR03539 134 DPTELDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVH 213 (357)
T ss_pred ChhhcCccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEe
Confidence
Q ss_pred --------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 --------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL 352 (420)
Q Consensus 299 --------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L 352 (420)
....+....+++..+|.++...|.+ . +.++.++.+++++|+.+.+.|
T Consensus 214 S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~---~~~~~~~~~~~~~~~~~~~~L 286 (357)
T TIGR03539 214 SLSKRSNLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD----D---GHVAEQKARYAARRAQLKPAL 286 (357)
T ss_pred ccccccCCCceeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC----H---HHHHHHHHHHHHHHHHHHHHH
Confidence 0111122234556666666665654 1 334556789999999999999
Q ss_pred HhcCCCCCCcccCCCCceEEecCC--CHHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHH
Q psy16707 353 QKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 353 ~~~g~~~~w~~i~~q~GmF~~~~l--~~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~ 417 (420)
++.| +...+++.|+|.|..+ +...+...++++||.+.|+. |||++. + -+.+.++|++
T Consensus 287 ~~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~---~~~i~~~~~~ 355 (357)
T TIGR03539 287 EKAG----FRIDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-T---DERIAAAVAR 355 (357)
T ss_pred HHcC----CCCcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-C---HHHHHHHHHh
Confidence 9876 5567788999999754 44444444579999998851 999985 3 3566666543
No 63
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.69 E-value=6.8e-15 Score=150.29 Aligned_cols=128 Identities=15% Similarity=0.078 Sum_probs=94.8
Q ss_pred ccccCCChHHHHHHHHHc---cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKK---DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL 215 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~---d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~ 215 (420)
+..+..+++..+.+.+.+ ..+.+.|||++|. ++ ..+++.++++...... ....|.|..|.++||++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---p~--~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~ 76 (393)
T TIGR03538 4 LSRLQPYPFEKLAALLAGVTPPASKPPIALSIGE---PK--HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARW 76 (393)
T ss_pred hhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCC---CC--CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHH
Confidence 344566777777766642 3467899999997 43 3457888888777543 467899999999999999999
Q ss_pred HcCCCCcc--ccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCE--EEEcCCCCCCcHH
Q psy16707 216 AYGEDCPQ--LKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKV--IYVPTPTWGNHIP 290 (420)
Q Consensus 216 ~~g~~~~~--~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~--VlvpdP~w~ny~~ 290 (420)
+...++.. ++++ .| +.|.|+++++.+++..+ +.| ||. |++|+|+|+.|..
T Consensus 77 ~~~~~~~~~~~~~~~~i----------------------~it~Ga~~al~~~~~~l--~~~-gd~~~vlv~~P~y~~~~~ 131 (393)
T TIGR03538 77 LERRFDLPTGVDPERHV----------------------LPVNGTREALFAFAQAV--INP-GQAPLVVMPNPFYQIYEG 131 (393)
T ss_pred HHHhhCCcccCCCCceE----------------------EECCCcHHHHHHHHHHH--cCC-CCcceEEecCCCCcchHH
Confidence 84432211 3332 34 56999999999988755 457 875 9999999999999
Q ss_pred HHhhcCcc
Q psy16707 291 ICKHTGLE 298 (420)
Q Consensus 291 i~~~aG~~ 298 (420)
+++..|++
T Consensus 132 ~~~~~g~~ 139 (393)
T TIGR03538 132 AALLAGAE 139 (393)
T ss_pred HHHhcCCe
Confidence 88877764
No 64
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.69 E-value=2.5e-15 Score=157.75 Aligned_cols=230 Identities=17% Similarity=0.190 Sum_probs=175.3
Q ss_pred cCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc--CC-CCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeec
Q psy16707 157 DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NL-DKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQ 233 (420)
Q Consensus 157 d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~-~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~ 233 (420)
...+..|+++.|. ++....+....+++...+... .. ...|.+..|.+++|+++++++.-..+...++++|
T Consensus 86 ~~~~~~i~f~~g~---p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~I---- 158 (459)
T COG1167 86 EDDPSVIDFAGGL---PDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQI---- 158 (459)
T ss_pred cCCCceecCCCCC---CCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeE----
Confidence 4458899999997 556667788888887777643 22 4588899999999999999997222333455556
Q ss_pred ccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------
Q psy16707 234 GISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------- 298 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------- 298 (420)
+.|.|.+.|+.+++.++. .| ||+|++.+|||+....+++..|++
T Consensus 159 ------------------iiT~G~q~al~l~~~~l~--~p-Gd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~ 217 (459)
T COG1167 159 ------------------VITSGAQQALDLLLRLLL--DP-GDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEA 217 (459)
T ss_pred ------------------EEeCCHHHHHHHHHHHhC--CC-CCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHH
Confidence 569999999999998764 48 999999999999999999999986
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 218 le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSF 297 (459)
T COG1167 218 LEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSF 297 (459)
T ss_pred HHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeee
Confidence
Q ss_pred -----------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy16707 299 -----------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE 355 (420)
Q Consensus 299 -----------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~ 355 (420)
..........++.+.|.+++.-|.+ +.|.++++.|+..|+++|+.+.+.|++.
T Consensus 298 SK~l~PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~----G~~~~hl~~lR~~y~~rr~~l~~~L~~~ 373 (459)
T COG1167 298 SKTLAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLS----GHYDRHLRRLRREYARRRDALLEALAEY 373 (459)
T ss_pred hhhcccccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1112333345577777777776653 5788999999999999999999999998
Q ss_pred CCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeC-C------------CcEEEcccCCCCHHHHHHHHHHH
Q psy16707 356 GSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTK-D------------GRISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 356 g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p-~------------gRis~agl~~~ni~~la~AI~~v 418 (420)
+.+ -.....+.+|||.|+.++ +..+-....+.||.+.| | -|+|++..+++.++.-.+.+.++
T Consensus 374 ~~~-~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~ 452 (459)
T COG1167 374 LPE-LATWTRPEGGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAAL 452 (459)
T ss_pred CCC-CeeeecCCceEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 642 233566778999998554 34444444678888887 3 19999999998888777777666
Q ss_pred h
Q psy16707 419 T 419 (420)
Q Consensus 419 v 419 (420)
+
T Consensus 453 ~ 453 (459)
T COG1167 453 L 453 (459)
T ss_pred H
Confidence 5
No 65
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.68 E-value=4.3e-15 Score=152.46 Aligned_cols=225 Identities=16% Similarity=0.170 Sum_probs=158.8
Q ss_pred HHHHHHHc-cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC----CCCCCCCCCCCHHHHHHHHHHHcCCCCcc
Q psy16707 149 LLTEAFKK-DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN----LDKEYAPIIGAPDFGKLAAQLAYGEDCPQ 223 (420)
Q Consensus 149 ~l~~~~~~-d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~----~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~ 223 (420)
.+.+.+++ +++.++|+|+.|. + .+++++.|.++......+. ...+|.|..|.++||+++++++++..
T Consensus 21 ~~~~~~~~~~~~~~~i~l~~~~---~--~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~--- 92 (402)
T TIGR03542 21 RRVNEFRKKHPSADIIRLGIGD---T--TQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGR--- 92 (402)
T ss_pred HHHHHHHhccCCCCeEEcCCCC---C--CCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcC---
Confidence 34444443 3567899999996 3 3456777777776655431 23579999999999999999876532
Q ss_pred ccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc------
Q psy16707 224 LKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL------ 297 (420)
Q Consensus 224 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~------ 297 (420)
+++++| +.|.|++.++.+...+ +.| ||.|++++|+|+.|..+++..|+
T Consensus 93 ~~~d~I----------------------~it~Ga~~al~~l~~l---~~~-gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 146 (402)
T TIGR03542 93 IDPEEI----------------------FISDGAKCDVFRLQSL---FGS-DNTVAVQDPVYPAYVDSNVMAGRAGVLDD 146 (402)
T ss_pred CCHHHE----------------------EECCCcHHHHHHHHHh---cCC-CCEEEEeCCCCcchHHHHHHcCCcccccc
Confidence 455655 5699999999876543 347 89999999999999999998887
Q ss_pred -----c--------------------------------------------------------------------------
Q psy16707 298 -----E-------------------------------------------------------------------------- 298 (420)
Q Consensus 298 -----~-------------------------------------------------------------------------- 298 (420)
+
T Consensus 147 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~ 226 (402)
T TIGR03542 147 DGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPH 226 (402)
T ss_pred ccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCc
Confidence 4
Q ss_pred -----------------------------------hhhh---------------hhccCCCchHHHHHHHHHhCChhhHH
Q psy16707 299 -----------------------------------KILI---------------RAFYSSPPIHGARIVQEILGDPKLKA 328 (420)
Q Consensus 299 -----------------------------------~~~~---------------r~~~s~pp~~ga~iv~~IL~dp~L~~ 328 (420)
..++ ...+.+++...|.++..+|.+..
T Consensus 227 ~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~--- 303 (402)
T TIGR03542 227 SIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEG--- 303 (402)
T ss_pred chhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcc---
Confidence 1111 12233456667776666676532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------
Q psy16707 329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD-------- 395 (420)
Q Consensus 329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~-------- 395 (420)
| +.++.++..++++|+.+.+.|++.| +....+.+|+|.|+.++ .++++.|++++||.+.|+
T Consensus 304 -~-~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~ 377 (402)
T TIGR03542 304 -L-QPILEAISYYMENARILRKALEAAG----FKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGE 377 (402)
T ss_pred -h-hHHHHHHHHHHHHHHHHHHHHHhcC----ceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 2 2234455788999999999999876 55555668999997653 356788888999999985
Q ss_pred C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 396 G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 396 g--Ris~agl~~~ni~~la~AI~~ 417 (420)
+ ||++++ ++++++...+.|.+
T Consensus 378 ~~iRis~~~-~~~~l~~~l~~l~~ 400 (402)
T TIGR03542 378 GFVRFSAFG-KRENIVEACERIKE 400 (402)
T ss_pred CEEEEEecC-CHHHHHHHHHHHHh
Confidence 1 999875 66665555555554
No 66
>PRK08363 alanine aminotransferase; Validated
Probab=99.68 E-value=5.6e-15 Score=151.17 Aligned_cols=221 Identities=12% Similarity=0.111 Sum_probs=155.5
Q ss_pred CCCCceeecccccccCC-CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707 158 TNVNKINLGVGAYRDDQ-GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~d-g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~ 236 (420)
.+.++|||+.|. |. ...++++.+.++......+ ....|.|..|.++||+++++++...++..+++++|
T Consensus 28 ~~~~~i~l~~g~---p~~~~~~p~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i------- 96 (398)
T PRK08363 28 KGIKVIRLNIGD---PVKFDFQPPEHMKEAYCRAIKE-GHNYYGPSEGLPELREAIVKREKRKNGVDITPDDV------- 96 (398)
T ss_pred cCCCeEEEeCCC---CCcCCCCCCHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhE-------
Confidence 346899999996 53 1245677888887776543 34679999999999999999985443333556655
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.|++.++.+++..+ +.| ||.|++++|+|+.|...++..|+.
T Consensus 97 ---------------~it~G~~~al~~~~~~~--~~~-gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~ 158 (398)
T PRK08363 97 ---------------RVTAAVTEALQLIFGAL--LDP-GDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDD 158 (398)
T ss_pred ---------------EEeCCHHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHH
Confidence 56999999999988755 557 999999999999999888877653
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 159 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 238 (398)
T PRK08363 159 IRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKV 238 (398)
T ss_pred HHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhc
Confidence
Q ss_pred ------------h--------hhhh-------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ------------K--------ILIR-------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDN 351 (420)
Q Consensus 299 ------------~--------~~~r-------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~ 351 (420)
. .+.. ..+ +++...+.++..+|.+ +.+.+++++++++++|+.+.+.
T Consensus 239 ~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~-~~s~~~q~~~~~~l~~------~~~~l~~~~~~~~~~~~~l~~~ 311 (398)
T PRK08363 239 YFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRL-CPNTPAQFAAIAGLTG------PMDYLEEYMKKLKERRDYIYKR 311 (398)
T ss_pred cCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccc-cCChHHHHHHHHHHhC------ChHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 012 3455566666665643 1244556678999999999999
Q ss_pred HHhcCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHH
Q psy16707 352 LQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKA 414 (420)
Q Consensus 352 L~~~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~A 414 (420)
|++.+ + |....+++|+|.|..+ +.+++..+++++||.+.|+. |||++ .+++.++...+.
T Consensus 312 L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~~~~~l~~~l~~ 387 (398)
T PRK08363 312 LNEIP--G-ISTTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL-PPVEILEEAMDR 387 (398)
T ss_pred HhcCC--C-CEecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHH
Confidence 98762 2 6666778888988532 34667788899999998852 99997 455555555555
Q ss_pred HHHH
Q psy16707 415 IHAV 418 (420)
Q Consensus 415 I~~v 418 (420)
|.++
T Consensus 388 l~~~ 391 (398)
T PRK08363 388 FEEF 391 (398)
T ss_pred HHHH
Confidence 5443
No 67
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.68 E-value=6.8e-15 Score=155.87 Aligned_cols=242 Identities=16% Similarity=0.165 Sum_probs=168.9
Q ss_pred ccCCChHHHHHHHHHccC-----CC-CceeecccccccCCCC--CCchHHHHHHHHHH-H------ccCCCCCCCCCCCC
Q psy16707 141 SVKVPSSNLLTEAFKKDT-----NV-NKINLGVGAYRDDQGK--PYVLPSVKQADEIV-L------NKNLDKEYAPIIGA 205 (420)
Q Consensus 141 ~~~~d~i~~l~~~~~~d~-----~~-~kInL~iG~y~d~dg~--~~~~~~V~~a~~~~-~------~~~~~~~Y~p~~G~ 205 (420)
+....+.|.--+++.+++ ++ .+|+|++-+ +.. ....+-|+++.... . .-.....|.+..|.
T Consensus 21 ~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aE----N~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~ 96 (496)
T PLN02376 21 HGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAE----NQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGL 96 (496)
T ss_pred cCCCCchHHHHHHHhCCCCCcccCCCceEEeecch----hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCc
Confidence 445667777777887764 34 589999874 221 12234444432210 0 00233569999999
Q ss_pred HHHHHHHHHHHcCCCC--ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCC
Q psy16707 206 PDFGKLAAQLAYGEDC--PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTP 283 (420)
Q Consensus 206 ~~fr~a~~~~~~g~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP 283 (420)
++||+++++++....+ ..+++++| +.|.|+++|+.+++..| +.| ||.|++|+|
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~I----------------------vit~Ga~~al~~l~~~l--~~p-GD~Vlv~~P 151 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERV----------------------VMSGGATGANETIMFCL--ADP-GDVFLIPSP 151 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhE----------------------EEccchHHHHHHHHHHh--CCC-CCEEEECCC
Confidence 9999999999853322 22455655 67999999999998765 458 999999999
Q ss_pred CCCCcHHHHh-hcCcc----------------------------------------------------------------
Q psy16707 284 TWGNHIPICK-HTGLE---------------------------------------------------------------- 298 (420)
Q Consensus 284 ~w~ny~~i~~-~aG~~---------------------------------------------------------------- 298 (420)
+|+.|...++ .+|++
T Consensus 152 ~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~ 231 (496)
T PLN02376 152 YYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK 231 (496)
T ss_pred CccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 9999998776 35654
Q ss_pred -------------------------------------------------------------------hhh--hhhccCCC
Q psy16707 299 -------------------------------------------------------------------KIL--IRAFYSSP 309 (420)
Q Consensus 299 -------------------------------------------------------------------~~~--~r~~~s~p 309 (420)
... ....++..
T Consensus 232 ~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~v 311 (496)
T PLN02376 232 NIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLV 311 (496)
T ss_pred CCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCC
Confidence 000 02223445
Q ss_pred chHHHHHHHHHhCChhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----------
Q psy16707 310 PIHGARIVQEILGDPKLKAQW-LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------- 377 (420)
Q Consensus 310 p~~ga~iv~~IL~dp~L~~~w-~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------- 377 (420)
+...|.+++.+|+|+ +| .+.++.++++++++|+.+.+.|++.| +.++.++.|+|.|+.++
T Consensus 312 s~~~Q~a~~~~L~d~----~~~~~~l~~~r~~l~~r~~~l~~~L~~~g----i~~~~~~aG~flwi~l~~~~~~~~~~~~ 383 (496)
T PLN02376 312 SSQTQLMLASMLSDD----QFVDNFLMESSRRLGIRHKVFTTGIKKAD----IACLTSNAGLFAWMDLRHLLRDRNSFES 383 (496)
T ss_pred CHHHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCceEEEEEEchhhhccCCchhH
Confidence 777888888888874 56 45678888999999999999999877 56677899999997553
Q ss_pred -HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 378 -ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 378 -~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
.+.++.|++++||.+.|| | ||+|+..+.+.++.-.+.|.+++
T Consensus 384 e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 384 EIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFV 436 (496)
T ss_pred HHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 234567888899999996 2 99999766666555555555443
No 68
>KOG0257|consensus
Probab=99.67 E-value=7.9e-15 Score=148.84 Aligned_cols=129 Identities=15% Similarity=0.049 Sum_probs=96.8
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
....+++..-.+++.+.+-..+++ ||.|. .+.++|+.|.+|...+..+...++|++..|+|++++++++.+-.
T Consensus 12 l~~~~~~vw~e~~~la~e~~~~~~--LgqGf-----p~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se 84 (420)
T KOG0257|consen 12 LSTSKPYVWTEINRLAAEHKVPNP--LGQGF-----PDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSE 84 (420)
T ss_pred ccccCCcHHHHHHHHHHhcCCCCc--ccCCC-----CCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHH
Confidence 344445555566655544333332 99996 45588999999988888776789999999999999999998844
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
..+.. ++|.++ |.+|.|+.+++..+.. ..+++ ||+|+|.+|.|++|.+.++++|.+
T Consensus 85 ~~~~~--------~~~~~e-------------VlVT~GA~~ai~~~~~--~l~~~-GDeVii~eP~fd~Y~~~~~maG~t 140 (420)
T KOG0257|consen 85 FYGGL--------LDPDDE-------------VLVTAGANEAISSALL--GLLNP-GDEVIVFEPFFDCYIPQVVMAGGT 140 (420)
T ss_pred Hhccc--------cCCccc-------------EEEecCchHHHHHHHH--HHcCC-CCEEEEecCcchhhhhHHhhcCCc
Confidence 22211 233232 5779999999997765 34678 999999999999999999999986
No 69
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.66 E-value=1.1e-14 Score=149.70 Aligned_cols=236 Identities=11% Similarity=0.016 Sum_probs=158.3
Q ss_pred HHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC----CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCc
Q psy16707 153 AFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN----LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNL 228 (420)
Q Consensus 153 ~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~----~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~ 228 (420)
..+...++++|||++|. ++..+++.+.++++...+.+++ ....|.+..|.++||+++++++....+..+++++
T Consensus 23 ~~~~~~~~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~ 99 (416)
T PRK09440 23 LNDGLRTPGAIMLGGGN---PAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQN 99 (416)
T ss_pred HHHHhcCCCceeccCCC---CCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhh
Confidence 33334457789999996 5543445567888877765432 2358999999999999999999433322355666
Q ss_pred eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc---CCCCCEEEE-cCCCCCCcHHHHhhc---------
Q psy16707 229 ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF---FPGEKVIYV-PTPTWGNHIPICKHT--------- 295 (420)
Q Consensus 229 i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~---~p~gd~Vlv-pdP~w~ny~~i~~~a--------- 295 (420)
| +.|.|++.++.+++..+..- .| ||.|++ ++|+||.|.......
T Consensus 100 I----------------------~it~Ga~~al~~~~~~l~~~~~~~~-gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~ 156 (416)
T PRK09440 100 I----------------------ALTNGSQSAFFYLFNLFAGRRADGS-LKKILFPLAPEYIGYADAGLEEDLFVSYRPN 156 (416)
T ss_pred E----------------------EEccChHHHHHHHHHHHhccccCCC-CCeEEEecCCCchhhHHHhhccCceeecccc
Confidence 6 56999999999998766431 25 899999 699999988632211
Q ss_pred -----------Ccc------------------------------------------------------------------
Q psy16707 296 -----------GLE------------------------------------------------------------------ 298 (420)
Q Consensus 296 -----------G~~------------------------------------------------------------------ 298 (420)
+..
T Consensus 157 ~~~~~~~~~~~~~d~~~l~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~ 236 (416)
T PRK09440 157 IELLPEGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPL 236 (416)
T ss_pred cccccccccccCCCHHHcccCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCcc
Confidence 110
Q ss_pred ---------------------------------hhhhhhcc-CCCchHHHHHHHHHhCChhhHHHHHHHHHH-HHHHHHH
Q psy16707 299 ---------------------------------KILIRAFY-SSPPIHGARIVQEILGDPKLKAQWLTEVKG-MADRIIS 343 (420)
Q Consensus 299 ---------------------------------~~~~r~~~-s~pp~~ga~iv~~IL~dp~L~~~w~~el~~-m~~r~~~ 343 (420)
....+..+ .+++..+|.++..+|++.+ |.+.++. ++..|++
T Consensus 237 ~~~~vI~~~SfSK~~~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~ 312 (416)
T PRK09440 237 WNPNIILCMSLSKLGLPGVRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGD----LLRLSETVIRPFYRQ 312 (416)
T ss_pred ccCCeEEEecccccCCCcceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccch----HHHHHHHHHHHHHHH
Confidence 11112222 3568889999988888754 4444443 4678888
Q ss_pred HHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CHHHHHHHHHhCCeEEeCC-----------------CcEEEc
Q psy16707 344 MRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NATQVEKLIKEHSVYLTKD-----------------GRISMA 401 (420)
Q Consensus 344 ~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p~-----------------gRis~a 401 (420)
+|+.+.+.|++.-....+....+++|+|.|+.+ +++++...++++||.+.|+ -|||++
T Consensus 313 r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~ 392 (416)
T PRK09440 313 KVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV 392 (416)
T ss_pred HHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec
Confidence 888888888764111124445678899999743 3444433447899999873 199998
Q ss_pred ccCCCCHHHHHHHHHHHh
Q psy16707 402 GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 402 gl~~~ni~~la~AI~~vv 419 (420)
+ +.++++...++|.+++
T Consensus 393 ~-~~~~l~~~i~~l~~~~ 409 (416)
T PRK09440 393 Q-DDEEIEKGIAILAEEV 409 (416)
T ss_pred C-CHHHHHHHHHHHHHHH
Confidence 5 6777777777776654
No 70
>PLN02397 aspartate transaminase
Probab=99.66 E-value=8e-16 Score=159.50 Aligned_cols=125 Identities=60% Similarity=0.987 Sum_probs=118.8
Q ss_pred chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
++++++.+.+..++++|.+++.++..+|+++++.++|.++++.|+++++..|..|++.|++.+.++.|+++..|.|||.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~ 373 (423)
T PLN02397 294 VKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSF 373 (423)
T ss_pred HHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEe
Confidence 34567778888999999999999999999999999999999999999999999999999998877789999999999999
Q ss_pred cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
+.++.+++++|.+++|||++.+||||++|++.+|+++++++|++|
T Consensus 374 ~~l~~~~~~~Ll~~~~V~v~~~~Ri~~~~~~~~~i~~~~~~i~~~ 418 (423)
T PLN02397 374 TGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLADAIHAV 418 (423)
T ss_pred cCCCHHHHHHHHHhCCEEECCCCeEEEeeCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998
No 71
>PRK05839 hypothetical protein; Provisional
Probab=99.66 E-value=2e-14 Score=146.31 Aligned_cols=225 Identities=12% Similarity=0.104 Sum_probs=152.8
Q ss_pred HHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCC
Q psy16707 148 NLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDN 227 (420)
Q Consensus 148 ~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~ 227 (420)
..+....++..+.++|||++|. ++ +++++.++++...... ....|.+..|.++||+++++++-..++..++++
T Consensus 12 ~~~~~~~~~~~~~~~i~l~~~~---p~--~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~ 84 (374)
T PRK05839 12 RELLKEITPNKEYKGLDLTIGE---PQ--FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKEN 84 (374)
T ss_pred HHHHHHhhhcCCCCeEEcCCCC---CC--CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc
Confidence 3444444443455999999996 43 3456888887766542 467899999999999999999844333235566
Q ss_pred ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------
Q psy16707 228 LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------- 298 (420)
Q Consensus 228 ~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------- 298 (420)
+| +.|.|+++++.+++.++....+ ||.|++|+|+|+.|...++..|++
T Consensus 85 ~I----------------------~it~G~~~al~~~~~~~~~~~~-gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~ 141 (374)
T PRK05839 85 EL----------------------IPTFGTREVLFNFPQFVLFDKQ-NPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKE 141 (374)
T ss_pred eE----------------------EEecCcHHHHHHHHHHHhcCCC-CCEEEECCCCchhhHHHHHhcCCEEEEeecccc
Confidence 66 5699999999888765421125 899999999999999999988875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 142 ~~~~~d~~~~~~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~ 221 (374)
T PRK05839 142 NDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESF 221 (374)
T ss_pred cCCcCCcchhhhccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCcccc
Confidence
Q ss_pred ------------------------------hhh--hhhc-cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ------------------------------KIL--IRAF-YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMR 345 (420)
Q Consensus 299 ------------------------------~~~--~r~~-~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R 345 (420)
..+ .+.. -.+.|...|.++...|.+ . +.++.++++++++|
T Consensus 222 ~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~---~~~~~~~~~~~~~~ 294 (374)
T PRK05839 222 KNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD----D---EHAEFFRNIYAKNL 294 (374)
T ss_pred CcEEEEeccccccCCccceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc----c---hHHHHHHHHHHHHH
Confidence 000 0111 112344445444444433 2 34455668899999
Q ss_pred HHHHHHHHhcCCCCCCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCC----------C--cEEEcccCCCCHHHH
Q psy16707 346 QSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKD----------G--RISMAGVTSKNVGYL 411 (420)
Q Consensus 346 ~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~----------g--Ris~agl~~~ni~~l 411 (420)
+.+.+.| | +. .+++|+|.|+.++ .+++++|++++||.+.|+ + ||+++. +++.+...
T Consensus 295 ~~~~~~l---~----~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~ 364 (374)
T PRK05839 295 KLAREIL---G----IT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKA 364 (374)
T ss_pred HHHHHhc---C----CC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHH
Confidence 8887765 4 22 5688999998764 567788888899999984 2 999974 56666666
Q ss_pred HHHHHHHh
Q psy16707 412 AKAIHAVT 419 (420)
Q Consensus 412 a~AI~~vv 419 (420)
.+.|.+++
T Consensus 365 l~~l~~~l 372 (374)
T PRK05839 365 LEIIKTYL 372 (374)
T ss_pred HHHHHHHh
Confidence 66666543
No 72
>PLN02368 alanine transaminase
Probab=99.62 E-value=1.6e-14 Score=149.46 Aligned_cols=195 Identities=15% Similarity=0.132 Sum_probs=142.9
Q ss_pred CCCCceeecccccccCCCC------C----------------------CchHHHHHHHHHHHcc-CCCCCCCCCCCCHHH
Q psy16707 158 TNVNKINLGVGAYRDDQGK------P----------------------YVLPSVKQADEIVLNK-NLDKEYAPIIGAPDF 208 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~------~----------------------~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~f 208 (420)
.+.++|+|++|. ||.. + .+++.+++|...+..+ ...+.|++..|+++|
T Consensus 36 ~g~~vi~l~iG~---Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~L 112 (407)
T PLN02368 36 EGKKIIFTNVGN---PHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGV 112 (407)
T ss_pred HhhhhhcccCCC---hhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHH
Confidence 456999999996 6632 1 3678888887765322 246789999999999
Q ss_pred HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
|+++++++...++..+++++| +.|.|++.++.+++..+. ..| ||.|++|+|+|++|
T Consensus 113 R~aia~~~~~~~g~~~~~~~I----------------------~it~Ga~~al~~~~~~l~-~~p-Gd~Vli~~P~Y~~y 168 (407)
T PLN02368 113 RKEVAEFIERRDGYPSDPELI----------------------FLTDGASKGVMQILNAVI-RGE-KDGVLVPVPQYPLY 168 (407)
T ss_pred HHHHHHHHHHhcCCCCChhhE----------------------EEcccHHHHHHHHHHHHc-CCC-CCEEEEeCCCCccH
Confidence 999999995443333455655 669999999998876542 247 99999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
..+++.+|++
T Consensus 169 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~ 248 (407)
T PLN02368 169 SATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG 248 (407)
T ss_pred HHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 9988877654
Q ss_pred ------------------------------------------------------------------h--hhhhhccCCCc
Q psy16707 299 ------------------------------------------------------------------K--ILIRAFYSSPP 310 (420)
Q Consensus 299 ------------------------------------------------------------------~--~~~r~~~s~pp 310 (420)
. ........+++
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~ 328 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPN 328 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCC
Confidence 0 00011122456
Q ss_pred hHHHHHHHHHhCChhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEe--cCCCHHHHHH
Q psy16707 311 IHGARIVQEILGDPKL----KAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCY--TGLNATQVEK 383 (420)
Q Consensus 311 ~~ga~iv~~IL~dp~L----~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~--~~l~~~~v~~ 383 (420)
..+|.++..+|++++. ...|.++++.|++.|++||+.+++.|+++ | +...++++|||.| +.++...+++
T Consensus 329 ~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g----~~~~~P~Gafy~~~~i~lp~~~~~~ 404 (407)
T PLN02368 329 VSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKN----VVCNFTEGAMYSFPQIKLPPKAIEA 404 (407)
T ss_pred cHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC----eEeCCCCeeeEeccCCCCCHHHHHH
Confidence 6677777777765531 13467888889999999999999999987 5 6667788889989 4778877764
No 73
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.62 E-value=6.5e-14 Score=140.95 Aligned_cols=208 Identities=13% Similarity=0.151 Sum_probs=146.4
Q ss_pred ceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCC-ceeeecccCCCCc
Q psy16707 162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDN-LISIVQGISGTGS 240 (420)
Q Consensus 162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~-~i~~~~~~~~~~~ 240 (420)
++|++.|. ++ +++++.+.++..+... ....|.+..|.++||+++++++...++..++++ +|
T Consensus 2 ~~~~~~g~---p~--~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I----------- 63 (350)
T TIGR03537 2 LFDFGTGD---PK--EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQV----------- 63 (350)
T ss_pred eEeccCCC---CC--CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcE-----------
Confidence 58899995 43 5667888888877653 357899999999999999999854333334444 55
Q ss_pred cccccccccceeecccchHHHHHHHHHHHhcCCCC---CEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE---KVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g---d~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
+.|.|+++++.+++..+ +.| | |+|++|+|+|+.|...++..|++
T Consensus 64 -----------iit~Gs~~ai~~~~~~~--~~~-g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 129 (350)
T TIGR03537 64 -----------LPSAGSKEAIFHFPLVF--IDP-EEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKV 129 (350)
T ss_pred -----------EEcCChHHHHHHHHHHH--cCC-CCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHH
Confidence 56999999999988755 446 5 79999999999999999988775
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 130 ~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g 209 (350)
T TIGR03537 130 EKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSG 209 (350)
T ss_pred HHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccC
Confidence
Q ss_pred ------------------hhhhhhccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707 299 ------------------KILIRAFYS-SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK 359 (420)
Q Consensus 299 ------------------~~~~r~~~s-~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~ 359 (420)
....+..++ ++|...+.++...|.+ .+|. +..+.+++++|+.+.+.|++.|
T Consensus 210 ~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~---~~~r~~l~~~~~~~~~~l~~~g--- 279 (350)
T TIGR03537 210 MTGYRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSD----DNHV---LERRKIFKRKRDLFIEFFNKVG--- 279 (350)
T ss_pred CccccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCC----cHHH---HHHHHHHHHHHHHHHHHHHHCC---
Confidence 111122222 3344566655555553 2343 4456899999999999999876
Q ss_pred CCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 360 PWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 360 ~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~ 417 (420)
+...++++|+|.|+.+ +. +.++.|+ ++||++.|+ + |||++ .+. +.+.++|+.
T Consensus 280 -~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~-~~~---~~~~~~l~~ 346 (350)
T TIGR03537 280 -LEYLYPDATFYLWVKVPSGIDAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALV-PTL---EECEEALRL 346 (350)
T ss_pred -CcccCCCeEEEEEEECCCCCCHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEec-CCH---HHHHHHHHH
Confidence 5666778899998744 33 4556775 589999874 1 99987 343 455555543
No 74
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.60 E-value=1.1e-13 Score=140.05 Aligned_cols=214 Identities=13% Similarity=0.072 Sum_probs=151.2
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
..|||++|. + ..++++.+.++......+ .....|. ..|.++||+++++++....+..+++++|
T Consensus 27 ~~i~l~~~~---~--~~~~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I--------- 91 (368)
T PRK03317 27 VPVRLNTNE---N--PYPPSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENV--------- 91 (368)
T ss_pred ceeEecCCC---C--CCCCCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhE---------
Confidence 579999996 2 246777788777665432 1346784 5699999999999985543333556655
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|+.|...++..|.+
T Consensus 92 -------------~it~G~~~~l~~~~~~~--~~~-gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~ 155 (368)
T PRK03317 92 -------------WAANGSNEILQQLLQAF--GGP-GRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAA 155 (368)
T ss_pred -------------EECCCHHHHHHHHHHHh--cCC-CCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHH
Confidence 56999999999998765 457 999999999999999988877664
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 156 ~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl 235 (368)
T PRK03317 156 IAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGG 235 (368)
T ss_pred HhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchh
Confidence
Q ss_pred --------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy16707 299 --------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI 364 (420)
Q Consensus 299 --------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i 364 (420)
....+..| +++..++.++..+|.+. ..| .+.+++++++|+.+.+.|++.| +...
T Consensus 236 RiG~~~~~~~~~~~l~~~~~~~-~~s~~~~~a~~~~l~~~---~~~----~~~~~~~~~~~~~l~~~L~~~g----~~~~ 303 (368)
T PRK03317 236 RLGYLAAAPAVVDALRLVRLPY-HLSAVTQAAARAALRHA---DEL----LASVAALRAERDRVVAWLRELG----LRVA 303 (368)
T ss_pred hhhhhhCCHHHHHHHHhcCCCC-CCCHHHHHHHHHHhhCH---HHH----HHHHHHHHHHHHHHHHHHHHCC----CEeC
Confidence 11112233 34566777666667542 223 2334567888999999999877 5556
Q ss_pred CCCCceEEecCC-CHHHHHHHHHhCCeEEeCCC-----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 365 TDQIGMFCYTGL-NATQVEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 365 ~~q~GmF~~~~l-~~~~v~~Ll~e~~Vy~~p~g-----Ris~agl~~~ni~~la~AI~~vv 419 (420)
.++.|+|.|..+ +.+.+...+.++||++.+.+ ||+++ +.+.++.+.+++.+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~~ 362 (368)
T PRK03317 304 PSDANFVLFGRFADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEVL 362 (368)
T ss_pred CCCCcEEEEeccCCHHHHHHHHHHCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHHH
Confidence 677787777544 34444334467899998754 99987 4577899999998875
No 75
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.60 E-value=1.3e-13 Score=141.29 Aligned_cols=215 Identities=18% Similarity=0.210 Sum_probs=152.6
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~ 236 (420)
.++++||+.|. ++ +++++.|.++...+.++ .....|.+..|.+++|+++++++...+...+++++|
T Consensus 32 ~~~~~~l~~g~---p~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i------- 99 (394)
T PRK06836 32 ADNVFDFSLGN---PS--VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHI------- 99 (394)
T ss_pred CCCeEEecCcC---CC--CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcE-------
Confidence 35679999995 43 45678888887776543 125789999999999999999985544444556666
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|+.|..+++..|++
T Consensus 100 ---------------~~t~G~~~al~~~~~~l--~~~-gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l 161 (394)
T PRK06836 100 ---------------VMTCGAAGALNVALKAI--LNP-GDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDAL 161 (394)
T ss_pred ---------------EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHH
Confidence 56999999999888755 457 999999999999999998877664
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 162 ~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S 241 (394)
T PRK06836 162 EAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYS 241 (394)
T ss_pred HhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEec
Confidence
Q ss_pred ------------------hhh------h-------hh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ------------------KIL------I-------RA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQ 346 (420)
Q Consensus 299 ------------------~~~------~-------r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~ 346 (420)
..+ . +. .+.+++...|.+++.++.++. -+.+++++|+
T Consensus 242 ~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----------~~~~~~~~r~ 310 (394)
T PRK06836 242 FSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV-----------DVSIYKRNRD 310 (394)
T ss_pred chhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH-----------HHHHHHHHHH
Confidence 000 0 00 112344555555555555421 1356888999
Q ss_pred HHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHHHHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHH
Q psy16707 347 SLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 347 ~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI 415 (420)
.+.+.|++.| |....+++|||.|+.+ +...+...++++||.+.|+ + ||+++ .+++.++...+.|
T Consensus 311 ~l~~~L~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~~~i~~l 385 (394)
T PRK06836 311 LLYDGLTELG----FECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC-VDTETIERSLPAF 385 (394)
T ss_pred HHHHHHHhCC----CEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec-CCHHHHHHHHHHH
Confidence 9999999876 7777788899999754 3444434457899999997 2 99998 6777766655555
Q ss_pred HHHh
Q psy16707 416 HAVT 419 (420)
Q Consensus 416 ~~vv 419 (420)
.+++
T Consensus 386 ~~~l 389 (394)
T PRK06836 386 EKLA 389 (394)
T ss_pred HHHH
Confidence 5543
No 76
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.58 E-value=1.3e-13 Score=138.20 Aligned_cols=207 Identities=16% Similarity=0.207 Sum_probs=150.5
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.++|||+.|. + ..++++.++++......+ ....|.+. |.+++|+++++++ + +++++|
T Consensus 24 ~~~i~l~~~~---~--~~~~~~~~~~a~~~~~~~-~~~~y~~~-~~~~lr~aia~~~-~-----~~~~~I---------- 80 (353)
T PRK05387 24 AKLIKLNTNE---N--PYPPSPKVLEAIRAALGD-DLRLYPDP-NADALRQAIAAYY-G-----LDPEQV---------- 80 (353)
T ss_pred cceeeccCCC---C--CCCCCHHHHHHHHHHhhh-hhhcCCCC-cHHHHHHHHHHHh-C-----CCHHHE----------
Confidence 4689999997 2 244577888888766543 35678654 7799999999986 3 234445
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|++.++.+++..+ +.| ||.|++|+|+|++|...++..|++
T Consensus 81 ------------~it~G~~~al~~~~~~l--~~~-gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~ 145 (353)
T PRK05387 81 ------------FVGNGSDEVLAHAFLAF--FNH-DRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLRPN 145 (353)
T ss_pred ------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHhcC
Confidence 67999999999998755 457 999999999999999999888875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 146 ~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 225 (353)
T PRK05387 146 GGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH 225 (353)
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC
Confidence
Q ss_pred ----hhh--hhhcc--CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCce
Q psy16707 299 ----KIL--IRAFY--SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM 370 (420)
Q Consensus 299 ----~~~--~r~~~--s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~Gm 370 (420)
..+ .+..+ .+++..++.++..+|.+ .+| +++++++++++|+.+.+.|++.| |.. .++.|+
T Consensus 226 ~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~-~~~~~~ 293 (353)
T PRK05387 226 PELIEALNRVKNSFNSYPLDRLAQAGAIAAIED----EAY---FEETRAKVIATRERLVEELEALG----FEV-LPSKAN 293 (353)
T ss_pred HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----CeE-CCCcCc
Confidence 111 12211 23466777777776754 234 34566889999999999999886 543 456788
Q ss_pred EEecCC---CHH-HHHHHHHhCCeEEeCC--------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 371 FCYTGL---NAT-QVEKLIKEHSVYLTKD--------GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 371 F~~~~l---~~~-~v~~Ll~e~~Vy~~p~--------gRis~agl~~~ni~~la~AI~~vv 419 (420)
|.|+.+ +++ +++.| .++||++.+- -||+++ +.+.++++.++|++++
T Consensus 294 ~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 294 FVFARHPSHDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEIL 351 (353)
T ss_pred EEEEECCCCCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHh
Confidence 888754 344 45666 6889999431 199997 5688999999998875
No 77
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.55 E-value=2.8e-13 Score=144.08 Aligned_cols=105 Identities=10% Similarity=-0.012 Sum_probs=73.3
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC-Cc-cccCCceeeecccCCC
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED-CP-QLKDNLISIVQGISGT 238 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~-~~-~~~~~~i~~~~~~~~~ 238 (420)
+.|||++|. ++. ++++.|.++.+.+.. ..|++..|.++++++++..++... .. ...++.
T Consensus 95 ~~i~l~~g~---p~~--~~~~~~~~~~~~~~~----~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~---------- 155 (521)
T TIGR03801 95 DIISYVIDQ---LGF--DPDAFLYEMCDGIIG----DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGE---------- 155 (521)
T ss_pred HHHhhcCCC---CCC--CCCHHHHHHHHHhhc----CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCc----------
Confidence 468999997 544 456778777766542 259888888888888886664432 10 011110
Q ss_pred CccccccccccceeecccchHHHHHHHHHHH---hcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLK---NFFPGEKVIYVPTPTWGNHIPICKHT 295 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~---~~~p~gd~VlvpdP~w~ny~~i~~~a 295 (420)
.+|+.|.||++|+..++..|. .+.| ||+|++++|+|++|..+++..
T Consensus 156 ----------~~V~it~Gat~al~~~~~~l~~~~ll~p-GD~Vlv~~P~y~~y~~~~~l~ 204 (521)
T TIGR03801 156 ----------FDLFAVEGGTAAMCYIFDSLKANELLKK-GDKIALMTPIFTPYLEIPELP 204 (521)
T ss_pred ----------CeEEEeCCHHHHHHHHHHHHhHhhcCCC-CCEEEEeCCCcHHHHHHHHHh
Confidence 024779999999998776431 3567 999999999999999886654
No 78
>PRK09105 putative aminotransferase; Provisional
Probab=99.55 E-value=5.3e-13 Score=136.00 Aligned_cols=207 Identities=15% Similarity=0.175 Sum_probs=149.3
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
.++.|+|+.|. ...++++.|.++......+ ...|.+. +.++||+++++++ |. ++++|
T Consensus 42 ~~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~-~v-----~~e~I--------- 98 (370)
T PRK09105 42 AEGAVFLNANE-----CPLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE-GL-----PADHV--------- 98 (370)
T ss_pred CCCcEEecCCC-----CCCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh-Cc-----ChhhE---------
Confidence 36789999996 2245666777776654432 2458765 4999999999965 42 34555
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 99 -------------~it~Gs~~ai~~~~~~l--~~~-gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 162 (370)
T PRK09105 99 -------------MAYAGSSEPLNYAVLAF--TSP-TAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA 162 (370)
T ss_pred -------------EEcCChHHHHHHHHHHH--cCC-CCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc
Confidence 56999999999998765 447 999999999999999999988875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 163 ~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRi 242 (370)
T PRK09105 163 DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRL 242 (370)
T ss_pred CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccce
Confidence
Q ss_pred ----------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707 299 ----------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI 368 (420)
Q Consensus 299 ----------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~ 368 (420)
..+.+..+++++..++.++..+|.++ +|. +.++++++++|+.+.+.|++.| |...+++.
T Consensus 243 G~~v~~~~~i~~l~~~~~~~~~~~~~~aa~~~L~~~----~~~---~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~ 311 (370)
T PRK09105 243 GLAAARPDLLAKLARFGHNPLPVPAAAAGLASLRDP----KLV---PQRRAENAAVREDTIAWLKKKG----YKCTPSQA 311 (370)
T ss_pred eeeecCHHHHHHHHhcCCCCcCHHHHHHHHHHHhCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CCcCCCCC
Confidence 12222244557778888777777653 454 4445789999999999999887 66666666
Q ss_pred ceEEecCC--CH-HHHHHHHHhCCeEEeC------C-CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 369 GMFCYTGL--NA-TQVEKLIKEHSVYLTK------D-GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 369 GmF~~~~l--~~-~~v~~Ll~e~~Vy~~p------~-gRis~agl~~~ni~~la~AI~~vv 419 (420)
++| +..+ +. ++++.|+ ++||++.. + -||+++ ++++++++.+++++++
T Consensus 312 ~f~-~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 312 NCF-MVDVKRPAKAVADAMA-KQGVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKVM 368 (370)
T ss_pred cEE-EEeCCCCHHHHHHHHH-HCCcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHh
Confidence 655 4433 44 4556775 56999831 1 299988 4677999999998875
No 79
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=5.3e-13 Score=134.35 Aligned_cols=211 Identities=15% Similarity=0.112 Sum_probs=151.1
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
..++|+|++|. + .+++++.++++..........+.|.+ .|.++||+++++++ |.+ .++.|
T Consensus 25 ~~~~i~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~-~~~----~~~~I--------- 84 (356)
T PRK04870 25 ATGMVKLDAME---N--PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM-GVP----AGADV--------- 84 (356)
T ss_pred CCCceeCcCCC---C--CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh-CcC----CCCcE---------
Confidence 35899999996 2 35678888888776543334578877 68899999999987 432 11234
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||+|++++|+|+.|..+++..|++
T Consensus 85 -------------~~t~G~~~~i~~~~~~~--~~~-gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~ 148 (356)
T PRK04870 85 -------------LLGNGSDELIQLLALAC--AKP-GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAA 148 (356)
T ss_pred -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHH
Confidence 56888899999888755 457 999999999999999999988875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 149 ~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~GlRiG~ 228 (356)
T PRK04870 149 IAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSKLGLAGLRLGY 228 (356)
T ss_pred hhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchhhhhHHHhhhh
Confidence
Q ss_pred --------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707 299 --------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI 368 (420)
Q Consensus 299 --------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~ 368 (420)
..+ .+..| +.+..++.++..+|++ .+.++.++++++++|+.+.+.|+++. + |. +.++.
T Consensus 229 ~i~~~~~i~~~~~~~~~~-~~~~~~q~~a~~~l~~-------~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~-~~~~~ 296 (356)
T PRK04870 229 LAGHPAWIAELDKVRPPY-NVNVLTQATALFALEH-------VDVLDAQAAQLRAERTRLAAALAALP--G-VT-VFPSA 296 (356)
T ss_pred hhCCHHHHHHHHHccCCC-cCCHHHHHHHHHHHhC-------HHHHHHHHHHHHHHHHHHHHHHHhCC--C-cE-ECCCC
Confidence 000 11122 3455566655555543 13356677889999999999998862 2 53 34677
Q ss_pred ceEEecCCC-HHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 369 GMFCYTGLN-ATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 369 GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~vv 419 (420)
|+|.|+.++ .+.+..+++++||.+.|+. |||++ +.+..+.|.+|+.+++
T Consensus 297 ~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 297 ANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL 356 (356)
T ss_pred CeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence 889987764 4555555689999998741 99998 5688999999998863
No 80
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=1e-12 Score=132.42 Aligned_cols=204 Identities=15% Similarity=0.174 Sum_probs=144.4
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
..++|||++|. ++ ..+++.+.++...... ..+.|+ ..|.++||+++++++ + +++++|
T Consensus 29 ~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~--~~~~Y~-~~~~~~lr~~ia~~~-~-----~~~~~I--------- 85 (357)
T PRK14809 29 PDDLVKLSSNE---NP--HGPSPAAVEAIREAAE--RVHSYP-KASHADLTAALADRW-D-----VSPEQV--------- 85 (357)
T ss_pred ccceeEecCCC---CC--CCCCHHHHHHHHHHHh--hhhcCC-CCCHHHHHHHHHHHh-C-----CCcceE---------
Confidence 45799999996 22 3445566666655443 246785 479999999999987 3 335555
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|+.|....+..|+.
T Consensus 86 -------------~it~G~~~al~~~~~~~--~~~-gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 149 (357)
T PRK14809 86 -------------WLANGGDGALDYLARAM--LDP-GDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVL 149 (357)
T ss_pred -------------EECCCHHHHHHHHHHHh--cCC-CCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHH
Confidence 56999999999988755 457 999999999999888777665543
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 150 ~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 229 (357)
T PRK14809 150 DAYDGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGL 229 (357)
T ss_pred HhhcCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcch
Confidence
Q ss_pred ------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy16707 299 ------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI 364 (420)
Q Consensus 299 ------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i 364 (420)
..+ .+.. .+++..++.++..+|.+ .+| ++.+++.++++|+.+.+.|+..+ |
T Consensus 230 RiG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~l~~----~~~---~~~~~~~~~~~r~~l~~~L~~~~----~--- 294 (357)
T PRK14809 230 RLGYAVVPEEWADAYARVNTP-FAASELACRAGLAALDD----DEH---VERTVETARWAREYIREELDAPT----W--- 294 (357)
T ss_pred hheeeecCHHHHHHHHHhCCC-CCCCHHHHHHHHHHhCC----HHH---HHHHHHHHHHHHHHHHHHhcCcc----C---
Confidence 111 1222 34566777777777765 244 44455788899999999886532 2
Q ss_pred CCCCceEEecCCC--HHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 365 TDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 365 ~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
++.|+|.|+.++ .++++.| +++||.+.|+. ||+++ +.+.++...++|.++++
T Consensus 295 -~~~g~f~~~~~~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 295 -ESAGNFVLAEVGDASAVAEAA-QERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred -CCCCCEEEEECCCHHHHHHHH-HHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 478999998763 3455555 78899999862 99986 45788888888877653
No 81
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.53 E-value=9e-13 Score=133.17 Aligned_cols=206 Identities=16% Similarity=0.121 Sum_probs=150.0
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.|||++|. ++ ..+++.|.++...... ....|.+. |.++||+++++++ + +++++|
T Consensus 22 ~~~i~l~~~~----n~-~~~~~~~~~a~~~~~~--~~~~Y~~~-~~~~Lr~aia~~~-~-----v~~~~I---------- 77 (360)
T PRK07392 22 DAILDFSASI----NP-LGPPESVIAAIQSALS--ALRHYPDP-DYRELRLALAQHH-Q-----LPPEWI---------- 77 (360)
T ss_pred ccEEEeCCcC----CC-CCCCHHHHHHHHHHHH--HhhcCCCc-CHHHHHHHHHHHh-C-----cChhhE----------
Confidence 4679999996 22 4566777777665543 25679875 5689999999988 3 335555
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|+++++.+++..+ .+ ||.|++++|+|+.|...++..|++
T Consensus 78 ------------~it~G~~~~i~~~~~~l---~~-g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 141 (360)
T PRK07392 78 ------------LPGNGAAELLTWAGREL---AQ-LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQT 141 (360)
T ss_pred ------------EECCCHHHHHHHHHHHh---CC-CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHH
Confidence 56999999999887644 36 789999999999999999887664
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 142 ~~~~~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~ 221 (360)
T PRK07392 142 LPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLP 221 (360)
T ss_pred HHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCC
Confidence
Q ss_pred --------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q psy16707 299 --------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN 362 (420)
Q Consensus 299 --------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~ 362 (420)
..+ .+.. .+++...|.++..+|.+ .+|.+++. ++++++|+.+.+.|++++. |.
T Consensus 222 GlRiG~~v~~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~----~~~~~~~~---~~~~~~r~~l~~~L~~~~~---~~ 290 (360)
T PRK07392 222 GLRLGYAIAHPDRLQRWQQWRDP-WPVNGLAAAAAIAALAD----RDFQQQTW---AWLPPAREALFQGLASLPG---LT 290 (360)
T ss_pred chheeeeeCCHHHHHHHHhhCCC-CCCCHHHHHHHHHHhcc----HHHHHHHH---HHHHHHHHHHHHHHHhCCC---cE
Confidence 111 1222 34577888888888875 35665554 6788999999999987621 55
Q ss_pred ccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 363 HITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 363 ~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
. .++.|+|.|+.++ .+.+++|++++||.+.|+ + ||+++. .+..+.|.+++.+++
T Consensus 291 ~-~~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~ 357 (360)
T PRK07392 291 P-LPSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAIL 357 (360)
T ss_pred E-CCCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 4 3478999997653 345578888999999885 1 999884 344679999988865
No 82
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.52 E-value=1.3e-12 Score=133.08 Aligned_cols=206 Identities=12% Similarity=0.064 Sum_probs=149.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
..++|+|+.|+ ...++++.|.++......+ ...| |..|.++||+++++++ | +++++|
T Consensus 28 ~~~~i~l~~ne-----n~~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~-~-----~~~~~I--------- 84 (366)
T PRK01533 28 DHSFVKLASNE-----NPFGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL-H-----VKMEQV--------- 84 (366)
T ss_pred CCceEEeCCCC-----CCCCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh-C-----CCcceE---------
Confidence 45789999996 2245677777776654332 2335 7789999999999986 3 235555
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 85 -------------~vt~Gs~e~i~~~~~~l--~~~-gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~ 148 (366)
T PRK01533 85 -------------LCGSGLDEVIQIISRAV--LKA-GDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVV 148 (366)
T ss_pred -------------EECCCHHHHHHHHHHHh--cCC-CCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHh
Confidence 56999999999988755 447 999999999999999999988875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 149 ~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G 228 (366)
T PRK01533 149 DNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLAS 228 (366)
T ss_pred CcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChH
Confidence
Q ss_pred ---------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707 299 ---------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH 363 (420)
Q Consensus 299 ---------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~ 363 (420)
....+.. .+++..+|.++..+|.+ .+|.+++. +.++++|+.+.+.|++.| +.+
T Consensus 229 lRiG~~i~~~~~~~~l~~~~~~-~~~~~~~q~aa~~~l~~----~~~~~~~~---~~~~~~r~~~~~~l~~~g----~~~ 296 (366)
T PRK01533 229 FRVGYAVGHEELIEKLNVVRLP-FNVSSLAQKAATIAFGD----DEFIEEIV---RVNTEGLRQYESFCKENE----IPF 296 (366)
T ss_pred HHHhHHhCCHHHHHHHHHhcCC-CCcCHHHHHHHHHHhCC----HHHHHHHH---HHHHHHHHHHHHHHHhCC----Ccc
Confidence 1112333 35688888888888875 56766665 556666777777787777 444
Q ss_pred cCCCCceEEecCC-CHHHH-HHHHHhCCeEEeCC---CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 364 ITDQIGMFCYTGL-NATQV-EKLIKEHSVYLTKD---GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 364 i~~q~GmF~~~~l-~~~~v-~~Ll~e~~Vy~~p~---gRis~agl~~~ni~~la~AI~~vv 419 (420)
.+ +.|.|.|+.+ +.+.+ +.| .++||.+.+- -||+++ +.+..+.|.+|+.+++
T Consensus 297 ~~-~~~nf~~~~~~~~~~~~~~l-~~~GI~Vr~~~~~iRis~~--~~~~~~~l~~al~~~~ 353 (366)
T PRK01533 297 YQ-SQTNFIFLPVENGGEIYEAC-AHAGFIIRPFPNGVRITVG--TREQNEGVISVLQQHF 353 (366)
T ss_pred CC-CcCcEEEEeCCCHHHHHHHH-HHCCcEEccCCCceEEeCC--CHHHHHHHHHHHHHHH
Confidence 44 4688998876 34444 555 5899999652 399987 4578889999998875
No 83
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.52 E-value=1.5e-12 Score=131.11 Aligned_cols=203 Identities=15% Similarity=0.143 Sum_probs=150.3
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS 240 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 240 (420)
++|||+.|.+ + ..+++.|++|.....+ ...|.|..|.++||+++++++ +. ++++|
T Consensus 30 ~~i~l~~n~~--~---~~~~~~v~~a~~~~~~---~~~~~p~~g~~~lr~~ia~~~-~~-----~~~~i----------- 84 (359)
T PRK03158 30 KIVKLASNEN--P---YGPSPKVKEAIAAHLD---ELALYPDGYAPELRTKVAKHL-GV-----DEEQL----------- 84 (359)
T ss_pred ceEEecCCCC--C---CCCCHHHHHHHHHHHH---HhhcCCCCcHHHHHHHHHHHh-CC-----CHHHE-----------
Confidence 7899999972 2 3356778888776543 246778889999999999987 32 24455
Q ss_pred cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------------
Q psy16707 241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------- 298 (420)
Q Consensus 241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|+.|...+...|.+
T Consensus 85 -----------~~t~G~~~~l~~~~~~~--~~~-gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~ 150 (359)
T PRK03158 85 -----------LFGAGLDEVIQMISRAL--LNP-GTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDE 150 (359)
T ss_pred -----------EECCCHHHHHHHHHHHH--hCC-CCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCC
Confidence 56999999999887655 347 899999999999999888877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 151 ~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlR 230 (359)
T PRK03158 151 QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALR 230 (359)
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchh
Confidence
Q ss_pred -------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC
Q psy16707 299 -------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT 365 (420)
Q Consensus 299 -------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~ 365 (420)
....+..| +++..++.++..+|++ .+|.+++ ++.++++|+.+.+.|++.| +...
T Consensus 231 iG~~v~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~----~~~~~~~---~~~~~~~~~~~~~~l~~~~----~~~~- 297 (359)
T PRK03158 231 VGYGIASEELIEKLNIARPPF-NTTRIAQYAAIAALED----QAFLKEC---VEKNAEGLEQYYAFCKEYG----LFYY- 297 (359)
T ss_pred hehhcCCHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcC----HHHHHHH---HHHHHHHHHHHHHHHHHCC----CeeC-
Confidence 11113333 4577788888887865 3565444 4678888999999998876 4443
Q ss_pred CCCceEEecCC--CH-HHHHHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707 366 DQIGMFCYTGL--NA-TQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 366 ~q~GmF~~~~l--~~-~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI~~v 418 (420)
+..|+|.|+.+ ++ +.++.|+ ++||.+.|+ + ||+++ +.+.++.+.++|+++
T Consensus 298 ~~~g~~i~~~~~~~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 298 PSQTNFIFVDTGRDANELFEALL-KKGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred CCcCcEEEEECCCCHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 56789999755 33 4556665 689999995 1 99987 678899999999886
No 84
>PRK07908 hypothetical protein; Provisional
Probab=99.51 E-value=4.7e-12 Score=127.29 Aligned_cols=209 Identities=13% Similarity=0.145 Sum_probs=151.3
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
..++.+||++|. + .+.+++.|+++......+ ...|.+..|.+++|+++++++ | +++++|
T Consensus 20 ~~~~~~~l~~~~---~--~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~-~-----~~~~~I-------- 78 (349)
T PRK07908 20 AGPGLLDFAVNV---R--HDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH-G-----RTPDEV-------- 78 (349)
T ss_pred CCCCeEEecCCC---C--CCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh-C-----cChhhE--------
Confidence 357899999996 2 245677777777765532 467999999999999999986 3 235555
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
+.|.|++.++.+++. +.| +.+++++|+|+.|...++..|++
T Consensus 79 --------------~it~Ga~~al~~~~~----l~~--~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l~~ 138 (349)
T PRK07908 79 --------------LLLAGAAEGFALLAR----LRP--RRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAVPD 138 (349)
T ss_pred --------------EECCCHHHHHHHHHh----cCC--CeEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHhcc
Confidence 569999999998876 335 45678999999999988887765
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 139 ~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~ 218 (349)
T PRK07908 139 DADLVVIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALG 218 (349)
T ss_pred CCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeec
Confidence
Q ss_pred -----hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE
Q psy16707 299 -----KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF 371 (420)
Q Consensus 299 -----~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF 371 (420)
..+ .+..|+ .....+.++..++.+ ...++++.++++++++|+.+.+.|++.| |....++.|+|
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~~ 288 (349)
T PRK07908 219 APDVLARLTRGRAHWP-VGTLQLEAIAACCAP-----RAVAEAAADAARLAADRAEMVAGLRAVG----ARVVDPAAAPF 288 (349)
T ss_pred CHHHHHHHHhcCCCCC-ccHHHHHHHHHHhcc-----cchHHHHHHHHHHHHHHHHHHHHHHhCC----cEeccCCCceE
Confidence 101 011222 122233333333332 1224567778999999999999999875 66677789999
Q ss_pred EecCCC-HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 372 CYTGLN-ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 372 ~~~~l~-~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
.|+.++ .+++..+++++||.+.|+ + |||++ +.+.++++.+++++++
T Consensus 289 ~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 289 VLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEIL 345 (349)
T ss_pred EEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHH
Confidence 998775 456666668999999874 1 99995 6789999999999875
No 85
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.49 E-value=3.4e-12 Score=130.46 Aligned_cols=205 Identities=16% Similarity=0.169 Sum_probs=147.1
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
..+.|||+.|. ++ ..+++.|.++..... ..+.|+ ..|.++||+++++++ | +++++|
T Consensus 51 ~~~~i~l~~n~--~p---~~~~~~v~~a~~~~~---~~~~Yp-~~~~~~lr~~ia~~~-~-----~~~~~I--------- 106 (380)
T PLN03026 51 PEDIVKLDANE--NP---YGPPPEVLEALGNMK---FPYVYP-DPESRRLRAALAEDS-G-----LESENI--------- 106 (380)
T ss_pred ccceEEccCCC--CC---CCCCHHHHHHHHhhH---hhccCC-CCCHHHHHHHHHHHh-C-----cChhhE---------
Confidence 46889999996 12 334555777654421 235575 458999999999976 3 234555
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 107 -------------~~t~Ga~~~i~~~~~~~--~~~-gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 170 (380)
T PLN03026 107 -------------LVGCGADELIDLLMRCV--LDP-GDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEA 170 (380)
T ss_pred -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHH
Confidence 56999999999888654 457 999999999999999888877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 171 ~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiG 250 (380)
T PLN03026 171 VETHKPKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVG 250 (380)
T ss_pred HhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccce
Confidence
Q ss_pred ---------h--hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC
Q psy16707 299 ---------K--ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ 367 (420)
Q Consensus 299 ---------~--~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q 367 (420)
. ...+..| +.+..++.++..+|.+ .+| ++.++..++++|+.+.+.|++++ +..+.++
T Consensus 251 y~~~~~~~i~~l~~~~~~~-~~~~~~q~aa~~aL~~----~~~---~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~ 318 (380)
T PLN03026 251 YGAFPLSIIEYLWRAKQPY-NVSVAAEVAACAALSN----PKY---LEDVKNALVEERERLFGLLKEVP----FLEPYPS 318 (380)
T ss_pred eeecCHHHHHHHHHhcCCC-CCCHHHHHHHHHHhhC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----CCeECCC
Confidence 1 1112333 4577778777777765 245 44566889999999999999876 3334677
Q ss_pred CceEEecCCC----H-HHHHHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707 368 IGMFCYTGLN----A-TQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 368 ~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI~~v 418 (420)
.|+|.|+.++ . ++.++|+ ++||.+.++ + ||+++ +.+..+.+.++++++
T Consensus 319 ~~~f~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 319 DANFILCRVTSGRDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred CCeEEEEECCCCCCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 8999987543 3 4556665 899999764 1 99988 456789999999764
No 86
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.46 E-value=8e-12 Score=122.83 Aligned_cols=215 Identities=20% Similarity=0.227 Sum_probs=156.0
Q ss_pred eeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccc
Q psy16707 163 INLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLR 242 (420)
Q Consensus 163 InL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 242 (420)
|||+.|.| .+.+.+.+.++............|.+..|..++++++++++....+....+..
T Consensus 1 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~-------------- 61 (350)
T cd00609 1 IDLSIGEP-----DFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEE-------------- 61 (350)
T ss_pred CCCCCCCC-----CCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcce--------------
Confidence 68899975 23444444444443222345678999999999999999998554321111222
Q ss_pred cccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------------
Q psy16707 243 VGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------------ 298 (420)
Q Consensus 243 ~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------------ 298 (420)
++.+.|||+++..++..+. .+ ||+|++++|+|++|..+++..|++
T Consensus 62 --------~~~~~~~t~a~~~~~~~~~--~~-g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 130 (350)
T cd00609 62 --------IVVTNGAQEALSLLLRALL--NP-GDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT 130 (350)
T ss_pred --------EEEecCcHHHHHHHHHHhC--CC-CCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC
Confidence 3679999999998887663 36 899999999999999999888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 131 ~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g 210 (350)
T cd00609 131 PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPG 210 (350)
T ss_pred ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcc
Confidence
Q ss_pred -----------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy16707 299 -----------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPW 361 (420)
Q Consensus 299 -----------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w 361 (420)
....+..+++++.+++..+..+|..-. ++.+.+++++.++++.+.+.|++.+..
T Consensus 211 ~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~--- 281 (350)
T cd00609 211 LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALKELGPL--- 281 (350)
T ss_pred cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHhcCCc---
Confidence 111233446778888887776665421 456667789999999999999988732
Q ss_pred cccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC------C----cEEEcccCCCCHHHHHHHHHH
Q psy16707 362 NHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD------G----RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 362 ~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~------g----Ris~agl~~~ni~~la~AI~~ 417 (420)
....+..|+|.|+.++ .+++.++++++||++.++ + ||+++.. .++++++.++|++
T Consensus 282 ~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~~ 350 (350)
T cd00609 282 VVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLAE 350 (350)
T ss_pred cccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhhC
Confidence 2246678999987554 456788889999999875 2 9999977 8899999998863
No 87
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.46 E-value=6.4e-13 Score=136.63 Aligned_cols=123 Identities=56% Similarity=0.942 Sum_probs=115.1
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
++++.+.+..|+++|.....++..+|+++++.++|.++++.|+++++..|..+++.|++.+.++.|.++..|.|||.+..
T Consensus 278 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~ 357 (404)
T PTZ00376 278 SQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTG 357 (404)
T ss_pred HHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecC
Confidence 45555678899999999999999999999999999999999999999999999999999877777988889999999999
Q ss_pred CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
++.+++++|.++++|++++.|||++++++++++++++++|+++
T Consensus 358 ~~~~~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~~~l~~~ 400 (404)
T PTZ00376 358 LTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDV 400 (404)
T ss_pred CCHHHHHHHHHhCCEeecCCCeEEEeccCHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987
No 88
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=9.1e-12 Score=126.74 Aligned_cols=215 Identities=16% Similarity=0.180 Sum_probs=143.0
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCC-CCCCCCCCCCHHHHHHHHHHHcCCC--CccccCCceeeecccC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL-DKEYAPIIGAPDFGKLAAQLAYGED--CPQLKDNLISIVQGIS 236 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~-~~~Y~p~~G~~~fr~a~~~~~~g~~--~~~~~~~~i~~~~~~~ 236 (420)
+..++|+.|. + ..++++.+.++......+.. ...|. ..|.++||+++++++.... +..+++++|
T Consensus 28 ~~~~~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I------- 94 (374)
T PRK02610 28 IQLDRLDTNE---F--PYDLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANI------- 94 (374)
T ss_pred cceeEecCCC---C--CCCCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHE-------
Confidence 4679999997 3 24567778777766544321 35784 5799999999999885332 122455555
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC-EEEEcCCCCCCcHHHHhhcCcc-----------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK-VIYVPTPTWGNHIPICKHTGLE----------------- 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd-~VlvpdP~w~ny~~i~~~aG~~----------------- 298 (420)
+.|.|+++++..++..+ +.+ || .|++++|+|+.|..+++..|++
T Consensus 95 ---------------~it~Ga~~al~~~~~~~--~~~-g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 156 (374)
T PRK02610 95 ---------------SVGNGSDELIRSLLIAT--CLG-GEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAA 156 (374)
T ss_pred ---------------EEcCChHHHHHHHHHHH--cCC-CCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHH
Confidence 66999999998665433 446 65 8999999999999998877654
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 157 l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~ 236 (374)
T PRK02610 157 AQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAF 236 (374)
T ss_pred HHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhc
Confidence
Q ss_pred -----------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707 299 -----------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK 359 (420)
Q Consensus 299 -----------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~ 359 (420)
..+ .+.. .+.+...|.++..+|.+. +.|.+.++ ..+++ |+.+.+.|++++ +
T Consensus 237 g~~GlRiG~~v~~~~l~~~l~~~~~~-~~~~~~~q~a~~~~l~~~---~~~~~~~~---~~~~~-r~~l~~~L~~~~--~ 306 (374)
T PRK02610 237 RLAAHRVGYAIGHPELIAVLEKVRLP-YNLPSFSQLAAQLALEHR---QELLAAIP---EILQE-RDRLYQALQELP--Q 306 (374)
T ss_pred cCcccceeeeecCHHHHHHHHHhcCC-CCCCHHHHHHHHHHhcCH---HHHHHHHH---HHHHH-HHHHHHHHHhCC--C
Confidence 111 1222 345777888777777653 34444333 44444 777888898762 2
Q ss_pred CCcccCCCCceEEecCC----CHHHHHHHHHhCCeEEeCC-C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 360 PWNHITDQIGMFCYTGL----NATQVEKLIKEHSVYLTKD-G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 360 ~w~~i~~q~GmF~~~~l----~~~~v~~Ll~e~~Vy~~p~-g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
|. +.++.|+|.|+.+ +.+.+...++++||.+.+. + ||+++. .+.++...++|.+++
T Consensus 307 -~~-~~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~l 369 (374)
T PRK02610 307 -LR-VWPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAAL 369 (374)
T ss_pred -cE-eCCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHHH
Confidence 54 3578899999754 3344433347899999763 2 999884 344577777776654
No 89
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.45 E-value=7.2e-13 Score=135.65 Aligned_cols=123 Identities=44% Similarity=0.758 Sum_probs=114.7
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
.+++...|..|++||.....+++.+|+++++...|.+.++.|++++++.|..|++.|++.+.++.|.+...|.|||.++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~ 352 (396)
T PRK09257 273 SQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSG 352 (396)
T ss_pred HHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecC
Confidence 45556678899999999999999999999999999999999999999999999999999876667888889999999999
Q ss_pred CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
|+.+++++|.++++||+.++|||+++++++++|++.++.|++|
T Consensus 353 l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 353 LTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAV 395 (396)
T ss_pred CCHHHHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999876
No 90
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.45 E-value=7.3e-12 Score=127.34 Aligned_cols=206 Identities=15% Similarity=0.119 Sum_probs=148.9
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...++|++|+ + ...+++.+.+|...... ....|.+. +.++||+++++++ + ++++.|
T Consensus 31 ~~~~~~l~~~~---~--~~~~~~~~~~a~~~~~~--~~~~Y~~~-~~~~Lr~~ia~~~-~-----~~~~~I--------- 87 (369)
T PRK08153 31 RPFRARIGANE---S--GFGPSPSVIAAMREAAA--EIWKYGDP-ENHDLRHALAAHH-G-----VAPENI--------- 87 (369)
T ss_pred CcceeEecCCC---C--CCCCCHHHHHHHHHHHH--HhhcCCCC-ccHHHHHHHHHHh-C-----CCHHHE---------
Confidence 34457999996 2 24666777777665432 24678876 5899999999986 3 234445
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.++..++ +.| ||.|++++|+||.|...++..|++
T Consensus 88 -------------~it~G~~~~l~~~~~~~--~~~-gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~ 151 (369)
T PRK08153 88 -------------MVGEGIDGLLGLIVRLY--VEP-GDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAA 151 (369)
T ss_pred -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHh
Confidence 66999999999988755 447 999999999999999888877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 152 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlR 231 (369)
T PRK08153 152 RRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGAR 231 (369)
T ss_pred cccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchh
Confidence
Q ss_pred -------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC
Q psy16707 299 -------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT 365 (420)
Q Consensus 299 -------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~ 365 (420)
....+..+ +++...+.++..+|.+ .+|.+ .++++++++|+.+.+.|++.| |. ..
T Consensus 232 iG~~v~~~~~~~~l~~~~~~~-~~s~~~q~~~~~~l~~----~~~~~---~~~~~~~~~r~~~~~~L~~~g----~~-~~ 298 (369)
T PRK08153 232 VGYAIGAPGTIKAFDKVRNHF-GMNRIAQAAALAALKD----QAYLA---EVVGKIAAARDRIAAIARANG----LT-PL 298 (369)
T ss_pred eeeeecCHHHHHHHHHhhcCC-CCCHHHHHHHHHHhcC----HHHHH---HHHHHHHHHHHHHHHHHHHCC----Cc-cC
Confidence 11123333 4677788888887865 35644 455889999999999999877 44 33
Q ss_pred CCCceEEecCCC-----HHHH-HHHHHhCCeEE-eCC-----C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 366 DQIGMFCYTGLN-----ATQV-EKLIKEHSVYL-TKD-----G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 366 ~q~GmF~~~~l~-----~~~v-~~Ll~e~~Vy~-~p~-----g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+..|+|.|+.++ .+++ ++| .++||++ .|+ + ||+++ +++.++++.+++.+++
T Consensus 299 p~~~~f~~~~~~~~~~~a~~l~~~l-~~~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~ 363 (369)
T PRK08153 299 PSATNFVAIDCGRDGAFARAVLDGL-IARDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEAL 363 (369)
T ss_pred CCcCcEEEEECCCCcccHHHHHHHH-HHCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHH
Confidence 578899987552 2233 444 3689999 453 1 89987 6899999999999875
No 91
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.45 E-value=9.8e-12 Score=125.01 Aligned_cols=206 Identities=12% Similarity=0.118 Sum_probs=143.2
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+.++|+|++|+ + ..++++.+.++..........+.|.+. |.++||+++++++.... +++++|
T Consensus 18 ~~~~i~l~~~~---~--~~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i--------- 79 (335)
T PRK14808 18 KRDRTYLALNE---N--PFPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNV--------- 79 (335)
T ss_pred CCceeEecCCC---C--CCCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceE---------
Confidence 35889999996 3 245666676665554332223447655 99999999999884322 345555
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|++.++.+++..+ |.|++++|+|+.|..+++.+|++
T Consensus 80 -------------~it~Ga~~~i~~~~~~~-------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 139 (335)
T PRK14808 80 -------------SVGNGADEIIYVMMLMF-------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEG 139 (335)
T ss_pred -------------EEcCCHHHHHHHHHHHh-------CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHccCC
Confidence 56999999999987633 57999999999999999999886
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 140 ~~i~i~nP~NPTG~~~s~~~l~~l~~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~ 219 (335)
T PRK14808 140 DVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEK 219 (335)
T ss_pred CEEEEeCCCCCCCCCcCHHHHHHHHhcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHH
Confidence
Q ss_pred --hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec
Q psy16707 299 --KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 374 (420)
Q Consensus 299 --~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~ 374 (420)
..+ .+. ..+++..++.++..+|++. +|. ++..+.+.++|+.+.+.|++.| |...+ ..|.|.|+
T Consensus 220 ~~~~l~~~~~-~~~~~~~~q~a~~~~l~~~----~~~---~~~~~~~~~~r~~l~~~L~~~g----~~~~~-~~g~f~~~ 286 (335)
T PRK14808 220 FIDAYNRVRL-PFNVSYVSQMFAKVALDHR----EIF---EERTKFIVEERERMKSALREMG----YRITD-SRGNFVFI 286 (335)
T ss_pred HHHHHHHhcC-CCCCCHHHHHHHHHHHhCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CEECC-CCCeEEEE
Confidence 111 222 2445667777766666542 233 3334677788999999999876 55444 46778886
Q ss_pred CC---CHHHHHHHHHhCCeEEeC---CCcEEEcccCCCCHHHHHHHHHH
Q psy16707 375 GL---NATQVEKLIKEHSVYLTK---DGRISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 375 ~l---~~~~v~~Ll~e~~Vy~~p---~gRis~agl~~~ni~~la~AI~~ 417 (420)
.+ +.+++...+.++||++.. .-|||++. .+..+++.+++.+
T Consensus 287 ~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi~~--~~~~~~~~~~l~~ 333 (335)
T PRK14808 287 FMEKEEKERLLEHLRAKNIAVRSFREGVRITIGK--REENDMILKELEV 333 (335)
T ss_pred eCCCccHHHHHHHHHHCCeEEEECCCCeEEecCC--HHHHHHHHHHHHh
Confidence 44 345555555789999974 24999874 4778899999875
No 92
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.43 E-value=1.2e-11 Score=124.74 Aligned_cols=210 Identities=15% Similarity=0.106 Sum_probs=146.7
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
.+..++|+.|. + ..++++.|.+|............|.+. +.++||+++++++ + +++++|
T Consensus 21 ~~~~~~l~~~~---~--~~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~-~-----~~~~~i--------- 79 (351)
T PRK14807 21 IPYKYKMDANE---T--PFELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC-S-----VVPTNI--------- 79 (351)
T ss_pred CCceeEccCCC---C--CCCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh-C-----CCcccE---------
Confidence 34668999997 3 456777888777665443345678764 5799999999986 3 234555
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.+++..+ +.| ||.|++++|+|++|...++..|++
T Consensus 80 -------------~it~G~~~~l~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 143 (351)
T PRK14807 80 -------------FVGNGSDEIIHLIMLAF--INK-GDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKV 143 (351)
T ss_pred -------------EEecCHHHHHHHHHHHh--cCC-CCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHH
Confidence 56999999999988755 457 999999999999999988888765
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 144 ~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG 223 (351)
T PRK14807 144 IEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVG 223 (351)
T ss_pred hhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhcee
Confidence
Q ss_pred ---------hhhhh-hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707 299 ---------KILIR-AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI 368 (420)
Q Consensus 299 ---------~~~~r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~ 368 (420)
..+.+ ....+++...|.++..+|.++ .| ++..+.++++|+.+.+.|++.. + |.. .+++
T Consensus 224 ~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~----~~~~~~~~~~r~~l~~~l~~~~--g-~~~-~~~~ 291 (351)
T PRK14807 224 YAVANENILKYLNLVKSPYNINSLSQVIALKVLRTG----VL----KERVNYILNERERLIKELSKIP--G-IKV-YPSK 291 (351)
T ss_pred eeecCHHHHHHHHHccCCCCcCHHHHHHHHHHHhHH----HH----HHHHHHHHHHHHHHHHHHHhCC--C-cEE-CcCC
Confidence 11111 113345677787777767531 22 2333567788889999997652 2 654 4567
Q ss_pred ceEEecCCC-HHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 369 GMFCYTGLN-ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 369 GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
|+|.|+.++ ++.+..++.++||.+.+. + ||+++ +.+..+++.++|++++
T Consensus 292 ~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 292 TNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS--SCEANDYLINGLKELL 350 (351)
T ss_pred ccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC--CHHHHHHHHHHHHHhh
Confidence 899997764 455544556789999652 1 99997 4566889999998864
No 93
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.43 E-value=6.9e-12 Score=125.38 Aligned_cols=201 Identities=19% Similarity=0.191 Sum_probs=139.7
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.++|||++|.+ + .++++.|.+|..+... ..+.|.+..| ++||+++++++ +. ++++|
T Consensus 19 ~~~i~l~~~~~----~-~~~~~~~~~a~~~~~~--~~~~y~~~~~-~~lr~~ia~~~-~~-----~~~~i---------- 74 (346)
T TIGR01141 19 KEVIKLNSNEN----P-FGPPPKAKEALRAEAD--KLHRYPDPDP-AELKQALADYY-GV-----DPEQI---------- 74 (346)
T ss_pred CceEEccCCCC----C-CCCCHHHHHHHHHhHH--HhhcCCCCCH-HHHHHHHHHHh-Cc-----ChHHE----------
Confidence 47999999973 2 4456667777666543 3478987777 99999999976 31 23444
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|+++++..++..+ +.+ ||+|++++|+|+.|..+++..|++
T Consensus 75 ------------~~~~G~~~~l~~~~~~l--~~~-gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~ 139 (346)
T TIGR01141 75 ------------LLGNGSDEIIELLIRAF--LEP-GDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAI 139 (346)
T ss_pred ------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhc
Confidence 56899999998776644 457 899999999999999888877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 140 ~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~ 219 (346)
T TIGR01141 140 DDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRI 219 (346)
T ss_pred CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhc
Confidence
Q ss_pred ------hhh------hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC
Q psy16707 299 ------KIL------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT 365 (420)
Q Consensus 299 ------~~~------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~ 365 (420)
..+ .+..| +.+.+++.++..+|.+. . .++.++++++++|+.+.+.|+++ | |. +.
T Consensus 220 G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~----~---~~~~~~~~~~~~~~~l~~~L~~~~g----~~-~~ 286 (346)
T TIGR01141 220 GYAIANAEIIDALNKVRAPF-NLSRLAQAAAIAALRDD----D---FIEKTVEEINAERERLYDGLKKLPG----LE-VY 286 (346)
T ss_pred eeeecCHHHHHHHHhccCCC-CCCHHHHHHHHHHhCCH----H---HHHHHHHHHHHHHHHHHHHHHhcCC----CE-EC
Confidence 000 01122 23445555555555542 1 35566788999999999999886 4 55 34
Q ss_pred CCCceEEecCCC--HHHH-HHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHH
Q psy16707 366 DQIGMFCYTGLN--ATQV-EKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 366 ~q~GmF~~~~l~--~~~v-~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI 415 (420)
++.|+|.|+.++ .+++ ++| .++||++.|+ + |||++ +++.++.++++|
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l 345 (346)
T TIGR01141 287 PSDANFVLIRFPRDADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG--TREENDRFLAAL 345 (346)
T ss_pred CCcCCEEEEecCCCHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHh
Confidence 557888887553 4444 555 5789999874 2 89987 667788888775
No 94
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.42 E-value=1.7e-11 Score=124.49 Aligned_cols=206 Identities=17% Similarity=0.168 Sum_probs=148.0
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
.+++|||+.|. ++. .+++.++++...... ....|.+..| .+||+++++++ |. ++++|
T Consensus 35 ~~~~i~l~~~~--~~~---~~~~~~~~al~~~~~--~~~~Y~~~~g-~~lr~~ia~~~-~~-----~~~~i--------- 91 (371)
T PRK05166 35 VPRIAKLGSNE--NPL---GPSPAVRRAFADIAE--LLRLYPDPQG-RALREAIAART-GV-----PADRI--------- 91 (371)
T ss_pred CcceEEcCCCC--CCC---CCCHHHHHHHHHHHH--HhhcCCCCcH-HHHHHHHHHHh-Cc-----CHHHE---------
Confidence 45789999996 222 356677777766543 3567999999 59999999976 32 24455
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|++.++.+.+..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 92 -------------~~t~G~~~~l~~~~~~~--~~~-gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~ 155 (371)
T PRK05166 92 -------------ILGNGSEDLIAVICRAV--LRP-GDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAA 155 (371)
T ss_pred -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHh
Confidence 56999999999887655 457 999999999999999988888775
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 156 ~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l 235 (371)
T PRK05166 156 VARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGL 235 (371)
T ss_pred hhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhc
Confidence
Q ss_pred ----------------h--hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy16707 299 ----------------K--ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP 360 (420)
Q Consensus 299 ----------------~--~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~ 360 (420)
. ...+. ..+++...+.++..+|.+ .+|. +..++.++++|+.+.+.|++.|
T Consensus 236 ~GlRiG~~i~~~~~l~~~~~~~~~-~~~~~~~~q~~~~~~l~~----~~~~---~~~~~~~~~~r~~l~~~L~~~g---- 303 (371)
T PRK05166 236 AGLRVGYGLVSDPELVGLLDRVRT-PFNVNGAAQAAALAALDD----EEHL---AKGVALALAERERLKKELAEMG---- 303 (371)
T ss_pred chhheeeeecCCHHHHHHHHHhcc-CCCCCHHHHHHHHHHhcC----HHHH---HHHHHHHHHHHHHHHHHHHHCc----
Confidence 0 11122 234566677666666654 2443 4445788899999999999886
Q ss_pred CcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 361 WNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 361 w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv 419 (420)
+. +.++.|+|.|+.++ .++++.|+ ++||.+.|+. ||+++. .+..+.+.+++.+++
T Consensus 304 ~~-~~p~~g~fl~~~~~~~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 304 YR-IAPSRANFLFFDARRPASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKVL 369 (371)
T ss_pred Ce-eCCCcCCEEEEeCCCCHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence 44 35677999997653 34556775 5799998861 999983 456899999988753
No 95
>KOG0256|consensus
Probab=99.42 E-value=5.5e-12 Score=127.87 Aligned_cols=193 Identities=16% Similarity=0.254 Sum_probs=141.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC
Q psy16707 196 DKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE 275 (420)
Q Consensus 196 ~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g 275 (420)
..-|.+..|+++||+|+|+++-.. +.+++. +||++- |.+.|+|+|....+-.| ++| |
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~-----r~~~v~-fdP~~~--------------Vv~~G~T~ane~l~fcL--adp-g 170 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERA-----RGNRVK-FDPERV--------------VVTNGATSANETLMFCL--ADP-G 170 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHH-----hCCCCc-cCccce--------------EEecccchhhHHHHHHh--cCC-C
Confidence 457888999999999999998221 112221 444333 78999999999887655 558 9
Q ss_pred CEEEEcCCCCCCcHHHHhhc-Ccc--------------------------------------------------------
Q psy16707 276 KVIYVPTPTWGNHIPICKHT-GLE-------------------------------------------------------- 298 (420)
Q Consensus 276 d~VlvpdP~w~ny~~i~~~a-G~~-------------------------------------------------------- 298 (420)
|.-+||.|+||-+..-.+-- |.+
T Consensus 171 dafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ 250 (471)
T KOG0256|consen 171 DAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELIS 250 (471)
T ss_pred ceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHH
Confidence 99999999999886433321 221
Q ss_pred ---------------------------------------------------------------------hh---hh--hh
Q psy16707 299 ---------------------------------------------------------------------KI---LI--RA 304 (420)
Q Consensus 299 ---------------------------------------------------------------------~~---~~--r~ 304 (420)
+. .+ -+
T Consensus 251 ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kms 330 (471)
T KOG0256|consen 251 LLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMS 330 (471)
T ss_pred HHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHh
Confidence 11 11 33
Q ss_pred ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------
Q psy16707 305 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------- 377 (420)
Q Consensus 305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~------- 377 (420)
.++..+.+.|++++.+|+|......+..|.+ .|++.+-..+.+.|+++|. .+++.+.|.|+|..+.
T Consensus 331 sf~~vSs~tQ~~la~LLSD~~f~~~yl~en~---~Rl~~rh~~~~~gLk~lgI----~cl~s~AGlF~wvDlr~lL~s~t 403 (471)
T KOG0256|consen 331 SFGLVSSQTQYLLASLLSDEEFTREYLRENN---KRLRIRHRYIVEGLKALGI----PCLKSNAGLFCWVDLRKLLTSLT 403 (471)
T ss_pred hccCCcHHHHHHHHHHhchHHHHHHHHHHHH---HHHHHHHHHHHhhHHhcCC----ceeecCCeeEEEEEhHHhcCcCC
Confidence 5666788999999999999766666555555 9999999999999999995 4689999999996432
Q ss_pred -H-H--HHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHHH
Q psy16707 378 -A-T--QVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 378 -~-~--~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~v 418 (420)
+ | --++++++-+|-++||. |+.||...++.++-.-+-|+.+
T Consensus 404 fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~ 458 (471)
T KOG0256|consen 404 FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQF 458 (471)
T ss_pred hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 1 2 22788888899999983 9999987777666444555443
No 96
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.41 E-value=1.7e-11 Score=129.01 Aligned_cols=103 Identities=9% Similarity=0.009 Sum_probs=77.7
Q ss_pred cCCCCceeecccccccCCCCCCchH---HHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeec
Q psy16707 157 DTNVNKINLGVGAYRDDQGKPYVLP---SVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQ 233 (420)
Q Consensus 157 d~~~~kInL~iG~y~d~dg~~~~~~---~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~ 233 (420)
+.+.+.|+|++|. ++-++.++. .+.++....... ..+.|++..|.++|++++++++ |.. .|
T Consensus 33 ~~g~~~~~L~~g~---p~~D~~tds~t~a~~~a~~~a~~~-g~~~Y~~~~g~~~Lreaia~~~-~~~-------~v---- 96 (460)
T PRK13238 33 EAGYNPFLLKSED---VFIDLLTDSGTGAMSDRQWAAMMR-GDEAYAGSRSYYRLEDAVKDIF-GYP-------YT---- 96 (460)
T ss_pred HcCCCEEeCCCCC---CCCCCCCCCCchhhhHHHHHHHHh-CCcccCCCCCHHHHHHHHHHHh-CCC-------cE----
Confidence 4578999999996 533344444 466655555433 5678999999999999999977 322 23
Q ss_pred ccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 234 GISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
+.|.|||+|+.+++..+ +.| || |++++|+|++|...++.+|+
T Consensus 97 ------------------v~t~ggt~A~~~~~~al--l~p-GD-Vii~~p~~~~~~~~i~~~G~ 138 (460)
T PRK13238 97 ------------------IPTHQGRAAEQILFPVL--IKK-GD-VVPSNYHFDTTRAHIELNGA 138 (460)
T ss_pred ------------------EECCCHHHHHHHHHHHh--CCC-CC-EEccCCcccchHHHHHHcCC
Confidence 67999999999987644 668 99 99999999999887666553
No 97
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.40 E-value=5.6e-11 Score=120.88 Aligned_cols=214 Identities=16% Similarity=0.202 Sum_probs=145.3
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
..+.|+|+.|. ...++++.+.+|......+.....|.+..|.++||+++++++ |. ++++|
T Consensus 27 ~~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l-~~-----~~~~v--------- 86 (380)
T PRK06225 27 DKEMIWMGQNT-----NHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL-GL-----DDDEA--------- 86 (380)
T ss_pred cCCeEEccCCC-----CCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc-CC-----CCCcE---------
Confidence 35789999885 234667778878777665433567999999999999999975 43 23444
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+|+++.+++..+ +.| ||+|++++|+|+.|...++..|.+
T Consensus 87 -------------~~~~g~t~al~~~~~~~--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l 150 (380)
T PRK06225 87 -------------LITAGATESLYLVMRAF--LSP-GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELV 150 (380)
T ss_pred -------------EEeCCHHHHHHHHHHHh--cCC-CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHH
Confidence 66999999999998755 447 899999999999998777666553
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 151 ~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~ 230 (380)
T PRK06225 151 KENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMA 230 (380)
T ss_pred HhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCc
Confidence
Q ss_pred --------------hh--hhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCC
Q psy16707 299 --------------KI--LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPW 361 (420)
Q Consensus 299 --------------~~--~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w 361 (420)
.. .......+++..++.++...|... .+|. +.+++.++++++.+.+.|+++ |. .+
T Consensus 231 G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~---~~~~---~~~~~~~~~~~~~l~~~L~~~~~~--~~ 302 (380)
T PRK06225 231 GLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEAAIAGLKVK---DEWI---DRIRRTTFKNQKLIKEAVDEIEGV--FL 302 (380)
T ss_pred cceeEEEecCHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcc---hHHH---HHHHHHHHHHHHHHHHHHHhCcCC--cc
Confidence 00 001111223444555554444321 3443 444566777788888888874 31 12
Q ss_pred cccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC-------C----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 362 NHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD-------G----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 362 ~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~-------g----Ris~agl~~~ni~~la~AI~~vv 419 (420)
. ..+..|.|.|+.+ +. +.++.| .++||++.|+ | |++++ .++++++.+.++|.+++
T Consensus 303 ~-~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~iR~s~~-~~~e~l~~~~~~l~~~~ 374 (380)
T PRK06225 303 P-VYPSHGNMMVIDISEAGIDPEDLVEYL-LERKIFVRQGTYTSKRFGDRYIRVSFS-IPREQVEVFCEEFPDVV 374 (380)
T ss_pred c-cCCCCCeEEEEEcccccCCHHHHHHHH-HHCCEEEcCCcccCcCCCCceEEEEeC-CCHHHHHHHHHHHHHHH
Confidence 2 2346677877543 43 444666 4889999874 1 99997 57889999999998875
No 98
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.39 E-value=4.9e-11 Score=120.31 Aligned_cols=208 Identities=16% Similarity=0.133 Sum_probs=146.3
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
...++|||+.|. ++-| +++.+.++...... ....|.+..| ++||+++++++ +. ++++|
T Consensus 30 ~~~~~i~l~~~~--~~~~---~~~~~~~a~~~~~~--~~~~y~~~~~-~~lr~~ia~~~-~~-----~~~~i-------- 87 (367)
T PRK02731 30 GIADIIKLASNE--NPLG---PSPKAIEAIRAAAD--ELHRYPDGSG-FELKAALAEKF-GV-----DPERI-------- 87 (367)
T ss_pred CCCceEEecCCC--CCCC---CCHHHHHHHHHHHH--hhcCCCCCcH-HHHHHHHHHHh-Cc-----CHHHE--------
Confidence 456789999996 2223 35667777666543 2467876654 79999999976 32 23445
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
+.|.|+++++.+.+..+ +.+ ||+|++++|+|+.|...++..|++
T Consensus 88 --------------~~t~G~~~~l~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 150 (367)
T PRK02731 88 --------------ILGNGSDEILELLARAY--LGP-GDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAA 150 (367)
T ss_pred --------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHH
Confidence 56999999998877655 447 899999999999999888877775
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 151 ~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 230 (367)
T PRK02731 151 VTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLA 230 (367)
T ss_pred hCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCc
Confidence
Q ss_pred --------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q psy16707 299 --------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN 362 (420)
Q Consensus 299 --------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~ 362 (420)
..+ .+..+ +.+..++.++..+|++ ..| ++.+++.++++|+.+.+.|++.| |.
T Consensus 231 G~RiG~l~~~~~~~~~l~~~~~~~-~~~~~~~~~a~~~l~~----~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~ 298 (367)
T PRK02731 231 GLRVGYGIAPPEIIDALNRVRQPF-NVNSLALAAAVAALDD----DAF---VEKSRALNAEGMAWLTEFLAELG----LE 298 (367)
T ss_pred ccceeeeeCCHHHHHHHHHccCCC-CCCHHHHHHHHHHhCC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----Cc
Confidence 001 12222 3355667777666764 234 34455788889999999999886 44
Q ss_pred ccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--------CcEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 363 HITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD--------GRISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 363 ~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~--------gRis~agl~~~ni~~la~AI~~vv~ 420 (420)
.. ++.|.|.|+.+ ++ ++++.| .++||++.++ -||+++ +.+.++.+.+++.++++
T Consensus 299 ~~-~~~g~~~~i~~~~~~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 299 YI-PSVGNFILVDFDDGKDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred cC-CCCceEEEEECCCCCCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 44 46789998765 34 445666 5789999874 299987 56889999999998763
No 99
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.39 E-value=4e-11 Score=121.15 Aligned_cols=206 Identities=13% Similarity=0.083 Sum_probs=145.0
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.|||++|+ + + .++++.|.+|....... ...|++ .|.+++|+++++++ +. ++++|
T Consensus 20 ~~~i~l~~~~---~-~-~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~-~~-----~~~~i---------- 75 (356)
T PRK08056 20 DQLLDFSANI---N-P-LGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH-QV-----PASWI---------- 75 (356)
T ss_pred hhEEEecccc---C-C-CCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh-Cc-----ChhhE----------
Confidence 4679999996 2 2 45677777776654432 346865 57999999999986 32 34555
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|++.++.+++..+ .| |+ +++++|+|++|..+++..|++
T Consensus 76 ------------~it~Ga~~~l~~~~~~l---~~-g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 138 (356)
T PRK08056 76 ------------LAGNGETESIFAVVSGL---KP-RR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEA 138 (356)
T ss_pred ------------EECCCHHHHHHHHHHHh---CC-CC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHh
Confidence 56999999999888754 36 65 788899999999999888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 139 ~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 218 (356)
T PRK08056 139 LTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPG 218 (356)
T ss_pred ccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcc
Confidence
Q ss_pred --------------hhhh-hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707 299 --------------KILI-RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH 363 (420)
Q Consensus 299 --------------~~~~-r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~ 363 (420)
..+. +....+++..++.++..+|.+ ..|. +.++++++++|+.+.+.|++++ + |..
T Consensus 219 ~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~----~~~~---~~~~~~~~~~r~~l~~~L~~~~--~-~~~ 288 (356)
T PRK08056 219 LRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQD----RAYQ---QATWQWLAEEGARFYQALCALP--L-LTV 288 (356)
T ss_pred hhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCC----HHHH---HHHHHHHHHHHHHHHHHHhcCC--C-cEE
Confidence 0111 112233455677666666754 3553 5566889999999999998763 1 543
Q ss_pred cCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 364 ITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 364 i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
. ++.|+|.|+.++ .++++.|+ ++||.+.++ + ||+++ +.++.+.+.++++++++
T Consensus 289 ~-~~~~~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 289 W-PGRANYLFLRCERPDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNVLT 354 (356)
T ss_pred c-CCCCcEEEEEcCCChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHHHc
Confidence 3 557899987653 34556665 789999763 1 99987 45788999999998764
No 100
>PLN02672 methionine S-methyltransferase
Probab=99.38 E-value=3.7e-11 Score=136.25 Aligned_cols=219 Identities=17% Similarity=0.114 Sum_probs=147.0
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccC-CceeeecccCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKD-NLISIVQGISG 237 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~-~~i~~~~~~~~ 237 (420)
++++|+|++|. + ..++++.|++|....... . .| ..|.+++++++++++-..++...++ +.
T Consensus 696 g~~vI~LsinE---~--d~ppPp~V~eAi~eal~~-~--~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~--------- 756 (1082)
T PLN02672 696 ESSLIHMDVDE---S--FLPVPSAVKASIFESFVR-Q--NI--SESETDPRPSILQFIKSNYGFPTDSCTE--------- 756 (1082)
T ss_pred CCCEEEEeCCC---C--CCCCCHHHHHHHHHHHhh-c--CC--CCCChHHHHHHHHHHHHHhCcCCCCCCE---------
Confidence 57899999996 3 356788888887765432 2 22 4578899999999984433222222 23
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
|+.|.|.++++..+...+ +.| ||.|++|+|+|++|...++..|++
T Consensus 757 -------------IIvt~Gs~elL~lll~aL--l~p-GD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~L 820 (1082)
T PLN02672 757 -------------FVYGDTSLALFNKLVLCC--VQE-GGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTL 820 (1082)
T ss_pred -------------EEEeCCHHHHHHHHHHHH--cCC-CCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 366888889998877644 458 999999999999999999988875
Q ss_pred ----------------------------------------------------------hh-----hh----hh-------
Q psy16707 299 ----------------------------------------------------------KI-----LI----RA------- 304 (420)
Q Consensus 299 ----------------------------------------------------------~~-----~~----r~------- 304 (420)
.. +. ..
T Consensus 821 e~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~ 900 (1082)
T PLN02672 821 ASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSF 900 (1082)
T ss_pred HHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCc
Confidence 00 00 00
Q ss_pred ------ccC--------------CCch-HHHHHHHHH-hCCh------------h-h---HHHHHHHHHHHHHHHHHHHH
Q psy16707 305 ------FYS--------------SPPI-HGARIVQEI-LGDP------------K-L---KAQWLTEVKGMADRIISMRQ 346 (420)
Q Consensus 305 ------~~s--------------~pp~-~ga~iv~~I-L~dp------------~-L---~~~w~~el~~m~~r~~~~R~ 346 (420)
++| .|+. .-..+.... +..+ + + ...|.+.++++++.|+++|+
T Consensus 901 nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd 980 (1082)
T PLN02672 901 AVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAE 980 (1082)
T ss_pred eEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH
Confidence 000 0111 011110000 0111 0 0 13477888899999999999
Q ss_pred HHHHHHHhcCCCCCCcccCCCCceEEecC---------------------CCH-HHHHHHHHhCCeEEeCC------C--
Q psy16707 347 SLKDNLQKEGSNKPWNHITDQIGMFCYTG---------------------LNA-TQVEKLIKEHSVYLTKD------G-- 396 (420)
Q Consensus 347 ~l~~~L~~~g~~~~w~~i~~q~GmF~~~~---------------------l~~-~~v~~Ll~e~~Vy~~p~------g-- 396 (420)
.+.+.|++.| |.+.++++|+|.|.. +++ +++++|++++||.+.|| |
T Consensus 981 ~L~e~L~~~G----i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~ 1056 (1082)
T PLN02672 981 RLKETLEACG----WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYC 1056 (1082)
T ss_pred HHHHHHHHCC----CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeE
Confidence 9999999987 777888999999962 233 46688999999999996 2
Q ss_pred cEEEcccCCCCHHHHHHHHHH
Q psy16707 397 RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 397 Ris~agl~~~ni~~la~AI~~ 417 (420)
|||++ .+.+.++...+.|.+
T Consensus 1057 RIsfa-~~~e~LeeALerL~k 1076 (1082)
T PLN02672 1057 RFSFA-LEDSEFDRALKAIAR 1076 (1082)
T ss_pred EEEec-CCHHHHHHHHHHHHH
Confidence 99998 466666666666654
No 101
>KOG0259|consensus
Probab=99.38 E-value=1.6e-10 Score=116.43 Aligned_cols=236 Identities=17% Similarity=0.149 Sum_probs=172.3
Q ss_pred ChHHHHHHHHHccCC----CCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 145 PSSNLLTEAFKKDTN----VNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 145 d~i~~l~~~~~~d~~----~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
-++..+........+ ..+|-|+.|. |. +.+.+-+.+.+|..........++|+|..|++.-|+|+|+++.+
T Consensus 42 ~tir~i~~~l~~~~~p~~~k~iipl~~GD---Psv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~ 118 (447)
T KOG0259|consen 42 VTIRGILSALFDCCDPEKKKPILPLGHGD---PSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNR 118 (447)
T ss_pred ccHHHHHHHHhhcCCcccCceeccCCCCC---CCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhc
Confidence 345555444433333 3568999983 33 55666677777766666556678999999999999999999766
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.-...++++ +++.|.|=++|+.++...|++ | |..|++|-|+||-|...+...|++
T Consensus 119 ~l~~kl~a~----------------------DV~ltsGC~qAIe~~i~~LA~--p-~aNILlPrPGfp~Y~~~a~~~~lE 173 (447)
T KOG0259|consen 119 DLPNKLTAD----------------------DVVLTSGCSQAIELAISSLAN--P-GANILLPRPGFPLYDTRAIYSGLE 173 (447)
T ss_pred CCCCccCcC----------------------ceEEeccchHHHHHHHHHhcC--C-CCceecCCCCCchHHHhhhhcCce
Confidence 543334444 347799999999999987764 8 999999999999999999988886
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 174 VR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvp 253 (447)
T KOG0259|consen 174 VRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVP 253 (447)
T ss_pred eEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccc
Confidence
Q ss_pred -----------------------------------------hh----h--hhhccCCCchHHHHHHHHHhCChhhHHHHH
Q psy16707 299 -----------------------------------------KI----L--IRAFYSSPPIHGARIVQEILGDPKLKAQWL 331 (420)
Q Consensus 299 -----------------------------------------~~----~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~ 331 (420)
.. + .-.....|++.-|.+.-.||.. ..+++-
T Consensus 254 mg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~k--Tp~efF 331 (447)
T KOG0259|consen 254 MGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEK--TPEEFF 331 (447)
T ss_pred hhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHh--ChHHHH
Confidence 11 1 1223567788888878888742 224443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-ccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC----
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG---- 396 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~-~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g---- 396 (420)
+.. ..-+++.-+..++.|++.-. .. ...+.+-||.|++++ -+|+.+|.+|.+|++.||-
T Consensus 332 ~k~---~~~lk~na~l~y~~Lk~IP~---l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~ 405 (447)
T KOG0259|consen 332 DKK---LSFLKSNADLCYSRLKDIPC---LTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGL 405 (447)
T ss_pred HHH---HHHHHhhHHHHHHHHhcCCC---cccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccC
Confidence 333 35577788899999987632 34 566777899998765 3799999999999999983
Q ss_pred ----cEEEcccCCCCHHHHHHHHHH
Q psy16707 397 ----RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 397 ----Ris~agl~~~ni~~la~AI~~ 417 (420)
||+++ +..+-+++.++.|++
T Consensus 406 ~nw~Ri~i~-~~~~~leea~~Rik~ 429 (447)
T KOG0259|consen 406 KNWLRIVIT-VEEEMLEEAFSRIKE 429 (447)
T ss_pred CCeEEEEEc-cChHHHHHHHHHHHH
Confidence 99998 788888887777764
No 102
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.36 E-value=4.8e-11 Score=119.90 Aligned_cols=200 Identities=19% Similarity=0.194 Sum_probs=138.9
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.|||+.|. +. .++++.+.++......+.....|. ..|.++||+++++++ | +++++|
T Consensus 18 ~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~-~-----~~~~~I---------- 75 (337)
T PRK03967 18 NYRIWLDKNE---NP--FDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY-G-----LDAENI---------- 75 (337)
T ss_pred CceEEecCCC---CC--CCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh-C-----cCcceE----------
Confidence 4679999996 22 245556666655544322356785 579999999999987 3 234555
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|+++++...+..+ + ||+|++++|+|+.|..+++..|++
T Consensus 76 ------------~~t~G~~~~l~~~~~~~----~-gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~ 138 (337)
T PRK03967 76 ------------AVGNGSDELISYLVKLF----E-GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA 138 (337)
T ss_pred ------------EEcCCHHHHHHHHHHHh----C-CCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc
Confidence 66999999998776532 7 899999999999999888877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 139 ~~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~ 218 (337)
T PRK03967 139 KNASAVFICSPNNPTGNLQPEEEILKVLETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIA 218 (337)
T ss_pred cCCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeec
Confidence
Q ss_pred -------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE
Q psy16707 299 -------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF 371 (420)
Q Consensus 299 -------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF 371 (420)
....+..| +++..++.++..+|++. +|..+. +.++.+.|+.+.+.|.+.. .+.+|+|
T Consensus 219 ~~~~i~~~~~~~~~~-~~~~~~q~~~~~~l~~~----~~~~~~---~~~~~~~r~~l~~~L~~~~--------~~~~~~~ 282 (337)
T PRK03967 219 NEEIIDALYRIKPPF-SLNILTMKIVRLALDHY----DLIEER---IDYIIKERERVRRELGEYA--------YPSDANF 282 (337)
T ss_pred CHHHHHHHHhhcCCC-CCCHHHHHHHHHHHhCH----HHHHHH---HHHHHHHHHHHHHHhccCc--------CCCCCcE
Confidence 11123334 45788999888888764 343322 2455667888888886542 3578999
Q ss_pred EecCCCHHHHHHHHHhCCeEEeCC-------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 372 CYTGLNATQVEKLIKEHSVYLTKD-------GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 372 ~~~~l~~~~v~~Ll~e~~Vy~~p~-------gRis~agl~~~ni~~la~AI~~vv 419 (420)
.|+.++ ..+.|+ ++||.+.+. -||+++ +.++.+.+.++|.++.
T Consensus 283 ~~~~~~--~~~~l~-~~gi~v~~~~~~~~~~~Ri~~~--~~~~~~~l~~~l~~~~ 332 (337)
T PRK03967 283 LLLKLD--AYDYLL-ENGIVVRKLSGRLEGHIRVTVG--KREENDEFIKALKEIK 332 (337)
T ss_pred EEEhHH--HHHHHH-HCCEEEEeCCCCCCCeEEEecC--CHHHHHHHHHHHHHHH
Confidence 998764 456665 679999643 199987 3467788988887753
No 103
>PRK03321 putative aminotransferase; Provisional
Probab=99.35 E-value=9.3e-11 Score=117.78 Aligned_cols=206 Identities=17% Similarity=0.162 Sum_probs=141.8
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.++|||++|. +...+++.|.+|...... ....| |..|.++||+++++++ + +++++|
T Consensus 22 ~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~--~~~~y-~~~g~~~lr~~ia~~~-~-----~~~~~I---------- 77 (352)
T PRK03321 22 PGAIKLSSNE-----TPFGPLPSVRAAIARAAA--GVNRY-PDMGAVELRAALAEHL-G-----VPPEHV---------- 77 (352)
T ss_pred ccceeccCCC-----CCCCCCHHHHHHHHHHHH--hcCcC-CCCcHHHHHHHHHHHh-C-----cCHHHE----------
Confidence 3689999996 224456678888776654 24567 5679999999999987 3 234445
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|.++++..++..+ +.| ||.|++|+|+|+.|...++..|++
T Consensus 78 ------------~~~~G~~~~l~~~~~~~--~~~-gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~ 142 (352)
T PRK03321 78 ------------AVGCGSVALCQQLVQAT--AGP-GDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAI 142 (352)
T ss_pred ------------EECCCHHHHHHHHHHHh--cCC-CCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhh
Confidence 55888888888877644 457 999999999999998888877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 143 ~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 222 (352)
T PRK03321 143 TDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAG 222 (352)
T ss_pred ccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHH
Confidence
Q ss_pred -------------hhhhh-hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy16707 299 -------------KILIR-AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI 364 (420)
Q Consensus 299 -------------~~~~r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i 364 (420)
..+.+ ....+++..++.++...|.+ ...|.+.+ .++.+.|+.+.+.|++.| |..
T Consensus 223 lRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~~---~~~~~~~~----~~~~~~r~~~~~~L~~~~----~~~- 290 (352)
T PRK03321 223 LRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLAA---EDELLERV----DAVVAERDRVRAALRAAG----WTV- 290 (352)
T ss_pred HhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC---HHHHHHHH----HHHHHHHHHHHHHHHHCC----Ccc-
Confidence 11111 11224456666655555643 13443333 344566778999998876 553
Q ss_pred CCCCceEEecCCC--H-HHHHHHHHhCCeEEeCC----CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 365 TDQIGMFCYTGLN--A-TQVEKLIKEHSVYLTKD----GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 365 ~~q~GmF~~~~l~--~-~~v~~Ll~e~~Vy~~p~----gRis~agl~~~ni~~la~AI~~vv 419 (420)
.+..|+|.|+.+. . ++++.| +++||.+.+- -||+++ +.+..+++.+++++++
T Consensus 291 ~~~~g~~i~i~l~~~~~~~~~~l-~~~gI~v~~~~~~~iRi~~~--~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 291 PPSQANFVWLPLGERTADFAAAA-AEAGVVVRPFAGEGVRVTIG--APEENDAFLRAARAWR 349 (352)
T ss_pred CCCCCCEEEEeCCCCHHHHHHHH-HHCCEEEEccCCCcEEEeeC--CHHHHHHHHHHHHHHh
Confidence 4457999997653 3 455665 7899999873 288886 6788999999998864
No 104
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.34 E-value=1.2e-10 Score=117.00 Aligned_cols=214 Identities=17% Similarity=0.203 Sum_probs=142.8
Q ss_pred HHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccC
Q psy16707 147 SNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKD 226 (420)
Q Consensus 147 i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~ 226 (420)
+..+.+.+..+ ..++|||++|. + ...++|.++++...... ..+.|.+..+ ++||+++++++ |. ++
T Consensus 22 ~~~~~~~~~~~-~~~~i~l~~~~---~--~~~~~~~~~~~~~~~~~--~~~~y~~~~~-~~lr~~ia~~~-~~-----~~ 86 (361)
T PRK00950 22 KEEIAREYGID-PESIIKLGSNE---N--PLGPSPKAVEAIEKELS--KIHRYPEPDA-PELREALSKYT-GV-----PV 86 (361)
T ss_pred HHHHHHHhCCC-ccceEEccCCC---C--CCCCCHHHHHHHHHHHH--hhcCCCCCCH-HHHHHHHHHHh-CC-----CH
Confidence 44455555332 23789999996 2 13355666666655443 2467877655 99999999986 42 23
Q ss_pred CceeeecccCCCCccccccccccceee-cccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------
Q psy16707 227 NLISIVQGISGTGSLRVGAAFQISIVQ-GISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------- 298 (420)
Q Consensus 227 ~~i~~~~~~~~~~~~~~~~~~~~~~vq-t~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------- 298 (420)
+.| +. |.|.++++.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 87 ~~i----------------------~~~~~Ga~~~i~~~~~~~--~~~-gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~ 141 (361)
T PRK00950 87 ENI----------------------IVGGDGMDEVIDTLMRTF--IDP-GDEVIIPTPTFSYYEISAKAHGAKPVYAKRE 141 (361)
T ss_pred HHE----------------------EEeCCCHHHHHHHHHHHh--cCC-CCEEEEcCCChHHHHHHHHHcCCEEEEeecC
Confidence 444 44 567778888877644 447 899999999999999888887774
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 142 ~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~ 221 (361)
T PRK00950 142 EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTF 221 (361)
T ss_pred CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEee
Confidence
Q ss_pred -----------------hhh------hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy16707 299 -----------------KIL------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE 355 (420)
Q Consensus 299 -----------------~~~------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~ 355 (420)
..+ .+..+ +.+..++.++...|.+ .+| +++++++++++|+.+.+.|.
T Consensus 222 SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~----~~~---~~~~~~~~~~~r~~l~~~l~-- 291 (361)
T PRK00950 222 SKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF-SLTRLSQAAAIAALSD----KEY---IEKSIEHGIKSREYLYNELP-- 291 (361)
T ss_pred hHhhcCchhhcchhcCCHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcC----HHH---HHHHHHHHHHHHHHHHhhcC--
Confidence 111 12223 2455666666666654 233 44556888888998887764
Q ss_pred CCCCCCcccCCCCceEEecCC---CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 356 GSNKPWNHITDQIGMFCYTGL---NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 356 g~~~~w~~i~~q~GmF~~~~l---~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+. +.++.|+|.|+.+ +. ++++.|. ++||++.|+ + |||++ +.+.++++.+++++++
T Consensus 292 -----~~-~~~~~~~~i~~~~~~~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il 360 (361)
T PRK00950 292 -----FK-VYPSEANFVLVDVTPMTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIV 360 (361)
T ss_pred -----ee-ECCCcceEEEEECCCCCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHh
Confidence 22 3456788998744 33 4556664 679999763 1 99988 5678999999999875
No 105
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.31 E-value=1.7e-10 Score=116.71 Aligned_cols=204 Identities=18% Similarity=0.148 Sum_probs=141.9
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+++||+.|. ++.+ .++.+.++...... ....|++ .|.++||+++++++ + +++++|
T Consensus 19 ~~~~~l~~~~--~~~~---~p~~~~~a~~~~~~--~~~~Y~~-~~~~~lr~~ia~~~-~-----~~~~~i---------- 74 (354)
T PRK06358 19 NMILDFSANI--NPLG---VPESLKQAITENLD--KLVEYPD-PDYLELRKRIASFE-Q-----LDLENV---------- 74 (354)
T ss_pred cceEEecCCC--CCCC---CCHHHHHHHHHHHH--hhhcCCC-ccHHHHHHHHHHHh-C-----CChhhE----------
Confidence 4579999996 3333 35677777666543 3456854 57999999999987 3 345555
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|++.++.+++..+ . ++.|++++|+|+.|...++..|++
T Consensus 75 ------------~it~Ga~~~l~~~~~~~----~-~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~ 137 (354)
T PRK06358 75 ------------ILGNGATELIFNIVKVT----K-PKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEE 137 (354)
T ss_pred ------------EECCCHHHHHHHHHHHh----C-CCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHh
Confidence 56999999999887644 2 368999999999999998877664
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 138 ~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl 217 (354)
T PRK06358 138 IKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAI 217 (354)
T ss_pred hccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccC
Confidence
Q ss_pred ----------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy16707 299 ----------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP 360 (420)
Q Consensus 299 ----------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~ 360 (420)
..+ .+..| +.+...+.++..+|++ . +.++.++++++++|+.+.+.|++.+ +
T Consensus 218 ~G~RiG~lv~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~----~---~~~~~~~~~~~~~r~~l~~~L~~~~--~- 286 (354)
T PRK06358 218 PGLRLGYGLTSNKNLAEKLLQMREPW-SINTFADLAGQTLLDD----K---EYIKKTIQWIKEEKDFLYNGLSEFK--G- 286 (354)
T ss_pred cchhheeeecCCHHHHHHHHHhCCCC-cchHHHHHHHHHHhcc----H---HHHHHHHHHHHHHHHHHHHHHhcCC--C-
Confidence 011 11122 2355556666655643 2 2346667889999999999998762 2
Q ss_pred CcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 361 WNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 361 w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~vv 419 (420)
+....+ .|.|.|+.++ .++.+.|+ ++||.+.|+. ||+++ +.+..++|.+++++++
T Consensus 287 ~~~~~~-~g~f~~~~~~~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 287 IKVYKP-SVNFIFFKLEKPIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred cEEcCC-cceEEEEEcCchHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 554444 5678887764 45566665 6899998851 78875 5688899999998876
No 106
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.29 E-value=4.3e-10 Score=113.67 Aligned_cols=217 Identities=18% Similarity=0.197 Sum_probs=165.2
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
.++++-|.|-. -+++++|.|.+|.++-.+ .+..+|+ .+.++|-+|+++|+...+.-.++++-|
T Consensus 24 ~~DvlPmWVAD-----MDf~~pp~i~~Al~~rvd-hGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i--------- 86 (388)
T COG1168 24 NEDVLPMWVAD-----MDFPTPPEIIEALRERVD-HGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWI--------- 86 (388)
T ss_pred CCCcceeeeec-----ccCCCCHHHHHHHHHHHh-cCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceE---------
Confidence 46888888874 678999999999998775 4778887 788999999999997777655666655
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.++|.--++.++.+.|.. | ||.|+|+.|.|+++....+..|-+
T Consensus 87 -------------~~~p~VVpgi~~~I~~~T~--~-gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~L 150 (388)
T COG1168 87 -------------VFVPGVVPGISLAIRALTK--P-GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDAL 150 (388)
T ss_pred -------------EEcCcchHhHHHHHHHhCc--C-CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHH
Confidence 5688999999999988865 7 999999999999999999988775
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 151 E~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~sa 230 (388)
T COG1168 151 EKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSA 230 (388)
T ss_pred HHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeec
Confidence
Q ss_pred --------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 --------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL 352 (420)
Q Consensus 299 --------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L 352 (420)
..+.+.....|...|..+.....++- ++|.+++. +=++..|+-+.+.|
T Consensus 231 SKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G---~~WLd~L~---~yl~~N~~~~~~~l 304 (388)
T COG1168 231 SKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG---EPWLDELL---EYLKDNRDYVADFL 304 (388)
T ss_pred cccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---hHHHHHHH---HHHHHHHHHHHHHH
Confidence 44456777788888876444445443 68988888 66888999999999
Q ss_pred HhcCCCCCCcccCCCCceEE-e-----cCCCH-HHHHHHHHhCCeEEeCC------C----cEEEcccCCCCHHHHHHHH
Q psy16707 353 QKEGSNKPWNHITDQIGMFC-Y-----TGLNA-TQVEKLIKEHSVYLTKD------G----RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 353 ~~~g~~~~w~~i~~q~GmF~-~-----~~l~~-~~v~~Ll~e~~Vy~~p~------g----Ris~agl~~~ni~~la~AI 415 (420)
.+.- | |-.++.+.|.|. | +|+++ +-.+.|+++.+|.+.+| | |+|++ .+-.-++...+.|
T Consensus 305 ~~~~-P--~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~a-cpr~~L~eal~ri 380 (388)
T COG1168 305 NKHL-P--GVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFA-CPRAILEEALERL 380 (388)
T ss_pred HhhC-C--CcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecC-CCHHHHHHHHHHH
Confidence 8763 3 455666666666 6 47775 44589999999999986 2 99998 4444444444444
Q ss_pred HHH
Q psy16707 416 HAV 418 (420)
Q Consensus 416 ~~v 418 (420)
.++
T Consensus 381 ~~a 383 (388)
T COG1168 381 KRA 383 (388)
T ss_pred HHH
Confidence 443
No 107
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.23 E-value=4.6e-10 Score=112.41 Aligned_cols=208 Identities=15% Similarity=0.168 Sum_probs=141.0
Q ss_pred hHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcccc
Q psy16707 146 SSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLK 225 (420)
Q Consensus 146 ~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~ 225 (420)
||-.+...+. .+.++.|+++.|. ++.+ + +. .++. . ...+.|.+..| ++||+++++++ |. +
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~~~--~~~~-~---~~-~~~~---~--~~~~~y~~~~~-~~lr~~la~~~-~~-----~ 63 (330)
T TIGR01140 4 NLRRAAARYG-IPPEDWLDFSTGI--NPLG-P---PV-PPIP---A--SAWARYPDPEY-DELRAAAAAYY-GL-----P 63 (330)
T ss_pred cHHHHHHHcC-CChhheeEccccC--CCCC-C---Ch-hhcc---h--HHHhhCCCccH-HHHHHHHHHHh-CC-----C
Confidence 3444544442 2367889999997 2322 2 22 2111 1 23567887776 99999999976 42 2
Q ss_pred CCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------
Q psy16707 226 DNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------- 298 (420)
Q Consensus 226 ~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------- 298 (420)
++.| +.|.|++.++.+++.++ .+ | .|++++|+|+.|..+++..|++
T Consensus 64 ~~~i----------------------~~t~G~~~~i~~~~~~l---~~-g-~vl~~~p~y~~~~~~~~~~g~~~~~~~d~ 116 (330)
T TIGR01140 64 AASV----------------------LPVNGAQEAIYLLPRLL---AP-G-RVLVLAPTYSEYARAWRAAGHEVVELPDL 116 (330)
T ss_pred hhhE----------------------EECCCHHHHHHHHHHHh---CC-C-eEEEeCCCcHHHHHHHHHcCCEEEEeCCH
Confidence 3444 66999999999977654 36 6 6999999999999999998875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 117 ~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 196 (330)
T TIGR01140 117 DRLPAALEELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFF 196 (330)
T ss_pred HHHHhhcccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhh
Confidence
Q ss_pred -----------------h--hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707 299 -----------------K--ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK 359 (420)
Q Consensus 299 -----------------~--~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~ 359 (420)
. ...+..++ ++..++.++..+|++ .+|.++ ++++++++|+.+.+.|++.+
T Consensus 197 g~~G~R~G~i~~~~~~~~~l~~~~~~~~-~s~~~q~~~~~~l~~----~~~~~~---~~~~~~~~~~~l~~~L~~~~--- 265 (330)
T TIGR01140 197 GLAGLRLGFVVAHPALLARLREALGPWT-VNGPARAAGRAALAD----TAWQAA---TRARLAAERARLAALLARLG--- 265 (330)
T ss_pred cCchhhhhheeCCHHHHHHHHhcCCCCC-chHHHHHHHHHHHhc----hHHHHH---HHHHHHHHHHHHHHHHHhCC---
Confidence 0 11122333 355677777777765 356543 45899999999999999876
Q ss_pred CCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHH
Q psy16707 360 PWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 360 ~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI 415 (420)
+..+.++.|+|.|+.++ .+++++|+ ++||++.|+. ||+++.-+ ++ +.+..++
T Consensus 266 -~~~~~~~~~~f~~~~~~~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~-~~-~~~~~~l 329 (330)
T TIGR01140 266 -GLEVVGGTALFLLVRTPDAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDE-EN-DRLEEAL 329 (330)
T ss_pred -CceECCCCCeEEEEEcCCHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHH-HH-HHHHHhh
Confidence 23345678999998763 35567775 5799999851 99998533 33 6666654
No 108
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.20 E-value=9.7e-10 Score=110.98 Aligned_cols=201 Identities=14% Similarity=0.129 Sum_probs=135.7
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.|+|+.++ ++-| +++.+ .+ .....|++. +.++||+++++++ |. +++.|
T Consensus 31 ~~~~~l~~ne--~~~~---~~~~~-----~~---~~~~~Yp~~-~~~~Lr~aia~~~-~~-----~~~~I---------- 80 (354)
T PRK04635 31 RGDIWINANE--SPFN---NEYKL-----DL---ARLNRYPEC-QPPELINAYSAYA-GV-----APEQI---------- 80 (354)
T ss_pred CCcEEeeCCC--CCCC---CChhh-----hh---HHhccCCCC-CHHHHHHHHHHHh-Cc-----CHHHE----------
Confidence 4569999986 2222 22222 11 124678765 6899999999864 43 35555
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCC-CEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-KVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-d~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+++++.+++..+ +.| | |.|++++|+|+.|...++..|++
T Consensus 81 ------------~it~Gs~~~i~~~~~~~--~~~-g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~ 145 (354)
T PRK04635 81 ------------LTSRGADEAIELLIRAF--CEP-GQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQL 145 (354)
T ss_pred ------------EEeCCHHHHHHHHHHHh--cCC-CCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHhc
Confidence 56999999999998765 347 6 99999999999999888877654
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 146 ~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~ 225 (354)
T PRK04635 146 DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGF 225 (354)
T ss_pred cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhh
Confidence
Q ss_pred ----hhh------hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707 299 ----KIL------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI 368 (420)
Q Consensus 299 ----~~~------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~ 368 (420)
..+ .+..|+ .+...+.++...|.++. + +.++..+++++++|+.+.+.|++.+. +... +..
T Consensus 226 ~i~~~~~~~~l~~~~~~~~-~~~~~~~~a~~~l~~~~----~-~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~-~~~ 295 (354)
T PRK04635 226 TLANEELIEILMRVIAPYP-VPLPVSEIATQALSEAG----L-ARMKFQVLDLNAQGARLQAALSMYGG---AKVL-EGN 295 (354)
T ss_pred hhCCHHHHHHHHhhcCCCC-CCHHHHHHHHHHHhccc----H-HHHHHHHHHHHHHHHHHHHHHHhCCC---ceEC-CCC
Confidence 001 111222 23444455555454321 2 33555667889999999999998752 4434 446
Q ss_pred ceEEecCC-CHHHHHHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 369 GMFCYTGL-NATQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 369 GmF~~~~l-~~~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI~~ 417 (420)
|.|.|+.+ +.+.+.++++++||.+.+. + |||++ +.+.++.+.+++++
T Consensus 296 g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~ 351 (354)
T PRK04635 296 GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRN 351 (354)
T ss_pred CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence 88998766 4555555668999998532 1 99987 57889999999875
No 109
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.17 E-value=2.1e-09 Score=107.71 Aligned_cols=193 Identities=14% Similarity=0.240 Sum_probs=132.5
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS 240 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 240 (420)
++|||+.++ +|-| +.++.+.+ ..+ ..|+. |..+||+++++++ |. ++|
T Consensus 21 ~~i~l~~ne--~p~~--~~~~~~~~--~~~------~~yp~--~~~~Lr~~ia~~~-~~-------~~I----------- 67 (330)
T PRK05664 21 DWLDLSTGI--APWP--WPVPAIPA--DAW------ARLPE--TDDGLEAAARAYY-GA-------PQL----------- 67 (330)
T ss_pred HheeecCCc--CCCC--CCCcccCH--HHH------HhCCC--ChHHHHHHHHHHh-CC-------CCE-----------
Confidence 579999996 3434 22222322 111 23643 4589999999976 32 234
Q ss_pred cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------------
Q psy16707 241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------- 298 (420)
Q Consensus 241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------- 298 (420)
+.|.|++.++.+.+. +.| ||+|++++|+|+.|..+++..|++
T Consensus 68 -----------~it~Gs~~al~~~~~----~~~-gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~v~l~ 131 (330)
T PRK05664 68 -----------LPVAGSQAAIQALPR----LRA-PGRVGVLSPCYAEHAHAWRRAGHQVRELDEAEVEAALDSLDVLVVV 131 (330)
T ss_pred -----------EECcCHHHHHHHHHH----ccC-CCEEEEcCCChHHHHHHHHHcCCeEEEechhhHhhhhcCCCEEEEe
Confidence 669999999988753 347 999999999999999999999885
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 132 nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~ 211 (330)
T PRK05664 132 NPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALL 211 (330)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeCHHHH
Confidence
Q ss_pred hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCc--eEEec
Q psy16707 299 KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIG--MFCYT 374 (420)
Q Consensus 299 ~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~G--mF~~~ 374 (420)
..+ .+..|+ .+...+.++..+|+++ +|. +.++.+++++|+.+.+.|++.|. .+..| +|.|+
T Consensus 212 ~~~~~~~~~~~-~~~~~~~~~~~~L~~~----~~~---~~~~~~~~~~r~~l~~~L~~~~~-------~~~~~~~~f~~~ 276 (330)
T PRK05664 212 RALAELLGPWT-VSGPTRWLAQAALADT----PWQ---RRQRERLLAASQRLAALLRRHGL-------TPAGGCALFQWV 276 (330)
T ss_pred HHHHHhcCCCC-CCHHHHHHHHHHHhCh----HHH---HHHHHHHHHHHHHHHHHHHHCCC-------cccCCcceEEEE
Confidence 111 122233 3556677777777653 333 45678999999999999998872 23445 78887
Q ss_pred CC-CHHHHHHHHHhCCeEEeCC-----CcEEEcccCCCCHHHHHHHHHHH
Q psy16707 375 GL-NATQVEKLIKEHSVYLTKD-----GRISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 375 ~l-~~~~v~~Ll~e~~Vy~~p~-----gRis~agl~~~ni~~la~AI~~v 418 (420)
.+ +.+.+...+.++||.+..- -||++++ +.++.+.+.+++.+.
T Consensus 277 ~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~ 325 (330)
T PRK05664 277 RTEDAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWARLDQALLAY 325 (330)
T ss_pred ecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHH
Confidence 65 4444544457889999652 2999885 556799999998765
No 110
>KOG0634|consensus
Probab=99.14 E-value=2.3e-09 Score=109.76 Aligned_cols=195 Identities=16% Similarity=0.143 Sum_probs=143.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHcC--CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707 196 DKEYAPIIGAPDFGKLAAQLAYG--EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP 273 (420)
Q Consensus 196 ~~~Y~p~~G~~~fr~a~~~~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p 273 (420)
.-.|.+..|+++++.-+.+ ..+ .+.+...+ -+++.|.|-|.++..+.+.+ +++
T Consensus 93 alQYg~s~G~peLl~fik~-h~~~~ih~p~~~~----------------------wdiiit~G~t~~l~~~l~~~--~N~ 147 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKD-HNRPTIHAPPYKN----------------------WDIIITNGNTDGLFKVLRTL--INR 147 (472)
T ss_pred hhccccccCcHHHHHHHHH-hccccccCCCCCC----------------------ceEEEecCCchHHHHHHHHh--hcC
Confidence 4589999999999998887 333 12232222 24578999999999999876 557
Q ss_pred CCCEEEEcCCCCCCcHHHHhhcCcc-------------------------------------------------------
Q psy16707 274 GEKVIYVPTPTWGNHIPICKHTGLE------------------------------------------------------- 298 (420)
Q Consensus 274 ~gd~VlvpdP~w~ny~~i~~~aG~~------------------------------------------------------- 298 (420)
||.|+|-.++|+.-..-.+..|++
T Consensus 148 -gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~err 226 (472)
T KOG0634|consen 148 -GDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERR 226 (472)
T ss_pred -CCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHH
Confidence 999999999999887777777754
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 227 k~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~i 306 (472)
T KOG0634|consen 227 KKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWI 306 (472)
T ss_pred HHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEe
Confidence
Q ss_pred ----------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CcccCCC
Q psy16707 299 ----------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP-WNHITDQ 367 (420)
Q Consensus 299 ----------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~-w~~i~~q 367 (420)
...+-.+.+.|....|-||..+|.. -..+-|.+.+.+++.-|..||+.+.++|.+. .|.. ++..++.
T Consensus 307 t~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~-wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~ky-lp~~~~~~~~P~ 384 (472)
T KOG0634|consen 307 TGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKR-WGQEGFLRWIQHLRSSYTERRNALLSALDKY-LPKSVCEYHPPK 384 (472)
T ss_pred ecCHHHHHHHhhhcceeecCcccccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeEEecCC
Confidence 3334456778899999999887742 1223355667777799999999999999986 4554 7888999
Q ss_pred CceEEecCCC-------------HHHHHHHHHhCCeEEeCCC---------------cEEEcccCCCCHHHHHHHHHHH
Q psy16707 368 IGMFCYTGLN-------------ATQVEKLIKEHSVYLTKDG---------------RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 368 ~GmF~~~~l~-------------~~~v~~Ll~e~~Vy~~p~g---------------Ris~agl~~~ni~~la~AI~~v 418 (420)
.|||.|+.++ ++.+...+.|+||++++|- |+++|....++++.=.+-+..|
T Consensus 385 aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ 463 (472)
T KOG0634|consen 385 AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSV 463 (472)
T ss_pred cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHH
Confidence 9999998664 2455677889999999873 7777766665555444444433
No 111
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.10 E-value=2.6e-09 Score=108.56 Aligned_cols=180 Identities=16% Similarity=0.211 Sum_probs=127.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC
Q psy16707 196 DKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE 275 (420)
Q Consensus 196 ~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g 275 (420)
...|... +.++||+++++++ |. ++++| +.|.|+++++.+++..+ +.| |
T Consensus 53 ~~~Y~~~-~~~~lr~~ia~~~-~~-----~~~~I----------------------~~t~G~~~~l~~~~~~~--~~~-g 100 (364)
T PRK04781 53 TRRYPDP-QPPGLRSALAALY-GC-----APEQL----------------------LIGRGSDEAIDLLVRAL--CVP-G 100 (364)
T ss_pred hccCCCC-CHHHHHHHHHHHh-Cc-----ChHHE----------------------EEeCCHHHHHHHHHHHh--cCC-C
Confidence 4568755 4799999999976 32 34455 56999999999998755 347 7
Q ss_pred -CEEEEcCCCCCCcHHHHhhcCcc--------------------------------------------------------
Q psy16707 276 -KVIYVPTPTWGNHIPICKHTGLE-------------------------------------------------------- 298 (420)
Q Consensus 276 -d~VlvpdP~w~ny~~i~~~aG~~-------------------------------------------------------- 298 (420)
|.|++++|+|+.|...++..|++
T Consensus 101 ~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~ 180 (364)
T PRK04781 101 RDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQA 180 (364)
T ss_pred CCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHh
Confidence 89999999999999887766543
Q ss_pred -------------------------------------------------------------hhhhhhccCCCchHHHHHH
Q psy16707 299 -------------------------------------------------------------KILIRAFYSSPPIHGARIV 317 (420)
Q Consensus 299 -------------------------------------------------------------~~~~r~~~s~pp~~ga~iv 317 (420)
....+..| +.+..++.++
T Consensus 181 ~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~-~~~~~~~~~a 259 (364)
T PRK04781 181 LQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY-PVPTPCAALA 259 (364)
T ss_pred CCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC-CCCHHHHHHH
Confidence 11113333 3466677777
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-HHHHHHHHHhCCeEEeCC-
Q psy16707 318 QEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD- 395 (420)
Q Consensus 318 ~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~- 395 (420)
..+|++. .|... .+...+++++|+.+.+.|++++ + +..+.++.|+|.|+.++ .+++...+.++||.+.|+
T Consensus 260 ~~~l~~~----~~~~~-~~~~~~~~~~r~~l~~~L~~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~ 331 (364)
T PRK04781 260 EQALSAP----ALAVT-ARRVAEVRAERERLHAALAQLP--G-VRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVVRDQR 331 (364)
T ss_pred HHHHhcc----cHHHH-HHHHHHHHHHHHHHHHHHHhCC--C-CCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEeeCC
Confidence 7777663 23222 2333568999999999999873 1 44456788999998764 445544457899999774
Q ss_pred ------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707 396 ------G--RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 396 ------g--Ris~agl~~~ni~~la~AI~~v 418 (420)
+ ||+++ +.+..+++.+|++++
T Consensus 332 ~~~~~~~~~Ris~~--~~~~~~~l~~al~~~ 360 (364)
T PRK04781 332 AAPRLSDALRITLG--TPEQNDRVLAALQRT 360 (364)
T ss_pred CCCCCCCeEEEeCC--CHHHHHHHHHHHHHH
Confidence 1 99987 467788999999875
No 112
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.06 E-value=1e-08 Score=103.40 Aligned_cols=198 Identities=15% Similarity=0.214 Sum_probs=134.6
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.|||+..+ +|-| ++++.+.. .. ...|+.. - .+||+++++++ |.. .+++|
T Consensus 24 ~~~i~ls~Ne--np~~--~~~~~~~~--~~------~~~Yp~~-~-~~L~~~ia~~~-~~~----~~~~I---------- 74 (339)
T PRK06959 24 DAWLDLSTGI--NPHG--YPVPPVPA--DA------WRRLPED-D-DGLAACAARYY-GAP----DAAHV---------- 74 (339)
T ss_pred hhhceeccCC--CCCC--CCCCCCCH--HH------HHhCCCc-h-HHHHHHHHHHh-CCC----CcccE----------
Confidence 3569999887 4544 22122211 11 2347643 3 89999999966 432 13445
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|+++++.+...+ +.| |+ |++++|+|+.|...++.+|++
T Consensus 75 ------------~i~~Gs~e~i~~l~~~---~~~-g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~~~~v~l~ 137 (339)
T PRK06959 75 ------------LPVAGSQAAIRALPAL---LPR-GR-VGIAPLAYSEYAPAFARHGHRVVPLDEAADTLPAALTHLIVV 137 (339)
T ss_pred ------------EECcCHHHHHHHHHHh---cCC-Ce-EEEcCCCcHHHHHHHHHCCCEEEeecccchhccccCCEEEEe
Confidence 5699999999876543 346 66 889999999999999988875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 138 nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li 217 (339)
T PRK06959 138 NPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALL 217 (339)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecCHHHH
Confidence
Q ss_pred --hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC
Q psy16707 299 --KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 376 (420)
Q Consensus 299 --~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l 376 (420)
....+..|+ .+...|.++..+|++ .+|.+ .++++++++|+.+.+.|+++| +... ..|+|.|+.+
T Consensus 218 ~~l~~~~~~~~-vs~~~q~a~~~~L~~----~~~~~---~~~~~~~~~r~~l~~~L~~~g----~~~~--~~~~f~~~~~ 283 (339)
T PRK06959 218 AALRDALGAWT-VSGPARHAVRAAFAD----AAWQA---AMRERLAADGARLAALLRAHG----FAVH--ATPLFSWTDD 283 (339)
T ss_pred HHHHHhcCCCC-CcHHHHHHHHHHhCc----HHHHH---HHHHHHHHHHHHHHHHHHHCC----CCcc--CcceEEEEeC
Confidence 111233444 356778888887876 35544 455899999999999999987 4333 3689999876
Q ss_pred C-HHHH-HHHHHhCCeEEeCC-----CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 377 N-ATQV-EKLIKEHSVYLTKD-----GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 377 ~-~~~v-~~Ll~e~~Vy~~p~-----gRis~agl~~~ni~~la~AI~~vv 419 (420)
+ .+.+ +.| .++||.+..- -||++++ +.+..+++.+++++++
T Consensus 284 ~~~~~l~~~l-~~~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~~ 331 (339)
T PRK06959 284 PRAAALHAAL-ARRGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAECV 331 (339)
T ss_pred CCHHHHHHHH-HhCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHH
Confidence 3 3344 555 6789999642 2999853 4567889999988764
No 113
>PRK08354 putative aminotransferase; Provisional
Probab=99.04 E-value=2.3e-08 Score=99.40 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=69.0
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.|||+.|+ + . ..++.++++...... ..+.|+. ...+++++++++ |. +|
T Consensus 8 ~~~i~l~~~~--n--p--~~p~~~~~a~~~~~~--~~~~yp~---~~~l~~~ia~~~-~~--------~I---------- 57 (311)
T PRK08354 8 EGLIDFSASV--N--P--YPPEWLDEMFERAKE--ISGRYTY---YEWLEEEFSKLF-GE--------PI---------- 57 (311)
T ss_pred cceeEecCCC--C--C--CCCHHHHHHHHHHHH--HhhcCCC---hHHHHHHHHHHH-CC--------CE----------
Confidence 4689999995 2 2 234677777766543 2456753 467899999875 31 23
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.|.|+++++.+.+.++ .| ||+|++++|+|+.|..+++..|++
T Consensus 58 ------------~vt~G~~~al~~~~~~~---~~-gd~vlv~~P~y~~~~~~~~~~g~~ 100 (311)
T PRK08354 58 ------------VITAGITEALYLIGILA---LR-DRKVIIPRHTYGEYERVARFFAAR 100 (311)
T ss_pred ------------EECCCHHHHHHHHHHhh---CC-CCeEEEeCCCcHHHHHHHHHcCCE
Confidence 67999999999877533 37 899999999999999999999875
No 114
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.00 E-value=1.3e-08 Score=102.02 Aligned_cols=82 Identities=17% Similarity=0.117 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-C-HHHHHHHHHhCCeEEeCC--------C--cE
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-N-ATQVEKLIKEHSVYLTKD--------G--RI 398 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~-~~~v~~Ll~e~~Vy~~p~--------g--Ri 398 (420)
...++.+++.++++|+.+.+.|++.| |..+.++.|+|+|+.+ + .++++.|+ ++||.+.|+ + ||
T Consensus 238 ~~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~g~f~~~~~~~~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRi 312 (332)
T PRK06425 238 DYVAKHSLDIMENERSYLINNLEAMG----FRAAGDPSANFITFMIPDAHDFYSYLL-KNGILVRLLDDYECLGEQYIRI 312 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC----CEECCCCCceEEEEEcCCHHHHHHHHH-HCCeEEEECCCCCCCCCCEEEE
Confidence 34456778999999999999999886 6655566789998765 3 35556775 579999874 1 89
Q ss_pred EEcccCCCCHHHHHHHHHHHh
Q psy16707 399 SMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~agl~~~ni~~la~AI~~vv 419 (420)
+++ +.+..+++.+|+.+++
T Consensus 313 s~~--~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 313 AIR--RRSFNIKLVNALRNFL 331 (332)
T ss_pred EeC--CHHHHHHHHHHHHHHh
Confidence 987 4578889999998764
No 115
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=98.97 E-value=3.4e-08 Score=103.38 Aligned_cols=104 Identities=14% Similarity=0.081 Sum_probs=72.8
Q ss_pred HccCCCCceeecccccccCCCCCCch---HHH-HHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCcee
Q psy16707 155 KKDTNVNKINLGVGAYRDDQGKPYVL---PSV-KQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLIS 230 (420)
Q Consensus 155 ~~d~~~~kInL~iG~y~d~dg~~~~~---~~V-~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~ 230 (420)
-++.+.+.++|..|. +--++.+. ..+ .++...+. . .+..|++..|.++|++++++++ |.. .+
T Consensus 6 l~~~g~n~~~l~~~~---v~iDlltds~t~ams~~~~~a~~-~-gd~~Y~~~~g~~~Leeaia~~~-g~~-------~v- 71 (431)
T cd00617 6 LKEAGYNVFLLRSED---VYIDLLTDSGTGAMSDYQWAAMM-L-GDEAYAGSKSFYDLEDAVQDLF-GFK-------HI- 71 (431)
T ss_pred HHHcCCCEEeCCCCC---cCCCCCCCCCcHHHHHHHHHHHH-h-CCCccCCCCCHHHHHHHHHHHH-CCC-------eE-
Confidence 345677889999884 30112222 233 22233332 2 4456999999999999999976 542 22
Q ss_pred eecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 231 IVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
+.|.|||.|+.+++..+ +.| ||+| +|+|+|+.|...+..+|+
T Consensus 72 ---------------------v~t~~Gt~Al~la~~al--~~p-GD~V-~~~~~f~~~~~~i~~~Ga 113 (431)
T cd00617 72 ---------------------IPTHQGRGAENILFSIL--LKP-GRTV-PSNMHFDTTRGHIEANGA 113 (431)
T ss_pred ---------------------EEcCCHHHHHHHHHHHh--CCC-CCEE-ccCCcccchHHHHHhCCC
Confidence 67999999999987644 568 9988 799999999888777764
No 116
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=98.95 E-value=1e-07 Score=97.46 Aligned_cols=208 Identities=16% Similarity=0.161 Sum_probs=150.5
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
++.|+|+..+ +|-| +++.++++...... ..+.|+.. ...++++++++++-+. .+++|
T Consensus 22 ~~~i~LssNe--nP~g---p~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~~~-----~~~~V---------- 78 (356)
T COG0079 22 PGIIKLSSNE--NPYG---PPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYGVV-----DPENV---------- 78 (356)
T ss_pred ccceeecCCC--CCCC---CCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhCCC-----CcceE----------
Confidence 3689999885 2322 33666666665543 46788766 8999999999977432 24555
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.+.|.++.+.+....+ +.| ||+|+++.|+|+-|...++.+|++
T Consensus 79 ------------~~gnGsde~i~~l~~~~--~~~-gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~ 143 (356)
T COG0079 79 ------------LVGNGSDELIELLVRAF--VEP-GDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIR 143 (356)
T ss_pred ------------EEcCChHHHHHHHHHHh--hcC-CCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhh
Confidence 56999999999998865 447 899999999999999999999864
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 144 ~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy 223 (356)
T COG0079 144 DKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGY 223 (356)
T ss_pred cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceee
Confidence
Q ss_pred ----------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707 299 ----------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI 368 (420)
Q Consensus 299 ----------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~ 368 (420)
...+|.-|+. +..++.++...|.|. +++++.++++..-|+.+.+.|+++|. ..+.+..
T Consensus 224 ~ia~~~~i~~l~~vr~p~~v-~~~a~~aa~aal~~~-------~~~~~~~~~~~~~r~rl~~~l~~~~~----~~v~pS~ 291 (356)
T COG0079 224 AIANPELIAALNKVRPPFNV-SSPALAAAIAALRDA-------DYLEESVERIREERERLYAALKALGL----FGVFPSQ 291 (356)
T ss_pred ccCCHHHHHHHHHhcCCCCC-CHHHHHHHHHHcccH-------HHHHHHHHHHHHHHHHHHHHHHhCCC----CeecCCC
Confidence 3344666665 666777777667652 45566668999999999999999872 3244455
Q ss_pred ceEEecCCC---HHHHHHHHHhCCeEEeCC---------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 369 GMFCYTGLN---ATQVEKLIKEHSVYLTKD---------GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 369 GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~---------gRis~agl~~~ni~~la~AI~~vv 419 (420)
+-|.++..+ ...+...+.++||.+-.. -||++. ..++| +.+.+|+.+++
T Consensus 292 aNFvlv~~~~~~~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg-t~een-~~ll~AL~~~~ 352 (356)
T COG0079 292 ANFVLVRVPDAEAAALAEALLKKGILVRDCSSVGLLPGYLRITVG-TPEEN-DRLLAALREVL 352 (356)
T ss_pred CcEEEEECCCccHHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC-CHHHH-HHHHHHHHHHH
Confidence 889987664 224444446779998432 299986 55555 99999999875
No 117
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=98.93 E-value=4.7e-08 Score=99.89 Aligned_cols=83 Identities=17% Similarity=0.290 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-CCCCceEEecCC-----CHHHHHHHHHhCCeEEeC------------
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYTGL-----NATQVEKLIKEHSVYLTK------------ 394 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i-~~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p------------ 394 (420)
+.+..+++++++|+.+.+.|++.| |..+ .++.++|.|+.+ +.+++..+++++||++.+
T Consensus 276 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~ 351 (402)
T cd00378 276 EFKAYAKQVVENAKALAEALKERG----FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFV 351 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC----CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCC
Confidence 455666889999999999999887 5544 346788888644 346666677899999952
Q ss_pred --CCcEEEccc-----CCCCHHHHHHHHHHHh
Q psy16707 395 --DGRISMAGV-----TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 --~gRis~agl-----~~~ni~~la~AI~~vv 419 (420)
+-||++..+ +.+++++++++|.+++
T Consensus 352 ~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 352 PSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred CCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 128888765 4899999999999865
No 118
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=98.93 E-value=5.3e-08 Score=98.47 Aligned_cols=176 Identities=16% Similarity=0.180 Sum_probs=120.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC
Q psy16707 196 DKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE 275 (420)
Q Consensus 196 ~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g 275 (420)
...|+.. -..+++++++++ +|. ++++| +.|.|+++++.+++..+ +.| |
T Consensus 51 ~~~Yp~~-~~~~l~~~~a~~-~g~-----~~~~I----------------------~~~~Gs~e~i~~~~~~~--~~~-g 98 (351)
T PRK01688 51 LNRYPEC-QPKAVIENYAAY-AGV-----KPEQV----------------------LVSRGADEGIELLIRAF--CEP-G 98 (351)
T ss_pred cccCCCC-ChHHHHHHHHHH-hCC-----CHHHE----------------------EEcCCHHHHHHHHHHHh--cCC-C
Confidence 4567544 348999999987 453 34555 56999999999998755 346 6
Q ss_pred -CEEEEcCCCCCCcHHHHhhcCcc--------------------------------------------------------
Q psy16707 276 -KVIYVPTPTWGNHIPICKHTGLE-------------------------------------------------------- 298 (420)
Q Consensus 276 -d~VlvpdP~w~ny~~i~~~aG~~-------------------------------------------------------- 298 (420)
|.|++++|+|+.|...++..|++
T Consensus 99 ~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~ 178 (351)
T PRK01688 99 KDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKA 178 (351)
T ss_pred CCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc
Confidence 89999999999999999888864
Q ss_pred --------------------------------------------------hhh------hhhccCCCchHHHHHHHHHhC
Q psy16707 299 --------------------------------------------------KIL------IRAFYSSPPIHGARIVQEILG 322 (420)
Q Consensus 299 --------------------------------------------------~~~------~r~~~s~pp~~ga~iv~~IL~ 322 (420)
..+ .+..|+ .+...+.++..+|.
T Consensus 179 ~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~~-v~~~~~~~a~~~L~ 257 (351)
T PRK01688 179 IVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYP-LSTPVADIAAQALS 257 (351)
T ss_pred EEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCCC-CCHHHHHHHHHHHh
Confidence 111 122233 34455655655565
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCC-----
Q psy16707 323 DPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKD----- 395 (420)
Q Consensus 323 dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~----- 395 (420)
+.. .+.++..++.+.+.|+.+.+.|++++. +..+.++.|.|.|+.++ ++..++|+ ++||.+.+.
T Consensus 258 ~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~ps~~nfi~~~~~~~~~l~~~L~-~~gi~vr~~~~~~~ 328 (351)
T PRK01688 258 PQG-----IAAMRERVAEINANRQWLIAALKEIPC---VEQVFDSETNYILARFTASSAVFKSLW-DQGIILRDQNKQPG 328 (351)
T ss_pred cch-----HHHHHHHHHHHHHHHHHHHHHHHhCCC---CCeECCCCCcEEEEEcCCHHHHHHHHH-HCCeEEEECCCcCC
Confidence 421 133455557788889999999988742 44355678999997654 34456664 789999642
Q ss_pred --C--cEEEcccCCCCHHHHHHHH
Q psy16707 396 --G--RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 396 --g--Ris~agl~~~ni~~la~AI 415 (420)
+ ||++. +.+..+.+.++|
T Consensus 329 ~~~~iRis~~--~~~e~~~l~~al 350 (351)
T PRK01688 329 LSNCLRITIG--TREECQRVIDAL 350 (351)
T ss_pred CCCeEEEeCC--CHHHHHHHHHhh
Confidence 1 99987 457788888776
No 119
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=98.91 E-value=1.5e-07 Score=95.76 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=71.5
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC---CC----HHHHHHHHHHHcCCCCccccCCcee
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII---GA----PDFGKLAAQLAYGEDCPQLKDNLIS 230 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~---G~----~~fr~a~~~~~~g~~~~~~~~~~i~ 230 (420)
.+.+.||++.|.|. | ....|.|+++......+ ....|.+.. |. +++++++++++ |.+ .+
T Consensus 36 ~g~~~i~~~~~~~l---g-~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le~~ia~~~-g~~-------~~- 101 (393)
T TIGR01822 36 DGREVLNFCANNYL---G-LSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELEAKIAAFL-GTE-------DT- 101 (393)
T ss_pred CCceEEEeeCCCcc---c-cCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHHHHHHHHh-CCC-------cE-
Confidence 34578999999875 4 33455555555554433 234777777 97 88999999876 332 12
Q ss_pred eecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 231 IVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
+.+.||+.|+..++..+ +.| ||.|++++|+|+.+...++.++.
T Consensus 102 ---------------------ii~~~~~~a~~~~~~~l--~~~-gd~vi~~~~~~~s~~~~~~~~~~ 144 (393)
T TIGR01822 102 ---------------------ILYASCFDANGGLFETL--LGA-EDAIISDALNHASIIDGVRLCKA 144 (393)
T ss_pred ---------------------EEECchHHHHHHHHHHh--CCC-CCEEEEeccccHHHHHHHHhcCC
Confidence 55789998888766544 567 99999999999999887666543
No 120
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=98.89 E-value=1.4e-07 Score=95.62 Aligned_cols=80 Identities=18% Similarity=0.285 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-CC---CHHHHHHHHHhCCeEEeCC-------C----cEE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-GL---NATQVEKLIKEHSVYLTKD-------G----RIS 399 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-~l---~~~~v~~Ll~e~~Vy~~p~-------g----Ris 399 (420)
+.++++++++|+.+.+.|++.| |+......++|.+. +- +.++++.|+++ ||.+.++ + ||+
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~ 370 (397)
T PRK06939 296 DELRDRLWENARYFREGMTAAG----FTLGPGEHPIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQ 370 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEE
Confidence 4677899999999999999887 44444445555432 21 23556777655 9998642 1 888
Q ss_pred Ecc-cCCCCHHHHHHHHHHHh
Q psy16707 400 MAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 400 ~ag-l~~~ni~~la~AI~~vv 419 (420)
++. .+++.++++.++|++++
T Consensus 371 ~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 371 MSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred ECCCCCHHHHHHHHHHHHHHH
Confidence 875 68888999999988775
No 121
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.77 E-value=3.5e-08 Score=89.44 Aligned_cols=115 Identities=14% Similarity=0.169 Sum_probs=78.8
Q ss_pred ccCCChHHHHHHHHHccC-----CC-Cceeecccc----------cc--cCCCCCCchHHHHHHHHHHHccCCCCCCCCC
Q psy16707 141 SVKVPSSNLLTEAFKKDT-----NV-NKINLGVGA----------YR--DDQGKPYVLPSVKQADEIVLNKNLDKEYAPI 202 (420)
Q Consensus 141 ~~~~d~i~~l~~~~~~d~-----~~-~kInL~iG~----------y~--d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~ 202 (420)
+....|.|.--+++.+++ ++ .+|+||+-+ |. +++.++.+++.|.++...+ ..|.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~ 91 (153)
T PLN02994 18 HGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDY 91 (153)
T ss_pred CCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCC
Confidence 445667777777777764 33 366666652 11 1224455666655544443 349999
Q ss_pred CCCHHHHHHHHHHHcCCCC--ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707 203 IGAPDFGKLAAQLAYGEDC--PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV 280 (420)
Q Consensus 203 ~G~~~fr~a~~~~~~g~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv 280 (420)
.|.++||+|+++++-...+ ..+++++| +.|.|++.++.+++..| +.| ||.|+|
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~I----------------------vvt~Ga~~al~~l~~~l--~dp-GD~VlV 146 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKFDADMI----------------------VLSAGATAANEIIMFCI--ADP-GDAFLV 146 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCccchhhe----------------------EEcCCHHHHHHHHHHHH--cCC-CCEEEE
Confidence 9999999999999944332 22445555 67999999999988755 558 999999
Q ss_pred cCCCCC
Q psy16707 281 PTPTWG 286 (420)
Q Consensus 281 pdP~w~ 286 (420)
|+|+|+
T Consensus 147 p~P~Y~ 152 (153)
T PLN02994 147 PTPYYA 152 (153)
T ss_pred eCCCCC
Confidence 999997
No 122
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=98.69 E-value=1.8e-06 Score=87.51 Aligned_cols=107 Identities=14% Similarity=0.033 Sum_probs=70.0
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGI 235 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~ 235 (420)
.+.+.|||+.|.+. | .+..+.++++......+. ....|.+..|.+++++++++++....+. ++.
T Consensus 31 ~g~~~id~~~~~~~---g-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~------- 96 (385)
T TIGR01825 31 NGKEVINLSSNNYL---G-FADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAA------- 96 (385)
T ss_pred CCceEEEeeccCcc---C-CCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcE-------
Confidence 35678999998532 3 445556655555544321 2346888999999999999988432211 121
Q ss_pred CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
+..++|+.+...++..+ +.| ||.|++++|+|+++...++..|.
T Consensus 97 ----------------i~~~sG~~a~~~a~~~~--~~~-gd~vi~~~~~~~~~~~~~~~~g~ 139 (385)
T TIGR01825 97 ----------------LVFQSGFNTNQGVLSAL--LRK-GDIVLSDELNHASIIDGLRLTKA 139 (385)
T ss_pred ----------------EEECcHHHHHHHHHHHh--CCC-CCEEEEEccccHHHHHHHHhcCC
Confidence 23445576666555433 557 99999999999999877666654
No 123
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=98.64 E-value=2.3e-06 Score=85.21 Aligned_cols=77 Identities=17% Similarity=0.341 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeC-------CC----
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTK-------DG---- 396 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p-------~g---- 396 (420)
+.+.++++++++|+.+.+.|+++| +... ++.|.|.|+.++ . ++.++| .++||++.+ .|
T Consensus 266 ~~~~~~~~~~~~~~~l~~~L~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~i 339 (360)
T TIGR00858 266 EEPWRREKLLALIARLRAGLEALG----FTLM-PSCTPIVPVIIGDNASALALAEEL-QQQGIFVGAIRPPTVPAGTSRL 339 (360)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHcC----CccC-CCCCCEEEEEeCCHHHHHHHHHHH-HHCCeeEeeeCCCCCCCCCceE
Confidence 345677899999999999999876 4433 456777765442 2 455666 577999964 12
Q ss_pred cEEEcc-cCCCCHHHHHHHH
Q psy16707 397 RISMAG-VTSKNVGYLAKAI 415 (420)
Q Consensus 397 Ris~ag-l~~~ni~~la~AI 415 (420)
||++.. .+.++++.+.++|
T Consensus 340 Ris~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 340 RLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred EEEEcCCCCHHHHHHHHHhh
Confidence 899885 3777888888775
No 124
>PLN02721 threonine aldolase
Probab=98.58 E-value=2.8e-06 Score=84.71 Aligned_cols=74 Identities=16% Similarity=0.250 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCcc-cCCCCceEEecC------CCH-HHHHHHHHhCCeEEeCCC----cEEEc-ccCCCCH
Q psy16707 342 ISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTG------LNA-TQVEKLIKEHSVYLTKDG----RISMA-GVTSKNV 408 (420)
Q Consensus 342 ~~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~~------l~~-~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni 408 (420)
.++++.+.+.|++++. +.. +.++.+.|.|+. .+. +++++| .++||++.|++ ||++. ..+.+++
T Consensus 264 ~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gi~v~~~~~~~lR~~~~~~~~~~~i 339 (353)
T PLN02721 264 HKKAKLLAEGLNQIKG---LRVNVAAVETNIVYFDITDGSRITAEKLCKSL-EEHGVLLMPGNSSRIRVVTHHQISDSDV 339 (353)
T ss_pred HHHHHHHHHHHHhCCC---cEEecCCccceEEEEEccCCccccHHHHHHHH-HhCCcEEecCCCceEEEEecCcCCHHHH
Confidence 4567788999987731 321 333444556532 233 445677 59999999876 99986 6799999
Q ss_pred HHHHHHHHHHh
Q psy16707 409 GYLAKAIHAVT 419 (420)
Q Consensus 409 ~~la~AI~~vv 419 (420)
+++.+++.+++
T Consensus 340 ~~~~~~l~~~~ 350 (353)
T PLN02721 340 QYTLSCFQQAA 350 (353)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 125
>PLN02822 serine palmitoyltransferase
Probab=98.50 E-value=3.9e-06 Score=89.05 Aligned_cols=81 Identities=14% Similarity=0.213 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC-------------HHHHHHHHHhCCeEEeCC-----
Q psy16707 335 KGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN-------------ATQVEKLIKEHSVYLTKD----- 395 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~-------------~~~v~~Ll~e~~Vy~~p~----- 395 (420)
..++++++++++.|.+.|++. | |....++.+.+.++.++ .+++++|++++||+++|+
T Consensus 367 ~~~~~~l~~~~~~l~~~L~~~~g----~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~ 442 (481)
T PLN02822 367 PSVLAKLKENIALLHKGLSDIPG----LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTL 442 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC----cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCc
Confidence 456789999999999999886 5 44444456666654331 356789988999999964
Q ss_pred --------CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 396 --------GRISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --------gRis~ag-l~~~ni~~la~AI~~vv 419 (420)
.||+++. .++++|++++++|.+++
T Consensus 443 ~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~ 475 (481)
T PLN02822 443 DKCRLPVGIRLFVSAGHTESDILKASESLKRVA 475 (481)
T ss_pred CCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 4887664 58899999999998864
No 126
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=98.49 E-value=1e-05 Score=82.35 Aligned_cols=78 Identities=17% Similarity=0.218 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC-------C--cEEEc
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD-------G--RISMA 401 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~-------g--Ris~a 401 (420)
+.+++.++++++.+.+.++.+ ...+.+.| |.|..++ .+++..+++++||.+.|+ | ||+++
T Consensus 253 ~~~~~~l~~r~~~~~~~l~~~------~~~~~~~~-f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~ 325 (346)
T TIGR03576 253 SRIRDAFKRKEEVYLRLFDKL------NVERTPTG-FVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLA 325 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHhC------CCCcCCCe-EEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEe
Confidence 355678888888888777633 33344555 7876543 478889999999999983 2 99998
Q ss_pred ccCCC---CHHHHHHHHHHHhC
Q psy16707 402 GVTSK---NVGYLAKAIHAVTK 420 (420)
Q Consensus 402 gl~~~---ni~~la~AI~~vv~ 420 (420)
. .++ ..+++.++|++.++
T Consensus 326 ~-~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 326 A-KDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred c-ChHHhcCHHHHHHHHHhccC
Confidence 3 332 68999999987653
No 127
>PRK10534 L-threonine aldolase; Provisional
Probab=98.48 E-value=6.2e-06 Score=82.15 Aligned_cols=72 Identities=13% Similarity=0.216 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCCC--cEEEc-ccCCCCHHHHHHHHH
Q psy16707 343 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKDG--RISMA-GVTSKNVGYLAKAIH 416 (420)
Q Consensus 343 ~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~g--Ris~a-gl~~~ni~~la~AI~ 416 (420)
+.|+.+.+.|+++| |...++ .|.|.|+.++ .+++.+++++.||.+.|+. |++.+ .++.+.++++.++++
T Consensus 254 ~~r~~l~~~L~~~g----~~~~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~l~ 328 (333)
T PRK10534 254 DNAAWLAEQLREAG----ADVMRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAHWR 328 (333)
T ss_pred HHHHHHHHHHHhCC----CccCCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHHHH
Confidence 35778999999988 554444 6899987653 4566677789999999876 77764 578889999999998
Q ss_pred HHh
Q psy16707 417 AVT 419 (420)
Q Consensus 417 ~vv 419 (420)
+.+
T Consensus 329 ~~~ 331 (333)
T PRK10534 329 AFL 331 (333)
T ss_pred HHh
Confidence 764
No 128
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=98.43 E-value=2.5e-05 Score=80.00 Aligned_cols=102 Identities=15% Similarity=0.077 Sum_probs=67.0
Q ss_pred ccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCC-------CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPII-------GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS 240 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~-------G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 240 (420)
.|.|..+-.+.++.|.++....... ..+..|.+.. .++++|+++++++ |.. .++.|
T Consensus 18 iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~----~~~~i----------- 81 (398)
T TIGR03392 18 VYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL-NAP----DAENI----------- 81 (398)
T ss_pred EEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh-CCC----CCCeE-----------
Confidence 5666666667888888888776532 2222333322 2466889998865 532 12334
Q ss_pred cccccccccceeecccchHHHHHHHHHHH--hcCCCCCEEEEcCCCCCC----cHHHHhhcCcc
Q psy16707 241 LRVGAAFQISIVQGISGTGSLRVGAAFLK--NFFPGEKVIYVPTPTWGN----HIPICKHTGLE 298 (420)
Q Consensus 241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~--~~~p~gd~VlvpdP~w~n----y~~i~~~aG~~ 298 (420)
+.|.|+|.++.+++..+. .+.| ||.|++++|+|+. +..+++..|++
T Consensus 82 -----------~~t~g~t~~l~~~~~~~~~~~~~~-gd~Vl~~~~~~~s~~~~~~~~~~~~g~~ 133 (398)
T TIGR03392 82 -----------VWTRGTTESINLVAQSYARPRLQP-GDEIIVSEAEHHANLIPWLMVAQQTGAK 133 (398)
T ss_pred -----------EEeCChHHHHHHHHHHhhhccCCC-CCEEEECCcchhHHHHHHHHHHHHcCcE
Confidence 568999999999886553 2457 8999999999876 34455666664
No 129
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=98.39 E-value=1.7e-05 Score=80.74 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=69.2
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCC-----CCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAP-----IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG 234 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p-----~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~ 234 (420)
.++++|++|. ....+++.|.++..++ . ..+.|+| ..|.+++++++++++-...+. +.+.+.
T Consensus 20 ~~~~~l~~g~-----~~~~~p~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~---- 85 (398)
T cd00613 20 QSMSFLGSGT-----YKHNPPAVIKRNILEN-E--FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANAS---- 85 (398)
T ss_pred cCcccccccc-----cCCcCcHHHHHHhccc-c--CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--Ccccee----
Confidence 3559999997 3468888888876665 2 3456777 899999999999988322211 122332
Q ss_pred cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707 235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG 296 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG 296 (420)
+.+.||+++...+...+..-.+ ||+|++++|.|+.|...+..+|
T Consensus 86 -----------------~~~~g~~~~~~~~~~~~~~~~~-gd~Vl~~~~~h~~~~~~~~~~~ 129 (398)
T cd00613 86 -----------------LQDEATAAAEAAGLAAIRAYHK-RNKVLVPDSAHPTNPAVARTRG 129 (398)
T ss_pred -----------------ccCchHHHHHHHHHHHHhcccC-CCEEEEcCccCcchHHHHHHhc
Confidence 2333554554333332222123 8999999999999998888776
No 130
>PLN02483 serine palmitoyltransferase
Probab=98.39 E-value=6.7e-06 Score=87.46 Aligned_cols=107 Identities=12% Similarity=0.028 Sum_probs=71.3
Q ss_pred CCCceeecccccccCC-CCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707 159 NVNKINLGVGAYRDDQ-GKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGI 235 (420)
Q Consensus 159 ~~~kInL~iG~y~d~d-g~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~ 235 (420)
....+|++-=.|..=. .++.+.+.|.+|.+..-.. ..-..|.+..+..++++++++++- .. +.
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~------~a------- 164 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KP------AA------- 164 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CC------cE-------
Confidence 3567898877776443 2345677888887765321 123458888899999999999874 22 21
Q ss_pred CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+...+|..+...++..+ +.| ||.|++++|+|+++...++.+|++
T Consensus 165 ----------------i~~~~G~~an~~~i~al--~~~-Gd~Vi~d~~~h~s~~~~~~~~Ga~ 208 (489)
T PLN02483 165 ----------------IVFGMGYATNSTIIPAL--IGK-GGLIISDSLNHNSIVNGARGSGAT 208 (489)
T ss_pred ----------------EEECCHHHHHHHHHHHh--CCC-CCEEEEcchhhHHHHHHHHHcCCe
Confidence 33445555544433323 457 999999999999998777666654
No 131
>KOG0258|consensus
Probab=98.38 E-value=1.4e-05 Score=81.61 Aligned_cols=191 Identities=15% Similarity=0.188 Sum_probs=142.7
Q ss_pred CchHHHHHHHHHHHccC-CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeeccc
Q psy16707 178 YVLPSVKQADEIVLNKN-LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGIS 256 (420)
Q Consensus 178 ~~~~~V~~a~~~~~~~~-~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~g 256 (420)
.+.+++++|...+..-. ..-.|....|++-.|+.+|++.-.+|+-.-+++.| ..|.|
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI----------------------~LT~G 144 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDI----------------------FLTTG 144 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHe----------------------eecCC
Confidence 56788888877664323 34589999999999999999998877643455545 67999
Q ss_pred chHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------------------------
Q psy16707 257 GTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------------------------- 298 (420)
Q Consensus 257 Gtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------------------------- 298 (420)
++.|++..+.++.. .+ .+-|+||-|.||-|...+.+.|+.
T Consensus 145 AS~ai~~il~l~~~-~~-~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvI 222 (475)
T KOG0258|consen 145 ASPAIRSILSLLIA-GK-KTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVI 222 (475)
T ss_pred CcHHHHHHHHHHhc-CC-CCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEE
Confidence 99999999887754 24 789999999999999988888875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 223 NPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gEC 302 (475)
T KOG0258|consen 223 NPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGEC 302 (475)
T ss_pred CCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeee
Confidence
Q ss_pred -------------------hhhhhhccCCCchHHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy16707 299 -------------------KILIRAFYSSPPIHGARIVQEILGDPK----LKAQWLTEVKGMADRIISMRQSLKDNLQKE 355 (420)
Q Consensus 299 -------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~----L~~~w~~el~~m~~r~~~~R~~l~~~L~~~ 355 (420)
....-+.--||+..||..+....+-|. -..+|.+|.+.+...+++|...+.+.+..+
T Consensus 303 G~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~ 382 (475)
T KOG0258|consen 303 GQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL 382 (475)
T ss_pred cccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc
Confidence 111122234678888887776665543 446788898888888888888999998876
Q ss_pred CCCCCCcccCCCCceEEec---------------CCC-HHH-HHHHHHhCCeEEeCC
Q psy16707 356 GSNKPWNHITDQIGMFCYT---------------GLN-ATQ-VEKLIKEHSVYLTKD 395 (420)
Q Consensus 356 g~~~~w~~i~~q~GmF~~~---------------~l~-~~~-v~~Ll~e~~Vy~~p~ 395 (420)
.. ...-+.|+.||.|- ++. ++| +.+|++..||-++||
T Consensus 383 ~g---i~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPG 436 (475)
T KOG0258|consen 383 EG---ISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPG 436 (475)
T ss_pred Cc---eeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecC
Confidence 42 34456678888872 221 244 589999999999997
No 132
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=98.36 E-value=3.6e-05 Score=78.89 Aligned_cols=99 Identities=17% Similarity=0.105 Sum_probs=66.6
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC-----------CCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII-----------GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~-----------G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
.|.|..+..+.++.|.++......+. ...|.. .++++|+++++++ |.. +++.|
T Consensus 21 ~yld~a~~~~~~~~v~~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~----~~~~i-------- 84 (401)
T PRK10874 21 VYLDSAATALKPQAVIEATQQFYSLS---AGNVHRSQFAAAQRLTARYEAAREQVAQLL-NAP----DAKNI-------- 84 (401)
T ss_pred EEEeCCcccCCCHHHHHHHHHHHHhc---cCCCCCcccHHHHHHHHHHHHHHHHHHHHc-CCC----CCCEE--------
Confidence 57777777788889998887776431 112222 2567888888865 432 13334
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHH--hcCCCCCEEEEcCCCCCC----cHHHHhhcCcc
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLK--NFFPGEKVIYVPTPTWGN----HIPICKHTGLE 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~--~~~p~gd~VlvpdP~w~n----y~~i~~~aG~~ 298 (420)
+.|.|+|.++.+++..+. .+.| ||.|++++|.|++ +....+..|++
T Consensus 85 --------------~~~~~~t~~i~~~~~~~~~~~~~~-gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 136 (401)
T PRK10874 85 --------------VWTRGTTESINLVAQSYARPRLQP-GDEIIVSEAEHHANLVPWLMVAQQTGAK 136 (401)
T ss_pred --------------EEECCHHHHHHHHHHHhhhccCCC-cCEEEECCcchHHHHHHHHHHHHHhCCE
Confidence 568999999999886553 2356 8999999999876 34445556664
No 133
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=98.36 E-value=4.8e-05 Score=77.82 Aligned_cols=83 Identities=13% Similarity=0.223 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-----CCceEEec--CCCHHHHHHHHHhCCeEEeCC-----------
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-----QIGMFCYT--GLNATQVEKLIKEHSVYLTKD----------- 395 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-----q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p~----------- 395 (420)
++.+++++.+.++.+.+.|++++. |+.+.+ +.|++.+. +.+..++..+++++||++.++
T Consensus 293 ~~~~~~~~~~l~~~l~~~l~~~~g---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~ 369 (403)
T TIGR01979 293 LENIEAHEHELTAYALERLGEIPG---LRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRF 369 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHh
Confidence 566778899999999999987631 554433 25676653 455556656668999998642
Q ss_pred -----CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 396 -----GRISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -----gRis~agl-~~~ni~~la~AI~~vv 419 (420)
-|||+... +.+++++++++|.+++
T Consensus 370 ~~~~~iRiS~~~~~t~~di~~l~~~l~~~~ 399 (403)
T TIGR01979 370 GVPATCRASFYIYNTEEDIDALVEALKKVR 399 (403)
T ss_pred CCCCEEEEEeccCCCHHHHHHHHHHHHHHH
Confidence 29998744 5689999999998875
No 134
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=98.36 E-value=3.3e-05 Score=77.45 Aligned_cols=83 Identities=17% Similarity=0.215 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---CceEEecC----CCH-HHHHHHHHhCCeEEeCC------C--c
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMFCYTG----LNA-TQVEKLIKEHSVYLTKD------G--R 397 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~GmF~~~~----l~~-~~v~~Ll~e~~Vy~~p~------g--R 397 (420)
++.+.++..++++.+.+.|++.| |..+.++ .+++.|.. .+. +.++.|.+++||++.++ + |
T Consensus 257 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iR 332 (356)
T cd06451 257 LENRWARHRRLAKALREGLEALG----LKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFR 332 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEE
Confidence 45556788888999999999877 4433322 34544432 233 55677876679999864 1 9
Q ss_pred EEEccc-CCCCHHHHHHHHHHHhC
Q psy16707 398 ISMAGV-TSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 398 is~agl-~~~ni~~la~AI~~vv~ 420 (420)
|+++.. +++.++++.++++++++
T Consensus 333 is~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 333 IGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred EecCCCCCHHHHHHHHHHHHHHhC
Confidence 998755 68999999999999875
No 135
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.34 E-value=2.7e-05 Score=78.73 Aligned_cols=83 Identities=16% Similarity=0.230 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--CHHHHHHHHHhCCeEEeCCC----cEEEcc-cCCCCH
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEHSVYLTKDG----RISMAG-VTSKNV 408 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~~~~v~~Ll~e~~Vy~~p~g----Ris~ag-l~~~ni 408 (420)
.+.++++++|+.+.+.|++.+....+..+ ...|.|.|+.+ +.+++...+.+.||++.|.+ ||+++. .+++++
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i 368 (379)
T TIGR00707 290 RLLENVKEKGDYFKERLEELGKNYPNKEV-RGKGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEI 368 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCCcc-ccCceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHH
Confidence 35567777777787777766433223222 24677776544 34444334578899999864 888764 789999
Q ss_pred HHHHHHHHHHh
Q psy16707 409 GYLAKAIHAVT 419 (420)
Q Consensus 409 ~~la~AI~~vv 419 (420)
+++.++|.+++
T Consensus 369 ~~~~~~l~~~~ 379 (379)
T TIGR00707 369 DEAVSALEEAI 379 (379)
T ss_pred HHHHHHHHHhC
Confidence 99999998764
No 136
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=98.29 E-value=4e-05 Score=77.23 Aligned_cols=79 Identities=16% Similarity=0.263 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC-------C----cE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-------G----RI 398 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~-------g----Ri 398 (420)
+.+.+++.++++.+.+.|++.| ++.+.+ .|.|.++.++ . +++++| .++||.+.+. | ||
T Consensus 290 ~~~~~~~~~~~~~l~~~L~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRi 363 (385)
T PRK05958 290 PERRERLAALIARLRAGLRALG----FQLMDS-QSAIQPLIVGDNERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRI 363 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCcCCC-CCCEEEEEeCCHHHHHHHHHHH-HHCCceEecccCCCCCCCCceEEE
Confidence 4567889999999999999887 454444 4555554332 2 455677 5679999741 2 99
Q ss_pred EEcc-cCCCCHHHHHHHHHHHh
Q psy16707 399 SMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~ag-l~~~ni~~la~AI~~vv 419 (420)
+++. .+.++++.+.++|.+++
T Consensus 364 s~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 364 TLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred EecCCCCHHHHHHHHHHHHhcC
Confidence 9963 58999999999998763
No 137
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=98.27 E-value=4.3e-05 Score=77.77 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=69.4
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccC-----CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcccc
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKN-----LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRV 243 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~-----~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 243 (420)
.|.|..+..++++.|.++......+. ..+.|. ..+.+.++++.++++-+... .+++.|
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~~~~--~~~~~i-------------- 63 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKGINA--RDLDDI-------------- 63 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHHcCc--CCCCeE--------------
Confidence 37888888999999999998866431 112232 45678899999888733221 123444
Q ss_pred ccccccceeecccchHHHHHHHHHHHh--c-CCCCCEEEEcCCCCCCcHHHH---hhcCcc
Q psy16707 244 GAAFQISIVQGISGTGSLRVGAAFLKN--F-FPGEKVIYVPTPTWGNHIPIC---KHTGLE 298 (420)
Q Consensus 244 ~~~~~~~~vqt~gGtgal~~~~~~l~~--~-~p~gd~VlvpdP~w~ny~~i~---~~aG~~ 298 (420)
+.|.|+|+++.+++..+.. + .+.++.|+++++.||.|.... +..|++
T Consensus 64 --------~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~ 116 (382)
T TIGR03403 64 --------IITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVE 116 (382)
T ss_pred --------EEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCE
Confidence 6699999999987764311 1 342478999998888776543 344554
No 138
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=98.25 E-value=0.0001 Score=73.23 Aligned_cols=80 Identities=19% Similarity=0.222 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC----CCHH-HHHHHHHhCCeEEeCC---------C--c
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG----LNAT-QVEKLIKEHSVYLTKD---------G--R 397 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~----l~~~-~v~~Ll~e~~Vy~~p~---------g--R 397 (420)
.+.+++++.++++.+.+.|++.| |..+..+.+++.+.- .+.+ +.+.|. +.||.+.++ + |
T Consensus 252 ~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~~~~~~~~~~~~~iR 326 (349)
T cd06454 252 GPERRERLQENVRYLRRGLKELG----FPVGGSPSHIIPPLIGDDPAKAVAFSDALL-ERGIYVQAIRYPTVPRGTARLR 326 (349)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC----CcccCCCCCcEEEEeCCChHHHHHHHHHHH-hCCceEEEecCCccCCCCCeEE
Confidence 35567889999999999999887 454445455554331 2234 446665 459999651 2 8
Q ss_pred EEEcc-cCCCCHHHHHHHHHHH
Q psy16707 398 ISMAG-VTSKNVGYLAKAIHAV 418 (420)
Q Consensus 398 is~ag-l~~~ni~~la~AI~~v 418 (420)
|+++. .+.++++++.++|+++
T Consensus 327 i~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 327 ISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCCCHHHHHHHHHHHHHh
Confidence 99876 6899999999999875
No 139
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=98.23 E-value=0.00013 Score=75.18 Aligned_cols=84 Identities=12% Similarity=0.215 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC--CCCceEEec--CCCHHHHHHHHHhCCeEEeCC-------------
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCYT--GLNATQVEKLIKEHSVYLTKD------------- 395 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~--~q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p~------------- 395 (420)
.++.+.+++++.++.+.+.|++... +..+. ...|++.+. +.+.+.+...++++||.+..|
T Consensus 298 g~~~i~~~~~~l~~~l~~~l~~~~~---~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~ 374 (406)
T PRK09295 298 GLNNIAEYEQNLMHYALSQLESVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNV 374 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCC
Confidence 3566678888889999999877521 33222 236777763 455566655668999988532
Q ss_pred ---CcEEEcccCC-CCHHHHHHHHHHHh
Q psy16707 396 ---GRISMAGVTS-KNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ---gRis~agl~~-~ni~~la~AI~~vv 419 (420)
.|||+.--|+ ++|+.++++|.++.
T Consensus 375 ~~~iRiS~~~ynt~~did~l~~~l~~i~ 402 (406)
T PRK09295 375 PAMCRASLAMYNTHEEVDRLVAGLQRIH 402 (406)
T ss_pred CCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 4999987755 78999999998863
No 140
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=98.18 E-value=0.00034 Score=72.94 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--c--CCC-HHHHHHHHHhCCeEE----eC---C----
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--T--GLN-ATQVEKLIKEHSVYL----TK---D---- 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--~--~l~-~~~v~~Ll~e~~Vy~----~p---~---- 395 (420)
+.++++++++.++|+.+.+.|++++. +... +.++|.+ + +.+ .+.+++|+ ++||.. .+ +
T Consensus 348 ~g~~~~~~~~~~~~~~l~~~L~~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~-~~gi~~~~~~~~~~~~~~~~ 421 (447)
T PRK00451 348 EGLRELAEQNHQKAHYLAERLAEIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALL-EKGILGGYDLGRYYPELGNH 421 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHH-hcCCCCCcccccccCCcCCE
Confidence 34677889999999999999998742 3333 4455543 3 334 35557775 555542 11 1
Q ss_pred CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 396 GRISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 gRis~ag-l~~~ni~~la~AI~~vv 419 (420)
-|+++.. .+.+.++++.+++.+++
T Consensus 422 ~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 422 LLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHh
Confidence 2888764 56789999999998875
No 141
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=98.18 E-value=0.00018 Score=72.67 Aligned_cols=91 Identities=12% Similarity=0.002 Sum_probs=59.1
Q ss_pred cccCCCCC-CchHHHHHHHHHHHccCC-CCC---CCC----CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707 170 YRDDQGKP-YVLPSVKQADEIVLNKNL-DKE---YAP----IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS 240 (420)
Q Consensus 170 y~d~dg~~-~~~~~V~~a~~~~~~~~~-~~~---Y~p----~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 240 (420)
|.|..+.+ ++++.|.++......+.. +.. |.+ ..+..++++.+++++ |.. .++.|
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~----~~~~v----------- 65 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF-NAP----SSAHV----------- 65 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh-CcC----CCCeE-----------
Confidence 66665544 566777777766554321 222 332 256778899998865 432 12234
Q ss_pred cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
+.|.|||.++..++.. .+.+ ||+|++++++|+.+..
T Consensus 66 -----------~~~~g~t~al~~~~~~--~~~~-gd~vl~~~~~~~~~~~ 101 (376)
T TIGR01977 66 -----------VFTNNATTALNIALKG--LLKE-GDHVITTPMEHNSVAR 101 (376)
T ss_pred -----------EEeCCHHHHHHHHHHh--ccCC-CCEEEECcchhhHHHH
Confidence 5688999999887653 2456 8999999999987653
No 142
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=98.15 E-value=0.00015 Score=72.10 Aligned_cols=82 Identities=18% Similarity=0.199 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEEecCC------CHHHHHHHHHhCCeEEeCCC-------c
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYTGL------NATQVEKLIKEHSVYLTKDG-------R 397 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~~~~l------~~~~v~~Ll~e~~Vy~~p~g-------R 397 (420)
++...++++++|+.+.+.|++.| |..+.+ ..|++.+..+ +.+++...+++.||.+.+++ |
T Consensus 257 ~~~~~~~~~~~~~~~~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iR 332 (355)
T TIGR03301 257 VPARIARYRRNRELLVDGLRALG----FQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFR 332 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEE
Confidence 55566789999999999999887 553322 3466665433 23455444578899998862 9
Q ss_pred EEE-cccCCCCHHHHHHHHHHHh
Q psy16707 398 ISM-AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~-agl~~~ni~~la~AI~~vv 419 (420)
|++ ...+.+.++.+.++|.+++
T Consensus 333 is~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 333 IGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred EecCCCCCHHHHHHHHHHHHhhC
Confidence 987 4568899999999998863
No 143
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=98.08 E-value=0.00036 Score=70.85 Aligned_cols=94 Identities=17% Similarity=0.161 Sum_probs=60.3
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCC---------CHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIG---------APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G---------~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.|.|..+..++++.|.+|......+ ...|..... ..++|+.++++ +|.+ ++.|
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~-~g~~-----~~~i---------- 62 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTE--YFGNPSSMHSFGGEVGKAVEEAREQVAKL-LGAE-----PDEI---------- 62 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHh--cCCCCCcccHHHHHHHHHHHHHHHHHHHH-hCCC-----CCeE----------
Confidence 3778888888999999998776542 223322111 34556666664 4532 3334
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.|.|||.++..++..+....+.+|+|++++..+|.+...+
T Consensus 63 ------------~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~ 103 (379)
T TIGR03402 63 ------------IFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLC 103 (379)
T ss_pred ------------EEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHH
Confidence 56999999998877644322233689999998888766444
No 144
>PRK02948 cysteine desulfurase; Provisional
Probab=98.06 E-value=0.00022 Score=72.49 Aligned_cols=83 Identities=10% Similarity=0.147 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC------Cce--EEecCCCHHHH-HHHHHhCCeEEeC--------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ------IGM--FCYTGLNATQV-EKLIKEHSVYLTK-------- 394 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q------~Gm--F~~~~l~~~~v-~~Ll~e~~Vy~~p-------- 394 (420)
++++..++++++.|+.+.+.|+++|. +....+ .+. |..-+++.+.+ +.| +++||++..
T Consensus 253 ~~~~~~~~~~~~~~~~l~~~L~~~~~----~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~ 327 (381)
T PRK02948 253 KNMQEESLRFKELRSYFLEQIQTLPL----PIEVEGHSTSCLPHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVGK 327 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----CEEEeCCCccCcCCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCCC
Confidence 34566678999999999999998873 211111 122 22234455544 454 788999963
Q ss_pred -----------------CC--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 395 -----------------DG--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 -----------------~g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
.+ |||+... ++++++.+.++|.+++
T Consensus 328 ~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~ 372 (381)
T PRK02948 328 QEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIG 372 (381)
T ss_pred CCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 12 8887655 6788999999998864
No 145
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=98.04 E-value=0.0003 Score=70.97 Aligned_cols=98 Identities=14% Similarity=0.042 Sum_probs=63.8
Q ss_pred cccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC-----------CCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 170 YRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII-----------GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 170 y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~-----------G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
|.|..+..++++.+.++..+...+ ....|.. +..++++.+++++ |.+. ++.|
T Consensus 2 yl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~~----~~~v--------- 64 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIVDYYRH---YNANVHRGVHELSARATDAYEAAREKVARFI-NAPS----PDEI--------- 64 (373)
T ss_pred cccCccccCCCHHHHHHHHHHHHh---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHh-CCCC----CCeE---------
Confidence 778888888989998888776533 1111222 2456777887755 4321 2333
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhc-CCCCCEEEEcCCCCCCcH----HHHhhcCcc
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-FPGEKVIYVPTPTWGNHI----PICKHTGLE 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-~p~gd~VlvpdP~w~ny~----~i~~~aG~~ 298 (420)
+.|.|+|.++.+++..+..- .| ||+|++++|+|+.+. .+.+..|++
T Consensus 65 -------------~~~~g~t~a~~~~~~~l~~~~~~-g~~vl~~~~~~~~~~~~~~~~~~~~g~~ 115 (373)
T cd06453 65 -------------IFTRNTTEAINLVAYGLGRANKP-GDEIVTSVMEHHSNIVPWQQLAERTGAK 115 (373)
T ss_pred -------------EEeCCHHHHHHHHHHHhhhcCCC-CCEEEECcchhHHHHHHHHHHHhhcCcE
Confidence 56889999999888655321 16 899999999999853 233345654
No 146
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=98.03 E-value=0.00062 Score=70.19 Aligned_cols=83 Identities=19% Similarity=0.329 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCceEEecCC-----CHHHHHHHHHhCCeEEeC------------
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGL-----NATQVEKLIKEHSVYLTK------------ 394 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p------------ 394 (420)
.++.+.++++++++.+.+.|++.| |.... ...+.|.|+.+ +.+.+..++++.||.+..
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~ 355 (416)
T PRK00011 280 EFKEYAQQVVKNAKALAEALAERG----FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFV 355 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCC----CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCC
Confidence 356677889999999999999887 43322 12346666533 345565556889999962
Q ss_pred -C-CcEEE-----cccCCCCHHHHHHHHHHHh
Q psy16707 395 -D-GRISM-----AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 -~-gRis~-----agl~~~ni~~la~AI~~vv 419 (420)
. -|++. .+++.+++++++++|.+++
T Consensus 356 ~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~ 387 (416)
T PRK00011 356 TSGIRIGTPAITTRGFKEAEMKEIAELIADVL 387 (416)
T ss_pred CCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence 1 27743 2567899999999999874
No 147
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=98.00 E-value=0.00037 Score=69.37 Aligned_cols=96 Identities=10% Similarity=-0.057 Sum_probs=64.6
Q ss_pred CCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCccccccccccceee
Q psy16707 177 PYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQ 253 (420)
Q Consensus 177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vq 253 (420)
+.++..+.+......+.+ ...|.+..|..++.+++++++ +|.+. .+.. ++.
T Consensus 9 ~~~~~~~~~~~~~~~n~~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~---~~~~----------------------~~~ 62 (345)
T cd06450 9 MDPPALLLEMLTSAKNAI-DFTWDESPAATEMEAEVVNWLAKLFGLPS---EDAD----------------------GVF 62 (345)
T ss_pred CcHHHHHHHHHHHhcCCC-CcccccCchhHHHHHHHHHHHHHHhCCCC---CCCC----------------------EEE
Confidence 344556666666665543 345999999999999998887 45320 1122 267
Q ss_pred cccchHHHHHHHHHHHhc-C---------C-CCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 254 GISGTGSLRVGAAFLKNF-F---------P-GEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 254 t~gGtgal~~~~~~l~~~-~---------p-~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
|.|||.|+.+++..+... . + .+++|++++|+++.+...++..|.+
T Consensus 63 t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~ 118 (345)
T cd06450 63 TSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVK 118 (345)
T ss_pred eCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcC
Confidence 999999999887655321 1 2 1348999999999988776666553
No 148
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=98.00 E-value=0.00054 Score=70.64 Aligned_cols=80 Identities=20% Similarity=0.278 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE-EecCCC---HHHHHHHHHhCCeEEeCC-------C----cEEE
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF-CYTGLN---ATQVEKLIKEHSVYLTKD-------G----RISM 400 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF-~~~~l~---~~~v~~Ll~e~~Vy~~p~-------g----Ris~ 400 (420)
..+++++++|+.+.+.|++.| |..++.+.+++ .+++.+ .+.+++|++++||++.+. | ||++
T Consensus 300 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~ 375 (410)
T PRK13392 300 TERDAHQDRVAALKAKLNANG----IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITP 375 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEE
Confidence 445778899999999999888 55455555555 345643 245577888899999752 2 8887
Q ss_pred cc-cCCCCHHHHHHHHHHHh
Q psy16707 401 AG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 401 ag-l~~~ni~~la~AI~~vv 419 (420)
.. .+.+++++++++|.++.
T Consensus 376 ~~~~t~edid~l~~aL~~~~ 395 (410)
T PRK13392 376 TPLHDDEDIDALVAALVAIW 395 (410)
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 53 47788999999998763
No 149
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=97.98 E-value=0.00037 Score=69.11 Aligned_cols=81 Identities=17% Similarity=0.042 Sum_probs=56.0
Q ss_pred cCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccce
Q psy16707 172 DDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISI 251 (420)
Q Consensus 172 d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 251 (420)
.++. ..+++.|+++..+... ....|.|..+..++++.+++++ | . +.+
T Consensus 4 ~~~~-~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~~a~~~-g-~------~~~---------------------- 50 (338)
T cd06502 4 SDTV-TGPTPEMLEAMAAANV--GDDVYGEDPTTAKLEARAAELF-G-K------EAA---------------------- 50 (338)
T ss_pred cccC-CCCCHHHHHHHHhccc--CCcccCCCHHHHHHHHHHHHHh-C-C------CeE----------------------
Confidence 3444 3366777777665332 2347878888899999998865 4 1 112
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+.+.|||.++..++..+ +.| ||+|++++|+|+.+
T Consensus 51 ~~~~~gt~a~~~~~~~l--~~~-gd~v~~~~~~~~~~ 84 (338)
T cd06502 51 LFVPSGTAANQLALAAH--TQP-GGSVICHETAHIYT 84 (338)
T ss_pred EEecCchHHHHHHHHHh--cCC-CCeEEEecCcceee
Confidence 56889999988877644 457 89999999998753
No 150
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=97.96 E-value=0.00057 Score=69.70 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=63.9
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccC---CCCCCCCCCC----CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKN---LDKEYAPIIG----APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL 241 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~---~~~~Y~p~~G----~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 241 (420)
.|.|..+-.++++.|.++......+. ....|....| ..++++++++++ |.+ ++.|
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~-~~~-----~~~v------------ 80 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL-NAD-----PPEV------------ 80 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc-CCC-----CCeE------------
Confidence 46666666778888888876655321 1134654444 358888888865 432 1223
Q ss_pred ccccccccceeecccchHHHHHHHHHHH-hcCCCCCEEEEcCCCCCCcH----HHHhhcCcc
Q psy16707 242 RVGAAFQISIVQGISGTGSLRVGAAFLK-NFFPGEKVIYVPTPTWGNHI----PICKHTGLE 298 (420)
Q Consensus 242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~-~~~p~gd~VlvpdP~w~ny~----~i~~~aG~~ 298 (420)
+.+.|+|.++.+....+. .+.| ||+|++++|.|+.+. ...+..|++
T Consensus 81 ----------~~~~~~t~~l~~~~~~~~~~~~~-gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 131 (397)
T TIGR01976 81 ----------VFGANATSLTFLLSRAISRRWGP-GDEVIVTRLDHEANISPWLQAAERAGAK 131 (397)
T ss_pred ----------EEeCCHHHHHHHHHHHHHhcCCC-CCEEEEcCCchHhHHHHHHHHHHhcCCE
Confidence 568889988876554332 2457 899999999987654 334445653
No 151
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=97.96 E-value=0.00049 Score=70.13 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=39.4
Q ss_pred CCCceEEecCC--C-HHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 366 DQIGMFCYTGL--N-ATQVEKLIKEHSVYLTKDG----RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 366 ~q~GmF~~~~l--~-~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
...|+|.|+.+ + .++++.|++ .||++.|++ ||+++ ..+++.++.+.++|.+++
T Consensus 332 ~~~g~~~~i~~~~~~~~~~~~l~~-~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l 392 (396)
T PRK02627 332 RGLGLMIGIELDRPAAEIVKKALE-KGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVL 392 (396)
T ss_pred ccCcEEEEEEecCcHHHHHHHHHH-CCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHH
Confidence 35688887654 3 355677765 499999864 88765 678999999999998875
No 152
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=97.91 E-value=3.2e-05 Score=77.59 Aligned_cols=113 Identities=17% Similarity=0.254 Sum_probs=94.8
Q ss_pred chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
+.++++...+...+ |.++..++..+|.++.+..+ +++.++++++..|..|.+.|++. .|.....+.|+|.+
T Consensus 239 ~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~---~~~~~~~~l~~~~~~l~~~L~~~----~~~~~~~~~~~~~~ 309 (363)
T PF00155_consen 239 LIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEK---WLEELRERLRENRDLLREALEEI----GITVLPPEAGFFLW 309 (363)
T ss_dssp HHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHT----TSEEEHHSBSSEEE
T ss_pred hhhhhhhccccccc--cchhhHHHHHhhhccccccc---ccccchhhHHHHHHHHHHHHHHh----hhheeeccCccEEE
Confidence 34566666665555 88899999999998887655 66778899999999999999877 58888889999999
Q ss_pred cCCCH----HHHHHHHHhcceEEcC--------CCceecccCCcCCHHHHHHHH
Q psy16707 83 TGLNA----TQVEKLIKEHSVYLTK--------DGRISMAGVTSKNVGYLAKAI 124 (420)
Q Consensus 83 ~gL~~----~qv~~L~~~~~IY~~~--------~GRinvagl~~~ni~~va~ai 124 (420)
..+.. +-.++|.++++|++.+ .-||++|..+.++++.++++|
T Consensus 310 ~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 310 VRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred EEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 99886 4667898888999987 689999999999999999886
No 153
>PRK08637 hypothetical protein; Provisional
Probab=97.81 E-value=0.00024 Score=72.79 Aligned_cols=113 Identities=19% Similarity=0.210 Sum_probs=87.2
Q ss_pred hhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH---
Q psy16707 11 IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA--- 87 (420)
Q Consensus 11 ~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~--- 87 (420)
.+..++++|...-.++..+|+++ .|.++++.++.+++..+..+.+.|+..+.++.|.++..+.|||.+.-+..
T Consensus 263 ~~~~~~~~s~~~q~a~~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 338 (388)
T PRK08637 263 IRSNISNGPHPSQSAVLRALNSP----EFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDA 338 (388)
T ss_pred hhcccCCCCcHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChHHH
Confidence 34566788888999999999986 46667777777777778888888876655567888888999999987752
Q ss_pred -HHHHHHHHhcceEEc----CCCceecccCCcCCHHHHHHHHHhh
Q psy16707 88 -TQVEKLIKEHSVYLT----KDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 -~qv~~L~~~~~IY~~----~~GRinvagl~~~ni~~va~ai~~v 127 (420)
+-++.|.++++|.+. ...|||++.++..+++..++.|.++
T Consensus 339 ~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~ 383 (388)
T PRK08637 339 EELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKA 383 (388)
T ss_pred HHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 234566678888876 3469999999999988887777665
No 154
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=97.79 E-value=0.0057 Score=61.50 Aligned_cols=83 Identities=20% Similarity=0.346 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-ccCCCCceEEecCCCHHHH-HHHHHhCCeEEeCC-----CcEEEcc-cC
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLNATQV-EKLIKEHSVYLTKD-----GRISMAG-VT 404 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~-~i~~q~GmF~~~~l~~~~v-~~Ll~e~~Vy~~p~-----gRis~ag-l~ 404 (420)
.++.++++..+.++.|.+.|++.| +. .+.+..+++.+.--+.+.+ ++| .+.||++.+. -|||+.. .+
T Consensus 280 g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~v~~~~~~~~~v~~~L-~~~gi~v~~~~~~~~iRis~~~~~t 354 (371)
T PRK13520 280 GYRKVVERCMENTRWLAEELKERG----FEPVIEPVLNIVAFDDPNPDEVREKL-RERGWRVSVTRCPEALRIVCMPHVT 354 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCceEEEEecCCHHHHHHHH-HHCCceeccCCCCCEEEEEEECCCC
Confidence 455677888899999999999877 44 4455566665432244555 555 5679998663 2888754 36
Q ss_pred CCCHHHHHHHHHHHhC
Q psy16707 405 SKNVGYLAKAIHAVTK 420 (420)
Q Consensus 405 ~~ni~~la~AI~~vv~ 420 (420)
.+.++++.+++.++++
T Consensus 355 ~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 355 REHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7899999999998764
No 155
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=97.76 E-value=0.0011 Score=67.90 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--C-HHHHHHHHHhCCeEEeCCC----cEEEc
Q psy16707 329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--N-ATQVEKLIKEHSVYLTKDG----RISMA 401 (420)
Q Consensus 329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~-~~~v~~Ll~e~~Vy~~p~g----Ris~a 401 (420)
.+.+.++.+.++++++++.+.+. . ++-+.. ....|+|.++.+ + .++++.|+++ ||++.|++ ||+.+
T Consensus 295 ~~~~~~~~~~~~l~~~l~~l~~~---~--~~~~~~-v~g~G~~~~i~~~~~~~~~~~~l~~~-GV~~~p~~~~~lR~~p~ 367 (389)
T PRK01278 295 GFLDNVQRMGLYLKQKLEGLVDR---F--PDVIEE-VRGKGLLLGLKCVVPNRDLVQALRDE-GLLTVGAGDNVVRLLPP 367 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh---C--CCceee-EecccEEEEEEEecCHHHHHHHHHHC-CeEEeecCCCEEEEeCC
Confidence 34456666666666666554322 1 111222 334678877533 2 3556777655 99999875 88864
Q ss_pred -ccCCCCHHHHHHHHHHHh
Q psy16707 402 -GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 402 -gl~~~ni~~la~AI~~vv 419 (420)
..++++|++..+++.+++
T Consensus 368 ~~~~~~~i~~~l~~l~~~l 386 (389)
T PRK01278 368 LIITEEEIDEALERLERAA 386 (389)
T ss_pred cccCHHHHHHHHHHHHHHH
Confidence 378889999999998875
No 156
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=97.76 E-value=0.00095 Score=69.15 Aligned_cols=83 Identities=16% Similarity=0.247 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC-------CCCceEEec--CCCHHHH-HHHHHhCCeEEeCC------
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT-------DQIGMFCYT--GLNATQV-EKLIKEHSVYLTKD------ 395 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~-------~q~GmF~~~--~l~~~~v-~~Ll~e~~Vy~~p~------ 395 (420)
-++.++++..+.++.+.+.|+++ | +..+. .+.|++.+. +.+.+.+ +.|.+++||.+..+
T Consensus 306 g~~~i~~~~~~l~~~l~~~L~~~~g----~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~ 381 (424)
T PLN02855 306 GMDRIHEYEVELGTYLYEKLSSVPG----VRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQP 381 (424)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCC----EEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHH
Confidence 44566678888888999988775 3 22221 234566553 5565555 56655669988742
Q ss_pred ----------CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 396 ----------GRISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ----------gRis~agl-~~~ni~~la~AI~~vv 419 (420)
-|||+.-. +.++|++++++|.+++
T Consensus 382 ~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~ 416 (424)
T PLN02855 382 LHRYLGVNASARASLYFYNTKEEVDAFIHALKDTI 416 (424)
T ss_pred HHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHH
Confidence 29998544 6688999999999876
No 157
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=97.73 E-value=0.0024 Score=63.75 Aligned_cols=238 Identities=14% Similarity=0.122 Sum_probs=144.3
Q ss_pred HHHHHHHHHc-cCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc--------CCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707 147 SNLLTEAFKK-DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--------NLDKEYAPIIGAPDFGKLAAQLAY 217 (420)
Q Consensus 147 i~~l~~~~~~-d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--------~~~~~Y~p~~G~~~fr~a~~~~~~ 217 (420)
|..+.+.... -..+..|+||-| +|...|.+.+..+.+..+ +....|..+.|...|.+++++.+-
T Consensus 16 i~~lMdDl~d~Lrt~g~imLggG-------NPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~ 88 (417)
T COG3977 16 ITQLMDDLNDGLRTPGAIMLGGG-------NPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLR 88 (417)
T ss_pred HHHHHHHHHhhccCCCceeeCCC-------CcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 4444443322 234678999887 367777777766554332 123589999999999999999995
Q ss_pred CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC--CEEEEc-CCCCCCcHHHHhh
Q psy16707 218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE--KVIYVP-TPTWGNHIPICKH 294 (420)
Q Consensus 218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g--d~Vlvp-dP~w~ny~~i~~~ 294 (420)
.+++-.+.+.+|. .|.|...+..-.+-++.-..+.| +.|++| .|-|--|..+.-.
T Consensus 89 ~~ygwnit~~NIa----------------------lTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~ 146 (417)
T COG3977 89 REYGWNITAQNIA----------------------LTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLE 146 (417)
T ss_pred HHhCCCCccceee----------------------ecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccC
Confidence 5554446777774 47777777666665554333323 345554 4666655532110
Q ss_pred c---------------C-cc------------------------------------------------------------
Q psy16707 295 T---------------G-LE------------------------------------------------------------ 298 (420)
Q Consensus 295 a---------------G-~~------------------------------------------------------------ 298 (420)
- | ++
T Consensus 147 ~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP 226 (417)
T COG3977 147 EDLFVSAKPNIELLPAGQFKYHVDFEHLHIGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFP 226 (417)
T ss_pred ccceeeccCCcccccccceeeccCHHHcccccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCC
Confidence 0 0 00
Q ss_pred -------------------------------------hhhhhh------ccC-CCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 299 -------------------------------------KILIRA------FYS-SPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 299 -------------------------------------~~~~r~------~~s-~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
++++.+ ..| .|..+|+.|++..++.-+|.+--++-+
T Consensus 227 ~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVI 306 (417)
T COG3977 227 GIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVI 306 (417)
T ss_pred ceecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhh
Confidence 223222 122 467889999999887666654422222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-----CCCHHHHHHHHHhCCeEEeCC--------------
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVEKLIKEHSVYLTKD-------------- 395 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p~-------------- 395 (420)
+-=|+++-+.....|++.=....|---.+.+..|.|+ +.+.++.-+.+++.||.++||
T Consensus 307 ---rPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~ 383 (417)
T COG3977 307 ---RPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHT 383 (417)
T ss_pred ---hHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCc
Confidence 2345666666666676654455676556666788874 777777755558999999997
Q ss_pred ---CcEEEcccCCCCH----HHHHHHHHH
Q psy16707 396 ---GRISMAGVTSKNV----GYLAKAIHA 417 (420)
Q Consensus 396 ---gRis~agl~~~ni----~~la~AI~~ 417 (420)
-|+|++. +++.| ..+|++|.+
T Consensus 384 hqC~Rmn~~~-~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 384 HQCMRMNYVP-EPEKIEKGVAILAEEVER 411 (417)
T ss_pred cceEEEecCC-CHHHHHHHHHHHHHHHHH
Confidence 1999984 33333 344454444
No 158
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=97.70 E-value=0.0012 Score=67.36 Aligned_cols=97 Identities=14% Similarity=0.093 Sum_probs=67.6
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~ 236 (420)
..+||.+ |++ ..=|..++++.|.+|.....++ |. +.+++++++.+++ +|.+ .+
T Consensus 8 ~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g~~-------~~------- 63 (363)
T TIGR01437 8 KKVINAS-GKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLGVE-------DA------- 63 (363)
T ss_pred ceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhCCC-------eE-------
Confidence 3567754 555 4556677899999988876532 43 5667777777665 4432 22
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC---------------EEEEcCCCCCCc----HHHHhhcCc
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK---------------VIYVPTPTWGNH----IPICKHTGL 297 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd---------------~VlvpdP~w~ny----~~i~~~aG~ 297 (420)
+.|.|||.|+.+++..+ +.| || +|++|.|.|++| ..+...+|+
T Consensus 64 ---------------~~~~g~t~al~~al~al--~~~-Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~ 125 (363)
T TIGR01437 64 ---------------VIVSSASAGIAQSVAAV--ITR-GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGG 125 (363)
T ss_pred ---------------EEEcCHHHHHHHHHHHH--hcC-CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCC
Confidence 67999999999988755 446 77 999999999988 356666665
Q ss_pred c
Q psy16707 298 E 298 (420)
Q Consensus 298 ~ 298 (420)
+
T Consensus 126 ~ 126 (363)
T TIGR01437 126 K 126 (363)
T ss_pred e
Confidence 3
No 159
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=97.67 E-value=0.0015 Score=65.91 Aligned_cols=81 Identities=19% Similarity=0.252 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEE---ecC---CCHHHH-HHHHHhCCeEEeCCC-------
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFC---YTG---LNATQV-EKLIKEHSVYLTKDG------- 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~---~~~---l~~~~v-~~Ll~e~~Vy~~p~g------- 396 (420)
++...++++++|+.+.+.|+++| |..+.+ +.+... +.. .+...+ +.| +++||.+.|+.
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L-~~~gi~v~~g~~~~~~~i 336 (363)
T TIGR02326 262 VAARHQRYQQNQKTLVAGMRALG----FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRL-KEQGFVIYPGKVSQVDCF 336 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCceEEEEECCCCCCCCHHHHHHHH-HHCCEEEECCcCCCCCEE
Confidence 45566899999999999999887 443332 344433 222 233444 555 67899998872
Q ss_pred cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707 397 RISM-AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 Ris~-agl~~~ni~~la~AI~~vv 419 (420)
||++ ...+.++++.+.++|.+++
T Consensus 337 Ri~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 337 RIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EEecCCCCCHHHHHHHHHHHHHHh
Confidence 9985 5578999999999999876
No 160
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=97.64 E-value=0.0026 Score=65.99 Aligned_cols=98 Identities=14% Similarity=0.004 Sum_probs=61.4
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
.+...+|+.-|.+-..=| ...|.|.+|.....++ ..+-+.+..|.++|++++++++-+. ++|
T Consensus 46 dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~-~~~~~~~~~~~~~lae~l~~~~~~~-------~~v-------- 107 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILG--HAHPRVVEAVKEALER-GTSYGAPTEAEILLAKEIISRVPSV-------EMV-------- 107 (423)
T ss_pred CCCEEEEccccccccccC--CCCHHHHHHHHHHHHh-CCcCCCCCHHHHHHHHHHHHhCCcc-------cEE--------
Confidence 356678888776433335 4556666666555543 3443447889999999999976331 244
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+.+.|||.|+..+..+...+.. .+.|+..+|+|..+
T Consensus 108 --------------~~~~sGseA~e~Alk~ar~~~g-r~~ii~~~~~yhG~ 143 (423)
T TIGR00713 108 --------------RFVNSGTEATMSAVRLARGYTG-RDKIIKFEGCYHGH 143 (423)
T ss_pred --------------EEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCCCCC
Confidence 4589999888887765433323 46666655555554
No 161
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=97.63 E-value=0.0037 Score=63.90 Aligned_cols=83 Identities=16% Similarity=0.220 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC------------HH-HHHHHHHhCCeEEeCCC----cE
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------------AT-QVEKLIKEHSVYLTKDG----RI 398 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~------------~~-~v~~Ll~e~~Vy~~p~g----Ri 398 (420)
.+.++++++++.+.+.|++++...++.......|+|.++.+. .. ..+.| .++||++.|++ ||
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~~~~lR~ 391 (413)
T cd00610 313 GLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSGGNVIRL 391 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecCCCEEEE
Confidence 455777777888888777664311121112345666654321 22 33555 57899999862 88
Q ss_pred EEccc-CCCCHHHHHHHHHHHh
Q psy16707 399 SMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~agl-~~~ni~~la~AI~~vv 419 (420)
+++.. ++++|+.+.+++.+++
T Consensus 392 ~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 392 LPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred ECCCcCCHHHHHHHHHHHHHhC
Confidence 87754 6789999999998764
No 162
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=97.56 E-value=0.0051 Score=63.06 Aligned_cols=80 Identities=14% Similarity=0.167 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---H-HHHHHHHHhCCeEEeCCC----cEEEcc-cCCCC
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---A-TQVEKLIKEHSVYLTKDG----RISMAG-VTSKN 407 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~-~~v~~Ll~e~~Vy~~p~g----Ris~ag-l~~~n 407 (420)
..+++.++++.|.+.|++++.+ +-......|.|.++-++ . +..+.| .+.||++.+.+ ||+.+. .+++.
T Consensus 304 ~~~~~~~~~~~l~~~L~~~~~~--~~~~v~g~g~~~~i~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~iR~~p~~~~t~~~ 380 (398)
T PRK03244 304 LLENAERLGEQLRAGIEALGHP--LVDHVRGRGLLLGIVLTAPVAKAVEAAA-REAGFLVNAVAPDVIRLAPPLIITDAQ 380 (398)
T ss_pred HHHHHHHHHHHHHHHHHhcCCC--ceeeEeeccEEEEEEEeccHHHHHHHHH-HHCCeEEeecCCCEEEEECCCcCCHHH
Confidence 3467777788888899887632 11122347888886553 2 334555 57899998754 888776 78899
Q ss_pred HHHHHHHHHHHh
Q psy16707 408 VGYLAKAIHAVT 419 (420)
Q Consensus 408 i~~la~AI~~vv 419 (420)
|+++.+++.+++
T Consensus 381 i~~~~~~l~~~l 392 (398)
T PRK03244 381 VDAFVAALPAIL 392 (398)
T ss_pred HHHHHHHHHHHH
Confidence 999999998876
No 163
>PLN02409 serine--glyoxylate aminotransaminase
Probab=97.55 E-value=0.0084 Score=61.99 Aligned_cols=83 Identities=14% Similarity=0.159 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC----CceEEec----CCCHH-HHHHHHHhCCeEEeCC-----C--
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCYT----GLNAT-QVEKLIKEHSVYLTKD-----G-- 396 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q----~GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~-----g-- 396 (420)
-++.+.+|+++.++.+.+.|++.| ++.+.+. .+...++ +.+.+ .++.|+++++|.+..| |
T Consensus 270 G~e~i~~~~~~l~~~l~~~L~~~g----~~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~ 345 (401)
T PLN02409 270 GLENVIARHARLGEATRLAVEAWG----LKLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKV 345 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcC----CeeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCE
Confidence 367778999999999999999887 3433321 2221222 45544 4478889999999865 2
Q ss_pred -cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 397 -RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 -Ris~agl-~~~ni~~la~AI~~vv 419 (420)
||+..|- +..++..+..|+.+++
T Consensus 346 ~Rig~~g~~~~~~~~~~~~~~~~~l 370 (401)
T PLN02409 346 FRIGHLGNVNELQLLGALAGVEMVL 370 (401)
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 9998874 5566777777777764
No 164
>PRK07179 hypothetical protein; Provisional
Probab=97.53 E-value=0.0048 Score=63.55 Aligned_cols=80 Identities=15% Similarity=0.251 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec--CC--CHHHHHHHHHhCCeEE----eCC-------CcE
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GL--NATQVEKLIKEHSVYL----TKD-------GRI 398 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~--~l--~~~~v~~Ll~e~~Vy~----~p~-------gRi 398 (420)
.+..+++++++++.|.+.|+++| |+.. .. |.|.++ +. +.+.+...+.++||++ .|. -||
T Consensus 301 ~~~~~~~l~~~~~~l~~~L~~~g----~~v~-~~-~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRi 374 (407)
T PRK07179 301 ADDRRARLHANARFLREGLSELG----YNIR-SE-SQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRL 374 (407)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcC----CCCC-CC-CCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEE
Confidence 34567889999999999999887 4322 33 444443 32 2345544557889973 332 299
Q ss_pred EEcc-cCCCCHHHHHHHHHHHh
Q psy16707 399 SMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~ag-l~~~ni~~la~AI~~vv 419 (420)
+++. .+.+.|+++.+++.+++
T Consensus 375 s~~~~~t~edi~~~~~~l~~~~ 396 (407)
T PRK07179 375 SLNADLTASDLDRVLEVCREAR 396 (407)
T ss_pred EECCCCCHHHHHHHHHHHHHHH
Confidence 9975 47789999999998864
No 165
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=97.53 E-value=0.0088 Score=60.40 Aligned_cols=81 Identities=19% Similarity=0.242 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---C-ceEE-ecC----CCHHHH-HHHHHhCCeEEeCC-------C
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---I-GMFC-YTG----LNATQV-EKLIKEHSVYLTKD-------G 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~-GmF~-~~~----l~~~~v-~~Ll~e~~Vy~~p~-------g 396 (420)
++...+++.++|+.+.+.|+++| |..+.++ . +... +.. .+.+.+ ++| .+.||.+.++ -
T Consensus 263 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gi~v~~g~~~~~~~i 337 (368)
T PRK13479 263 VPARGARYANNQRTLVAGMRALG----FEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERL-KEQGFVIYPGKLTQVDTF 337 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CcccCCchhcCceEEEEECCCCCCcCHHHHHHHH-HHCCEEEecCCCCCCCEE
Confidence 45556889999999999999987 4433221 1 2222 322 233444 555 6779999774 2
Q ss_pred cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707 397 RISM-AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 Ris~-agl~~~ni~~la~AI~~vv 419 (420)
||+. ...+.++++++.+++.+++
T Consensus 338 Ris~~~~~t~edi~~~l~~L~~~l 361 (368)
T PRK13479 338 RIGCIGDVDAADIRRLVAAIAEAL 361 (368)
T ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Confidence 9985 6678899999999998875
No 166
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=97.52 E-value=0.0068 Score=61.81 Aligned_cols=84 Identities=13% Similarity=0.215 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc--cCCCCceEEecCCC------------HHHHHHHHHhCCeE-EeCC
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH--ITDQIGMFCYTGLN------------ATQVEKLIKEHSVY-LTKD 395 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~--i~~q~GmF~~~~l~------------~~~v~~Ll~e~~Vy-~~p~ 395 (420)
.+.++.+.+.++.+| .|.+.|+++| ++. ..+....|.++..+ ..++...+.+.||+ +.++
T Consensus 264 ~~~l~~~~~~~~~~~-~l~~~L~~~g----~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~ 338 (370)
T TIGR02539 264 VERVKRWDEEVKKTR-WFVAELEDIG----FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSG 338 (370)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHhCC----cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCC
Confidence 344554545555544 7999999988 442 22345556654321 12454444677998 6664
Q ss_pred C----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 G----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 g----Ris~agl~~~ni~~la~AI~~vv 419 (420)
. ||++++.+.++++++.+++.+++
T Consensus 339 ~~~~iRis~~~~t~e~i~~l~~~L~~~~ 366 (370)
T TIGR02539 339 QTKYFKLSVYGLTKEQVEYVVDSFEEIV 366 (370)
T ss_pred cceEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 2 99987789999999999998875
No 167
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=97.51 E-value=0.00075 Score=66.27 Aligned_cols=113 Identities=19% Similarity=0.228 Sum_probs=90.6
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
.+.++...+..+++||.++...+...|.... ++++.++++++..++.|.+.|++.+.... .....|+|.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---~~~~~g~~~~~ 294 (350)
T cd00609 224 LERLKKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALKELGPLVV---VKPSGGFFLWL 294 (350)
T ss_pred HHHHHHHHHhcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHhcCCccc---cCCCccEEEEE
Confidence 4566777787889999999999999998755 66788889999999999999987654321 35577898888
Q ss_pred CCC----HHHHHHHHHhcceEEcCC----------CceecccCCcCCHHHHHHHHHh
Q psy16707 84 GLN----ATQVEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 84 gL~----~~qv~~L~~~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~ 126 (420)
.++ .+.+.++-++++|++... -||+++.. .++|++++++|.+
T Consensus 295 ~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~~ 350 (350)
T cd00609 295 DLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLAE 350 (350)
T ss_pred ecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhhC
Confidence 665 456777778999999865 58999999 9999999999863
No 168
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=97.48 E-value=0.019 Score=57.80 Aligned_cols=80 Identities=14% Similarity=0.244 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-ccCCCCceEEecCCC-HHHHHHHHHhCCeEEeCC-----CcEEEccc-C
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD-----GRISMAGV-T 404 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~-~i~~q~GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~-----gRis~agl-~ 404 (420)
.++.+.+++.+.++.|.+.|+++| +. .+.+...+..+...+ .+..++| .+.||++.+. -||++.+. +
T Consensus 285 g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~v~~~~~~~~~v~~~L-~~~gi~v~~~~~~~~iRis~~~~~t 359 (373)
T TIGR03812 285 GYRKIVAECMENTRYLVEELKKIG----FEPVIEPVLNIVAFEVDDPEEVRKKL-RDRGWYVSVTRCPKALRIVVMPHVT 359 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC----CeEEcCCCceEEEEEeCCHHHHHHHH-HHCCceeccCCCCCEEEEEEECCCC
Confidence 445677899999999999999987 33 223333333332112 3444666 5679999764 29988654 7
Q ss_pred CCCHHHHHHHHHH
Q psy16707 405 SKNVGYLAKAIHA 417 (420)
Q Consensus 405 ~~ni~~la~AI~~ 417 (420)
.+.++++.++|.+
T Consensus 360 ~edid~l~~~L~~ 372 (373)
T TIGR03812 360 REHIEEFLEDLKE 372 (373)
T ss_pred HHHHHHHHHHHhh
Confidence 7889999999875
No 169
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=97.47 E-value=0.011 Score=59.93 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCCC----cEEE-cccCCCCHH
Q psy16707 339 DRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG----RISM-AGVTSKNVG 409 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~g----Ris~-agl~~~ni~ 409 (420)
++++++++.+.+.|++. +.+ +.......|+|.|+.+. .+.+...+.+.||++.|+| ||+. ...++++|+
T Consensus 290 ~~~~~~~~~l~~~L~~~~~~~~--~~~~v~~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~ 367 (377)
T PRK02936 290 EEVQEKGEYFLQKLQEELEHLE--CVKNIRGKGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELD 367 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhCC--cEEeEeecceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHH
Confidence 55566666666666653 222 11112356888887653 3444445578999999875 8886 458999999
Q ss_pred HHHHHHHHHh
Q psy16707 410 YLAKAIHAVT 419 (420)
Q Consensus 410 ~la~AI~~vv 419 (420)
++.++|.+++
T Consensus 368 ~~i~~l~~~~ 377 (377)
T PRK02936 368 QAVYLLKKVL 377 (377)
T ss_pred HHHHHHHHhC
Confidence 9999998764
No 170
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=97.45 E-value=0.0062 Score=62.80 Aligned_cols=74 Identities=24% Similarity=0.386 Sum_probs=45.0
Q ss_pred CCCCC-CCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc--
Q psy16707 195 LDKEY-APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-- 271 (420)
Q Consensus 195 ~~~~Y-~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-- 271 (420)
+...| .-..|+|+.|+..++++ |.+ +++| ..||..+|.+....+...
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~ll-gv~-----~~~v------------------------iv~gNSSL~lM~d~i~~a~~ 109 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELL-GVP-----PENV------------------------IVGGNSSLNLMHDTISRAML 109 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHH-TS------GGGE------------------------EE-SS-HHHHHHHHHHHHHH
T ss_pred cccCCCCccCChHHHHHHHHHHh-CCC-----HHHE------------------------EEeccchHHHHHHHHHHHHh
Confidence 34689 88999999999999976 543 3444 347777777655443321
Q ss_pred -------CCC----CCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 272 -------FPG----EKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 272 -------~p~----gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.|. .-+.+.|-|+|.-|+.|++..|++
T Consensus 110 ~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Gie 147 (425)
T PF12897_consen 110 HGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIE 147 (425)
T ss_dssp H--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-E
T ss_pred cCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcE
Confidence 121 234788999999999999999997
No 171
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=97.44 E-value=0.013 Score=60.36 Aligned_cols=95 Identities=17% Similarity=0.096 Sum_probs=61.2
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccC-CCCC-CC------CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKN-LDKE-YA------PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS 240 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~-~~~~-Y~------p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 240 (420)
.|.|..+-.++++.|.++........ .+.. .. ....+.++|+.+++++ |.+ ++.|
T Consensus 5 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~-----~~~v----------- 67 (402)
T TIGR02006 5 IYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI-GAD-----SREI----------- 67 (402)
T ss_pred EEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeE-----------
Confidence 57788787788899999876654321 1111 01 1123556677787754 532 3334
Q ss_pred cccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHH
Q psy16707 241 LRVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.|.|||.++.+++..+.. ..+ ||.|+++++.++++...+
T Consensus 68 -----------~~~~g~t~a~~~~l~~l~~~~~~~-g~~Vi~~~~~h~s~~~~~ 109 (402)
T TIGR02006 68 -----------VFTSGATESNNLAIKGIAHFYKSK-GNHIITSKTEHKAVLDTC 109 (402)
T ss_pred -----------EEeCCHHHHHHHHHHHHHHhhcCC-CCEEEECCCccHHHHHHH
Confidence 5689999999887654432 235 899999999998766444
No 172
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=97.30 E-value=0.022 Score=60.67 Aligned_cols=107 Identities=11% Similarity=0.044 Sum_probs=62.0
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCC---CCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEY---APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y---~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
++--+|.|.+ ...++|.|.++..........|.| .+..|..+++.++++++-...+. + .+.
T Consensus 69 ~~~~~g~G~~-----~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~--~~~------- 132 (481)
T PRK04366 69 DTGFYPLGSC-----TMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--D--AVT------- 132 (481)
T ss_pred CcceecCccc-----CCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--C--ceE-------
Confidence 3345777752 245666666655443111345677 44679999999888887332221 1 122
Q ss_pred CCccccccccccceeecccc-hHHHHHHHHHH-HhcCCCCC----EEEEcCCCCCCcHHHHhhcCcc
Q psy16707 238 TGSLRVGAAFQISIVQGISG-TGSLRVGAAFL-KNFFPGEK----VIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gG-tgal~~~~~~l-~~~~p~gd----~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+...+| ++.+...+.+- ....+ || +|++++|+||.|...++..|++
T Consensus 133 --------------l~~~~GA~a~~~~l~~~r~~~~~~-Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~ 184 (481)
T PRK04366 133 --------------LQPAAGAHGELTGLLMIRAYHEAR-GDTKRTEVIVPDSAHGTNPASAAMAGFK 184 (481)
T ss_pred --------------EEeCcHHHHHHHHHHHHHHHhhcc-CcCCCCEEEEcCCccHhHHHHHHHcCCE
Confidence 333333 34433222110 11335 65 9999999999999998888875
No 173
>PRK06108 aspartate aminotransferase; Provisional
Probab=97.29 E-value=0.002 Score=65.19 Aligned_cols=111 Identities=16% Similarity=0.147 Sum_probs=77.6
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++.+.....+++|..+..++...|.+. .+.++.++++++..|+.|.+.|++. + .|..+..+.|||.+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~--~-~~~~~~p~~g~~~~~~l 323 (382)
T PRK06108 253 VLEKLIEYNTSCVAQFVQRAAVAALDEG------EDFVAELVARLRRSRDHLVDALRAL--P-GVEVAKPDGAMYAFFRI 323 (382)
T ss_pred HHHHHHHhcccCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHHhC--C-CCcccCCCeeEEEEEeC
Confidence 3444444456678888888888888763 2345678889999999999999875 2 27777778899988766
Q ss_pred C-----HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHh
Q psy16707 86 N-----ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 86 ~-----~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~ 126 (420)
. .+.++.|.++++|++.+. + ||+++. ++..++...+.|.+
T Consensus 324 ~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 378 (382)
T PRK06108 324 PGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRR 378 (382)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHH
Confidence 3 356677888899999542 2 677776 55555555555544
No 174
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=97.26 E-value=0.012 Score=60.80 Aligned_cols=61 Identities=11% Similarity=0.030 Sum_probs=41.5
Q ss_pred CCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEE
Q psy16707 199 YAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVI 278 (420)
Q Consensus 199 Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~V 278 (420)
|....+..+|.+++++++-+++. +..++|+.+...+...+ +.| ||.|
T Consensus 39 yg~~~~~~~LE~~lA~~~g~e~a------------------------------l~~~sG~~a~~~~i~~l--~~~-GD~V 85 (392)
T PLN03227 39 YGTIDAHLELEQCMAEFLGTESA------------------------------ILYSDGASTTSSTVAAF--AKR-GDLL 85 (392)
T ss_pred cCChHHHHHHHHHHHHHhCCCcE------------------------------EEecCcHHHHHHHHHHh--CCC-CCEE
Confidence 77777899999999997744321 44566654444443323 457 8999
Q ss_pred EEcCCCCCCcHHHH
Q psy16707 279 YVPTPTWGNHIPIC 292 (420)
Q Consensus 279 lvpdP~w~ny~~i~ 292 (420)
+++++.|+++...+
T Consensus 86 l~~~~~h~s~~~~~ 99 (392)
T PLN03227 86 VVDRGVNEALLVGV 99 (392)
T ss_pred EEeccccHHHHHHH
Confidence 99999998877553
No 175
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=97.26 E-value=0.015 Score=59.75 Aligned_cols=76 Identities=24% Similarity=0.375 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCcccC---CCCceEEe-cC-C---------C-HHHHHHHHHhCCeEEeCCC-----c
Q psy16707 339 DRIISMRQSLKDNLQKE-GSNKPWNHIT---DQIGMFCY-TG-L---------N-ATQVEKLIKEHSVYLTKDG-----R 397 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~-g~~~~w~~i~---~q~GmF~~-~~-l---------~-~~~v~~Ll~e~~Vy~~p~g-----R 397 (420)
++..++++.+.+.|+++ | ++.+. ....+..+ ++ + + .++.+.| +++||+..+.| |
T Consensus 283 ~~~~~~~~~l~~~L~~l~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~~~~i~r 357 (387)
T PRK09331 283 DEEVKKARWFVDELEKIEG----FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPGATKEFK 357 (387)
T ss_pred HHHHHHHHHHHHHHhcCCC----EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEccCCceEEE
Confidence 34455666888899888 6 33231 12222221 11 1 1 2344666 67899965433 7
Q ss_pred EEEcccCCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl~~~ni~~la~AI~~vv 419 (420)
|...|.+.++++++.+++.++.
T Consensus 358 i~~~g~t~~di~~l~~aL~~i~ 379 (387)
T PRK09331 358 LSTYGLTWEQVEYVADAFKEIA 379 (387)
T ss_pred EEeccCCHHHHHHHHHHHHHHH
Confidence 8877889999999999999874
No 176
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=97.20 E-value=0.03 Score=57.53 Aligned_cols=81 Identities=21% Similarity=0.225 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe-cCCC---HHHHHHHHHhCCeEEeCC-------C----cEE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGLN---ATQVEKLIKEHSVYLTKD-------G----RIS 399 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~-~~l~---~~~v~~Ll~e~~Vy~~p~-------g----Ris 399 (420)
..+++++.++++.+.+.|+++| |+.+....+++.. ++.. .+..++|++++||++.+. | ||+
T Consensus 298 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis 373 (402)
T TIGR01821 298 QDLRRAHQENVKRLKNLLEALG----IPVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRIT 373 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEE
Confidence 3445677788899999999887 5555555444332 3321 245577777889998651 2 788
Q ss_pred Ecc-cCCCCHHHHHHHHHHHh
Q psy16707 400 MAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 400 ~ag-l~~~ni~~la~AI~~vv 419 (420)
+.. .+.++|+++.+++++++
T Consensus 374 ~~~~~t~edi~~~~~~l~~~~ 394 (402)
T TIGR01821 374 PTPAHTDKMIDDLVEALLLVW 394 (402)
T ss_pred eCCCCCHHHHHHHHHHHHHHH
Confidence 754 47788999999998875
No 177
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=97.16 E-value=0.029 Score=58.15 Aligned_cols=89 Identities=16% Similarity=0.222 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC-----------
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKEGSN----KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD----------- 395 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~----~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~----------- 395 (420)
.+++.....++.+.|+.|.+.|.+.... +.=++-.+..=-|++-|+..|.+...++.+||++..|
T Consensus 255 ~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pS 334 (386)
T COG1104 255 VEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPS 334 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCcc
Confidence 3566666788999999999999875211 0112234445567778888888877779999999764
Q ss_pred ----------------CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 396 ----------------GRISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ----------------gRis~agl-~~~ni~~la~AI~~vv 419 (420)
-|||+... +++.++++++++.+++
T Consensus 335 hVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i 375 (386)
T COG1104 335 HVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEII 375 (386)
T ss_pred HHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 19999977 4567999999999876
No 178
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=97.13 E-value=0.048 Score=55.54 Aligned_cols=101 Identities=10% Similarity=0.092 Sum_probs=67.1
Q ss_pred hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--CHHHHHHHHHhC
Q psy16707 311 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEH 388 (420)
Q Consensus 311 ~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~~~~v~~Ll~e~ 388 (420)
..++.++..+|.. + +..+.++.++++.+..|+.+.+.+.+.+. +..+. ..|+|.|+.+ +.+++...+.++
T Consensus 268 ~~~~~aa~a~l~~--~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~ 339 (375)
T PRK04260 268 KLSMAAASATLDI--M--LTAGFLEQALENGNYLQEQLQKALQDKET---VTTVR-GLGYMIGIETTADLSQLVEAARDK 339 (375)
T ss_pred HHHHHHHHHHHHH--H--HhhHHHHHHHHHHHHHHHHHHHHHhhCCC---eeEEe-ccceEEEEEecCcHHHHHHHHHhC
Confidence 3355555555532 1 12245566778888888888887766531 22333 3799998754 344443344679
Q ss_pred CeEEeCCC----cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707 389 SVYLTKDG----RISM-AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 389 ~Vy~~p~g----Ris~-agl~~~ni~~la~AI~~vv 419 (420)
||++.|.+ ||+. +.++++.|+++.++|.+++
T Consensus 340 Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 340 GLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred CCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 99998865 9998 7889999999999988763
No 179
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=97.13 E-value=0.05 Score=56.86 Aligned_cols=83 Identities=17% Similarity=0.258 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC----CCCceEEe--cCCCHHHHHHHHHhCCeEEeCC------------
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIGMFCY--TGLNATQVEKLIKEHSVYLTKD------------ 395 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~----~q~GmF~~--~~l~~~~v~~Ll~e~~Vy~~p~------------ 395 (420)
++.+.++.++..+.+.+.|+++.. +..+. .+.|+++| -|..+..+...+.+.+|.+-.|
T Consensus 298 ~~~i~~~e~~L~~~~~~~L~~~~~---v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~ 374 (405)
T COG0520 298 MEAIEAHERELTEYLLEGLSELPG---VEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLG 374 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcC
Confidence 456667777888888888887642 34332 35788887 3777888777778888998765
Q ss_pred ----CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 396 ----GRISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ----gRis~agl-~~~ni~~la~AI~~vv 419 (420)
-|+|++-. +.++|++|+++|+++.
T Consensus 375 ~~~~iR~S~~~YNt~edid~l~~aL~~~~ 403 (405)
T COG0520 375 VDATIRASLHLYNTEEDVDRLLEALKKAL 403 (405)
T ss_pred CCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 49999866 5678999999999874
No 180
>PRK09064 5-aminolevulinate synthase; Validated
Probab=97.08 E-value=0.044 Score=56.33 Aligned_cols=81 Identities=20% Similarity=0.242 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe-cCC--C-HHHHHHHHHhCCeEEeC--------C---CcEE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGL--N-ATQVEKLIKEHSVYLTK--------D---GRIS 399 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~-~~l--~-~~~v~~Ll~e~~Vy~~p--------~---gRis 399 (420)
...++++.++++.+.+.|++.| |+.+....+++.. ++. + .+..++|++++||++.+ + -||+
T Consensus 299 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis 374 (407)
T PRK09064 299 NEERERHQERAAKLKAALDAAG----IPVMPNESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRIT 374 (407)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEE
Confidence 3446788999999999999987 5555544443322 332 1 24457787788999964 2 2888
Q ss_pred Ecc-cCCCCHHHHHHHHHHHh
Q psy16707 400 MAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 400 ~ag-l~~~ni~~la~AI~~vv 419 (420)
+.. .+.++++++.++|++++
T Consensus 375 ~~~~~t~edi~~l~~~l~~~~ 395 (407)
T PRK09064 375 PTPFHTDEMIDHLVEALVEVW 395 (407)
T ss_pred eCCCCCHHHHHHHHHHHHHHH
Confidence 753 37889999999998874
No 181
>PRK14012 cysteine desulfurase; Provisional
Probab=97.08 E-value=0.044 Score=56.41 Aligned_cols=97 Identities=18% Similarity=0.035 Sum_probs=63.7
Q ss_pred cccccCCCCCCchHHHHHHHHHHHc--c-CCC-CCCCC------CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 168 GAYRDDQGKPYVLPSVKQADEIVLN--K-NLD-KEYAP------IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 168 G~y~d~dg~~~~~~~V~~a~~~~~~--~-~~~-~~Y~p------~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
..|.|..+..+.++.|.++...... . ..+ +...+ .....++++.+++++ |.+ ++.|
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~-g~~-----~~~v-------- 69 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI-GAD-----PREI-------- 69 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc-CcC-----cCeE--------
Confidence 3688888888899999998866543 1 111 11111 123567788888754 533 2333
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHHh
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPICK 293 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~~ 293 (420)
+.+.|||.++.+++..+.. ..+ ||.|++++++++.....++
T Consensus 70 --------------~~~~g~t~al~~~l~~l~~~~~~~-gd~Vi~~~~~~~s~~~~~~ 112 (404)
T PRK14012 70 --------------VFTSGATESDNLAIKGAAHFYQKK-GKHIITSKTEHKAVLDTCR 112 (404)
T ss_pred --------------EEeCCHHHHHHHHHHHHHHhhcCC-CCEEEEecCccHHHHHHHH
Confidence 5689999999887754432 245 8999999999988765554
No 182
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=97.07 E-value=0.071 Score=54.97 Aligned_cols=78 Identities=18% Similarity=0.275 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe-cCCC---HHHHHHHHHhCCeEEeC--------C-C--cEEEcc
Q psy16707 338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGLN---ATQVEKLIKEHSVYLTK--------D-G--RISMAG 402 (420)
Q Consensus 338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~-~~l~---~~~v~~Ll~e~~Vy~~p--------~-g--Ris~ag 402 (420)
+.+++++++.|.+.|++.| |..+..+..++.. .+.+ .+..++|++++||++.+ + + ||++..
T Consensus 301 ~~~~~~~~~~l~~~L~~~g----~~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~ 376 (406)
T PRK13393 301 RERHQDRVARLRARLDKAG----IPHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSP 376 (406)
T ss_pred HHHHHHHHHHHHHHHHHcC----CCcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECC
Confidence 4677888899999998877 5545444444433 2321 23446777778999854 2 2 887753
Q ss_pred -cCCCCHHHHHHHHHHHh
Q psy16707 403 -VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 -l~~~ni~~la~AI~~vv 419 (420)
.+.++++.+++++.+++
T Consensus 377 ~~t~edid~l~~~l~~~~ 394 (406)
T PRK13393 377 LHTDADIEHLVQALSEIW 394 (406)
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 37788999999998864
No 183
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=96.92 E-value=0.052 Score=56.32 Aligned_cols=106 Identities=21% Similarity=0.247 Sum_probs=71.0
Q ss_pred hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--------cC
Q psy16707 304 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--------TG 375 (420)
Q Consensus 304 ~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--------~~ 375 (420)
..-.+||.+.-......| +.--.+-++...+|.+++.+.+.+.++++|+ +.+. ..+..++ -|
T Consensus 238 ~~p~Tppv~~i~aL~~al-----~~i~~EGle~r~~RH~~~~~a~r~~~~alGl----~~~~-~~~~~s~tvta~~~P~g 307 (383)
T COG0075 238 STPYTPPVNLIYALREAL-----DLILEEGLEARIARHRRLAEALRAGLEALGL----ELFA-DPERRSPTVTAIKVPEG 307 (383)
T ss_pred CCCCCCCHHHHHHHHHHH-----HHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC----cccc-CcccCCCceEEEECCCC
Confidence 444566776666554433 2222233666678899999999999999994 4344 4444442 24
Q ss_pred CCHHHH-HHHHHhCCeEEeCC-----C---cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 376 LNATQV-EKLIKEHSVYLTKD-----G---RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 376 l~~~~v-~~Ll~e~~Vy~~p~-----g---Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
.+.+++ ..++++++|.+.+| | ||+--| ++..++.+...+|..++
T Consensus 308 ~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L 361 (383)
T COG0075 308 VDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAAL 361 (383)
T ss_pred CCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHH
Confidence 454454 46889999999886 2 998777 46777888888887765
No 184
>PRK07550 hypothetical protein; Provisional
Probab=96.90 E-value=0.0089 Score=61.00 Aligned_cols=113 Identities=18% Similarity=0.258 Sum_probs=79.8
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT- 83 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~- 83 (420)
.++..+......++|..+..++..+|++ ..+|. +.++++++..|..+.+.|.+. ..|.. ..+.|+|.+.
T Consensus 256 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~---~~~~~~~~~~~~~l~~~L~~~---~~~~~-~~~g~~~~~~~ 325 (386)
T PRK07550 256 AEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWR---AGNRAEIARRRDAFRAVFARL---PGWEL-LASGAYFAYVR 325 (386)
T ss_pred HHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHH---HHHHHHHHHHHHHHHHHHHhC---CCcee-CCCceEEEEec
Confidence 3455566666778899999999999975 23454 446678888899999999875 23543 3567888886
Q ss_pred ----CCCHHH-HHHHHHhcceEEcCC----------CceecccCCcCCHHHHHHHHHhh
Q psy16707 84 ----GLNATQ-VEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 ----gL~~~q-v~~L~~~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~v 127 (420)
+.+.++ +++|.++++|++.+. =||++++.+.++++...+.|.+.
T Consensus 326 ~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 326 HPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred CCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 444444 566778899999652 27888888777777777766543
No 185
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=96.85 E-value=0.008 Score=61.76 Aligned_cols=82 Identities=16% Similarity=0.121 Sum_probs=60.3
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--------
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------- 86 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------- 86 (420)
+.+++.....++..+|.+. .. +.++.++++++..|+.+.+.|++. ++ |.++..+.|||.+..++
T Consensus 275 ~~~~~~~~q~a~~~~l~~~--~~---~~l~~~~~~~~~~r~~l~~~L~~~--~~-~~~~~p~~g~f~~~~~~~~~~~~~~ 346 (401)
T TIGR01264 275 ILGPCTIVQGALPSILLRT--PQ---EYFDGTLSVLESNAMLCYGALAAV--PG-LRPVMPSGAMYMMVGIEMEHFPEFK 346 (401)
T ss_pred cCCCCcHHHHHHHHHHHhC--cH---HHHHHHHHHHHHHHHHHHHHHHhC--CC-CcccCCCeeeEEEEEecccccCCCC
Confidence 3445555666678888651 23 446667788888999999999875 34 77788899999999863
Q ss_pred --HHHHHHHHHhcceEEcCC
Q psy16707 87 --ATQVEKLIKEHSVYLTKD 104 (420)
Q Consensus 87 --~~qv~~L~~~~~IY~~~~ 104 (420)
.+.++.|.++++|++.+.
T Consensus 347 ~~~~~~~~l~~~~gI~v~pg 366 (401)
T TIGR01264 347 NDVEFTERLVAEQSVFCLPG 366 (401)
T ss_pred CHHHHHHHHHHhCCEEEeCc
Confidence 345678888899998754
No 186
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=96.85 E-value=0.01 Score=62.57 Aligned_cols=107 Identities=14% Similarity=0.390 Sum_probs=76.9
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHH----
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNAT---- 88 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~---- 88 (420)
..|+++|.....+++.+|+|+++..+| ++++++|++..|+.+.+.|++.+. .++.-+-|||.+..|++-
T Consensus 306 ~~~~~~s~~~q~~~~~~L~d~~~~~~~---l~~~r~~l~~~~~~~~~~L~~~gi----~~~~~~ag~fvw~~L~~~~~~~ 378 (447)
T PLN02607 306 SSFTLVSSQTQHLLASMLSDEEFTENY---IRTNRERLRKRYEMIVQGLRRAGI----ECLKGNAGLFCWMNLSPLLETP 378 (447)
T ss_pred hhcCCCCHHHHHHHHHHhCCchhHHHH---HHHHHHHHHHHHHHHHHHHHhCCC----CcccCCeeEEEEEEchHhhcCC
Confidence 345567777889999999998876666 456789999999999999998653 456678899999988631
Q ss_pred ------H-HHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHh
Q psy16707 89 ------Q-VEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 89 ------q-v~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~ 126 (420)
+ .++|.++++|++.+.. ||+++.++...++.-.+.|.+
T Consensus 379 ~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~ 433 (447)
T PLN02607 379 TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHR 433 (447)
T ss_pred CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Confidence 2 3467788999987632 466666555555544444433
No 187
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=96.79 E-value=0.011 Score=61.48 Aligned_cols=103 Identities=17% Similarity=0.174 Sum_probs=80.4
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEK 92 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~ 92 (420)
.++|.....++...|++++ |.+-++.+++.++..|..+.+.|++.+ |.+...+.|||.+..++ .+-++.
T Consensus 312 ~~~s~~~q~a~~~~l~~~~----~~~~l~~~~~~~~~~r~~~~~~L~~~~----~~~~~p~gg~f~~~~l~~~~~~~~~~ 383 (431)
T PRK15481 312 QWVSHLLQDLVYACLTDPE----YQARLAQARLFYAQRRQKLARALQQYG----IAIPSPGDGLNLWLPLDTDSQATALT 383 (431)
T ss_pred cCCCHHHHHHHHHHHhCcc----HHHHHHHHHHHHHHHHHHHHHHHHHcC----CccccCCCeEEEEEECCCCHHHHHHH
Confidence 3467778899999998854 455577889999999999999998763 55556789999999885 345555
Q ss_pred HHHhcceEEcC----------C-CceecccCCcCCHHHHHHHHHhh
Q psy16707 93 LIKEHSVYLTK----------D-GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 93 L~~~~~IY~~~----------~-GRinvagl~~~ni~~va~ai~~v 127 (420)
|. +++|.+.+ + =|||++.+++.+++..++.|+++
T Consensus 384 l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 428 (431)
T PRK15481 384 LA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQA 428 (431)
T ss_pred HH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHH
Confidence 64 67876654 1 29999999999999999998876
No 188
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.75 E-value=0.061 Score=56.22 Aligned_cols=99 Identities=15% Similarity=-0.008 Sum_probs=61.9
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
.+...+|+.-|.+-..=| ...|.|.+|..+..++ ..+.|.+..+..+|.+.+++++-+ .+++
T Consensus 48 dG~~~lD~~~g~~~~~lG--h~~p~i~~a~~~~~~~-~~~~~~~~~~~~~la~~L~~~~~~-------~~~v-------- 109 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILG--HAHPEVVEAVIEAAEK-GLSFGAPTELEVELAELVIELVPS-------IEMV-------- 109 (426)
T ss_pred CCCEEEEcccchhhhhcC--CCCHHHHHHHHHHHHh-CCcCCCCCHHHHHHHHHHHHhCCC-------CCEE--------
Confidence 356789998885433435 2445555555544443 345567777888888888876522 1244
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
..+.||+.|...+..+...+.. .+.|+..+++|..+.
T Consensus 110 --------------~~~~sGseA~e~Aik~a~~~~g-~~~ii~~~~~yHG~t 146 (426)
T PRK00062 110 --------------RMVNSGTEATMSAIRLARGYTG-RDKIIKFEGCYHGHA 146 (426)
T ss_pred --------------EEecCHHHHHHHHHHHHHHHhC-CCeEEEEcCccCCch
Confidence 4588899888887775443333 567777777666654
No 189
>PRK05957 aspartate aminotransferase; Provisional
Probab=96.72 E-value=0.014 Score=59.83 Aligned_cols=106 Identities=21% Similarity=0.242 Sum_probs=70.0
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDP-KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~-~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
.+++.......+.++|.+...++...|+++ +..++|. ++++..|+.+.+.|++.+ +-|.....+-|||.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~-------~~~~~~r~~l~~~L~~~~--~~~~~~~~~gg~~~~ 322 (389)
T PRK05957 252 LEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHL-------PEIAQVRQILLKSLGQLQ--DRCTLHPANGAFYCF 322 (389)
T ss_pred HHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHH-------HHHHHHHHHHHHHHHhcC--CCccccCCCeeEEEE
Confidence 355666666666788889999999999874 3333333 446777888999998642 223333456688886
Q ss_pred c----CCCH-HHHHHHHHhcceEEcCC--------C--ceecccCCcCCHH
Q psy16707 83 T----GLNA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVG 118 (420)
Q Consensus 83 ~----gL~~-~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~ 118 (420)
+ +++. +-++.|.++++|++.+. | |||++.+++..+.
T Consensus 323 ~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~ 373 (389)
T PRK05957 323 LKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAK 373 (389)
T ss_pred EeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHH
Confidence 5 4444 45677888899999863 1 7777776655433
No 190
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=96.72 E-value=0.082 Score=54.75 Aligned_cols=84 Identities=13% Similarity=0.109 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC------HHHHHHHHHhCCeEEeCCC----cEEEcc-cC
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------ATQVEKLIKEHSVYLTKDG----RISMAG-VT 404 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~------~~~v~~Ll~e~~Vy~~p~g----Ris~ag-l~ 404 (420)
.++++++++++.+.+.|++++....+-......|++.++.++ ...+...+.++||++.+.| ||+++. ++
T Consensus 303 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t 382 (406)
T PRK12381 303 EMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNIS 382 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCC
Confidence 456888999999999998875322222223355788765432 2344445578999998644 887765 78
Q ss_pred CCCHHHHHHHHHHHh
Q psy16707 405 SKNVGYLAKAIHAVT 419 (420)
Q Consensus 405 ~~ni~~la~AI~~vv 419 (420)
+++|+.+.+++.+++
T Consensus 383 ~~~i~~~~~~l~~~l 397 (406)
T PRK12381 383 EEEITTGLDRFARAC 397 (406)
T ss_pred HHHHHHHHHHHHHHH
Confidence 889999999888765
No 191
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=96.67 E-value=0.13 Score=51.75 Aligned_cols=93 Identities=17% Similarity=0.059 Sum_probs=57.5
Q ss_pred cccCCCCCCchHHHHHHHHHHHccC-C-CCCCCCCCC------CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707 170 YRDDQGKPYVLPSVKQADEIVLNKN-L-DKEYAPIIG------APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL 241 (420)
Q Consensus 170 y~d~dg~~~~~~~V~~a~~~~~~~~-~-~~~Y~p~~G------~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 241 (420)
|.|..+..++++.|++|......+. . .+.+.+..| ..++|+.+++++ |.+ ++.|
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~-----~~~v------------ 62 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL-GAD-----TEEV------------ 62 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeE------------
Confidence 6677777889999999987765321 1 111111112 457778888754 432 2333
Q ss_pred ccccccccceeecccchHHHHHHHHHHHhc--CCCC-CEEEEcCCCCCCcHHH
Q psy16707 242 RVGAAFQISIVQGISGTGSLRVGAAFLKNF--FPGE-KVIYVPTPTWGNHIPI 291 (420)
Q Consensus 242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--~p~g-d~VlvpdP~w~ny~~i 291 (420)
+.|.|+|.++.+++..+... .+ | +.|++++..+|.+...
T Consensus 63 ----------~~~~g~t~a~~~~l~~l~~~~~~~-g~~~vi~~~~~~~s~~~~ 104 (353)
T TIGR03235 63 ----------IFTSGATESNNLAILGLARAGEQK-GKKHIITSAIEHPAVLEP 104 (353)
T ss_pred ----------EEeCCHHHHHHHHHHHHHHhcccC-CCCeeeEcccccHHHHHH
Confidence 56889999988877644332 23 5 7888887777765433
No 192
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=96.65 E-value=0.13 Score=53.62 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccC----CCCceEEec--CCCHHHHHHHHHhCCeEEeC--------------C
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIGMFCYT--GLNATQVEKLIKEHSVYLTK--------------D 395 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~----~q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p--------------~ 395 (420)
+.++++.+..+.|.+.|++.|. ..+. .+.+...+- +.+...+...+++.||++.+ .
T Consensus 286 ~~~~~l~~~a~~l~~~L~~~G~----~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~ 361 (416)
T PRK13034 286 TYAKQVIANAQALAEVLKERGY----DLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSG 361 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC----EeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCe
Confidence 3446777777778888888883 3322 233333332 33455564555889999974 1
Q ss_pred CcEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707 396 GRISMAG-----VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 gRis~ag-----l~~~ni~~la~AI~~vv 419 (420)
-|+++.. .+++.|+.++++|.+++
T Consensus 362 lR~~~~~~t~~~~~~~di~~l~~~l~~~~ 390 (416)
T PRK13034 362 IRIGTPAGTTRGFGEAEFREIANWILDVL 390 (416)
T ss_pred eEeCcHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 2877654 45699999999999875
No 193
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=96.49 E-value=0.29 Score=49.44 Aligned_cols=40 Identities=25% Similarity=0.383 Sum_probs=31.6
Q ss_pred HHHHHHHHhCCeEEeCCC-----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 379 TQVEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 379 ~~v~~Ll~e~~Vy~~p~g-----Ris~agl~~~ni~~la~AI~~vv 419 (420)
+..++| .++||++...| ||+..|.+.+.++++.++|.++.
T Consensus 316 ~~~~~L-~~~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 316 FLYSEL-KKRGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hHHHHH-HHcCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 355777 56799975533 89988889999999999998764
No 194
>PLN02271 serine hydroxymethyltransferase
Probab=96.44 E-value=0.25 Score=53.75 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEe----cCCCHHHHHHHHHhCCeEEeC-----------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCY----TGLNATQVEKLIKEHSVYLTK----------- 394 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p----------- 394 (420)
.|.+.+.+.+.+.-++|.+.|.+.|.+ .+.. ..=++.+ .|++-..+++++++.||.+-+
T Consensus 431 ~efk~Ya~QVv~NAkaLA~~L~~~G~~----vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~ 506 (586)
T PLN02271 431 PEYKAYMQQVKKNAQALASALLRRKCR----LVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTIS 506 (586)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHCCCe----EeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCC
Confidence 455677778888888999999988843 2221 1122322 256778899999999999843
Q ss_pred -CC-cEEEccc-----CCCCHHHHHHHHHHHhC
Q psy16707 395 -DG-RISMAGV-----TSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 395 -~g-Ris~agl-----~~~ni~~la~AI~~vv~ 420 (420)
+| ||....+ .+++++.+|+-|+++++
T Consensus 507 psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 507 PGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 33 8876544 56788999999998863
No 195
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=96.32 E-value=0.3 Score=50.93 Aligned_cols=102 Identities=11% Similarity=0.009 Sum_probs=60.3
Q ss_pred CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--------C---
Q psy16707 309 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--------N--- 377 (420)
Q Consensus 309 pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--------~--- 377 (420)
++...+.++...|+. .++.+.++.++...+.+|+.+.+.++..+ +.......|+|.|+-+ +
T Consensus 300 ~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~~~----~~~~v~g~G~~~~l~l~~~~~~~~p~~~ 371 (425)
T PRK08088 300 GNPIACAAALAVLKV----FEQENLLQKANALGEKLKDGLLAIAEKHP----EIGDVRGLGAMIAIELFEDGDHSKPNAK 371 (425)
T ss_pred cCHHHHHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHHHHHHhCC----CeEEEeccceEEEEEEecCCCCCCCCHH
Confidence 344556666655532 13335555555555555555554444433 1112334499998754 1
Q ss_pred -HH-HHHHHHHhCCeEEeCCC------cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 378 -AT-QVEKLIKEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 378 -~~-~v~~Ll~e~~Vy~~p~g------Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
.. .++.+ .+.||.+.|++ ||+++. +++++|+...+++.+++
T Consensus 372 ~~~~l~~~~-~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l 421 (425)
T PRK08088 372 LTAQIVARA-RDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCF 421 (425)
T ss_pred HHHHHHHHH-HhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHH
Confidence 22 33444 57798887753 999994 67889999888888775
No 196
>PLN02242 methionine gamma-lyase
Probab=96.27 E-value=0.092 Score=54.98 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=31.9
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.+.||+.|+.+++..+ +.| ||.|++++|.|+.|...+
T Consensus 95 l~~~sG~~Ai~~al~al--~~~-GD~Vl~~~~~Y~~~~~~~ 132 (418)
T PLN02242 95 YCTASGMSAISSVLLQL--CSS-GGHVVASNTLYGGTHALL 132 (418)
T ss_pred EEEccHHHHHHHHHHHH--hCC-CCEEEEcCCcHHHHHHHH
Confidence 56999999999987644 457 999999999999997765
No 197
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=96.25 E-value=0.12 Score=52.95 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=27.6
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
+.+.||+.|+.++..+ +.| ||.|++++|+|+....
T Consensus 71 ~~~~sG~~ai~~~~~l---l~~-Gd~Vl~~~~~y~~t~~ 105 (366)
T PRK08247 71 FACSSGMAAIQLVMSL---FRS-GDELIVSSDLYGGTYR 105 (366)
T ss_pred EEEcCHHHHHHHHHHH---hCC-CCEEEEecCCcCcHHH
Confidence 5688999999876543 347 8999999999997443
No 198
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=96.19 E-value=0.29 Score=49.63 Aligned_cols=92 Identities=21% Similarity=0.124 Sum_probs=56.0
Q ss_pred cccCCCCCCchHHHHHHHHHHHccC-CCC-CCCCCC------CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707 170 YRDDQGKPYVLPSVKQADEIVLNKN-LDK-EYAPII------GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL 241 (420)
Q Consensus 170 y~d~dg~~~~~~~V~~a~~~~~~~~-~~~-~Y~p~~------G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 241 (420)
|.|..|-.+.++.|.++......+. .+. +-.... -+.+.|+.+++++ |... ++.|
T Consensus 2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l-g~~~----~~~v------------ 64 (371)
T PF00266_consen 2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL-GAPP----DEEV------------ 64 (371)
T ss_dssp EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH-TSST----TEEE------------
T ss_pred EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc-CCcc----cccc------------
Confidence 7788887888999988887765431 100 000111 1246677777765 4331 1233
Q ss_pred ccccccccceeecccchHHHHHHHHHHH-hcCCCCCEEEEcCCCCCCcH
Q psy16707 242 RVGAAFQISIVQGISGTGSLRVGAAFLK-NFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~-~~~p~gd~VlvpdP~w~ny~ 289 (420)
+.+.|+|.++..++.-+. .+.+ |+.|++.+=.++.-.
T Consensus 65 ----------~~~~~~t~a~~~~~~~l~~~~~~-g~~vl~~~~~~~s~~ 102 (371)
T PF00266_consen 65 ----------VFTSNGTEALNAVASSLLNPLKP-GDEVLVTSNEHPSNR 102 (371)
T ss_dssp ----------EEESSHHHHHHHHHHHHHHHGTT-TCEEEEEESSHHHHH
T ss_pred ----------ccccccchhhhhhhhcccccccc-ccccccccccccccc
Confidence 568999999998876552 1456 899999887777666
No 199
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=96.17 E-value=0.048 Score=57.83 Aligned_cols=107 Identities=15% Similarity=0.353 Sum_probs=80.7
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH------
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA------ 87 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~------ 87 (420)
.|+++|...-.+++.+|+|+++...|. ++++++++..|+.+.+.|++.+ |.++.-+-|||.+.-|++
T Consensus 300 ~~~~~s~~~Q~a~~~~L~~~~~~~~~l---~~~~~~l~~rr~~l~~~L~~~g----i~~~~~~~g~flwi~l~~~~~~~~ 372 (468)
T PLN02450 300 SFGLVSSQTQYLLSALLSDKKFTKNYL---EENQKRLKQRQKKLVSGLEAAG----IKCLKSNAGLFCWVDMRHLLKSNT 372 (468)
T ss_pred hcCCCCHHHHHHHHHHhCCchhHHHHH---HHHHHHHHHHHHHHHHHHHHcC----CcccCCCceEEEEEEchHhcCcCC
Confidence 455567778889999999977655554 4568899999999999998864 556678899999988753
Q ss_pred -----HHHHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHhh
Q psy16707 88 -----TQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 -----~qv~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v 127 (420)
+-.+.|.++++|.+.+.. ||++++++...++...+.|.++
T Consensus 373 ~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~ 427 (468)
T PLN02450 373 FEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSF 427 (468)
T ss_pred chHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 124456678899986642 6888888888877777777665
No 200
>PRK06234 methionine gamma-lyase; Provisional
Probab=96.08 E-value=0.017 Score=59.95 Aligned_cols=69 Identities=17% Similarity=0.182 Sum_probs=52.4
Q ss_pred CCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707 197 KEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG 274 (420)
Q Consensus 197 ~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~ 274 (420)
+.|. |..+..+|+++++++.-+++ + +.+.||++|+..++..+ +.|
T Consensus 56 ~~Y~r~~~p~~~~Le~~iA~~~g~~~--------~----------------------l~~~sG~~Ai~~al~~l--l~~- 102 (400)
T PRK06234 56 YIYSRLGNPTSTEVENKLALLEGGEA--------A----------------------VVAASGMGAISSSLWSA--LKA- 102 (400)
T ss_pred CcccCCCCccHHHHHHHHHHHhCCCc--------E----------------------EEEcCHHHHHHHHHHHH--hCC-
Confidence 4477 88899999999999874321 1 57999999998776433 557
Q ss_pred CCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 275 EKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 275 gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
||.|++++|.|+.+...+ +..|++
T Consensus 103 Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~ 130 (400)
T PRK06234 103 GDHVVASDTLYGCTFALLNHGLTRYGVE 130 (400)
T ss_pred CCEEEEecCccchHHHHHHHHHhhCCeE
Confidence 999999999999877654 445654
No 201
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=96.06 E-value=0.022 Score=58.20 Aligned_cols=68 Identities=18% Similarity=0.165 Sum_probs=52.3
Q ss_pred CCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEE
Q psy16707 199 YAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVI 278 (420)
Q Consensus 199 Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~V 278 (420)
|.+-.+..+|++++++++ |.. .. +.+.|||.|+.+++..+ .+.| ||+|
T Consensus 25 ~~~g~~~~~le~~la~~~-g~~-------~~----------------------v~~~sgt~al~~~l~al-~~~~-Gd~V 72 (380)
T TIGR03588 25 LTQGPTVPAFEEALAEYV-GAK-------YA----------------------VAFNSATSALHIACLAL-GVGP-GDRV 72 (380)
T ss_pred ccCChhHHHHHHHHHHHH-CCC-------eE----------------------EEEcCHHHHHHHHHHHc-CCCC-CCEE
Confidence 444456799999999976 432 11 34668999999988754 2457 9999
Q ss_pred EEcCCCCCCcHHHHhhcCcc
Q psy16707 279 YVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 279 lvpdP~w~ny~~i~~~aG~~ 298 (420)
++|+|+|+.+...++..|++
T Consensus 73 iv~~~~~~~~~~~~~~~G~~ 92 (380)
T TIGR03588 73 WTTPITFVATANCALYCGAK 92 (380)
T ss_pred EeCCcchHHHHHHHHHcCCE
Confidence 99999999999888888876
No 202
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=96.04 E-value=0.021 Score=58.60 Aligned_cols=63 Identities=17% Similarity=0.250 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCC
Q psy16707 204 GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTP 283 (420)
Q Consensus 204 G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP 283 (420)
...+|++++++++ |.. .+ +.+.|||.|+.+++..+. +.| ||+|++|+|
T Consensus 34 ~~~~le~~la~~~-g~~-------~~----------------------v~~~sgt~al~lal~al~-~~~-Gd~Viv~~~ 81 (379)
T PRK11658 34 KNQALEQAFCQLT-GNQ-------HA----------------------IAVSSATAGMHITLMALG-IGP-GDEVITPSL 81 (379)
T ss_pred hHHHHHHHHHHHh-CCC-------eE----------------------EEECCHHHHHHHHHHHcC-CCC-CCEEEECCC
Confidence 5799999999866 432 12 568999999999886542 457 999999999
Q ss_pred CCCCcHHHHhhcCcc
Q psy16707 284 TWGNHIPICKHTGLE 298 (420)
Q Consensus 284 ~w~ny~~i~~~aG~~ 298 (420)
+|+.+...+..+|++
T Consensus 82 ~~~~~~~~~~~~G~~ 96 (379)
T PRK11658 82 TWVSTLNMIVLLGAT 96 (379)
T ss_pred cHHHHHHHHHHcCCE
Confidence 999999888888875
No 203
>PRK05764 aspartate aminotransferase; Provisional
Probab=96.00 E-value=0.069 Score=54.41 Aligned_cols=114 Identities=17% Similarity=0.142 Sum_probs=76.1
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
.++++.+.+..+++++......+..+|++ ...| ++.++++++..|..|.+.|+++ ++ |....-+-|+|.+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~---~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~g~~~~~~ 327 (393)
T PRK05764 257 IKAMSKLQSHSTSNPTSIAQYAAVAALNG---PQDE---VEEMRQAFEERRDLMVDGLNEI--PG-LECPKPEGAFYVFP 327 (393)
T ss_pred HHHHHHHHhhcccCCChHHHHHHHHHHcC---ChHH---HHHHHHHHHHHHHHHHHHHhhC--CC-CcccCCCcceEEEE
Confidence 34566666667777777887888888873 1234 4556777788888888888875 22 55555666777665
Q ss_pred CCC----------HHHHHHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 84 GLN----------ATQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 gL~----------~~qv~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
-+. .+-++.|.++++|++.+. | ||+++. +..+++..+++|.++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~-~~~~~~~~i~~l~~~ 388 (393)
T PRK05764 328 NVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT-SLEDLEEGLERIERF 388 (393)
T ss_pred ecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC-CHHHHHHHHHHHHHH
Confidence 333 233567778899998653 2 888765 667777666666554
No 204
>PRK07681 aspartate aminotransferase; Provisional
Probab=95.98 E-value=0.07 Score=54.82 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=73.3
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----HHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVE 91 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-----~~qv~ 91 (420)
+++.-...++...|.+.. .|. +.++++++..|..|.+.|++.+ |.....+.|+|.+.-++ .+-++
T Consensus 271 ~~s~~~q~~~~~~l~~~~---~~~---~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~~g~f~~~~l~~~~~~~~~~~ 340 (399)
T PRK07681 271 GVFLPIQKAACAALRNGA---AFC---EKNRGIYQERRDTLVDGFRTFG----WNVDKPAGSMFVWAEIPKGWTSLSFAY 340 (399)
T ss_pred CCCHHHHHHHHHHHhCcH---HHH---HHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeeEEEEECCCCCCHHHHHH
Confidence 455556677788887753 454 4456678888999999998753 55556678999887553 34567
Q ss_pred HHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhhCCCc
Q psy16707 92 KLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHANGSLP 131 (420)
Q Consensus 92 ~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v~~~p 131 (420)
.|.++++|++.+. | ||+++ .+...++...+.|.++|-+.
T Consensus 341 ~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~~~~l~~l~~~~~~~ 389 (399)
T PRK07681 341 ALMDRANVVVTPGHAFGPHGEGFVRIALV-QDEEVLQQAVENIRNSGIFA 389 (399)
T ss_pred HHHHhCCEEEeCChhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHhcccc
Confidence 8888899988642 2 77777 35678888888888877544
No 205
>PRK07582 cystathionine gamma-lyase; Validated
Probab=95.92 E-value=0.44 Score=48.83 Aligned_cols=59 Identities=14% Similarity=0.140 Sum_probs=46.1
Q ss_pred CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707 201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV 280 (420)
Q Consensus 201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv 280 (420)
|.....+|.++++++. +.+ . +.+.+|+.|+..++..+ +.| ||+|++
T Consensus 49 ~~p~~~~Le~~lA~l~-~~~--------~----------------------v~~~sG~~Ai~~~l~al--l~~-Gd~Vl~ 94 (366)
T PRK07582 49 SNPTWRALEAALGELE-GAE--------A----------------------LVFPSGMAAITAVLRAL--LRP-GDTVVV 94 (366)
T ss_pred CCccHHHHHHHHHHHc-CCC--------E----------------------EEECCHHHHHHHHHHHh--cCC-CCEEEE
Confidence 6778899999999987 432 1 56888999988776533 457 999999
Q ss_pred cCCCCCCcHHHHh
Q psy16707 281 PTPTWGNHIPICK 293 (420)
Q Consensus 281 pdP~w~ny~~i~~ 293 (420)
++|+|+.|...++
T Consensus 95 ~~~~y~~~~~~~~ 107 (366)
T PRK07582 95 PADGYYQVRALAR 107 (366)
T ss_pred eCCCcHhHHHHHH
Confidence 9999999877553
No 206
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=95.91 E-value=0.031 Score=57.62 Aligned_cols=83 Identities=16% Similarity=0.131 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCCC----cEEEccc-
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG----RISMAGV- 403 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~g----Ris~agl- 403 (420)
.+.++++++++.|.+.|++++....+....+..|+|.|..+ +.++++.|+ +.||++.|+| ||+++..
T Consensus 304 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~~lRl~~~~~~ 382 (403)
T PRK05093 304 EVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAA-EEGVMVLVAGPDVLRFAPSLVI 382 (403)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHH-HCCeEEecCCCCEEEEeCCCCC
Confidence 34478899999999999987532112223445688888644 235567775 5799999855 8865555
Q ss_pred CCCCHHHHHHHHHHHh
Q psy16707 404 TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 404 ~~~ni~~la~AI~~vv 419 (420)
+++.|+++.+++.+++
T Consensus 383 ~~~~i~~~~~~l~~~l 398 (403)
T PRK05093 383 EEADIDEGLARFEKAV 398 (403)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8888998888887764
No 207
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=95.88 E-value=0.49 Score=49.17 Aligned_cols=84 Identities=21% Similarity=0.381 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC---CCCceEEe----cCCCHHHHHHHHHhCCeEEeCC---------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT---DQIGMFCY----TGLNATQVEKLIKEHSVYLTKD--------- 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~---~q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p~--------- 395 (420)
-+.+++.+++.+.-.+|.++|.+.|. ..+. ... +|.- .+++-..++.++++.||-+-++
T Consensus 280 p~fk~Ya~qVv~NAkaLAe~l~~~G~----~vvsGgTdnH-l~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p 354 (413)
T COG0112 280 PEFKEYAKQVVKNAKALAEALKERGF----KVVSGGTDNH-LVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESP 354 (413)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCC----eEecCCccce-EEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCC
Confidence 44566667778888899999998883 3332 111 2221 1566789999999999999653
Q ss_pred ----C-cEEEccc-----CCCCHHHHHHHHHHHhC
Q psy16707 396 ----G-RISMAGV-----TSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 396 ----g-Ris~agl-----~~~ni~~la~AI~~vv~ 420 (420)
| ||....+ .+++.+++|+-|.+|+.
T Consensus 355 ~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 355 FVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred CCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 3 8876654 45578899999998863
No 208
>PLN02651 cysteine desulfurase
Probab=95.82 E-value=0.63 Score=47.13 Aligned_cols=91 Identities=20% Similarity=0.105 Sum_probs=56.7
Q ss_pred cccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC-----C------CHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 170 YRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII-----G------APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 170 y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~-----G------~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
|.|..+-.++++.|.+|......+ +.-.|.. + ..++|+.+++++ |.+ ++.|
T Consensus 2 Yld~a~~~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~-----~~~v--------- 63 (364)
T PLN02651 2 YLDMQATTPIDPRVLDAMLPFLIE---HFGNPHSRTHLYGWESEDAVEKARAQVAALI-GAD-----PKEI--------- 63 (364)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHh---CCCCCChhhhHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeE---------
Confidence 778888778889999988765432 1111211 1 345566676643 432 2333
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHH
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.|.|||.++.+++..+.. ..+ ||.|++++-.++++...+
T Consensus 64 -------------~~t~~~t~a~~~~l~~~~~~~~~~-g~~vl~~~~~h~s~~~~~ 105 (364)
T PLN02651 64 -------------IFTSGATESNNLAIKGVMHFYKDK-KKHVITTQTEHKCVLDSC 105 (364)
T ss_pred -------------EEeCCHHHHHHHHHHHHHHhccCC-CCEEEEcccccHHHHHHH
Confidence 5688999998877654322 235 899999997777654433
No 209
>PTZ00377 alanine aminotransferase; Provisional
Probab=95.77 E-value=0.088 Score=55.80 Aligned_cols=117 Identities=12% Similarity=0.153 Sum_probs=78.0
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccce
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF 80 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~----~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmF 80 (420)
.++..+.. .+.+++..+-.++..+|+++ ...+.|.++++.++.+++..|..+.+.|++. ++ |....-|-|||
T Consensus 323 ~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~--~g-~~~~~p~gg~f 398 (481)
T PTZ00377 323 EQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKI--EG-VSCQPVEGAMY 398 (481)
T ss_pred HHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-cEeecCCeeEE
Confidence 34444443 34457777888888899764 3456799999999999999999999999865 33 77777888999
Q ss_pred eecCC--CH---------------HHHHHHHHhcceEEcCCC-----------ceecccCCcCCHHHHHHHHHh
Q psy16707 81 CYTGL--NA---------------TQVEKLIKEHSVYLTKDG-----------RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 81 s~~gL--~~---------------~qv~~L~~~~~IY~~~~G-----------Rinvagl~~~ni~~va~ai~~ 126 (420)
.+.-+ .+ +-+..|-++++|-+.+.. |||++ .+..+++...+.|.+
T Consensus 399 l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~ 471 (481)
T PTZ00377 399 AFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKE 471 (481)
T ss_pred EEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHH
Confidence 98433 21 224566678888876422 45655 444444444444433
No 210
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=95.69 E-value=0.11 Score=52.60 Aligned_cols=107 Identities=13% Similarity=0.210 Sum_probs=66.6
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
+++...+....++|.....++..+|.++ +| ++.++.+++..|..+.+.|++.+ |....-+.|||.+..+
T Consensus 244 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 312 (364)
T PRK07865 244 ELLEVRKHAGMMVPAPVQAAMVAALGDD----AH---VREQRERYARRRAVLRPALEAAG----FRVDHSEAGLYLWATR 312 (364)
T ss_pred HHHHHHHhcCCCcCHHHHHHHHHHhCCH----HH---HHHHHHHHHHHHHHHHHHHHHcC----CcccCCCccEEEEEeC
Confidence 3444333333455666777788888873 23 45667777888999999998753 4444567899988765
Q ss_pred C--HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHH
Q psy16707 86 N--ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAI 124 (420)
Q Consensus 86 ~--~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai 124 (420)
. ..++..+-++++|++.+. + ||++++ +..+++..++.|
T Consensus 313 ~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l 362 (364)
T PRK07865 313 GEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERL 362 (364)
T ss_pred CCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHh
Confidence 3 334433336789998652 1 677765 455555554443
No 211
>PRK09105 putative aminotransferase; Provisional
Probab=95.67 E-value=0.11 Score=53.05 Aligned_cols=100 Identities=16% Similarity=0.212 Sum_probs=67.4
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee-cCCCHHHH-H
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGLNATQV-E 91 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~-~gL~~~qv-~ 91 (420)
.++++|..+..++...|.++ +|. +.++++++..|+.+.+.|++.+ |..+..+-|+|.+ ++.+.+++ +
T Consensus 259 ~~~~~~~~~~~aa~~~L~~~----~~~---~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~~f~~~~~~~~~~~l~~ 327 (370)
T PRK09105 259 GHNPLPVPAAAAGLASLRDP----KLV---PQRRAENAAVREDTIAWLKKKG----YKCTPSQANCFMVDVKRPAKAVAD 327 (370)
T ss_pred CCCCcCHHHHHHHHHHHhCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CCcCCCCCcEEEEeCCCCHHHHHH
Confidence 45667888888888889874 454 4455677888999999998753 5555556666653 13344444 4
Q ss_pred HHHHhcceEEc-------CCCceecccCCcCCHHHHHHHHHhh
Q psy16707 92 KLIKEHSVYLT-------KDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 92 ~L~~~~~IY~~-------~~GRinvagl~~~ni~~va~ai~~v 127 (420)
.|. +++|++. .--||+++ ++.++++++++++++
T Consensus 328 ~L~-~~gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~ 367 (370)
T PRK09105 328 AMA-KQGVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKV 367 (370)
T ss_pred HHH-HCCcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHH
Confidence 565 5599882 12366666 467899999999875
No 212
>PRK07682 hypothetical protein; Validated
Probab=95.63 E-value=0.12 Score=52.50 Aligned_cols=110 Identities=17% Similarity=0.169 Sum_probs=72.1
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-- 83 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-- 83 (420)
.++.+....+.++|.....++..+|++.+ .| ++.++++++..|..+.+.|++.+ +....-+-|||.+.
T Consensus 247 ~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~---~~~~~~~~~~~~~~~~~~L~~~~----~~~~~p~g~~~~~~~~ 316 (378)
T PRK07682 247 AMLKIHQYSMMCAPTMAQFAALEALRAGN---DD---VIRMRDSYRKRRNFFVTSFNEIG----LTCHVPGGAFYAFPSI 316 (378)
T ss_pred HHHHHHHhhccCCCHHHHHHHHHHHhCCh---HH---HHHHHHHHHHHHHHHHHHHHHCC----CccCCCCeeEEEEEec
Confidence 44444444445677777788888887642 24 67788888899999999998763 44455678899886
Q ss_pred ---CCCHHHHH-HHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHh
Q psy16707 84 ---GLNATQVE-KLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 84 ---gL~~~qv~-~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~ 126 (420)
+.+.++.. .|.++++|++.+. | |||++. +...++...+.|.+
T Consensus 317 ~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~ 372 (378)
T PRK07682 317 SSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKR 372 (378)
T ss_pred cCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHH
Confidence 34555554 5667889998752 2 677764 44454444444443
No 213
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=95.51 E-value=0.029 Score=59.06 Aligned_cols=63 Identities=16% Similarity=0.161 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHH-------hcCCCCCE
Q psy16707 205 APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK-------NFFPGEKV 277 (420)
Q Consensus 205 ~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~-------~~~p~gd~ 277 (420)
..+|++++++++ |.+ .+ +.+.|||.|+.+++..+. .+.| ||+
T Consensus 65 ~~~fe~~lA~~~-g~~-------~~----------------------v~~~sGt~al~~aL~al~~~~~~~~~~~p-Gd~ 113 (438)
T PRK15407 65 NDAFEKKLAEFL-GVR-------YA----------------------LLVNSGSSANLLAFSALTSPKLGDRALKP-GDE 113 (438)
T ss_pred HHHHHHHHHHHh-CCC-------eE----------------------EEECCHHHHHHHHHHHHhhccccccCCCC-CCE
Confidence 378999999876 432 22 568999999998876542 3467 999
Q ss_pred EEEcCCCCCCcHHHHhhcCcc
Q psy16707 278 IYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 278 VlvpdP~w~ny~~i~~~aG~~ 298 (420)
|++|+|+|+.+...+...|++
T Consensus 114 VIv~~~t~~a~~~~v~~~G~~ 134 (438)
T PRK15407 114 VITVAAGFPTTVNPIIQNGLV 134 (438)
T ss_pred EEECCCCcHHHHHHHHHcCCE
Confidence 999999999999988888885
No 214
>PRK08068 transaminase; Reviewed
Probab=95.36 E-value=0.16 Score=51.98 Aligned_cols=108 Identities=18% Similarity=0.285 Sum_probs=66.7
Q ss_pred HHHHHHhhccC-CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 5 NAKKILIRAFY-SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 5 ~~l~~i~R~~y-S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
..++.+....+ |++|.....+.+.+++++ +.++.++++++..|..+.+.|++.+ |....-+-|+|.+.
T Consensus 260 ~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~~r~~~~~~L~~~g----~~~~~~~g~~~~~v 328 (389)
T PRK08068 260 EAINLLQDHLFVSLFGAIQDAAIEALLSDQ-------SCVAELVARYESRRNAFISACREIG----WEVDAPKGSFFAWM 328 (389)
T ss_pred HHHHHHHhhccCCCChHHHHHHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEE
Confidence 34444444433 334444444444555543 3466778899999999999998763 65555577888776
Q ss_pred CC----CHHHH-HHHHHhcceEEcCC------C----ceecccCCcCCHHHHHHHHHhh
Q psy16707 84 GL----NATQV-EKLIKEHSVYLTKD------G----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 gL----~~~qv-~~L~~~~~IY~~~~------G----Rinvagl~~~ni~~va~ai~~v 127 (420)
-+ +.+++ +.|.++++|++.+. | ||+++ .+. +.+.+++...
T Consensus 329 ~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~---~~l~~al~~l 383 (389)
T PRK08068 329 PVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL-TDE---ERLREAVERI 383 (389)
T ss_pred ECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc-CCH---HHHHHHHHHH
Confidence 44 44444 67777899999552 1 67774 332 5666666554
No 215
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=95.26 E-value=1.6 Score=46.62 Aligned_cols=83 Identities=22% Similarity=0.367 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC--CCCceE--Ee--cCCCHHHHHHHHHhCCeEEeCC------------
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMF--CY--TGLNATQVEKLIKEHSVYLTKD------------ 395 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~--~q~GmF--~~--~~l~~~~v~~Ll~e~~Vy~~p~------------ 395 (420)
.+..++++.+.-+.|.+.|++.| +..+. .+..+. .+ .+++..+++..+++.||.+-++
T Consensus 312 ~~~~~~~~~~na~~L~~~L~~~G----~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~ 387 (475)
T PLN03226 312 FKAYQKQVKANAAALANRLMSKG----YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPG 387 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC----CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCC
Confidence 34556777888888888888877 34332 122333 23 3567788888889999998542
Q ss_pred -CcE-----EEcccCCCCHHHHHHHHHHHhC
Q psy16707 396 -GRI-----SMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 396 -gRi-----s~agl~~~ni~~la~AI~~vv~ 420 (420)
.|+ --.|+++++++++++.|+++++
T Consensus 388 giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 388 GVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 255 3356677889999999998863
No 216
>PRK09148 aminotransferase; Validated
Probab=95.14 E-value=0.21 Score=51.55 Aligned_cols=109 Identities=16% Similarity=0.209 Sum_probs=68.2
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
+.++.+....-.+++.-...++..+|+++ .+.++.++++++..|..|.+.|++.+ |..+.-+-|||.+..
T Consensus 258 ~~l~~~~~~~~~~~~~~~q~~~~~~L~~~------~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~ 327 (405)
T PRK09148 258 AALTRVKSYLDYGAFTPIQVAATAALNGP------QDCIAEMRELYKKRRDVLVESFGRAG----WDIPPPAASMFAWAP 327 (405)
T ss_pred HHHHHHHHHhccCCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHcC----CccCCCCeeEEEEEE
Confidence 34444433222233444556677788764 23456677888899999999998753 555567899999987
Q ss_pred CCH-------HHH-HHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LNA-------TQV-EKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~-------~qv-~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.+ ++. +.|.++.+|.+.+. | ||+++ . +-+.+.+++..+
T Consensus 328 l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~---~~~~l~~al~~l 384 (405)
T PRK09148 328 IPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-E---NEQRIRQAARNI 384 (405)
T ss_pred CCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-C---CHHHHHHHHHHH
Confidence 642 333 55667889988763 2 55553 2 345555555444
No 217
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=95.09 E-value=0.25 Score=50.89 Aligned_cols=116 Identities=12% Similarity=0.122 Sum_probs=69.5
Q ss_pred HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV-KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el-~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
+..+......+++..+..++...|.+.++.+.+.+++ +..++|...+++.|.+.|. ...|..+.-+-|+|-+.-+
T Consensus 270 ~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~----~~~~~~~~p~gg~fiw~~~ 345 (416)
T PRK09440 270 LSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLP----DEPCLIHKPEGAIFLWLWF 345 (416)
T ss_pred HHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCCeEEecCCCceEEEEEC
Confidence 3333333334678888999999999987666555543 2344454445544444332 1224444567789988743
Q ss_pred -----CHHHHHHHHHhcceEEcCC-----C------------ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 -----NATQVEKLIKEHSVYLTKD-----G------------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 -----~~~qv~~L~~~~~IY~~~~-----G------------Rinvagl~~~ni~~va~ai~~v 127 (420)
+.+++...-++++|-+.+. | ||++++ +.++++...+.|.++
T Consensus 346 ~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~~ 408 (416)
T PRK09440 346 KDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAEE 408 (416)
T ss_pred CCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHHHHHHHHHHH
Confidence 4455554446789987641 1 778776 666766666666554
No 218
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=95.06 E-value=0.18 Score=52.10 Aligned_cols=81 Identities=15% Similarity=0.126 Sum_probs=55.0
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----------
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------- 86 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---------- 86 (420)
+++.-...++...|.+. .+.| ++.++++++..|..|.+.|++.. .+..+..+.|||.+..+.
T Consensus 286 ~~~~~~q~a~~~~l~~~--~~~~---~~~~~~~~~~~r~~l~~~L~~~~---~~~~~~p~gg~f~~~~l~~~~~~~~~~~ 357 (412)
T PTZ00433 286 GPCSVVQAALGEALLNT--PQEH---LEQIVAKLEEGAMVLYNHIGECI---GLSPTMPRGSMFLMSRLDLEKFRDIKSD 357 (412)
T ss_pred CCChHHHHHHHHHHhcC--cHHH---HHHHHHHHHHHHHHHHHHHhcCC---CCcccCCCeeEEEEEEechhhcCCCCCH
Confidence 44445555555666542 2445 55567778888999999997642 255667788999987553
Q ss_pred HHHHHHHHHhcceEEcCCC
Q psy16707 87 ATQVEKLIKEHSVYLTKDG 105 (420)
Q Consensus 87 ~~qv~~L~~~~~IY~~~~G 105 (420)
.+-++.|.++++|++.+..
T Consensus 358 ~~~~~~ll~~~gV~v~pg~ 376 (412)
T PTZ00433 358 VEFYEKLLEEENVQVLPGE 376 (412)
T ss_pred HHHHHHHHHhcCEEEeCcc
Confidence 3567788888999987643
No 219
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=94.88 E-value=0.051 Score=55.60 Aligned_cols=45 Identities=20% Similarity=0.249 Sum_probs=38.3
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.|||.|+.+++..+ .+.| ||+|++|+|+|+.+...+..+|++
T Consensus 50 v~~~sgt~al~~~l~~~-~~~~-Gd~Viv~~~t~~~~~~~~~~~G~~ 94 (375)
T PRK11706 50 LLTPSCTAALEMAALLL-DIQP-GDEVIMPSYTFVSTANAFVLRGAK 94 (375)
T ss_pred EEECCHHHHHHHHHHHh-CCCC-CCEEEECCCCcHHHHHHHHHcCCE
Confidence 66999999998876543 2457 999999999999999999999886
No 220
>PLN02231 alanine transaminase
Probab=94.83 E-value=0.35 Score=52.40 Aligned_cols=87 Identities=13% Similarity=0.251 Sum_probs=66.3
Q ss_pred cCCCccchHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee--cCCCH
Q psy16707 14 FYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGLNA 87 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~----~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~--~gL~~ 87 (420)
...+++.-+-.++..++++| .-..+|.+|++.+++.+++.|..+++.|++. +| |....-|-|||.+ +.|.+
T Consensus 383 ~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~--~g-i~~~~p~Ggfylw~~l~lp~ 459 (534)
T PLN02231 383 VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL--EG-VTCNKAEGAMYLFPRIHLPQ 459 (534)
T ss_pred hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceecCCCeeeEEeccccCcH
Confidence 34467777888888899875 3567889999999999999999999999875 22 6666789999999 55443
Q ss_pred H---------------HHHHHHHhcceEEcC
Q psy16707 88 T---------------QVEKLIKEHSVYLTK 103 (420)
Q Consensus 88 ~---------------qv~~L~~~~~IY~~~ 103 (420)
. -+.+|.++++|.+++
T Consensus 460 ~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvP 490 (534)
T PLN02231 460 KAIKAAEAAKTAPDAFYCKRLLNATGIVVVP 490 (534)
T ss_pred HHHHHHhhcCCCcHHHHHHHHHHhcCEEEeC
Confidence 2 135577888998764
No 221
>PLN00144 acetylornithine transaminase
Probab=94.57 E-value=0.18 Score=52.01 Aligned_cols=104 Identities=11% Similarity=0.237 Sum_probs=61.8
Q ss_pred hccCCCchHHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--H
Q psy16707 304 AFYSSPPIHGARIVQ---EILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--A 378 (420)
Q Consensus 304 ~~~s~pp~~ga~iv~---~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~ 378 (420)
++|+.+|.. +.++. .++.+ .++.+.++.+.+.+ ++.+.+.+++.+. ...+ ...|+|.|+-++ .
T Consensus 264 ~T~~~~pl~-~aaa~a~l~~i~~----~~~~~~~~~~g~~l---~~~l~~~~~~~~~---~~~v-rg~G~~~~l~l~~~~ 331 (382)
T PLN00144 264 STFAGGPLV-CNAALAVLDKISK----PGFLASVAKKGEYL---RELLRRKLGGNPH---VKEV-RGVGLLVGIQLDVPA 331 (382)
T ss_pred CCCCCCHHH-HHHHHHHHHHHhh----chHHHHHHHHHHHH---HHHHHHHHhhCCC---ceee-ecCceEEEEEecCcc
Confidence 455554544 44444 23433 23445555555555 3344444444321 1122 248999987553 3
Q ss_pred HHHHHHHHhCCeEEeCCC-----cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 379 TQVEKLIKEHSVYLTKDG-----RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 379 ~~v~~Ll~e~~Vy~~p~g-----Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
+.+...+.+.||.+.|++ ||+.+. +++++++...+++.+++
T Consensus 332 ~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l 378 (382)
T PLN00144 332 GPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCL 378 (382)
T ss_pred HHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 334333468999998864 799998 78999999999998876
No 222
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=94.51 E-value=1.6 Score=46.86 Aligned_cols=81 Identities=17% Similarity=0.286 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccC--CCCceEEe-cCCC---HHHHHHHHHhCCeEEeC-------CC-----
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCY-TGLN---ATQVEKLIKEHSVYLTK-------DG----- 396 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~--~q~GmF~~-~~l~---~~~v~~Ll~e~~Vy~~p-------~g----- 396 (420)
+..++++.+.-..|.+.|++.|. ..+. .....+.. ++-. ...+.+.+++.||++.+ .|
T Consensus 338 ~~y~~~l~~Na~~La~~L~~~G~----~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~s 413 (493)
T PRK13580 338 QKYAQQVVDNARALAEGFLKRGA----RLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTS 413 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC----CccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCc
Confidence 34557777777788888888884 3221 23344432 3322 24566677899999963 12
Q ss_pred --cEEEcccC-----CCCHHHHHHHHHHHh
Q psy16707 397 --RISMAGVT-----SKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 --Ris~agl~-----~~ni~~la~AI~~vv 419 (420)
||++..++ ++.+++++++|.+++
T Consensus 414 rLRIg~~A~ttrg~teedi~~iad~l~~~l 443 (493)
T PRK13580 414 GIRLGTPALTTLGMGSDEMDEVAELIVKVL 443 (493)
T ss_pred eEEeccchhhhcCCCHHHHHHHHHHHHHHH
Confidence 88877544 688999999998875
No 223
>PRK07324 transaminase; Validated
Probab=94.48 E-value=0.34 Score=49.47 Aligned_cols=97 Identities=15% Similarity=0.116 Sum_probs=63.3
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----HHHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQV 90 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-----~~qv 90 (420)
.+++..+..++...|++ +.+-++.|++.++..|..|.+.|++.+ .+..+.-+-|||.|.-++ .+-+
T Consensus 253 ~~~~~~~q~~a~~~l~~------~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~~~~p~gg~~~~i~~~~~~~~~~~~ 323 (373)
T PRK07324 253 ICAGVFDDMLASLALEH------RDAILERNRKIVRTNLAILDEWVAKEP---RVSYVKPKAVSTSFVKLDVDMPSEDFC 323 (373)
T ss_pred ecCChHHHHHHHHHHcC------HHHHHHHHHHHHHHHHHHHHHHHhcCC---CceEECCCceEEEEEEeCCCCCHHHHH
Confidence 45556666677777764 345567778888888888888887642 244455677887776543 3445
Q ss_pred HHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHH
Q psy16707 91 EKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIH 125 (420)
Q Consensus 91 ~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~ 125 (420)
++|.++++|.+.+.. ||+++. + -+.+.+++.
T Consensus 324 ~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~---~~~l~~~l~ 362 (373)
T PRK07324 324 LKLLKETGVLLVPGNRFDLEGHVRIGYCC-D---TETLKKGLK 362 (373)
T ss_pred HHHHHhcCEEEECccccCCCCeEEEEecC-C---HHHHHHHHH
Confidence 777788999988754 667654 2 344444443
No 224
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=94.45 E-value=0.26 Score=50.72 Aligned_cols=80 Identities=21% Similarity=0.305 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--H-HHHHHHHHhCCeEEeCCC----cEEEc-ccCCCCH
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--A-TQVEKLIKEHSVYLTKDG----RISMA-GVTSKNV 408 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~-~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni 408 (420)
+.++.+++++.|.+.|++++.+. +. ..+..|.|.++.++ . +++++| .++||++.+.+ ||+.. ..+.+.+
T Consensus 308 l~~~~~~~~~~l~~~L~~l~~~~-i~-~~~~~g~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~iRi~p~l~~t~e~i 384 (396)
T PRK04073 308 LPERSLELGEYFKEQLKEIDNPM-IK-EVRGRGLFIGVELNEPARPYCEAL-KEEGLLCKETHETVIRFAPPLVITKEEL 384 (396)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCc-cc-ceecceEEEEEEecchHHHHHHHH-HHCCeEEecCCCCEEEEECCcccCHHHH
Confidence 34677788999999998875321 22 22345777765442 3 455666 56899998743 77742 3789999
Q ss_pred HHHHHHHHHHh
Q psy16707 409 GYLAKAIHAVT 419 (420)
Q Consensus 409 ~~la~AI~~vv 419 (420)
+++.+++++++
T Consensus 385 ~~~~~~l~~~l 395 (396)
T PRK04073 385 DWAFEKIKAVL 395 (396)
T ss_pred HHHHHHHHHHh
Confidence 99999999876
No 225
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=94.44 E-value=0.4 Score=48.51 Aligned_cols=104 Identities=18% Similarity=0.233 Sum_probs=64.8
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.+..+.+....+|+..+..++...|.+. .| ++.++.+++..|..+.+.|++.+ ++...-+-|+|.+.-+
T Consensus 238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~---~~~~~~~~~~~~~~~~~~L~~~g----~~~~~p~~~~~~~~~~ 306 (357)
T TIGR03539 238 ELLTVRKHAGLMVPAPVQAAMVAALGDD----GH---VAEQKARYAARRAQLKPALEKAG----FRIDHSEAGLYLWATR 306 (357)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHcCCH----HH---HHHHHHHHHHHHHHHHHHHHHcC----CCCcCCCccEEEEEEC
Confidence 3444444444456666667777888762 22 45567777788888888888753 3445567899988865
Q ss_pred --CHHHHHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHH
Q psy16707 86 --NATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAI 124 (420)
Q Consensus 86 --~~~qv~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai 124 (420)
+..++..+-++++|.+.+.. ||+++. ++ +.+.++|
T Consensus 307 ~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~---~~i~~~~ 353 (357)
T TIGR03539 307 GEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-TD---ERIAAAV 353 (357)
T ss_pred CCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-CH---HHHHHHH
Confidence 44455444478899887632 677665 33 4444444
No 226
>PRK09028 cystathionine beta-lyase; Provisional
Probab=94.32 E-value=0.12 Score=53.77 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=47.5
Q ss_pred CCCCCCCC--CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707 196 DKEYAPII--GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP 273 (420)
Q Consensus 196 ~~~Y~p~~--G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p 273 (420)
.+.|+... +...|+++++++.-+.+ + +.+.||++|+..++..+ +.|
T Consensus 52 ~~~Y~r~~npt~~~Le~~iA~le~~~~--------~----------------------~~~~sG~~Ai~~~l~al--l~~ 99 (394)
T PRK09028 52 EMFYGRRGTPTHFAFQAAIVELEGGAG--------T----------------------ALYPSGAAAISNALLSF--LKA 99 (394)
T ss_pred CceecCCCCchHHHHHHHHHHHhCCCc--------E----------------------EEECCHHHHHHHHHHHH--hCC
Confidence 36688643 34699999999863322 2 57999999999877533 557
Q ss_pred CCCEEEEcCCCCCCcHHHH
Q psy16707 274 GEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 274 ~gd~VlvpdP~w~ny~~i~ 292 (420)
||.|++++|.|+.+..++
T Consensus 100 -GD~Vvv~~~~Y~~t~~l~ 117 (394)
T PRK09028 100 -GDHLLMVDSCYEPTRDLC 117 (394)
T ss_pred -CCEEEEECCCcHHHHHHH
Confidence 999999999997777544
No 227
>PRK08175 aminotransferase; Validated
Probab=94.28 E-value=0.45 Score=48.84 Aligned_cols=73 Identities=18% Similarity=0.287 Sum_probs=50.8
Q ss_pred HHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-------HHH-HHH
Q psy16707 22 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-------TQV-EKL 93 (420)
Q Consensus 22 Ga~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-------~qv-~~L 93 (420)
...++...|.++ .+.++.++++++..|..+.+.|++.+ |.....+.|||-+.-|.+ +.+ +.|
T Consensus 274 ~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l 343 (395)
T PRK08175 274 LQVAAIAALEGD------QQCVRDIAEQYKRRRDVLVKGLHEAG----WMVEMPKASMYVWAKIPEPYAAMGSLEFAKKL 343 (395)
T ss_pred HHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHcC----CcccCCCEEEEEEEECCcccCCCCHHHHHHHH
Confidence 344445555542 34577788899999999999998762 544556689999987653 344 456
Q ss_pred HHhcceEEcCC
Q psy16707 94 IKEHSVYLTKD 104 (420)
Q Consensus 94 ~~~~~IY~~~~ 104 (420)
.++++|++.+.
T Consensus 344 ~~~~gv~v~p~ 354 (395)
T PRK08175 344 LNEAKVCVSPG 354 (395)
T ss_pred HHhCCEEEeCc
Confidence 67899998764
No 228
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=94.25 E-value=0.41 Score=48.99 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-------CCceEEec-CCCHHHH-HHHHHhCCeEEeCC--------C
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-------QIGMFCYT-GLNATQV-EKLIKEHSVYLTKD--------G 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-------q~GmF~~~-~l~~~~v-~~Ll~e~~Vy~~p~--------g 396 (420)
++.+.+|.++..+.+++.|++.+. +..+.. ..+.|++. |.+.+++ +.| +++||.+.++ -
T Consensus 259 ~e~~~~r~~~l~~~l~~~l~~~~~---~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L-~~~gI~i~~~~~~l~~~~v 334 (361)
T TIGR01366 259 LDWAVARTADSSSRLYSWAQERPY---ATPFVTDPGKRSQVVGTIDFVDDIDAATVAKIL-RANGIVDTEPYRKLGRNQL 334 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC---cccCCCChhhcccceEEEECCCccCHHHHHHHH-HHCCCeeccCccccCCCcE
Confidence 566678899999999999998874 222211 11556664 4566666 555 7789999875 2
Q ss_pred cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 397 RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 Ris~agl-~~~ni~~la~AI~~vv 419 (420)
|||+.+- +.++|+.+.++|++++
T Consensus 335 Ris~~~~~t~~di~~l~~al~~~~ 358 (361)
T TIGR01366 335 RVAMFPAIDPDDVEALTECVDWVV 358 (361)
T ss_pred EEEcCCCCCHHHHHHHHHHHHHHH
Confidence 9999884 6788999999999875
No 229
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=94.13 E-value=0.54 Score=47.85 Aligned_cols=96 Identities=16% Similarity=0.169 Sum_probs=61.1
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHH-HHH
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQ-VEK 92 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~q-v~~ 92 (420)
++..-...+...|.+ +...++.++++++..|+.|.+.|++.+ +.....+-|+|-+.-+ +.++ ++.
T Consensus 272 ~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~v~~~~~~~~~~l~~~ 341 (385)
T PRK09276 272 VFQAIQEAGIAALNG------PQEVVEELRKIYQERRDILVEGLRKLG----LEVEPPKATFYVWAPVPKGYTSAEFATL 341 (385)
T ss_pred CCHHHHHHHHHHHcC------cHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEECCCCCCHHHHHHH
Confidence 333334455666654 234456678888999999999998753 4444456677766654 3444 577
Q ss_pred HHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 93 LIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 93 L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
|.++++|++.+. | ||+++ .++ +.+.++|...
T Consensus 342 ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~---~~l~~~l~~l 382 (385)
T PRK09276 342 LLDKAGVVVTPGNGFGEYGEGYFRIALT-VPD---ERIEEAVERI 382 (385)
T ss_pred HHHhCCEEECCchhhCCCCCCeEEEEeC-CCH---HHHHHHHHHH
Confidence 878899998763 2 67764 333 4666666544
No 230
>PRK07050 cystathionine beta-lyase; Provisional
Probab=94.05 E-value=0.13 Score=53.30 Aligned_cols=44 Identities=14% Similarity=0.190 Sum_probs=34.7
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~ 298 (420)
+.+.||+.|+.+++..+ +.| ||.|++++|+|+.+... ++..|++
T Consensus 84 l~~~sgt~Ai~~~l~al--~~~-GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~ 131 (394)
T PRK07050 84 LLQPSGLAAISLVYFGL--VKA-GDDVLIPDNAYGPNRDHGEWLARDFGIT 131 (394)
T ss_pred EEeccHHHHHHHHHHHH--hCC-CCEEEEecCCcccHHHHHHHHHHhcCeE
Confidence 67999999999988655 457 99999999999987743 3445654
No 231
>PRK09082 methionine aminotransferase; Validated
Probab=93.98 E-value=0.5 Score=48.34 Aligned_cols=88 Identities=10% Similarity=0.067 Sum_probs=58.3
Q ss_pred HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---
Q psy16707 7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--- 83 (420)
Q Consensus 7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--- 83 (420)
++.+.+..-.++|.....+++.+|.+ ..+| ++.+++.++..|..+.+.|++.+ |.....+.|||.+.
T Consensus 258 ~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~---~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~g~~~~~~~~~ 327 (386)
T PRK09082 258 FRKVHQYNTFTVNTPAQLALADYLRA---EPEH---YLELPAFYQAKRDRFRAALANSR----FKLLPCEGTYFQLVDYS 327 (386)
T ss_pred HHHHHhhhcCCCChHHHHHHHHHHhC---ChHH---HHHHHHHHHHHHHHHHHHHHhCC----CcccCCCeeEEEEEecc
Confidence 34444433345677777778888863 1233 44567788888999999998743 55566688998875
Q ss_pred ---CCCHHHH-HHHHHhcceEEcCC
Q psy16707 84 ---GLNATQV-EKLIKEHSVYLTKD 104 (420)
Q Consensus 84 ---gL~~~qv-~~L~~~~~IY~~~~ 104 (420)
+.+.+++ +.|.++++|.+.+.
T Consensus 328 ~~~~~~~~~~~~~l~~~~~v~v~pg 352 (386)
T PRK09082 328 AISDLDDVEFCQWLTREHGVAAIPL 352 (386)
T ss_pred ccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 4456666 45678999987553
No 232
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=93.95 E-value=0.21 Score=51.39 Aligned_cols=45 Identities=20% Similarity=0.249 Sum_probs=38.4
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.|.|||.|+.+++..+ .+.| ||+|++|+|+|+.+...+...|++
T Consensus 50 v~~~sgt~aL~~~l~al-~~~p-Gd~Viv~~~t~~~~~~~~~~~G~~ 94 (376)
T TIGR02379 50 LLTPSCTAALEMAALLL-DIQP-GDEVIMPSYTFVSTANAFVLRGAK 94 (376)
T ss_pred EEeCCHHHHHHHHHHHc-CCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence 66999999999887644 2557 999999999999999888888876
No 233
>PRK06855 aminotransferase; Validated
Probab=93.92 E-value=0.55 Score=49.12 Aligned_cols=103 Identities=8% Similarity=0.071 Sum_probs=69.3
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHH-------
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNAT------- 88 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~------- 88 (420)
.+++...-.++...|.+++. .+-++++++.++..|..+.+.|++. ++ |....-+-|||.++-|.+.
T Consensus 281 ~~~~~~~Q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~L~~~--~~-~~~~~p~gg~~~w~~l~~~~~~~~~~ 353 (433)
T PRK06855 281 VCSTTLPQMAIPRIMSHPEY----KNYLKERNKRYEKRSNIAYEKLKDV--PG-LKVNRTNGAFYMTVVFEDGVLNNKQS 353 (433)
T ss_pred cCCChHHHHHHHHhhcCCcH----HHHHHHHHHHHHHHHHHHHHHHhcC--CC-eeccCCCeeEEEeecccccccccccc
Confidence 45666777888888887543 3455666778888899999999764 33 6656678889999877642
Q ss_pred -------------------------HHHHHHHhcceEEcCC---------CceecccCCcCCHHHHHHHHH
Q psy16707 89 -------------------------QVEKLIKEHSVYLTKD---------GRISMAGVTSKNVGYLAKAIH 125 (420)
Q Consensus 89 -------------------------qv~~L~~~~~IY~~~~---------GRinvagl~~~ni~~va~ai~ 125 (420)
-+..|-++++|.+++. =||++++.+...++.-++.|.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~ 424 (433)
T PRK06855 354 LPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLA 424 (433)
T ss_pred CCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHH
Confidence 2345667889987644 267777766555544444443
No 234
>PRK08636 aspartate aminotransferase; Provisional
Probab=93.80 E-value=0.65 Score=47.81 Aligned_cols=76 Identities=17% Similarity=0.347 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-------HHH-HHHHHhcceEEcCCC---------
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-------TQV-EKLIKEHSVYLTKDG--------- 105 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-------~qv-~~L~~~~~IY~~~~G--------- 105 (420)
++.+++.++..|..|.+.|++.+ |.+..-+.|||.++.|++ +++ +.|.++++|.+.+..
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~ 375 (403)
T PRK08636 300 VEEIRETYRKRRDVLIESFANAG----WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEY 375 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC----CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCe
Confidence 55567788888999999998752 666667899999998862 444 456778999986641
Q ss_pred -ceecccCCcCCHHHHHHHHHh
Q psy16707 106 -RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 106 -Rinvagl~~~ni~~va~ai~~ 126 (420)
||+++ .+. +.+.++++.
T Consensus 376 iRi~~~-~~~---~~l~~~~~r 393 (403)
T PRK08636 376 VRIALI-ENE---NRIRQAARN 393 (403)
T ss_pred EEEEec-CCH---HHHHHHHHH
Confidence 67775 443 444444443
No 235
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=93.74 E-value=0.17 Score=43.89 Aligned_cols=44 Identities=23% Similarity=0.184 Sum_probs=36.1
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH-HHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI-PICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~-~i~~~aG~~ 298 (420)
+.+.|||.|+.+++..+. .+ +++|++++|+|+.+. ..++..|++
T Consensus 21 ~~~~~~t~a~~~~~~~~~--~~-~~~v~~~~~~~~~~~~~~~~~~g~~ 65 (170)
T cd01494 21 VFVPSGTGANEAALLALL--GP-GDEVIVDANGHGSRYWVAAELAGAK 65 (170)
T ss_pred EEeCCcHHHHHHHHHHhC--CC-CCEEEEeecccceehhhHHHhcCCE
Confidence 457799999999987663 35 899999999999998 777777755
No 236
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=93.70 E-value=0.52 Score=48.02 Aligned_cols=98 Identities=11% Similarity=0.170 Sum_probs=67.1
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLI 94 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~qv~~L~ 94 (420)
+++.....++..+|.++ +|. +.++++++..|..+.+.|++.+ |. .....|+|-+.-++ .+..+.|.
T Consensus 253 ~~s~~~q~~~~~~l~~~----~~~---~~~~~~~~~~r~~~~~~L~~~g----~~-~~p~~~~f~~~~~~~~~~~a~~l~ 320 (369)
T PRK08153 253 GMNRIAQAAALAALKDQ----AYL---AEVVGKIAAARDRIAAIARANG----LT-PLPSATNFVAIDCGRDGAFARAVL 320 (369)
T ss_pred CCCHHHHHHHHHHhcCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----Cc-cCCCcCcEEEEECCCCcccHHHHH
Confidence 45566778888888753 564 4567788888999999898654 33 23567888887653 12222333
Q ss_pred H---hcceEEc-C---C--C--ceecccCCcCCHHHHHHHHHhhC
Q psy16707 95 K---EHSVYLT-K---D--G--RISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 95 ~---~~~IY~~-~---~--G--Rinvagl~~~ni~~va~ai~~v~ 128 (420)
+ +++|++. + . + ||+++ ++..++++.+++.++.
T Consensus 321 ~~l~~~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~ 363 (369)
T PRK08153 321 DGLIARDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEAL 363 (369)
T ss_pred HHHHHCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHH
Confidence 3 5799983 2 1 2 67777 7899999999998873
No 237
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=93.61 E-value=0.29 Score=50.03 Aligned_cols=79 Identities=15% Similarity=0.221 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC-------HHHHHHHHHhCCeEEeCCC----cEEEc-ccCC
Q psy16707 339 DRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN-------ATQVEKLIKEHSVYLTKDG----RISMA-GVTS 405 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~-------~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~ 405 (420)
++.+++++.+.+.|+++ +.. .|.....+.|+|+++.++ .++++.|+ ++||++.|++ ||+.. ..++
T Consensus 302 ~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~lRi~~~~~~~~ 379 (400)
T PTZ00125 302 ENAQRLGEVFRDGLKELLKKS-PWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLK-ENGLLAKPTHDNIIRFAPPLVITK 379 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCeEEEecccEEEEEEEccCcchHHHHHHHHHH-HCCeEEeecCCCEEEEECCccCCH
Confidence 44445555555556553 211 132223457888765332 24456665 7899999864 88863 3788
Q ss_pred CCHHHHHHHHHHHh
Q psy16707 406 KNVGYLAKAIHAVT 419 (420)
Q Consensus 406 ~ni~~la~AI~~vv 419 (420)
++|+.+.++|.+++
T Consensus 380 ~~i~~~l~~l~~~l 393 (400)
T PTZ00125 380 EQLDQALEIIKKVL 393 (400)
T ss_pred HHHHHHHHHHHHHH
Confidence 89999999988765
No 238
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=93.49 E-value=0.78 Score=45.90 Aligned_cols=95 Identities=17% Similarity=0.292 Sum_probs=63.6
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHH-HHHH
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQ-VEKL 93 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~q-v~~L 93 (420)
++..+-.++...|.++ +| ++.+++++...|..|.+.|++.+ |. +....|+|.+..+ +.++ ++.|
T Consensus 244 ~~~~~q~~~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~l 311 (353)
T PRK05387 244 LDRLAQAGAIAAIEDE----AY---FEETRAKVIATRERLVEELEALG----FE-VLPSKANFVFARHPSHDAAELAAKL 311 (353)
T ss_pred cCHHHHHHHHHHhcCH----HH---HHHHHHHHHHHHHHHHHHHHHCC----Ce-ECCCcCcEEEEECCCCCHHHHHHHH
Confidence 4455666777777653 34 34578888999999999998763 43 2345677877765 3444 4455
Q ss_pred HHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.+++|++..- + ||+++ ++..++++.++|.++
T Consensus 312 -~~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~ 350 (353)
T PRK05387 312 -RERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEI 350 (353)
T ss_pred -HHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHH
Confidence 5678988211 1 67776 567888888888765
No 239
>PRK07777 aminotransferase; Validated
Probab=93.44 E-value=0.78 Score=46.80 Aligned_cols=71 Identities=15% Similarity=0.222 Sum_probs=48.5
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------C-HHHHHHHHH
Q psy16707 23 ARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N-ATQVEKLIK 95 (420)
Q Consensus 23 a~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~-~~qv~~L~~ 95 (420)
..++...|.++ ++|. +.+++.++..|..|.+.|++.+ |..+..+-|||.++-+ + .+-++.|.+
T Consensus 270 q~~~~~~l~~~---~~~~---~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 339 (387)
T PRK07777 270 QPAVAHALDHE---DAWV---AALRDSLQAKRDRLAAGLAEAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPE 339 (387)
T ss_pred HHHHHHHHhCC---cHHH---HHHHHHHHHHHHHHHHHHHhCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHH
Confidence 44555666543 3564 4567788889999999998753 5555667788887543 3 344677778
Q ss_pred hcceEEcC
Q psy16707 96 EHSVYLTK 103 (420)
Q Consensus 96 ~~~IY~~~ 103 (420)
+++|++.+
T Consensus 340 ~~gv~v~p 347 (387)
T PRK07777 340 RVGVAAIP 347 (387)
T ss_pred hCCEEEeC
Confidence 89998854
No 240
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=93.34 E-value=0.3 Score=51.46 Aligned_cols=83 Identities=20% Similarity=0.384 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC----CCCceEEe--cCCCHHHHHHHHHhCCeEEeC------------
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIGMFCY--TGLNATQVEKLIKEHSVYLTK------------ 394 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~----~q~GmF~~--~~l~~~~v~~Ll~e~~Vy~~p------------ 394 (420)
+.+.+++++.+.++.|.+.|++.|. ..+. .+.+...+ .+.+.+.+..+++++||++..
T Consensus 300 ~~~~~~~~i~~l~~~l~~~L~~~g~----~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~ 375 (452)
T PTZ00094 300 EWKEYAKQVLKNAKALAAALEKRGY----DLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNP 375 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCc----EEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCC
Confidence 4556778899999999999988763 2221 12233222 245667777777899999952
Q ss_pred -CCcEEEcccC-----CCCHHHHHHHHHHHh
Q psy16707 395 -DGRISMAGVT-----SKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 -~gRis~agl~-----~~ni~~la~AI~~vv 419 (420)
+.|++...+| ++.+++++++|.+++
T Consensus 376 ~~vRis~~~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 376 SGVRLGTPALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred CeEEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 2399986665 699999999999876
No 241
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=93.23 E-value=0.74 Score=49.32 Aligned_cols=96 Identities=14% Similarity=0.274 Sum_probs=68.5
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-----
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWL-TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA----- 87 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~-~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~----- 87 (420)
.+++.+.....+++.+|+|++ |. +-+..++++++.-|+.+.+.|++.+ +..+.-+-|+|.+.-|.+
T Consensus 307 ~~~~vs~~~Q~a~~~~L~d~~----~~~~~l~~~r~~l~~r~~~l~~~L~~~g----i~~~~~~aG~flwi~l~~~~~~~ 378 (496)
T PLN02376 307 SFGLVSSQTQLMLASMLSDDQ----FVDNFLMESSRRLGIRHKVFTTGIKKAD----IACLTSNAGLFAWMDLRHLLRDR 378 (496)
T ss_pred hcCCCCHHHHHHHHHHhCChh----HHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCceEEEEEEchhhhccC
Confidence 455677778889999999864 53 3477888999999999999998753 556667889999998753
Q ss_pred -------HHHHHHHHhcceEEcCC--------C--ceecccCCcCCH
Q psy16707 88 -------TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNV 117 (420)
Q Consensus 88 -------~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni 117 (420)
+-++.|.++++|.+.+. | |||++......+
T Consensus 379 ~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l 425 (496)
T PLN02376 379 NSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTL 425 (496)
T ss_pred CchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHH
Confidence 12334566788988753 2 667666554333
No 242
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=92.94 E-value=0.91 Score=46.31 Aligned_cols=59 Identities=15% Similarity=0.281 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------HHHHHHHHHhcceEEcC
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------ATQVEKLIKEHSVYLTK 103 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------~~qv~~L~~~~~IY~~~ 103 (420)
+.++.++++++..|..+.+.|++.+ |.+...+-|||-+.-++ .+.++.|.++++|++.+
T Consensus 289 ~~l~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~p 354 (388)
T PRK07366 289 ATVQQTVQIFRQRRDAFINALHQIG----WPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASP 354 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeC
Confidence 4467788888999999999998762 66667789999888664 23456787889998875
No 243
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=92.86 E-value=0.9 Score=45.71 Aligned_cols=98 Identities=14% Similarity=0.106 Sum_probs=68.0
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVEKLIK 95 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv~~L~~ 95 (420)
+.+..+..++..+|++. +.++.++++++..|..+.+.|++. ++ |. +....|+|.+..+ +.+++..+-+
T Consensus 247 ~~~~~~q~~a~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~l~ 315 (356)
T PRK04870 247 NVNVLTQATALFALEHV-------DVLDAQAAQLRAERTRLAAALAAL--PG-VT-VFPSAANFILVRVPDAAAVFDGLK 315 (356)
T ss_pred cCCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHHHhC--CC-cE-ECCCCCeEEEEECCCHHHHHHHHH
Confidence 45556666677777652 235667788889999999999865 23 43 3456788887777 4566666667
Q ss_pred hcceEEcCC----------CceecccCCcCCHHHHHHHHHhh
Q psy16707 96 EHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 96 ~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~v 127 (420)
+++|.+.+. =||+++ +...++.+.+||.++
T Consensus 316 ~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~ 355 (356)
T PRK04870 316 TRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAA 355 (356)
T ss_pred HCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHh
Confidence 889998532 146666 568889999998765
No 244
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=92.82 E-value=0.57 Score=48.02 Aligned_cols=82 Identities=17% Similarity=0.160 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec--CC--C-HHHHHHHHHhCCeEEeCCC----cEEEc-ccCCC
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GL--N-ATQVEKLIKEHSVYLTKDG----RISMA-GVTSK 406 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~--~l--~-~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ 406 (420)
+.++++++++.+.+.|++++.+. .......+.||.+. +- + .++++.|+ +.||++.+.+ ||+.. ..+++
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~~~~-~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~-~~GV~v~~~~~~~lR~~p~~~~t~e 386 (401)
T PRK00854 309 MIENAAEMGAYFLEGLRSIRSNI-VREVRGRGLMLAVELEPEAGGARQYCEALK-ERGLLAKDTHDHTIRLAPPLVITRE 386 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhccCc-eEEEeccceEEEEEEecCchhHHHHHHHHH-HCCeEEecCCCCEEEEeCCcccCHH
Confidence 56788889999999998876321 11122233344431 21 2 34567775 5799998643 78863 57899
Q ss_pred CHHHHHHHHHHHhC
Q psy16707 407 NVGYLAKAIHAVTK 420 (420)
Q Consensus 407 ni~~la~AI~~vv~ 420 (420)
+|+++.++++++++
T Consensus 387 ~i~~~i~~l~~~l~ 400 (401)
T PRK00854 387 QVDWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998763
No 245
>PRK08912 hypothetical protein; Provisional
Probab=92.74 E-value=1.1 Score=45.78 Aligned_cols=79 Identities=19% Similarity=0.318 Sum_probs=54.7
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------- 86 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~------- 86 (420)
.|+.||...+.+++.+.++ .+|. +.++++++..|+.+++.|+..+ |....-+.|+|.+.-++
T Consensus 262 ~~~~~~~~q~~~~~~l~~~----~~~~---~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~g~~~l~~~l~~~~~~~~ 330 (387)
T PRK08912 262 TFTTPPNLQAAVAYGLGKP----DDYF---EGMRADLARSRDRLAAGLRRIG----FPVLPSQGTYFLTVDLAPLGLAED 330 (387)
T ss_pred cccCChHHHHHHHHHHhCC----HHHH---HHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEecccccCCCCC
Confidence 3777777767666666554 3343 4578888999999999998763 45555678888887654
Q ss_pred HHH-HHHHHHhcceEEcC
Q psy16707 87 ATQ-VEKLIKEHSVYLTK 103 (420)
Q Consensus 87 ~~q-v~~L~~~~~IY~~~ 103 (420)
.++ ++.|.++++|++.+
T Consensus 331 ~~~~~~~l~~~~gV~v~p 348 (387)
T PRK08912 331 DVAFCRRLVEEAGVAAIP 348 (387)
T ss_pred HHHHHHHHHhcCCEEEec
Confidence 333 45566788998875
No 246
>PRK05942 aspartate aminotransferase; Provisional
Probab=92.74 E-value=1.3 Score=45.44 Aligned_cols=108 Identities=18% Similarity=0.202 Sum_probs=68.3
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++.+.+..-.+++.....++..+|.+ +.+-++.++++++..|..+.+.|++.+ |..+..+.|||.+.-+
T Consensus 264 ~l~~~~~~~~~~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~~~~ 333 (394)
T PRK05942 264 GLRTLKTNLDYGIFSALQKAAETALQL------PDSYLQQVQERYRTRRDFLIQGLGELG----WNIPPTKATMYLWVPC 333 (394)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHhC------cHHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeeEEEEEC
Confidence 344433332234455556677777753 233345677888888999999997653 4555667899887654
Q ss_pred ----CHHH-HHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 ----NATQ-VEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ----~~~q-v~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.++ ++.+-++++|.+.+. + ||+++ ...+.+.+++...
T Consensus 334 ~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~----~~~~~l~~~l~~l 386 (394)
T PRK05942 334 PVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI----ADCDRLGEALDRL 386 (394)
T ss_pred CCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec----CCHHHHHHHHHHH
Confidence 3444 345667899998541 1 67764 3467888887765
No 247
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=92.68 E-value=0.96 Score=45.81 Aligned_cols=101 Identities=12% Similarity=0.151 Sum_probs=62.7
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHH
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVE 91 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv~ 91 (420)
..|+. +..+..++...|.+. +.|. +.++++...|..+.+.|++.+ +.....+-|+|.+.-+ +.+++.
T Consensus 255 ~~~~~-s~~~~~a~~~~l~~~---~~~~----~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~ 322 (368)
T PRK03317 255 LPYHL-SAVTQAAARAALRHA---DELL----ASVAALRAERDRVVAWLRELG----LRVAPSDANFVLFGRFADRHAVW 322 (368)
T ss_pred CCCCC-CHHHHHHHHHHhhCH---HHHH----HHHHHHHHHHHHHHHHHHHCC----CEeCCCCCcEEEEeccCCHHHHH
Confidence 34543 344566666777652 2333 334556777888888887753 4444556666666443 333333
Q ss_pred HHHHhcceEEcCCC-----ceecccCCcCCHHHHHHHHHhh
Q psy16707 92 KLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 92 ~L~~~~~IY~~~~G-----Rinvagl~~~ni~~va~ai~~v 127 (420)
..-.+++|++...| ||+++ ++..++.+.+++.++
T Consensus 323 ~~l~~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~ 361 (368)
T PRK03317 323 QGLLDRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEV 361 (368)
T ss_pred HHHHHCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHH
Confidence 33346799998654 66665 567889999999887
No 248
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=92.67 E-value=0.82 Score=46.70 Aligned_cols=83 Identities=17% Similarity=0.328 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecC-----CCHHHHHHHHHhcceEEcC------------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTG-----LNATQVEKLIKEHSVYLTK------------ 103 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~g-----L~~~qv~~L~~~~~IY~~~------------ 103 (420)
+.++.+++++..|..|.+.|.+.+ |..+. .+.++|.+.- .+.+++..+-++++|++..
T Consensus 276 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~ 351 (402)
T cd00378 276 EFKAYAKQVVENAKALAEALKERG----FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFV 351 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC----CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCC
Confidence 556677888999999999998764 43332 2346665443 3456676766888999942
Q ss_pred -CC-ceeccc-----CCcCCHHHHHHHHHhhC
Q psy16707 104 -DG-RISMAG-----VTSKNVGYLAKAIHANG 128 (420)
Q Consensus 104 -~G-Rinvag-----l~~~ni~~va~ai~~v~ 128 (420)
++ ||++.+ ++.++|++++++|.++.
T Consensus 352 ~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 352 PSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred CCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 11 776655 45899999999999873
No 249
>PRK06348 aspartate aminotransferase; Provisional
Probab=92.66 E-value=1.1 Score=45.71 Aligned_cols=89 Identities=16% Similarity=0.197 Sum_probs=56.0
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-- 83 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-- 83 (420)
.++.+.+....++|..+..++...|.+. +.|. +.+++.++..|..+++.|+.. ++ +....-+.|||.++
T Consensus 255 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~---~~~~~~~~~r~~~~~~~L~~~--~~-~~~~~p~gg~~~~~~~ 325 (384)
T PRK06348 255 TAKIINEGICFSAPTISQRAAIYALKHR---DTIV---PLIKEEFQKRLEYAYKRIESI--PN-LSLHPPKGSIYAFINI 325 (384)
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHhCc---HHHH---HHHHHHHHHHHHHHHHHHhcC--CC-ceeccCCeeEEEEEec
Confidence 4455555544455666677777777642 3444 445566666677788888754 22 44445678999874
Q ss_pred ---CCCHHHH-HHHHHhcceEEcC
Q psy16707 84 ---GLNATQV-EKLIKEHSVYLTK 103 (420)
Q Consensus 84 ---gL~~~qv-~~L~~~~~IY~~~ 103 (420)
+++.++. +.|.++++|.+.+
T Consensus 326 ~~~~~~~~~l~~~l~~~~gv~v~p 349 (384)
T PRK06348 326 KKTGLSSVEFCEKLLKEAHVLVIP 349 (384)
T ss_pred ccCCCCHHHHHHHHHHhCCEEEcC
Confidence 4556664 4567789998874
No 250
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=92.34 E-value=0.31 Score=48.43 Aligned_cols=65 Identities=23% Similarity=0.179 Sum_probs=50.4
Q ss_pred CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEc
Q psy16707 202 IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVP 281 (420)
Q Consensus 202 ~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvp 281 (420)
-....+|++++++++ |.. .+ +.+.|||.|+..++..+. +.| ||+|++|
T Consensus 17 ~~~~~~~~~~la~~~-~~~-------~~----------------------~~~~sgt~al~~~l~~l~-~~~-gd~vl~~ 64 (352)
T cd00616 17 GPKVREFEKAFAEYL-GVK-------YA----------------------VAVSSGTAALHLALRALG-IGP-GDEVIVP 64 (352)
T ss_pred CHHHHHHHHHHHHHh-CCC-------eE----------------------EEECCHHHHHHHHHHHcC-CCC-CCEEEeC
Confidence 446889999999976 421 12 557899999998886542 457 8999999
Q ss_pred CCCCCCcHHHHhhcCcc
Q psy16707 282 TPTWGNHIPICKHTGLE 298 (420)
Q Consensus 282 dP~w~ny~~i~~~aG~~ 298 (420)
+|+|..+...+...|++
T Consensus 65 ~~~~~~~~~~~~~~g~~ 81 (352)
T cd00616 65 SFTFVATANAILLLGAT 81 (352)
T ss_pred CcchHHHHHHHHHcCCe
Confidence 99999998888887775
No 251
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=92.34 E-value=0.45 Score=49.57 Aligned_cols=55 Identities=15% Similarity=0.148 Sum_probs=38.5
Q ss_pred CCCceEEecCC--------CHHHHHHHH---HhCCeEEeCCC------cEEEcc-cCCCCHHHHHHHHHHHhC
Q psy16707 366 DQIGMFCYTGL--------NATQVEKLI---KEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 366 ~q~GmF~~~~l--------~~~~v~~Ll---~e~~Vy~~p~g------Ris~ag-l~~~ni~~la~AI~~vv~ 420 (420)
...|+|+++-+ +.++...+. .+.||.+.|++ ||+.+. +++++|+...+++.++++
T Consensus 347 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 347 RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 34588887533 123333343 68999999863 788764 688999999999988763
No 252
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=92.32 E-value=0.68 Score=48.40 Aligned_cols=85 Identities=12% Similarity=0.113 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec--CC------CHHHHHHH---HHhCCeEEeCCC------c
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GL------NATQVEKL---IKEHSVYLTKDG------R 397 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~--~l------~~~~v~~L---l~e~~Vy~~p~g------R 397 (420)
+.+.++++++++.|.+.|+++....++-......|+|+.+ .. +.+++..+ +.+.||++.|++ |
T Consensus 317 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr 396 (421)
T PRK06777 317 EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIR 396 (421)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEE
Confidence 3566788888888888888764221232223455555532 11 12333333 457999999864 7
Q ss_pred EEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 398 ISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~a-gl~~~ni~~la~AI~~vv 419 (420)
|... .+++++++...+++.+++
T Consensus 397 ~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 397 FLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHH
Confidence 7764 378999999999998875
No 253
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=92.25 E-value=1.3 Score=45.43 Aligned_cols=98 Identities=13% Similarity=0.217 Sum_probs=60.7
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC------HHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------ATQ 89 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~------~~q 89 (420)
.+++.-.-.++..+|.+.. .|. ..++.+++..|..+.+.|++.+ +.....+.|+|.+..+. ..+
T Consensus 268 ~~~~~~~q~~~~~~l~~~~---~~~---~~~~~~~~~~~~~~~~~l~~~~----~~~~~p~gg~~~~~~l~~~~~~~~~~ 337 (391)
T PRK07309 268 TAATTMAQFAAVEALTNGK---DDA---LPMKKEYIKRRDYIIEKMTDLG----FKIIKPDGAFYIFAKIPAGYNQDSFK 337 (391)
T ss_pred cCCChHHHHHHHHHHhCCh---hHH---HHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEECCCCCCCCHHH
Confidence 3455555666777787642 232 4567777888888999998753 55566677888775443 333
Q ss_pred -HHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHH
Q psy16707 90 -VEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAI 124 (420)
Q Consensus 90 -v~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai 124 (420)
+++|.++++|.+.+.. ||+++. +...++...+.|
T Consensus 338 ~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l 382 (391)
T PRK07309 338 FLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRL 382 (391)
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHH
Confidence 4466678899886432 677664 333444444443
No 254
>PRK09265 aminotransferase AlaT; Validated
Probab=92.13 E-value=1.5 Score=45.15 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=64.4
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------- 86 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~------- 86 (420)
...+++..+-.++..+|.+.+-..+|.++ +.++...|..+.+.|+++ ++ |..+.-+-|||.+.-+.
T Consensus 274 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~----~~~~~~~r~~~~~~L~~~--~~-~~~~~p~~g~~l~~~~~~~~~~~~ 346 (404)
T PRK09265 274 MRLCANVPAQHAIQTALGGYQSINELILP----GGRLYEQRDRAWELLNAI--PG-VSCVKPKGALYAFPKLDPKVYPIH 346 (404)
T ss_pred cccCCCcHHHHHHHHHhcCchhHHHHHHH----HHHHHHHHHHHHHHHhcC--CC-CcccCCCcceEEEEEecccccCCC
Confidence 34466777788888888764322223222 345666688888888764 23 66667788999996553
Q ss_pred --HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHH
Q psy16707 87 --ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIH 125 (420)
Q Consensus 87 --~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~ 125 (420)
.+.+..+-++++|.+.+. + ||++ +.+...++...+.|.
T Consensus 347 ~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~-~~~~e~l~~~l~rl~ 396 (404)
T PRK09265 347 DDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT-LPRVDDLEEAIGRIG 396 (404)
T ss_pred CHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe-CCCHHHHHHHHHHHH
Confidence 345667778899988542 1 5777 344444444444443
No 255
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=92.13 E-value=1.5 Score=44.91 Aligned_cols=75 Identities=12% Similarity=0.095 Sum_probs=48.5
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKL 93 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L 93 (420)
++|......+...|.++ +.++..++++++.|..+.+.|++. +....-+.|+|.+.-+. .+-++.|
T Consensus 276 ~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~gg~f~~~~~~~~~~~~~~~l 343 (393)
T TIGR03538 276 AMPIPTQLASIAAWNDE-------QHVRENRALYREKFAAVLEILGQV-----LDLELPDAGFYLWPKVPGDDEAFARAL 343 (393)
T ss_pred CcCHHHHHHHHHHhcCh-------HHHHHHHHHHHHHHHHHHHHHHhh-----CcccCCCeeEEEEEECCCCHHHHHHHH
Confidence 34444455555556542 235666777777888888888753 12245688999999875 3344467
Q ss_pred HHhcceEEcC
Q psy16707 94 IKEHSVYLTK 103 (420)
Q Consensus 94 ~~~~~IY~~~ 103 (420)
.++++|.+.+
T Consensus 344 ~~~~gV~v~p 353 (393)
T TIGR03538 344 YEEENVTVLP 353 (393)
T ss_pred HHHCCEEEeC
Confidence 7789998853
No 256
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=92.10 E-value=1.4 Score=45.00 Aligned_cols=82 Identities=13% Similarity=0.217 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-----ccccceeec--CCCHHHHHHHHHhcceEEcC------------
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-----DQIGMFCYT--GLNATQVEKLIKEHSVYLTK------------ 103 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-----~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~------------ 103 (420)
++.+++|+..+++.|.+.|++.. .|..+. .+.|++++. +.+.+++..+-++++|++..
T Consensus 293 ~~~~~~~~~~l~~~l~~~l~~~~---g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~ 369 (403)
T TIGR01979 293 LENIEAHEHELTAYALERLGEIP---GLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRF 369 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC---CEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHh
Confidence 67889999999999999997642 133332 236776654 66666666555788998853
Q ss_pred ----CCceecccC-CcCCHHHHHHHHHhh
Q psy16707 104 ----DGRISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 104 ----~GRinvagl-~~~ni~~va~ai~~v 127 (420)
.=||++.-. +.++|++++++|.++
T Consensus 370 ~~~~~iRiS~~~~~t~~di~~l~~~l~~~ 398 (403)
T TIGR01979 370 GVPATCRASFYIYNTEEDIDALVEALKKV 398 (403)
T ss_pred CCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence 236666544 457999999998765
No 257
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=92.08 E-value=1.4 Score=44.73 Aligned_cols=71 Identities=17% Similarity=0.260 Sum_probs=49.3
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHH-HHHHHHhc
Q psy16707 23 ARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQ-VEKLIKEH 97 (420)
Q Consensus 23 a~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~q-v~~L~~~~ 97 (420)
..++...|.+. ..|. +.++++++..|..+.+.|++.+ |..+..+.|+|.+.-+ +.++ ++.|.+++
T Consensus 275 q~~~~~~l~~~---~~~~---~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~ 344 (383)
T TIGR03540 275 QYAAIAALNGP---QDVV---KEIRKIYQRRRDLLLEALKKIG----IDVEKPKATFYVWVPVPEGYTSAEFAARLLEET 344 (383)
T ss_pred HHHHHHHHhCC---HHHH---HHHHHHHHHHHHHHHHHHHhCC----CEecCCCcceEEEEECCCCCCHHHHHHHHHHHC
Confidence 44556667664 4565 4557888899999999998763 5555567788877654 3344 56677788
Q ss_pred ceEEcC
Q psy16707 98 SVYLTK 103 (420)
Q Consensus 98 ~IY~~~ 103 (420)
+|.+.+
T Consensus 345 gi~v~~ 350 (383)
T TIGR03540 345 GVVVTP 350 (383)
T ss_pred CEEEec
Confidence 998874
No 258
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=92.04 E-value=30 Score=40.59 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-CCCCceEEec-CCCHHHH-HHHHHhCCeEEeCC--C--cEEEcccC-C
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYT-GLNATQV-EKLIKEHSVYLTKD--G--RISMAGVT-S 405 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i-~~q~GmF~~~-~l~~~~v-~~Ll~e~~Vy~~p~--g--Ris~agl~-~ 405 (420)
++.+++|+......+.+.|++.|. +.. .+..+.|.+- + +++++ ++| .+.||.+... + |+|+.-.| .
T Consensus 380 l~~Ia~ri~~la~~l~~~L~~~G~----~~~~~~~f~~vt~~~~-~~~~v~~~L-~~~gI~l~~~~~~~lrvs~~e~~T~ 453 (993)
T PLN02414 380 LKTIAQRVHGLAGVFAAGLKKLGF----QVQSLPFFDTVKVKCS-DADAIADAA-AKVGINLRVVDANTVTVSFDETTTL 453 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCC----ccCCCCCcCeEEEecC-CHHHHHHHH-HHCCCeeEEecCCeEEEEeeccCCH
Confidence 566678888888888999988773 322 2334566553 3 34555 555 7889888532 2 77777664 4
Q ss_pred CCHHHHHHHHH
Q psy16707 406 KNVGYLAKAIH 416 (420)
Q Consensus 406 ~ni~~la~AI~ 416 (420)
++|+.|++++.
T Consensus 454 edId~L~~~l~ 464 (993)
T PLN02414 454 EDVDKLFKVFA 464 (993)
T ss_pred HHHHHHHHHHc
Confidence 56999999885
No 259
>PRK06290 aspartate aminotransferase; Provisional
Probab=92.01 E-value=1.1 Score=46.59 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=69.4
Q ss_pred HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC
Q psy16707 7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN 86 (420)
Q Consensus 7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~ 86 (420)
+..+.....++++.-...++..+|.++ +| ++.++++++..|..+++.|++.+ |....-+.|||.+..+.
T Consensus 273 l~~~~~~~~~~~~~~~q~aa~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~g~f~l~v~lp 341 (410)
T PRK06290 273 FATVKDNNDSGQFIAIQKAGIYALDHP----EI---TEKIREKYSRRLDKLVKILNEVG----FKAEMPGGTFYLYVKAP 341 (410)
T ss_pred HHHHHhccccCCcHHHHHHHHHHhhCc----HH---HHHHHHHHHHHHHHHHHHHHhCC----CeecCCCeeeEEEEECC
Confidence 333333333444444456778888875 35 34567777788889999998763 55555688999886654
Q ss_pred -----------H-HHHHHHHHhcceEEcC-C-----CceecccC--CcCCHHHHHHHHHhh
Q psy16707 87 -----------A-TQVEKLIKEHSVYLTK-D-----GRISMAGV--TSKNVGYLAKAIHAN 127 (420)
Q Consensus 87 -----------~-~qv~~L~~~~~IY~~~-~-----GRinvagl--~~~ni~~va~ai~~v 127 (420)
. +=+++|.++..|-..+ + =||++++. +....+.+.+|+.++
T Consensus 342 ~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~ 402 (410)
T PRK06290 342 KGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRR 402 (410)
T ss_pred CccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHH
Confidence 2 3346777776655433 1 26777764 346677888877665
No 260
>PRK06207 aspartate aminotransferase; Provisional
Probab=91.97 E-value=1.4 Score=45.48 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=57.4
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++.+......+++.....++..+|.++ ..|.++ ..++.++.|..+.+.|++. + .+.....+-|||.+.-+
T Consensus 272 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~---~~~~~~~~r~~l~~~L~~~--~-~~~~~~p~gg~fl~~~l 342 (405)
T PRK06207 272 RMEKLQAIVSLRAAGYSQAVLRTWFSEP---DGWMKD---RIARHQAIRDDLLRVLRGV--E-GVFVRAPQAGSYLFPRL 342 (405)
T ss_pred HHHHHHhHhccCCCHHHHHHHHHHHhCc---HHHHHH---HHHHHHHHHHHHHHHHhcC--C-CceecCCCeeEEEEEeC
Confidence 3444433334455556777888888753 234333 4455667788899888764 2 25656677899999887
Q ss_pred CH------HHHHHHHHhcceEEcC
Q psy16707 86 NA------TQVEKLIKEHSVYLTK 103 (420)
Q Consensus 86 ~~------~qv~~L~~~~~IY~~~ 103 (420)
++ +=++.|.++++|.+.+
T Consensus 343 ~~~~~~~~~~~~~l~~~~gV~v~p 366 (405)
T PRK06207 343 PRLAVSLHDFVKILRLQAGVIVTP 366 (405)
T ss_pred cccCCCHHHHHHHHHHhcCEEEeC
Confidence 53 2355677788998875
No 261
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=91.96 E-value=1.6 Score=45.10 Aligned_cols=83 Identities=12% Similarity=0.184 Sum_probs=56.0
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A 87 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~ 87 (420)
+..+.+++.....++..+|.+.. ..| ++.+++.++.-|..+.+.|++.+ |....-+.|||-+.-+. .
T Consensus 288 ~~~~~~~s~~~q~a~~~~l~~~~--~~~---~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~g~~f~wi~~~~~~~~ 358 (409)
T PRK07590 288 STKFNGVSYIVQRAAEAVYSPEG--KAQ---IKELIDYYMENAKIIREGLESAG----FEVYGGVNAPYIWVKTPDGMSS 358 (409)
T ss_pred hhcccCcCHHHHHHHHHHhcCCc--HHH---HHHHHHHHHHHHHHHHHHHHhcC----CceecCCcceEEEEECCCCCCH
Confidence 33455566677777778887542 234 55567788888999999998753 44333467888877653 3
Q ss_pred HH-HHHHHHhcceEEcC
Q psy16707 88 TQ-VEKLIKEHSVYLTK 103 (420)
Q Consensus 88 ~q-v~~L~~~~~IY~~~ 103 (420)
++ ++.|.++++|.+.+
T Consensus 359 ~~~~~~l~~~~gv~v~p 375 (409)
T PRK07590 359 WDFFDKLLQEANVVGTP 375 (409)
T ss_pred HHHHHHHHHHCCEEEeC
Confidence 43 55677888998864
No 262
>PRK06107 aspartate aminotransferase; Provisional
Probab=91.94 E-value=1.7 Score=44.72 Aligned_cols=90 Identities=13% Similarity=0.077 Sum_probs=61.4
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++.+......+|+.....++..+|.+. ..| ++.++++++..|..+++.|++. ++ +..+.-+.|||.++-+
T Consensus 262 ~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~---~~~~~~~~~~~~~~~~~~L~~~--~g-~~~~~p~gg~~~~~~~ 332 (402)
T PRK06107 262 AINKLQSQSSSCPSSISQAAAAAALNGD---QSF---VTESVAVYKQRRDYALALLNAI--PG-LSCLVPDGAFYLYVNC 332 (402)
T ss_pred HHHHHHHhcccCCChHHHHHHHHHhcCC---hHH---HHHHHHHHHHHHHHHHHHHhcC--CC-CcccCCCcceEEeeec
Confidence 3444444344567777888889899753 346 4566677888899999999764 22 5666678999988754
Q ss_pred ---------------CHHH-HHHHHHhcceEEcCC
Q psy16707 86 ---------------NATQ-VEKLIKEHSVYLTKD 104 (420)
Q Consensus 86 ---------------~~~q-v~~L~~~~~IY~~~~ 104 (420)
+.+. ++.|-++++|-+.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg 367 (402)
T PRK06107 333 AGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQG 367 (402)
T ss_pred ccccccccccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 2233 567878889977654
No 263
>PRK05939 hypothetical protein; Provisional
Probab=91.84 E-value=0.61 Score=48.52 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=48.5
Q ss_pred CCCCCCCCCH---HHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707 197 KEYAPIIGAP---DFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP 273 (420)
Q Consensus 197 ~~Y~p~~G~~---~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p 273 (420)
+.|. -.|.| .|.++++++.-+.+ . +.+.+|+.|+..++..+ +.|
T Consensus 39 ~~Y~-r~g~p~~~~lE~~la~leg~~~----------~--------------------v~~ssG~~Ai~~~l~al--l~~ 85 (397)
T PRK05939 39 FTYA-RQGTPTTAALEAKITKMEGGVG----------T--------------------VCFATGMAAIAAVFLTL--LRA 85 (397)
T ss_pred CCcC-CCCCHHHHHHHHHHHHHhCCCe----------E--------------------EEeCCHHHHHHHHHHHH--cCC
Confidence 4454 34888 88888888764432 1 56788899998877544 457
Q ss_pred CCCEEEEcCCCCCCcHHH---HhhcCcc
Q psy16707 274 GEKVIYVPTPTWGNHIPI---CKHTGLE 298 (420)
Q Consensus 274 ~gd~VlvpdP~w~ny~~i---~~~aG~~ 298 (420)
||.|+++++.|+++... ++..|++
T Consensus 86 -Gd~Vv~~~~~y~~t~~~~~~l~~~G~~ 112 (397)
T PRK05939 86 -GDHLVSSQFLFGNTNSLFGTLRGLGVE 112 (397)
T ss_pred -CCEEEECCCccccHHHHHHHHHhcCCE
Confidence 99999999999987654 3445654
No 264
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=91.82 E-value=1.2 Score=44.95 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=65.3
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHH
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVE 91 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv~ 91 (420)
..|+.+.. ...++...|.++.+ +.++..+++++..|+.|.+.|++.+. +... .-.|.|-+..+ +.+++.
T Consensus 241 ~~~~~~~~-~~~~a~~~l~~~~~-----~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~-~~~g~f~~~~~~~~~~~~ 310 (354)
T PRK04635 241 APYPVPLP-VSEIATQALSEAGL-----ARMKFQVLDLNAQGARLQAALSMYGG---AKVL-EGNGNYVLAKFDDVDAVF 310 (354)
T ss_pred CCCCCCHH-HHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHHhCCC---ceEC-CCCCcEEEEECCCHHHHH
Confidence 34544322 23445566655431 23566677788889999999987531 3322 33478887666 566666
Q ss_pred HHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 92 KLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 92 ~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.+-++++|.+..- | ||+++ +..+++.+++++.+-
T Consensus 311 ~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~~ 352 (354)
T PRK04635 311 KALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 6557889988421 2 77765 568899999988653
No 265
>PRK06836 aspartate aminotransferase; Provisional
Probab=91.79 E-value=1.4 Score=45.17 Aligned_cols=87 Identities=18% Similarity=0.284 Sum_probs=58.5
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHH
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVE 91 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~qv~ 91 (420)
+.++|.....+++.++.++.. +.+++..|+.+.+.|++.| |..+..+-|||.+.-+ +..++.
T Consensus 281 ~~~~~~~~q~~~~~~l~~~~~-----------~~~~~~~r~~l~~~L~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~ 345 (394)
T PRK06836 281 FVNAPALMQRVVAKCLDATVD-----------VSIYKRNRDLLYDGLTELG----FECVKPQGAFYLFPKSPEEDDVAFC 345 (394)
T ss_pred cccCCHHHHHHHHHHhCChHH-----------HHHHHHHHHHHHHHHHhCC----CEeecCCceEEEEEeCCCCCHHHHH
Confidence 346677788899999988532 2445666888888887653 6656667789988755 556665
Q ss_pred HHHHhcceEEcCCC--------ceecccCCcCCH
Q psy16707 92 KLIKEHSVYLTKDG--------RISMAGVTSKNV 117 (420)
Q Consensus 92 ~L~~~~~IY~~~~G--------Rinvagl~~~ni 117 (420)
.+-++++|.+.+.+ ||+++ .++..+
T Consensus 346 ~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~ 378 (394)
T PRK06836 346 EKAKKHNLLLVPGSGFGCPGYFRLSYC-VDTETI 378 (394)
T ss_pred HHHHhCCEEEECchhcCCCCeEEEEec-CCHHHH
Confidence 55578899887652 56665 444443
No 266
>PRK07683 aminotransferase A; Validated
Probab=91.69 E-value=1.6 Score=44.67 Aligned_cols=87 Identities=11% Similarity=0.063 Sum_probs=57.4
Q ss_pred HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-
Q psy16707 7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL- 85 (420)
Q Consensus 7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL- 85 (420)
+.......+.+++.....++..+|.+.. .| ++.++++++..|..+.+.|.+.+ +.....+-|+|.+.-+
T Consensus 255 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~---~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~ 324 (387)
T PRK07683 255 ILKVHQYNVTCASSISQYAALEALTAGK---DD---AKMMRHQYKKRRDYVYNRLISMG----LDVEKPTGAFYLFPSIG 324 (387)
T ss_pred HHHHHHhccCCCChHHHHHHHHHHhCCh---HH---HHHHHHHHHHHHHHHHHHHHHcC----CcccCCCeeEEEEEecc
Confidence 3333333444556667777888887643 23 56667888888999999997752 4444567888888643
Q ss_pred ----CHHHH-HHHHHhcceEEcC
Q psy16707 86 ----NATQV-EKLIKEHSVYLTK 103 (420)
Q Consensus 86 ----~~~qv-~~L~~~~~IY~~~ 103 (420)
+.++. .+|-++++|++.+
T Consensus 325 ~~~~~~~~~~~~ll~~~gI~v~p 347 (387)
T PRK07683 325 HFTMSSFDFALDLVEEAGLAVVP 347 (387)
T ss_pred cCCCCHHHHHHHHHHhCCEEEcC
Confidence 44443 4666788999865
No 267
>PRK08363 alanine aminotransferase; Validated
Probab=91.49 E-value=1.4 Score=45.11 Aligned_cols=77 Identities=12% Similarity=0.188 Sum_probs=49.5
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CHHHH
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQV 90 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------~~~qv 90 (420)
++.....++...|.+. .+| ++.++++++..|..+.+.|++. ++ |.....+-|+|.+.-+ +.+.+
T Consensus 275 ~s~~~q~~~~~~l~~~---~~~---l~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~g~~~~~~~l~~~~~~~~~~~~ 345 (398)
T PRK08363 275 PNTPAQFAAIAGLTGP---MDY---LEEYMKKLKERRDYIYKRLNEI--PG-ISTTKPQGAFYIFPRIEEGPWKDDKEFV 345 (398)
T ss_pred CChHHHHHHHHHHhCC---hHH---HHHHHHHHHHHHHHHHHHHhcC--CC-CEecCCCeEEEEEEEeccCCCCCHHHHH
Confidence 3444555666667542 344 4455777888888899998764 33 6655567788887433 34556
Q ss_pred HHHHHhcceEEcC
Q psy16707 91 EKLIKEHSVYLTK 103 (420)
Q Consensus 91 ~~L~~~~~IY~~~ 103 (420)
..+-++++|.+.+
T Consensus 346 ~~~l~~~gV~v~~ 358 (398)
T PRK08363 346 LDVLHEAHVLFVH 358 (398)
T ss_pred HHHHHhCCEEEeC
Confidence 6666788998854
No 268
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=91.40 E-value=0.49 Score=48.89 Aligned_cols=59 Identities=20% Similarity=0.158 Sum_probs=44.4
Q ss_pred CCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707 197 KEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG 274 (420)
Q Consensus 197 ~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~ 274 (420)
+.|. |..+..+|+++++++.-++.. +.+.+|+.|+.+++..+ +.|
T Consensus 53 ~~Y~r~~~p~~~~Le~~lA~~~g~~~~------------------------------i~~~sG~~Ai~~~l~al--l~~- 99 (388)
T PRK07811 53 YEYARTGNPTRTALEEQLAALEGGAYG------------------------------RAFSSGMAATDCLLRAV--LRP- 99 (388)
T ss_pred CcccCCCCccHHHHHHHHHHHhCCCce------------------------------EEeCCHHHHHHHHHHHH--hCC-
Confidence 3455 557789999999997633321 45678899999988655 457
Q ss_pred CCEEEEcCCCCCCc
Q psy16707 275 EKVIYVPTPTWGNH 288 (420)
Q Consensus 275 gd~VlvpdP~w~ny 288 (420)
||.|++++|+|+..
T Consensus 100 Gd~Vl~~~~~y~~t 113 (388)
T PRK07811 100 GDHIVIPNDAYGGT 113 (388)
T ss_pred CCEEEEcCCCchHH
Confidence 99999999999953
No 269
>PRK05367 glycine dehydrogenase; Provisional
Probab=91.39 E-value=32 Score=40.25 Aligned_cols=81 Identities=19% Similarity=0.216 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEe-cCCCHHHHHHHHHhCCeEEeCC--C--cEEEccc-C
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCY-TGLNATQVEKLIKEHSVYLTKD--G--RISMAGV-T 404 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~-~~l~~~~v~~Ll~e~~Vy~~p~--g--Ris~agl-~ 404 (420)
.-++.+++|+......+.+.|++.|.+ .... .-+.|.+ ++.+.+++.+-+.+.||.+..- + |||+.-. +
T Consensus 350 ~Gl~~Ia~~~~~la~~l~~~L~~~G~~----~~~~~~f~~~~~~~~~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t 425 (954)
T PRK05367 350 EGLKAIARRVHRLAAILAAGLRALGLE----VVHDSFFDTLTVEVGGDAAAVLARALAAGINLRRVDDDHVGISLDETTT 425 (954)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCcc----cCCCCCCCeEEEeCCCCHHHHHHHHHHCCceeccccCCEEEEEecccCC
Confidence 347777788888888889999887743 2211 1233333 2335566644447889988432 2 7777655 4
Q ss_pred CCCHHHHHHHHH
Q psy16707 405 SKNVGYLAKAIH 416 (420)
Q Consensus 405 ~~ni~~la~AI~ 416 (420)
.++|+.+++++.
T Consensus 426 ~~did~l~~~l~ 437 (954)
T PRK05367 426 REDLAALLAVFG 437 (954)
T ss_pred HHHHHHHHHHHc
Confidence 456999999885
No 270
>PRK08960 hypothetical protein; Provisional
Probab=91.38 E-value=2.1 Score=43.69 Aligned_cols=109 Identities=15% Similarity=0.197 Sum_probs=68.1
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-ccccccceeecC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTG 84 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~-i~~Q~GmFs~~g 84 (420)
.++.+......+++.....++...|.+. |.+-++.++++++..|..|.+.|++.+ |.. ..-+-|||.+.-
T Consensus 255 ~~~~~~~~~~~~~s~~~q~a~~~~l~~~-----~~~~l~~~~~~~~~~~~~l~~~L~~~~----~~~~~~p~g~~f~~~~ 325 (387)
T PRK08960 255 ELEKLAQNLYISASTPAQHAALACFEPE-----TLAILEARRAEFARRRDFLLPALRELG----FGIAVEPQGAFYLYAD 325 (387)
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHhhcC-----cHHHHHHHHHHHHHHHHHHHHHHHhcC----CcCCcCCCeeEEEEEe
Confidence 3444434344455556666666777542 345566778888999999999998753 332 235678998764
Q ss_pred C-----CHHHH-HHHHHhcceEEcCC-----------CceecccCCcCCHHHHHHHHHhh
Q psy16707 85 L-----NATQV-EKLIKEHSVYLTKD-----------GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L-----~~~qv-~~L~~~~~IY~~~~-----------GRinvagl~~~ni~~va~ai~~v 127 (420)
+ +.+++ +.|.++++|++.+. =||+++. ..+.+.+|+..+
T Consensus 326 ~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~----~~~~l~~al~~l 381 (387)
T PRK08960 326 ISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ----SLPRLQEAVERI 381 (387)
T ss_pred ccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC----CHHHHHHHHHHH
Confidence 4 34444 46778899998742 1455553 356777776554
No 271
>PRK07503 methionine gamma-lyase; Provisional
Probab=91.19 E-value=0.68 Score=48.16 Aligned_cols=44 Identities=20% Similarity=0.270 Sum_probs=31.8
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~ 298 (420)
+.+.+|+.|+.+++..+ +.| ||+|++++|+|+..... ++..|++
T Consensus 84 i~~~sG~~Al~~~l~~l--l~~-Gd~Viv~~~~y~~t~~~~~~~~~~~G~~ 131 (403)
T PRK07503 84 VALASGMGAITATLWTL--LRP-GDEVIVDQTLYGCTFAFLHHGLGEFGVT 131 (403)
T ss_pred EEEcCHHHHHHHHHHHH--cCC-CCEEEEccCccchHHHHHHHHHhhCCEE
Confidence 55789999999887544 557 99999999999764433 3345654
No 272
>PLN00175 aminotransferase family protein; Provisional
Probab=91.18 E-value=1.8 Score=44.95 Aligned_cols=98 Identities=14% Similarity=0.187 Sum_probs=62.8
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------CH-HH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA-TQ 89 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~~-~q 89 (420)
++|.-.-.++...|.++ +.| ++.++++++..|..+++.|++.+ +....-+-|||.++-+ +. +=
T Consensus 291 ~~s~~~Q~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~ 360 (413)
T PLN00175 291 ATATPMQWAAVAALRAP---ESY---YEELKRDYSAKKDILVEGLKEVG----FKVYPSSGTYFVMVDHTPFGFENDIAF 360 (413)
T ss_pred CCCHHHHHHHHHHHhCC---HHH---HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEeccccCCCCHHHH
Confidence 44444566667778765 345 55667788888999999998763 3444567788888643 23 44
Q ss_pred HHHHHHhcceEEcCC---------C----ceecccCCcCCHHHHHHHHH
Q psy16707 90 VEKLIKEHSVYLTKD---------G----RISMAGVTSKNVGYLAKAIH 125 (420)
Q Consensus 90 v~~L~~~~~IY~~~~---------G----Rinvagl~~~ni~~va~ai~ 125 (420)
++.|.++++|.+.+. | ||+++. ++.+++...+.|.
T Consensus 361 ~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~ 408 (413)
T PLN00175 361 CEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMK 408 (413)
T ss_pred HHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHH
Confidence 567888899988642 1 677763 4445444444443
No 273
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=91.17 E-value=0.98 Score=44.76 Aligned_cols=81 Identities=17% Similarity=0.209 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccc-eeec---CCCHHHH-HHHHHhcceEEcCC---------C--c
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM-FCYT---GLNATQV-EKLIKEHSVYLTKD---------G--R 106 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~Gm-Fs~~---gL~~~qv-~~L~~~~~IY~~~~---------G--R 106 (420)
.+.++++++.+++.|.+.|.+.+. ..+....++ +++. +.+.+++ +.|.++ +|.+... + |
T Consensus 252 ~~~~~~~~~~~~~~l~~~l~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iR 326 (349)
T cd06454 252 GPERRERLQENVRYLRRGLKELGF----PVGGSPSHIIPPLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVPRGTARLR 326 (349)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCC----cccCCCCCcEEEEeCCChHHHHHHHHHHHhC-CceEEEecCCccCCCCCeEE
Confidence 567789999999999999987643 222222233 3332 2333444 566555 8887531 2 6
Q ss_pred eeccc-CCcCCHHHHHHHHHhhC
Q psy16707 107 ISMAG-VTSKNVGYLAKAIHANG 128 (420)
Q Consensus 107 invag-l~~~ni~~va~ai~~v~ 128 (420)
|+++. .+..+|++++++|.++|
T Consensus 327 i~~~~~~~~~~i~~~~~~l~~~~ 349 (349)
T cd06454 327 ISLSAAHTKEDIDRLLEALKEVG 349 (349)
T ss_pred EEEeCCCCHHHHHHHHHHHHHhC
Confidence 78776 78899999999999886
No 274
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=91.12 E-value=2 Score=43.19 Aligned_cols=106 Identities=13% Similarity=0.216 Sum_probs=64.0
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-----cccccceee--c
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-----TDQIGMFCY--T 83 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~-el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-----~~Q~GmFs~--~ 83 (420)
|-..++||..+..-+...| +.|.+ .++.+++|+..+.+.+.+.|++... |.-+ .++.++.++ .
T Consensus 242 r~~~~t~~~~~~~a~~~al------~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~---~~~~~~~~~~~~~~~v~~~~~ 312 (376)
T TIGR01977 242 RFESGTLNTPGIAGLNAGI------KFIEKIGIANIAKKECMLTEKLLNGLREINK---VKIYGPADPANRVGVVSFTVE 312 (376)
T ss_pred hccCCCCCHHHHHHHHHHH------HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCCCccccCCeEEEEEC
Confidence 3345666665533333222 23333 2578899999999999999975431 2211 123456544 4
Q ss_pred CCCHHHHH-HHHHhcceEEcCC----------------C--ceecccCC-cCCHHHHHHHHHh
Q psy16707 84 GLNATQVE-KLIKEHSVYLTKD----------------G--RISMAGVT-SKNVGYLAKAIHA 126 (420)
Q Consensus 84 gL~~~qv~-~L~~~~~IY~~~~----------------G--Rinvagl~-~~ni~~va~ai~~ 126 (420)
+.+.+++. .|.++|+|++... | ||++.+.| ..+|++++++|.+
T Consensus 313 ~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 313 GIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 67766665 5767778887542 2 55555544 4788888888865
No 275
>PRK05967 cystathionine beta-lyase; Provisional
Probab=91.12 E-value=0.59 Score=48.81 Aligned_cols=44 Identities=18% Similarity=0.223 Sum_probs=33.6
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
+.+.+|++|+..++..+ +.| ||.|++++|.|+++...+ +..|.+
T Consensus 83 v~~sSG~aAi~~~l~al--l~~-GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~ 130 (395)
T PRK05967 83 ILVPSGLAAVTVPFLGF--LSP-GDHALIVDSVYYPTRHFCDTMLKRLGVE 130 (395)
T ss_pred EEECcHHHHHHHHHHHh--cCC-CCEEEEccCCcHHHHHHHHHHHHhcCeE
Confidence 56778999999877533 557 999999999999987544 445554
No 276
>PRK08361 aspartate aminotransferase; Provisional
Probab=91.08 E-value=1.9 Score=44.05 Aligned_cols=81 Identities=12% Similarity=0.182 Sum_probs=56.4
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQV 90 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~qv 90 (420)
.++|.....++..+|.+++. | +-++.++++++..|..+.+.|++.. + +....-+-|||.+. +++.+++
T Consensus 268 ~~~~~~~q~~~~~~l~~~~~---~-~~~~~~~~~~~~~~~~~~~~L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~l 340 (391)
T PRK08361 268 GNVASFVQIAGIEALRSKES---W-KAVEEMRKEYNERRKLVLKRLKEMP--H-IKVFEPKGAFYVFANIDETGMSSEDF 340 (391)
T ss_pred cCCChHHHHHHHHHhcCCcc---c-HHHHHHHHHHHHHHHHHHHHHHhCC--C-CeecCCCEEEEEEEECCCCCCCHHHH
Confidence 45565666777778877543 2 3577888899999999999998752 2 45555677898875 3455555
Q ss_pred H-HHHHhcceEEcC
Q psy16707 91 E-KLIKEHSVYLTK 103 (420)
Q Consensus 91 ~-~L~~~~~IY~~~ 103 (420)
. .|.++++|.+.+
T Consensus 341 ~~~l~~~~gv~v~p 354 (391)
T PRK08361 341 AEWLLEKARVVVIP 354 (391)
T ss_pred HHHHHHhCCEEEcC
Confidence 4 566778998854
No 277
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=90.98 E-value=0.74 Score=47.52 Aligned_cols=82 Identities=13% Similarity=0.101 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCCC----cE--EEcc
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG----RI--SMAG 402 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~g----Ri--s~ag 402 (420)
.+.++++++++.|.+.|++++....+-......|.+..+-+ ..++++.| .++||++.+.| |+ +++
T Consensus 299 ~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~~lR~~p~~~- 376 (397)
T TIGR03246 299 ELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAA-AEEGVIALIAGPNVVRFAPSLV- 376 (397)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHH-HHCCeEEeecCCCEEEEeCCCC-
Confidence 45688888889999988887632221111234455553211 22444555 57899988643 67 444
Q ss_pred cCCCCHHHHHHHHHHHh
Q psy16707 403 VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 l~~~ni~~la~AI~~vv 419 (420)
.++++|+++.+++.+++
T Consensus 377 ~t~~~i~~~~~~l~~~l 393 (397)
T TIGR03246 377 ISDDDIDEGLARFERAI 393 (397)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 68889999999888775
No 278
>PRK05367 glycine dehydrogenase; Provisional
Probab=90.93 E-value=13 Score=43.46 Aligned_cols=81 Identities=17% Similarity=0.206 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee-cCCCHHHHHHHHHhcceEEcCC--C--ceecccCCc-C
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGLNATQVEKLIKEHSVYLTKD--G--RISMAGVTS-K 115 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~-~gL~~~qv~~L~~~~~IY~~~~--G--Rinvagl~~-~ 115 (420)
-|+.+++|+..+-..|.+.|++.|..-..... -+.|.+ ++-+.+++..--.+.+|.+... + ||++--.|+ .
T Consensus 351 Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~---f~~~~~~~~~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~ 427 (954)
T PRK05367 351 GLKAIARRVHRLAAILAAGLRALGLEVVHDSF---FDTLTVEVGGDAAAVLARALAAGINLRRVDDDHVGISLDETTTRE 427 (954)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCcccCCCCC---CCeEEEeCCCCHHHHHHHHHHCCceeccccCCEEEEEecccCCHH
Confidence 38889999999999999999765433211111 123332 2335666554336778887433 2 566666655 6
Q ss_pred CHHHHHHHHH
Q psy16707 116 NVGYLAKAIH 125 (420)
Q Consensus 116 ni~~va~ai~ 125 (420)
+||.+++++.
T Consensus 428 did~l~~~l~ 437 (954)
T PRK05367 428 DLAALLAVFG 437 (954)
T ss_pred HHHHHHHHHc
Confidence 7999999996
No 279
>PRK06767 methionine gamma-lyase; Provisional
Probab=90.82 E-value=0.7 Score=47.67 Aligned_cols=60 Identities=15% Similarity=0.047 Sum_probs=42.9
Q ss_pred CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707 201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV 280 (420)
Q Consensus 201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv 280 (420)
|..-..+|.+.++++.-+++ . +.+.+|+.|+..+...+ +.| ||.|++
T Consensus 59 ~~pt~~~Le~~lA~l~G~~~----------a--------------------l~~~sG~~Ai~~~l~al--~~~-Gd~Vv~ 105 (386)
T PRK06767 59 GNPTVKLFEERMAVLEGGEE----------A--------------------LAFGSGMAAISATLIGF--LKA-GDHIIC 105 (386)
T ss_pred CCcchHHHHHHHHHHhCCCc----------E--------------------EEECCHHHHHHHHHHHH--hCC-CCEEEE
Confidence 44446789999998763221 1 56788999888776433 457 999999
Q ss_pred cCCCCCCcHHHHh
Q psy16707 281 PTPTWGNHIPICK 293 (420)
Q Consensus 281 pdP~w~ny~~i~~ 293 (420)
++|.|+.....+.
T Consensus 106 ~~~~y~~~~~~~~ 118 (386)
T PRK06767 106 SNGLYGCTYGFLE 118 (386)
T ss_pred cCCcHHHHHHHHH
Confidence 9999987766554
No 280
>PRK07049 methionine gamma-lyase; Validated
Probab=90.81 E-value=0.68 Score=48.63 Aligned_cols=44 Identities=18% Similarity=0.264 Sum_probs=34.4
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
+.+.||+.|+..+...+ +.| ||.|++++|+|+.|...+ +..|++
T Consensus 102 iv~~sG~~Ai~~~l~al--~~~-Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~ 149 (427)
T PRK07049 102 ALFSSGMSAIATTLLAF--VRP-GDVILHSQPLYGGTETLLAKTFRNFGVG 149 (427)
T ss_pred EEEccHHHHHHHHHHHH--hCC-CCEEEEcCCCcccHHHHHHHHHHhcCcE
Confidence 67999999988777543 457 999999999999997764 345654
No 281
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=90.80 E-value=1 Score=45.79 Aligned_cols=104 Identities=9% Similarity=0.095 Sum_probs=67.9
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHH
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEK 92 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~qv~~ 92 (420)
|+.+|. ++.++..+|..-+ +.+-++.++++.+..|+.|.+.+.+.+ .+.++.. .|+|..+-| +.+++..
T Consensus 264 ~~~~~~-~~~aa~a~l~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~-~g~~~~~~~~~~~~~~~~ 334 (375)
T PRK04260 264 FGGNKL-SMAAASATLDIML----TAGFLEQALENGNYLQEQLQKALQDKE---TVTTVRG-LGYMIGIETTADLSQLVE 334 (375)
T ss_pred CCcCHH-HHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHhhCC---CeeEEec-cceEEEEEecCcHHHHHH
Confidence 443444 4666666664322 123345777778888888888776542 2333333 677776654 3555554
Q ss_pred HHHhcceEEcCCC----ceec-ccCCcCCHHHHHHHHHhh
Q psy16707 93 LIKEHSVYLTKDG----RISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 93 L~~~~~IY~~~~G----Rinv-agl~~~ni~~va~ai~~v 127 (420)
--.+++|++.+.| ||+. +.+++++|+.+.+.|.++
T Consensus 335 ~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 335 AARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 4457899998766 7787 889999999999988764
No 282
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=90.65 E-value=0.68 Score=47.83 Aligned_cols=62 Identities=10% Similarity=0.033 Sum_probs=46.3
Q ss_pred CCCCCCCCCCCH---HHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc
Q psy16707 195 LDKEYAPIIGAP---DFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF 271 (420)
Q Consensus 195 ~~~~Y~p~~G~~---~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~ 271 (420)
....|+- .|.| .|.++++++.-+++ + +.+.||++|+..++..+ +
T Consensus 40 ~~~~Y~r-~gnPt~~~lE~~lA~l~g~~~--------~----------------------~~~~sG~~Ai~~al~al--l 86 (377)
T TIGR01324 40 GELTYGR-RGTLTHFALQDAMCELEGGAG--------C----------------------YLYPSGLAAVTNSILAF--V 86 (377)
T ss_pred CCCcccC-CCCccHHHHHHHHHHHhCCCc--------E----------------------EEECcHHHHHHHHHHHh--c
Confidence 3467874 7885 88888888653321 2 56899999999887644 5
Q ss_pred CCCCCEEEEcCCCCCCcHH
Q psy16707 272 FPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 272 ~p~gd~VlvpdP~w~ny~~ 290 (420)
.| ||.|++++|.|+....
T Consensus 87 ~~-GD~Vl~~~~~y~~t~~ 104 (377)
T TIGR01324 87 KA-GDHVLMVDSAYEPTRY 104 (377)
T ss_pred CC-CCEEEEcCCCcHHHHH
Confidence 57 9999999999987654
No 283
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=90.52 E-value=0.83 Score=47.25 Aligned_cols=89 Identities=17% Similarity=0.253 Sum_probs=54.7
Q ss_pred CCchHHHHHHHHHHHccCCCCCCCCCC--CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeec
Q psy16707 177 PYVLPSVKQADEIVLNKNLDKEYAPII--GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQG 254 (420)
Q Consensus 177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~--G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt 254 (420)
.+.++.+.++......+.....|.... -..+|++.++++. |.+ .+ +.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~-g~~-------~~----------------------v~~ 82 (390)
T PRK08133 33 SFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALE-GAE-------AC----------------------VAT 82 (390)
T ss_pred CcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHh-CCC-------cE----------------------EEE
Confidence 345566666655543221223354322 2457788888765 422 12 568
Q ss_pred ccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707 255 ISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE 298 (420)
Q Consensus 255 ~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~ 298 (420)
.||+.|+..++..+ +.| ||.|++++|.|+..... ++..|++
T Consensus 83 ssG~~Ai~~al~al--~~~-Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 127 (390)
T PRK08133 83 ASGMAAILAVVMAL--LQA-GDHVVSSRSLFGSTVSLFEKIFARFGIE 127 (390)
T ss_pred CCHHHHHHHHHHHH--hCC-CCEEEEccCcchhHHHHHHHHHHHcCcE
Confidence 99999999877544 457 99999999999775543 3445654
No 284
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=90.46 E-value=2.3 Score=42.43 Aligned_cols=90 Identities=17% Similarity=0.212 Sum_probs=59.0
Q ss_pred HHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHHHHHHHhcce
Q psy16707 22 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSV 99 (420)
Q Consensus 22 Ga~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~qv~~L~~~~~I 99 (420)
+...+..+|.+.+ | ++.++++++..|..|.+.|++. + .|. +....|+|-...+. .+++...-.+++|
T Consensus 245 ~~~~~~~~l~~~~----~---~~~~~~~~~~~~~~l~~~L~~~--~-g~~-~~~~~g~~~~~~~~~~~~~~~~~L~~~gI 313 (346)
T TIGR01141 245 AQAAAIAALRDDD----F---IEKTVEEINAERERLYDGLKKL--P-GLE-VYPSDANFVLIRFPRDADALFEALLEKGI 313 (346)
T ss_pred HHHHHHHHhCCHH----H---HHHHHHHHHHHHHHHHHHHHhc--C-CCE-ECCCcCCEEEEecCCCHHHHHHHHHHCCe
Confidence 4444566777643 4 5668889999999999999875 2 254 44456777666553 4555443356799
Q ss_pred EEcCC-------C--ceecccCCcCCHHHHHHHH
Q psy16707 100 YLTKD-------G--RISMAGVTSKNVGYLAKAI 124 (420)
Q Consensus 100 Y~~~~-------G--Rinvagl~~~ni~~va~ai 124 (420)
++.+. | ||+++ ++.++++++++|
T Consensus 314 ~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l 345 (346)
T TIGR01141 314 IVRDLNSYPGLPNCLRITVG--TREENDRFLAAL 345 (346)
T ss_pred EEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHh
Confidence 98642 2 45554 667888888776
No 285
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=90.46 E-value=1.4 Score=45.26 Aligned_cols=80 Identities=16% Similarity=0.133 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--cCCC------HHHHHHHHHhCCeEEeCCC----cEEEc-cc
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGLN------ATQVEKLIKEHSVYLTKDG----RISMA-GV 403 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--~~l~------~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl 403 (420)
+.++.+++.+.|.+.|++++.+ +-......|.|.. ++.+ .++++.| .+.||++.|.+ ||+.. .+
T Consensus 308 l~~~~~~~~~~~~~~L~~l~~~--~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l-~~~Gv~v~~~~~~~lRi~p~l~~ 384 (401)
T TIGR01885 308 LAENAEKLGEIFRDQLKKLPKP--IITEVRGRGLLNAIVIDESKTGRTAWDLCLKL-KEKGLLAKPTHGNIIRLAPPLVI 384 (401)
T ss_pred HHHHHHHHHHHHHHHHHhccCC--ceeEEeecCeeEEEEeccCcchhHHHHHHHHH-HhCCEEEEecCCCEEEEeCCccC
Confidence 3367777788999999988632 2111233455543 3332 2345666 57899998864 77753 57
Q ss_pred CCCCHHHHHHHHHHHh
Q psy16707 404 TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 404 ~~~ni~~la~AI~~vv 419 (420)
++++|+++.+++.+++
T Consensus 385 t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 385 TEEQLDEGLEIIKKVI 400 (401)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 8899999999998875
No 286
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=90.46 E-value=2.3 Score=43.81 Aligned_cols=82 Identities=17% Similarity=0.123 Sum_probs=54.5
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--------
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------- 86 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------- 86 (420)
+.+|+.....++...|.+. +..-++.++++++..|..|.+.|+.. ++ |.....+-|+|.+.-++
T Consensus 277 ~~~~~~~~q~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~~g~f~~~~~~~~~~~~~~ 348 (403)
T TIGR01265 277 ILGPATIVQGALPDILENT-----PQEFFDGKISVLKSNAELCYEELKDI--PG-LVCPKPEGAMYLMVKLELELFPEIK 348 (403)
T ss_pred hcCCChHHHHHHHHHHHhC-----hHHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceecCCCceeEEEEeccccccCCCC
Confidence 4566666677777777641 23344556667777788999999764 22 44445678999988663
Q ss_pred -HHHH-HHHHHhcceEEcCC
Q psy16707 87 -ATQV-EKLIKEHSVYLTKD 104 (420)
Q Consensus 87 -~~qv-~~L~~~~~IY~~~~ 104 (420)
..++ +.|.++++|.+.+.
T Consensus 349 ~~~~~~~~l~~~~gv~v~pg 368 (403)
T TIGR01265 349 DDVDFCEKLVREESVICLPG 368 (403)
T ss_pred CHHHHHHHHHHhCCEEEeCc
Confidence 3344 66667889988754
No 287
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=90.42 E-value=2.9 Score=42.07 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=62.2
Q ss_pred cchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHH-HHHH
Q psy16707 19 PIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQ-VEKL 93 (420)
Q Consensus 19 P~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~q-v~~L 93 (420)
+..+..++..+|++. .|. +.+++.++..|+.|.+.|++.+ |... ...|+|....+ +.++ ++.|
T Consensus 257 ~~~~~~~a~~~l~~~----~~~---~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~g~~~~i~~~~~~~~~~~~~~L 324 (367)
T PRK02731 257 NSLALAAAVAALDDD----AFV---EKSRALNAEGMAWLTEFLAELG----LEYI-PSVGNFILVDFDDGKDAAEAYQAL 324 (367)
T ss_pred CHHHHHHHHHHhCCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CccC-CCCceEEEEECCCCCCHHHHHHHH
Confidence 345566777788763 453 4456666777888888888763 3333 34577877665 4444 4455
Q ss_pred HHhcceEEcCC--------CceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTKD--------GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~~--------GRinvagl~~~ni~~va~ai~~v 127 (420)
.+++|++... =||++. +...++.+++++.++
T Consensus 325 -~~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~ 363 (367)
T PRK02731 325 -LKRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEF 363 (367)
T ss_pred -HHCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHH
Confidence 4689998753 267775 678899999998876
No 288
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=90.23 E-value=2.7 Score=43.78 Aligned_cols=93 Identities=17% Similarity=0.226 Sum_probs=74.0
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeec
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT 83 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~ 83 (420)
..++.+.....++||..+=..+...|++++- . .+++.|+++.++-|..|++.|.+.+. |.... -+-+||.|.
T Consensus 257 ~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~---~~~~~~~~~~~~rrd~l~~~l~~~~g---~~~~~~p~Ga~Y~~~ 329 (393)
T COG0436 257 AALRKLKSYLTSCAPTPAQYAAIAALNGPQS-D---EVVEEMREEYRERRDLLVEALNEIGG---LSVVKPPEGAFYLFP 329 (393)
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHhcCccc-h---HHHHHHHHHHHHHHHHHHHHHHhcCC---eeeccCCCeeEEEEe
Confidence 3455667778889999999999999998754 3 45666778999999999999987553 77777 678888888
Q ss_pred CCC-----HHHHHHHHHhcceEEcCC
Q psy16707 84 GLN-----ATQVEKLIKEHSVYLTKD 104 (420)
Q Consensus 84 gL~-----~~qv~~L~~~~~IY~~~~ 104 (420)
.++ .+=++.|-++++|-+++.
T Consensus 330 ~i~~~~d~~~f~~~Ll~~~gV~v~PG 355 (393)
T COG0436 330 KIPELLDSEEFAKKLLEEAGVAVVPG 355 (393)
T ss_pred ecCCCCCHHHHHHHHHHhCCEEEecc
Confidence 776 467889999999998763
No 289
>PRK07337 aminotransferase; Validated
Probab=90.22 E-value=2.8 Score=42.74 Aligned_cols=108 Identities=12% Similarity=0.168 Sum_probs=66.2
Q ss_pred HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC
Q psy16707 7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN 86 (420)
Q Consensus 7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~ 86 (420)
+..+....+.+++..+...+...|.+..+ +.++.+++.++..|+.+.+.|++.+. .. .+.-+-|||-+.-+.
T Consensus 254 l~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~r~~~~~~L~~~~~--~~-~~~p~~g~f~~~~~~ 325 (388)
T PRK07337 254 FEKLAQNLFICASALAQHAALACFEPDTL-----AIYERRRAEFKRRRDFIVPALESLGF--KV-PVMPDGAFYVYADCR 325 (388)
T ss_pred HHHHHHHhccCCChHHHHHHHHHhccCch-----HHHHHHHHHHHHHHHHHHHHHHhcCC--cc-ccCCCeeEEEEEecc
Confidence 33444444445566666666677764332 23455688888889999999987532 11 134577999998653
Q ss_pred ---------HHH-HHHHHHhcceEEcCC---------C--ceecccCCcCCHHHHHHHHHh
Q psy16707 87 ---------ATQ-VEKLIKEHSVYLTKD---------G--RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 87 ---------~~q-v~~L~~~~~IY~~~~---------G--Rinvagl~~~ni~~va~ai~~ 126 (420)
.++ ++.|-++++|.+.+. | ||+++. + -+.+.++|..
T Consensus 326 ~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~---~~~l~~~l~r 382 (388)
T PRK07337 326 GVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-S---MSRLEEAVAR 382 (388)
T ss_pred cccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-C---HHHHHHHHHH
Confidence 445 456778889988532 1 667664 2 4555555544
No 290
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=90.22 E-value=0.4 Score=49.78 Aligned_cols=45 Identities=24% Similarity=0.234 Sum_probs=41.3
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.+||.||++++..|. +.| ||+|++|.=+|....+.+-..|++
T Consensus 53 va~~sgT~AL~laL~al~-ig~-GDeVI~ps~TfvATan~i~~~Ga~ 97 (374)
T COG0399 53 VAVSSGTAALHLALLALA-IGP-GDEVIVPSFTFVATANAVLLVGAK 97 (374)
T ss_pred EEecChHHHHHHHHHhcC-CCC-CCEEEecCCchHHHHHHHHHcCCe
Confidence 679999999999998776 778 999999999999999999999997
No 291
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=90.06 E-value=2.6 Score=43.41 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=64.7
Q ss_pred ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-CCCCCcccCC-----CCceEEe-cCC
Q psy16707 305 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-G-SNKPWNHITD-----QIGMFCY-TGL 376 (420)
Q Consensus 305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g-~~~~w~~i~~-----q~GmF~~-~~l 376 (420)
..++|+..+...+...| +-.-...++..+++....++.+.+.|++. | .+ .+..+.+ ..|++++ .+.
T Consensus 283 ~~GT~~~~~~~~l~~al-----~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~-~~~i~~~~~~~~r~~~v~~~~~~ 356 (406)
T TIGR01814 283 RISNPPILSVAALRGSL-----DIFDQAGMEALRKKSLLLTDYLEELIKARCGGPP-VLTIITPRDHAQRGCQLSLTHPV 356 (406)
T ss_pred eeCCccHHHHHHHHHHH-----HHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC-ceEEeCCCChhhcCCeEEEEecC
Confidence 34566665544443323 11111234666788888888888888764 2 11 1221211 2456554 233
Q ss_pred CHHHH-HHHHHhCCeEEeCC--C--cEEEc--ccCCCCHHHHHHHHHHHh
Q psy16707 377 NATQV-EKLIKEHSVYLTKD--G--RISMA--GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 377 ~~~~v-~~Ll~e~~Vy~~p~--g--Ris~a--gl~~~ni~~la~AI~~vv 419 (420)
+.+.+ +.| .++||++... + |||++ ..+.+.|++++++|++++
T Consensus 357 ~~~~~~~~L-~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 357 PGKAVFQAL-IKRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred CHHHHHHHH-HHCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 45555 555 6789998753 2 99984 458899999999998865
No 292
>PRK12414 putative aminotransferase; Provisional
Probab=89.88 E-value=4.1 Score=41.60 Aligned_cols=98 Identities=17% Similarity=0.220 Sum_probs=64.1
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NAT 88 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------~~~ 88 (420)
.+++.....++..+|.+++ .|. .+++.++..|..+++.|++.+ |....-+-|||-+.-+ +.+
T Consensus 266 ~~~s~~~q~a~~~~l~~~~---~~~----~~~~~~~~~r~~l~~~L~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~~ 334 (384)
T PRK12414 266 FSADTPMQHAFAEALAEPA---SYL----GLGAFYQRKRDLLARELAGSR----FELLPSEGSFFMLARFRHFSDESDSD 334 (384)
T ss_pred cCCCcHHHHHHHHHhcCCh---HHH----HHHHHHHHHHHHHHHHHHhCC----CeecCCCcceEEEEcccccCCCCHHH
Confidence 3455566777888888764 232 356777888999999998753 5555567788887532 456
Q ss_pred HHHHHHHhcceEEcCCC------------ceecccCCcCCHHHHHHHHHhhC
Q psy16707 89 QVEKLIKEHSVYLTKDG------------RISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 89 qv~~L~~~~~IY~~~~G------------Rinvagl~~~ni~~va~ai~~v~ 128 (420)
.+..+-++++|.+.+.. ||+++. .-+.+.+++...+
T Consensus 335 ~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~----~~~~~~~~~~rl~ 382 (384)
T PRK12414 335 FVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK----DDATLVEGARRLC 382 (384)
T ss_pred HHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC----CHHHHHHHHHHHh
Confidence 67677788999887632 344442 2566666665543
No 293
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=89.79 E-value=1.3 Score=46.59 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=28.5
Q ss_pred HhCCeEEeCCC------cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 386 KEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 386 ~e~~Vy~~p~g------Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
.++||.+.|++ ||+++. ++++.|+...++|.+++
T Consensus 401 ~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l 441 (451)
T PRK06918 401 NKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESL 441 (451)
T ss_pred HHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 68999999853 888865 88999999999988875
No 294
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=89.71 E-value=6.9 Score=39.28 Aligned_cols=93 Identities=27% Similarity=0.450 Sum_probs=58.5
Q ss_pred chHHHHHHHHHhCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CC--CCcc-----------cCC
Q psy16707 310 PIHGARIVQEILGDPKLK---AQWLTEVKGMADRIISMRQSLKDNLQKEGS-------NK--PWNH-----------ITD 366 (420)
Q Consensus 310 p~~ga~iv~~IL~dp~L~---~~w~~el~~m~~r~~~~R~~l~~~L~~~g~-------~~--~w~~-----------i~~ 366 (420)
...|+-|+..+-+=|... ..|.+|++. .| -|.++|+++|. |. ++-+ -.+
T Consensus 258 T~rGapivTlmASfP~V~eRVkrWdeEv~k-------aR-~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~ 329 (382)
T COG1103 258 TVRGAPIVTLMASFPHVVERVKRWDEEVEK-------AR-WFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHK 329 (382)
T ss_pred cccCchHHHHHhcCHHHHHHHHHHHHHHHH-------HH-HHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCc
Confidence 577888887766666554 367777763 22 24555665541 11 0000 012
Q ss_pred CCceEEecCCCHHHHHHHHHhCCeEEeCCC-----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 367 QIGMFCYTGLNATQVEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 367 q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~g-----Ris~agl~~~ni~~la~AI~~vv 419 (420)
..|+|.| +.| ++.||.-..-| .+|+-|++.+.++|+++|+++++
T Consensus 330 r~gyFlY--------~EL-K~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~ 378 (382)
T COG1103 330 RKGYFLY--------EEL-KKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIA 378 (382)
T ss_pred CCceeeH--------HHH-HhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHH
Confidence 3344444 234 67788766544 89999999999999999999875
No 295
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=89.64 E-value=2.9 Score=43.03 Aligned_cols=81 Identities=11% Similarity=0.098 Sum_probs=51.8
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-H
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-T 88 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~ 88 (420)
.+.+++.-.-.++..+|.+... .|. +.+++.++..|+.+.+.|++.+ +....-..|+|.+.-+. . +
T Consensus 283 ~~~~~s~~~q~~~~~~l~~~~~--~~~---~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~v~l~~~~~~~~ 353 (402)
T TIGR03542 283 KFNGASYPVQRAAEAAYAGEGL--QPI---LEAISYYMENARILRKALEAAG----FKVYGGEHAPYLWVKTPEGISSWD 353 (402)
T ss_pred cccCCCHHHHHHHHHHHcCcch--hHH---HHHHHHHHHHHHHHHHHHHhcC----ceecCCCceeEEEEECCCCCCHHH
Confidence 3444544455566778877554 243 3345667777888888887753 44333356888888764 3 4
Q ss_pred HHHHHHHhcceEEcC
Q psy16707 89 QVEKLIKEHSVYLTK 103 (420)
Q Consensus 89 qv~~L~~~~~IY~~~ 103 (420)
-.+.|.++++|.+.+
T Consensus 354 l~~~l~~~~gv~v~p 368 (402)
T TIGR03542 354 FFDFLLYQYHVVGTP 368 (402)
T ss_pred HHHHHHHhCCEEEeC
Confidence 466777888998865
No 296
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=89.55 E-value=2.6 Score=43.22 Aligned_cols=99 Identities=16% Similarity=0.262 Sum_probs=65.2
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----HHH
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQ 89 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~~q 89 (420)
.|+ ++.-+-.++...|.++ +| ++.++.+++..|..|.+.|++++ |-.+..+.|+|.+.-++ .++
T Consensus 268 ~~~-~~~~~q~aa~~aL~~~----~~---~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~ 335 (380)
T PLN03026 268 PYN-VSVAAEVAACAALSNP----KY---LEDVKNALVEERERLFGLLKEVP----FLEPYPSDANFILCRVTSGRDAKK 335 (380)
T ss_pred CCC-CCHHHHHHHHHHhhCH----HH---HHHHHHHHHHHHHHHHHHHHHCC----CCeECCCCCeEEEEECCCCCCHHH
Confidence 344 4444556667778763 45 44567788888999999998763 22235577888877554 344
Q ss_pred H-HHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 90 V-EKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v-~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+ +.|. +++|.+..- | ||+++ ++..++++.+|+..+
T Consensus 336 ~~~~l~-~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 336 LKEDLA-KMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred HHHHHH-HCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 4 4555 789988532 2 67766 566789999998753
No 297
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=89.54 E-value=2.4 Score=42.80 Aligned_cols=100 Identities=10% Similarity=0.042 Sum_probs=67.7
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HH-HH
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--AT-QV 90 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~-qv 90 (420)
...+++..+..++..+|+++ .| ++.++++++..|+.+.+.|++.. + |.. ....|+|-++-+. .+ =+
T Consensus 240 ~~~~~~~~~~~~a~~~l~~~----~~---~~~~~~~~~~~r~~l~~~L~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~ 308 (356)
T PRK08056 240 MPWSINAFAALAGEVILQDR----AY---QQATWQWLAEEGARFYQALCALP--L-LTV-WPGRANYLFLRCERPDIDLQ 308 (356)
T ss_pred CCCchhHHHHHHHHHHhCCH----HH---HHHHHHHHHHHHHHHHHHHhcCC--C-cEE-cCCCCcEEEEEcCCChHHHH
Confidence 33455667888888888763 45 36777888888999999997652 2 443 3456888887653 23 34
Q ss_pred HHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 91 EKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 91 ~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.|. +++|.+.+ .| ||+++ ++.+.+++.+++.++
T Consensus 309 ~~l~-~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~ 352 (356)
T PRK08056 309 RALL-TQRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNV 352 (356)
T ss_pred HHHH-HCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHH
Confidence 4555 67987632 12 66655 458889999999876
No 298
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=89.43 E-value=2.4 Score=43.70 Aligned_cols=80 Identities=19% Similarity=0.235 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccce-eecCCC--HHHH-HHHHHhcceEEcCC---------C--ceec
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF-CYTGLN--ATQV-EKLIKEHSVYLTKD---------G--RISM 109 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmF-s~~gL~--~~qv-~~L~~~~~IY~~~~---------G--Rinv 109 (420)
.+++++...|..|.+.|++.| |..+..+.+++ ..+|.. ..++ ++|.++++|++... + ||++
T Consensus 300 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~ 375 (410)
T PRK13392 300 TERDAHQDRVAALKAKLNANG----IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITP 375 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEE
Confidence 345677777888888887754 33333444554 234532 2334 45777889998642 2 5555
Q ss_pred c-cCCcCCHHHHHHHHHhhC
Q psy16707 110 A-GVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 110 a-gl~~~ni~~va~ai~~v~ 128 (420)
. ..+..++++++++|.++.
T Consensus 376 ~~~~t~edid~l~~aL~~~~ 395 (410)
T PRK13392 376 TPLHDDEDIDALVAALVAIW 395 (410)
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 4 567789999999999884
No 299
>PRK07908 hypothetical protein; Provisional
Probab=89.41 E-value=2 Score=43.07 Aligned_cols=81 Identities=16% Similarity=0.225 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHHHHHHHHhcceEEcCC--------C--ceec
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD--------G--RISM 109 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~qv~~L~~~~~IY~~~~--------G--Rinv 109 (420)
++++.++++++..|..+.+.|++. .|.....+.|+|-+.-++ .+++..+-++++|.+.+. + ||++
T Consensus 253 ~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~p~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~ 328 (349)
T PRK07908 253 AEAAADAARLAADRAEMVAGLRAV----GARVVDPAAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV 328 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC----CcEeccCCCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe
Confidence 345678899999999999999875 255455477999888775 456665557889988642 1 5676
Q ss_pred ccCCcCCHHHHHHHHHhh
Q psy16707 110 AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 110 agl~~~ni~~va~ai~~v 127 (420)
+ ++..++.+++|+..+
T Consensus 329 ~--~~~~~~~l~~al~~~ 344 (349)
T PRK07908 329 R--PRAEVPVLVQALAEI 344 (349)
T ss_pred C--CCccHHHHHHHHHHH
Confidence 3 678999999999876
No 300
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=89.34 E-value=0.68 Score=47.95 Aligned_cols=56 Identities=14% Similarity=0.213 Sum_probs=41.8
Q ss_pred CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707 201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV 280 (420)
Q Consensus 201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv 280 (420)
|..-...|+++++++.-+. + + +.+.||++|+.+++..+ +.| ||.|++
T Consensus 50 ~~pt~~~L~~~lA~l~g~~-------~-~----------------------i~~~sg~~Ai~~~l~~l--~~~-GD~Vl~ 96 (386)
T PRK08045 50 GNPTRDVVQRALAELEGGA-------G-A----------------------VLTNTGMSAIHLVTTVF--LKP-GDLLVA 96 (386)
T ss_pred CCccHHHHHHHHHHHhCCC-------e-E----------------------EEECCHHHHHHHHHHHH--cCC-CCEEEE
Confidence 4445678888888875321 1 2 67999999999988644 457 999999
Q ss_pred cCCCCCCcH
Q psy16707 281 PTPTWGNHI 289 (420)
Q Consensus 281 pdP~w~ny~ 289 (420)
++|+|+.+.
T Consensus 97 ~~~~y~~~~ 105 (386)
T PRK08045 97 PHDCYGGSY 105 (386)
T ss_pred cCCCcHHHH
Confidence 999999533
No 301
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=89.33 E-value=2.1 Score=43.41 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=36.4
Q ss_pred cccceeecCCC--HHHHHHHHHhcceEEcCCC----ceec-ccCCcCCHHHHHHHHHhh
Q psy16707 76 QIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG----RISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 76 Q~GmFs~~gL~--~~qv~~L~~~~~IY~~~~G----Rinv-agl~~~ni~~va~ai~~v 127 (420)
..|+|...-+. .+.+..+-.+.+|++.+.| ||+. ..++.++|+.+++.|.++
T Consensus 318 ~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 318 GKGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred ecceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 46766555453 3344444467799998766 7776 578999999999998764
No 302
>PRK09064 5-aminolevulinate synthase; Validated
Probab=89.29 E-value=2.7 Score=43.12 Aligned_cols=83 Identities=19% Similarity=0.249 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-CC--CHHHH-HHHHHhcceEEcC-------C--C--
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-GL--NATQV-EKLIKEHSVYLTK-------D--G-- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-gL--~~~qv-~~L~~~~~IY~~~-------~--G-- 105 (420)
++....++++..+|+.|.+.|++.+ |+.+..+.+++.+. +- +..++ ++|.++++|++.. . +
T Consensus 296 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~l 371 (407)
T PRK09064 296 KESNEERERHQERAAKLKAALDAAG----IPVMPNESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERL 371 (407)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceE
Confidence 3334557888899999999998754 44444444444332 32 22333 4566778999843 1 2
Q ss_pred ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 106 RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 Rinva-gl~~~ni~~va~ai~~v 127 (420)
||++. ..+..++++++++|.++
T Consensus 372 Ris~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 372 RITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHH
Confidence 56653 44778999999999987
No 303
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=89.29 E-value=3 Score=43.78 Aligned_cols=107 Identities=21% Similarity=0.198 Sum_probs=55.5
Q ss_pred HHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCC---CCC------CHHHHHHHHHHHc
Q psy16707 147 SNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAP---IIG------APDFGKLAAQLAY 217 (420)
Q Consensus 147 i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p---~~G------~~~fr~a~~~~~~ 217 (420)
++.+.+.-.+. ..+.|||...+ . .+.|.|++|......+.-..+|.. ..| ++.+...-++.+|
T Consensus 8 i~~li~~e~~r-q~~~l~LiaSE-----N--~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF 79 (399)
T PF00464_consen 8 IYELIEKEEER-QRSTLNLIASE-----N--YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELF 79 (399)
T ss_dssp HHHHHHHHHHH-HHHSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhcCccccCcc-----c--ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHh
Confidence 45555444332 34669998885 2 578888888766543322223321 334 4555666666778
Q ss_pred CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
|.+. +.--+. ||+.||+.|...+...| +.| ||+|+..++.-+-|
T Consensus 80 ~~~~----~~w~an--------------------vqp~SGs~An~av~~aL--l~p-GD~Im~l~l~~GGH 123 (399)
T PF00464_consen 80 GAEP----KEWYAN--------------------VQPHSGSQANLAVYMAL--LKP-GDTIMGLSLPHGGH 123 (399)
T ss_dssp T-ST----TTEEEE-----------------------SSHHHHHHHHHHHH--T-T-T-EEEEEEGGGT--
T ss_pred CCCc----ccceEE--------------------eecCCchHHHHHHHHHH--Hhh-cCcEEecChhhccc
Confidence 8751 122333 89999999887766544 458 99999987765544
No 304
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=89.21 E-value=0.9 Score=46.98 Aligned_cols=58 Identities=17% Similarity=0.169 Sum_probs=44.3
Q ss_pred CCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcC
Q psy16707 203 IGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPT 282 (420)
Q Consensus 203 ~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvpd 282 (420)
....+|.+.++++.-+++ + +.+.||+.|+..++..+ +.| ||.|++++
T Consensus 53 p~~~~lE~~lA~l~g~~~--------~----------------------l~~~sG~~Ai~~~l~~l--l~~-GD~Vlv~~ 99 (385)
T PRK08574 53 PTLRPLEEALAKLEGGVD--------A----------------------LAFNSGMAAISTLFFSL--LKA-GDRVVLPM 99 (385)
T ss_pred ccHHHHHHHHHHHhCCCc--------E----------------------EEeCCHHHHHHHHHHHH--hCC-CCEEEEcC
Confidence 356789999998763322 1 56899999998877533 457 99999999
Q ss_pred CCCCCcHHHHh
Q psy16707 283 PTWGNHIPICK 293 (420)
Q Consensus 283 P~w~ny~~i~~ 293 (420)
|+|+.+...++
T Consensus 100 ~~y~~~~~~~~ 110 (385)
T PRK08574 100 EAYGTTLRLLK 110 (385)
T ss_pred CCchhHHHHHH
Confidence 99999877664
No 305
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=89.19 E-value=0.62 Score=47.46 Aligned_cols=45 Identities=27% Similarity=0.294 Sum_probs=38.6
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.+||.||++++..+ .+.| ||+|++|.-+|+.....+..+|++
T Consensus 44 ~~~~sgt~Al~~al~~l-~~~~-gdeVi~p~~t~~~~~~ai~~~G~~ 88 (363)
T PF01041_consen 44 VAVSSGTSALHLALRAL-GLGP-GDEVIVPAYTFPATASAILWAGAE 88 (363)
T ss_dssp EEESSHHHHHHHHHHHT-TGGT-TSEEEEESSS-THHHHHHHHTT-E
T ss_pred EEeCChhHHHHHHHHhc-CCCc-CceEecCCCcchHHHHHHHHhccE
Confidence 67999999999999866 3567 999999999999999999999997
No 306
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=89.07 E-value=2.4 Score=42.02 Aligned_cols=83 Identities=12% Similarity=0.220 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecCC-------C-HHHHHHHHHhcceEEcCC-----C-
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGL-------N-ATQVEKLIKEHSVYLTKD-----G- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~gL-------~-~~qv~~L~~~~~IY~~~~-----G- 105 (420)
+.++++.+|+..+++.|.+.|.+... +..+. .+.+|++|.-. . .+-.++|.++..+++... +
T Consensus 244 ~g~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~ 320 (345)
T cd06450 244 DGYGEHIDRIVDLAKYLAELIRADPG---FELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNV 320 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEE
Confidence 56788899999999999999976532 33222 46788887622 2 345567766545555432 2
Q ss_pred -ceecccC--CcCCHHHHHHHHHh
Q psy16707 106 -RISMAGV--TSKNVGYLAKAIHA 126 (420)
Q Consensus 106 -Rinvagl--~~~ni~~va~ai~~ 126 (420)
||++..- +.++||+++++|.+
T Consensus 321 lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 321 LRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHh
Confidence 8888874 77899999999875
No 307
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=89.04 E-value=1.8 Score=43.63 Aligned_cols=81 Identities=16% Similarity=0.245 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHHHHhcceEEcCCC----ceeccc-CCcCCHH
Q psy16707 46 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEHSVYLTKDG----RISMAG-VTSKNVG 118 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~qv~~L~~~~~IY~~~~G----Rinvag-l~~~ni~ 118 (420)
++++++.+|+.+.+.|++.+....|..+.. .|+|-..-+ +.+++...-.+.+|++.+.| ||+++. .+..+++
T Consensus 291 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~ 369 (379)
T TIGR00707 291 LLENVKEKGDYFKERLEELGKNYPNKEVRG-KGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEID 369 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCcccc-CceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHH
Confidence 455566666666666655433223434433 465433333 34454444456799998765 666654 7889999
Q ss_pred HHHHHHHhh
Q psy16707 119 YLAKAIHAN 127 (420)
Q Consensus 119 ~va~ai~~v 127 (420)
.+.++|.++
T Consensus 370 ~~~~~l~~~ 378 (379)
T TIGR00707 370 EAVSALEEA 378 (379)
T ss_pred HHHHHHHHh
Confidence 999988764
No 308
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=89.04 E-value=0.77 Score=45.30 Aligned_cols=44 Identities=11% Similarity=-0.075 Sum_probs=36.2
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.|.|+|.++..++..+ +.| ||.|+++.|+++++...+..+|++
T Consensus 79 ~~~~Gst~a~~~~l~al--~~~-gd~Vlv~~~~h~s~~~~~~~~g~~ 122 (294)
T cd00615 79 FLVNGTSSSNKAVILAV--CGP-GDKILIDRNCHKSVINGLVLSGAV 122 (294)
T ss_pred EEcCcHHHHHHHHHHHc--CCC-CCEEEEeCCchHHHHHHHHHCCCE
Confidence 45888899988876533 557 999999999999988888888865
No 309
>PLN02656 tyrosine transaminase
Probab=88.96 E-value=3.8 Score=42.33 Aligned_cols=101 Identities=19% Similarity=0.156 Sum_probs=64.3
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cccccccceeecCCC-------
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLN------- 86 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~-~i~~Q~GmFs~~gL~------- 86 (420)
+.+++.....++..+|++.. ..| ++.++++++..|..+.+.|++.+ + +. ...-+-|||.+.-++
T Consensus 278 ~~~~s~~~q~a~~~~l~~~~--~~~---~~~~~~~~~~~r~~~~~~L~~~~--~-~~~~~~p~gg~~~w~~l~~~~~~~~ 349 (409)
T PLN02656 278 LGGPATFIQAAVPTILEQTD--ESF---FKKTINILKQSSDICCDRIKEIP--C-ITCPHKPEGSMAVMVKLNLSLLEDI 349 (409)
T ss_pred hcCCCHHHHHHHHHHHhcCc--HHH---HHHHHHHHHHHHHHHHHHHhhCC--C-CcCCcCCCeEEEEEEecchhhcCCC
Confidence 44566677888888887522 234 55567778888999999998752 2 22 234577899886552
Q ss_pred --H-HHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707 87 --A-TQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 87 --~-~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v 127 (420)
. +.+..+-++.+|.+.+.. ||+++. +-+.+.+++...
T Consensus 350 ~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~----~~e~l~eal~rl 397 (409)
T PLN02656 350 SDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA----DPSSLEEALGRI 397 (409)
T ss_pred CCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC----CHHHHHHHHHHH
Confidence 3 335566678899887642 566663 245566665443
No 310
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=88.94 E-value=3.4 Score=42.26 Aligned_cols=82 Identities=18% Similarity=0.302 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-ccccccee--ecCCCHHHHHHHHHhcceEEcC--------------CC
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFC--YTGLNATQVEKLIKEHSVYLTK--------------DG 105 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-~~Q~GmFs--~~gL~~~qv~~L~~~~~IY~~~--------------~G 105 (420)
...+++|+..+|+.|.+.|+++. + +.-+ ..+.++++ +-+++.+++..+-++++|.+.. .|
T Consensus 294 ~~~~~~~~~~l~~~l~~~l~~~~--g-~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~ 370 (401)
T PRK10874 294 INQAESWSRSLATLAEDALAKLP--G-FRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTG 370 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--C-EEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCC
Confidence 34578999999999999987642 1 1111 13445554 4477767775444667997753 12
Q ss_pred --ceecccCCc-CCHHHHHHHHHhh
Q psy16707 106 --RISMAGVTS-KNVGYLAKAIHAN 127 (420)
Q Consensus 106 --Rinvagl~~-~ni~~va~ai~~v 127 (420)
|||+...|+ .+|+.++++|.++
T Consensus 371 ~iRiS~~~~nt~edid~ll~al~~~ 395 (401)
T PRK10874 371 TLRASFAPYNTQSDVDALVNAVDRA 395 (401)
T ss_pred EEEEEecccCCHHHHHHHHHHHHHH
Confidence 666665554 7899999998875
No 311
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=88.92 E-value=0.88 Score=47.33 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=29.9
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.+.+|+.|+.+++..+ +.| ||.|++++|+|+....++
T Consensus 83 i~~ssG~~Ai~~~l~al--l~~-GD~Vi~~~~~y~~~~~~~ 120 (398)
T PRK08249 83 TAFSTGMAAISNTLYTF--LKP-GDRVVSIKDTYGGTNKIF 120 (398)
T ss_pred EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCchHHHHHHH
Confidence 56889999998887533 457 999999999999765443
No 312
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=88.84 E-value=4 Score=41.04 Aligned_cols=87 Identities=10% Similarity=0.129 Sum_probs=52.2
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
.+++.+....-.++|.....++...|.++ .|. +..+++++..|..+.+.|++.+ |.....+-|+|.+.-
T Consensus 226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~---~~~r~~l~~~~~~~~~~l~~~g----~~~~~~~g~~~~~~~ 294 (350)
T TIGR03537 226 SFLRKLRANFGVASPDFVQAAAKAAWSDD----NHV---LERRKIFKRKRDLFIEFFNKVG----LEYLYPDATFYLWVK 294 (350)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhCCc----HHH---HHHHHHHHHHHHHHHHHHHHCC----CcccCCCeEEEEEEE
Confidence 34444332222244444555555556542 354 4467888888989998888753 444556779987664
Q ss_pred C----C-HHHHHHHHHhcceEEcC
Q psy16707 85 L----N-ATQVEKLIKEHSVYLTK 103 (420)
Q Consensus 85 L----~-~~qv~~L~~~~~IY~~~ 103 (420)
+ + .+-++.|. +++|++.+
T Consensus 295 ~~~~~~~~~l~~~L~-~~gv~v~~ 317 (350)
T TIGR03537 295 VPSGIDAKDYALRLL-ENGIVVAP 317 (350)
T ss_pred CCCCCCHHHHHHHHH-HCCEEEcC
Confidence 4 3 33455665 47999874
No 313
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=88.83 E-value=4.2 Score=41.86 Aligned_cols=85 Identities=19% Similarity=0.320 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeec-----CCCHHHHHHHHHhcceEEcC------------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLTK------------ 103 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-Q~GmFs~~-----gL~~~qv~~L~~~~~IY~~~------------ 103 (420)
.++++.+|++++|+.+.+.|++.| |..... ....|-+. +++.+++..+-++++|.+..
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~ 355 (416)
T PRK00011 280 EFKEYAQQVVKNAKALAEALAERG----FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFV 355 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCC----CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCC
Confidence 467788999999999999998754 222211 11122222 33556666555677888752
Q ss_pred CC--ceec-----ccCCcCCHHHHHHHHHhhCCC
Q psy16707 104 DG--RISM-----AGVTSKNVGYLAKAIHANGSL 130 (420)
Q Consensus 104 ~G--Rinv-----agl~~~ni~~va~ai~~v~~~ 130 (420)
.+ |++. .|++.+++++++++|.++...
T Consensus 356 ~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 356 TSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 11 4432 367889999999999987443
No 314
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=88.81 E-value=1.6 Score=45.09 Aligned_cols=80 Identities=15% Similarity=0.121 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CHHHHHHHHHhcceEEcCCC----ceecccC-Cc
Q psy16707 47 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG----RISMAGV-TS 114 (420)
Q Consensus 47 ~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------~~~qv~~L~~~~~IY~~~~G----Rinvagl-~~ 114 (420)
+++++..|+.|.+.|++.+....+..-....|+|...-+ +.+-++.|.+ .+|++...| ||+++-. +.
T Consensus 306 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~-~Gv~v~~~g~~~lRl~~~~~~~~ 384 (403)
T PRK05093 306 LEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAE-EGVMVLVAGPDVLRFAPSLVIEE 384 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHH-CCeEEecCCCCEEEEeCCCCCCH
Confidence 356666677777777765432222223445577766544 2234555654 589998765 5665555 88
Q ss_pred CCHHHHHHHHHhh
Q psy16707 115 KNVGYLAKAIHAN 127 (420)
Q Consensus 115 ~ni~~va~ai~~v 127 (420)
..|+...+.|.++
T Consensus 385 ~~i~~~~~~l~~~ 397 (403)
T PRK05093 385 ADIDEGLARFEKA 397 (403)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888888765
No 315
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=88.50 E-value=2.1 Score=44.56 Aligned_cols=85 Identities=7% Similarity=0.069 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH----HHHHHHHHhCCeEEeCCC------cEE
Q psy16707 330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA----TQVEKLIKEHSVYLTKDG------RIS 399 (420)
Q Consensus 330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~----~~v~~Ll~e~~Vy~~p~g------Ris 399 (420)
+.+.++.+.++++++.+.+.+.+.. +..-....|+|.|+-++. ..+...+.+.||++.+.+ ||+
T Consensus 316 l~~~~~~~g~~l~~~l~~l~~~~~~------~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~ 389 (412)
T TIGR02407 316 FEKAVQRKSEIIQERLDRIVAEYPE------LIKQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGPNDEVIKLL 389 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC------ceEeeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEE
Confidence 3455555555555554444433211 111244679999876642 233333457899997654 766
Q ss_pred Ecc-cCCCCHHHHHHHHHHHhC
Q psy16707 400 MAG-VTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 400 ~ag-l~~~ni~~la~AI~~vv~ 420 (420)
.+- ++++.++++.++++++++
T Consensus 390 p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 390 PPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh
Confidence 654 588889999999998863
No 316
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=88.43 E-value=4.5 Score=40.79 Aligned_cols=100 Identities=15% Similarity=0.231 Sum_probs=64.7
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHH-
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQ- 89 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~q- 89 (420)
+..|+. +.....++...|.|++ |.+ .++++++..|+.|.+.|++++ |... ..|+|.+..+ +.++
T Consensus 224 ~~~~~v-s~~~q~a~~~~L~~~~----~~~---~~~~~~~~~r~~l~~~L~~~g----~~~~--~~~~f~~~~~~~~~~l 289 (339)
T PRK06959 224 LGAWTV-SGPARHAVRAAFADAA----WQA---AMRERLAADGARLAALLRAHG----FAVH--ATPLFSWTDDPRAAAL 289 (339)
T ss_pred cCCCCC-cHHHHHHHHHHhCcHH----HHH---HHHHHHHHHHHHHHHHHHHCC----CCcc--CcceEEEEeCCCHHHH
Confidence 334543 3446677888888754 443 467888889999999998875 3222 2578877765 3333
Q ss_pred HHHHHHhcceEEcCCC-----ceecccCCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~G-----Rinvagl~~~ni~~va~ai~~v 127 (420)
.+.| .+++|.+..-| ||++.| +....+++.+++.++
T Consensus 290 ~~~l-~~~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~ 330 (339)
T PRK06959 290 HAAL-ARRGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAEC 330 (339)
T ss_pred HHHH-HhCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHH
Confidence 4445 46699885322 777643 345778898888765
No 317
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=88.35 E-value=1.3 Score=45.79 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=29.1
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.+.+|+.|+.+++..+ +.| ||.|++++|.|+.....+
T Consensus 78 v~~~sG~~Ai~~~l~al--~~~-Gd~Vi~~~~~y~~t~~~~ 115 (391)
T TIGR01328 78 VATSSGMGAIAATLLTI--LKA-GDHLISDECLYGCTFALL 115 (391)
T ss_pred EEECCHHHHHHHHHHHH--hCC-CCEEEEecCcchHHHHHH
Confidence 56899999998877544 457 999999999887654443
No 318
>PLN02509 cystathionine beta-lyase
Probab=88.27 E-value=1.6 Score=46.55 Aligned_cols=72 Identities=15% Similarity=0.110 Sum_probs=47.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707 195 LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG 274 (420)
Q Consensus 195 ~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~ 274 (420)
..+.|... |.| .++++.+++-...+ .+.. +.+.||+.++.++..+ +.|
T Consensus 123 ~~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~a----------------------i~~~SG~aAi~~il~l---l~~- 170 (464)
T PLN02509 123 GPYDYTRS-GNP-TRDALESLLAKLDK----ADRA----------------------FCFTSGMAALSAVTHL---IKN- 170 (464)
T ss_pred CCCccCCC-CCH-HHHHHHHHHHHHhC----CCEE----------------------EEeCcHHHHHHHHHHH---hCC-
Confidence 35779876 876 46666666522211 1112 5578899998766543 447
Q ss_pred CCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 275 EKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 275 gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
||.|++++|.|+.+...+ ...|++
T Consensus 171 GD~VI~~~~~y~~t~~ll~~~l~~~G~~ 198 (464)
T PLN02509 171 GEEIVAGDDVYGGSDRLLSQVVPRSGVV 198 (464)
T ss_pred CCEEEEcCCchhhHHHHHHHHHHHCCeE
Confidence 999999999999987444 345654
No 319
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=88.16 E-value=2.5 Score=42.55 Aligned_cols=79 Identities=16% Similarity=0.271 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc---cccccceeec--CCCHHHH-HHHHHhcceEEcCC-----------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCYT--GLNATQV-EKLIKEHSVYLTKD----------- 104 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i---~~Q~GmFs~~--gL~~~qv-~~L~~~~~IY~~~~----------- 104 (420)
.++.+++++..+++.|.+.|++.+. +..+ ..+.++|++. +.+.+++ ++| .+++|++...
T Consensus 272 g~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~ 347 (373)
T cd06453 272 GMEAIAAHEHELTAYALERLSEIPG---VRVYGDAEDRAGVVSFNLEGIHPHDVATIL-DQYGIAVRAGHHCAQPLMRRL 347 (373)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCccccCCeEEEEECCcCHHHHHHHH-HHCCEEeccCccchhHHHHHh
Confidence 3577888888999999999987531 2222 2245677664 4566665 455 5689887432
Q ss_pred ---C--ceecccC-CcCCHHHHHHHH
Q psy16707 105 ---G--RISMAGV-TSKNVGYLAKAI 124 (420)
Q Consensus 105 ---G--Rinvagl-~~~ni~~va~ai 124 (420)
| ||++... +.+++|+++++|
T Consensus 348 ~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 348 GVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1 5555543 447788777763
No 320
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=88.14 E-value=3.9 Score=41.76 Aligned_cols=108 Identities=18% Similarity=0.205 Sum_probs=67.9
Q ss_pred ccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcC-CCCCCcccCCCC-ceEEec--C--C
Q psy16707 305 FYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEG-SNKPWNHITDQI-GMFCYT--G--L 376 (420)
Q Consensus 305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~~g-~~~~w~~i~~q~-GmF~~~--~--l 376 (420)
.+.+||.++.......| +.- .++ ++.+.+|.++.++.+++.|++++ .......-..+. ..+++. + +
T Consensus 224 ~~~Tp~~~~i~al~~al-----~~l-~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~ 297 (349)
T TIGR01364 224 MYNTPPTFAIYVSGLVF-----KWL-KEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEEL 297 (349)
T ss_pred CCCCCcHHHHHHHHHHH-----HHH-HHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhH
Confidence 44688887777665544 211 233 78888999999999999999984 321111000133 334443 2 2
Q ss_pred CHHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 377 NATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 377 ~~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
..++.. .+.+.|+++.++ | |+|+.+- +.++|+.+.++++++.
T Consensus 298 ~~~~~~-~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~ 346 (349)
T TIGR01364 298 EKRFLK-EAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQ 346 (349)
T ss_pred hHHHHH-HHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHH
Confidence 233334 446789977655 2 9997654 6788999999999865
No 321
>KOG0633|consensus
Probab=88.07 E-value=7.9 Score=38.66 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=57.4
Q ss_pred chHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec---CCC----HHHHH
Q psy16707 310 PIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---GLN----ATQVE 382 (420)
Q Consensus 310 p~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~---~l~----~~~v~ 382 (420)
+..|...+...|+|.. .+.++..++.+.+-|..|+++|.+...=++ ++-.-..-|..+ |-+ .....
T Consensus 259 S~~~s~~AL~Als~~n-----~kkme~~rdaiv~er~RL~keLt~v~~~~~--~~gg~daNFiLi~v~~~~n~~akkly~ 331 (375)
T KOG0633|consen 259 SVAGSVAALAALSDSN-----GKKMEDVRDAIVRERERLFKELTEVPFLND--YPGGSDANFILIEVTGGDNGMAKKLYK 331 (375)
T ss_pred cchhHHHHHHhcCccc-----chHHHHHHHHHHHHHHHHHHHhhcCccccC--CCCcccccEEEEEEcCCCcHHHHHHHH
Confidence 4556666666677543 356677889999999999999988653222 111222334432 222 23446
Q ss_pred HHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 383 KLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 383 ~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~ 417 (420)
++..++||.+--- | ||++. -.++| +-+-+-+++
T Consensus 332 q~at~~gVvVRfrgse~~c~G~lRitvG-t~Een-tvL~k~~K~ 373 (375)
T KOG0633|consen 332 QDATKMGVVVRFRGSEEGCKGYLRITVG-TPEEN-TVLMKCLKQ 373 (375)
T ss_pred HHHHhcceEEEEcCCccccceeEEEEcC-Ccccc-hHHHHHHHh
Confidence 6778999988431 3 88864 44444 334444443
No 322
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=87.88 E-value=3.6 Score=41.24 Aligned_cols=92 Identities=16% Similarity=0.225 Sum_probs=59.4
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---CCCHHHH-HHH
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---GLNATQV-EKL 93 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---gL~~~qv-~~L 93 (420)
.+..+..++...|.+. .| ++.++++++..|..|.+.|. |. +..+.|+|.+. +.+.+++ ++|
T Consensus 254 ~~~~~~~~a~~~l~~~----~~---~~~~~~~~~~~r~~l~~~l~-------~~-~~~~~~~~i~~~~~~~~~~~~~~~l 318 (361)
T PRK00950 254 LTRLSQAAAIAALSDK----EY---IEKSIEHGIKSREYLYNELP-------FK-VYPSEANFVLVDVTPMTAKEFCEEL 318 (361)
T ss_pred CCHHHHHHHHHHhcCH----HH---HHHHHHHHHHHHHHHHhhcC-------ee-ECCCcceEEEEECCCCCHHHHHHHH
Confidence 3445666677777752 34 44567788888888888774 22 23455777665 3445554 455
Q ss_pred HHhcceEEcC------CC----ceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTK------DG----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~------~G----Rinvagl~~~ni~~va~ai~~v 127 (420)
.+++|++.+ .| ||+++ +...++++.++|.++
T Consensus 319 -~~~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~i 359 (361)
T PRK00950 319 -LKRGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEI 359 (361)
T ss_pred -HHCCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHH
Confidence 467998853 11 67776 667899999998765
No 323
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=87.69 E-value=1.1 Score=46.23 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=29.7
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
+.+.||++|+.+++..+ +.| ||.|++++|+|+.+..
T Consensus 70 ~~~~gg~~Ai~~~l~al--l~~-GD~Vl~~~p~y~~~~~ 105 (382)
T TIGR02080 70 VVTNTGMSAIHLVTTAL--LGP-DDLLVAPHDCYGGTYR 105 (382)
T ss_pred EEEcCHHHHHHHHHHHH--cCC-CCEEEEcCCCcHHHHH
Confidence 67999999999988644 457 9999999999996443
No 324
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=87.64 E-value=4.4 Score=41.44 Aligned_cols=107 Identities=16% Similarity=0.209 Sum_probs=67.2
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cc---cccccceeec-CCC
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLT--EVKGMADRIISMRQSLKDNLQKEGSNKPWN-HI---TDQIGMFCYT-GLN 86 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~--el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~-~i---~~Q~GmFs~~-gL~ 86 (420)
.+.+||.++-.-...-|. ...+ .++.+.+|.+.+.+.|++.|.+.+.-.-+. .- ....+-|+|. |++
T Consensus 234 t~~tp~i~~i~~l~~al~------~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~ 307 (361)
T TIGR01366 234 TYNTPAIATLALLAEQID------WMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDID 307 (361)
T ss_pred CCCCchHHHHHHHHHHHH------HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccC
Confidence 356777774333332222 1122 266777999999999999998776321121 00 1112556764 578
Q ss_pred HHHH-HHHHHhcceEEcCC--------CceecccC-CcCCHHHHHHHHHhh
Q psy16707 87 ATQV-EKLIKEHSVYLTKD--------GRISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 87 ~~qv-~~L~~~~~IY~~~~--------GRinvagl-~~~ni~~va~ai~~v 127 (420)
++++ +.| ++++|.+... =||++.|- +.++|+++++||.++
T Consensus 308 ~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~ 357 (361)
T TIGR01366 308 AATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWV 357 (361)
T ss_pred HHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 8888 567 5569887543 37887774 458999999999886
No 325
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=87.60 E-value=5.9 Score=39.77 Aligned_cols=96 Identities=10% Similarity=0.094 Sum_probs=66.0
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKL 93 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L 93 (420)
+++..+-.++...|++. .|.++ +++.++..|+.+.+.|++.+ |..+ ...|+|.+.-+. .+-.+.|
T Consensus 252 ~~~~~~q~~~~~~l~~~----~~~~~---~~~~~~~~~~~~~~~l~~~~----~~~~-~~~g~~i~~~~~~~~~~~~~~l 319 (359)
T PRK03158 252 NTTRIAQYAAIAALEDQ----AFLKE---CVEKNAEGLEQYYAFCKEYG----LFYY-PSQTNFIFVDTGRDANELFEAL 319 (359)
T ss_pred CCCHHHHHHHHHHhcCH----HHHHH---HHHHHHHHHHHHHHHHHHCC----CeeC-CCcCcEEEEECCCCHHHHHHHH
Confidence 45666778888888763 46554 45567777888888888763 3333 456888888653 3445566
Q ss_pred HHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
. +++|.+.+. | ||+++ ++..++++.+||.++
T Consensus 320 ~-~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 320 L-KKGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred H-HCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 5 579988763 2 66666 678899999998764
No 326
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=87.47 E-value=1.6 Score=44.56 Aligned_cols=63 Identities=14% Similarity=0.114 Sum_probs=44.9
Q ss_pred CCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707 196 DKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP 273 (420)
Q Consensus 196 ~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p 273 (420)
.+.|. +..-..+|.++++++. |.. .. +.+.+|+.|+..++..+ +.|
T Consensus 31 ~~~y~r~~~p~~~~le~~la~l~-g~~-------~a----------------------~~~~sG~~Ai~~~l~~l--~~~ 78 (369)
T cd00614 31 GYIYSRIGNPTVDALEKKLAALE-GGE-------AA----------------------LAFSSGMAAISTVLLAL--LKA 78 (369)
T ss_pred CceeECCCChhHHHHHHHHHHHH-CCC-------CE----------------------EEEcCHHHHHHHHHHHH--cCC
Confidence 34555 4455678888888865 422 11 56889999999988654 447
Q ss_pred CCCEEEEcCCCCCCcHHH
Q psy16707 274 GEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 274 ~gd~VlvpdP~w~ny~~i 291 (420)
||.|++++|+|+.....
T Consensus 79 -gd~Vl~~~~~y~~~~~~ 95 (369)
T cd00614 79 -GDHVVASDDLYGGTYRL 95 (369)
T ss_pred -CCEEEECCCCcchHHHH
Confidence 99999999999875543
No 327
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=87.34 E-value=1.4 Score=46.04 Aligned_cols=33 Identities=24% Similarity=0.473 Sum_probs=27.4
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN 287 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n 287 (420)
+.+.+|+.|+.+++..+ +.| ||.|++++|+|+.
T Consensus 79 v~~~sG~~Ai~~~l~al--l~p-GD~Vvv~~p~Y~~ 111 (405)
T PRK08776 79 VITATGMGAINLVLNAL--LQP-GDTLVVPHDAYGG 111 (405)
T ss_pred EEEcCHHHHHHHHHHHH--hCC-CCEEEEccCCchH
Confidence 56788899998887644 457 9999999999987
No 328
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=87.21 E-value=7.2 Score=39.92 Aligned_cols=75 Identities=11% Similarity=0.083 Sum_probs=49.4
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHH-HHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQV-EKL 93 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~qv-~~L 93 (420)
+++.....++...+.++ +.++..+++++..|..+.+.|++. +....-+.|+|.+.-++ ..++ +.|
T Consensus 277 ~~~~~~q~a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~l 344 (396)
T PRK09147 277 AMPPAVQAASIAAWNDE-------AHVRENRALYREKFDAVTPILAPV-----LDVQLPDAGFYLWAKVPGDDTEFARRL 344 (396)
T ss_pred CCCHHHHHHHHHHhcch-------hHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCCeeEEEEEECCCCHHHHHHHH
Confidence 34444444444555432 346667888888899999888763 33345688999998764 4444 667
Q ss_pred HHhcceEEcC
Q psy16707 94 IKEHSVYLTK 103 (420)
Q Consensus 94 ~~~~~IY~~~ 103 (420)
.++++|.+.+
T Consensus 345 l~~~gv~v~p 354 (396)
T PRK09147 345 YADYNVTVLP 354 (396)
T ss_pred HHhCCEEEeC
Confidence 7788998854
No 329
>PLN02624 ornithine-delta-aminotransferase
Probab=87.02 E-value=3.1 Score=44.31 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCeEEeCCC----cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707 379 TQVEKLIKEHSVYLTKDG----RISM-AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 379 ~~v~~Ll~e~~Vy~~p~g----Ris~-agl~~~ni~~la~AI~~vv 419 (420)
+.++.| .+.||++.|.+ ||+. ..++.++|+++.+++.+++
T Consensus 398 ~~~~~L-~e~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l 442 (474)
T PLN02624 398 DVCLKL-KERGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVL 442 (474)
T ss_pred HHHHHH-HhCCeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 344555 68999999864 6764 3488999999999998875
No 330
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=86.92 E-value=4.5 Score=41.57 Aligned_cols=83 Identities=12% Similarity=0.182 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--ccccceeec--CCCHHHHHHHHHhcceEEcC--------------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCYT--GLNATQVEKLIKEHSVYLTK-------------- 103 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~-------------- 103 (420)
.++.+++|+..+++.|.+.|.+... +.-+. ...|+++|. +.+++++...-++++|.+..
T Consensus 298 g~~~i~~~~~~l~~~l~~~l~~~~~---~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~ 374 (406)
T PRK09295 298 GLNNIAEYEQNLMHYALSQLESVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNV 374 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCC
Confidence 4678899999999999999976421 11111 235787764 66777776555788987732
Q ss_pred --CCceecccCCc-CCHHHHHHHHHhh
Q psy16707 104 --DGRISMAGVTS-KNVGYLAKAIHAN 127 (420)
Q Consensus 104 --~GRinvagl~~-~ni~~va~ai~~v 127 (420)
.-|||+.-.|+ ++||+++++|.++
T Consensus 375 ~~~iRiS~~~ynt~~did~l~~~l~~i 401 (406)
T PRK09295 375 PAMCRASLAMYNTHEEVDRLVAGLQRI 401 (406)
T ss_pred CCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 25777776666 7899999999876
No 331
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=86.81 E-value=2.7 Score=44.24 Aligned_cols=87 Identities=20% Similarity=0.329 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCccccccccce--eecCCCHHHHHHHHHhcceEEcCC----------
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGS----NKPWNHITDQIGMF--CYTGLNATQVEKLIKEHSVYLTKD---------- 104 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~----~~~w~~i~~Q~GmF--s~~gL~~~qv~~L~~~~~IY~~~~---------- 104 (420)
.+.+.+++++..+++.|.+.|.+.|. +++- .+.+.. ...|.+.+++..+-++++|++..+
T Consensus 299 ~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~----~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~ 374 (452)
T PTZ00094 299 PEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTD----NHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALN 374 (452)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCC----CceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCC
Confidence 45677889999999999999977542 1111 123443 445788888887778899999643
Q ss_pred ---Cceec-----ccCCcCCHHHHHHHHHhhCCCc
Q psy16707 105 ---GRISM-----AGVTSKNVGYLAKAIHANGSLP 131 (420)
Q Consensus 105 ---GRinv-----agl~~~ni~~va~ai~~v~~~p 131 (420)
=|++. .|++.+.|++++++|.++-.++
T Consensus 375 ~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 375 PSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred CCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 45555 3555799999999998875554
No 332
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=86.11 E-value=6.2 Score=41.89 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=76.0
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.+...-....-.+|.+--.++++-|.+- .|.+-++.||...+.-|..+.+.|++... +......-..|||-.+-|
T Consensus 319 ~~~~~k~~~~~~~s~~~Q~~la~~l~~G----~~~~hl~~lR~~y~~rr~~l~~~L~~~~~-~~~~~~~p~gG~flwl~l 393 (459)
T COG1167 319 KLLRLKQAADLGPSSLSQAALAAFLLSG----HYDRHLRRLRREYARRRDALLEALAEYLP-ELATWTRPEGGLFLWLEL 393 (459)
T ss_pred HHHHHHHHhcCCCChHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeeeecCCceEEEEEEc
Confidence 3444444455566666645555555543 57788899999999999999999998776 222233345589999966
Q ss_pred CH----HHHHHHHHhcceEEcC-------C------CceecccCCcCCHHHHHHHHHhh
Q psy16707 86 NA----TQVEKLIKEHSVYLTK-------D------GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~----~qv~~L~~~~~IY~~~-------~------GRinvagl~~~ni~~va~ai~~v 127 (420)
.+ ..+...-.+++|-+.+ + =|+|+++.+...++.-.+.|.++
T Consensus 394 ~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~ 452 (459)
T COG1167 394 PEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAAL 452 (459)
T ss_pred CCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 55 3444444455555544 2 27888888877777666655544
No 333
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=86.03 E-value=5.8 Score=39.96 Aligned_cols=97 Identities=18% Similarity=0.182 Sum_probs=59.0
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHHHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIK 95 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~qv~~L~~ 95 (420)
+++...-.++..+|.++ | +++..+.+...|..|.+.|++. +| |.. ..+.|+|-+.-+. .+++..+-.
T Consensus 243 ~~~~~~q~~~~~~l~~~-----~---~~~~~~~~~~~r~~l~~~l~~~--~g-~~~-~~~~~~~~~i~~~~~~~~~~~l~ 310 (351)
T PRK14807 243 NINSLSQVIALKVLRTG-----V---LKERVNYILNERERLIKELSKI--PG-IKV-YPSKTNFILVKFKDADYVYQGLL 310 (351)
T ss_pred CcCHHHHHHHHHHHhHH-----H---HHHHHHHHHHHHHHHHHHHHhC--CC-cEE-CcCCccEEEEEcCCHHHHHHHHH
Confidence 34455566777777643 2 2223334556677788888653 33 553 4567888877663 444443334
Q ss_pred hcceEEcCC-------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 96 EHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 96 ~~~IY~~~~-------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+++|.+..- + ||+++ ++...+++.++|.++
T Consensus 311 ~~gV~v~~~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 311 ERGILVRDFSKVEGLEGALRITVS--SCEANDYLINGLKEL 349 (351)
T ss_pred HCCEEEEECCCCCCCCCeEEEEcC--CHHHHHHHHHHHHHh
Confidence 678988431 1 67765 456788999998764
No 334
>PLN02187 rooty/superroot1
Probab=86.03 E-value=4.4 Score=42.92 Aligned_cols=98 Identities=12% Similarity=0.082 Sum_probs=60.7
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---------CH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---------NA 87 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---------~~ 87 (420)
+|+...-..+..+|.+.. ..|. +.+++.++..|+.+++.|++.+ +......-+.|||.+..+ +.
T Consensus 315 ~~s~~~Q~a~~~~L~~~~--~~~l---~~~~~~l~~~r~~l~~~L~~~~--~~~~~~~P~gg~fl~~~l~~~~~~~~~~~ 387 (462)
T PLN02187 315 DPATIIQAALPAILEKAD--KNFF---AKKNKILKHNVDLVCDRLKDIP--CVVCPKKPESCTYLLTKLELSLMDNIKDD 387 (462)
T ss_pred CCCHHHHHHHHHHHhcCc--HHHH---HHHHHHHHHHHHHHHHHHhhCC--CCcCCCCCCEeEEEEeecChhhCCCCCCH
Confidence 456777788888887521 3454 4556778888999999998642 211112346789999844 23
Q ss_pred -HHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHH
Q psy16707 88 -TQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAK 122 (420)
Q Consensus 88 -~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ 122 (420)
+.+..|-++.+|.+.+.. |||++. ...+++.-.+
T Consensus 388 ~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~ 430 (462)
T PLN02187 388 IDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALE 430 (462)
T ss_pred HHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHH
Confidence 445677778899877532 677753 3444333333
No 335
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=85.85 E-value=4 Score=42.56 Aligned_cols=83 Identities=16% Similarity=0.145 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----C--HHHHHHHHHhCCeEEeCCC----cEEE-cccCC
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----N--ATQVEKLIKEHSVYLTKDG----RISM-AGVTS 405 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~--~~~v~~Ll~e~~Vy~~p~g----Ris~-agl~~ 405 (420)
+.++.+++-+.|.+.|+++....++.......|++.-+-+ . ...+...+.+.||++.|.| |+.. ..+++
T Consensus 308 l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~ 387 (408)
T PRK04612 308 IAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTD 387 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCH
Confidence 3455666666666666654322122223455676664322 1 2334344578999998865 4442 14788
Q ss_pred CCHHHHHHHHHHHh
Q psy16707 406 KNVGYLAKAIHAVT 419 (420)
Q Consensus 406 ~ni~~la~AI~~vv 419 (420)
+.|+.+.+++.+++
T Consensus 388 eeid~~l~~l~~~l 401 (408)
T PRK04612 388 AELADGLARLRLAL 401 (408)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988875
No 336
>PRK05968 hypothetical protein; Provisional
Probab=85.80 E-value=3.1 Score=43.01 Aligned_cols=44 Identities=18% Similarity=0.180 Sum_probs=31.2
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH----HHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI----PICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~----~i~~~aG~~ 298 (420)
+.+.+|+.|+.++...+ +.| ||+|++++|+|+.-. ..++..|++
T Consensus 82 v~~~sG~~Ai~~al~al--~~~-Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 129 (389)
T PRK05968 82 RGFASGMAAISSTVLSF--VEP-GDRIVAVRHVYPDAFRLFETILKRMGVE 129 (389)
T ss_pred EEECCHHHHHHHHHHHH--hCC-CCEEEEeCCCchHHHHHHHHHHHHcCce
Confidence 45788999998776533 457 999999999998633 344445654
No 337
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=85.78 E-value=6.3 Score=40.26 Aligned_cols=82 Identities=18% Similarity=0.333 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cccccceee--cCCCHHHHHHHHHhcceEEcC--------------CC
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCY--TGLNATQVEKLIKEHSVYLTK--------------DG 105 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-~~Q~GmFs~--~gL~~~qv~~L~~~~~IY~~~--------------~G 105 (420)
++.+++|+..+++.|.+.|+++.. +.-. ..+.+++++ .|.+.+++...-++++|.+.. .|
T Consensus 291 ~~~i~~~~~~l~~~l~~~l~~l~g---~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~ 367 (398)
T TIGR03392 291 IAAAEAWSVSLADLAEERLAQLPG---FRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSG 367 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCC
Confidence 457889999999999999876521 1111 124567764 367766665444678998753 22
Q ss_pred --ceecccC-CcCCHHHHHHHHHhh
Q psy16707 106 --RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 --Rinvagl-~~~ni~~va~ai~~v 127 (420)
||++... +.++|++++++|.++
T Consensus 368 ~iRvS~~~~~t~~ei~~l~~~l~~~ 392 (398)
T TIGR03392 368 TLRASFAPYNTQQDVDALVDAVGAA 392 (398)
T ss_pred EEEEEeeccCCHHHHHHHHHHHHHH
Confidence 5666654 458899999998775
No 338
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=85.67 E-value=28 Score=36.98 Aligned_cols=76 Identities=20% Similarity=0.191 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--cCC---C------------HHHHHHHHHhCCeEEeCCC----c
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGL---N------------ATQVEKLIKEHSVYLTKDG----R 397 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--~~l---~------------~~~v~~Ll~e~~Vy~~p~g----R 397 (420)
..=.+.++.+.+.+++.|.+ | ++....+||.+ +.. + ..+...| -+.|||+.|+. =
T Consensus 330 ~~~~~L~~gl~~~~~~~g~~--~-~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~-l~~GV~l~ps~~ea~f 405 (432)
T COG0001 330 ALGERLAEGLRAAAERHGIP--L-TVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHL-LNRGVYLAPSQFEAGF 405 (432)
T ss_pred HHHHHHHHHHHHHHHHhCCC--e-EEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHH-HhCCcccCCcccccee
Confidence 44444556777777778865 3 36677889884 331 1 1233444 58899999984 4
Q ss_pred EEEcccCCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl~~~ni~~la~AI~~vv 419 (420)
+|.+ -++++|++..+|+.+++
T Consensus 406 lS~a-hte~di~~~~~a~~~~~ 426 (432)
T COG0001 406 LSTA-HTEEDIDRTLEAADEAF 426 (432)
T ss_pred eecc-cCHHHHHHHHHHHHHHH
Confidence 4544 68899999999998775
No 339
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=85.66 E-value=1.7 Score=45.24 Aligned_cols=44 Identities=14% Similarity=0.064 Sum_probs=31.0
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCC----CCcHHHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTW----GNHIPICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w----~ny~~i~~~aG~~ 298 (420)
+.+.+|+.|+..++..+ +.| ||.|++++..| ..+...++..|++
T Consensus 89 l~~~sG~~Ai~~~l~al--l~~-Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~ 136 (403)
T PRK07810 89 FATASGMSAVFTALGAL--LGA-GDRLVAARSLFGSCFVVCNEILPRWGVE 136 (403)
T ss_pred EEECChHHHHHHHHHHH--hCC-CCEEEEccCCcchHHHHHHHHHHHcCcE
Confidence 67999999998876433 457 99999998555 3344455556664
No 340
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=85.62 E-value=2.8 Score=43.14 Aligned_cols=34 Identities=12% Similarity=0.244 Sum_probs=27.5
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+.+.||+.|+..++..+ +.| ||.|+++++.|+..
T Consensus 73 ~~~~sG~~Ai~~al~al--~~~-Gd~Vl~~~~~~~~t 106 (380)
T TIGR01325 73 VATATGMSAIQAALMTL--LQA-GDHVVASRSLFGST 106 (380)
T ss_pred EEECCHHHHHHHHHHHH--hCC-CCEEEEecCCcchH
Confidence 56899999999887544 457 99999999998763
No 341
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=85.50 E-value=3.7 Score=42.94 Aligned_cols=81 Identities=7% Similarity=0.145 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC-CcccCCCCceEEecCCCH----HHHHHHHHhCCeEEeCCC----cEEEc-c--cCCC
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKP-WNHITDQIGMFCYTGLNA----TQVEKLIKEHSVYLTKDG----RISMA-G--VTSK 406 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~-w~~i~~q~GmF~~~~l~~----~~v~~Ll~e~~Vy~~p~g----Ris~a-g--l~~~ 406 (420)
++++++++.|.+.|+++....+ +..-....|++.++.+++ ..+...+.+.||++.+.+ ||.++ . ++.+
T Consensus 322 ~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 401 (425)
T PRK09264 322 KEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEE 401 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHH
Confidence 4555555555555544311111 111134567887765532 233333457899998743 77776 4 5788
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
+|+++.+++.+++
T Consensus 402 ei~~~~~~l~~~l 414 (425)
T PRK09264 402 ELEEGLDILEEAV 414 (425)
T ss_pred HHHHHHHHHHHHH
Confidence 8999998888775
No 342
>PLN02822 serine palmitoyltransferase
Probab=85.49 E-value=3.9 Score=43.62 Aligned_cols=81 Identities=12% Similarity=0.172 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------------HHHHHHHHHhcceEEcCC------
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------------ATQVEKLIKEHSVYLTKD------ 104 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------------~~qv~~L~~~~~IY~~~~------ 104 (420)
..++++++++++.|.+.|++.. .|.......+.+.++-+. .+-+++|-++++|++++.
T Consensus 367 ~~~~~~l~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~ 443 (481)
T PLN02822 367 PSVLAKLKENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLD 443 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcC
Confidence 3566677777777777776542 133333344555544342 234677777889999853
Q ss_pred -------Cceecc-cCCcCCHHHHHHHHHhh
Q psy16707 105 -------GRISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 -------GRinva-gl~~~ni~~va~ai~~v 127 (420)
-||+++ +.++++|+..+++|.++
T Consensus 444 ~~~~~~~lRi~is~~~t~edI~~~~~~l~~~ 474 (481)
T PLN02822 444 KCRLPVGIRLFVSAGHTESDILKASESLKRV 474 (481)
T ss_pred CCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 456654 57889999999999876
No 343
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=85.46 E-value=7.4 Score=39.82 Aligned_cols=108 Identities=16% Similarity=0.124 Sum_probs=68.2
Q ss_pred ccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC-ceEEec--CC-C-
Q psy16707 305 FYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI-GMFCYT--GL-N- 377 (420)
Q Consensus 305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~-GmF~~~--~l-~- 377 (420)
.+.+||.++.......|. .- .++ ++.+.+|.++..+.+++.|+++|.-.....-..++ +..++. +. .
T Consensus 235 ~~~Tp~~~~i~aL~~aL~-----~i-~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~ 308 (360)
T PRK05355 235 MYNTPPTFAIYLAGLVFK-----WL-KEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELD 308 (360)
T ss_pred ccCCCcHHHHHHHHHHHH-----HH-HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHH
Confidence 457888888876665442 11 232 77888999999999999999988311111001133 335543 21 1
Q ss_pred HHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 378 ATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 378 ~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
.+....+ .+.|+++.++ | |||+..- +.++|++|.+++++++
T Consensus 309 ~~~~~~~-~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~ 356 (360)
T PRK05355 309 KKFLAEA-KAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFE 356 (360)
T ss_pred HHHHHHH-HHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 2333444 5678887544 3 9997654 5788999999999875
No 344
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=85.43 E-value=4.1 Score=40.31 Aligned_cols=81 Identities=19% Similarity=0.195 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc---ccccceeecC------CCHHHHHHHHHhcceEEcCCC-------c
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT---DQIGMFCYTG------LNATQVEKLIKEHSVYLTKDG-------R 106 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~---~Q~GmFs~~g------L~~~qv~~L~~~~~IY~~~~G-------R 106 (420)
++...+|++..|+.+.+.|++.+ |..+. ...|++...- .+.+++...-.+.+|.+.+.+ |
T Consensus 257 ~~~~~~~~~~~~~~~~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iR 332 (355)
T TIGR03301 257 VPARIARYRRNRELLVDGLRALG----FQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFR 332 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEE
Confidence 66677788889999999998764 33222 2356554322 233344433356688886543 7
Q ss_pred eec-ccCCcCCHHHHHHHHHhh
Q psy16707 107 ISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 107 inv-agl~~~ni~~va~ai~~v 127 (420)
|++ ...+.++++.++++|.++
T Consensus 333 is~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 333 IGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred EecCCCCCHHHHHHHHHHHHhh
Confidence 776 445779999999998764
No 345
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=85.42 E-value=1.8 Score=45.84 Aligned_cols=44 Identities=11% Similarity=0.299 Sum_probs=33.8
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~ 298 (420)
+.+.||+.|+.+++..+ +.| ||.|++|.++|..-... +...|++
T Consensus 80 v~~~SG~aAi~~al~al--l~~-GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~ 127 (432)
T PRK06702 80 VATASGQAAIMLAVLNI--CSS-GDHLLCSSTVYGGTFNLFGVSLRKLGID 127 (432)
T ss_pred EEECCHHHHHHHHHHHh--cCC-CCEEEECCCchHHHHHHHHHHHHHCCCE
Confidence 67999999999888533 457 99999999999855544 4556665
No 346
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=85.41 E-value=2.5 Score=44.51 Aligned_cols=84 Identities=13% Similarity=0.135 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--------CHHHHHHH---HHhCCeEEeCCC------cE
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--------NATQVEKL---IKEHSVYLTKDG------RI 398 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--------~~~~v~~L---l~e~~Vy~~p~g------Ri 398 (420)
.+.++++++.+.|.+.|+++....++..-....|+|..+-+ +.+....+ +.+.||++.+++ ||
T Consensus 339 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~ 418 (443)
T PRK06058 339 DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRL 418 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEE
Confidence 34567777777888888765321112111345566653211 12222222 247899998753 45
Q ss_pred --EEcccCCCCHHHHHHHHHHHhC
Q psy16707 399 --SMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 399 --s~agl~~~ni~~la~AI~~vv~ 420 (420)
+++ +++++|+++.+++.++++
T Consensus 419 ~Ppl~-~t~~~i~~~~~~l~~~l~ 441 (443)
T PRK06058 419 LPPLV-IGDELLREGLDVLEAALA 441 (443)
T ss_pred ECCCc-cCHHHHHHHHHHHHHHHH
Confidence 354 899999999999998863
No 347
>PRK04311 selenocysteine synthase; Provisional
Probab=85.32 E-value=3.5 Score=44.04 Aligned_cols=92 Identities=14% Similarity=0.094 Sum_probs=61.5
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC---C--CHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII---G--APDFGKLAAQLAYGEDCPQLKDNLISIVQG 234 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~---G--~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~ 234 (420)
..+||++=-.|.++-|..+.++.|.+|...+.....+.+|.... | ...+.+.++++. |.. . +
T Consensus 79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~-Gae-------~--a--- 145 (464)
T PRK04311 79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT-GAE-------D--A--- 145 (464)
T ss_pred cceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh-CCC-------e--E---
Confidence 35688775567788888888899998887776432233443221 2 257777777754 432 1 1
Q ss_pred cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCC
Q psy16707 235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTW 285 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w 285 (420)
+.+.+|+.|+.+++..+ .+ ||+|++++..+
T Consensus 146 -----------------~vv~sgtaAl~l~l~~l---~~-GdeVIvs~~e~ 175 (464)
T PRK04311 146 -----------------LVVNNNAAAVLLALNAL---AA-GKEVIVSRGEL 175 (464)
T ss_pred -----------------EEECCHHHHHHHHHHHh---CC-CCEEEEcchhh
Confidence 56888999998877544 36 89999998643
No 348
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=85.24 E-value=4.4 Score=40.52 Aligned_cols=91 Identities=16% Similarity=0.241 Sum_probs=59.5
Q ss_pred chHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH--HHHHHHHHhc
Q psy16707 20 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA--TQVEKLIKEH 97 (420)
Q Consensus 20 ~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~--~qv~~L~~~~ 97 (420)
..+..++..+|.++ +|.+ .++++++..|+.|.+.|++.+. . .+..+.|+|.++.+.. +=.++|. ++
T Consensus 227 ~~~q~~~~~~l~~~----~~~~---~~~~~~~~~~~~l~~~L~~~~~---~-~~~~~~~~f~~~~~~~~~~l~~~l~-~~ 294 (330)
T TIGR01140 227 GPARAAGRAALADT----AWQA---ATRARLAAERARLAALLARLGG---L-EVVGGTALFLLVRTPDAAALHEALA-RR 294 (330)
T ss_pred HHHHHHHHHHHhch----HHHH---HHHHHHHHHHHHHHHHHHhCCC---c-eECCCCCeEEEEEcCCHHHHHHHHH-HC
Confidence 34677888888864 4654 4678999999999999987642 2 2345678998877633 3355665 57
Q ss_pred ceEEcCCC----------ceecccCCcCCHHHHHHHH
Q psy16707 98 SVYLTKDG----------RISMAGVTSKNVGYLAKAI 124 (420)
Q Consensus 98 ~IY~~~~G----------Rinvagl~~~ni~~va~ai 124 (420)
+|++.+.. ||+++.-+ .+ +++..++
T Consensus 295 gi~v~pg~~f~~~~~~~iRi~~~~~~-~~-~~~~~~l 329 (330)
T TIGR01140 295 GILIRDFDNFPGLDPRYLRFALPTDE-EN-DRLEEAL 329 (330)
T ss_pred CEEEEECCCCCCCCCCEEEEEecCHH-HH-HHHHHhh
Confidence 99987632 45555432 33 6666654
No 349
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=85.09 E-value=2.7 Score=44.38 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=30.1
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.|.+||.|+.+++..+ +.+ ||.|++++..|+.....+
T Consensus 83 v~~sSGt~Al~~al~~l--l~~-Gd~Vi~~~~~y~~t~~~~ 120 (433)
T PRK08134 83 IATASGQAALHLAIATL--MGA-GSHIVASSALYGGSHNLL 120 (433)
T ss_pred EEeCCHHHHHHHHHHHH--hCC-CCEEEEeCCccHHHHHHH
Confidence 56999999999887644 457 999999999998654443
No 350
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=85.03 E-value=4.7 Score=40.37 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cccccccceeecCCCHHHH-HHHHHhcceEEcCC-----Cceecc
Q psy16707 38 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLNATQV-EKLIKEHSVYLTKD-----GRISMA 110 (420)
Q Consensus 38 ~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~-~i~~Q~GmFs~~gL~~~qv-~~L~~~~~IY~~~~-----GRinva 110 (420)
...+.++++++++..+++.|.+.|++.+ +. .+..+.+|+++.--+.+++ +.|.+ .+|++..- =||++.
T Consensus 276 l~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~v~~~~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~ 350 (371)
T PRK13520 276 LGREGYRKVVERCMENTRWLAEELKERG----FEPVIEPVLNIVAFDDPNPDEVREKLRE-RGWRVSVTRCPEALRIVCM 350 (371)
T ss_pred hcHhHHHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCceEEEEecCCHHHHHHHHHH-CCceeccCCCCCEEEEEEE
Confidence 3445677888999999999999998763 33 3345677877753355554 45654 48877542 256654
Q ss_pred c-CCcCCHHHHHHHHHhh
Q psy16707 111 G-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 111 g-l~~~ni~~va~ai~~v 127 (420)
+ .+...|+++++++.++
T Consensus 351 ~~~t~edi~~~~~~l~~~ 368 (371)
T PRK13520 351 PHVTREHIENFLEDLKEV 368 (371)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 4 3668999999998775
No 351
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=85.01 E-value=3.7 Score=41.87 Aligned_cols=81 Identities=14% Similarity=0.232 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCC-ccccccccceeecCCCH------------HH-HHHHHHhcceEEcCC----Cc
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPW-NHITDQIGMFCYTGLNA------------TQ-VEKLIKEHSVYLTKD----GR 106 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w-~~i~~Q~GmFs~~gL~~------------~q-v~~L~~~~~IY~~~~----GR 106 (420)
.+.+++..+++.|.+.|++......+ ..+ ...|+|..+-+.+ .+ .+.| .+++|++.+. .|
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~~~~lR 390 (413)
T cd00610 313 GLLENAAELGEYLRERLRELAEKHPLVGDV-RGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSGGNVIR 390 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCcEEEe-ecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecCCCEEE
Confidence 45566677777777777654332111 112 3445554443322 22 3344 4669999765 37
Q ss_pred eecccC-CcCCHHHHHHHHHhh
Q psy16707 107 ISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 107 invagl-~~~ni~~va~ai~~v 127 (420)
++++.. ++.+|+.+.++|.++
T Consensus 391 ~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 391 LLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred EECCCcCCHHHHHHHHHHHHHh
Confidence 777664 678999999998764
No 352
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=84.96 E-value=5.4 Score=40.02 Aligned_cols=91 Identities=21% Similarity=0.265 Sum_probs=59.5
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHh
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKE 96 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~ 96 (420)
+++.....++..+|++++...+|. .++...|..|.+.|.+.. ....|+|.+.-+. -.+.|.+
T Consensus 234 ~~~~~~q~~~~~~l~~~~~~~~~~-------~~~~~~r~~l~~~L~~~~--------~~~~~~~~~~~~~--~~~~l~~- 295 (337)
T PRK03967 234 SLNILTMKIVRLALDHYDLIEERI-------DYIIKERERVRRELGEYA--------YPSDANFLLLKLD--AYDYLLE- 295 (337)
T ss_pred CCCHHHHHHHHHHHhCHHHHHHHH-------HHHHHHHHHHHHHhccCc--------CCCCCcEEEEhHH--HHHHHHH-
Confidence 557888999999998865444443 344455667777776542 2356777776653 4566764
Q ss_pred cceEEcCC-----C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 97 HSVYLTKD-----G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 97 ~~IY~~~~-----G--Rinvagl~~~ni~~va~ai~~v 127 (420)
++|.+..- + ||+++ ++.+.+.+.++|..+
T Consensus 296 ~gi~v~~~~~~~~~~~Ri~~~--~~~~~~~l~~~l~~~ 331 (337)
T PRK03967 296 NGIVVRKLSGRLEGHIRVTVG--KREENDEFIKALKEI 331 (337)
T ss_pred CCEEEEeCCCCCCCeEEEecC--CHHHHHHHHHHHHHH
Confidence 58888421 1 66665 346778888888765
No 353
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=84.81 E-value=5.3 Score=40.97 Aligned_cols=84 Identities=17% Similarity=0.110 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cccc-cceeec--C----CCHHHHHHHHHhcceEEcC--------CCc
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQI-GMFCYT--G----LNATQVEKLIKEHSVYLTK--------DGR 106 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-~~Q~-GmFs~~--g----L~~~qv~~L~~~~~IY~~~--------~GR 106 (420)
++.+.+|.+.+.+.|++.|++.+.-.-+..- ..+. +++++- + .+.+.+..|.++ +|++.. .=|
T Consensus 270 ~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vR 348 (378)
T PRK03080 270 LDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRDAPNGLR 348 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccCCCCcEE
Confidence 6888999999999999999876521111100 1122 477763 3 455667777655 566532 237
Q ss_pred eecccCCc-CCHHHHHHHHHhh
Q psy16707 107 ISMAGVTS-KNVGYLAKAIHAN 127 (420)
Q Consensus 107 invagl~~-~ni~~va~ai~~v 127 (420)
|++-+.|+ ++|++++++|.++
T Consensus 349 is~~~~~t~~di~~l~~al~~~ 370 (378)
T PRK03080 349 IWCGPTVEPADVEALTPWLDWA 370 (378)
T ss_pred EecCCCCCHHHHHHHHHHHHHH
Confidence 77666554 8999999999875
No 354
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=84.53 E-value=8.5 Score=40.26 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=65.5
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-ccccccceeecCCC------
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTGLN------ 86 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~-i~~Q~GmFs~~gL~------ 86 (420)
...+||......+..+|.+.. .+-++.++++++.-|..+++.|++. ++ +.. ..-+-|||-+..+.
T Consensus 298 ~~~~~~~~~Q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~--~g-~~~~~~P~ga~y~~v~l~~~~~~~ 369 (430)
T PLN00145 298 ISTDPATFVQGAIPQIIANTK-----EEFFTKTLGLLKETADICYEKIKEI--KC-ITCPHKPEGSMFVMVKLDLSCLSG 369 (430)
T ss_pred ccCCCCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHHHHhcC--CC-CCCCcCCCeeeEEEeccChhhcCC
Confidence 344455555566667776421 2345667788888899999999764 22 332 24688999997663
Q ss_pred ----HHHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707 87 ----ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 87 ----~~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v 127 (420)
.+-+++|.++++|.+.+.. ||+++ . ..+.+.+++..+
T Consensus 370 ~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~-~---~~~~l~~al~rl 418 (430)
T PLN00145 370 IKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA-I---DPPSLEDGLERL 418 (430)
T ss_pred CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC-C---CHHHHHHHHHHH
Confidence 2356678889999887642 66765 2 356666665543
No 355
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=84.48 E-value=6.4 Score=40.53 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=62.3
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCccc-----cccccceeecC-CCH
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHI-----TDQIGMFCYTG-LNA 87 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~-~~~~~w~~i-----~~Q~GmFs~~g-L~~ 87 (420)
..+||..+..-+..-|. ..-...++.+++|+..++..|.+.|++. +....+..+ ....|++++.- .+.
T Consensus 284 ~GT~~~~~~~~l~~al~-----~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~ 358 (406)
T TIGR01814 284 ISNPPILSVAALRGSLD-----IFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPG 358 (406)
T ss_pred eCCccHHHHHHHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCH
Confidence 34566555444333332 1112246888999999999999998764 211112111 12346766532 244
Q ss_pred HHH-HHHHHhcceEEcCC--C--ceeccc-C-CcCCHHHHHHHHHhh
Q psy16707 88 TQV-EKLIKEHSVYLTKD--G--RISMAG-V-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv-~~L~~~~~IY~~~~--G--Rinvag-l-~~~ni~~va~ai~~v 127 (420)
+++ +.|. +++|++... | ||++.+ . +.++||+++++|.++
T Consensus 359 ~~~~~~L~-~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~ 404 (406)
T TIGR01814 359 KAVFQALI-KRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEI 404 (406)
T ss_pred HHHHHHHH-HCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHHH
Confidence 554 5664 568987643 3 456533 3 679999999999764
No 356
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=84.42 E-value=9.3 Score=38.45 Aligned_cols=92 Identities=16% Similarity=0.271 Sum_probs=56.4
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HH-HHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-AT-QVEKLI 94 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~-qv~~L~ 94 (420)
+++..+..++...|.+ ..|.+ .+++.++..|..|.+.|.... | ...|+|.+.-+. .+ -++.|
T Consensus 252 ~~~~~~~~~a~~~l~~----~~~~~---~~~~~~~~~r~~l~~~L~~~~----~----~~~g~f~~~~~~~~~~~~~~l- 315 (357)
T PRK14809 252 AASELACRAGLAALDD----DEHVE---RTVETARWAREYIREELDAPT----W----ESAGNFVLAEVGDASAVAEAA- 315 (357)
T ss_pred CCCHHHHHHHHHHhCC----HHHHH---HHHHHHHHHHHHHHHHhcCcc----C----CCCCCEEEEECCCHHHHHHHH-
Confidence 3455667777788876 34544 445666677888888885421 2 467899888773 33 34455
Q ss_pred HhcceEEcCCC--------ceecccCCcCCHHHHHHHHHh
Q psy16707 95 KEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 95 ~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~ 126 (420)
++++|.+.+.. ||+++ +...++...++|.+
T Consensus 316 ~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~ 353 (357)
T PRK14809 316 QERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNE 353 (357)
T ss_pred HHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHH
Confidence 57799887532 44443 34555555555544
No 357
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=84.40 E-value=7.9 Score=38.30 Aligned_cols=78 Identities=17% Similarity=0.337 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-HHHHHHHHhcceEEcC-------CC---
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTK-------DG--- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~qv~~L~~~~~IY~~~-------~G--- 105 (420)
++++.++++++..|+.|.+.|++.+ |... .+.|.|-..-+. . +=.+.| .+++|++.. .|
T Consensus 265 ~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~ 338 (360)
T TIGR00858 265 QEEPWRREKLLALIARLRAGLEALG----FTLM-PSCTPIVPVIIGDNASALALAEEL-QQQGIFVGAIRPPTVPAGTSR 338 (360)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHcC----CccC-CCCCCEEEEEeCCHHHHHHHHHHH-HHCCeeEeeeCCCCCCCCCce
Confidence 3456778999999999999998753 3333 344544433332 2 334555 567999952 22
Q ss_pred -ceeccc-CCcCCHHHHHHHH
Q psy16707 106 -RISMAG-VTSKNVGYLAKAI 124 (420)
Q Consensus 106 -Rinvag-l~~~ni~~va~ai 124 (420)
||++.. .+.++++.++++|
T Consensus 339 iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 339 LRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred EEEEEcCCCCHHHHHHHHHhh
Confidence 677776 4778888888876
No 358
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=84.37 E-value=8.2 Score=39.21 Aligned_cols=98 Identities=14% Similarity=0.190 Sum_probs=62.0
Q ss_pred chHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHHHHHHHHhcc
Q psy16707 20 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIKEHS 98 (420)
Q Consensus 20 ~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~qv~~L~~~~~ 98 (420)
..+..++..+|++.+ |.. +....++++..|+.|.+.|++++ + +..+..+.|+|.+.-+. .+++...-++++
T Consensus 253 ~~~~~~a~~~l~~~~----~~~-~~~~~~~~~~~r~~l~~~L~~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~l~~~g 324 (364)
T PRK04781 253 TPCAALAEQALSAPA----LAV-TARRVAEVRAERERLHAALAQLP--G-VRRVYPSQGNFLLVRFDDAEAAFQALLAAG 324 (364)
T ss_pred HHHHHHHHHHHhccc----HHH-HHHHHHHHHHHHHHHHHHHHhCC--C-CCeECCCCCcEEEEEcCCHHHHHHHHHHCC
Confidence 334445666777653 222 22223367788999999998752 2 44456788999998774 344444445789
Q ss_pred eEEcCC-------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 99 VYLTKD-------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 99 IY~~~~-------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
|.+.+. + ||+++ ++...+++.+||..+
T Consensus 325 I~v~~~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~ 360 (364)
T PRK04781 325 VVVRDQRAAPRLSDALRITLG--TPEQNDRVLAALQRT 360 (364)
T ss_pred eEEeeCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHH
Confidence 988542 2 45554 567888999998765
No 359
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=84.34 E-value=11 Score=39.07 Aligned_cols=106 Identities=12% Similarity=0.092 Sum_probs=67.9
Q ss_pred hccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC----CCc---eEEe-
Q psy16707 304 AFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIG---MFCY- 373 (420)
Q Consensus 304 ~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~----q~G---mF~~- 373 (420)
.+..+||.++-+.....| + ..++| ++.+.+|.+++.+.+++.++++|. ...+.. ++- .|.+
T Consensus 235 ~t~~TP~v~~l~a~~~~l-----~-~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~---l~~~~~~~~~rS~tvt~v~~~ 305 (374)
T TIGR01365 235 STINTPSMLCVEDWLDAL-----K-WAESIGGLKPLIARADDNLAVLEAFVAKNNW---IHFLAETPEIRSNTSVCLKVV 305 (374)
T ss_pred CCCCChHHHHHHHHHHHH-----H-HHHHccCHHHHHHHHHHHHHHHHHHHHHCCC---cccCCCChhhcCCCeEEEEeC
Confidence 456677877776555433 1 11233 888889999999999999999983 122221 121 1222
Q ss_pred cC-C-----C-----HHHHHHHHHhCCeEEeCCC--------cEEEcc-cCCCCHHHHHHHHHHH
Q psy16707 374 TG-L-----N-----ATQVEKLIKEHSVYLTKDG--------RISMAG-VTSKNVGYLAKAIHAV 418 (420)
Q Consensus 374 ~~-l-----~-----~~~v~~Ll~e~~Vy~~p~g--------Ris~ag-l~~~ni~~la~AI~~v 418 (420)
.+ . + ...+...++++||.+.+|. ||+--| ++.++|+.+..+|+=+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 306 DPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred CccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 12 3 1 3445545567799988752 887655 7888899998888643
No 360
>PLN02721 threonine aldolase
Probab=84.22 E-value=9.8 Score=37.73 Aligned_cols=73 Identities=14% Similarity=0.258 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCc-ccc-ccccceeec-C----C-CHHHHHHHHHhcceEEcCCC----ceecc-cCCcCCH
Q psy16707 51 ISMRQSLKDNLQKEGSNKPWN-HIT-DQIGMFCYT-G----L-NATQVEKLIKEHSVYLTKDG----RISMA-GVTSKNV 117 (420)
Q Consensus 51 ~~~R~~l~~~L~~~~~~~~w~-~i~-~Q~GmFs~~-g----L-~~~qv~~L~~~~~IY~~~~G----Rinva-gl~~~ni 117 (420)
...++.|.+.|++... |. .+. .+.+|+++. . . +.+-+++|. +++|++.+.+ |++++ ..+.+++
T Consensus 264 ~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~lR~~~~~~~~~~~i 339 (353)
T PLN02721 264 HKKAKLLAEGLNQIKG---LRVNVAAVETNIVYFDITDGSRITAEKLCKSLE-EHGVLLMPGNSSRIRVVTHHQISDSDV 339 (353)
T ss_pred HHHHHHHHHHHHhCCC---cEEecCCccceEEEEEccCCccccHHHHHHHHH-hCCcEEecCCCceEEEEecCcCCHHHH
Confidence 4567788888876521 21 122 234444432 1 2 334566775 7899987665 78886 7899999
Q ss_pred HHHHHHHHhh
Q psy16707 118 GYLAKAIHAN 127 (420)
Q Consensus 118 ~~va~ai~~v 127 (420)
++++++|.++
T Consensus 340 ~~~~~~l~~~ 349 (353)
T PLN02721 340 QYTLSCFQQA 349 (353)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 361
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=84.16 E-value=12 Score=37.46 Aligned_cols=93 Identities=18% Similarity=0.294 Sum_probs=60.2
Q ss_pred chHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccc--ceeecCC-CHHHHHHHHHh
Q psy16707 20 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIG--MFCYTGL-NATQVEKLIKE 96 (420)
Q Consensus 20 ~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~G--mFs~~gL-~~~qv~~L~~~ 96 (420)
.....++...|++++ | ++.++++++..|..|.+.|++.+. .-+.| +|.+..+ +.+++...-.+
T Consensus 225 ~~~~~~~~~~L~~~~----~---~~~~~~~~~~~r~~l~~~L~~~~~-------~~~~~~~~f~~~~~~~~~~~~~~l~~ 290 (330)
T PRK05664 225 GPTRWLAQAALADTP----W---QRRQRERLLAASQRLAALLRRHGL-------TPAGGCALFQWVRTEDAAALHEFLAR 290 (330)
T ss_pred HHHHHHHHHHHhChH----H---HHHHHHHHHHHHHHHHHHHHHCCC-------cccCCcceEEEEecCCHHHHHHHHHH
Confidence 344567777887653 3 345788888889999999988642 12334 6666654 45556444467
Q ss_pred cceEEcCC-----CceecccCCcCCHHHHHHHHHhh
Q psy16707 97 HSVYLTKD-----GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 97 ~~IY~~~~-----GRinvagl~~~ni~~va~ai~~v 127 (420)
++|.+..- =||++++ +..+.+.+.+++..+
T Consensus 291 ~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~ 325 (330)
T PRK05664 291 RGILTRLFEQPASLRFGLPA-DEADWARLDQALLAY 325 (330)
T ss_pred CCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHH
Confidence 79988432 2556554 456688888888765
No 362
>PLN02672 methionine S-methyltransferase
Probab=84.05 E-value=8.6 Score=45.25 Aligned_cols=85 Identities=24% Similarity=0.366 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---------------------CCCHHHH-HHHH
Q psy16707 37 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---------------------GLNATQV-EKLI 94 (420)
Q Consensus 37 ~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---------------------gL~~~qv-~~L~ 94 (420)
..|.+.++++++.+++-|+.+.+.|++.+ |..+.-+-|+|.+. +++.+++ +.|.
T Consensus 962 ~~~~~~l~e~r~~Lk~rRd~L~e~L~~~G----i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LL 1037 (1082)
T PLN02672 962 SDLLDGVAEQKKILKSRAERLKETLEACG----WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAIL 1037 (1082)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHH
Confidence 35999999999999999999999998863 66667788999876 2344444 4687
Q ss_pred HhcceEEcCC------C--ceecccCCcCCHHHHHHHHHh
Q psy16707 95 KEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 95 ~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~ 126 (420)
++.+|.+.+. | |||++. ....++...+.|.+
T Consensus 1038 ee~GVaV~PGs~FG~~g~~RIsfa~-~~e~LeeALerL~k 1076 (1082)
T PLN02672 1038 KSTGLCINSSSWTGIPGYCRFSFAL-EDSEFDRALKAIAR 1076 (1082)
T ss_pred HcCCEEEecCcccCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 8889988752 1 677763 55555555555544
No 363
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=83.90 E-value=7.2 Score=39.37 Aligned_cols=92 Identities=16% Similarity=0.236 Sum_probs=58.0
Q ss_pred HHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHH-HHHHHHhcce
Q psy16707 22 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQ-VEKLIKEHSV 99 (420)
Q Consensus 22 Ga~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~q-v~~L~~~~~I 99 (420)
...++...|.+.. .+.++..++.++..|+.|.+.|++++. |..+....|.|-+..+. .++ .++|. +++|
T Consensus 248 ~~~~a~~~L~~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~ps~~nfi~~~~~~~~~l~~~L~-~~gi 318 (351)
T PRK01688 248 VADIAAQALSPQG-----IAAMRERVAEINANRQWLIAALKEIPC---VEQVFDSETNYILARFTASSAVFKSLW-DQGI 318 (351)
T ss_pred HHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHHhCCC---CCeECCCCCcEEEEEcCCHHHHHHHHH-HCCe
Confidence 4555556666532 133455667778889999999987532 33345667888887664 333 44565 6788
Q ss_pred EEcCC-------C--ceecccCCcCCHHHHHHHH
Q psy16707 100 YLTKD-------G--RISMAGVTSKNVGYLAKAI 124 (420)
Q Consensus 100 Y~~~~-------G--Rinvagl~~~ni~~va~ai 124 (420)
.+..- | ||++. +...++.+.+||
T Consensus 319 ~vr~~~~~~~~~~~iRis~~--~~~e~~~l~~al 350 (351)
T PRK01688 319 ILRDQNKQPGLSNCLRITIG--TREECQRVIDAL 350 (351)
T ss_pred EEEECCCcCCCCCeEEEeCC--CHHHHHHHHHhh
Confidence 87532 2 56655 567788887776
No 364
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=83.79 E-value=4 Score=42.25 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCC-CccccccccceeecCCC------HHHHHHHHHhcceEEcCCC----ceeccc-C
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKP-WNHITDQIGMFCYTGLN------ATQVEKLIKEHSVYLTKDG----RISMAG-V 112 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~-w~~i~~Q~GmFs~~gL~------~~qv~~L~~~~~IY~~~~G----Rinvag-l 112 (420)
.++++++.+++.|.+.|++++.... |.. .+..|++.-.-+. ..++...-.+++|++...| ||+.+- +
T Consensus 303 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~ 381 (406)
T PRK12381 303 EMLNGVKQRHDWFVERLNTINARYGLFSE-IRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNI 381 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCEEE-EecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccC
Confidence 4567777888888888877643222 222 2344665433332 2344333456799987544 456555 8
Q ss_pred CcCCHHHHHHHHHhh
Q psy16707 113 TSKNVGYLAKAIHAN 127 (420)
Q Consensus 113 ~~~ni~~va~ai~~v 127 (420)
+..+|+.+.++|.++
T Consensus 382 t~~~i~~~~~~l~~~ 396 (406)
T PRK12381 382 SEEEITTGLDRFARA 396 (406)
T ss_pred CHHHHHHHHHHHHHH
Confidence 889999998888765
No 365
>PRK02948 cysteine desulfurase; Provisional
Probab=83.71 E-value=9.8 Score=38.52 Aligned_cols=83 Identities=10% Similarity=0.112 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----CCCccccccccc--eeecCCCHHHHH-HHHHhcceEEcC-----------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSN----KPWNHITDQIGM--FCYTGLNATQVE-KLIKEHSVYLTK----------- 103 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~----~~w~~i~~Q~Gm--Fs~~gL~~~qv~-~L~~~~~IY~~~----------- 103 (420)
+++.+++++...|..|.+.|++++.. +.-+++ ..++ |...+++.+++. .| ++++|++..
T Consensus 254 ~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p 330 (381)
T PRK02948 254 NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSC--LPHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVGKQEP 330 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccC--cCCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCCCCCC
Confidence 46777899999999999999877531 001111 2234 344566666544 45 677999862
Q ss_pred --------------CC--ceecccC-CcCCHHHHHHHHHhh
Q psy16707 104 --------------DG--RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 104 --------------~G--Rinvagl-~~~ni~~va~ai~~v 127 (420)
.+ ||++... +.++||.+.++|.++
T Consensus 331 ~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~ 371 (381)
T PRK02948 331 SKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI 371 (381)
T ss_pred CHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 12 5555444 557899999988876
No 366
>PLN02452 phosphoserine transaminase
Probab=83.65 E-value=8 Score=39.91 Aligned_cols=105 Identities=22% Similarity=0.273 Sum_probs=70.1
Q ss_pred hhccCCCchHHHHHHHHHhCChhhHHHHHH---HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC--CCCceEE-ec-
Q psy16707 303 RAFYSSPPIHGARIVQEILGDPKLKAQWLT---EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT--DQIGMFC-YT- 374 (420)
Q Consensus 303 r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~---el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~--~q~GmF~-~~- 374 (420)
.+.+.+||.++.......| +|.. -++.+.+|.++..+.+++.|++. |.-.. ... .++.|-. |.
T Consensus 237 ~s~~~TP~v~~i~~l~~aL-------~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~--~~~~~~rs~~~vsF~~ 307 (365)
T PLN02452 237 DSLYNTPPCFGIYMCGLVF-------EDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVC--PVEKSVRSLMNVPFTL 307 (365)
T ss_pred CCccCChhHHHHHHHHHHH-------HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccC--CCChHHhCCeEEEEEc
Confidence 3677799999888776644 3443 27888999999999999999984 54111 111 1344333 32
Q ss_pred ---CCCHHHHHHHHHhCCeEEeCC-----C-cEEEc-ccCCCCHHHHHHHHHH
Q psy16707 375 ---GLNATQVEKLIKEHSVYLTKD-----G-RISMA-GVTSKNVGYLAKAIHA 417 (420)
Q Consensus 375 ---~l~~~~v~~Ll~e~~Vy~~p~-----g-Ris~a-gl~~~ni~~la~AI~~ 417 (420)
.+..+|++.+ ++.|+...|| | |+|+- +++.+.++.|++.+++
T Consensus 308 ~~~~~~~~f~~~~-~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~ 359 (365)
T PLN02452 308 GGSELEAEFVKEA-AKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD 359 (365)
T ss_pred CCchhHHHHHHHH-HHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHH
Confidence 2334566666 7999999886 2 77643 4577788888888775
No 367
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=83.62 E-value=4.8 Score=41.29 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee-cCC---CHHHHHHHHHhcceEEcC-------C--C--cee
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGL---NATQVEKLIKEHSVYLTK-------D--G--RIS 108 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~-~gL---~~~qv~~L~~~~~IY~~~-------~--G--Rin 108 (420)
..++++...+++.|.+.|++.+ |..+..+.+|+.+ +|- ..+-.+.|.++++|++.. . + ||+
T Consensus 298 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis 373 (402)
T TIGR01821 298 QDLRRAHQENVKRLKNLLEALG----IPVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRIT 373 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEE
Confidence 4455666778888888887764 4444444444333 232 123334566778999853 1 2 455
Q ss_pred cc-cCCcCCHHHHHHHHHhh
Q psy16707 109 MA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 109 va-gl~~~ni~~va~ai~~v 127 (420)
+. ..+.++|+++++++.++
T Consensus 374 ~~~~~t~edi~~~~~~l~~~ 393 (402)
T TIGR01821 374 PTPAHTDKMIDDLVEALLLV 393 (402)
T ss_pred eCCCCCHHHHHHHHHHHHHH
Confidence 43 46778999999999887
No 368
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=83.61 E-value=3.7 Score=42.89 Aligned_cols=40 Identities=13% Similarity=0.087 Sum_probs=29.8
Q ss_pred HHHHHHHhCCeEEeCCC------cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707 380 QVEKLIKEHSVYLTKDG------RISM-AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 380 ~v~~Ll~e~~Vy~~p~g------Ris~-agl~~~ni~~la~AI~~vv 419 (420)
.+...+.++||++.+.| ||+. ..++.++|+++.+++.+++
T Consensus 381 ~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l 427 (433)
T PRK08117 381 KILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEAL 427 (433)
T ss_pred HHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence 34344468899987632 7885 4589999999999998875
No 369
>PRK06460 hypothetical protein; Provisional
Probab=83.56 E-value=1.5 Score=45.11 Aligned_cols=69 Identities=22% Similarity=0.234 Sum_probs=45.8
Q ss_pred CCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707 197 KEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG 274 (420)
Q Consensus 197 ~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~ 274 (420)
+.|. ......+|+++++++.-++. . +.+.+|+.|+..++..+ +.|
T Consensus 37 ~~y~r~~~p~~~~L~~~lA~l~g~~~------~------------------------v~~~sG~~ai~~~l~al--~~~- 83 (376)
T PRK06460 37 YRYSREANPTVLELTKKIVELENAEM------G------------------------VAFSSGMGAISTTALAL--LKP- 83 (376)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCCc------E------------------------EEeCCHHHHHHHHHHHH--hCC-
Confidence 4454 34567889999998763321 1 45678888888876544 457
Q ss_pred CCEEEEcCCCCC----CcHHHHhhcCcc
Q psy16707 275 EKVIYVPTPTWG----NHIPICKHTGLE 298 (420)
Q Consensus 275 gd~VlvpdP~w~----ny~~i~~~aG~~ 298 (420)
||.|++++|.|+ .|...++..|++
T Consensus 84 Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~ 111 (376)
T PRK06460 84 GNSVLVHRDMFGRSYRFFTDYLKNWGVN 111 (376)
T ss_pred CCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence 999999987663 344555666654
No 370
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=83.54 E-value=10 Score=40.61 Aligned_cols=81 Identities=14% Similarity=0.257 Sum_probs=53.9
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------- 86 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--------- 86 (420)
.+++..+..++...|.+.+....|..+.. ++...|..+++.|++. +| +....-|-|||.+.-+.
T Consensus 389 ~~~~~~~q~a~~~aL~~~~~~~~~~~~~~----~~~~~r~~l~~~L~~~--~g-~~~~~p~g~fy~~~~l~~~~~~~~~~ 461 (517)
T PRK13355 389 LCSNVPAQSIVQTALGGHQSVKDYLVPGG----RVYEQRELVYNALNAI--PG-ISAVKPKAAFYIFPKIDVKKFNIHDD 461 (517)
T ss_pred CCcChHHHHHHHHHhcCCccHHHHHHHHH----HHHHHHHHHHHHHhcC--CC-cccCCCCeeeEEEeecCcccCCCCCH
Confidence 45666677778888876554455665543 3344588899999765 23 66677889999986542
Q ss_pred HHHHHHHHHhcceEEcC
Q psy16707 87 ATQVEKLIKEHSVYLTK 103 (420)
Q Consensus 87 ~~qv~~L~~~~~IY~~~ 103 (420)
.+-+..|-++++|-+.+
T Consensus 462 ~~~~~~ll~~~gV~v~p 478 (517)
T PRK13355 462 EQFALDLLHDKKVLIVQ 478 (517)
T ss_pred HHHHHHHHHhCCEEEeC
Confidence 24455666778887764
No 371
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=83.01 E-value=6.3 Score=39.52 Aligned_cols=78 Identities=18% Similarity=0.313 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-HHHHHHHHhcceEEcC-------CC----ce
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTK-------DG----RI 107 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~qv~~L~~~~~IY~~~-------~G----Ri 107 (420)
+.+++++...|+.|.+.|++.+ +..+..+.+|+++. +. . +=++.|+ +++|.+.. .| ||
T Consensus 290 ~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~lRi 363 (385)
T PRK05958 290 PERRERLAALIARLRAGLRALG----FQLMDSQSAIQPLI-VGDNERALALAAALQ-EQGFWVGAIRPPTVPAGTSRLRI 363 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEE-eCCHHHHHHHHHHHH-HCCceEecccCCCCCCCCceEEE
Confidence 4567889999999999998764 34344455555543 32 2 3355664 56999963 12 67
Q ss_pred eccc-CCcCCHHHHHHHHHhh
Q psy16707 108 SMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 108 nvag-l~~~ni~~va~ai~~v 127 (420)
+++. .+..+++.++++|.++
T Consensus 364 s~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 364 TLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred EecCCCCHHHHHHHHHHHHhc
Confidence 7764 5889999999998764
No 372
>PLN02368 alanine transaminase
Probab=82.94 E-value=6.4 Score=41.08 Aligned_cols=75 Identities=17% Similarity=0.265 Sum_probs=58.2
Q ss_pred CCCccchHHHHHHHHhCChhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee--cCCCHH
Q psy16707 15 YSSPPIHGARIVQEILGDPKL----KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGLNAT 88 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L----~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~--~gL~~~ 88 (420)
..+++..+-.++...|++++. .+.|.+|++.|++..+.-|..+++.|.+. + .|+...-|-|||.| ..|.+.
T Consensus 324 ~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~--~-g~~~~~P~Gafy~~~~i~lp~~ 400 (407)
T PLN02368 324 ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC--K-NVVCNFTEGAMYSFPQIKLPPK 400 (407)
T ss_pred cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--C-CeEeCCCCeeeEeccCCCCCHH
Confidence 345777777788888987642 24689999999999999999999999875 2 26667778999999 488887
Q ss_pred HHHH
Q psy16707 89 QVEK 92 (420)
Q Consensus 89 qv~~ 92 (420)
-++.
T Consensus 401 ~~~~ 404 (407)
T PLN02368 401 AIEA 404 (407)
T ss_pred HHHH
Confidence 7664
No 373
>PRK07568 aspartate aminotransferase; Provisional
Probab=82.62 E-value=13 Score=37.74 Aligned_cols=78 Identities=17% Similarity=0.216 Sum_probs=51.4
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHH-HHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQ-VEK 92 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~q-v~~ 92 (420)
++|.....++..+|+++ ..| ++.++++++..|..+.+.|++.. + +....-+-|+|.+.-|. .++ ++.
T Consensus 267 ~~s~~~q~~~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~~~ 337 (397)
T PRK07568 267 SPPTLEQIGAAALLDTP---ESY---FDEVREEYKKRRDILYEELNKIP--G-VVCEKPKGAFYIIAKLPVDDAEDFAKW 337 (397)
T ss_pred CCCcHHHHHHHHHhhCC---HHH---HHHHHHHHHHHHHHHHHHHhcCC--C-ceecCCCcceEEEEecCCCCHHHHHHH
Confidence 55666788888888764 234 55577788888999999997652 2 44444567788776663 333 455
Q ss_pred HHHh-----cceEEcC
Q psy16707 93 LIKE-----HSVYLTK 103 (420)
Q Consensus 93 L~~~-----~~IY~~~ 103 (420)
|.++ ++|.+.+
T Consensus 338 l~~~~~~~~~gv~v~p 353 (397)
T PRK07568 338 LLTDFNYNGETVMVAP 353 (397)
T ss_pred HHhhcccccceEEEeC
Confidence 6554 5676654
No 374
>PLN00144 acetylornithine transaminase
Probab=82.24 E-value=5.4 Score=41.13 Aligned_cols=103 Identities=11% Similarity=0.242 Sum_probs=60.9
Q ss_pred ccCCCccchHHHHHH---HHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CH
Q psy16707 13 AFYSSPPIHGARIVQ---EILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NA 87 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~---~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~ 87 (420)
.+|+.+|.- +.++. .++.+++ +.+.++.|.+++ |+.|.+.+.++. ....+. ..|+|..+-| +.
T Consensus 264 ~T~~~~pl~-~aaa~a~l~~i~~~~----~~~~~~~~g~~l---~~~l~~~~~~~~---~~~~vr-g~G~~~~l~l~~~~ 331 (382)
T PLN00144 264 STFAGGPLV-CNAALAVLDKISKPG----FLASVAKKGEYL---RELLRRKLGGNP---HVKEVR-GVGLLVGIQLDVPA 331 (382)
T ss_pred CCCCCCHHH-HHHHHHHHHHHhhch----HHHHHHHHHHHH---HHHHHHHHhhCC---Cceeee-cCceEEEEEecCcc
Confidence 356666655 44555 3444433 344555555554 444444444431 122322 4888877755 23
Q ss_pred HHHHHHHHhcceEEcCCCc-----eeccc-CCcCCHHHHHHHHHhh
Q psy16707 88 TQVEKLIKEHSVYLTKDGR-----ISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv~~L~~~~~IY~~~~GR-----invag-l~~~ni~~va~ai~~v 127 (420)
+++...-.+.+|.+.+.|+ ++.+. ++..+++...+.+.++
T Consensus 332 ~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~ 377 (382)
T PLN00144 332 GPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADC 377 (382)
T ss_pred HHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHH
Confidence 4444444578999887663 77888 8889999888888776
No 375
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=82.23 E-value=11 Score=39.31 Aligned_cols=79 Identities=19% Similarity=0.347 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEE-ecCCCH---HHHHHHHHhCCeEEeC-------CC----cEE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFC-YTGLNA---TQVEKLIKEHSVYLTK-------DG----RIS 399 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~-~~~l~~---~~v~~Ll~e~~Vy~~p-------~g----Ris 399 (420)
...++++++.-..+...++..|.+ .........- .+|.+. +..+.|+++ |||+.+ -| ||+
T Consensus 293 ~~~r~~L~~~~~~~~~~~~~~~~~----~~~s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~ 367 (388)
T COG0156 293 PERRERLQELAAFFRSLLKALGLV----LLPSESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRIT 367 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCc----cCCCCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEE
Confidence 344466666655565566666633 2222233222 245432 445778777 999954 23 888
Q ss_pred Eccc-CCCCHHHHHHHHHHH
Q psy16707 400 MAGV-TSKNVGYLAKAIHAV 418 (420)
Q Consensus 400 ~agl-~~~ni~~la~AI~~v 418 (420)
++.. +++.|+.+++++.++
T Consensus 368 lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 368 LTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ecCCCCHHHHHHHHHHHHhh
Confidence 8755 778899999999875
No 376
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=81.77 E-value=9.8 Score=38.24 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccc-eeec--C---CCHHH-HHHHHHhcceEEcCCC-------
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGM-FCYT--G---LNATQ-VEKLIKEHSVYLTKDG------- 105 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~Gm-Fs~~--g---L~~~q-v~~L~~~~~IY~~~~G------- 105 (420)
++.+++|++..|..|.+.|++.| |..+.. +.++ .++. . .+... .+.|+ +++|.+.+..
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~-~~gi~v~~g~~~~~~~i 336 (363)
T TIGR02326 262 VAARHQRYQQNQKTLVAGMRALG----FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLK-EQGFVIYPGKVSQVDCF 336 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCceEEEEECCCCCCCCHHHHHHHHH-HCCEEEECCcCCCCCEE
Confidence 55678999999999999998764 333221 3343 2333 2 33344 45665 5588885442
Q ss_pred ceec-ccCCcCCHHHHHHHHHhh
Q psy16707 106 RISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 Rinv-agl~~~ni~~va~ai~~v 127 (420)
||+. .-.+..+++.++++|.++
T Consensus 337 Ri~~~~~~~~edv~~~l~~l~~~ 359 (363)
T TIGR02326 337 RIGNIGEVDAADITRLLTAIGKA 359 (363)
T ss_pred EEecCCCCCHHHHHHHHHHHHHH
Confidence 8875 446788999999998876
No 377
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=81.76 E-value=14 Score=37.57 Aligned_cols=96 Identities=17% Similarity=0.219 Sum_probs=62.3
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKL 93 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L 93 (420)
+++......+...|.++ .|.++ .++.++..|..|.+.|++.+ |. +....|+|-+..+. .+-++.|
T Consensus 262 ~~~~~~q~~~~~~l~~~----~~~~~---~~~~~~~~r~~l~~~L~~~g----~~-~~p~~g~fl~~~~~~~~~~l~~~l 329 (371)
T PRK05166 262 NVNGAAQAAALAALDDE----EHLAK---GVALALAERERLKKELAEMG----YR-IAPSRANFLFFDARRPASAVAEAL 329 (371)
T ss_pred CCCHHHHHHHHHHhcCH----HHHHH---HHHHHHHHHHHHHHHHHHCc----Ce-eCCCcCCEEEEeCCCCHHHHHHHH
Confidence 45555556677777764 45443 34566677888888888763 43 34567898887653 3345566
Q ss_pred HHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v 127 (420)
. +++|.+.+.. ||+++. +...+.+.+++..+
T Consensus 330 ~-~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i 368 (371)
T PRK05166 330 L-RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKV 368 (371)
T ss_pred H-HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHH
Confidence 5 4699886421 677663 45688999988775
No 378
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=81.63 E-value=2.8 Score=43.53 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=28.7
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+.+.||++|+.+++..+ +.| ||.|++++|+|+..
T Consensus 72 vvt~gg~~Ai~~~l~al--l~~-Gd~Il~~~~~y~~~ 105 (388)
T PRK08861 72 VVTNCGTSALNLWVSAL--LGP-DDLIVAPHDCYGGT 105 (388)
T ss_pred EEECCHHHHHHHHHHHH--cCC-CCEEEEcCCchHHH
Confidence 67999999999988644 457 99999999999953
No 379
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=81.55 E-value=16 Score=37.38 Aligned_cols=85 Identities=16% Similarity=0.095 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCC-ceEEec-C-----CCHHHHHHHHHhCCeEEeC-------C-Cc
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQI-GMFCYT-G-----LNATQVEKLIKEHSVYLTK-------D-GR 397 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q~-GmF~~~-~-----l~~~~v~~Ll~e~~Vy~~p-------~-gR 397 (420)
++.+.+|.++..+.+++.|++.+.-..+..-. .++ +++.+. + .+.+.+.+|+++ +|.+.. + -|
T Consensus 270 ~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vR 348 (378)
T PRK03080 270 LDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRDAPNGLR 348 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccCCCCcEE
Confidence 57777888999999999999886311111001 123 355542 2 234566777654 777642 2 29
Q ss_pred EEEccc-CCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl-~~~ni~~la~AI~~vv 419 (420)
||+-+- +.++|+++.++|.+++
T Consensus 349 is~~~~~t~~di~~l~~al~~~~ 371 (378)
T PRK03080 349 IWCGPTVEPADVEALTPWLDWAF 371 (378)
T ss_pred EecCCCCCHHHHHHHHHHHHHHH
Confidence 997765 5678999999998864
No 380
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=81.48 E-value=8.3 Score=38.47 Aligned_cols=81 Identities=17% Similarity=0.263 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccceeec----CCCH-HHHHHHHHhcceEEcCC------C--c
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYT----GLNA-TQVEKLIKEHSVYLTKD------G--R 106 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~GmFs~~----gL~~-~qv~~L~~~~~IY~~~~------G--R 106 (420)
++.+.++...+++.|.+.|++.+ |..+.. ..+++.+. +.+. +-++.|.++|+|++... + |
T Consensus 257 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iR 332 (356)
T cd06451 257 LENRWARHRRLAKALREGLEALG----LKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFR 332 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEE
Confidence 45567788888888899888753 333321 23454433 3333 45567877779998631 2 6
Q ss_pred eecccC-CcCCHHHHHHHHHhh
Q psy16707 107 ISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 107 invagl-~~~ni~~va~ai~~v 127 (420)
++++.. +..+|+++.+++.++
T Consensus 333 is~~~~~~~e~v~~~~~~l~~~ 354 (356)
T cd06451 333 IGHMGEATREDVLGVLSALEEA 354 (356)
T ss_pred EecCCCCCHHHHHHHHHHHHHH
Confidence 676655 579999999999875
No 381
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=81.07 E-value=5.7 Score=42.31 Aligned_cols=92 Identities=13% Similarity=0.051 Sum_probs=58.8
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCC---CC--CHHHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPI---IG--APDFGKLAAQLAYGEDCPQLKDNLISIVQGI 235 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~---~G--~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~ 235 (420)
.+||.+--.|.++-|..+.++.|.+|.........+.+|.-. .| ...+++.++++. |... +
T Consensus 75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~-gae~---------a---- 140 (454)
T TIGR00474 75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT-GAED---------A---- 140 (454)
T ss_pred ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh-CCCc---------E----
Confidence 456765446677777778888888888776643223333211 12 267777787765 4321 1
Q ss_pred CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707 236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG 286 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ 286 (420)
+.+.+|+.|+.+++.. +.+ ||+|++++-.++
T Consensus 141 ----------------lvv~sg~aAi~l~l~~---l~~-GdeVIvs~~e~v 171 (454)
T TIGR00474 141 ----------------LVVNNNAAAVLLALNT---LAK-GKEVIVSRGELV 171 (454)
T ss_pred ----------------EEECCHHHHHHHHHHH---hCC-cCEEEECCChhh
Confidence 4577899898877754 346 999999987643
No 382
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=81.02 E-value=3.4 Score=42.90 Aligned_cols=38 Identities=8% Similarity=0.093 Sum_probs=28.8
Q ss_pred ecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707 253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK 293 (420)
Q Consensus 253 qt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~ 293 (420)
.+.+|+.|+..+.. ..+.| ||.|++++|.|+.+...++
T Consensus 85 ~~~sG~~Ai~~~l~--~~l~~-Gd~Vl~~~~~y~~~~~~~~ 122 (398)
T PRK07504 85 ATASGMAAVTAAIL--CQVKA-GDHVVAARALFGSCRYVVE 122 (398)
T ss_pred EecCHHHHHHHHHH--HHhCC-CCEEEEcCCchhHHHHHHH
Confidence 47799999876553 23557 9999999999998765543
No 383
>PRK07671 cystathionine beta-lyase; Provisional
Probab=80.65 E-value=3.5 Score=42.46 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=26.3
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC-CcHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG-NHIP 290 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~-ny~~ 290 (420)
+.+.+|++++..+..+ +.| ||.|++++|+|+ .|..
T Consensus 69 ~~~~sG~aai~~~~~~---l~~-Gd~Viv~~~~y~~~~~~ 104 (377)
T PRK07671 69 FAFGSGMAAITAVMML---FSS-GDHVILTDDVYGGTYRV 104 (377)
T ss_pred EEeCCHHHHHHHHHHH---hCC-CCEEEECCCccchHHHH
Confidence 4577888888766543 447 999999999999 5543
No 384
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=80.60 E-value=1.1e+02 Score=35.74 Aligned_cols=221 Identities=15% Similarity=0.165 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHhcceEEcC--CC--ceecccCCc-C
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK--DG--RISMAGVTS-K 115 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~~~IY~~~--~G--Rinvagl~~-~ 115 (420)
+-|+++.+|+..+-..|.+.|++.|-.--++..- ...-+.+-+-+.+++..--.+.+|.+-. ++ ++++--.|+ .
T Consensus 338 ~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~fF-~~~~v~~~~~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~ 416 (939)
T TIGR00461 338 KGLKNIARRIHSLTSILANGLENDPHELINKTWF-DTLTVKVGNGISSELLKAAEEFNINLRAVDTTTVGIALDETTTKA 416 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcc-ceEEEEeCCCCHHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHH
Confidence 4488899999999999999998866332221100 1111122123445554444666776642 23 355555444 5
Q ss_pred CHHHHHHHHHhhC--C-------------CcccchhhhccccCCChH-------HHH----HHHHHccCCCCceeecccc
Q psy16707 116 NVGYLAKAIHANG--S-------------LPIRFQDARTSSVKVPSS-------NLL----TEAFKKDTNVNKINLGVGA 169 (420)
Q Consensus 116 ni~~va~ai~~v~--~-------------~p~~~~~~~~~~~~~d~i-------~~l----~~~~~~d~~~~kInL~iG~ 169 (420)
+|+.+++++.... . +|-.+. | .+...-.|+ ..+ ....++|...+..-++.|.
T Consensus 417 di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-r-~~~~~~~~~f~~~~sE~e~~r~~~~L~~kn~~~~~~fi~lGs 494 (939)
T TIGR00461 417 DVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQ-R-TDEILRNEVFNMYHSETEMLRYLHRLESKDLALNNSMIPLGS 494 (939)
T ss_pred HHHHHHHHhcCCCccccchhhhhhhhcccCchhhh-c-cCcccCCcccccCCCHHHHHHHHHHHHhcCCCccccCCCCcc
Confidence 6999998885221 0 221111 1 222222233 223 3334444444557888898
Q ss_pred cccCCCCCCchHHHHHHHHHHHccCCCCCCCCC---CCCHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCcccc
Q psy16707 170 YRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPI---IGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRV 243 (420)
Q Consensus 170 y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~---~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~ 243 (420)
|. -...+.|........+-...|-|.|- .|.-+.-...++|+ .|-+. ++
T Consensus 495 ct-----mk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~--------~S------------ 549 (939)
T TIGR00461 495 CT-----MKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDA--------IS------------ 549 (939)
T ss_pred CC-----CccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCC--------cc------------
Confidence 73 34445554432221111224556654 34444444444444 55441 33
Q ss_pred ccccccceeecccchHHHHHHHHHHHhc------CCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 244 GAAFQISIVQGISGTGSLRVGAAFLKNF------FPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 244 ~~~~~~~~vqt~gGtgal~~~~~~l~~~------~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+|..||+.+-..++..+..+ .. -++|++|+-.-+....-++.+|++
T Consensus 550 --------l~p~aGA~gE~agL~aiR~y~~~rge~~-R~~vlip~saHgtnPasa~~~G~~ 601 (939)
T TIGR00461 550 --------LQPNSGAQGEYAGLRVIRSYHESRGENH-RNICLIPVSAHGTNPASAAMAGMQ 601 (939)
T ss_pred --------cCCchHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEEccccCcCHHHHHHCCCE
Confidence 67888885443322222211 12 368999887664444446777775
No 385
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=80.54 E-value=17 Score=37.00 Aligned_cols=107 Identities=8% Similarity=0.070 Sum_probs=66.1
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHH
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQV 90 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv 90 (420)
+..| +++......+...|.+ .+|.+++..+ ++..|+.+.+.|++.+ +.... ..|.|-+.-+ ..+++
T Consensus 248 ~~~~-~~~~~~q~aa~~~l~~----~~~~~~~~~~---~~~~r~~~~~~l~~~g----~~~~~-~~~nf~~~~~~~~~~~ 314 (366)
T PRK01533 248 RLPF-NVSSLAQKAATIAFGD----DEFIEEIVRV---NTEGLRQYESFCKENE----IPFYQ-SQTNFIFLPVENGGEI 314 (366)
T ss_pred cCCC-CcCHHHHHHHHHHhCC----HHHHHHHHHH---HHHHHHHHHHHHHhCC----CccCC-CcCcEEEEeCCCHHHH
Confidence 4444 4566677888888876 4677666443 3444555666666554 33333 3577777765 44444
Q ss_pred HHHHHhcceEEcCC---CceecccCCcCCHHHHHHHHHhhCCCccc
Q psy16707 91 EKLIKEHSVYLTKD---GRISMAGVTSKNVGYLAKAIHANGSLPIR 133 (420)
Q Consensus 91 ~~L~~~~~IY~~~~---GRinvagl~~~ni~~va~ai~~v~~~p~~ 133 (420)
...-.+++|.+.+- =||+++.- ...+++.+|+.++.....+
T Consensus 315 ~~~l~~~GI~Vr~~~~~iRis~~~~--~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 315 YEACAHAGFIIRPFPNGVRITVGTR--EQNEGVISVLQQHFENKKR 358 (366)
T ss_pred HHHHHHCCcEEccCCCceEEeCCCH--HHHHHHHHHHHHHHHhccc
Confidence 44334788888532 27776655 7788999999988544433
No 386
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=80.49 E-value=18 Score=37.33 Aligned_cols=86 Identities=21% Similarity=0.217 Sum_probs=51.9
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------H-
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------A- 87 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---------~- 87 (420)
++.....++..+|.+. ...|.++ ++++++..|+.+.+.|++.+ +.+-...-+-|||.+.-++ .
T Consensus 282 ~~~~~q~a~~~~l~~~--~~~~~~~---~~~~~~~~~~~~~~~L~~~~--~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~ 354 (409)
T PLN00143 282 PPTFIQAAIPEILEKT--TEDFFSK---TINILRAALAFCYDKLKEIP--CIMCPQKAEGAFFALVKLNLLLLEDIEDDM 354 (409)
T ss_pred CCchHHHHHHHHHhcC--hHHHHHH---HHHHHHHHHHHHHHHHhcCC--CCCCCCCCCeeEEEEEecchhhcCCCCCHH
Confidence 3444556667777642 1345444 45666667777888887643 2111123467999998774 2
Q ss_pred HHHHHHHHhcceEEcCCC--------ceecc
Q psy16707 88 TQVEKLIKEHSVYLTKDG--------RISMA 110 (420)
Q Consensus 88 ~qv~~L~~~~~IY~~~~G--------Rinva 110 (420)
+-+..|-++++|.+.+.. |||++
T Consensus 355 ~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~ 385 (409)
T PLN00143 355 EFCLKLAKEESLIILPGVTVGLKNWLRITFA 385 (409)
T ss_pred HHHHHHHHhCCEEEeCccccCCCCeEEEEEc
Confidence 334567678899887643 67765
No 387
>PRK08064 cystathionine beta-lyase; Provisional
Probab=80.44 E-value=3.9 Score=42.27 Aligned_cols=34 Identities=9% Similarity=0.173 Sum_probs=26.0
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
+.+.+|+.|+.++..+ +.| ||.|++++|.|+...
T Consensus 73 v~~~sG~~ai~~~l~~---l~~-Gd~Vlv~~~~y~~~~ 106 (390)
T PRK08064 73 FAFASGMAAISTAFLL---LSK-GDHVLISEDVYGGTY 106 (390)
T ss_pred EEECCHHHHHHHHHHH---hCC-CCEEEEccCccchHH
Confidence 4578889998877653 347 999999999998433
No 388
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=80.22 E-value=6.2 Score=41.56 Aligned_cols=44 Identities=11% Similarity=0.135 Sum_probs=32.1
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH----HHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP----ICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~----i~~~aG~~ 298 (420)
+.+.||+.|+..++..+ +.| ||.|++++|.|+.-.. +++..|++
T Consensus 83 l~~~sG~~Ai~~al~~l--l~~-GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 83 LAVSSGQAAITYSILNI--ASA-GDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred EEECCHHHHHHHHHHHH--hCC-CCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 67999999999887533 457 9999999999975333 33445654
No 389
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=80.06 E-value=5 Score=42.41 Aligned_cols=80 Identities=20% Similarity=0.178 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH------------HH-HHHHHHhcceEEcCCCceecc
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA------------TQ-VEKLIKEHSVYLTKDGRISMA 110 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~------------~q-v~~L~~~~~IY~~~~GRinva 110 (420)
+.+++|+. .|+.|.+.|++.| |..+.-+-|+|.|.-..+ .. +..|-++.+|..+..|.++..
T Consensus 291 ~~l~~~~~-~r~~l~~~L~~~G----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~ 365 (431)
T cd00617 291 DYLRHRVE-QVRYLGDRLDEAG----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAG 365 (431)
T ss_pred HHHHHHHH-HHHHHHHHHHHCC----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecc
Confidence 44566655 4588999998876 555666788888875432 11 447889999999887775332
Q ss_pred -----------------------cCCcCCHHHHHHHHHhhC
Q psy16707 111 -----------------------GVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 111 -----------------------gl~~~ni~~va~ai~~v~ 128 (420)
+.+.+.+||||++|.++-
T Consensus 366 ~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~ 406 (431)
T cd00617 366 RDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALY 406 (431)
T ss_pred cCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHH
Confidence 566788899999988873
No 390
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=79.96 E-value=17 Score=36.82 Aligned_cols=106 Identities=21% Similarity=0.288 Sum_probs=65.6
Q ss_pred cCCCchHHHHHHHHHhCChhhHHHHH-HH--HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCce-EEec--CC--
Q psy16707 306 YSSPPIHGARIVQEILGDPKLKAQWL-TE--VKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGM-FCYT--GL-- 376 (420)
Q Consensus 306 ~s~pp~~ga~iv~~IL~dp~L~~~w~-~e--l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~Gm-F~~~--~l-- 376 (420)
+.+|+.++.......| + |. ++ ++.+.+|.++.++.+++.|+++ |.-.....-..+.+. +++. +.
T Consensus 233 ~~Tpn~~~i~~L~aal-----~--~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l 305 (355)
T cd00611 233 YNTPPTFAIYMMGLVL-----K--WLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEEL 305 (355)
T ss_pred CCCChHHHHHHHHHHH-----H--HHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhh
Confidence 5688877766554433 2 32 22 7778899999999999999998 631000000123433 5553 32
Q ss_pred CHHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 377 NATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 377 ~~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
+.+.... +.+.|+...++ | |+|+..- +.++|+++.++++++.
T Consensus 306 ~~~~~~~-~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 306 EKEFLKE-AEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred hHHHHHH-HHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 2333333 35788875433 2 9998653 7789999999998864
No 391
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=79.89 E-value=3.4 Score=42.67 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=27.4
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+.+.+|+.|+..++.+ +.| ||+|++++|.|+.....
T Consensus 69 l~~~SG~~Al~~~l~~---l~p-Gd~Vi~~~~~y~~t~~~ 104 (380)
T PRK06176 69 FAFASGLAGIHAVFSL---FQS-GDHVLLGDDVYGGTFRL 104 (380)
T ss_pred EEECCHHHHHHHHHHH---cCC-CCEEEEcCCChhHHHHH
Confidence 5678899999866543 457 99999999999865433
No 392
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=79.83 E-value=4.7 Score=41.55 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=28.4
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.+.+|+.|+..++.+ +.| ||.|++++|.|+.+...+
T Consensus 66 l~~~sG~~al~~~l~l---l~~-Gd~Vl~~~~~y~~~~~~~ 102 (378)
T TIGR01329 66 FAFSSGMAALDVITRL---LNN-GDEIIAGDDLYGGTDRLL 102 (378)
T ss_pred EEECCHHHHHHHHHHH---hCC-CCEEEEcCCCchHHHHHH
Confidence 5578889888876653 457 999999999998776543
No 393
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=79.52 E-value=14 Score=37.39 Aligned_cols=57 Identities=11% Similarity=0.101 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc------cccceeecCCCHHHHHHHHHhcceEEc
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD------QIGMFCYTGLNATQVEKLIKEHSVYLT 102 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~------Q~GmFs~~gL~~~qv~~L~~~~~IY~~ 102 (420)
++.+.+|+..+|+.|.+.|++.. .+..+.. ....|.+-|...+++...-.+++|.+.
T Consensus 257 ~~~~~~~~~~l~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~ 319 (382)
T TIGR03403 257 LDFEKSHVRRLRDRLEDALLELP---DVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAAS 319 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC---CEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEE
Confidence 67788999999999999997642 1222222 234677778888877643367788886
No 394
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=79.47 E-value=6.6 Score=39.89 Aligned_cols=51 Identities=14% Similarity=0.249 Sum_probs=33.8
Q ss_pred cccceeecCC--CH-HHHHHHHHhcceEEcCCC----ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 76 QIGMFCYTGL--NA-TQVEKLIKEHSVYLTKDG----RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 76 Q~GmFs~~gL--~~-~qv~~L~~~~~IY~~~~G----Rinva-gl~~~ni~~va~ai~~v 127 (420)
..|+|...-+ +. +-++.|.++ +|++.+.| ||+.+ ..+...++...+.|.++
T Consensus 333 ~~g~~~~i~~~~~~~~~~~~l~~~-Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 391 (396)
T PRK02627 333 GLGLMIGIELDRPAAEIVKKALEK-GLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEV 391 (396)
T ss_pred cCcEEEEEEecCcHHHHHHHHHHC-CeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHH
Confidence 4566544433 33 344556555 99997644 66655 78899999999888765
No 395
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=79.38 E-value=6.5 Score=41.33 Aligned_cols=35 Identities=11% Similarity=0.092 Sum_probs=28.3
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
+.+.+|+.|+.+++..+ +.| ||.|++++|.|+.-.
T Consensus 77 l~~ssG~~Ai~~al~al--~~~-Gd~Vl~~~~~Y~~t~ 111 (425)
T PRK06084 77 LAVASGMAAITYAIQTI--AEA-GDNIVSVAKLYGGTY 111 (425)
T ss_pred eEehhHHHHHHHHHHHH--hCC-CCEEEEeCCCcchHH
Confidence 56899999999988654 347 999999999998433
No 396
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=79.16 E-value=7.9 Score=40.82 Aligned_cols=82 Identities=11% Similarity=0.137 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CH----HHHHHHHHhCCeEEeCCC----cEEEc
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NA----TQVEKLIKEHSVYLTKDG----RISMA 401 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~----~~v~~Ll~e~~Vy~~p~g----Ris~a 401 (420)
..++.+++-+.|.+.|+++....++..-....|++.-+-+ +. ...+.+ .+.||++.+.| ||+.+
T Consensus 340 ~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~Gil~~~~~~~~lr~~p~ 418 (441)
T PRK05769 340 LLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEA-FKRGLLLLGAGKSAIRIIPP 418 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHH-HhCCcEEecCCCCEEEEeCC
Confidence 3455555555666666554321112212334466653212 11 223344 57899998865 66644
Q ss_pred c-cCCCCHHHHHHHHHHHh
Q psy16707 402 G-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 402 g-l~~~ni~~la~AI~~vv 419 (420)
- +++++|+++.+++.+++
T Consensus 419 l~~t~~~id~~~~~l~~~l 437 (441)
T PRK05769 419 LIITEEEADIGLEILEEAI 437 (441)
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 2 49999999999999876
No 397
>PLN02483 serine palmitoyltransferase
Probab=78.98 E-value=7.9 Score=41.44 Aligned_cols=89 Identities=16% Similarity=0.217 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cceeecCCC-HHHHHHHHHhcceEEcCC---------C--ce
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCYTGLN-ATQVEKLIKEHSVYLTKD---------G--RI 107 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----GmFs~~gL~-~~qv~~L~~~~~IY~~~~---------G--Ri 107 (420)
.+++++++..|+.|.+.|++.| |..+..+. +++.+.... ++=.+.|. +++|.+... + ||
T Consensus 368 ~~~~~~l~~~~~~l~~~L~~~G----~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi 442 (489)
T PLN02483 368 AQKLAQIRENSNFFRSELQKMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECL-KQNVAVVVVGFPATPLLLARARI 442 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC----CcccCCCCCCEEEEEECCHHHHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEE
Confidence 4456778888888888888764 22221222 222222111 23445565 458988632 2 78
Q ss_pred eccc-CCcCCHHHHHHHHHhhC-CCcccchhh
Q psy16707 108 SMAG-VTSKNVGYLAKAIHANG-SLPIRFQDA 137 (420)
Q Consensus 108 nvag-l~~~ni~~va~ai~~v~-~~p~~~~~~ 137 (420)
+++. .+.++|+...++|.+++ .+.+.+++.
T Consensus 443 ~isa~~t~edId~~l~~L~~~~~~~~~~~~~~ 474 (489)
T PLN02483 443 CISASHSREDLIKALEVISEVGDLVGIKYFPA 474 (489)
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHhCceeccC
Confidence 8886 67799999999999984 455555544
No 398
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=78.53 E-value=8.7 Score=39.29 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH----HHHHHHHHhcceEEcCCC----ceeccc-CCcCCH
Q psy16707 47 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA----TQVEKLIKEHSVYLTKDG----RISMAG-VTSKNV 117 (420)
Q Consensus 47 ~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~----~qv~~L~~~~~IY~~~~G----Rinvag-l~~~ni 117 (420)
.+++..+++.|.+.|++++.+. ... .+..|+|..+-+.+ +-++.| .+++|++...+ |++.+. .+.++|
T Consensus 305 ~~~~~~~~~~l~~~L~~~~~~~-~~~-v~g~g~~~~i~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~iR~~p~~~~t~~~i 381 (398)
T PRK03244 305 LENAERLGEQLRAGIEALGHPL-VDH-VRGRGLLLGIVLTAPVAKAVEAAA-REAGFLVNAVAPDVIRLAPPLIITDAQV 381 (398)
T ss_pred HHHHHHHHHHHHHHHHhcCCCc-eee-EeeccEEEEEEEeccHHHHHHHHH-HHCCeEEeecCCCEEEEECCCcCCHHHH
Confidence 3455566666777787654221 011 22467777665532 233445 45789987654 456555 888999
Q ss_pred HHHHHHHHhh
Q psy16707 118 GYLAKAIHAN 127 (420)
Q Consensus 118 ~~va~ai~~v 127 (420)
+++++++.++
T Consensus 382 ~~~~~~l~~~ 391 (398)
T PRK03244 382 DAFVAALPAI 391 (398)
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 399
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=78.48 E-value=11 Score=38.46 Aligned_cols=76 Identities=8% Similarity=0.203 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeC-----CC--cEEEccc-CCCC
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK-----DG--RISMAGV-TSKN 407 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p-----~g--Ris~agl-~~~n 407 (420)
.+++++++.++.+.+.|...+ + ..+. -|..-+.+.+.+...++++||++.. .+ ||++..- +.++
T Consensus 265 ~~~~~l~~l~~~l~~~l~~~~-~---~~~~----~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~ed 336 (370)
T PRK05937 265 LARKQLFRLKEYFAQKFSSAA-P---GCVQ----PIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDE 336 (370)
T ss_pred HHHHHHHHHHHHHHHhcCCCC-C---CCEE----EEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHH
Confidence 345778888888887765432 1 1110 1222233445555555788998862 22 9988543 7788
Q ss_pred HHHHHHHHHHHh
Q psy16707 408 VGYLAKAIHAVT 419 (420)
Q Consensus 408 i~~la~AI~~vv 419 (420)
|+.+.++|.+++
T Consensus 337 id~l~~~L~~~~ 348 (370)
T PRK05937 337 VDILVSVLATYL 348 (370)
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
No 400
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=78.32 E-value=11 Score=39.44 Aligned_cols=53 Identities=11% Similarity=0.142 Sum_probs=36.8
Q ss_pred CCceEEecCCCH-----------H-HHHHHHHhCCeEEeCCC------cEEEcc-cCCCCHHHHHHHHHHHhC
Q psy16707 367 QIGMFCYTGLNA-----------T-QVEKLIKEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 367 q~GmF~~~~l~~-----------~-~v~~Ll~e~~Vy~~p~g------Ris~ag-l~~~ni~~la~AI~~vv~ 420 (420)
..|++.++-+.+ . .++.+ .++||++.+.| ||..+- +++++|+...+++.++++
T Consensus 349 G~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 349 GLGSMIAAEFNDPQTGEPSAAIAQKIQQRA-LAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred ccceEEEEEecCCccCCcchHHHHHHHHHH-HHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 448888764421 2 22344 57899996532 677776 799999999999998863
No 401
>PRK10534 L-threonine aldolase; Provisional
Probab=78.31 E-value=21 Score=35.27 Aligned_cols=73 Identities=12% Similarity=0.177 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHHHHhcceEEcCCC--ceecc-cCCcCCHHHHHHH
Q psy16707 50 IISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKDG--RISMA-GVTSKNVGYLAKA 123 (420)
Q Consensus 50 i~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L~~~~~IY~~~~G--Rinva-gl~~~ni~~va~a 123 (420)
+.+.|..|.+.|++.| |..... .|.|.+.-+. .+++..+-++++|.+.+.- |+... .++...++.+.++
T Consensus 252 ~~~~r~~l~~~L~~~g----~~~~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~ 326 (333)
T PRK10534 252 DHDNAAWLAEQLREAG----ADVMRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAH 326 (333)
T ss_pred HHHHHHHHHHHHHhCC----CccCCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHH
Confidence 3446788999998865 333333 4888887654 4566666667899997644 55432 3788889999998
Q ss_pred HHhh
Q psy16707 124 IHAN 127 (420)
Q Consensus 124 i~~v 127 (420)
|.+.
T Consensus 327 l~~~ 330 (333)
T PRK10534 327 WRAF 330 (333)
T ss_pred HHHH
Confidence 8754
No 402
>PRK03321 putative aminotransferase; Provisional
Probab=78.29 E-value=31 Score=34.48 Aligned_cols=92 Identities=15% Similarity=0.241 Sum_probs=56.5
Q ss_pred hHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHH-HHHHHHhc
Q psy16707 21 HGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQ-VEKLIKEH 97 (420)
Q Consensus 21 hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~q-v~~L~~~~ 97 (420)
.....+...|.+ ...|.+.++.+ ...|..+.+.|++.+ |... ...|+|-+.-+. .++ ++.| +++
T Consensus 250 ~~q~~a~~~l~~---~~~~~~~~~~~----~~~r~~~~~~L~~~~----~~~~-~~~g~~i~i~l~~~~~~~~~~l-~~~ 316 (352)
T PRK03321 250 LAQAAAIASLAA---EDELLERVDAV----VAERDRVRAALRAAG----WTVP-PSQANFVWLPLGERTADFAAAA-AEA 316 (352)
T ss_pred HHHHHHHHHhcC---HHHHHHHHHHH----HHHHHHHHHHHHHCC----CccC-CCCCCEEEEeCCCCHHHHHHHH-HHC
Confidence 333334445543 24455544443 445667888887653 5433 345888887653 343 4455 678
Q ss_pred ceEEcCCC----ceecccCCcCCHHHHHHHHHhh
Q psy16707 98 SVYLTKDG----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 98 ~IY~~~~G----Rinvagl~~~ni~~va~ai~~v 127 (420)
+|++..-| ||++ -++.+.+++.+|+.++
T Consensus 317 gI~v~~~~~~~iRi~~--~~~~~~~~~~~al~~~ 348 (352)
T PRK03321 317 GVVVRPFAGEGVRVTI--GAPEENDAFLRAARAW 348 (352)
T ss_pred CEEEEccCCCcEEEee--CCHHHHHHHHHHHHHH
Confidence 99998632 5555 4668999999999886
No 403
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=78.04 E-value=5.2 Score=41.10 Aligned_cols=58 Identities=7% Similarity=0.056 Sum_probs=43.3
Q ss_pred CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707 201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV 280 (420)
Q Consensus 201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv 280 (420)
+.....+|.++++++.-++ .+ +.+.||+.|+.++..++ .| ||.|++
T Consensus 52 ~~p~~~~le~~lA~leg~~--------~~----------------------v~~~sG~aAi~~~l~~l---~~-GD~VI~ 97 (364)
T PRK07269 52 KNPTRAKLEETLAAIESAD--------YA----------------------LATSSGMSAIVLAFSVF---PV-GSKVVA 97 (364)
T ss_pred CCccHHHHHHHHHHHhCCC--------eE----------------------EEeCCHHHHHHHHHHHh---CC-CCEEEE
Confidence 3445778999999976322 22 67999999999887543 47 999999
Q ss_pred cCCCCCCcHHHH
Q psy16707 281 PTPTWGNHIPIC 292 (420)
Q Consensus 281 pdP~w~ny~~i~ 292 (420)
+.+.|..-...+
T Consensus 98 ~~~~yg~~~~~~ 109 (364)
T PRK07269 98 VRDLYGGSFRWF 109 (364)
T ss_pred ecCCcCchHHHH
Confidence 999998665543
No 404
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=77.88 E-value=14 Score=38.19 Aligned_cols=86 Identities=15% Similarity=0.218 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-C--CCCCc-cccccccceeec--CCCHHHH-HHHHHhcceEEcCC----------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEG-S--NKPWN-HITDQIGMFCYT--GLNATQV-EKLIKEHSVYLTKD---------- 104 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~-~--~~~w~-~i~~Q~GmFs~~--gL~~~qv-~~L~~~~~IY~~~~---------- 104 (420)
-++.+++|+..+++.|.+.|++.. . -+..+ .-..+.|++++. |.+.+++ +.|.++|+|.+...
T Consensus 306 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~ 385 (424)
T PLN02855 306 GMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRY 385 (424)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHH
Confidence 567888999999999999997642 1 01100 001234566555 6666655 46666778875421
Q ss_pred ------CceecccC-CcCCHHHHHHHHHhh
Q psy16707 105 ------GRISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 ------GRinvagl-~~~ni~~va~ai~~v 127 (420)
=||++.=. +.++|++++++|.++
T Consensus 386 ~g~~~~iRiS~~~ynt~~di~~l~~~l~~~ 415 (424)
T PLN02855 386 LGVNASARASLYFYNTKEEVDAFIHALKDT 415 (424)
T ss_pred hCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 25555433 448899999998876
No 405
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=77.79 E-value=12 Score=38.45 Aligned_cols=79 Identities=20% Similarity=0.265 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--H-HHHHHHHHhcceEEcCCC--ceecc---cCCcCCHH
Q psy16707 47 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--A-TQVEKLIKEHSVYLTKDG--RISMA---GVTSKNVG 118 (420)
Q Consensus 47 ~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~-~qv~~L~~~~~IY~~~~G--Rinva---gl~~~ni~ 118 (420)
.++...+|+.|.+.|++++.+ .+..+ +..|+|...-+. . +-+++|. +++|++...| .|-++ -.+..+|+
T Consensus 309 ~~~~~~~~~~l~~~L~~l~~~-~i~~~-~~~g~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~iRi~p~l~~t~e~i~ 385 (396)
T PRK04073 309 PERSLELGEYFKEQLKEIDNP-MIKEV-RGRGLFIGVELNEPARPYCEALK-EEGLLCKETHETVIRFAPPLVITKEELD 385 (396)
T ss_pred HHHHHHHHHHHHHHHHhhcCC-cccce-ecceEEEEEEecchHHHHHHHHH-HCCeEEecCCCCEEEEECCcccCHHHHH
Confidence 456667788888888876432 12222 345776555442 2 3345564 5699997544 45554 68899999
Q ss_pred HHHHHHHhhC
Q psy16707 119 YLAKAIHANG 128 (420)
Q Consensus 119 ~va~ai~~v~ 128 (420)
.++++|.++-
T Consensus 386 ~~~~~l~~~l 395 (396)
T PRK04073 386 WAFEKIKAVL 395 (396)
T ss_pred HHHHHHHHHh
Confidence 9999998763
No 406
>PRK09275 aspartate aminotransferase; Provisional
Probab=77.47 E-value=12 Score=40.83 Aligned_cols=80 Identities=24% Similarity=0.294 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH---------------------HHHHHHHHhcceEE
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA---------------------TQVEKLIKEHSVYL 101 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~---------------------~qv~~L~~~~~IY~ 101 (420)
+++|+++++.-|..|++.| +. .+.....+-|+|.+..+.. +=+.+|-++++|-+
T Consensus 405 ~~~~~~~~~~Rr~~l~~~L---g~--~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v 479 (527)
T PRK09275 405 KKAMKDIIRRRYKALYEGL---GL--PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVL 479 (527)
T ss_pred HHHHHHHHHHHHHHHHHHc---CC--CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEE
Confidence 5567888888899898888 21 2333456777888875532 22568889999987
Q ss_pred cC---------CCceecccCCcCCHHHHHHHHHhh
Q psy16707 102 TK---------DGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 102 ~~---------~GRinvagl~~~ni~~va~ai~~v 127 (420)
++ .-||++|.+++..+..+.+.|.++
T Consensus 480 ~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~ 514 (527)
T PRK09275 480 LPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKL 514 (527)
T ss_pred eCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 62 358898888888888888777765
No 407
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=77.19 E-value=18 Score=36.74 Aligned_cols=83 Identities=14% Similarity=0.325 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--C-CCHH-HHHHHHHhcceEEcC-------CC----
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--G-LNAT-QVEKLIKEHSVYLTK-------DG---- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--g-L~~~-qv~~L~~~~~IY~~~-------~G---- 105 (420)
++.+.++++++..|+.|.+.|++.+ |.....+.+++.+. + ...+ -++.|.+ .+|++.. .|
T Consensus 289 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~i~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~i 363 (393)
T TIGR01822 289 EASNELRDRLWANTRYFRERMEAAG----FDIKPADHPIIPVMLYDAVLAQRFARRLLE-EGIYVTGFFYPVVPKGQARI 363 (393)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHH-CCeeEeeeCCCCCCCCCceE
Confidence 3467789999999999999998753 22222223333332 1 1123 3455654 4899862 13
Q ss_pred ceecccC-CcCCHHHHHHHHHhhC
Q psy16707 106 RISMAGV-TSKNVGYLAKAIHANG 128 (420)
Q Consensus 106 Rinvagl-~~~ni~~va~ai~~v~ 128 (420)
||+++.. +.++|+.++++|.+++
T Consensus 364 Ris~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 364 RVQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHH
Confidence 5566555 5799999999998873
No 408
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=76.38 E-value=11 Score=39.55 Aligned_cols=83 Identities=16% Similarity=0.249 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc----cccccceeec--CCCHHHHHHHHHhcceEEcCC------------
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI----TDQIGMFCYT--GLNATQVEKLIKEHSVYLTKD------------ 104 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i----~~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~------------ 104 (420)
++.|.++.+.+...+.+.|.+... ...+ .++.|+++|. |..++.+..+-.+.+|.+-..
T Consensus 298 ~~~i~~~e~~L~~~~~~~L~~~~~---v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~ 374 (405)
T COG0520 298 MEAIEAHERELTEYLLEGLSELPG---VEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLG 374 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcC
Confidence 568999999999999999986542 1211 3578888775 888888887777777655433
Q ss_pred ----CceecccCCc-CCHHHHHHHHHhhC
Q psy16707 105 ----GRISMAGVTS-KNVGYLAKAIHANG 128 (420)
Q Consensus 105 ----GRinvagl~~-~ni~~va~ai~~v~ 128 (420)
=|+|++=.|+ .+||+++++|+++.
T Consensus 375 ~~~~iR~S~~~YNt~edid~l~~aL~~~~ 403 (405)
T COG0520 375 VDATIRASLHLYNTEEDVDRLLEALKKAL 403 (405)
T ss_pred CCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 3666666665 78999999998763
No 409
>PRK06225 aspartate aminotransferase; Provisional
Probab=76.18 E-value=34 Score=34.64 Aligned_cols=99 Identities=10% Similarity=0.246 Sum_probs=55.4
Q ss_pred chHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHHHHHH
Q psy16707 20 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVEKLI 94 (420)
Q Consensus 20 ~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~qv~~L~ 94 (420)
..+..++...|... .+|.+.++. ..+..|..+.+.|++... ..+.. ....|.|.+. +++.+++...-
T Consensus 259 ~~~~~~a~~~l~~~---~~~~~~~~~---~~~~~~~~l~~~L~~~~~-~~~~~-~~~~g~~~~~~~~~~~~~~~~l~~~l 330 (380)
T PRK06225 259 VIAQEAAIAGLKVK---DEWIDRIRR---TTFKNQKLIKEAVDEIEG-VFLPV-YPSHGNMMVIDISEAGIDPEDLVEYL 330 (380)
T ss_pred HHHHHHHHHHHhcc---hHHHHHHHH---HHHHHHHHHHHHHHhCcC-Ccccc-CCCCCeEEEEEcccccCCHHHHHHHH
Confidence 34445555555431 466655544 444456667777776411 11222 2344655444 34555555433
Q ss_pred HhcceEEcCC-------C----ceecccCCcCCHHHHHHHHHhh
Q psy16707 95 KEHSVYLTKD-------G----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 95 ~~~~IY~~~~-------G----Rinvagl~~~ni~~va~ai~~v 127 (420)
.+++|++.+. | |++++ .++.+++.++++|.++
T Consensus 331 ~~~gi~v~~g~~~~~~~~~~~iR~s~~-~~~e~l~~~~~~l~~~ 373 (380)
T PRK06225 331 LERKIFVRQGTYTSKRFGDRYIRVSFS-IPREQVEVFCEEFPDV 373 (380)
T ss_pred HHCCEEEcCCcccCcCCCCceEEEEeC-CCHHHHHHHHHHHHHH
Confidence 4789988652 2 66765 4677888888888765
No 410
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=76.05 E-value=9.4 Score=39.77 Aligned_cols=53 Identities=15% Similarity=0.127 Sum_probs=35.2
Q ss_pred ccccceeecCC--------CHHHHHHHH---HhcceEEcCCC------ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 75 DQIGMFCYTGL--------NATQVEKLI---KEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 75 ~Q~GmFs~~gL--------~~~qv~~L~---~~~~IY~~~~G------Rinvag-l~~~ni~~va~ai~~v 127 (420)
+..|+|...-| +.+....|. .+++|.+.+.| ||+.+. ++.++++..++.+.++
T Consensus 347 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~ 417 (420)
T TIGR00700 347 RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAI 417 (420)
T ss_pred eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHH
Confidence 45588876644 123334444 57899998754 566554 7888888888887765
No 411
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=75.59 E-value=6.3 Score=41.23 Aligned_cols=82 Identities=5% Similarity=0.081 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC-CCccccccccceeecCCCHH----HHHHHHHhcceEEcCC----Cceecc-c--CC
Q psy16707 46 MADRIISMRQSLKDNLQKEGSNK-PWNHITDQIGMFCYTGLNAT----QVEKLIKEHSVYLTKD----GRISMA-G--VT 113 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~~~~-~w~~i~~Q~GmFs~~gL~~~----qv~~L~~~~~IY~~~~----GRinva-g--l~ 113 (420)
..++++.+++.|.+.|+++.... .+..-.+..|++..+-|.+. ++...-.+.+|++... .||+++ . ++
T Consensus 320 l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t 399 (425)
T PRK09264 320 FEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTID 399 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCC
Confidence 44555556666666555432211 12111345677766666432 2222224568998664 477777 6 77
Q ss_pred cCCHHHHHHHHHhh
Q psy16707 114 SKNVGYLAKAIHAN 127 (420)
Q Consensus 114 ~~ni~~va~ai~~v 127 (420)
.++|+.+.+++.++
T Consensus 400 ~~ei~~~~~~l~~~ 413 (425)
T PRK09264 400 EEELEEGLDILEEA 413 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 88999988888776
No 412
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=75.42 E-value=1.4e+02 Score=35.15 Aligned_cols=82 Identities=16% Similarity=0.143 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHH-HHHHHHhcceEEcCCC----ceecccCCc-C
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ-VEKLIKEHSVYLTKDG----RISMAGVTS-K 115 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~q-v~~L~~~~~IY~~~~G----Rinvagl~~-~ 115 (420)
-++++++|+..+-..|.+.|++.|..-..+ ..-+.|++.-=.+++ +++| .+.+|.+...+ |+|+--.|+ .
T Consensus 379 Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~---~~f~~vt~~~~~~~~v~~~L-~~~gI~l~~~~~~~lrvs~~e~~T~e 454 (993)
T PLN02414 379 GLKTIAQRVHGLAGVFAAGLKKLGFQVQSL---PFFDTVKVKCSDADAIADAA-AKVGINLRVVDANTVTVSFDETTTLE 454 (993)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhcCCccCCC---CCcCeEEEecCCHHHHHHHH-HHCCCeeEEecCCeEEEEeeccCCHH
Confidence 377888999999999999997655322221 224466553214444 4456 56788775332 677777765 6
Q ss_pred CHHHHHHHHHhh
Q psy16707 116 NVGYLAKAIHAN 127 (420)
Q Consensus 116 ni~~va~ai~~v 127 (420)
+||.+++++...
T Consensus 455 dId~L~~~l~~~ 466 (993)
T PLN02414 455 DVDKLFKVFAGG 466 (993)
T ss_pred HHHHHHHHHccc
Confidence 799999999744
No 413
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=75.17 E-value=19 Score=37.04 Aligned_cols=77 Identities=19% Similarity=0.268 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-CC--CHHH-HHHHHHhcceEEcC--------C-C--ceecc-
Q psy16707 47 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-GL--NATQ-VEKLIKEHSVYLTK--------D-G--RISMA- 110 (420)
Q Consensus 47 ~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-gL--~~~q-v~~L~~~~~IY~~~--------~-G--Rinva- 110 (420)
+.|+..++..|.+.|++.+ |..+..+..|+.+. +- ...+ .++|.++++|++.. + + ||++.
T Consensus 301 ~~~~~~~~~~l~~~L~~~g----~~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~ 376 (406)
T PRK13393 301 RERHQDRVARLRARLDKAG----IPHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSP 376 (406)
T ss_pred HHHHHHHHHHHHHHHHHcC----CCcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECC
Confidence 4566777888888887653 33343344444332 21 1123 34576778999842 1 3 45544
Q ss_pred cCCcCCHHHHHHHHHhh
Q psy16707 111 GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 111 gl~~~ni~~va~ai~~v 127 (420)
..+..++|.++++|.++
T Consensus 377 ~~t~edid~l~~~l~~~ 393 (406)
T PRK13393 377 LHTDADIEHLVQALSEI 393 (406)
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 34778999999999987
No 414
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=75.07 E-value=24 Score=36.06 Aligned_cols=106 Identities=15% Similarity=0.142 Sum_probs=66.5
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc-cceeecCCCH--
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLT---EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI-GMFCYTGLNA-- 87 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~---el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~-GmFs~~gL~~-- 87 (420)
.+.+||.++..-...-|. |.. -++.+.+|-+.+.+.|++.|++.+.-+....-..+. ...+|.--..
T Consensus 235 ~~~Tp~~~~i~aL~~aL~-------~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~ 307 (360)
T PRK05355 235 MYNTPPTFAIYLAGLVFK-------WLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEEL 307 (360)
T ss_pred ccCCCcHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHH
Confidence 467899998887776665 332 278999999999999999999877211111101233 4577762221
Q ss_pred -HHH-HHHHHhcceEE--c----CCCceecccCC-cCCHHHHHHHHHhh
Q psy16707 88 -TQV-EKLIKEHSVYL--T----KDGRISMAGVT-SKNVGYLAKAIHAN 127 (420)
Q Consensus 88 -~qv-~~L~~~~~IY~--~----~~GRinvagl~-~~ni~~va~ai~~v 127 (420)
+++ ..++ +++|+. . ..=|+|+.+-| ..+||++.+++.++
T Consensus 308 ~~~~~~~~~-~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~ 355 (360)
T PRK05355 308 DKKFLAEAK-AAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEF 355 (360)
T ss_pred HHHHHHHHH-HCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHH
Confidence 333 3433 234443 2 11367765554 58999999999875
No 415
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=74.82 E-value=6.9 Score=41.11 Aligned_cols=44 Identities=18% Similarity=0.185 Sum_probs=32.3
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH----HHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP----ICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~----i~~~aG~~ 298 (420)
+.+.+|+.|+.+++..+ +.| ||.|++++|+|+.-.. .++..|++
T Consensus 82 l~~~SG~~Ai~~al~al--l~p-Gd~VIv~~~~y~~t~~~~~~~~~~~G~~ 129 (427)
T PRK05994 82 LAVASGHAAQFLVFHTL--LQP-GDEFIAARKLYGGSINQFGHAFKSFGWQ 129 (427)
T ss_pred EEEcCHHHHHHHHHHHH--hCC-CCEEEEecCcchhHHHHHHHHHHhcCcE
Confidence 67899999999887644 457 9999999999985433 24445553
No 416
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=74.77 E-value=12 Score=37.83 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-C--CCHH-HHHHHHHhcceEEcCC-------C----ce
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-G--LNAT-QVEKLIKEHSVYLTKD-------G----RI 107 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-g--L~~~-qv~~L~~~~~IY~~~~-------G----Ri 107 (420)
.+.++++++.+|+.+.+.|++.+ |..+....++|... + .+.+ =++.|.++ +|.+... | ||
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi 369 (397)
T PRK06939 295 SDELRDRLWENARYFREGMTAAG----FTLGPGEHPIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRT 369 (397)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEE
Confidence 45788889999999999998763 33333334555332 1 2223 35667666 8887531 2 45
Q ss_pred eccc-CCcCCHHHHHHHHHhh
Q psy16707 108 SMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 108 nvag-l~~~ni~~va~ai~~v 127 (420)
+++. .+...|+.++++|.++
T Consensus 370 ~~~~~~~~~~i~~~l~~L~~~ 390 (397)
T PRK06939 370 QMSAAHTKEQLDRAIDAFEKV 390 (397)
T ss_pred EECCCCCHHHHHHHHHHHHHH
Confidence 5654 7788899999888876
No 417
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=74.53 E-value=24 Score=35.53 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=65.1
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHH-HHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQV-EKL 93 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~qv-~~L 93 (420)
+++.....++..+|.+. .|.+++ +++++..|..|.+.|++.. .|.. ..+.|+|.+.-++ .+++ +.|
T Consensus 246 ~~s~~~q~~~~~~l~~~----~~~~~~---~~~~~~~r~~l~~~L~~~~---~~~~-~~~~~~fl~~~~~~~~~~l~~~l 314 (360)
T PRK07392 246 PVNGLAAAAAIAALADR----DFQQQT---WAWLPPAREALFQGLASLP---GLTP-LPSAANFLLVQSQGSALQLQEKL 314 (360)
T ss_pred CCCHHHHHHHHHHhccH----HHHHHH---HHHHHHHHHHHHHHHHhCC---CcEE-CCCCCCEEEEEcCCCHHHHHHHH
Confidence 45666778888888864 466554 3467778888999997642 2443 3477999887664 3444 455
Q ss_pred HHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhhC
Q psy16707 94 IKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 94 ~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v~ 128 (420)
.++++|.+.+. | ||+++. +.+-+.+.+++..+.
T Consensus 315 l~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~ 357 (360)
T PRK07392 315 LQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAIL 357 (360)
T ss_pred HhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 67889988532 2 566554 344578888887763
No 418
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=74.34 E-value=12 Score=39.30 Aligned_cols=52 Identities=17% Similarity=0.181 Sum_probs=34.6
Q ss_pred CCceEEecCCC-----------HHHHHHHHHhCCeEEeCCC------cEE--EcccCCCCHHHHHHHHHHHh
Q psy16707 367 QIGMFCYTGLN-----------ATQVEKLIKEHSVYLTKDG------RIS--MAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 367 q~GmF~~~~l~-----------~~~v~~Ll~e~~Vy~~p~g------Ris--~agl~~~ni~~la~AI~~vv 419 (420)
..|+|.++-+. ...+...+.+.||++.+.| ||. ++ +++++++.+.+++++++
T Consensus 349 G~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~-it~~~id~~~~~l~~~l 419 (425)
T PRK07495 349 GPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPIT-IQDDVFAEALDILEASI 419 (425)
T ss_pred cCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCc-cCHHHHHHHHHHHHHHH
Confidence 45899876431 1233333458999996532 444 32 68899999999998876
No 419
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=74.29 E-value=9 Score=41.60 Aligned_cols=80 Identities=18% Similarity=0.231 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH---------------------HHHHHHHHhcceEE
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA---------------------TQVEKLIKEHSVYL 101 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~---------------------~qv~~L~~~~~IY~ 101 (420)
+++|+++++.-|..|++.| |. .+.....+-|+|.+.-+.+ +=+.+|-++++|-+
T Consensus 404 ~~~~~~~~~~R~~~l~~~L---g~--~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v 478 (521)
T TIGR03801 404 KAETKDICRRREKLLFRGL---GL--PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVL 478 (521)
T ss_pred HHHHHHHHHHHHHHHHHhc---CC--CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEE
Confidence 4556778888899999888 22 2334456788999987753 23456888999987
Q ss_pred cC---------CCceecccCCcCCHHHHHHHHHhh
Q psy16707 102 TK---------DGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 102 ~~---------~GRinvagl~~~ni~~va~ai~~v 127 (420)
++ +.||++|.+++..+..+.+.|.++
T Consensus 479 ~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~ 513 (521)
T TIGR03801 479 LPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKI 513 (521)
T ss_pred eCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 43 368999999998888888887765
No 420
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=74.06 E-value=24 Score=35.92 Aligned_cols=106 Identities=18% Similarity=0.255 Sum_probs=66.7
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHhcC-CCCCCccccccc-cceeec----
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLT-E--VKGMADRIISMRQSLKDNLQKEG-SNKPWNHITDQI-GMFCYT---- 83 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~-e--l~~m~~Ri~~~R~~l~~~L~~~~-~~~~w~~i~~Q~-GmFs~~---- 83 (420)
..+.+||.++..-....|. |.. | ++.+.+|-+.+.+.|++.|++.+ -......-..+. ..++|.
T Consensus 223 ~~~~Tp~~~~i~al~~al~-------~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~ 295 (349)
T TIGR01364 223 SMYNTPPTFAIYVSGLVFK-------WLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE 295 (349)
T ss_pred CCCCCCcHHHHHHHHHHHH-------HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh
Confidence 3456889888777666654 333 2 89999999999999999999874 211111001133 346666
Q ss_pred CCCHHHH-HHHHHhcceEEcCC------CceecccC-CcCCHHHHHHHHHhh
Q psy16707 84 GLNATQV-EKLIKEHSVYLTKD------GRISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 gL~~~qv-~~L~~~~~IY~~~~------GRinvagl-~~~ni~~va~ai~~v 127 (420)
++. ++. ..+ .+.+|++... =|+++.+- +..+||++.+++.++
T Consensus 296 ~~~-~~~~~~~-~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~ 345 (349)
T TIGR01364 296 ELE-KRFLKEA-EERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEF 345 (349)
T ss_pred hHh-HHHHHHH-HHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHH
Confidence 232 333 444 3466655333 26776555 458999999999875
No 421
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=73.80 E-value=3.8 Score=42.12 Aligned_cols=52 Identities=12% Similarity=0.195 Sum_probs=33.6
Q ss_pred CCCCceEEecCCCH---HHHHHHHHhCCeEEeCCC---------cEEEcccCCCCHHHHHHHHHH
Q psy16707 365 TDQIGMFCYTGLNA---TQVEKLIKEHSVYLTKDG---------RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 365 ~~q~GmF~~~~l~~---~~v~~Ll~e~~Vy~~p~g---------Ris~agl~~~ni~~la~AI~~ 417 (420)
..+...|.|+.+.. +.|..++++++|-.-.|. |||+- -++++.+.|.+.+..
T Consensus 298 ~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml-~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 298 REPSPAFAWLKCEREEDEDCYAVLREAKIITRSGVLFGADSRYVRLSML-KRDDDFDQLLERLSK 361 (363)
T ss_dssp EE---SEEEEEESSCGGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESS-S-HHHHHHHHHHHHC
T ss_pred cCCCCCeEEEecCCcccccHHHHHHhCCcccCCCCccCCCCCeEEEecc-CCHHHHHHHHHHHHh
Confidence 33578899987763 468888899999987652 99987 455555555555443
No 422
>PRK08297 L-lysine aminotransferase; Provisional
Probab=73.46 E-value=12 Score=39.45 Aligned_cols=51 Identities=22% Similarity=0.385 Sum_probs=35.1
Q ss_pred CCceEEecCCC-----HHHHHHHHHhCCeEEeCCC----cE--EEcccCCCCHHHHHHHHHHHh
Q psy16707 367 QIGMFCYTGLN-----ATQVEKLIKEHSVYLTKDG----RI--SMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 367 q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~g----Ri--s~agl~~~ni~~la~AI~~vv 419 (420)
..|++..+-+. ...++.|+ ++||++.|.| || +++ ++++.|+++.+++.+++
T Consensus 378 g~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~~~~~~~~lr~~P~l~-~t~~eid~~l~~l~~~l 439 (443)
T PRK08297 378 GRGLMCAFDLPTTADRDEVIRRLW-EEGVLVLPCGERSIRFRPALT-VTTEEIDAAIDALRRAL 439 (443)
T ss_pred ccceEEEEEecCHHHHHHHHHHHH-HCCEEEecCCCCeEEEECCcc-CCHHHHHHHHHHHHHHH
Confidence 45666644332 13345554 8999998865 55 444 78999999999998875
No 423
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=73.28 E-value=8 Score=41.36 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=29.3
Q ss_pred HHHHHhCCeEEeCCC----cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 382 EKLIKEHSVYLTKDG----RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 382 ~~Ll~e~~Vy~~p~g----Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
+.| .+.||++.|.+ -++++ .++++|+++.++++++++
T Consensus 432 ~~l-~~~Gv~~~~~~~~~~~psl~-ht~~dId~~l~al~~~l~ 472 (474)
T PLN02482 432 RGM-LEEGVYLAPSQFEAGFTSLA-HTEEDIDFTIAAAERVLA 472 (474)
T ss_pred HHH-HHCCeEEeccCCCCCcCCCC-CCHHHHHHHHHHHHHHHH
Confidence 444 57899999864 36766 799999999999998863
No 424
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=73.17 E-value=17 Score=36.72 Aligned_cols=82 Identities=10% Similarity=0.159 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCCCCCcccc----ccccce--eecCCCHHHHHHHHHhcceEEcC------------
Q psy16707 43 VKGMADRIISMRQSLKDNLQK-EGSNKPWNHIT----DQIGMF--CYTGLNATQVEKLIKEHSVYLTK------------ 103 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~-~~~~~~w~~i~----~Q~GmF--s~~gL~~~qv~~L~~~~~IY~~~------------ 103 (420)
++.+.+|+..+|..|.+.|.+ .. + +.... ...|.+ .+.+.+++++...-++++|.+..
T Consensus 253 ~~~~~~~~~~l~~~l~~~l~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~ 329 (379)
T TIGR03402 253 LEEENTRVRALRDRLEAGLLARIP--D-ARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPS 329 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCC--C-EEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcC
Confidence 566678999999999999874 21 1 11111 112444 55788888887655788998752
Q ss_pred ---------------CCceecccCC-cCCHHHHHHHHHhh
Q psy16707 104 ---------------DGRISMAGVT-SKNVGYLAKAIHAN 127 (420)
Q Consensus 104 ---------------~GRinvagl~-~~ni~~va~ai~~v 127 (420)
.=|+|+...| .++||+++++|.++
T Consensus 330 ~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~ 369 (379)
T TIGR03402 330 HVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPI 369 (379)
T ss_pred HHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 2367777654 47888888888775
No 425
>COG0155 CysI Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]
Probab=73.13 E-value=13 Score=40.40 Aligned_cols=100 Identities=17% Similarity=0.197 Sum_probs=73.8
Q ss_pred HHHHHHHHHHH----hcCCCCCCccccccccceee--------------cCCCHHHHHHHHH---h---cceEEcCCCce
Q psy16707 52 SMRQSLKDNLQ----KEGSNKPWNHITDQIGMFCY--------------TGLNATQVEKLIK---E---HSVYLTKDGRI 107 (420)
Q Consensus 52 ~~R~~l~~~L~----~~~~~~~w~~i~~Q~GmFs~--------------~gL~~~qv~~L~~---~---~~IY~~~~GRi 107 (420)
.+|..+.+.+. ..-++.+|..+.++.|+|.- =.||++|...|-+ + ..+.+|.-+-|
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~q~~~~~~MlRvriPgG~ls~~q~r~l~~iA~~yg~g~~~iTtRQni 97 (510)
T COG0155 18 FLRGTIEDQLSDRLSGGLCEDDFRPLLKFDGLYLQEPDHAFMLRVRIPGGILSPKQLRALADIARRYGRGTIELTTRQNI 97 (510)
T ss_pred hhHHHHHHHhhhccccCCCHHHHHHHHhhcceeecccccceeEEEecCCCccCHHHHHHHHHHHHHhCCCeEEEeecccc
Confidence 44555554444 33456778888889999888 3799999887743 2 45788888889
Q ss_pred ecccCCcCCHHHHHHHHHhhCCCcccchhhhccccCCChHHHHH
Q psy16707 108 SMAGVTSKNVGYLAKAIHANGSLPIRFQDARTSSVKVPSSNLLT 151 (420)
Q Consensus 108 nvagl~~~ni~~va~ai~~v~~~p~~~~~~~~~~~~~d~i~~l~ 151 (420)
.+=|+-.+|++.+.+.+++||..++.-+-....++..||.-++.
T Consensus 98 Q~hgI~~~d~~~i~~~l~~vgl~ti~~~gd~~Rnv~~~P~ag~~ 141 (510)
T COG0155 98 QFHGIRKKDVPEILAELASVGLHTIATAGDVARNVTGDPLAGLD 141 (510)
T ss_pred eecccccccHHHHHHHHHHcCCcchhhccccccceecCcccccc
Confidence 99999999999999999999998887555534455556655443
No 426
>PRK06434 cystathionine gamma-lyase; Validated
Probab=73.11 E-value=8 Score=40.21 Aligned_cols=38 Identities=18% Similarity=0.167 Sum_probs=30.2
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.+.+|+.|+.+++..+ +.| ||.|+++++.|++....+
T Consensus 83 v~~sSG~aAi~~al~al--l~~-GD~Vl~~~~~yg~t~~~~ 120 (384)
T PRK06434 83 LSFSSGMGAITSAILSL--IKK-GKRILSISDLYGQTFYFF 120 (384)
T ss_pred EEeCCHHHHHHHHHHHH--hCC-CCEEEEecCccchHHHHH
Confidence 67999999999887644 557 999999998777766443
No 427
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=72.94 E-value=6.6 Score=41.01 Aligned_cols=44 Identities=18% Similarity=0.181 Sum_probs=31.9
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH----HHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP----ICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~----i~~~aG~~ 298 (420)
+.+.+|+.|+..++..+ +.| ||.|++++|.|+.... .++..|++
T Consensus 76 v~~~sG~~Ai~~al~~l--~~~-Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 123 (418)
T TIGR01326 76 LAVASGQAAITYAILNL--AQA-GDNIVSSSYLYGGTYNLFKHTLKRLGIE 123 (418)
T ss_pred EEEccHHHHHHHHHHHH--hCC-CCEEEEECCCcHHHHHHHHHHHHHcCcE
Confidence 67999999998887544 447 9999999999865433 23445554
No 428
>PRK05839 hypothetical protein; Provisional
Probab=72.32 E-value=32 Score=35.02 Aligned_cols=70 Identities=7% Similarity=0.069 Sum_probs=42.5
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHHHHHHH
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIK 95 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~qv~~L~~ 95 (420)
.|.-....+...|.++ .|. +.++++++..|..+.+.|. . . ..+-|+|.+.-+. .+-+++|.+
T Consensus 265 ~~~~~q~~~~~~l~~~----~~~---~~~~~~~~~~~~~~~~~l~---~----~--~p~gg~fi~~~~~~~~~~~~~l~~ 328 (374)
T PRK05839 265 SPLPLQKAAAVAWLDD----EHA---EFFRNIYAKNLKLAREILG---I----T--IPPATFYVWLPVDNDEEFTKKLYQ 328 (374)
T ss_pred CChHHHHHHHHHhccc----hHH---HHHHHHHHHHHHHHHHhcC---C----C--CCCeeEEEEEeCCChHHHHHHHHH
Confidence 3444444455566553 343 3345566666666666552 1 1 3467999998774 455577777
Q ss_pred hcceEEcC
Q psy16707 96 EHSVYLTK 103 (420)
Q Consensus 96 ~~~IY~~~ 103 (420)
+++|++.+
T Consensus 329 ~~gi~v~p 336 (374)
T PRK05839 329 NEGIKVLP 336 (374)
T ss_pred HCCEEEeC
Confidence 79998876
No 429
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=72.23 E-value=11 Score=39.80 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=28.7
Q ss_pred HHHHHHhCCeEEeCCC--c--EEEcccCCCCHHHHHHHHHHHh
Q psy16707 381 VEKLIKEHSVYLTKDG--R--ISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 381 v~~Ll~e~~Vy~~p~g--R--is~agl~~~ni~~la~AI~~vv 419 (420)
...| .++||++.|.. . ||.+ -+++.|+++.+++++++
T Consensus 386 ~~~l-~~~Gv~~~~~~~~~~~ls~~-ht~~did~~~~a~~~~~ 426 (433)
T PRK00615 386 YQSA-FSKGVYLSPSPFEASFLSSA-HSMENLDYAQNVLIDSL 426 (433)
T ss_pred HHHH-HHCCeeecCccccccceecC-CCHHHHHHHHHHHHHHH
Confidence 3455 57899999864 3 5655 58999999999999986
No 430
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=72.13 E-value=34 Score=35.46 Aligned_cols=110 Identities=19% Similarity=0.279 Sum_probs=70.9
Q ss_pred hhhccCCCchHHHHHHHHHhCChhhHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC---ceEEec-
Q psy16707 302 IRAFYSSPPIHGARIVQEILGDPKLKAQWLTE---VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI---GMFCYT- 374 (420)
Q Consensus 302 ~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e---l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~---GmF~~~- 374 (420)
.-++|.+||.+.-.....+| +|.++ |+.|.+|-++.-+.|++.+++.+.=.+...-...+ +-|-+.
T Consensus 237 ~~s~yNTPptfa~y~~~lv~-------~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~ 309 (365)
T COG1932 237 NGSMYNTPPTFAWYLLGLVF-------KWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVD 309 (365)
T ss_pred cCCccCCcHHHHHHHHHHHH-------HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCc
Confidence 46789999998888665543 57654 67888888889999999998876321111111122 223322
Q ss_pred -CCCHHHHHHHHHhCCeEEe----CCC-cEEE-cccCCCCHHHHHHHHHHH
Q psy16707 375 -GLNATQVEKLIKEHSVYLT----KDG-RISM-AGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 375 -~l~~~~v~~Ll~e~~Vy~~----p~g-Ris~-agl~~~ni~~la~AI~~v 418 (420)
.++..++..+.++..+++. ++| |+|+ ..++.+.++-|+.-++..
T Consensus 310 ~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f 360 (365)
T COG1932 310 AELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWF 360 (365)
T ss_pred HHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHH
Confidence 3456778777555555552 344 9986 456778888888777664
No 431
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=72.12 E-value=15 Score=36.73 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHHHHHHHHhcceEEcCC-----CceecccC-C
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD-----GRISMAGV-T 113 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~qv~~L~~~~~IY~~~~-----GRinvagl-~ 113 (420)
+.++.+.+|+..+|..|.+.|++++.. ..+..+..+.++..-+ .+-.++|.+ .+|++... =||++.+. +
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~v~~~~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~~~~t 359 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKIGFE---PVIEPVLNIVAFEVDDPEEVRKKLRD-RGWYVSVTRCPKALRIVVMPHVT 359 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCe---EEcCCCceEEEEEeCCHHHHHHHHHH-CCceeccCCCCCEEEEEEECCCC
Confidence 356778899999999999999887421 1122334444443222 345556754 48888643 36666554 6
Q ss_pred cCCHHHHHHHHHh
Q psy16707 114 SKNVGYLAKAIHA 126 (420)
Q Consensus 114 ~~ni~~va~ai~~ 126 (420)
.+++++++++|.+
T Consensus 360 ~edid~l~~~L~~ 372 (373)
T TIGR03812 360 REHIEEFLEDLKE 372 (373)
T ss_pred HHHHHHHHHHHhh
Confidence 7899999999875
No 432
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=72.00 E-value=11 Score=40.14 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=48.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707 195 LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG 274 (420)
Q Consensus 195 ~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~ 274 (420)
.+..|........|-++++++ +|.. .+ +.|.+||.|++++.. ..+.|
T Consensus 63 GDe~yag~~s~~~lE~~va~~-~G~~-------~a----------------------v~v~sGT~Al~ll~~--l~l~p- 109 (450)
T TIGR02618 63 GDEAYAGSRNFYHLERTVREL-YGFK-------YV----------------------VPTHQGRGAENLLSQ--IAIKP- 109 (450)
T ss_pred cchhhcCCCcHHHHHHHHHHH-HCCC-------eE----------------------EEcCCHHHHHHHHHH--hCCCC-
Confidence 344688777778999988885 4643 12 679999999998653 34567
Q ss_pred CCEEEEcCCCC-CCcHHHHhhcCc
Q psy16707 275 EKVIYVPTPTW-GNHIPICKHTGL 297 (420)
Q Consensus 275 gd~VlvpdP~w-~ny~~i~~~aG~ 297 (420)
||+| |.|+| ..+...++.+|+
T Consensus 110 GDeV--psn~~f~Tt~ahIe~~Ga 131 (450)
T TIGR02618 110 GDYV--PGNMYFTTTRYHQEKNGA 131 (450)
T ss_pred cCEE--CCceeHHHHHHHHHhCCe
Confidence 9987 77777 555555676766
No 433
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=71.86 E-value=16 Score=38.57 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=28.9
Q ss_pred HHHHHH---HhcceEEcCCC------ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 89 QVEKLI---KEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 qv~~L~---~~~~IY~~~~G------Rinvag-l~~~ni~~va~ai~~v 127 (420)
..+.+. .+++|++.+.| ||..+. ++..+|+...++|.++
T Consensus 392 ~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~ 440 (451)
T PRK06918 392 LTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEES 440 (451)
T ss_pred HHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHH
Confidence 344454 67899998754 566665 8899999999888776
No 434
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=71.80 E-value=38 Score=35.35 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CCCHHHH-HHHHHhcceEEcCCC--------------ceec
Q psy16707 47 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNATQV-EKLIKEHSVYLTKDG--------------RISM 109 (420)
Q Consensus 47 ~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--gL~~~qv-~~L~~~~~IY~~~~G--------------Rinv 109 (420)
++|+...-+.|.+.|++.|.+--...-....+...+- +.+.+.+ ++| ++.+||+...+ |+++
T Consensus 288 ~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~ 366 (416)
T PRK13034 288 AKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGT 366 (416)
T ss_pred HHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCc
Confidence 3455555555555565554221100001233444443 5677777 556 66799997532 4443
Q ss_pred c-----cCCcCCHHHHHHHHHhh
Q psy16707 110 A-----GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 110 a-----gl~~~ni~~va~ai~~v 127 (420)
. |.++++|+.++++|.++
T Consensus 367 ~~~t~~~~~~~di~~l~~~l~~~ 389 (416)
T PRK13034 367 PAGTTRGFGEAEFREIANWILDV 389 (416)
T ss_pred HHHHhCCCCHHHHHHHHHHHHHH
Confidence 2 77789999999999988
No 435
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=71.55 E-value=16 Score=38.16 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC------HHHHHHHHHhcceEEcCCCc--eec---ccCCcC
Q psy16707 47 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------ATQVEKLIKEHSVYLTKDGR--ISM---AGVTSK 115 (420)
Q Consensus 47 ~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~------~~qv~~L~~~~~IY~~~~GR--inv---agl~~~ 115 (420)
.++++.+-+.|.+.|+++....++-.-.+..|++.-.=+. ..++...-.+++|++...|. |-+ ..++..
T Consensus 309 ~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~e 388 (408)
T PRK04612 309 AANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDA 388 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHH
Confidence 4444444455555554443322222224455654443332 22333333578999987763 333 268889
Q ss_pred CHHHHHHHHHhh
Q psy16707 116 NVGYLAKAIHAN 127 (420)
Q Consensus 116 ni~~va~ai~~v 127 (420)
+|+.+.++|.++
T Consensus 389 eid~~l~~l~~~ 400 (408)
T PRK04612 389 ELADGLARLRLA 400 (408)
T ss_pred HHHHHHHHHHHH
Confidence 999999998776
No 436
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=71.41 E-value=21 Score=37.62 Aligned_cols=79 Identities=13% Similarity=0.273 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CHHHHHHHHHhCCeEEeCCC---cE--EEcccCCCCHH
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVEKLIKEHSVYLTKDG---RI--SMAGVTSKNVG 409 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~~~v~~Ll~e~~Vy~~p~g---Ri--s~agl~~~ni~ 409 (420)
++.+++-+.|.+.|+++. ..++-.-....|++.-+-+ ....+...+.+.||++.+.| |+ .++ +++++|+
T Consensus 334 ~~~~~~g~~l~~~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g~~i~~~Ppl~-it~~ei~ 411 (428)
T PRK07986 334 QQVAAIEAQLREELAPLR-DAPMVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFGKLIYLMPPYI-ILPEQLQ 411 (428)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCCEEeEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEecCCEEEEeCCCC-CCHHHHH
Confidence 344444444555555442 1111111334577664322 23344334468999999876 45 344 7899999
Q ss_pred HHHHHHHHHh
Q psy16707 410 YLAKAIHAVT 419 (420)
Q Consensus 410 ~la~AI~~vv 419 (420)
.+.+++.+++
T Consensus 412 ~~~~~l~~~l 421 (428)
T PRK07986 412 RLTAAVNRAV 421 (428)
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 437
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=71.17 E-value=17 Score=37.12 Aligned_cols=83 Identities=14% Similarity=0.160 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHH-HHHHHHHhcceEEcCCC----ceecc
Q psy16707 38 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NAT-QVEKLIKEHSVYLTKDG----RISMA 110 (420)
Q Consensus 38 ~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~-qv~~L~~~~~IY~~~~G----Rinva 110 (420)
.|.+.++.+.+++.+.++.+.+.+ ++-+..+ +..|+|...-+ +.+ =++.|.++ +|++.+.| ||+.+
T Consensus 295 ~~~~~~~~~~~~l~~~l~~l~~~~-----~~~~~~v-~g~G~~~~i~~~~~~~~~~~~l~~~-GV~~~p~~~~~lR~~p~ 367 (389)
T PRK01278 295 GFLDNVQRMGLYLKQKLEGLVDRF-----PDVIEEV-RGKGLLLGLKCVVPNRDLVQALRDE-GLLTVGAGDNVVRLLPP 367 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-----CCceeeE-ecccEEEEEEEecCHHHHHHHHHHC-CeEEeecCCCEEEEeCC
Confidence 355666666666665555443221 1123332 34566543322 233 34566655 99998654 45543
Q ss_pred -cCCcCCHHHHHHHHHhh
Q psy16707 111 -GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 111 -gl~~~ni~~va~ai~~v 127 (420)
.++..+|+..++.|.++
T Consensus 368 ~~~~~~~i~~~l~~l~~~ 385 (389)
T PRK01278 368 LIITEEEIDEALERLERA 385 (389)
T ss_pred cccCHHHHHHHHHHHHHH
Confidence 57888999999988775
No 438
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=71.13 E-value=53 Score=33.32 Aligned_cols=97 Identities=15% Similarity=0.204 Sum_probs=59.1
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHHHHHH
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVEKL 93 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~qv~~L 93 (420)
.|...-.++...|++. +.|.+.++.. .+. |..|.+.|+++ ++ |. +..+.|+|.+.-+ +.+.+...
T Consensus 265 ~~~~~q~a~~~~l~~~---~~~~~~~~~~---~~~-r~~l~~~L~~~--~~-~~-~~p~~g~f~~~~l~~~~~~~~~~~~ 333 (374)
T PRK02610 265 LPSFSQLAAQLALEHR---QELLAAIPEI---LQE-RDRLYQALQEL--PQ-LR-VWPSAANFLYLRLSQDAALAALHQA 333 (374)
T ss_pred CCHHHHHHHHHHhcCH---HHHHHHHHHH---HHH-HHHHHHHHHhC--CC-cE-eCCCcceEEEEeCCCCCCHHHHHHH
Confidence 4555666777788763 4566555543 233 67788888764 22 54 3468899988755 33444433
Q ss_pred HHhcceEEcC-C--CceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTK-D--GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~-~--GRinvagl~~~ni~~va~ai~~v 127 (420)
-.+++|.+.. + =||+++. +..++...+.|.++
T Consensus 334 l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~ 368 (374)
T PRK02610 334 LKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAA 368 (374)
T ss_pred HHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHH
Confidence 3678888763 2 3777764 34456666666654
No 439
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=70.84 E-value=15 Score=38.37 Aligned_cols=54 Identities=7% Similarity=0.086 Sum_probs=35.6
Q ss_pred cccccceeecCCCHH----HHHHHHHhcceEEcCCC------ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 74 TDQIGMFCYTGLNAT----QVEKLIKEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 74 ~~Q~GmFs~~gL~~~----qv~~L~~~~~IY~~~~G------Rinvag-l~~~ni~~va~ai~~v 127 (420)
....|+|.-+-|.+. ++...-.+++|++...| ||..+- ++..+++.+.++++++
T Consensus 345 vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~ 409 (412)
T TIGR02407 345 VRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQA 409 (412)
T ss_pred eecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 346778876666432 22222346799997665 665554 6778899999988875
No 440
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=70.82 E-value=11 Score=39.72 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=27.2
Q ss_pred HHHHHhCCeEEeCC-C---cE--EEcccCCCCHHHHHHHHHHHh
Q psy16707 382 EKLIKEHSVYLTKD-G---RI--SMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 382 ~~Ll~e~~Vy~~p~-g---Ri--s~agl~~~ni~~la~AI~~vv 419 (420)
..| .++||++.+. + || +++ +++++|+++.+++.+++
T Consensus 383 ~~l-~~~Gi~~~~~~~~~lr~~P~l~-~t~~~id~~~~~l~~~l 424 (443)
T PRK08360 383 WRA-WELGLIVTFFSGNVLRIQPPLT-IEKEVLDEGLDILEEAI 424 (443)
T ss_pred HHH-HHCCeEEeecCCCEEEEeCCCC-CCHHHHHHHHHHHHHHH
Confidence 444 6899998763 2 67 544 68889999999998875
No 441
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=70.08 E-value=16 Score=38.19 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--------HHHHHHH---HHhcceEEcCCC------ce
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------ATQVEKL---IKEHSVYLTKDG------RI 107 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--------~~qv~~L---~~~~~IY~~~~G------Ri 107 (420)
.+.++++.++..|.+.|+++.....+-.-.+..|+|...-+. .+-...| -.+.+|++.+.| ||
T Consensus 318 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~ 397 (421)
T PRK06777 318 KLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRF 397 (421)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEE
Confidence 466677777777777777653322222224566666553222 1223333 235889998764 33
Q ss_pred ecc-cCCcCCHHHHHHHHHhh
Q psy16707 108 SMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 108 nva-gl~~~ni~~va~ai~~v 127 (420)
.-+ -++..+++..++.|.++
T Consensus 398 ~ppl~i~~~~i~~~~~~l~~~ 418 (421)
T PRK06777 398 LYPLTIPDAQFSKALNILTRL 418 (421)
T ss_pred eCCCCCCHHHHHHHHHHHHHH
Confidence 332 37888898888888765
No 442
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=70.07 E-value=20 Score=37.15 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH---HHHHHHHHhC---CeEEeCC-C---cEEEcc-cCCC
Q psy16707 338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA---TQVEKLIKEH---SVYLTKD-G---RISMAG-VTSK 406 (420)
Q Consensus 338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~---~~v~~Ll~e~---~Vy~~p~-g---Ris~ag-l~~~ 406 (420)
.++++++-+.|.+.|+++.....+.. ....|++.-+-+.. ..+.....+. ||++.+. + ||+..- ++++
T Consensus 300 ~~~~~~~g~~l~~~L~~l~~~~~i~~-vrG~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ 378 (395)
T PRK03715 300 LEGVRARGEYLKEKLLELSEERGLEG-ERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTE 378 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcCe-EEcceeEEEEEecCchHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHH
Confidence 34555555555566655422111222 23456666443322 3343333455 9999643 2 776653 4788
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
+|+.+.+++.+++
T Consensus 379 ei~~~~~~l~~~l 391 (395)
T PRK03715 379 EIDQMIAMLRSVL 391 (395)
T ss_pred HHHHHHHHHHHHH
Confidence 8999999998875
No 443
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=69.92 E-value=34 Score=34.17 Aligned_cols=79 Identities=19% Similarity=0.162 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHH-HHHHHHhcceEEcCC--------C--ceec
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQ-VEKLIKEHSVYLTKD--------G--RISM 109 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~q-v~~L~~~~~IY~~~~--------G--Rinv 109 (420)
-++.++++++..|+.|.+.|++.+ |..+....|+|-+.-+ +.++ .+.|. +++|.+.+. | ||++
T Consensus 240 ~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~g~f~~~~~~~~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis~ 314 (332)
T PRK06425 240 VAKHSLDIMENERSYLINNLEAMG----FRAAGDPSANFITFMIPDAHDFYSYLL-KNGILVRLLDDYECLGEQYIRIAI 314 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC----CEECCCCCceEEEEEcCCHHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEe
Confidence 356778899999999999998763 5444445678877665 3343 45665 468887532 2 6666
Q ss_pred ccCCcCCHHHHHHHHHhh
Q psy16707 110 AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 110 agl~~~ni~~va~ai~~v 127 (420)
+. ....+++.+|+.++
T Consensus 315 ~~--~~~~~~l~~al~~~ 330 (332)
T PRK06425 315 RR--RSFNIKLVNALRNF 330 (332)
T ss_pred CC--HHHHHHHHHHHHHH
Confidence 54 57888999998764
No 444
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=69.80 E-value=17 Score=37.43 Aligned_cols=81 Identities=11% Similarity=0.106 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCC-CccccccccceeecCC-------CHHHHHHHHHhcceEEcCCC--ceec---cc
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKP-WNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG--RISM---AG 111 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~-w~~i~~Q~GmFs~~gL-------~~~qv~~L~~~~~IY~~~~G--Rinv---ag 111 (420)
++.++++.+++.|.+.|++++.... |.. .+..|++.-.-+ ..+-++.| .+++|++...| +|-+ ..
T Consensus 299 ~l~~~~~~~~~~l~~~L~~l~~~~~~~~~-vrg~G~~~~i~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~~lR~~p~~~ 376 (397)
T TIGR03246 299 ELLAGVKQRHDLFVDGLEKINARYNVFSE-IRGKGLLIGAVLTEAYQGKAKQFVNAA-AEEGVIALIAGPNVVRFAPSLV 376 (397)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCeEe-eecCceEEEEEEcCchhhHHHHHHHHH-HHCCeEEeecCCCEEEEeCCCC
Confidence 3456666677777777766543222 222 234555443222 22334455 45688887544 4444 45
Q ss_pred CCcCCHHHHHHHHHhh
Q psy16707 112 VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 112 l~~~ni~~va~ai~~v 127 (420)
++..+|+.+++++.++
T Consensus 377 ~t~~~i~~~~~~l~~~ 392 (397)
T TIGR03246 377 ISDDDIDEGLARFERA 392 (397)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 7788999999888765
No 445
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=69.54 E-value=21 Score=37.58 Aligned_cols=84 Identities=11% Similarity=0.097 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--C----------------HHHHHHHHHhCCeEEeCCC-
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--N----------------ATQVEKLIKEHSVYLTKDG- 396 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~----------------~~~v~~Ll~e~~Vy~~p~g- 396 (420)
.+.++++++++.|.+.|+++--..++..-....|++.-+-+ + ...+...+.++||++.+.|
T Consensus 325 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~ 404 (442)
T TIGR00709 325 NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR 404 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC
Confidence 34467777788888888764211113223345666663211 0 1223333458999997653
Q ss_pred -----cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 397 -----RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 -----Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
||..+ .+++++|+++.+++.+++
T Consensus 405 ~~~~l~~~Ppl~it~~ei~~~~~~l~~~l 433 (442)
T TIGR00709 405 EGEVFRLLCPITIDQEECEEGISRFKQAV 433 (442)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 54433 258999999999998876
No 446
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=69.36 E-value=21 Score=38.56 Aligned_cols=37 Identities=16% Similarity=0.155 Sum_probs=28.4
Q ss_pred HHHHHhCCeEEeCCC---cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 382 EKLIKEHSVYLTKDG---RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 382 ~~Ll~e~~Vy~~p~g---Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
+.+ .++||++.+.| ||+-. .+++++|+.+.+++.+++
T Consensus 449 ~~~-~~~Gvl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al 489 (504)
T PLN02760 449 AEC-KKRGMLVRVAGDNIMMSPPLIITPEEVDELISIYGKAL 489 (504)
T ss_pred HHH-HhCCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 444 57899998865 66622 278999999999998875
No 447
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=69.20 E-value=29 Score=36.64 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------C---HHHHHHHHHhCCeEEeCCC---cEEEc-cc
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N---ATQVEKLIKEHSVYLTKDG---RISMA-GV 403 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~---~~~v~~Ll~e~~Vy~~p~g---Ris~a-gl 403 (420)
+.++.+++-+.|.+.|+++.- .++-.-....|++.-+.+ + ..++...+.+.||++.++| ||+-. .+
T Consensus 347 l~~~~~~~g~~l~~~l~~l~~-~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~lr~~Ppl~~ 425 (445)
T PRK09221 347 LFERAAELAPYFEDAVHSLKG-LPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTGDTIALSPPLII 425 (445)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-CCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecCCEEEEECCccC
Confidence 345666666677777766521 111111234566653211 1 1234333458899998765 66622 26
Q ss_pred CCCCHHHHHHHHHHHh
Q psy16707 404 TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 404 ~~~ni~~la~AI~~vv 419 (420)
+++.|+.+.+++++++
T Consensus 426 t~~eid~~~~~l~~~l 441 (445)
T PRK09221 426 EKAQIDELVDALGDAL 441 (445)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8899999999999876
No 448
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=69.09 E-value=30 Score=34.72 Aligned_cols=84 Identities=15% Similarity=0.163 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCHH-HHHHHHHhcceEEcCC-------Cceec
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNAT-QVEKLIKEHSVYLTKD-------GRISM 109 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-----L~~~-qv~~L~~~~~IY~~~~-------GRinv 109 (420)
++...+|+...|+.|.+.|++.|..--..--.+..+..++.. .+.+ -.+.|. +.+|.+... =||+.
T Consensus 263 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gi~v~~g~~~~~~~iRis~ 341 (368)
T PRK13479 263 VPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLK-EQGFVIYPGKLTQVDTFRIGC 341 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHH-HCCEEEecCCCCCCCEEEEec
Confidence 455668999999999999988753210000001124444441 2334 455665 458888432 27864
Q ss_pred -ccCCcCCHHHHHHHHHhh
Q psy16707 110 -AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 110 -agl~~~ni~~va~ai~~v 127 (420)
.-.+..++++++++|.++
T Consensus 342 ~~~~t~edi~~~l~~L~~~ 360 (368)
T PRK13479 342 IGDVDAADIRRLVAAIAEA 360 (368)
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 557789999999999876
No 449
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=68.81 E-value=21 Score=36.34 Aligned_cols=79 Identities=14% Similarity=0.201 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-------HHHHHHHHhcceEEcCCC----ceecc-cCCcC
Q psy16707 48 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-------TQVEKLIKEHSVYLTKDG----RISMA-GVTSK 115 (420)
Q Consensus 48 ~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-------~qv~~L~~~~~IY~~~~G----Rinva-gl~~~ 115 (420)
++++.+++.|.+.|++.-....|..-.+..|+|...-+.+ +-++.|. +++|++.+.+ ||+.+ .+++.
T Consensus 302 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~lRi~~~~~~~~~ 380 (400)
T PTZ00125 302 ENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLK-ENGLLAKPTHDNIIRFAPPLVITKE 380 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcchHHHHHHHHHH-HCCeEEeecCCCEEEEECCccCCHH
Confidence 3444445555555544311112221134567776554431 2345565 6699998654 56653 47888
Q ss_pred CHHHHHHHHHhh
Q psy16707 116 NVGYLAKAIHAN 127 (420)
Q Consensus 116 ni~~va~ai~~v 127 (420)
+|+.+.+.|.++
T Consensus 381 ~i~~~l~~l~~~ 392 (400)
T PTZ00125 381 QLDQALEIIKKV 392 (400)
T ss_pred HHHHHHHHHHHH
Confidence 899888888764
No 450
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=68.59 E-value=28 Score=34.22 Aligned_cols=79 Identities=19% Similarity=0.106 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-CCHHHHHHHHH------hcceEEcCCC----ceecccC-
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-LNATQVEKLIK------EHSVYLTKDG----RISMAGV- 112 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-L~~~qv~~L~~------~~~IY~~~~G----Rinvagl- 112 (420)
...+++..+|+.|.+.|++.+. .....+.+++.+-- -..+....|.+ +++|++...+ ||++...
T Consensus 248 ~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~ 323 (338)
T cd06502 248 RRLRHDHEMARRLAEALEELGG----LESEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDT 323 (338)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC----CcccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCC
Confidence 3446777778888888887653 22234555554321 12333344443 4678876554 6666665
Q ss_pred CcCCHHHHHHHHHhh
Q psy16707 113 TSKNVGYLAKAIHAN 127 (420)
Q Consensus 113 ~~~ni~~va~ai~~v 127 (420)
+.+.++.+++++..|
T Consensus 324 ~~~~i~~~~~~l~~~ 338 (338)
T cd06502 324 TEEDVDELLSALKAV 338 (338)
T ss_pred CHHHHHHHHHHHhcC
Confidence 667799999988764
No 451
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=68.56 E-value=40 Score=34.16 Aligned_cols=106 Identities=18% Similarity=0.184 Sum_probs=62.6
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccccccc-ceeec--C--C
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLT---EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIG-MFCYT--G--L 85 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~---el~~m~~Ri~~~R~~l~~~L~~~-~~~~~w~~i~~Q~G-mFs~~--g--L 85 (420)
+.+||.+|..-...-|. |.. -++.+.+|.+.+.+.|++.|++. |--..-..-..+.+ .++|. + |
T Consensus 233 ~~Tpn~~~i~~L~aal~-------~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l 305 (355)
T cd00611 233 YNTPPTFAIYMMGLVLK-------WLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEEL 305 (355)
T ss_pred CCCChHHHHHHHHHHHH-------HHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhh
Confidence 66888887655554443 333 27899999999999999999987 42100000012343 37776 4 2
Q ss_pred CHHHHHHHH-HhcceEEcC----CCceecccC-CcCCHHHHHHHHHhh
Q psy16707 86 NATQVEKLI-KEHSVYLTK----DGRISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~~qv~~L~-~~~~IY~~~----~GRinvagl-~~~ni~~va~ai~~v 127 (420)
..+-...+. .-+++|... .=|+++.+. +..+||++.+++.++
T Consensus 306 ~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 306 EKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred hHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 333223332 233333331 137777554 458999999998874
No 452
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=68.14 E-value=21 Score=36.44 Aligned_cols=79 Identities=14% Similarity=0.120 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---C--CC-HHHHHHHHHhcceEEcCC--Cc--eecc-cCCc
Q psy16707 46 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---G--LN-ATQVEKLIKEHSVYLTKD--GR--ISMA-GVTS 114 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---g--L~-~~qv~~L~~~~~IY~~~~--GR--inva-gl~~ 114 (420)
+.++.+.+++.|.+.|++.+.+ .... .+..|++... + .+ .+-++.|.+ ++|++... ++ ++.+ ..++
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~~~-~~~~-~~g~g~~~~i~~~~~~~~~~~~~~~L~~-~GV~v~~~~~~~lR~~p~~~~t~ 385 (401)
T PRK00854 309 MIENAAEMGAYFLEGLRSIRSN-IVRE-VRGRGLMLAVELEPEAGGARQYCEALKE-RGLLAKDTHDHTIRLAPPLVITR 385 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhccC-ceEE-EeccceEEEEEEecCchhHHHHHHHHHH-CCeEEecCCCCEEEEeCCcccCH
Confidence 5677777888888888876421 1111 1234443322 2 12 334566765 59998754 34 4442 6889
Q ss_pred CCHHHHHHHHHhh
Q psy16707 115 KNVGYLAKAIHAN 127 (420)
Q Consensus 115 ~ni~~va~ai~~v 127 (420)
++|+.+.++|.++
T Consensus 386 e~i~~~i~~l~~~ 398 (401)
T PRK00854 386 EQVDWALEQIAKV 398 (401)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 453
>PRK06541 hypothetical protein; Provisional
Probab=68.11 E-value=20 Score=38.08 Aligned_cols=79 Identities=15% Similarity=0.199 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccc--CCCCceEEecCC----------CH--------HHH-HHHHHhCCeEEeCC
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHI--TDQIGMFCYTGL----------NA--------TQV-EKLIKEHSVYLTKD 395 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i--~~q~GmF~~~~l----------~~--------~~v-~~Ll~e~~Vy~~p~ 395 (420)
+.++++++.+.|.+.|+++.. |..+ ....|+|.-+-+ +. ..+ +.| .+.||++.+.
T Consensus 347 ~~~~~~~~g~~l~~~L~~l~~---~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~ 422 (460)
T PRK06541 347 LLDHVRDNEPAFRATLEKLLD---LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPAL-FEAGLYCRAD 422 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhhc---CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHH-HhCCeEEEec
Confidence 447788888888888887631 3222 335566653211 11 122 344 5789999762
Q ss_pred --C----cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 396 --G----RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g----Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
| ||+-. .+++++|+.+.+++++++
T Consensus 423 ~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l 453 (460)
T PRK06541 423 DRGDPVVQLAPPLISGQEEFDEIEQILRSVL 453 (460)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 2 56655 258889999999998876
No 454
>PRK06105 aminotransferase; Provisional
Probab=67.82 E-value=22 Score=37.79 Aligned_cols=80 Identities=14% Similarity=0.171 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----------C--H---HHHHHHHHhCCeEEeCCC---cEEE
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----------N--A---TQVEKLIKEHSVYLTKDG---RISM 400 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----------~--~---~~v~~Ll~e~~Vy~~p~g---Ris~ 400 (420)
++.+++-+.|.+.|+++ ...++-.-....|++.-+-+ + . ..+...+.++||++.+.| ||+-
T Consensus 349 ~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g~~i~l~P 427 (460)
T PRK06105 349 GNAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCP 427 (460)
T ss_pred HHHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecCCEEEEEC
Confidence 44555555555555554 22223223446677763211 1 1 233333468999998865 5553
Q ss_pred c-ccCCCCHHHHHHHHHHHh
Q psy16707 401 A-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 401 a-gl~~~ni~~la~AI~~vv 419 (420)
. .+++++|+++.+++.+++
T Consensus 428 pl~it~~eid~~~~~l~~~l 447 (460)
T PRK06105 428 PLIITAAQVDEMVDRFGRAL 447 (460)
T ss_pred CCccCHHHHHHHHHHHHHHH
Confidence 3 158999999999998876
No 455
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=66.83 E-value=23 Score=36.53 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccc----------eeecCCCH-------------HHH-HHHHHhcceEE
Q psy16707 46 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM----------FCYTGLNA-------------TQV-EKLIKEHSVYL 101 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~Gm----------Fs~~gL~~-------------~qv-~~L~~~~~IY~ 101 (420)
+.++++.+++.|.+.|++.+ +.++.+-+|. +-..-+.+ .++ +.| .+++|++
T Consensus 263 ~~~~l~~~~~~l~~~L~~~~----~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gi~~ 337 (392)
T PLN03227 263 LLNRLHDSIANLYSTLTNSS----HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHS-LSEGVAV 337 (392)
T ss_pred HHHHHHHHHHHHHHHHHhcC----CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHH-HHCCCEE
Confidence 45566677777777776522 3445544442 22222332 133 344 4568888
Q ss_pred cCCC---------------ceec-ccCCcCCHHHHHHHHHhhC
Q psy16707 102 TKDG---------------RISM-AGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 102 ~~~G---------------Rinv-agl~~~ni~~va~ai~~v~ 128 (420)
...| ||++ ++.+.+.||+++++|.++.
T Consensus 338 ~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~ 380 (392)
T PLN03227 338 VSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAV 380 (392)
T ss_pred EecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 5544 3333 3447788999999988873
No 456
>PLN02431 ferredoxin--nitrite reductase
Probab=66.05 E-value=20 Score=39.62 Aligned_cols=86 Identities=15% Similarity=0.128 Sum_probs=63.9
Q ss_pred CCCHHHHHHH---HHhcc----eEEcCCCceecccCCcCCHHHHHHHHHhhCCCcccch-hhhccccCCChHHHHHHHHH
Q psy16707 84 GLNATQVEKL---IKEHS----VYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQ-DARTSSVKVPSSNLLTEAFK 155 (420)
Q Consensus 84 gL~~~qv~~L---~~~~~----IY~~~~GRinvagl~~~ni~~va~ai~~v~~~p~~~~-~~~~~~~~~d~i~~l~~~~~ 155 (420)
-||++|...| -++|+ |-+|.-+.|.+=||...|++.+.+.+.+||..+.... +. +.++..+|.-
T Consensus 147 ~lt~~Qlr~la~ia~~yg~~G~i~iTtRqniQl~gI~~ed~p~i~~~L~~vGL~t~~a~gd~-vRNI~~~P~a------- 218 (587)
T PLN02431 147 VTTSAQTRYLASVIEKYGEDGCADVTTRQNWQIRGVVLPDVPAILKGLEEVGLTSLQSGMDN-VRNPVGNPLA------- 218 (587)
T ss_pred ccCHHHHHHHHHHHHHhCCCCeEEEecCcceEeCCCCHHHHHHHHHHHHHcCCCchhccCCC-CCCcccCCCC-------
Confidence 4999998765 46774 7899999999999999999999999999998885433 44 5555554432
Q ss_pred ccCCCCceeecccccccCCCCCCchHHHHHHHHHHH
Q psy16707 156 KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVL 191 (420)
Q Consensus 156 ~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~ 191 (420)
|. |+++..-+-+.+++..+.+.
T Consensus 219 ------------G~--~~~e~~Dt~pla~~l~~~~~ 240 (587)
T PLN02431 219 ------------GI--DPHEIVDTRPYTNLLSDYIT 240 (587)
T ss_pred ------------CC--CccccccHHHHHHHHHHHhh
Confidence 43 56666777777777666554
No 457
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=66.00 E-value=22 Score=37.74 Aligned_cols=35 Identities=9% Similarity=0.118 Sum_probs=26.5
Q ss_pred HHhCCeEEeCC-C---cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 385 IKEHSVYLTKD-G---RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 385 l~e~~Vy~~p~-g---Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
+.+.||++.+. + ||+-. .+++++|+++.+++++++
T Consensus 410 ~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~l~~~l 449 (459)
T PRK06082 410 CLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAI 449 (459)
T ss_pred HHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 35899999875 3 55522 379999999999998875
No 458
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=65.81 E-value=19 Score=38.13 Aligned_cols=35 Identities=17% Similarity=0.040 Sum_probs=26.7
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
+.+.+|+.|+.+++..+ +.| ||+|++++..|+...
T Consensus 88 v~fsSG~~Ai~~al~~l--l~~-Gd~VI~~~~~y~~t~ 122 (437)
T PRK05613 88 VAFASGQAAETAAILNL--AGA-GDHIVTSPRLYGGTE 122 (437)
T ss_pred EEeCCHHHHHHHHHHHh--cCC-CCEEEECCCccHHHH
Confidence 66888998887655433 456 999999999888764
No 459
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=65.44 E-value=28 Score=36.07 Aligned_cols=80 Identities=18% Similarity=0.293 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--------------H----HHHHHHHHhcceE
Q psy16707 39 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------------A----TQVEKLIKEHSVY 100 (420)
Q Consensus 39 W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--------------~----~qv~~L~~~~~IY 100 (420)
|.+.+.++.++ +|+.|.+.+++++...+ ....|+|...-+. . .-++.|. +++|+
T Consensus 318 ~~~~~~~~~~~---~~~~l~~~~~~~~~~~~----v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~ 389 (423)
T TIGR00713 318 VYTELDELAKR---LAEGLSEVLEDTGIPHT----VNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVF 389 (423)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHhcCCCeE----EEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeE
Confidence 55555554444 56677766665543221 2334444432111 1 2334565 47899
Q ss_pred EcCCC----ceecccCCcCCHHHHHHHHHhh
Q psy16707 101 LTKDG----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 101 ~~~~G----Rinvagl~~~ni~~va~ai~~v 127 (420)
+...| |++.+ ++..+|+.+.+++.++
T Consensus 390 v~~~~~~~~~l~~~-~t~~~i~~~~~~l~~~ 419 (423)
T TIGR00713 390 LPPSQFEACFLSAA-HTEEDIENTIEAAEEV 419 (423)
T ss_pred EecCCccceeeECC-CCHHHHHHHHHHHHHH
Confidence 87653 67665 7888999998888776
No 460
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=65.40 E-value=23 Score=37.17 Aligned_cols=38 Identities=26% Similarity=0.303 Sum_probs=27.5
Q ss_pred HHHHHHHhCCeEEeCCC----cEEEc-ccCCCCHHHHHHHHHHH
Q psy16707 380 QVEKLIKEHSVYLTKDG----RISMA-GVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 380 ~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni~~la~AI~~v 418 (420)
..+.| .+.||++.|.| ||+.. .+++++|+++.+++.+|
T Consensus 389 ~~~~l-~~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 389 VIRQL-YREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred HHHHH-HhCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 33555 58899998865 54333 26888999999999875
No 461
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=65.26 E-value=33 Score=37.07 Aligned_cols=108 Identities=18% Similarity=0.301 Sum_probs=58.2
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--ccccceeec----CCC
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCYT----GLN 86 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~Q~GmFs~~----gL~ 86 (420)
..||+|..| .|++..+.=.++.+. |-++.++++...=+.|.+.|++.|-+ -+. .+..++... +.+
T Consensus 312 ~i~gg~l~p--~iAA~avAl~e~~~~---ef~~y~~~l~~Na~~La~~L~~~G~~----vv~ggTdshIV~V~lg~~~~~ 382 (493)
T PRK13580 312 LVLGGPLPH--VMAAKAVALAEARTP---EFQKYAQQVVDNARALAEGFLKRGAR----LVTGGTDNHLVLIDVTSFGLT 382 (493)
T ss_pred cccCCCccH--HHHHHHHHHHHHhCc---cHHHHHHHHHHHHHHHHHHHHhcCCC----ccCCCCCCCEEEEEeCCHHHH
Confidence 567777776 444333321111111 11233555555555566666665532 110 122333322 234
Q ss_pred HHHHHHHHHhcceEEcC-------CC-------ceecc-----cCCcCCHHHHHHHHHhhCC
Q psy16707 87 ATQVEKLIKEHSVYLTK-------DG-------RISMA-----GVTSKNVGYLAKAIHANGS 129 (420)
Q Consensus 87 ~~qv~~L~~~~~IY~~~-------~G-------Rinva-----gl~~~ni~~va~ai~~v~~ 129 (420)
..+++..-++.+||+.. .| ||++. |.+.+.++.++++|.++..
T Consensus 383 g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 383 GRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred HHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 45666344677999964 34 66644 6667999999999988753
No 462
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=64.94 E-value=27 Score=36.99 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----C-----HHHHHHHHHhCCeEEeCCC---cEE--EcccC
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----N-----ATQVEKLIKEHSVYLTKDG---RIS--MAGVT 404 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~-----~~~v~~Ll~e~~Vy~~p~g---Ris--~agl~ 404 (420)
++.+++-+.|.+.|+++. ..+.-.-....|++.-+-+ + ...+...+.++||++.+.| ||+ ++ ++
T Consensus 352 ~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~l~~~Ppl~-it 429 (453)
T PRK06943 352 ARNARKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIGTTVYLMPPYV-LD 429 (453)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecCCEEEEeCCCc-CC
Confidence 444444555555555542 1111112345676663221 1 1223233358999998865 666 55 89
Q ss_pred CCCHHHHHHHHHHHh
Q psy16707 405 SKNVGYLAKAIHAVT 419 (420)
Q Consensus 405 ~~ni~~la~AI~~vv 419 (420)
+++|+++.+++++++
T Consensus 430 ~~eid~~~~~l~~al 444 (453)
T PRK06943 430 DDEIAWLAERTRATL 444 (453)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999876
No 463
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=64.83 E-value=23 Score=37.36 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccc--CCCCceEEecCC-------C--HHHH-HHHHHhCCeEEeCCC---cEEEcc
Q psy16707 338 ADRIISMRQSLKDNLQKEGSNKPWNHI--TDQIGMFCYTGL-------N--ATQV-EKLIKEHSVYLTKDG---RISMAG 402 (420)
Q Consensus 338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i--~~q~GmF~~~~l-------~--~~~v-~~Ll~e~~Vy~~p~g---Ris~ag 402 (420)
.++.+++-+.|.+.|++++- +.++ ....|++.-+.+ + ...+ +.| .+.||++.+.| ||+..-
T Consensus 345 ~~~~~~~g~~l~~~l~~l~~---~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~~~~lr~~Ppl 420 (442)
T PRK13360 345 LTRAARLAPYWEDALHSLRD---APHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKC-FEKGLMIRYTGDILALSPPL 420 (442)
T ss_pred HHHHHHHHHHHHHHHHHhhc---CCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHH-HHCCcEEEecCCEEEEeCCC
Confidence 34555555555566655431 1122 234566642211 1 1233 444 57899998764 776322
Q ss_pred -cCCCCHHHHHHHHHHHh
Q psy16707 403 -VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 -l~~~ni~~la~AI~~vv 419 (420)
++.++|+.+.+++.+++
T Consensus 421 ~~t~~eid~~~~~l~~~l 438 (442)
T PRK13360 421 IIEEAQIDELFDILAQAL 438 (442)
T ss_pred ccCHHHHHHHHHHHHHHH
Confidence 68888999999998875
No 464
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=64.83 E-value=19 Score=36.22 Aligned_cols=98 Identities=23% Similarity=0.387 Sum_probs=66.3
Q ss_pred cchHHHHHHHHhCChhHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCCC----------Ccccc---cccccee
Q psy16707 19 PIHGARIVQEILGDPKLKA---QWLTEVKGMADRIISMRQSL-KDNLQKEGSNKP----------WNHIT---DQIGMFC 81 (420)
Q Consensus 19 P~hGa~iv~~IL~~~~L~~---~W~~el~~m~~Ri~~~R~~l-~~~L~~~~~~~~----------w~~i~---~Q~GmFs 81 (420)
.+.||-||+.+-+=|..++ .|.+|++.-|-=...|-+.= +..|-+ .|.+ |.-|. +.+|.|-
T Consensus 258 T~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~--rPk~HdLm~Fetp~f~eIakk~~r~gyFl 335 (382)
T COG1103 258 TVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGE--RPKNHDLMKFETPVFHEIAKKHKRKGYFL 335 (382)
T ss_pred cccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCC--CCcccceeeecCchHHHHHHhCcCCceee
Confidence 3789999999999998774 69999998664444443221 122211 1222 22333 3678888
Q ss_pred ecCCCHHHHHHHHHhcceEEcCCC-----ceecccCCcCCHHHHHHHHHhh
Q psy16707 82 YTGLNATQVEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 82 ~~gL~~~qv~~L~~~~~IY~~~~G-----Rinvagl~~~ni~~va~ai~~v 127 (420)
| +.| ++.+|.-...| .+|+-||+...|+||++|++++
T Consensus 336 Y--------~EL-K~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI 377 (382)
T COG1103 336 Y--------EEL-KKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEI 377 (382)
T ss_pred H--------HHH-HhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 7 345 35567766666 5799999999999999999886
No 465
>PRK07179 hypothetical protein; Provisional
Probab=63.89 E-value=26 Score=35.96 Aligned_cols=82 Identities=17% Similarity=0.287 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-CC--CHHHHH-HHHHhcceEEc----C-------CC
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-GL--NATQVE-KLIKEHSVYLT----K-------DG 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-gL--~~~qv~-~L~~~~~IY~~----~-------~G 105 (420)
++.+..++|++.+|+.|.+.|++.+ |. +.....|+++. +- +.+++. .| .+++|+.. + -=
T Consensus 299 ~~~~~~~~~l~~~~~~l~~~L~~~g----~~-v~~~~~i~~l~~~~~~~~~~~~~~L-~~~GI~~~~~~~p~~~~~~~~l 372 (407)
T PRK07179 299 ESADDRRARLHANARFLREGLSELG----YN-IRSESQIIALETGSERNTEVLRDAL-EERNVFGAVFCAPATPKNRNLI 372 (407)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHcC----CC-CCCCCCEEEEEeCCHHHHHHHHHHH-HHCCceEeeecCCCCCCCCceE
Confidence 3445678899999999999998764 32 22233444443 21 224443 45 55788731 1 13
Q ss_pred ceeccc-CCcCCHHHHHHHHHhhC
Q psy16707 106 RISMAG-VTSKNVGYLAKAIHANG 128 (420)
Q Consensus 106 Rinvag-l~~~ni~~va~ai~~v~ 128 (420)
||++.. .+.++|++++++|.++.
T Consensus 373 Ris~~~~~t~edi~~~~~~l~~~~ 396 (407)
T PRK07179 373 RLSLNADLTASDLDRVLEVCREAR 396 (407)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHH
Confidence 567654 57799999999998873
No 466
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=63.83 E-value=49 Score=34.63 Aligned_cols=37 Identities=11% Similarity=0.142 Sum_probs=28.3
Q ss_pred HHHHHhCCeEEeCCC----cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 382 EKLIKEHSVYLTKDG----RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 382 ~~Ll~e~~Vy~~p~g----Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
+.| .++||++.+.+ .++++ +++++|+++.+++.++++
T Consensus 386 ~~l-~~~Gv~~~~~~~~~~~~~l~-~t~e~id~~~~~l~~~l~ 426 (428)
T PRK12389 386 KLM-LNQGINLAPSKYEAWFLTTA-HTEEDIEETLEAVDRAFA 426 (428)
T ss_pred HHH-HHCCcEeecCCCCCeeecCC-CCHHHHHHHHHHHHHHHH
Confidence 444 57899998854 35554 789999999999998863
No 467
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=63.55 E-value=41 Score=35.01 Aligned_cols=38 Identities=21% Similarity=0.172 Sum_probs=29.4
Q ss_pred HHHHHHhCCeEEeCCC---cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 381 VEKLIKEHSVYLTKDG---RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 381 v~~Ll~e~~Vy~~p~g---Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
.+.| .++||++.+.+ ||+.. .+++++|+.+.+++.+++
T Consensus 379 ~~~l-~~~Gv~v~~~~~~lR~~p~l~~t~edId~~v~~l~~al 420 (423)
T PRK05964 379 RAFA-LERGVLLRPLGNTIYLMPPYIITAEELDRITDAIVEVA 420 (423)
T ss_pred HHHH-HHCCeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 3445 57899998754 77644 368899999999999876
No 468
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=63.24 E-value=21 Score=36.15 Aligned_cols=79 Identities=18% Similarity=0.229 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc-cc--ceeec---CCCHHH-HHHHHHhcceEEcCC-----C--ce
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ-IG--MFCYT---GLNATQ-VEKLIKEHSVYLTKD-----G--RI 107 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q-~G--mFs~~---gL~~~q-v~~L~~~~~IY~~~~-----G--Ri 107 (420)
.++++++|+..++..|.+.|++.+.. ...... .+ +|.+. |.+.++ +++|. +++|+.... + |+
T Consensus 305 g~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~-~~gi~~~~~~~~~~~~lRi 380 (398)
T cd00613 305 GLKEIAERAHLNANYLAKRLKEVGGV---LPFNGPFFHEFVLRLPPLYGIRAEDLAKALI-DGGFHAPTMYLPVDGTLMI 380 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc---ccCCCCeeEEEEEEcCCcchHHHHHHHHhhh-hcCccccccccCCCCeEEE
Confidence 46678899999999999999876421 111111 11 33333 223334 44554 567776542 2 56
Q ss_pred ecccCC-cCCHHHHHHHH
Q psy16707 108 SMAGVT-SKNVGYLAKAI 124 (420)
Q Consensus 108 nvagl~-~~ni~~va~ai 124 (420)
+..-.| .++||.+++++
T Consensus 381 s~~~~~t~edid~~~~~L 398 (398)
T cd00613 381 EPTETETKEELDALLEAL 398 (398)
T ss_pred EcCCCCCHHHHHHHHHhC
Confidence 655544 36788887763
No 469
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=62.87 E-value=23 Score=35.95 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-----ccccceeec--CCCHH-HHHHHHHhcceEEcC-----------
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-----DQIGMFCYT--GLNAT-QVEKLIKEHSVYLTK----------- 103 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-----~Q~GmFs~~--gL~~~-qv~~L~~~~~IY~~~----------- 103 (420)
++.+++|+..+++.|.+.|++.+. +.-+. .+.+++++. |.+.+ -+++| ++++|++..
T Consensus 292 ~~~~~~~~~~l~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~ 367 (397)
T TIGR01976 292 FQAIDAYENRLAEYLLVGLSDLPG---VTLYGVARLAARVPTVSFTVHGLPPQRVVRRL-ADQGIDAWAGHFYAVRLLRR 367 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCccCCCceEEEEeCCcCHHHHHHHH-HHCCeEEEeCccchHHHHHH
Confidence 678899999999999999987541 22211 245666543 55544 45567 566988752
Q ss_pred ------CC--ceecccCCc-CCHHHHHHHH
Q psy16707 104 ------DG--RISMAGVTS-KNVGYLAKAI 124 (420)
Q Consensus 104 ------~G--Rinvagl~~-~ni~~va~ai 124 (420)
.+ ||++.+.|+ .+|++++++|
T Consensus 368 ~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 368 LGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred hCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 12 566655444 5688888764
No 470
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=62.45 E-value=44 Score=35.03 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=29.2
Q ss_pred HHHHHHHhCCeEEeCCC---cEEEc-ccCCCCHHHHHHHHHHHhC
Q psy16707 380 QVEKLIKEHSVYLTKDG---RISMA-GVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 380 ~v~~Ll~e~~Vy~~p~g---Ris~a-gl~~~ni~~la~AI~~vv~ 420 (420)
..++| .+.||++.+.+ |++.. .+++++|+++.++++++++
T Consensus 382 ~~~~l-~~~Gv~~~~~~~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 382 LQKKF-VEQGVWIRPFGKLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred HHHHH-HHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 34555 57899998865 55443 2578889999999998863
No 471
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=62.24 E-value=70 Score=32.83 Aligned_cols=50 Identities=10% Similarity=0.147 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCccccccccceeecCCCHHHH
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEG---SNKPWNHITDQIGMFCYTGLNATQV 90 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~---~~~~w~~i~~Q~GmFs~~gL~~~qv 90 (420)
++++.+.+|+..+|..|.+.|++.. .-+++.........|+|.+...+.+
T Consensus 259 ~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~ 311 (402)
T TIGR02006 259 EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESL 311 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHH
Confidence 3577788999999999999997642 1122222111223588888776654
No 472
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=60.78 E-value=43 Score=34.83 Aligned_cols=81 Identities=14% Similarity=0.129 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee--c--CCCHH-HHHHHHHhcceEE----c-------CC
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--T--GLNAT-QVEKLIKEHSVYL----T-------KD 104 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~--~--gL~~~-qv~~L~~~~~IY~----~-------~~ 104 (420)
+.++++++|+..+|..|.+.|++.+. +..+ +.++|.+ . +.+.+ =+++|.++ +|.. . ..
T Consensus 348 ~g~~~~~~~~~~~~~~l~~~L~~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~ 421 (447)
T PRK00451 348 EGLRELAEQNHQKAHYLAERLAEIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALLEK-GILGGYDLGRYYPELGNH 421 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHHhc-CCCCCcccccccCCcCCE
Confidence 34778899999999999999987531 2222 3344433 2 33444 45567554 3321 1 12
Q ss_pred Cceeccc-CCcCCHHHHHHHHHhh
Q psy16707 105 GRISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 GRinvag-l~~~ni~~va~ai~~v 127 (420)
=|+++.. -+.+.|+++++++.++
T Consensus 422 ~rvs~~~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 422 LLVCVTEKRTKEDIDALVAALGEV 445 (447)
T ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Confidence 2556554 4557999999998764
No 473
>PRK07678 aminotransferase; Validated
Probab=60.52 E-value=38 Score=35.80 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=25.9
Q ss_pred HHhCCeEEeCC--------C--cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 385 IKEHSVYLTKD--------G--RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 385 l~e~~Vy~~p~--------g--Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
+.+.||++.+. . ||+.. .+++++|+.+.+++.+++
T Consensus 402 l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l 447 (451)
T PRK07678 402 CKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTAL 447 (451)
T ss_pred HHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 35789999653 2 44433 368999999999999876
No 474
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=60.32 E-value=74 Score=32.06 Aligned_cols=98 Identities=14% Similarity=0.132 Sum_probs=61.4
Q ss_pred cchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHH-HHHHHHh
Q psy16707 19 PIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQ-VEKLIKE 96 (420)
Q Consensus 19 P~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~q-v~~L~~~ 96 (420)
+.....+...+|+++ .| ++.++++++..|+.|++.|++. ++ +.... -.|.|.+.-+. .++ .++|. +
T Consensus 246 ~~~~q~~~~~~l~~~----~~---~~~~~~~~~~~r~~l~~~L~~~--~~-~~~~~-~~g~f~~~~~~~~~~~~~~l~-~ 313 (354)
T PRK06358 246 NTFADLAGQTLLDDK----EY---IKKTIQWIKEEKDFLYNGLSEF--KG-IKVYK-PSVNFIFFKLEKPIDLRKELL-K 313 (354)
T ss_pred hHHHHHHHHHHhccH----HH---HHHHHHHHHHHHHHHHHHHhcC--CC-cEEcC-CcceEEEEEcCchHHHHHHHH-H
Confidence 444556667777652 33 5667777888899999999765 23 44333 35668777764 233 34554 5
Q ss_pred cceEEcCCCc--------eecccCCcCCHHHHHHHHHhhC
Q psy16707 97 HSVYLTKDGR--------ISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 97 ~~IY~~~~GR--------invagl~~~ni~~va~ai~~v~ 128 (420)
++|.+.+... |-|+=-++...+++.+++..+-
T Consensus 314 ~gI~v~~~~~f~~~~~~~iRls~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 314 KGILIRSCSNYRGLDENYYRVAVKSREDNKKLLKALEVIL 353 (354)
T ss_pred CCeEEEECCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 7998865322 3344334477888888887763
No 475
>PRK06917 hypothetical protein; Provisional
Probab=59.99 E-value=28 Score=36.79 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=26.3
Q ss_pred HHhCCeEEeCC--------C---cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 385 IKEHSVYLTKD--------G---RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 385 l~e~~Vy~~p~--------g---Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
+.+.||++.|. + |++-+ .+++++|+.+.+++.+++
T Consensus 389 ~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l 435 (447)
T PRK06917 389 AAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSV 435 (447)
T ss_pred HHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 35799999764 2 45422 278899999999999886
No 476
>PLN02452 phosphoserine transaminase
Probab=59.67 E-value=60 Score=33.50 Aligned_cols=107 Identities=20% Similarity=0.220 Sum_probs=63.8
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccccccc-ceeec--C
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTE---VKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIG-MFCYT--G 84 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~e---l~~m~~Ri~~~R~~l~~~L~~~-~~~~~w~~i~~Q~G-mFs~~--g 84 (420)
.++|.+||.++-......|. |..+ ++.|.+|-+.+.+.|++.|++. |--+....-..+.. -.+|. +
T Consensus 237 ~s~~~TP~v~~i~~l~~aL~-------~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~ 309 (365)
T PLN02452 237 DSLYNTPPCFGIYMCGLVFE-------DLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGG 309 (365)
T ss_pred CCccCChhHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCC
Confidence 36778999999998888876 6654 8899999999999999999874 22111100011233 34443 2
Q ss_pred --CCHHHHHHHHHhcceEEcCC----Ccee---cccCCcCCHHHHHHHHHh
Q psy16707 85 --LNATQVEKLIKEHSVYLTKD----GRIS---MAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 85 --L~~~qv~~L~~~~~IY~~~~----GRin---vagl~~~ni~~va~ai~~ 126 (420)
+..+=++.+ ++.+++..+. |.+- +-.++...|+.+++.+.+
T Consensus 310 ~~~~~~f~~~~-~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~ 359 (365)
T PLN02452 310 SELEAEFVKEA-AKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD 359 (365)
T ss_pred chhHHHHHHHH-HHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHH
Confidence 333333444 4556665322 2232 334445666666666654
No 477
>PRK07036 hypothetical protein; Provisional
Probab=59.62 E-value=27 Score=37.19 Aligned_cols=36 Identities=11% Similarity=0.101 Sum_probs=26.9
Q ss_pred HHHhCCeEEeCCC---cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 384 LIKEHSVYLTKDG---RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 384 Ll~e~~Vy~~p~g---Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
.+.+.||++.+.| ||+-. .+++++|+++.+++.+++
T Consensus 411 ~~~~~Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al 450 (466)
T PRK07036 411 HCQERGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAI 450 (466)
T ss_pred HHHHCCcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 3468999998865 44422 268999999999998875
No 478
>PRK09566 nirA ferredoxin-nitrite reductase; Reviewed
Probab=59.15 E-value=23 Score=38.18 Aligned_cols=58 Identities=14% Similarity=0.253 Sum_probs=47.8
Q ss_pred ccccceeec------CCCHHHHH---HHHHhcc----eEEcCCCceecccCCcCCHHHHHHHHHhhCCCcc
Q psy16707 75 DQIGMFCYT------GLNATQVE---KLIKEHS----VYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPI 132 (420)
Q Consensus 75 ~Q~GmFs~~------gL~~~qv~---~L~~~~~----IY~~~~GRinvagl~~~ni~~va~ai~~v~~~p~ 132 (420)
+|.|.|..- -||++|.. .+-++|+ |.+|....|.+-||...|++.+.+.+.++|..+.
T Consensus 61 ~~~g~fmvRvrip~G~lt~~Qlr~la~ia~~yg~~g~i~lTtRQniql~~i~~~dl~~i~~~L~~~GL~~~ 131 (513)
T PRK09566 61 VTPGKFMLRLRVPNGILTSEQLRVLASIVQRYGDDGSADITTRQNLQLRGILLEDLPEILNRLKAVGLTSV 131 (513)
T ss_pred CCCCeEEEEeccCCccCCHHHHHHHHHHHHHhCCCCeEEEEcccceeecCCcHHHHHHHHHHHHHcCCCch
Confidence 456666543 49999998 5567775 7889999999999999999999999999987664
No 479
>PLN02409 serine--glyoxylate aminotransaminase
Probab=58.63 E-value=1.1e+02 Score=31.49 Aligned_cols=82 Identities=11% Similarity=0.109 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-----cccceee---cCCCHHHH-HHHHHhcceEEcC------CC-
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-----QIGMFCY---TGLNATQV-EKLIKEHSVYLTK------DG- 105 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-----Q~GmFs~---~gL~~~qv-~~L~~~~~IY~~~------~G- 105 (420)
-++.+++|...+++.|.+.|++.|. ..+.. ..++.++ -|.+.+++ ..|.++|+|++.. .+
T Consensus 270 G~e~i~~~~~~l~~~l~~~L~~~g~----~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~ 345 (401)
T PLN02409 270 GLENVIARHARLGEATRLAVEAWGL----KLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKV 345 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCC----eeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCE
Confidence 3788999999999999999987642 22221 2244444 26777666 5888999998862 22
Q ss_pred -ceecccC-CcCCHHHHHHHHHhh
Q psy16707 106 -RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 -Rinvagl-~~~ni~~va~ai~~v 127 (420)
||+..|- +..+|..+..|+.++
T Consensus 346 ~Rig~~g~~~~~~~~~~~~~~~~~ 369 (401)
T PLN02409 346 FRIGHLGNVNELQLLGALAGVEMV 369 (401)
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHH
Confidence 4455553 335555555555554
No 480
>PRK06062 hypothetical protein; Provisional
Probab=58.36 E-value=38 Score=35.85 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=27.9
Q ss_pred HHHHHhCCeEEeCCC---cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 382 EKLIKEHSVYLTKDG---RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 382 ~~Ll~e~~Vy~~p~g---Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
+.| .+.||++.+.+ ||+.. .+++++|+++.+++.+++
T Consensus 403 ~~l-~~~Gvl~~~~~~~lrl~ppl~~t~~eid~~~~~l~~~l 443 (451)
T PRK06062 403 AAC-KERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAAL 443 (451)
T ss_pred HHH-HHCCcEEeecCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 444 58899997643 56542 279999999999998876
No 481
>PRK07505 hypothetical protein; Provisional
Probab=58.27 E-value=25 Score=36.09 Aligned_cols=40 Identities=15% Similarity=0.283 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCeEEeCC-----------CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 379 TQVEKLIKEHSVYLTKD-----------GRISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 379 ~~v~~Ll~e~~Vy~~p~-----------gRis~ag-l~~~ni~~la~AI~~vv 419 (420)
+..++|+ +.||++.+. -||++.. ++.+.++++.++|++++
T Consensus 346 ~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 346 KAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred HHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHH
Confidence 3456665 779999642 1888764 48889999999999875
No 482
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=58.23 E-value=41 Score=34.51 Aligned_cols=78 Identities=14% Similarity=0.100 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccccccceee--cCC------CHHHHHHHHHhcceEEcCCC----ceec-ccCC
Q psy16707 47 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGL------NATQVEKLIKEHSVYLTKDG----RISM-AGVT 113 (420)
Q Consensus 47 ~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~--~gL------~~~qv~~L~~~~~IY~~~~G----Rinv-agl~ 113 (420)
.+|...+...|.+.|++++.+ -...+ +..|.|.. .+- ..+-++.|. +++|++.+.+ ||+. ..++
T Consensus 309 ~~~~~~~~~~~~~~L~~l~~~-~~~~~-~g~g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~~~~~lRi~p~l~~t 385 (401)
T TIGR01885 309 AENAEKLGEIFRDQLKKLPKP-IITEV-RGRGLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPTHGNIIRLAPPLVIT 385 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCC-ceeEE-eecCeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEecCCCEEEEeCCccCC
Confidence 356667778888888877531 11111 23444433 222 133455664 6699987643 3443 2688
Q ss_pred cCCHHHHHHHHHhh
Q psy16707 114 SKNVGYLAKAIHAN 127 (420)
Q Consensus 114 ~~ni~~va~ai~~v 127 (420)
..+|+.+.++|.++
T Consensus 386 ~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 386 EEQLDEGLEIIKKV 399 (401)
T ss_pred HHHHHHHHHHHHHH
Confidence 89999999998764
No 483
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=57.87 E-value=55 Score=33.22 Aligned_cols=82 Identities=15% Similarity=0.230 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc--cccccceeec---CCC----------HHHHHHHHHhcceE-EcC
Q psy16707 40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI--TDQIGMFCYT---GLN----------ATQVEKLIKEHSVY-LTK 103 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i--~~Q~GmFs~~---gL~----------~~qv~~L~~~~~IY-~~~ 103 (420)
.+.++.+++.+.. ++.|.+.|++.|- ..+ ..+...|.+. +.. ..-.++|+ +.+|+ +..
T Consensus 264 ~~~l~~~~~~~~~-~~~l~~~L~~~g~----~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~-e~GI~~ir~ 337 (370)
T TIGR02539 264 VERVKRWDEEVKK-TRWFVAELEDIGF----IQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELK-KRGIHGIRS 337 (370)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhCCc----EEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHH-hCCCccccC
Confidence 4455555555444 4478888887652 211 1122323322 221 12455665 55887 433
Q ss_pred --CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 104 --DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 104 --~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.+ ||++.+-+..++++++++|.++
T Consensus 338 ~~~~~iRis~~~~t~e~i~~l~~~L~~~ 365 (370)
T TIGR02539 338 GQTKYFKLSVYGLTKEQVEYVVDSFEEI 365 (370)
T ss_pred CcceEEEEEecCCCHHHHHHHHHHHHHH
Confidence 22 6676678999999999999876
No 484
>PRK07481 hypothetical protein; Provisional
Probab=57.87 E-value=56 Score=34.56 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=27.5
Q ss_pred HHhCCeEEeCCC---cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 385 IKEHSVYLTKDG---RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 385 l~e~~Vy~~p~g---Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
+.+.||++.+.| ||+-+ .+++++|+.+.+++++++
T Consensus 405 ~~~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l 443 (449)
T PRK07481 405 ARENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGL 443 (449)
T ss_pred HHhCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 357999998876 56622 269999999999999876
No 485
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=57.65 E-value=1.3e+02 Score=30.22 Aligned_cols=95 Identities=12% Similarity=0.227 Sum_probs=56.0
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHH
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLI 94 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~qv~~L~ 94 (420)
++......+..+|++. +|. ++..+++...|+.+.+.|++.+ |..... .|-|-+.-+ ..+++...-
T Consensus 233 ~~~~~q~a~~~~l~~~----~~~---~~~~~~~~~~r~~l~~~L~~~g----~~~~~~-~g~f~~~~l~~~~~~~~~~~l 300 (335)
T PRK14808 233 VSYVSQMFAKVALDHR----EIF---EERTKFIVEERERMKSALREMG----YRITDS-RGNFVFIFMEKEEKERLLEHL 300 (335)
T ss_pred CCHHHHHHHHHHHhCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CEECCC-CCeEEEEeCCCccHHHHHHHH
Confidence 3444455566667653 243 3334455666888888888753 443333 455555433 445565555
Q ss_pred HhcceEEc---CCCceecccCCcCCHHHHHHHHHh
Q psy16707 95 KEHSVYLT---KDGRISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 95 ~~~~IY~~---~~GRinvagl~~~ni~~va~ai~~ 126 (420)
.+++|++. ..=||+++.- ...+++.++|..
T Consensus 301 ~~~Gi~V~~~~~~~Risi~~~--~~~~~~~~~l~~ 333 (335)
T PRK14808 301 RAKNIAVRSFREGVRITIGKR--EENDMILKELEV 333 (335)
T ss_pred HHCCeEEEECCCCeEEecCCH--HHHHHHHHHHHh
Confidence 67898775 2346666553 667788888764
No 486
>KOG2467|consensus
Probab=57.49 E-value=2.6e+02 Score=29.58 Aligned_cols=86 Identities=22% Similarity=0.373 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEe----cCCCHHHHHHHHHhCCeEEeC----------
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCY----TGLNATQVEKLIKEHSVYLTK---------- 394 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p---------- 394 (420)
--|.+.+.++..+.-..|.++|.+.| +.-++. ..=|-.| .|++-..+|+.++..||.+-+
T Consensus 316 tpefk~Yq~qV~~Nakala~~l~~~G----y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal 391 (477)
T KOG2467|consen 316 TPEFKEYQKQVLKNAKALASALISRG----YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSAL 391 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcC----ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCcccc
Confidence 34555566677777778888888887 332322 2224444 478889999999999998743
Q ss_pred --CC-cEEEc-----ccCCCCHHHHHHHHHHHhC
Q psy16707 395 --DG-RISMA-----GVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 395 --~g-Ris~a-----gl~~~ni~~la~AI~~vv~ 420 (420)
+| ||.-- |+-+++.+.+++-|+++|+
T Consensus 392 ~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 392 SPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 34 66543 4456778899999988863
No 487
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=56.92 E-value=39 Score=35.69 Aligned_cols=38 Identities=18% Similarity=0.159 Sum_probs=27.3
Q ss_pred HHHHHHhCCeEEeCC-C---cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 381 VEKLIKEHSVYLTKD-G---RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 381 v~~Ll~e~~Vy~~p~-g---Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
+..+ .++||++.+. + |+..+- +++++|+++.+++++++
T Consensus 385 ~~~~-~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 427 (445)
T PRK08593 385 CNYC-FEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAF 427 (445)
T ss_pred HHHH-HHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 3444 5789999763 2 555442 58889999999998875
No 488
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=56.89 E-value=44 Score=33.64 Aligned_cols=78 Identities=17% Similarity=0.222 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-C--CCHHH-HHHHHHhcceEEcC---------CCceecc-
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-G--LNATQ-VEKLIKEHSVYLTK---------DGRISMA- 110 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-g--L~~~q-v~~L~~~~~IY~~~---------~GRinva- 110 (420)
.+.+|+..+|+.|.+.|++.+ |..+..+..++.+. + .+.++ ++.|.++ +|++.. .+||.++
T Consensus 285 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~ 359 (385)
T TIGR01825 285 ELMERLWDNTRFFKAGLGKLG----YDTGGSETPITPVVIGDEKAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIP 359 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEECCHHHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEE
Confidence 356677788999999998764 33333333444333 1 12333 4667666 998742 1455443
Q ss_pred --cCCcCCHHHHHHHHHhh
Q psy16707 111 --GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 111 --gl~~~ni~~va~ai~~v 127 (420)
..+..+++.++++|.++
T Consensus 360 ~~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 360 TAEHTKDDLDQALDAYEKV 378 (385)
T ss_pred cCCCCHHHHHHHHHHHHHH
Confidence 57889999999998876
No 489
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=56.19 E-value=41 Score=35.59 Aligned_cols=35 Identities=14% Similarity=0.028 Sum_probs=27.1
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
+.+.+|++|+..++..+ +.| ||.|++++..|+.-.
T Consensus 88 v~~sSG~aAi~~al~al--l~~-Gd~Vv~~~~~y~~t~ 122 (436)
T PRK07812 88 LLLASGQAAETFAILNL--AGA-GDHIVSSPRLYGGTY 122 (436)
T ss_pred EEEccHHHHHHHHHHHH--hCC-CCEEEEeCCcchHHH
Confidence 56889999988877544 457 999999988777644
No 490
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=55.91 E-value=99 Score=31.45 Aligned_cols=103 Identities=16% Similarity=0.196 Sum_probs=55.6
Q ss_pred HHHHHHhhc-cCC-CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 5 NAKKILIRA-FYS-SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 5 ~~l~~i~R~-~yS-~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
..|....|+ .|| +||.. ..+...|.+.. .+.++++++..|..+.+.|.. +.....+.| |-|
T Consensus 222 ~~l~~~~~~~~~s~~~~~~--~aa~~aL~~~~--------~~~~~~~l~~r~~~~~~~l~~------~~~~~~~~~-f~~ 284 (346)
T TIGR03576 222 DKIKSVGEQFGLEAQAPLL--AAVVRALEEFE--------LSRIRDAFKRKEEVYLRLFDK------LNVERTPTG-FVI 284 (346)
T ss_pred HHHHHhhcCcccCccHHHH--HHHHHHHhhcc--------HHHHHHHHHHHHHHHHHHHHh------CCCCcCCCe-EEE
Confidence 455666665 343 44433 33333454321 123344444444444444442 222223555 656
Q ss_pred cCCC----HHHHHHHHHhcceEEcCC-------C--ceecccCCcC----CHHHHHHHHHh
Q psy16707 83 TGLN----ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSK----NVGYLAKAIHA 126 (420)
Q Consensus 83 ~gL~----~~qv~~L~~~~~IY~~~~-------G--Rinvagl~~~----ni~~va~ai~~ 126 (420)
.-++ .+.+..|-++++|.+.+- | ||+++. +. ..+++.++|.+
T Consensus 285 ~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~--~~~~~~~~~~~~~al~~ 343 (346)
T TIGR03576 285 KGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAA--KDAERIGDDYLVEAVKD 343 (346)
T ss_pred EeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEec--ChHHhcCHHHHHHHHHh
Confidence 5443 367888889999988761 2 666663 44 58899998865
No 491
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=55.83 E-value=45 Score=35.66 Aligned_cols=89 Identities=19% Similarity=0.326 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee--cCCCHHHHHHHHHhcceEEcCCC-------------ce
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGLNATQVEKLIKEHSVYLTKDG-------------RI 107 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~--~gL~~~qv~~L~~~~~IY~~~~G-------------Ri 107 (420)
.+..++++..+-+.|.+.|.+.|-.--=..-.++...+.+ .|++..+++..-++.+|.+-++. |+
T Consensus 312 ~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRi 391 (475)
T PLN03226 312 FKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRI 391 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCccc
Confidence 4555677777777777777764421000000134445554 37899999887788999886642 32
Q ss_pred -----ecccCCcCCHHHHHHHHHhhCCCc
Q psy16707 108 -----SMAGVTSKNVGYLAKAIHANGSLP 131 (420)
Q Consensus 108 -----nvagl~~~ni~~va~ai~~v~~~p 131 (420)
-=.|+++++++.+|+.|+++-.++
T Consensus 392 Gt~~lt~~g~~~~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 392 GTPAMTSRGLVEKDFEKVAEFLHRAVTIA 420 (475)
T ss_pred CcHHHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 236788899999999998876554
No 492
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=54.91 E-value=39 Score=35.65 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=24.5
Q ss_pred HhcceEEcCCCc----eecc-cCCcCCHHHHHHHHHhh
Q psy16707 95 KEHSVYLTKDGR----ISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 95 ~~~~IY~~~~GR----inva-gl~~~ni~~va~ai~~v 127 (420)
.+++|++...|. ++.+ -+++++||++.+++.++
T Consensus 399 ~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 436 (441)
T PRK05769 399 FKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEA 436 (441)
T ss_pred HhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 367899987763 3322 35889999999999876
No 493
>KOG2040|consensus
Probab=54.28 E-value=3.3e+02 Score=30.91 Aligned_cols=219 Identities=23% Similarity=0.271 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec----CCCHHHHH--HHHHhcceEEcCCCceecc---c
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT----GLNATQVE--KLIKEHSVYLTKDGRISMA---G 111 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~----gL~~~qv~--~L~~~~~IY~~~~GRinva---g 111 (420)
+-|++|..||...-.-|.+.|+..| |=...+-.|--+ |-+.+++. .+.++......++|-|.|| -
T Consensus 391 ~gL~~IArrvh~~T~~l~~~l~~ag------hel~~k~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDET 464 (1001)
T KOG2040|consen 391 HGLKEIARRVHNLTLILAEGLKNAG------HELQHKPFFDTLKIRCGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDET 464 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc------hhhccccccceEEEEecCcHHHHHHHHHhhcCceEEeecCceEEeeccc
Confidence 4689999999999999999998655 333344455443 44677764 4556667778999999887 3
Q ss_pred CCcCCHHHH-------------HHHHHhh--CCCcccchhhhccccCCChHHHH-------HHHHHccCCCCceeec---
Q psy16707 112 VTSKNVGYL-------------AKAIHAN--GSLPIRFQDARTSSVKVPSSNLL-------TEAFKKDTNVNKINLG--- 166 (420)
Q Consensus 112 l~~~ni~~v-------------a~ai~~v--~~~p~~~~~~~~~~~~~d~i~~l-------~~~~~~d~~~~kInL~--- 166 (420)
.+.++||.+ ++....- |+.|..|+.. .+. .--|+|.. ..-.++-.+ +-|.|.
T Consensus 465 v~~~DvddLl~vf~~~ss~~~~~E~~~~e~~~~~~s~f~Rt-s~~-L~hpVFn~yhSEt~lvRYm~kLen-KDlSLvhSM 541 (1001)
T KOG2040|consen 465 VTEKDVDDLLWVFNEESSVELVAESMGEECNGIPPSVFKRT-SPY-LTHPVFNSYHSETELVRYMKKLEN-KDLSLVHSM 541 (1001)
T ss_pred ccHHHHHHHHHHHccCChHHHHHHhhhhhccCCCCcccccC-Ccc-ccchhhhhcccHHHHHHHHHHhhc-cchhhhhhc
Confidence 444555444 3333222 4455556544 333 33445432 111111111 112221
Q ss_pred --ccccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCC---CCHHHHHHHHHHH---cCCCCccccCCceeeecccCC
Q psy16707 167 --VGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPII---GAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 167 --iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~---G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~ 237 (420)
.|.+. .-+.+.-+....--.. ...|-|.|.. |..++-+.+.+++ -|.| .+ ++||.++
T Consensus 542 iPLGSCT------MKLNsttEmmPiTwp~fanIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D-------~~-s~QPNsG 607 (1001)
T KOG2040|consen 542 IPLGSCT------MKLNSTTEMMPITWPEFANIHPFAPVEQAQGYQQLFTELEKDLCEITGFD-------SF-SLQPNSG 607 (1001)
T ss_pred cccccee------eeccccceeccccchhhccCCCCCchHHHhhHHHHHHHHHHHhheeeccc-------ce-eecCCCC
Confidence 22211 1111221111110000 2468888865 4444444444444 2333 23 3555444
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCC-CCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG-EKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~-gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
..|--.+|+..-..+..-... -...+||--.-+.-..-..++|++
T Consensus 608 ----------------A~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmk 653 (1001)
T KOG2040|consen 608 ----------------AQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMK 653 (1001)
T ss_pred ----------------cccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCE
Confidence 233334455444444332221 357888888877777888899987
No 494
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=52.98 E-value=61 Score=33.83 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=25.5
Q ss_pred HhcceEEcCCC------ceec-ccCCcCCHHHHHHHHHhh
Q psy16707 95 KEHSVYLTKDG------RISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 95 ~~~~IY~~~~G------Rinv-agl~~~ni~~va~ai~~v 127 (420)
.+++|++...| |++. ..++..+|+.+.++|.++
T Consensus 387 ~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~ 426 (433)
T PRK08117 387 LEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEA 426 (433)
T ss_pred HHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 56788886544 4565 588999999999998876
No 495
>PRK09567 nirA ferredoxin-nitrite reductase; Reviewed
Probab=52.68 E-value=47 Score=36.63 Aligned_cols=65 Identities=15% Similarity=0.139 Sum_probs=52.1
Q ss_pred CCCcccccccccee-------ec--------CCCHHHHHHHH---Hhcc---eEEcCCCceecccCCcCCHHHHHHHHHh
Q psy16707 68 KPWNHITDQIGMFC-------YT--------GLNATQVEKLI---KEHS---VYLTKDGRISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 68 ~~w~~i~~Q~GmFs-------~~--------gL~~~qv~~L~---~~~~---IY~~~~GRinvagl~~~ni~~va~ai~~ 126 (420)
.++....+=.|||. |. -||++|...|- ++|+ |-+|.-+.|.+=||...|++.+.++|.+
T Consensus 96 ~~~~~~~k~~G~y~~~~~~~~fM~RvripgG~lt~~Q~~~la~ia~~yg~g~~~lTTRq~iQlhgI~~~d~~~i~~~l~~ 175 (593)
T PRK09567 96 PADNFRWKYHGLFYVAPAQDSYMCRLRIPNGILTHWQFAGLADLADRHGGGYSHVTTRANLQLREIPPEHAVPVLEGLVD 175 (593)
T ss_pred hhhhhhhccceEEEEcccCCeEEEEEEeCCeecCHHHHHHHHHHHHHHCCCeEEEeccccEEeccCCHHHHHHHHHHHHH
Confidence 45555666666662 21 49999988775 6774 8899999999999999999999999999
Q ss_pred hCCCcc
Q psy16707 127 NGSLPI 132 (420)
Q Consensus 127 v~~~p~ 132 (420)
+|..+.
T Consensus 176 ~GL~t~ 181 (593)
T PRK09567 176 LGLTAR 181 (593)
T ss_pred CCCCCC
Confidence 987664
No 496
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=52.68 E-value=1.2e+02 Score=31.54 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=67.4
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccc----eee-cC
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLT-E--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM----FCY-TG 84 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~-e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~Gm----Fs~-~g 84 (420)
.++.+||.|+-......|. |.. | |+.+.+|-+.+.+.|++.++++|.-.-+.--...+.. |.+ .+
T Consensus 235 ~t~~TP~v~~l~a~~~~l~-------~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~ 307 (374)
T TIGR01365 235 STINTPSMLCVEDWLDALK-------WAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDP 307 (374)
T ss_pred CCCCChHHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCc
Confidence 5677899987776666552 443 2 8999999999999999999988731112100011222 333 12
Q ss_pred -CC----------HHHHHHHHHhcceEEc-CCC-------ce-ecccCCcCCHHHHHHHHHhh
Q psy16707 85 -LN----------ATQVEKLIKEHSVYLT-KDG-------RI-SMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 -L~----------~~qv~~L~~~~~IY~~-~~G-------Ri-nvagl~~~ni~~va~ai~~v 127 (420)
.+ ..++...-++++|.+- .-| || |+.-++..+|+.+.++|+-+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 308 AIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred cccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 42 3455544445587554 222 34 46668889999999988754
No 497
>PRK07046 aminotransferase; Validated
Probab=52.02 E-value=50 Score=35.03 Aligned_cols=33 Identities=24% Similarity=0.191 Sum_probs=27.5
Q ss_pred HhCCeEEeCCC---cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 386 KEHSVYLTKDG---RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 386 ~e~~Vy~~p~g---Ris~agl~~~ni~~la~AI~~vv 419 (420)
.++||++.|.+ +++.+ +++++|+++.+++++++
T Consensus 413 ~~~Gv~~~~~~~~~~~~p~-~t~~did~~~~~~~~~l 448 (453)
T PRK07046 413 LNRGVLITPFHNMMLVCPA-TTAADVDRLVAAFDACL 448 (453)
T ss_pred HHCCCEEecccCcEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 46899998864 56765 89999999999999875
No 498
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=51.80 E-value=59 Score=34.23 Aligned_cols=77 Identities=16% Similarity=0.260 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCccc--CCCCceEEec--CC--CHHHHHHHHHhCCeEEeCCC---cEEEc-ccCCCC
Q psy16707 339 DRIISMRQSLKDNLQKE-GSNKPWNHI--TDQIGMFCYT--GL--NATQVEKLIKEHSVYLTKDG---RISMA-GVTSKN 407 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~-g~~~~w~~i--~~q~GmF~~~--~l--~~~~v~~Ll~e~~Vy~~p~g---Ris~a-gl~~~n 407 (420)
++++++-+.|.+.|+++ + +..+ ....|++.-+ +- ....+...+.+.||++.+.| ||.-. .+++++
T Consensus 336 ~~~~~~g~~l~~~L~~~~~----~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g~~l~~~Ppl~it~~e 411 (429)
T PRK06173 336 QNIQRIEAQLKQELAPAAE----FDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFGKLVYIMPPFIISPDE 411 (429)
T ss_pred HHHHHHHHHHHHHHHHhhc----CCCeeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecCCEEEEeCCccCCHHH
Confidence 44444444555556543 2 2223 2245776633 21 23445444467899998876 44322 168899
Q ss_pred HHHHHHHHHHHh
Q psy16707 408 VGYLAKAIHAVT 419 (420)
Q Consensus 408 i~~la~AI~~vv 419 (420)
++++.+++.+++
T Consensus 412 i~~~~~~l~~~l 423 (429)
T PRK06173 412 LSQLTSGLLRVL 423 (429)
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 499
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=51.54 E-value=59 Score=34.60 Aligned_cols=80 Identities=15% Similarity=0.153 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC-CcccCCCCceEEecCC--C--HHHH-HHHHHhCCeEEeCC---C---cEEEc-ccCC
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKP-WNHITDQIGMFCYTGL--N--ATQV-EKLIKEHSVYLTKD---G---RISMA-GVTS 405 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~-w~~i~~q~GmF~~~~l--~--~~~v-~~Ll~e~~Vy~~p~---g---Ris~a-gl~~ 405 (420)
++.+++-+.|.+.|+++....+ +---....|++.-+-+ + ...+ +.| .++||++.+. + ||..+ .+++
T Consensus 357 ~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~~~~~i~~~l-~~~Gvl~~~~~~~~~~lr~~Ppl~~t~ 435 (459)
T PRK11522 357 AQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEM-FRQRVLVAGTLNNAKTIRIEPPLTLTI 435 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCchHHHHHHHHH-HHCCeEEEecCCCCCEEEEECCccCCH
Confidence 4555555555556655431100 1111224566664322 1 1233 455 5689999764 2 55544 2688
Q ss_pred CCHHHHHHHHHHHh
Q psy16707 406 KNVGYLAKAIHAVT 419 (420)
Q Consensus 406 ~ni~~la~AI~~vv 419 (420)
++|+++.+++.+++
T Consensus 436 ~~id~~l~~l~~~l 449 (459)
T PRK11522 436 EQCEQVLKAARKAL 449 (459)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998875
No 500
>KOG1549|consensus
Probab=51.05 E-value=75 Score=33.74 Aligned_cols=101 Identities=15% Similarity=0.017 Sum_probs=66.2
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCC--CCCCCCCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLD--KEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISI 231 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~--~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~ 231 (420)
...+.|.|=.| ...+..+.|-+|....... +.. ..|-+-.+..+=|+.+|+++ +.+ +..|
T Consensus 40 ~~~~~vyld~~------at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI-nAd-----~~dI-- 105 (428)
T KOG1549|consen 40 HGTRPVYLDNQ------ATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI-NAD-----PSDI-- 105 (428)
T ss_pred CCCccEEEecC------cCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh-CCC-----CCcE--
Confidence 34455555555 4678888998888876543 111 12223445677788888866 443 1224
Q ss_pred ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC----EEEEcCCCCCCcHHHHhh
Q psy16707 232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK----VIYVPTPTWGNHIPICKH 294 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd----~VlvpdP~w~ny~~i~~~ 294 (420)
+-|.|+|.+..+.+.-+..+ + +| .|+..+--+++...-++.
T Consensus 106 --------------------iFts~ATEs~Nlvl~~v~~~-~-~~~~~k~iitl~~eH~~v~~s~~~ 150 (428)
T KOG1549|consen 106 --------------------VFTSGATESNNLVLKGVARF-F-GDKTKKHIITLQTEHPCVLDSCRA 150 (428)
T ss_pred --------------------EEeCCchHHHHHHHHHhhcc-c-cccccceEEEecccCcchhHHHHH
Confidence 67999999999988655433 3 56 899988888888765543
Done!