Query psy16707
Match_columns 420
No_of_seqs 305 out of 1832
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 19:57:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h51_A Aspartate aminotransfer 100.0 1.2E-57 4.1E-62 469.6 24.5 256 139-420 24-415 (420)
2 3k7y_A Aspartate aminotransfer 100.0 4E-41 1.4E-45 344.1 22.9 258 139-420 8-403 (405)
3 3meb_A Aspartate aminotransfer 100.0 3.2E-34 1.1E-38 294.1 27.2 266 132-419 22-441 (448)
4 4f4e_A Aromatic-amino-acid ami 100.0 1.7E-33 5.7E-38 284.9 25.9 271 128-420 18-420 (420)
5 7aat_A Aspartate aminotransfer 100.0 1.5E-31 5.2E-36 267.4 26.7 261 139-420 7-401 (401)
6 4eu1_A Mitochondrial aspartate 100.0 2.4E-30 8.1E-35 260.1 23.5 267 128-420 10-409 (409)
7 3fsl_A Aromatic-amino-acid ami 100.0 5.9E-29 2E-33 247.5 26.5 260 139-419 5-397 (397)
8 4h51_A Aspartate aminotransfer 100.0 1E-30 3.5E-35 269.1 12.8 125 3-128 290-414 (420)
9 1yaa_A Aspartate aminotransfer 99.9 1.1E-24 3.8E-29 218.7 25.1 264 134-419 4-408 (412)
10 2q7w_A Aspartate aminotransfer 99.9 6.8E-25 2.3E-29 218.1 23.1 260 139-419 5-396 (396)
11 1ajs_A Aspartate aminotransfer 99.9 3.6E-24 1.2E-28 214.6 25.9 264 134-419 5-408 (412)
12 2ay1_A Aroat, aromatic amino a 99.9 2.1E-24 7.3E-29 214.7 23.5 256 139-418 5-392 (394)
13 3rq1_A Aminotransferase class 99.9 9.5E-24 3.3E-28 212.3 17.3 253 135-419 10-412 (418)
14 3dyd_A Tyrosine aminotransfera 99.9 3.5E-23 1.2E-27 210.1 17.4 244 139-419 31-421 (427)
15 3t18_A Aminotransferase class 99.9 5.7E-22 2E-26 199.0 16.9 251 133-416 7-408 (413)
16 3tcm_A Alanine aminotransferas 99.8 1.5E-19 5.1E-24 188.4 21.4 268 117-419 43-491 (500)
17 3qgu_A LL-diaminopimelate amin 99.8 1.9E-17 6.7E-22 168.0 22.9 246 131-420 36-438 (449)
18 1b5p_A Protein (aspartate amin 99.8 1.8E-17 6.1E-22 165.2 21.2 245 134-419 4-382 (385)
19 3k7y_A Aspartate aminotransfer 99.8 5.4E-19 1.8E-23 180.4 10.0 123 4-127 275-401 (405)
20 3fvs_A Kynurenine--oxoglutarat 99.7 1.1E-17 3.9E-22 167.6 15.0 247 134-419 6-419 (422)
21 3e2y_A Kynurenine-oxoglutarate 99.7 1.1E-17 3.7E-22 166.8 13.8 241 139-417 5-408 (410)
22 3g7q_A Valine-pyruvate aminotr 99.7 2.6E-17 9E-22 164.4 13.5 241 143-419 13-410 (417)
23 3h14_A Aminotransferase, class 99.7 1.6E-16 5.6E-21 157.8 19.1 238 139-419 8-379 (391)
24 1gd9_A Aspartate aminotransfer 99.7 3.1E-16 1E-20 155.5 20.4 241 133-419 2-383 (389)
25 3jtx_A Aminotransferase; NP_28 99.7 3.5E-16 1.2E-20 155.1 18.4 237 139-420 6-396 (396)
26 3b46_A Aminotransferase BNA3; 99.7 8.1E-16 2.8E-20 157.0 19.9 237 142-417 33-442 (447)
27 3meb_A Aspartate aminotransfer 99.7 1.5E-16 5.3E-21 162.8 14.5 124 4-127 311-440 (448)
28 3aow_A Putative uncharacterize 99.7 3.9E-16 1.3E-20 160.1 17.2 247 134-419 54-442 (448)
29 3nra_A Aspartate aminotransfer 99.7 5E-17 1.7E-21 161.6 9.9 237 140-419 14-402 (407)
30 3ppl_A Aspartate aminotransfer 99.7 2.6E-16 8.8E-21 158.9 14.1 244 142-419 10-417 (427)
31 3bwn_A AT1G70560, L-tryptophan 99.7 1E-16 3.5E-21 161.3 10.8 224 158-419 20-384 (391)
32 2o1b_A Aminotransferase, class 99.7 9.9E-16 3.4E-20 154.0 17.9 237 139-419 26-400 (404)
33 2x5d_A Probable aminotransfera 99.7 7.8E-16 2.7E-20 154.4 16.9 244 131-419 7-395 (412)
34 1o4s_A Aspartate aminotransfer 99.7 1.7E-15 5.7E-20 151.1 18.9 233 139-419 18-386 (389)
35 2z61_A Probable aspartate amin 99.7 4.7E-15 1.6E-19 146.2 21.7 241 139-420 6-369 (370)
36 1j32_A Aspartate aminotransfer 99.7 1.6E-15 5.4E-20 150.3 18.3 240 134-419 3-384 (388)
37 3ei9_A LL-diaminopimelate amin 99.7 4.1E-15 1.4E-19 150.1 20.4 216 159-417 55-423 (432)
38 1u08_A Hypothetical aminotrans 99.6 1.2E-14 4.1E-19 144.1 21.9 238 130-416 4-384 (386)
39 3ezs_A Aminotransferase ASPB; 99.6 4.3E-15 1.5E-19 146.3 17.5 229 142-420 4-373 (376)
40 3ihj_A Alanine aminotransferas 99.6 5E-15 1.7E-19 154.4 18.9 212 178-419 102-490 (498)
41 3ele_A Amino transferase; RER0 99.6 1.4E-15 4.8E-20 151.2 13.6 236 134-419 4-393 (398)
42 2o0r_A RV0858C (N-succinyldiam 99.6 1.9E-14 6.6E-19 144.2 20.3 236 134-419 3-393 (411)
43 2zc0_A Alanine glyoxylate tran 99.6 3.5E-14 1.2E-18 141.5 21.9 247 134-419 7-401 (407)
44 3g0t_A Putative aminotransfera 99.6 4.5E-15 1.5E-19 149.3 15.0 237 147-419 31-434 (437)
45 2hox_A ALLIIN lyase 1; cystein 99.6 1.6E-15 5.4E-20 155.0 11.3 228 160-419 56-422 (427)
46 1v2d_A Glutamine aminotransfer 99.6 2.6E-14 8.9E-19 141.4 19.3 235 134-419 3-368 (381)
47 2r2n_A Kynurenine/alpha-aminoa 99.6 7.7E-16 2.6E-20 155.7 8.4 251 134-419 7-421 (425)
48 2gb3_A Aspartate aminotransfer 99.6 3.7E-14 1.3E-18 142.2 19.7 241 134-419 16-399 (409)
49 3f6t_A Aspartate aminotransfer 99.6 1.4E-15 4.7E-20 160.0 9.4 221 161-419 104-522 (533)
50 2x5f_A Aspartate_tyrosine_phen 99.6 9.4E-15 3.2E-19 147.4 14.5 240 143-419 34-426 (430)
51 3fdb_A Beta C-S lyase, putativ 99.6 1.1E-14 3.8E-19 143.2 14.5 218 159-420 22-374 (377)
52 1yiz_A Kynurenine aminotransfe 99.6 4.3E-14 1.5E-18 142.2 19.2 247 131-420 12-427 (429)
53 2dou_A Probable N-succinyldiam 99.6 2.6E-14 8.9E-19 141.1 17.0 228 146-419 9-375 (376)
54 3d6k_A Putative aminotransfera 99.6 1.5E-14 5.3E-19 146.0 15.5 239 145-419 19-415 (422)
55 3if2_A Aminotransferase; YP_26 99.6 4.1E-15 1.4E-19 150.4 10.9 254 133-419 3-437 (444)
56 3kax_A Aminotransferase, class 99.6 6.8E-14 2.3E-18 137.6 18.5 219 158-420 22-383 (383)
57 3p1t_A Putative histidinol-pho 99.6 1.4E-13 4.8E-18 133.2 20.3 208 159-420 15-335 (337)
58 2zyj_A Alpha-aminodipate amino 99.6 1.2E-13 4E-18 137.7 19.9 241 134-419 10-390 (397)
59 3ez1_A Aminotransferase MOCR f 99.6 1.1E-14 3.9E-19 146.2 11.3 227 160-419 25-412 (423)
60 4f4e_A Aromatic-amino-acid ami 99.5 3.7E-14 1.3E-18 143.0 14.0 124 4-127 295-418 (420)
61 1vp4_A Aminotransferase, putat 99.5 1.7E-14 5.8E-19 145.7 11.5 242 139-419 25-415 (425)
62 3piu_A 1-aminocyclopropane-1-c 99.5 9.6E-14 3.3E-18 140.4 17.0 224 157-419 34-429 (435)
63 7aat_A Aspartate aminotransfer 99.5 4.3E-14 1.5E-18 140.8 12.9 125 3-127 275-399 (401)
64 1bw0_A TAT, protein (tyrosine 99.5 3E-13 1E-17 135.4 19.0 240 144-419 16-410 (416)
65 3get_A Histidinol-phosphate am 99.5 2.3E-12 7.7E-17 126.5 22.9 221 142-420 15-365 (365)
66 4dq6_A Putative pyridoxal phos 99.5 7E-13 2.4E-17 130.6 18.6 218 159-420 31-391 (391)
67 3ly1_A Putative histidinol-pho 99.5 6E-13 2.1E-17 129.8 17.5 211 154-419 10-349 (354)
68 1xi9_A Putative transaminase; 99.5 4.4E-13 1.5E-17 134.1 16.7 245 134-419 12-400 (406)
69 3hdo_A Histidinol-phosphate am 99.5 3.1E-12 1E-16 125.7 22.4 209 159-419 25-352 (360)
70 3dzz_A Putative pyridoxal 5'-p 99.5 6.5E-13 2.2E-17 130.9 17.3 217 159-419 26-386 (391)
71 3asa_A LL-diaminopimelate amin 99.5 3.3E-13 1.1E-17 134.9 15.0 215 157-419 30-390 (400)
72 4eu1_A Mitochondrial aspartate 99.5 2.4E-13 8E-18 136.2 12.9 125 3-127 283-407 (409)
73 3euc_A Histidinol-phosphate am 99.5 1.6E-12 5.6E-17 127.6 18.3 213 157-420 27-366 (367)
74 3ffh_A Histidinol-phosphate am 99.4 3.4E-12 1.2E-16 125.1 19.2 207 158-419 30-363 (363)
75 3l8a_A METC, putative aminotra 99.4 7.8E-13 2.7E-17 133.3 14.7 218 159-420 60-420 (421)
76 1c7n_A Cystalysin; transferase 99.4 8.1E-12 2.8E-16 124.0 18.9 213 160-419 31-390 (399)
77 1iay_A ACC synthase 2, 1-amino 99.4 6.4E-12 2.2E-16 126.5 17.4 221 160-419 36-424 (428)
78 3cq5_A Histidinol-phosphate am 99.4 9.4E-12 3.2E-16 122.8 17.0 209 162-420 32-366 (369)
79 3op7_A Aminotransferase class 99.4 1.1E-11 3.9E-16 121.9 17.1 185 195-419 55-368 (375)
80 3fsl_A Aromatic-amino-acid ami 99.4 7.4E-12 2.5E-16 124.0 14.8 123 5-127 274-396 (397)
81 3fkd_A L-threonine-O-3-phospha 99.3 6.1E-12 2.1E-16 122.9 12.5 205 160-419 15-339 (350)
82 1d2f_A MALY protein; aminotran 99.3 2.9E-11 9.9E-16 119.8 17.1 213 160-419 28-386 (390)
83 1fg7_A Histidinol phosphate am 99.3 5.4E-11 1.8E-15 117.3 16.3 201 161-418 30-354 (356)
84 2zy4_A L-aspartate beta-decarb 99.3 2.5E-11 8.7E-16 128.2 14.8 102 162-295 106-214 (546)
85 1uu1_A Histidinol-phosphate am 99.3 9E-11 3.1E-15 114.3 16.3 206 160-419 19-335 (335)
86 3ftb_A Histidinol-phosphate am 99.2 1E-10 3.4E-15 114.1 15.0 205 158-419 24-358 (361)
87 3b1d_A Betac-S lyase; HET: PLP 98.9 1E-12 3.5E-17 130.9 0.0 217 160-420 31-391 (392)
88 1lc5_A COBD, L-threonine-O-3-p 99.2 3.3E-10 1.1E-14 111.4 17.9 216 146-419 11-357 (364)
89 3a2b_A Serine palmitoyltransfe 99.2 3.5E-10 1.2E-14 112.3 15.9 215 159-419 42-389 (398)
90 1yaa_A Aspartate aminotransfer 99.1 4.5E-10 1.5E-14 112.2 13.6 124 4-127 284-407 (412)
91 2ay1_A Aroat, aromatic amino a 99.1 4.7E-10 1.6E-14 111.0 13.2 123 6-128 271-393 (394)
92 2dr1_A PH1308 protein, 386AA l 99.0 2.6E-09 9.1E-14 104.6 14.7 205 169-419 21-376 (386)
93 1ajs_A Aspartate aminotransfer 99.0 2.7E-09 9.1E-14 106.4 14.0 123 5-127 285-407 (412)
94 2q7w_A Aspartate aminotransfer 99.0 2.5E-09 8.6E-14 105.7 13.0 122 6-127 274-395 (396)
95 1t3i_A Probable cysteine desul 99.0 2.9E-09 1E-13 105.5 13.2 104 161-298 28-145 (420)
96 1eg5_A Aminotransferase; PLP-d 99.0 5.2E-09 1.8E-13 102.2 14.5 212 169-419 3-373 (384)
97 3tqx_A 2-amino-3-ketobutyrate 99.0 6.2E-09 2.1E-13 102.6 14.7 82 332-419 295-393 (399)
98 2z9v_A Aspartate aminotransfer 99.0 3.3E-09 1.1E-13 104.5 12.0 87 329-419 262-368 (392)
99 1vjo_A Alanine--glyoxylate ami 98.9 1.4E-08 4.7E-13 100.2 15.8 103 308-420 272-393 (393)
100 1svv_A Threonine aldolase; str 98.9 1.7E-08 5.9E-13 97.6 15.2 208 158-419 11-355 (359)
101 2ch1_A 3-hydroxykynurenine tra 98.9 1.2E-08 4.2E-13 100.5 13.8 84 332-419 278-380 (396)
102 4eb5_A Probable cysteine desul 98.9 4.8E-08 1.6E-12 95.4 16.8 211 169-419 2-370 (382)
103 2huf_A Alanine glyoxylate amin 98.8 1.7E-08 5.9E-13 99.4 12.7 82 334-419 281-380 (393)
104 1iug_A Putative aspartate amin 98.8 2.2E-08 7.4E-13 96.8 12.2 82 333-419 249-345 (352)
105 3kki_A CAI-1 autoinducer synth 98.8 1.3E-07 4.3E-12 94.4 17.5 78 335-419 307-401 (409)
106 1elu_A L-cysteine/L-cystine C- 98.8 2.3E-08 7.7E-13 98.1 11.1 80 334-418 295-388 (390)
107 4hvk_A Probable cysteine desul 98.8 1.9E-07 6.5E-12 90.6 17.2 86 331-419 251-370 (382)
108 1kmj_A Selenocysteine lyase; p 98.8 8.9E-08 3E-12 94.1 14.5 83 333-419 298-402 (406)
109 1bs0_A Protein (8-amino-7-oxon 98.8 6.8E-08 2.3E-12 95.1 13.4 210 159-418 38-383 (384)
110 2w8t_A SPT, serine palmitoyltr 98.7 1.8E-07 6.2E-12 94.4 16.3 212 159-419 63-412 (427)
111 2e7j_A SEP-tRNA:Cys-tRNA synth 98.7 3.1E-08 1.1E-12 96.6 10.2 101 159-297 6-115 (371)
112 1m32_A 2-aminoethylphosphonate 98.7 1.4E-07 4.7E-12 91.3 13.2 82 334-420 264-363 (366)
113 3nnk_A Ureidoglycine-glyoxylat 98.7 1.5E-07 5.1E-12 93.0 13.6 86 330-419 283-387 (411)
114 3f9t_A TDC, L-tyrosine decarbo 98.7 1.4E-06 4.9E-11 84.8 20.4 84 332-420 305-396 (397)
115 2eh6_A Acoat, acetylornithine 98.7 1.1E-07 3.7E-12 93.2 12.4 78 336-419 290-375 (375)
116 3isl_A Purine catabolism prote 98.7 2.4E-07 8.2E-12 91.7 15.0 82 334-419 288-387 (416)
117 1fc4_A 2-amino-3-ketobutyrate 98.7 6.6E-08 2.3E-12 95.8 10.8 80 334-419 298-394 (401)
118 3rq1_A Aminotransferase class 98.7 7.7E-08 2.6E-12 96.1 11.3 114 10-127 294-411 (418)
119 2dkj_A Serine hydroxymethyltra 98.7 2.1E-07 7.3E-12 91.9 13.9 84 332-419 277-385 (407)
120 3cai_A Possible aminotransfera 98.7 3E-07 1E-11 91.0 14.7 86 329-418 296-405 (406)
121 3lvm_A Cysteine desulfurase; s 98.6 5.6E-07 1.9E-11 89.5 16.2 83 331-419 279-396 (423)
122 2bwn_A 5-aminolevulinate synth 98.6 3E-07 1E-11 91.2 14.1 80 335-419 301-397 (401)
123 3dr4_A Putative perosamine syn 98.6 2.7E-07 9.3E-12 91.3 13.7 99 158-298 20-119 (391)
124 1vef_A Acetylornithine/acetyl- 98.6 3.7E-07 1.3E-11 90.3 13.8 83 336-420 305-395 (395)
125 3zrp_A Serine-pyruvate aminotr 98.6 1.7E-07 5.7E-12 91.5 11.1 81 334-419 264-360 (384)
126 2yrr_A Aminotransferase, class 98.5 2.3E-07 8E-12 89.2 9.6 81 334-419 253-350 (353)
127 3tcm_A Alanine aminotransferas 98.5 8.6E-07 2.9E-11 92.0 13.6 112 12-127 347-490 (500)
128 3kgw_A Alanine-glyoxylate amin 98.5 6.3E-07 2.1E-11 87.6 11.7 82 334-419 285-385 (393)
129 2po3_A 4-dehydrase; external a 98.5 2.3E-06 7.9E-11 85.9 15.8 93 164-298 20-113 (424)
130 1b9h_A AHBA synthase, protein 98.5 2.6E-06 8.9E-11 84.0 15.2 85 181-298 17-101 (388)
131 1e5e_A MGL, methionine gamma-l 98.4 1.1E-06 3.9E-11 88.4 12.4 101 161-298 19-128 (404)
132 3vax_A Putative uncharacterize 98.4 1E-06 3.4E-11 86.9 11.5 83 331-419 279-397 (400)
133 3dyd_A Tyrosine aminotransfera 98.4 3.2E-07 1.1E-11 92.5 7.6 112 6-127 291-420 (427)
134 3n0l_A Serine hydroxymethyltra 98.4 2.9E-06 9.8E-11 84.1 12.8 85 331-419 277-386 (417)
135 4adb_A Succinylornithine trans 98.3 2E-06 6.7E-11 85.1 11.4 83 335-419 302-397 (406)
136 1jg8_A L-ALLO-threonine aldola 98.3 8E-07 2.8E-11 86.0 8.1 86 161-287 4-89 (347)
137 1qz9_A Kynureninase; kynurenin 98.3 7E-06 2.4E-10 81.3 15.0 82 333-419 302-399 (416)
138 1mdo_A ARNB aminotransferase; 98.3 8E-06 2.8E-10 80.3 15.2 83 181-298 20-102 (393)
139 2vi8_A Serine hydroxymethyltra 98.3 4.1E-06 1.4E-10 82.6 13.0 85 332-420 276-385 (405)
140 3ecd_A Serine hydroxymethyltra 98.3 3.5E-06 1.2E-10 83.4 12.2 84 332-419 286-394 (425)
141 1sff_A 4-aminobutyrate aminotr 98.3 2.7E-06 9.4E-11 84.7 10.8 99 160-289 41-142 (426)
142 1rv3_A Serine hydroxymethyltra 98.3 3.4E-06 1.1E-10 87.2 11.0 84 332-419 321-428 (483)
143 3mad_A Sphingosine-1-phosphate 98.2 1.8E-05 6.3E-10 81.8 16.3 83 333-419 374-466 (514)
144 2a7v_A Serine hydroxymethyltra 98.2 1.2E-05 4E-10 84.1 14.6 84 332-419 331-438 (490)
145 2bkw_A Alanine-glyoxylate amin 98.2 1.7E-05 5.8E-10 77.3 14.8 82 334-420 279-382 (385)
146 3f0h_A Aminotransferase; RER07 98.2 6.8E-06 2.3E-10 80.2 11.8 82 334-419 276-371 (376)
147 2aeu_A Hypothetical protein MJ 98.2 1.7E-05 5.8E-10 78.9 14.3 82 161-290 29-113 (374)
148 3t18_A Aminotransferase class 98.2 6.4E-06 2.2E-10 82.0 11.2 111 10-125 293-408 (413)
149 3gbx_A Serine hydroxymethyltra 98.2 7.6E-06 2.6E-10 80.9 11.3 84 332-419 285-393 (420)
150 3uwc_A Nucleotide-sugar aminot 98.2 1.3E-05 4.4E-10 78.2 12.5 96 160-298 6-101 (374)
151 3gju_A Putative aminotransfera 98.2 1.1E-05 3.9E-10 82.2 12.5 102 159-287 50-156 (460)
152 3h7f_A Serine hydroxymethyltra 98.2 6.6E-06 2.3E-10 83.7 10.5 83 333-419 299-411 (447)
153 3ruy_A Ornithine aminotransfer 98.2 3.1E-05 1.1E-09 76.3 15.1 84 335-420 302-392 (392)
154 4a6r_A Omega transaminase; tra 98.1 1.1E-05 3.6E-10 82.3 11.5 104 159-289 49-157 (459)
155 3mc6_A Sphingosine-1-phosphate 98.1 0.00014 4.7E-09 74.6 19.8 83 333-419 342-434 (497)
156 2c0r_A PSAT, phosphoserine ami 98.1 4.5E-05 1.6E-09 74.3 15.5 104 306-419 237-358 (362)
157 3nx3_A Acoat, acetylornithine 98.1 2.7E-05 9.2E-10 76.9 13.2 99 159-289 35-138 (395)
158 3i4j_A Aminotransferase, class 98.1 2.1E-05 7.1E-10 78.9 12.4 101 160-289 29-135 (430)
159 3k28_A Glutamate-1-semialdehyd 98.1 2.4E-05 8.1E-10 78.7 12.8 95 159-286 52-146 (429)
160 3l44_A Glutamate-1-semialdehyd 98.1 8.1E-06 2.8E-10 82.0 9.1 97 159-288 54-150 (434)
161 3dxv_A Alpha-amino-epsilon-cap 98.1 1.8E-05 6E-10 79.7 11.4 101 159-287 42-142 (439)
162 2ord_A Acoat, acetylornithine 98.1 1.5E-05 5.2E-10 78.8 10.5 82 335-419 301-394 (397)
163 1v72_A Aldolase; PLP-dependent 98.0 2.9E-05 1E-09 74.8 11.9 78 337-419 265-350 (356)
164 3e9k_A Kynureninase; kynurenin 98.0 4.8E-05 1.6E-09 77.3 13.9 86 334-420 354-459 (465)
165 3fq8_A Glutamate-1-semialdehyd 98.0 1.8E-05 6.3E-10 79.2 10.4 96 159-287 51-146 (427)
166 2x5f_A Aspartate_tyrosine_phen 98.0 2.2E-05 7.5E-10 78.7 10.6 113 11-127 304-425 (430)
167 3ihj_A Alanine aminotransferas 98.0 2.9E-05 9.8E-10 80.6 11.2 117 6-127 341-489 (498)
168 2oat_A Ornithine aminotransfer 98.0 0.00022 7.6E-09 72.4 17.2 81 336-419 344-436 (439)
169 1wyu_B Glycine dehydrogenase s 98.0 0.00077 2.6E-08 69.1 21.4 82 332-419 340-438 (474)
170 2pb2_A Acetylornithine/succiny 98.0 5.8E-05 2E-09 76.0 12.7 81 336-419 321-415 (420)
171 4ffc_A 4-aminobutyrate aminotr 97.9 6E-05 2.1E-09 76.9 12.7 100 159-286 63-162 (453)
172 3nyt_A Aminotransferase WBPE; 97.9 0.00011 3.7E-09 72.1 14.1 87 177-298 12-98 (367)
173 3qgu_A LL-diaminopimelate amin 97.9 3E-05 1E-09 78.1 10.0 112 6-127 311-436 (449)
174 2rfv_A Methionine gamma-lyase; 97.9 6E-05 2E-09 75.0 11.5 111 154-298 14-130 (398)
175 2cy8_A D-phgat, D-phenylglycin 97.9 0.00023 7.8E-09 72.0 15.3 96 160-288 57-152 (453)
176 3f6t_A Aspartate aminotransfer 97.8 1.1E-05 3.7E-10 84.6 4.8 100 23-127 387-521 (533)
177 3dod_A Adenosylmethionine-8-am 97.8 9.5E-05 3.3E-09 74.9 11.6 101 159-287 43-148 (448)
178 3nra_A Aspartate aminotransfer 97.8 2.5E-05 8.7E-10 76.9 6.7 113 5-127 273-401 (407)
179 3oks_A 4-aminobutyrate transam 97.8 0.00026 8.9E-09 72.0 14.1 100 159-286 60-159 (451)
180 1z7d_A Ornithine aminotransfer 97.8 0.00018 6.3E-09 72.8 12.6 81 336-419 333-426 (433)
181 3a8u_X Omega-amino acid--pyruv 97.7 0.00029 1E-08 71.0 13.4 81 336-419 349-444 (449)
182 3i5t_A Aminotransferase; pyrid 97.7 0.00046 1.6E-08 71.0 15.0 103 159-289 53-160 (476)
183 3hmu_A Aminotransferase, class 97.7 0.00019 6.4E-09 73.9 11.5 103 159-288 54-161 (472)
184 4e77_A Glutamate-1-semialdehyd 97.6 0.00056 1.9E-08 68.5 14.0 98 159-289 52-149 (429)
185 2e7u_A Glutamate-1-semialdehyd 97.6 0.00049 1.7E-08 68.8 13.5 80 335-419 320-424 (424)
186 3ez1_A Aminotransferase MOCR f 97.6 0.00019 6.6E-09 71.4 10.5 121 5-127 272-411 (423)
187 3ppl_A Aspartate aminotransfer 97.6 0.00047 1.6E-08 68.9 12.6 119 5-127 279-416 (427)
188 1w23_A Phosphoserine aminotran 97.6 0.00019 6.7E-09 69.3 9.5 82 334-419 260-357 (360)
189 3ffr_A Phosphoserine aminotran 97.5 0.0012 4.1E-08 63.4 14.2 81 334-419 264-361 (362)
190 2epj_A Glutamate-1-semialdehyd 97.5 0.0005 1.7E-08 69.0 11.9 79 336-419 325-428 (434)
191 3d6k_A Putative aminotransfera 97.5 0.00031 1.1E-08 70.3 10.3 120 5-127 277-414 (422)
192 3g7q_A Valine-pyruvate aminotr 97.5 0.00037 1.3E-08 68.9 10.6 118 5-127 269-409 (417)
193 1ibj_A CBL, cystathionine beta 97.5 7.1E-05 2.4E-09 77.3 5.4 102 161-298 90-198 (464)
194 1s0a_A Adenosylmethionine-8-am 97.5 0.0011 3.9E-08 66.2 13.8 81 336-419 331-421 (429)
195 3bwn_A AT1G70560, L-tryptophan 97.5 7.2E-05 2.5E-09 74.6 4.8 118 6-127 239-383 (391)
196 3n5m_A Adenosylmethionine-8-am 97.5 0.0012 4E-08 66.7 13.9 99 159-288 48-152 (452)
197 1wyu_A Glycine dehydrogenase ( 97.5 0.0022 7.5E-08 64.6 15.8 81 333-419 341-437 (438)
198 1zod_A DGD, 2,2-dialkylglycine 97.5 0.00045 1.5E-08 69.1 10.5 80 337-419 326-429 (433)
199 1gc0_A Methionine gamma-lyase; 97.5 0.0013 4.6E-08 65.3 13.9 91 175-298 35-131 (398)
200 1ax4_A Tryptophanase; tryptoph 97.4 4.7E-05 1.6E-09 76.9 3.0 125 139-296 11-143 (467)
201 3lws_A Aromatic amino acid bet 97.4 0.00037 1.3E-08 67.5 9.2 74 340-417 260-351 (357)
202 3fvs_A Kynurenine--oxoglutarat 97.4 0.00014 4.8E-09 72.1 6.2 117 6-127 268-418 (422)
203 3ei9_A LL-diaminopimelate amin 97.4 0.00039 1.3E-08 69.5 9.4 113 4-126 297-423 (432)
204 3e2y_A Kynurenine-oxoglutarate 97.4 0.00013 4.6E-09 71.9 5.8 117 6-127 261-409 (410)
205 3piu_A 1-aminocyclopropane-1-c 97.4 0.00044 1.5E-08 69.3 9.0 105 16-127 303-428 (435)
206 3tfu_A Adenosylmethionine-8-am 97.4 0.0012 3.9E-08 67.7 12.3 82 336-419 360-450 (457)
207 2ez2_A Beta-tyrosinase, tyrosi 97.3 0.00016 5.6E-09 72.8 5.5 101 157-297 30-135 (456)
208 1o69_A Aminotransferase; struc 97.2 0.00033 1.1E-08 69.5 6.1 87 176-298 7-95 (394)
209 2c81_A Glutamine-2-deoxy-scyll 97.2 0.00077 2.6E-08 67.1 8.2 90 177-298 12-105 (418)
210 3pj0_A LMO0305 protein; struct 97.2 0.00063 2.1E-08 65.8 7.3 75 339-417 261-354 (359)
211 3jtx_A Aminotransferase; NP_28 97.2 0.00092 3.2E-08 65.5 8.6 109 6-127 266-394 (396)
212 1b5p_A Protein (aspartate amin 97.1 0.0021 7.2E-08 63.2 10.4 113 6-127 255-381 (385)
213 2oga_A Transaminase; PLP-depen 97.1 0.00028 9.5E-09 70.1 4.0 97 160-298 30-126 (399)
214 2dgk_A GAD-beta, GADB, glutama 97.1 0.016 5.4E-07 58.5 16.9 122 146-298 27-162 (452)
215 1iay_A ACC synthase 2, 1-amino 97.0 0.0021 7.1E-08 64.1 9.9 104 17-127 299-423 (428)
216 4e1o_A HDC, histidine decarbox 97.0 0.038 1.3E-06 56.7 19.6 84 332-419 376-475 (481)
217 2fnu_A Aminotransferase; prote 97.0 0.001 3.5E-08 64.5 7.0 89 176-298 8-97 (375)
218 2zc0_A Alanine glyoxylate tran 97.0 0.0024 8.4E-08 62.8 9.9 105 17-127 278-400 (407)
219 3ju7_A Putative PLP-dependent 97.0 0.00078 2.7E-08 67.1 6.3 90 175-298 10-101 (377)
220 3hbx_A GAD 1, glutamate decarb 97.0 0.029 9.8E-07 58.0 18.2 84 332-419 338-441 (502)
221 3g0t_A Putative aminotransfera 96.9 0.0012 4.1E-08 65.7 6.9 113 7-127 300-433 (437)
222 3ezs_A Aminotransferase ASPB; 96.9 0.0024 8.3E-08 62.0 8.6 107 5-127 251-371 (376)
223 3if2_A Aminotransferase; YP_26 96.8 0.004 1.4E-07 62.2 9.9 118 5-127 295-436 (444)
224 3frk_A QDTB; aminotransferase, 96.8 0.00072 2.5E-08 66.1 3.8 95 162-298 5-99 (373)
225 3ly1_A Putative histidinol-pho 96.8 0.0068 2.3E-07 58.3 10.7 98 16-127 242-348 (354)
226 2x3l_A ORN/Lys/Arg decarboxyla 96.8 0.0096 3.3E-07 60.6 12.2 68 197-297 51-118 (446)
227 3ndn_A O-succinylhomoserine su 96.7 0.034 1.2E-06 56.1 16.0 44 252-298 100-147 (414)
228 3p1t_A Putative histidinol-pho 96.7 0.0059 2E-07 58.2 9.8 100 15-127 226-333 (337)
229 2zyj_A Alpha-aminodipate amino 96.7 0.0073 2.5E-07 59.4 10.6 103 18-127 270-389 (397)
230 3fdb_A Beta C-S lyase, putativ 96.7 0.0019 6.3E-08 62.8 6.1 107 12-127 251-372 (377)
231 1gd9_A Aspartate aminotransfer 96.7 0.0092 3.1E-07 58.3 11.1 113 6-127 254-382 (389)
232 3get_A Histidinol-phosphate am 96.6 0.0068 2.3E-07 58.6 9.7 97 17-127 257-363 (365)
233 2fyf_A PSAT, phosphoserine ami 96.6 0.0043 1.5E-07 61.3 8.4 104 305-419 271-395 (398)
234 3vp6_A Glutamate decarboxylase 96.6 0.038 1.3E-06 57.2 15.8 93 178-297 107-214 (511)
235 3b8x_A WBDK, pyridoxamine 5-ph 96.5 0.0031 1.1E-07 62.0 6.7 90 175-298 9-103 (390)
236 2oqx_A Tryptophanase; lyase, p 96.5 0.001 3.4E-08 67.1 3.2 121 139-293 9-140 (467)
237 2o1b_A Aminotransferase, class 96.5 0.0095 3.2E-07 59.1 10.3 111 6-127 274-399 (404)
238 3aow_A Putative uncharacterize 96.5 0.0096 3.3E-07 60.4 10.2 106 16-127 319-441 (448)
239 2huf_A Alanine glyoxylate amin 96.5 0.022 7.4E-07 55.5 12.4 104 14-127 257-379 (393)
240 3kax_A Aminotransferase, class 96.5 0.011 3.7E-07 57.3 10.1 105 14-127 261-381 (383)
241 1o4s_A Aspartate aminotransfer 96.5 0.0062 2.1E-07 59.9 8.4 108 6-127 267-385 (389)
242 3euc_A Histidinol-phosphate am 96.5 0.01 3.6E-07 57.4 9.8 99 17-128 256-365 (367)
243 3h14_A Aminotransferase, class 96.5 0.014 4.7E-07 57.2 10.6 112 5-127 250-378 (391)
244 3acz_A Methionine gamma-lyase; 96.4 0.028 9.5E-07 55.7 13.0 88 178-298 32-125 (389)
245 2z61_A Probable aspartate amin 96.4 0.01 3.4E-07 57.7 9.5 112 6-127 243-367 (370)
246 2r2n_A Kynurenine/alpha-aminoa 96.4 0.0094 3.2E-07 59.5 9.5 120 6-127 283-420 (425)
247 1v2d_A Glutamine aminotransfer 96.4 0.0047 1.6E-07 60.3 7.1 114 6-128 243-368 (381)
248 2gb3_A Aspartate aminotransfer 96.4 0.018 6.1E-07 57.0 11.2 110 6-127 266-398 (409)
249 1xi9_A Putative transaminase; 96.3 0.012 4.2E-07 58.0 9.4 110 7-127 273-399 (406)
250 3hdo_A Histidinol-phosphate am 96.3 0.024 8.2E-07 54.8 11.2 99 16-128 243-352 (360)
251 2dou_A Probable N-succinyldiam 96.3 0.021 7.1E-07 55.6 10.6 108 7-127 252-374 (376)
252 3k40_A Aromatic-L-amino-acid d 96.2 0.091 3.1E-06 53.8 15.8 84 332-419 369-468 (475)
253 3a9z_A Selenocysteine lyase; P 96.2 0.015 5.3E-07 57.6 9.7 92 160-288 17-123 (432)
254 3l8a_A METC, putative aminotra 96.2 0.01 3.5E-07 59.1 8.3 105 13-127 298-418 (421)
255 1js3_A DDC;, DOPA decarboxylas 96.2 0.17 5.9E-06 51.3 17.6 84 332-419 372-471 (486)
256 2hox_A ALLIIN lyase 1; cystein 96.2 0.0052 1.8E-07 62.1 6.0 122 5-127 272-421 (427)
257 1vp4_A Aminotransferase, putat 96.2 0.0072 2.5E-07 60.3 6.8 106 17-127 291-414 (425)
258 1j32_A Aspartate aminotransfer 96.1 0.019 6.4E-07 56.0 9.5 112 6-127 258-383 (388)
259 3ele_A Amino transferase; RER0 96.1 0.0091 3.1E-07 58.5 7.1 105 7-127 276-392 (398)
260 3qhx_A Cystathionine gamma-syn 96.1 0.11 3.7E-06 51.6 15.0 70 196-298 57-132 (392)
261 1fg7_A Histidinol phosphate am 96.0 0.018 6.1E-07 56.1 8.8 104 12-127 240-354 (356)
262 3cog_A Cystathionine gamma-lya 96.0 0.011 3.9E-07 59.1 7.3 64 201-298 65-132 (403)
263 4dq6_A Putative pyridoxal phos 96.0 0.02 6.9E-07 55.5 8.8 105 14-127 269-389 (391)
264 1cs1_A CGS, protein (cystathio 95.9 0.089 3E-06 51.6 13.5 65 201-298 50-118 (386)
265 3bb8_A CDP-4-keto-6-deoxy-D-gl 95.8 0.0089 3E-07 60.0 5.8 86 179-298 41-133 (437)
266 2z9v_A Aspartate aminotransfer 95.8 0.069 2.4E-06 51.8 12.0 86 38-127 262-367 (392)
267 2x5d_A Probable aminotransfera 95.8 0.021 7.3E-07 56.4 8.4 101 16-127 276-394 (412)
268 3b46_A Aminotransferase BNA3; 95.8 0.021 7.2E-07 57.5 8.3 103 14-126 305-442 (447)
269 1c7n_A Cystalysin; transferase 95.8 0.025 8.5E-07 55.4 8.6 104 15-127 270-389 (399)
270 3dzz_A Putative pyridoxal 5'-p 95.8 0.027 9.1E-07 54.6 8.8 105 14-127 265-385 (391)
271 3ffh_A Histidinol-phosphate am 95.7 0.033 1.1E-06 53.8 9.2 96 17-127 255-362 (363)
272 2z67_A O-phosphoseryl-tRNA(SEC 95.7 0.18 6E-06 51.1 14.8 83 332-420 346-456 (456)
273 3ke3_A Putative serine-pyruvat 95.6 0.029 1E-06 55.1 8.5 103 307-419 251-373 (379)
274 1yiz_A Kynurenine aminotransfe 95.6 0.022 7.5E-07 56.5 7.6 104 18-127 288-425 (429)
275 2eo5_A 419AA long hypothetical 95.5 0.048 1.6E-06 54.3 9.8 76 337-419 330-415 (419)
276 2cb1_A O-acetyl homoserine sul 95.5 0.017 5.9E-07 57.6 6.4 93 169-298 24-122 (412)
277 3cai_A Possible aminotransfera 95.5 0.051 1.8E-06 53.1 9.6 90 35-127 293-405 (406)
278 3op7_A Aminotransferase class 95.4 0.035 1.2E-06 53.8 8.1 101 17-127 254-367 (375)
279 3kgw_A Alanine-glyoxylate amin 95.3 0.09 3.1E-06 50.7 10.8 82 42-127 284-384 (393)
280 1elu_A L-cysteine/L-cystine C- 95.3 0.058 2E-06 52.1 9.3 82 43-128 295-389 (390)
281 2o0r_A RV0858C (N-succinyldiam 95.3 0.049 1.7E-06 53.7 8.8 81 43-128 285-393 (411)
282 2ch1_A 3-hydroxykynurenine tra 95.1 0.096 3.3E-06 50.9 10.4 105 14-127 256-379 (396)
283 1bw0_A TAT, protein (tyrosine 95.1 0.047 1.6E-06 53.8 8.1 102 17-127 290-409 (416)
284 3nnk_A Ureidoglycine-glyoxylat 95.1 0.15 5.2E-06 49.6 11.8 86 38-127 282-386 (411)
285 2dr1_A PH1308 protein, 386AA l 95.1 0.22 7.7E-06 47.8 12.7 104 13-127 253-375 (386)
286 3cq5_A Histidinol-phosphate am 95.1 0.066 2.3E-06 51.9 8.9 96 17-127 261-364 (369)
287 2qma_A Diaminobutyrate-pyruvat 95.0 0.73 2.5E-05 46.9 16.9 83 333-419 391-493 (497)
288 1m32_A 2-aminoethylphosphonate 95.0 0.18 6E-06 48.0 11.4 100 17-127 242-361 (366)
289 1iug_A Putative aspartate amin 94.9 0.12 4.2E-06 49.0 10.2 103 15-127 228-344 (352)
290 1d2f_A MALY protein; aminotran 94.9 0.08 2.7E-06 51.6 8.9 106 13-127 264-385 (390)
291 1u08_A Hypothetical aminotrans 94.9 0.036 1.2E-06 54.0 6.4 100 14-125 266-384 (386)
292 2okj_A Glutamate decarboxylase 94.8 0.49 1.7E-05 48.3 14.9 84 332-419 382-499 (504)
293 4eb5_A Probable cysteine desul 94.7 0.16 5.5E-06 48.8 10.5 105 14-127 231-369 (382)
294 2eo5_A 419AA long hypothetical 94.4 0.06 2E-06 53.6 6.9 14 114-127 85-98 (419)
295 3n0l_A Serine hydroxymethyltra 94.4 0.18 6E-06 49.3 10.0 90 35-128 272-386 (417)
296 2yrr_A Aminotransferase, class 94.3 0.31 1.1E-05 46.0 11.3 85 39-127 248-349 (353)
297 1t3i_A Probable cysteine desul 94.2 0.23 7.8E-06 48.4 10.5 82 43-127 303-409 (420)
298 1qz9_A Kynureninase; kynurenin 94.2 0.12 4.1E-06 50.6 8.5 108 14-127 279-398 (416)
299 3f9t_A TDC, L-tyrosine decarbo 94.2 0.18 6.2E-06 48.4 9.5 85 39-128 303-395 (397)
300 3zrp_A Serine-pyruvate aminotr 94.1 0.28 9.6E-06 47.0 10.8 102 17-127 243-359 (384)
301 2ctz_A O-acetyl-L-homoserine s 94.0 0.08 2.7E-06 53.1 6.9 88 177-297 30-123 (421)
302 2cjg_A L-lysine-epsilon aminot 94.0 0.04 1.4E-06 55.7 4.6 82 336-419 352-445 (449)
303 1ax4_A Tryptophanase; tryptoph 94.0 0.071 2.4E-06 53.4 6.4 73 343-419 330-438 (467)
304 3ftb_A Histidinol-phosphate am 93.9 0.12 4.3E-06 49.4 7.8 99 16-127 245-357 (361)
305 3asa_A LL-diaminopimelate amin 93.9 0.062 2.1E-06 52.8 5.7 103 13-127 272-389 (400)
306 3ou5_A Serine hydroxymethyltra 93.9 0.48 1.6E-05 49.2 12.4 89 326-419 325-438 (490)
307 3fkd_A L-threonine-O-3-phospha 93.8 0.049 1.7E-06 52.3 4.6 100 15-127 225-338 (350)
308 1vjo_A Alanine--glyoxylate ami 93.7 0.49 1.7E-05 45.8 11.7 101 17-127 272-391 (393)
309 1eg5_A Aminotransferase; PLP-d 93.7 0.25 8.5E-06 47.4 9.4 102 16-127 237-372 (384)
310 3e77_A Phosphoserine aminotran 93.5 0.21 7.3E-06 50.1 8.9 103 305-419 246-372 (377)
311 3m5u_A Phosphoserine aminotran 93.4 0.21 7E-06 49.7 8.5 105 304-419 233-357 (361)
312 3f0h_A Aminotransferase; RER07 93.4 0.25 8.6E-06 47.5 8.9 81 43-127 276-370 (376)
313 3isl_A Purine catabolism prote 93.1 0.47 1.6E-05 46.1 10.6 103 15-127 265-386 (416)
314 4ao9_A Beta-phenylalanine amin 93.1 0.99 3.4E-05 46.4 13.3 37 382-419 406-443 (454)
315 1ohv_A 4-aminobutyrate aminotr 93.1 0.092 3.1E-06 53.7 5.6 82 336-419 375-468 (472)
316 1svv_A Threonine aldolase; str 93.1 0.11 3.6E-06 49.5 5.7 81 43-127 266-354 (359)
317 1kmj_A Selenocysteine lyase; p 93.0 0.29 9.9E-06 47.3 8.6 83 42-127 298-401 (406)
318 3ri6_A O-acetylhomoserine sulf 92.8 0.082 2.8E-06 53.7 4.7 44 252-298 101-148 (430)
319 3e77_A Phosphoserine aminotran 92.8 0.38 1.3E-05 48.2 9.5 107 13-127 245-371 (377)
320 3qm2_A Phosphoserine aminotran 92.8 0.23 7.8E-06 49.9 7.9 106 306-419 262-382 (386)
321 3tqx_A 2-amino-3-ketobutyrate 92.7 0.29 9.9E-06 47.4 8.2 81 41-127 295-392 (399)
322 2ez2_A Beta-tyrosinase, tyrosi 92.5 0.075 2.6E-06 53.2 3.7 77 339-419 316-428 (456)
323 3gbx_A Serine hydroxymethyltra 92.4 0.21 7.2E-06 48.7 6.8 84 40-127 284-392 (420)
324 2bwn_A 5-aminolevulinate synth 92.1 0.65 2.2E-05 45.2 10.0 81 43-127 300-396 (401)
325 3b1d_A Betac-S lyase; HET: PLP 91.4 0.027 9.3E-07 55.2 0.0 103 16-127 271-389 (392)
326 1pff_A Methionine gamma-lyase; 91.9 0.2 6.7E-06 47.6 5.8 44 252-298 17-64 (331)
327 2oqx_A Tryptophanase; lyase, p 91.8 0.085 2.9E-06 52.8 3.3 76 339-419 328-439 (467)
328 1lc5_A COBD, L-threonine-O-3-p 91.6 0.3 1E-05 47.0 6.9 97 17-127 247-356 (364)
329 4hvk_A Probable cysteine desul 91.6 0.79 2.7E-05 43.6 9.7 85 40-127 251-369 (382)
330 2dkj_A Serine hydroxymethyltra 91.4 1.6 5.5E-05 42.2 11.9 83 41-127 277-384 (407)
331 1uu1_A Histidinol-phosphate am 91.0 0.98 3.3E-05 42.9 9.7 96 17-127 232-334 (335)
332 1rv3_A Serine hydroxymethyltra 90.8 0.47 1.6E-05 48.5 7.7 83 41-127 321-427 (483)
333 1w23_A Phosphoserine aminotran 90.3 1.1 3.9E-05 42.5 9.5 109 12-127 233-356 (360)
334 3a2b_A Serine palmitoyltransfe 90.1 0.74 2.5E-05 44.7 8.2 80 42-127 292-388 (398)
335 2fq6_A Cystathionine beta-lyas 90.1 0.36 1.2E-05 48.6 6.0 38 252-292 101-138 (415)
336 2bkw_A Alanine-glyoxylate amin 89.8 2.4 8.1E-05 40.5 11.4 80 43-127 279-380 (385)
337 3hvy_A Cystathionine beta-lyas 89.4 0.39 1.3E-05 48.9 5.6 36 254-292 98-134 (427)
338 3qm2_A Phosphoserine aminotran 89.2 0.99 3.4E-05 45.2 8.3 106 14-127 261-381 (386)
339 3mc6_A Sphingosine-1-phosphate 88.9 0.97 3.3E-05 45.7 8.2 84 42-127 342-433 (497)
340 3m5u_A Phosphoserine aminotran 88.8 1.2 4.1E-05 44.1 8.7 108 12-127 232-356 (361)
341 3lvm_A Cysteine desulfurase; s 88.8 2.1 7.1E-05 41.7 10.2 83 40-127 279-395 (423)
342 1bs0_A Protein (8-amino-7-oxon 88.8 0.76 2.6E-05 44.4 7.0 81 42-128 287-384 (384)
343 1qgn_A Protein (cystathionine 88.7 0.35 1.2E-05 49.4 4.7 88 177-298 86-180 (445)
344 2eh6_A Acoat, acetylornithine 88.6 0.94 3.2E-05 43.4 7.5 77 45-127 290-374 (375)
345 1sff_A 4-aminobutyrate aminotr 88.2 0.41 1.4E-05 47.0 4.7 80 45-127 319-420 (426)
346 1fc4_A 2-amino-3-ketobutyrate 88.1 1.2 4.2E-05 43.1 8.0 79 43-127 298-393 (401)
347 3vax_A Putative uncharacterize 87.8 0.91 3.1E-05 43.9 6.9 83 40-127 279-396 (400)
348 2w8t_A SPT, serine palmitoyltr 87.6 0.79 2.7E-05 45.5 6.4 81 42-127 313-411 (427)
349 3jzl_A Putative cystathionine 87.3 1.1 3.7E-05 45.1 7.3 36 254-292 83-119 (409)
350 2vi8_A Serine hydroxymethyltra 87.3 1.1 3.8E-05 43.3 7.2 83 41-127 276-383 (405)
351 2a7v_A Serine hydroxymethyltra 86.7 3.3 0.00011 42.8 10.7 94 34-131 324-441 (490)
352 1n8p_A Cystathionine gamma-lya 86.7 0.26 8.9E-06 48.9 2.3 60 196-289 46-107 (393)
353 3i16_A Aluminum resistance pro 86.5 0.7 2.4E-05 47.0 5.4 36 254-292 97-133 (427)
354 1vef_A Acetylornithine/acetyl- 86.4 1.3 4.4E-05 43.0 7.0 82 44-127 304-393 (395)
355 3ecd_A Serine hydroxymethyltra 85.8 1.2 4.2E-05 43.2 6.6 83 41-127 286-393 (425)
356 2fyf_A PSAT, phosphoserine ami 85.5 3.6 0.00012 40.0 9.8 105 13-127 270-394 (398)
357 2yky_A Beta-transaminase; tran 85.5 0.17 5.7E-06 52.2 0.0 81 337-419 357-457 (465)
358 3mad_A Sphingosine-1-phosphate 85.1 2.6 8.9E-05 42.9 8.9 84 41-127 373-465 (514)
359 3ke3_A Putative serine-pyruvat 84.3 3.6 0.00012 39.9 9.2 100 17-127 252-372 (379)
360 2zy4_A L-aspartate beta-decarb 84.1 0.65 2.2E-05 48.5 3.9 80 43-127 409-518 (546)
361 2c0r_A PSAT, phosphoserine ami 83.9 3.1 0.00011 39.6 8.5 103 15-127 237-357 (362)
362 2cjg_A L-lysine-epsilon aminot 83.9 1.7 5.8E-05 43.6 6.7 102 160-292 54-174 (449)
363 3e9k_A Kynureninase; kynurenin 83.7 2.4 8.2E-05 42.4 7.8 108 14-127 330-457 (465)
364 3ht4_A Aluminum resistance pro 83.1 1.6 5.5E-05 44.1 6.3 39 253-294 88-127 (431)
365 3ruy_A Ornithine aminotransfer 82.8 1.6 5.3E-05 42.3 5.8 82 44-127 302-390 (392)
366 2e7j_A SEP-tRNA:Cys-tRNA synth 82.7 0.88 3E-05 43.4 3.9 78 45-127 267-366 (371)
367 2po3_A 4-dehydrase; external a 82.4 5 0.00017 39.4 9.5 84 41-127 257-382 (424)
368 1ohv_A 4-aminobutyrate aminotr 82.0 1.2 4E-05 45.4 4.7 107 159-293 62-197 (472)
369 3ffr_A Phosphoserine aminotran 81.5 7.9 0.00027 36.3 10.1 102 15-127 241-360 (362)
370 2e7u_A Glutamate-1-semialdehyd 80.1 1.9 6.5E-05 42.5 5.4 83 44-127 320-423 (424)
371 3n75_A LDC, lysine decarboxyla 79.9 1.7 5.9E-05 47.2 5.4 44 252-298 215-258 (715)
372 3kki_A CAI-1 autoinducer synth 79.7 3.5 0.00012 40.2 7.2 77 44-127 307-400 (409)
373 3h7f_A Serine hydroxymethyltra 79.0 11 0.00038 37.5 10.8 82 42-127 299-410 (447)
374 1v72_A Aldolase; PLP-dependent 79.0 6 0.00021 37.1 8.4 79 46-128 265-350 (356)
375 1mdo_A ARNB aminotransferase; 78.6 8.3 0.00028 36.9 9.4 85 39-127 255-382 (393)
376 2fnu_A Aminotransferase; prote 77.6 1 3.5E-05 43.0 2.4 81 334-419 246-369 (375)
377 3a9z_A Selenocysteine lyase; P 75.0 9.3 0.00032 37.2 8.7 83 332-419 302-425 (432)
378 3twe_A Alpha4H; unknown functi 74.6 4.6 0.00016 24.5 3.8 21 38-58 5-25 (27)
379 1c4k_A Protein (ornithine deca 74.6 2.2 7.4E-05 46.5 4.3 44 252-298 193-237 (730)
380 2c81_A Glutamine-2-deoxy-scyll 73.8 3.6 0.00012 40.2 5.4 82 334-419 265-411 (418)
381 4ao9_A Beta-phenylalanine amin 73.6 10 0.00034 38.8 8.8 32 96-127 410-442 (454)
382 3fq8_A Glutamate-1-semialdehyd 73.3 3.6 0.00012 40.4 5.2 38 89-127 383-423 (427)
383 3dr4_A Putative perosamine syn 71.4 11 0.00037 36.2 8.2 83 41-127 265-389 (391)
384 4adb_A Succinylornithine trans 71.1 2.2 7.7E-05 41.2 3.1 82 44-127 302-396 (406)
385 3nmy_A Xometc, cystathionine g 70.9 2.8 9.6E-05 41.7 3.8 36 252-291 86-121 (400)
386 2jis_A Cysteine sulfinic acid 70.8 10 0.00036 38.5 8.2 84 332-419 397-512 (515)
387 2vyc_A Biodegradative arginine 70.5 5.1 0.00017 43.6 6.0 44 252-298 225-268 (755)
388 2oga_A Transaminase; PLP-depen 67.9 8.6 0.00029 37.3 6.5 78 337-419 276-393 (399)
389 2aeu_A Hypothetical protein MJ 67.8 16 0.00055 35.4 8.5 74 54-127 274-367 (374)
390 2oat_A Ornithine aminotransfer 67.5 14 0.00049 36.6 8.3 78 45-127 344-435 (439)
391 2ord_A Acoat, acetylornithine 66.9 4.3 0.00015 39.3 4.1 81 44-127 301-393 (397)
392 1s0a_A Adenosylmethionine-8-am 66.6 11 0.00038 36.9 7.1 79 46-127 332-420 (429)
393 3k28_A Glutamate-1-semialdehyd 66.0 7.9 0.00027 38.1 5.9 36 90-127 384-423 (429)
394 4g3b_A Alpha4F3D; alpha helix, 65.6 9.6 0.00033 22.9 3.8 22 37-58 4-25 (26)
395 3tfu_A Adenosylmethionine-8-am 65.1 11 0.00038 37.9 6.9 81 45-127 360-449 (457)
396 3i5t_A Aminotransferase; pyrid 64.3 15 0.00051 37.1 7.7 81 45-127 350-450 (476)
397 3dxv_A Alpha-amino-epsilon-cap 63.2 3.9 0.00013 40.3 3.0 81 46-127 321-421 (439)
398 2epj_A Glutamate-1-semialdehyd 62.4 5.5 0.00019 39.2 3.9 82 45-127 325-427 (434)
399 1z7d_A Ornithine aminotransfer 62.2 18 0.0006 35.8 7.7 80 45-127 333-425 (433)
400 1o69_A Aminotransferase; struc 62.1 5.7 0.00019 38.6 4.0 81 334-419 245-384 (394)
401 4e77_A Glutamate-1-semialdehyd 62.0 6.3 0.00022 38.7 4.3 39 88-127 384-425 (429)
402 2pb2_A Acetylornithine/succiny 61.4 6.5 0.00022 38.8 4.3 80 45-127 321-414 (420)
403 3i4j_A Aminotransferase, class 61.1 8.1 0.00028 37.9 4.9 38 89-127 375-424 (430)
404 4atq_A 4-aminobutyrate transam 60.2 56 0.0019 33.1 11.2 39 381-420 408-453 (456)
405 3uwc_A Nucleotide-sugar aminot 59.9 23 0.00079 33.5 7.8 84 42-127 246-367 (374)
406 1zod_A DGD, 2,2-dialkylglycine 59.7 7.6 0.00026 38.0 4.4 79 46-127 326-428 (433)
407 3gju_A Putative aminotransfera 58.3 21 0.00071 35.5 7.5 80 43-127 351-452 (460)
408 3dod_A Adenosylmethionine-8-am 58.2 15 0.00053 36.3 6.4 39 88-127 397-439 (448)
409 1pff_A Methionine gamma-lyase; 57.5 4.2 0.00014 38.2 2.0 26 76-101 244-269 (331)
410 3hbx_A GAD 1, glutamate decarb 56.4 54 0.0019 33.2 10.4 84 40-127 337-440 (502)
411 3n5m_A Adenosylmethionine-8-am 56.0 16 0.00055 36.1 6.1 38 89-127 400-448 (452)
412 2cy8_A D-phgat, D-phenylglycin 55.7 13 0.00046 36.7 5.5 37 90-127 394-431 (453)
413 1wyu_B Glycine dehydrogenase s 55.3 38 0.0013 33.9 8.9 82 41-127 340-437 (474)
414 1jg8_A L-ALLO-threonine aldola 55.3 19 0.00064 33.7 6.2 72 52-127 260-342 (347)
415 3bb8_A CDP-4-keto-6-deoxy-D-gl 53.8 44 0.0015 32.7 9.0 78 339-420 311-434 (437)
416 2okj_A Glutamate decarboxylase 52.4 33 0.0011 34.5 7.9 85 41-128 382-499 (504)
417 3frk_A QDTB; aminotransferase, 52.2 18 0.00061 34.5 5.6 58 41-102 244-307 (373)
418 1b9h_A AHBA synthase, protein 51.2 29 0.00099 33.1 6.9 58 41-102 250-320 (388)
419 3l44_A Glutamate-1-semialdehyd 50.6 9 0.00031 37.6 3.2 37 90-127 387-426 (434)
420 3hmu_A Aminotransferase, class 50.6 22 0.00075 35.9 6.2 37 90-127 408-448 (472)
421 2dgk_A GAD-beta, GADB, glutama 50.3 81 0.0028 31.0 10.3 84 40-127 322-430 (452)
422 3a8u_X Omega-amino acid--pyruv 49.8 19 0.00066 35.4 5.5 79 45-127 349-443 (449)
423 1e5e_A MGL, methionine gamma-l 49.7 49 0.0017 32.2 8.5 25 77-102 309-335 (404)
424 1wyu_A Glycine dehydrogenase ( 49.5 40 0.0014 33.1 7.8 81 42-127 341-436 (438)
425 1js3_A DDC;, DOPA decarboxylas 49.1 37 0.0013 33.9 7.6 84 41-127 372-470 (486)
426 3nyt_A Aminotransferase WBPE; 48.5 55 0.0019 31.0 8.4 61 42-104 244-308 (367)
427 2z67_A O-phosphoseryl-tRNA(SEC 48.2 61 0.0021 32.2 9.0 85 41-127 346-454 (456)
428 4ffc_A 4-aminobutyrate aminotr 46.9 20 0.0007 35.7 5.2 36 91-127 403-445 (453)
429 3vp6_A Glutamate decarboxylase 45.8 35 0.0012 34.8 6.9 86 41-129 385-503 (511)
430 1c4k_A Protein (ornithine deca 44.5 83 0.0028 34.0 9.9 45 375-419 514-563 (730)
431 4a0g_A Adenosylmethionine-8-am 43.9 1.3 4.3E-05 49.0 -4.7 39 381-420 784-826 (831)
432 3k40_A Aromatic-L-amino-acid d 43.5 53 0.0018 33.0 7.7 86 40-128 368-468 (475)
433 3b8x_A WBDK, pyridoxamine 5-ph 43.1 72 0.0025 30.4 8.4 60 41-103 266-334 (390)
434 3nx3_A Acoat, acetylornithine 42.1 23 0.00079 34.0 4.6 51 76-127 331-391 (395)
435 2vyc_A Biodegradative arginine 40.7 85 0.0029 33.9 9.2 44 375-418 553-601 (755)
436 3ju7_A Putative PLP-dependent 39.4 39 0.0013 32.7 5.8 86 332-419 248-372 (377)
437 2yky_A Beta-transaminase; tran 45.0 6.5 0.00022 40.2 0.0 99 159-290 99-197 (465)
438 1zj8_A Probable ferredoxin-dep 36.9 49 0.0017 34.7 6.4 48 85-132 116-169 (566)
439 3r8n_R 30S ribosomal protein S 35.1 13 0.00045 27.1 1.1 40 89-132 6-51 (55)
440 3oks_A 4-aminobutyrate transam 34.5 29 0.001 34.4 4.1 37 90-127 404-447 (451)
441 3pj0_A LMO0305 protein; struct 33.2 2E+02 0.0069 26.5 9.7 75 49-126 262-354 (359)
442 4e1o_A HDC, histidine decarbox 32.3 93 0.0032 31.1 7.5 85 41-128 376-475 (481)
443 3i5g_C Myosin catalytic light 31.3 22 0.00076 30.1 2.2 41 84-132 2-45 (159)
444 2qma_A Diaminobutyrate-pyruvat 30.0 1E+02 0.0036 30.7 7.4 84 41-127 390-492 (497)
445 3i5g_B Myosin regulatory light 29.7 35 0.0012 28.6 3.2 42 83-132 8-50 (153)
446 3i1m_R 30S ribosomal protein S 28.0 20 0.00068 27.8 1.1 44 85-132 21-70 (75)
447 2x3l_A ORN/Lys/Arg decarboxyla 25.7 2.6E+02 0.0089 27.5 9.4 72 46-127 269-349 (446)
448 2xze_Q Charged multivesicular 25.3 39 0.0013 23.1 2.1 15 40-54 25-39 (40)
449 2jo8_A Serine/threonine-protei 25.3 1.1E+02 0.0036 22.0 4.4 29 326-354 22-50 (51)
450 1cee_B Wiskott-aldrich syndrom 25.2 49 0.0017 24.1 2.8 29 64-93 9-42 (59)
451 2rfv_A Methionine gamma-lyase; 23.6 2.6E+02 0.009 26.5 8.7 21 76-97 309-331 (398)
452 1mla_A Malonyl-coenzyme A acyl 23.6 1.2E+02 0.0041 28.7 6.1 49 76-128 129-187 (309)
453 2lhi_A Calmodulin, serine/thre 23.5 25 0.00085 30.3 1.1 42 83-132 3-45 (176)
454 2vqe_R 30S ribosomal protein S 22.6 28 0.00094 27.8 1.1 44 85-132 32-81 (88)
455 2lmt_A Calmodulin-related prot 22.2 39 0.0013 27.6 2.0 42 83-132 2-44 (148)
456 2uv8_G Fatty acid synthase sub 22.1 1.3E+02 0.0044 36.7 7.0 54 76-129 335-398 (2051)
457 4a6r_A Omega transaminase; tra 20.7 1.4E+02 0.0047 29.4 6.1 38 89-127 404-445 (459)
458 1qgn_A Protein (cystathionine 20.4 2.6E+02 0.009 27.8 8.2 20 397-419 423-442 (445)
459 1pp9_B Ubiquinol-cytochrome C 20.3 2.3E+02 0.0077 27.0 7.5 102 22-131 119-227 (439)
460 2cb1_A O-acetyl homoserine sul 20.1 5.1E+02 0.017 24.7 10.1 50 339-392 284-352 (412)
No 1
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=1.2e-57 Score=469.60 Aligned_cols=256 Identities=36% Similarity=0.631 Sum_probs=237.1
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
++..++||||+++++|++|+++ |||||||+|||+||+||++++|++|++.+.+++.+|+|+|+.|+++||+++++++||
T Consensus 24 v~~~p~d~i~~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g 102 (420)
T 4h51_A 24 IQAQAPDVIFDLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYG 102 (420)
T ss_dssp CCCCCCCHHHHHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred CCCCCCChHHHHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcC
Confidence 3455699999999999999887 999999999999999999999999999988777789999999999999999999999
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc--CCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF--FPGEKVIYVPTPTWGNHIPICKHTG 296 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--~p~gd~VlvpdP~w~ny~~i~~~aG 296 (420)
.+. ..+++.+ +||+|||||+++++.|+..+ +| ||+||||+|+|+||..+++.+|
T Consensus 103 ~~~---~~~~~~~--------------------~qt~ggtga~~~a~~~l~~~~~~p-gd~V~ip~P~w~~y~~i~~~aG 158 (420)
T 4h51_A 103 NTV---ELENLVA--------------------VQTLSGTGAVSLGAKLLTRVFDAE-TTPIYLSDPTWPNHYGVVKAAG 158 (420)
T ss_dssp ------CGGGEEE--------------------EEEEHHHHHHHHHHHHHTTTSCTT-TSCEEEEESCCTHHHHHHHHTT
T ss_pred CCc---cccccce--------------------eeecCchHHHHHHHHHHHHhcCCC-CCEEEEecCCchhHHHHHHHcC
Confidence 874 3567777 99999999999999988764 46 9999999999999999999999
Q ss_pred cc------------------------------------------------------------------------------
Q psy16707 297 LE------------------------------------------------------------------------------ 298 (420)
Q Consensus 297 ~~------------------------------------------------------------------------------ 298 (420)
++
T Consensus 159 ~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~ 238 (420)
T 4h51_A 159 WKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASG 238 (420)
T ss_dssp CCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTS
T ss_pred CeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccC
Confidence 85
Q ss_pred --------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhC
Q psy16707 299 --------------------------------------------------------KILIRAFYSSPPIHGARIVQEILG 322 (420)
Q Consensus 299 --------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~ 322 (420)
..+.|++++|||.++|++++.+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~ 318 (420)
T 4h51_A 239 SLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILS 318 (420)
T ss_dssp CHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred CcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhc
Confidence 346789999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcc
Q psy16707 323 DPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAG 402 (420)
Q Consensus 323 dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~ag 402 (420)
||+++++|+++++.|++||++||+.|++.|+++|++++|.|+++|+|||+|+|++++|++.| +|+|||++|+||||+||
T Consensus 319 d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~e~v~~L-~e~~Vy~~~~gRis~Ag 397 (420)
T 4h51_A 319 NNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLSKAQCEYC-QNHNIFITVSGRANMAG 397 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCHHHHHHH-HHTTEECCTTCEEEGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcCHHHHHHH-HhCCEEEcCCCEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999866 68999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhC
Q psy16707 403 VTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 403 l~~~ni~~la~AI~~vv~ 420 (420)
+|++||+++|+||++|||
T Consensus 398 l~~~ni~~~a~aI~~vvr 415 (420)
T 4h51_A 398 LTHETALMLAQTINDAVR 415 (420)
T ss_dssp CCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999999986
No 2
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=4e-41 Score=344.14 Aligned_cols=258 Identities=33% Similarity=0.558 Sum_probs=235.0
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHH-ccCCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVL-NKNLDKEYAPIIGAPDFGKLAAQLAY 217 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~-~~~~~~~Y~p~~G~~~fr~a~~~~~~ 217 (420)
++.+++|++|.+.+.++++.++++|||++|.|+|+||+++++++|++|.. +. ++...++|+|+.|+++||++++++++
T Consensus 8 ~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 86 (405)
T 3k7y_A 8 LENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIF 86 (405)
T ss_dssp CCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHc
Confidence 78899999999999999999999999999999999999999999999988 64 33568899999999999999999999
Q ss_pred CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
+.+...+.++++.+ ++|+||++|+++++.++..+.| |+|++++|+|++|..+++.+|+
T Consensus 87 ~~~~~~~~~~~i~i--------------------~~t~G~~~al~~~~~~l~~~~~--d~Vlv~~P~y~~~~~~~~~~g~ 144 (405)
T 3k7y_A 87 GNNSKYIEDKKICT--------------------IQCIGGTGAIFVLLEFLKMLNV--ETLYVTNPPYINHVNMIESRGF 144 (405)
T ss_dssp CSSCTTTTTTCEEE--------------------EEEEHHHHHHHHHHHHHHTTTC--CEEEEESSCCHHHHHHHHTTTC
T ss_pred CCCCccccccceEE--------------------EEcCchHHHHHHHHHHHHhcCC--CEEEEeCCCCHhHHHHHHHcCC
Confidence 98776666666544 8999999999999988876555 9999999999999999999987
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 145 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~ 224 (405)
T 3k7y_A 145 NLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNL 224 (405)
T ss_dssp EEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSST
T ss_pred eEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCc
Confidence 5
Q ss_pred ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707 299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP 324 (420)
Q Consensus 299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp 324 (420)
..+.|..|+++|.++|.+++.+|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 304 (405)
T 3k7y_A 225 EEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQ 304 (405)
T ss_dssp TGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCH
T ss_pred ccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCH
Confidence 11235678999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEE
Q psy16707 325 KLKAQWLTEVKGMADRIISMRQSLKDNLQ----KEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISM 400 (420)
Q Consensus 325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~----~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~ 400 (420)
++.++|.++++.|+++|+++|+.+++.|+ ++|.++.|.++++++|||.|++++++++++| +++||+++|+||||+
T Consensus 305 ~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~~~~~~L-~~~gV~v~p~~Ris~ 383 (405)
T 3k7y_A 305 NLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEHL-KTHHIYIINNGRINV 383 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGGGGTTTT-TTTTEECCTTSEEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCHHHHHHH-HHCCEeecCCCeEEE
Confidence 99999999999999999999999999999 8998888999999999999999998999888 999999999999999
Q ss_pred cccCCCCHHHHHHHHHHHhC
Q psy16707 401 AGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 401 agl~~~ni~~la~AI~~vv~ 420 (420)
|++++++|++++++|+++++
T Consensus 384 a~~~~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 384 SGITKNNVDYIADKICLSLS 403 (405)
T ss_dssp GGCCTTHHHHHHHHHHHHHH
T ss_pred eccCHHHHHHHHHHHHHHHh
Confidence 99999999999999999863
No 3
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=3.2e-34 Score=294.15 Aligned_cols=266 Identities=39% Similarity=0.657 Sum_probs=237.8
Q ss_pred ccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHH--ccCCCCCCCCCCCCHHHH
Q psy16707 132 IRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVL--NKNLDKEYAPIIGAPDFG 209 (420)
Q Consensus 132 ~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~--~~~~~~~Y~p~~G~~~fr 209 (420)
|.+.+. ++..++|+|+.+.+++++|.++++|||++|.|+|.++.+++.+.|++|...+. +...+++|.|..|.++||
T Consensus 22 ~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr 100 (448)
T 3meb_A 22 MSVFSG-FPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFL 100 (448)
T ss_dssp CCTTTT-CCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHH
T ss_pred hhHHhc-CCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHH
Confidence 444555 78889999999999999999999999999999999999999999999988876 234688999999999999
Q ss_pred HHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 210 ~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
++++++++|.+...+++++|+. +||.|||+|+.+++.++..+.| ||+|++++|+|++|.
T Consensus 101 ~~ia~~l~g~~~~~~~~~~i~~--------------------~~t~ggt~al~l~~~~~~~~~~-gd~Vlv~~p~~~~~~ 159 (448)
T 3meb_A 101 EAAQFLMFGKDSKAAQEGRIAS--------------------CQSLSGTGSLHIGFEFLHLWMP-KAEFYMPSTTWPNHY 159 (448)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEE--------------------EEESHHHHHHHHHHHHHHHHCT-TCCEEEESSCCTHHH
T ss_pred HHHHHHhcCCCccccCcCcEEE--------------------EECCcHHHHHHHHHHHHHHhCC-CCEEEECCCCCHhHH
Confidence 9999999988765566788876 8899999999997777777778 999999999999999
Q ss_pred HHHh----hcCcc-------------------------------------------------------------------
Q psy16707 290 PICK----HTGLE------------------------------------------------------------------- 298 (420)
Q Consensus 290 ~i~~----~aG~~------------------------------------------------------------------- 298 (420)
.+++ .+|++
T Consensus 160 ~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li 239 (448)
T 3meb_A 160 GIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAF 239 (448)
T ss_dssp HHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEE
Confidence 9999 66643
Q ss_pred -------------------------------------------------h--hh------------------------hh
Q psy16707 299 -------------------------------------------------K--IL------------------------IR 303 (420)
Q Consensus 299 -------------------------------------------------~--~~------------------------~r 303 (420)
. .. .|
T Consensus 240 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~ 319 (448)
T 3meb_A 240 FDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIR 319 (448)
T ss_dssp EEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHh
Confidence 1 11 24
Q ss_pred hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CCcccCCCCceEEecCCCH
Q psy16707 304 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK-----PWNHITDQIGMFCYTGLNA 378 (420)
Q Consensus 304 ~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~-----~w~~i~~q~GmF~~~~l~~ 378 (420)
..+++||.+++.+++.+|++++++.+|.++++.|+++++++|+.|.+.|++.|.++ +|.++.++.|||+|.+++.
T Consensus 320 ~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 399 (448)
T 3meb_A 320 KTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLTP 399 (448)
T ss_dssp TTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCCH
T ss_pred cccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCCH
Confidence 56788999999999999999999999999999999999999999999999998887 7999999999999999999
Q ss_pred HHHHHHHHhCCeEEeC-CCcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 379 TQVEKLIKEHSVYLTK-DGRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 379 ~~v~~Ll~e~~Vy~~p-~gRis~agl~~~ni~~la~AI~~vv 419 (420)
++++.|++++||++.| +||||++++++++|++++++|.+++
T Consensus 400 ~~~~~ll~~~gV~v~~G~gRis~a~~~~~~i~~~~~~l~~~l 441 (448)
T 3meb_A 400 EHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEAIHDAV 441 (448)
T ss_dssp HHHHHHHHHHCEEECSGGGEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCCcEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999999999999999 6899999999999999999999986
No 4
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.7e-33 Score=284.86 Aligned_cols=271 Identities=35% Similarity=0.640 Sum_probs=235.6
Q ss_pred CCCcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHH
Q psy16707 128 GSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPD 207 (420)
Q Consensus 128 ~~~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~ 207 (420)
+.-+|.++++ +..+++|+++.+.+.++++.++++|||++|.|+|+++.+++++.|++|.....++...+.|.|..|.++
T Consensus 18 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~ 96 (420)
T 4f4e_A 18 GPGSMSLFSA-VELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAA 96 (420)
T ss_dssp ----CCTTTT-CCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHH
T ss_pred CccccCHhhc-CCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHH
Confidence 4455678888 999999999999999999999999999999999999999999999999888776546789999999999
Q ss_pred HHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707 208 FGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN 287 (420)
Q Consensus 208 fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n 287 (420)
||+++++++.+.+...++++++. ++.|.|||+|+.+++.++..+.| ||+|++++|+|++
T Consensus 97 lr~~ia~~l~~~~~~~~~~~~~~--------------------i~~t~G~t~al~~~~~~~~~~~~-gd~Vlv~~p~~~~ 155 (420)
T 4f4e_A 97 YDASVQKLLLGDDSPLIAAGRVV--------------------TAQALGGTGALKIGADFLRTLNP-KAKVAISDPSWEN 155 (420)
T ss_dssp HHHHHHHHHHCTTCHHHHTTCEE--------------------EEEEEHHHHHHHHHHHHHHHHCT-TCCEEEEESCCHH
T ss_pred HHHHHHHHhcCCCccccccCceE--------------------EEECCccHHHHHHHHHHHHHhCC-CCEEEEeCCCcHh
Confidence 99999999988765434455222 27899999999999776666778 9999999999999
Q ss_pred cHHHHhhcCcc---------------------------------------------------------------------
Q psy16707 288 HIPICKHTGLE--------------------------------------------------------------------- 298 (420)
Q Consensus 288 y~~i~~~aG~~--------------------------------------------------------------------- 298 (420)
|..+++.+|++
T Consensus 156 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 235 (420)
T 4f4e_A 156 HRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDI 235 (420)
T ss_dssp HHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Confidence 99999988874
Q ss_pred ---------------------------------------------------------------hhhhhhccCCCchHHHH
Q psy16707 299 ---------------------------------------------------------------KILIRAFYSSPPIHGAR 315 (420)
Q Consensus 299 ---------------------------------------------------------------~~~~r~~~s~pp~~ga~ 315 (420)
....|..++++|.+++.
T Consensus 236 ~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
T 4f4e_A 236 AYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGA 315 (420)
T ss_dssp SCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHH
T ss_pred ccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHH
Confidence 01123578889999999
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC
Q psy16707 316 IVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD 395 (420)
Q Consensus 316 iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~ 395 (420)
+++.+|+++.++.+|.++++.++++++++|+.+.+.|++++.+..|.+..++.|||+|++++.+++..+++++||++.|+
T Consensus 316 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gI~v~~~ 395 (420)
T 4f4e_A 316 IVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVST 395 (420)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCHHHHHHHHHHHCEECCTT
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCCHHHHHHHHHhCCEEecCC
Confidence 99999999999999999999999999999999999999986544588888999999999999999999999999999999
Q ss_pred CcEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 396 GRISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 396 gRis~agl~~~ni~~la~AI~~vv~ 420 (420)
+|||++++++++|++++++|.++++
T Consensus 396 ~Ris~~~~~~~~i~~~~~~l~~~l~ 420 (420)
T 4f4e_A 396 GRICVAALNTRNLDVVANAIAAVLK 420 (420)
T ss_dssp SEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred CeEEEecCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999874
No 5
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.5e-31 Score=267.35 Aligned_cols=261 Identities=59% Similarity=0.980 Sum_probs=230.8
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
++..++|+++.+.+.++++.++++|||++|.|.|..+.+++.+.|+++...+..+..+..|.+..|.++||+++++++.+
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 86 (401)
T 7aat_A 7 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALG 86 (401)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred CCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcC
Confidence 56677999999999999999999999999999999998899999999988876544688999999999999999999987
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHh-cCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN-FFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~-~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
.++..+++++|.. ++|.|||+|+.+++..+.. +.| ||.|++++|+|++|..+++.+|+
T Consensus 87 ~~~~~~~~~~i~~--------------------v~t~G~~~al~~~~~~l~~~~~~-gd~Vlv~~p~~~~~~~~~~~~g~ 145 (401)
T 7aat_A 87 ENSEAFKSGRYVT--------------------VQGISGTGSLRVGANFLQRFFKF-SRDVYLPKPSWGNHTPIFRDAGL 145 (401)
T ss_dssp TTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHCTT-CCEEEEEESCCTTHHHHHHHTTC
T ss_pred CCccccccCceEE--------------------EecCcchHHHHHHHHHHHHhccC-CCEEEEcCCCchhHHHHHHHcCC
Confidence 7666666777765 6799999999998765542 357 99999999999999999988876
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 225 (401)
T 7aat_A 146 QLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDI 225 (401)
T ss_dssp EEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCH
T ss_pred eeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCc
Confidence 4
Q ss_pred ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707 299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP 324 (420)
Q Consensus 299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp 324 (420)
....++.++++|..++.+++.+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (401)
T 7aat_A 226 NRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTP 305 (401)
T ss_dssp HHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred cccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCH
Confidence 11124457788899999998899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccC
Q psy16707 325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVT 404 (420)
Q Consensus 325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~ 404 (420)
+++.+|.++++.++++++++|+.|.+.|+++|.++.|.+..++.|+|.|.+++.++++.|++++||++.|++|||+++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~~Ris~~~~~ 385 (401)
T 7aat_A 306 ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVA 385 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCCHHHHHHHHHhCCEeccCCCeEEeccCC
Confidence 99999999999999999999999999999998777788888999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhC
Q psy16707 405 SKNVGYLAKAIHAVTK 420 (420)
Q Consensus 405 ~~ni~~la~AI~~vv~ 420 (420)
+++|++++++|+++++
T Consensus 386 ~~~i~~~~~~l~~~~~ 401 (401)
T 7aat_A 386 SSNVGYLAHAIHQVTK 401 (401)
T ss_dssp TTTHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHhC
Confidence 9999999999999875
No 6
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.97 E-value=2.4e-30 Score=260.14 Aligned_cols=267 Identities=40% Similarity=0.691 Sum_probs=219.3
Q ss_pred CCCcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHH
Q psy16707 128 GSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPD 207 (420)
Q Consensus 128 ~~~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~ 207 (420)
|.|--.+.++ ++.+++|++|.+.+.++++.++++|||++|.|.|..+.+++.+.++++ .....+.|.|..|.++
T Consensus 10 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a-----~~~~~~~y~~~~g~~~ 83 (409)
T 4eu1_A 10 GTLEAQTQGP-GSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA-----TLGTNMDYAPVTGIAS 83 (409)
T ss_dssp ------------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTC-----CCCSCCCCCCTTCCHH
T ss_pred cchhhhHhhc-CCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhc-----CccccccCCCCCCcHH
Confidence 4444445566 888999999999999999999999999999998888888888888877 2346789999999999
Q ss_pred HHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707 208 FGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN 287 (420)
Q Consensus 208 fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n 287 (420)
||++++++++|.+...+++++|.. ++|.||+|++.++..++..+.+.||.|++++|+|++
T Consensus 84 lr~~ia~~~~~~~~~~~~~~~i~~--------------------~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~ 143 (409)
T 4eu1_A 84 FVEEAQKLCFGPTCAALRDGRIAS--------------------CQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPN 143 (409)
T ss_dssp HHHHHHHHHHCSSCHHHHTTCEEE--------------------EEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTH
T ss_pred HHHHHHHHHcCCCchhhccCceee--------------------eecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHh
Confidence 999999999887755455677765 689999999998776554443338999999999999
Q ss_pred cHHHHhhcCcc---------------------------------------------------------------------
Q psy16707 288 HIPICKHTGLE--------------------------------------------------------------------- 298 (420)
Q Consensus 288 y~~i~~~aG~~--------------------------------------------------------------------- 298 (420)
|..+++.+|++
T Consensus 144 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 223 (409)
T 4eu1_A 144 HESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDM 223 (409)
T ss_dssp HHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEec
Confidence 99999988874
Q ss_pred ----------------------------------------------------------------hhhhhhccCCCchHHH
Q psy16707 299 ----------------------------------------------------------------KILIRAFYSSPPIHGA 314 (420)
Q Consensus 299 ----------------------------------------------------------------~~~~r~~~s~pp~~ga 314 (420)
....+..++++|..++
T Consensus 224 ~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 303 (409)
T 4eu1_A 224 AYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGA 303 (409)
T ss_dssp SCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred cccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHH
Confidence 0112456778888999
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeC
Q psy16707 315 RIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK 394 (420)
Q Consensus 315 ~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p 394 (420)
.++...|.+++++.+|.++++.++++++++|+.+.+.|++.|.++.|....++.|+|.|.+++.+++++|++++||++.|
T Consensus 304 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~p 383 (409)
T 4eu1_A 304 WVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLTREQVELLRSEYHIYMTL 383 (409)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCCHHHHHHHHHHHCEECCT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCCHHHHHHHHHcCCEEEcC
Confidence 98988899988889999999999999999999999999999888889988899999999999999999999999999999
Q ss_pred CCcEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 395 DGRISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 395 ~gRis~agl~~~ni~~la~AI~~vv~ 420 (420)
++||++++.++++|++++++|.++++
T Consensus 384 ~~Ri~~~~~~~~~i~~~~~~l~~~l~ 409 (409)
T 4eu1_A 384 NGRAAVSGLNSTNVEYVSQAIHNVTK 409 (409)
T ss_dssp TCEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred CCEEEEEecCHhhHHHHHHHHHHHhC
Confidence 99999999999999999999999875
No 7
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.97 E-value=5.9e-29 Score=247.47 Aligned_cols=260 Identities=39% Similarity=0.645 Sum_probs=224.3
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHH-HHccCCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEI-VLNKNLDKEYAPIIGAPDFGKLAAQLAY 217 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~-~~~~~~~~~Y~p~~G~~~fr~a~~~~~~ 217 (420)
++..++|+++.+.+.+++|..+++|||++|.|.|+++.+++++.|++|... ...+...+.|.+..|.++||+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~ 84 (397)
T 3fsl_A 5 VDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLF 84 (397)
T ss_dssp CCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred CCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHh
Confidence 667889999999999999999999999999999999988888999999888 7755467899999999999999999997
Q ss_pred CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
+.....++++++ +++.|.|||+|+.+++.++..+.| ||+|++++|+|++|...++.+|+
T Consensus 85 ~~~~~~~~~~~~--------------------~i~~t~g~~~a~~~~~~~~~~~~~-gd~vl~~~p~~~~~~~~~~~~g~ 143 (397)
T 3fsl_A 85 GADHPVLKQQRV--------------------ATIQTLGGSGALKVGADFLKRYFP-ESGVWVSDPTWENHVAIFAGAGF 143 (397)
T ss_dssp CTTCHHHHTTCE--------------------EEEEESHHHHHHHHHHHHHHHHCT-TCCEEEESSCCHHHHHHHHHTTC
T ss_pred cCCcccccccce--------------------EEEEcCCcHHHHHHHHHHHHhcCC-CCeEEEeCCCchhHHHHHHHcCC
Confidence 765433345521 126799999999999766655678 99999999999999999988876
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 144 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 223 (397)
T 3fsl_A 144 EVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGME 223 (397)
T ss_dssp CEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTT
T ss_pred ceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcc
Confidence 4
Q ss_pred -----------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChh
Q psy16707 299 -----------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPK 325 (420)
Q Consensus 299 -----------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~ 325 (420)
....+..++++|..++.+++.+|.+++
T Consensus 224 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 303 (397)
T 3fsl_A 224 EDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEA 303 (397)
T ss_dssp GGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHH
T ss_pred cccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHH
Confidence 001135678889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCC
Q psy16707 326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTS 405 (420)
Q Consensus 326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~ 405 (420)
+..+|.++++.++++++++|+.+.+.|++.+.+..|....++.|+|.|++++.+++..+++++||++.|++|||++.+++
T Consensus 304 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~Ris~~~~~~ 383 (397)
T 3fsl_A 304 LKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNT 383 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTCEEEGGGCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEEecCH
Confidence 99889999999999999999999999999854334787888999999999999999888899999999999999999899
Q ss_pred CCHHHHHHHHHHHh
Q psy16707 406 KNVGYLAKAIHAVT 419 (420)
Q Consensus 406 ~ni~~la~AI~~vv 419 (420)
++|+++.++|++++
T Consensus 384 ~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 384 ANVQRVAKAFAAVM 397 (397)
T ss_dssp TTHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHhhC
Confidence 99999999999874
No 8
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.97 E-value=1e-30 Score=269.06 Aligned_cols=125 Identities=36% Similarity=0.661 Sum_probs=120.7
Q ss_pred chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
+..|++.++|++||+||.||+++|+.+|+||+|+++|++|++.|++|++.||..|++.|++++++++|+||++|.|||+|
T Consensus 290 ~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~ 369 (420)
T 4h51_A 290 VKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSF 369 (420)
T ss_dssp HHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEE
T ss_pred HHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEe
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhhC
Q psy16707 83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v~ 128 (420)
+|||++||+.|+ +||||++++||||+||||++||+|+|+||++|-
T Consensus 370 ~gls~e~v~~L~-e~~Vy~~~~gRis~Agl~~~ni~~~a~aI~~vv 414 (420)
T 4h51_A 370 LGLSKAQCEYCQ-NHNIFITVSGRANMAGLTHETALMLAQTINDAV 414 (420)
T ss_dssp CCCCHHHHHHHH-HTTEECCTTCEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred cCcCHHHHHHHH-hCCEEEcCCCEEEeccCCHHHHHHHHHHHHHHH
Confidence 999999999985 789999999999999999999999999999983
No 9
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.93 E-value=1.1e-24 Score=218.71 Aligned_cols=264 Identities=39% Similarity=0.748 Sum_probs=213.3
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHH-HHccCCCCCCCCCCCCHHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEI-VLNKNLDKEYAPIIGAPDFGKLA 212 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~-~~~~~~~~~Y~p~~G~~~fr~a~ 212 (420)
+.++ +..+++|+++.+.+.++++.++++|||++|.|.|.++.+++++.|++|... .......+.|.|..|.+++|+++
T Consensus 4 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~i 82 (412)
T 1yaa_A 4 LFNN-IELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNA 82 (412)
T ss_dssp TTTT-CCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred hhcc-CcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHH
Confidence 3455 788889999999999998888899999999999999988899999999888 76533467899999999999999
Q ss_pred HHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 213 AQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 213 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
++++.+..+..+++++|+. +||.|||+|+.+++.++..+.| ||+|++++|+|+.|...+
T Consensus 83 a~~~~~~~~~~~~~~~i~~--------------------~~t~g~~~a~~~~~~~~~~~~~-gd~Vl~~~p~~~~~~~~~ 141 (412)
T 1yaa_A 83 AKIIFGTQSDALQEDRVIS--------------------VQSLSGTGALHISAKFFSKFFP-DKLVYLSKPTWANHMAIF 141 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHCT-TCCEEEEESCCTTHHHHH
T ss_pred HHHHhcCCCCCCCcceEEE--------------------EeccchHhHHHHHHHHHHHhCC-CCEEEEeCCCCccHHHHH
Confidence 9999775544445666654 5699999999998665555668 999999999999999888
Q ss_pred hhcCcc--------------------------------------------------------------------------
Q psy16707 293 KHTGLE-------------------------------------------------------------------------- 298 (420)
Q Consensus 293 ~~aG~~-------------------------------------------------------------------------- 298 (420)
+..|++
T Consensus 142 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 221 (412)
T 1yaa_A 142 ENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGF 221 (412)
T ss_dssp HTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred HHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 877653
Q ss_pred ---------------------------------------------h--h------------h-------hhhccCCCchH
Q psy16707 299 ---------------------------------------------K--I------------L-------IRAFYSSPPIH 312 (420)
Q Consensus 299 ---------------------------------------------~--~------------~-------~r~~~s~pp~~ 312 (420)
. . + .+..++++|..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 301 (412)
T 1yaa_A 222 ATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAY 301 (412)
T ss_dssp SSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHH
T ss_pred cCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChH
Confidence 0 0 0 00112233444
Q ss_pred HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEE
Q psy16707 313 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYL 392 (420)
Q Consensus 313 ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~ 392 (420)
++.++...|++.++..+|.++++.++++++++|+.+.+.|++.+.++.|..+.++.|+|.|.+++.+++..+++++||++
T Consensus 302 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v 381 (412)
T 1yaa_A 302 GAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYL 381 (412)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCHHHHHHHHHhCCEEe
Confidence 55555555655555555778899999999999999999999987544477778899999999999888888989999999
Q ss_pred eCCCcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 393 TKDGRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 393 ~p~gRis~agl~~~ni~~la~AI~~vv 419 (420)
.|..|||++.++.++++++.+++.+++
T Consensus 382 ~~~~Ris~~~~~~~~i~~~~~~l~~~~ 408 (412)
T 1yaa_A 382 VASGRASIAGLNQGNVEYVAKAIDEVV 408 (412)
T ss_dssp CTTSEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred ccCcEEEEccCCHhHHHHHHHHHHHHH
Confidence 999999999889999999999999875
No 10
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.93 E-value=6.8e-25 Score=218.05 Aligned_cols=260 Identities=38% Similarity=0.637 Sum_probs=201.7
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+..+++++++.+...++++.+++.|||++|.|.|+++.+++++.|++|......+...+.|.|..|.++||+++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~ 84 (396)
T 2q7w_A 5 ITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFG 84 (396)
T ss_dssp CCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred cccCCCchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhc
Confidence 56788899999998888877788999999999999998888899999888765433567899999999999999999966
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.....+++++|.. ++|.|||+|+.+++.++..+.| ||.|++++|+|+.|...++..|++
T Consensus 85 ~~~~~~~~~~v~~--------------------~~~~g~~~a~~~~~~~~~~~~~-gd~Vl~~~p~y~~~~~~~~~~g~~ 143 (396)
T 2q7w_A 85 KGSALINDKRART--------------------AQTPGGTGALRVAADFLAKNTS-VKRVWVSNPSWPNHKSVFNSAGLE 143 (396)
T ss_dssp TTCHHHHTTCEEE--------------------EEESHHHHHHHHHHHHHHHHSC-CCEEEEEESCCTHHHHHHHHTTCE
T ss_pred CCCCccccccEEE--------------------EecccchhhHHHHHHHHHHhCC-CCEEEEcCCCchhHHHHHHHcCCc
Confidence 5443344566643 3599999999999876655668 999999999999999988877663
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 144 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~ 223 (396)
T 2q7w_A 144 VREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEE 223 (396)
T ss_dssp EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHH
T ss_pred eEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccc
Confidence
Q ss_pred ------------------------------------h---------hhh-------hhccCCCchHHHHHHHHHhCChhh
Q psy16707 299 ------------------------------------K---------ILI-------RAFYSSPPIHGARIVQEILGDPKL 326 (420)
Q Consensus 299 ------------------------------------~---------~~~-------r~~~s~pp~~ga~iv~~IL~dp~L 326 (420)
. .+. +..+++++..++.++...|++.++
T Consensus 224 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l 303 (396)
T 2q7w_A 224 DAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL 303 (396)
T ss_dssp HTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHH
T ss_pred hhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhh
Confidence 1 011 245667788888888888988778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK 406 (420)
Q Consensus 327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~ 406 (420)
+..|.+.++.++++++++|+.+.+.|++.|.++.|....++.|+|.|.+++.+++..+++++||++.|+.|||++..+.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~Ris~~~~~~e 383 (396)
T 2q7w_A 304 RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPD 383 (396)
T ss_dssp HHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCCHHHHHHHHHhcCeeecCCceEEEeecCHH
Confidence 78888899999999999999999999998754447767788999999999888888888999999999999999988999
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
+++++.++|.+++
T Consensus 384 ~i~~~~~~l~~~l 396 (396)
T 2q7w_A 384 NMAPLCEAIVAVL 396 (396)
T ss_dssp THHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999874
No 11
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.93 E-value=3.6e-24 Score=214.64 Aligned_cols=264 Identities=42% Similarity=0.772 Sum_probs=217.7
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCCCCHHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPIIGAPDFGKLA 212 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~fr~a~ 212 (420)
+.++ +..+++++++.+.+.++++.++++|||++|.|.|+++.+++++.|++|......+ ...+.|.|..|.++||+++
T Consensus 5 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 5 VFAE-VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp TTTT-CCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred hhhh-CcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence 3444 7788899999999999988788999999999999998888889999998887632 2467899999999999999
Q ss_pred HHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC-----CEEEEcCCCCCC
Q psy16707 213 AQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-----KVIYVPTPTWGN 287 (420)
Q Consensus 213 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-----d~VlvpdP~w~n 287 (420)
++++.+..+..+.+++|.. ++|.|||+|+.+++.++..+.| | |.|++++|+|+.
T Consensus 84 a~~~~~~~~~~~~~~~v~~--------------------~~t~gg~~a~~~~~~~~~~~~~-g~~~~~d~Vl~~~p~y~~ 142 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGG--------------------VQSLGGTGALRIGAEFLARWYN-GTNNKDTPVYVSSPTWEN 142 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHSS-SSSCCCSCEEEEESCCTH
T ss_pred HHHHhcCCCCccCCCcEEE--------------------EECCCcHHHHHHHHHHHHHhCc-CcCCCCCeEEEcCCCcHH
Confidence 9999776544445666654 5699999999999765555667 8 999999999999
Q ss_pred cHHHHhhcCcc---------------------------------------------------------------------
Q psy16707 288 HIPICKHTGLE--------------------------------------------------------------------- 298 (420)
Q Consensus 288 y~~i~~~aG~~--------------------------------------------------------------------- 298 (420)
|...++..|++
T Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 222 (412)
T 1ajs_A 143 HNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFD 222 (412)
T ss_dssp HHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 99887765531
Q ss_pred -------------------------------------------------h---h------h-------hhhccCCCchHH
Q psy16707 299 -------------------------------------------------K---I------L-------IRAFYSSPPIHG 313 (420)
Q Consensus 299 -------------------------------------------------~---~------~-------~r~~~s~pp~~g 313 (420)
. . + .+..+++++..+
T Consensus 223 e~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (412)
T 1ajs_A 223 SAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQG 302 (412)
T ss_dssp ESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHH
T ss_pred cccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHH
Confidence 1 0 1 223466667777
Q ss_pred HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEe
Q psy16707 314 ARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLT 393 (420)
Q Consensus 314 a~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~ 393 (420)
+.++...|.+.++..+|.++++.++++++++|+.+.+.|++++.|..|..+.++.|+|.|.+++.+++..+++++||++.
T Consensus 303 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~ 382 (412)
T 1ajs_A 303 ARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLL 382 (412)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCCHHHHHHHHHhCCEEec
Confidence 87777778776556668888999999999999999999999876655777778899999999988888888899999999
Q ss_pred CCCcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 394 KDGRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 394 p~gRis~agl~~~ni~~la~AI~~vv 419 (420)
|++|||++.++.++++++.+++.+++
T Consensus 383 ~~~Ris~~~~~~~~i~~~~~~l~~~l 408 (412)
T 1ajs_A 383 PSGRINMCGLTTKNLDYVATSIHEAV 408 (412)
T ss_dssp TTSEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CCcEEEeeeCCHHHHHHHHHHHHHHH
Confidence 99999999889999999999998875
No 12
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.93 E-value=2.1e-24 Score=214.71 Aligned_cols=256 Identities=31% Similarity=0.593 Sum_probs=214.8
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+..+++++++.+.+.++++.++++|||++|.|.|+++.+++++.|++|...+..+...+.|.+..|.++||+++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~ 84 (394)
T 2ay1_A 5 LKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILG 84 (394)
T ss_dssp CCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHG
T ss_pred CccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhC
Confidence 67888999999999999888889999999999999998888999999988775433567899999999999999999866
Q ss_pred CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.+ +++++|+. ++|.|||+|+.+++..+..+.| ||.|++++|+|+.|...++..|++
T Consensus 85 ~~---~~~~~v~~--------------------~~~~g~~~a~~~~~~~~~~~~~-gd~vl~~~p~~~~~~~~~~~~g~~ 140 (394)
T 2ay1_A 85 DG---LKSETTAT--------------------LATVGGTGALRQALELARMANP-DLRVFVSDPTWPNHVSIMNFMGLP 140 (394)
T ss_dssp GG---CCGGGEEE--------------------EEEEHHHHHHHHHHHHHHHHCT-TCCEEEEESCCHHHHHHHHHHTCC
T ss_pred CC---CCcccEEE--------------------EecCCchhHHHHHHHHHHhcCC-CCEEEEcCCCChhHHHHHHHcCCc
Confidence 42 13556643 4699999999999877665667 899999999999999888877653
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 141 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 220 (394)
T 2ay1_A 141 VQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEE 220 (394)
T ss_dssp EEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHH
T ss_pred eEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCccc
Confidence
Q ss_pred ------------------------------------h--h--------------hhhhccCCCchHHHHHHHHHhCChhh
Q psy16707 299 ------------------------------------K--I--------------LIRAFYSSPPIHGARIVQEILGDPKL 326 (420)
Q Consensus 299 ------------------------------------~--~--------------~~r~~~s~pp~~ga~iv~~IL~dp~L 326 (420)
. . ..+..+++++..++.++...|.+.++
T Consensus 221 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l 300 (394)
T 2ay1_A 221 DAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPEL 300 (394)
T ss_dssp HHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHH
T ss_pred chHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHH
Confidence 1 0 11245666677788888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK 406 (420)
Q Consensus 327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~ 406 (420)
+..|.+.++.++++++++|+.+.+.|++.|.++.|....++.|+|.|..++.+++..+++++||++.|+.|||++.++++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~ 380 (394)
T 2ay1_A 301 RADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDN 380 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCHHHHHHHHHhCCEEecCCCeEEeecCCHh
Confidence 77888889999999999999999999988754447767778899999999888888888999999999999999988999
Q ss_pred CHHHHHHHHHHH
Q psy16707 407 NVGYLAKAIHAV 418 (420)
Q Consensus 407 ni~~la~AI~~v 418 (420)
+++++.++|+++
T Consensus 381 ~i~~~~~~l~~~ 392 (394)
T 2ay1_A 381 TIPILARAIIEV 392 (394)
T ss_dssp THHHHHHHHHHH
T ss_pred hHHHHHHHHHHc
Confidence 999999999886
No 13
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.91 E-value=9.5e-24 Score=212.26 Aligned_cols=253 Identities=22% Similarity=0.248 Sum_probs=203.0
Q ss_pred hhhhccccCCChHHHHHHHHHccCCC----CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707 135 QDARTSSVKVPSSNLLTEAFKKDTNV----NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK 210 (420)
Q Consensus 135 ~~~~~~~~~~d~i~~l~~~~~~d~~~----~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~ 210 (420)
+.+ .....+|++|.+.+.++++... ++|||++|.|.|+++.+++++.|++|...+.. ...+.|.|..|.++||+
T Consensus 10 ~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~y~~~~g~~~lr~ 87 (418)
T 3rq1_A 10 KHA-KGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSD-SEHVGYAPIAGIPDFLC 87 (418)
T ss_dssp TTT-TTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCH-HHHHSCCCTTCCHHHHH
T ss_pred hhc-CCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcc-cccCCCCCCCChHHHHH
Confidence 444 5677789999999998877754 89999999999999999999999998766532 23568999999999999
Q ss_pred HHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 211 LAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 211 a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
++++++.+.+++.. +.. ++.|.|||+|+.+++..+ +.| ||+|++++|+|++|..
T Consensus 88 ~ia~~~~~~~~~~~-~~~----------------------i~~t~g~~~al~~~~~~l--~~~-gd~Vl~~~p~~~~~~~ 141 (418)
T 3rq1_A 88 AAEKECFGNFRPEG-HIR----------------------SIATAGGTGGIHHLIHNY--TEP-GDEVLTADWYWGAYRV 141 (418)
T ss_dssp HHHHHHHGGGCCSS-EEE----------------------EEEESHHHHHHHHHHHHH--SCT-TCEEEEESSCCTHHHH
T ss_pred HHHHHHhcccCccc-ccc----------------------EEECCchHHHHHHHHHHh--cCC-CCEEEECCCCchhHHH
Confidence 99999977553321 112 378999999999998755 557 9999999999999998
Q ss_pred HHhhcCcc------------------------------------------------------------h-----------
Q psy16707 291 ICKHTGLE------------------------------------------------------------K----------- 299 (420)
Q Consensus 291 i~~~aG~~------------------------------------------------------------~----------- 299 (420)
+++.+|++ .
T Consensus 142 ~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~ 221 (418)
T 3rq1_A 142 ICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVI 221 (418)
T ss_dssp HHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEE
T ss_pred HHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeE
Confidence 87776654 0
Q ss_pred -----------------------------------------------------------------------hhhhhccCC
Q psy16707 300 -----------------------------------------------------------------------ILIRAFYSS 308 (420)
Q Consensus 300 -----------------------------------------------------------------------~~~r~~~s~ 308 (420)
...+..|++
T Consensus 222 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (418)
T 3rq1_A 222 IGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSN 301 (418)
T ss_dssp EEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSS
T ss_pred EEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCC
Confidence 001122345
Q ss_pred CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-CHHHHHHHHHh
Q psy16707 309 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVEKLIKE 387 (420)
Q Consensus 309 pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~~~~v~~Ll~e 387 (420)
++..++.++..+|.++++.+.|.++++.++++++++|+.+.+.|+++| |..+.++.|+|.|..+ +.+.+..++++
T Consensus 302 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 377 (418)
T 3rq1_A 302 ICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG----LPMLPYRGGFFITIPTDSANAICEELKK 377 (418)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----CCCCCCCSSSEEEEECTTHHHHHHHHHH
T ss_pred CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCceEEEEcCCCCHHHHHHHHHh
Confidence 666777777777888777778999999999999999999999999987 6778889999999755 44445445689
Q ss_pred CCeEEeCCC---cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 388 HSVYLTKDG---RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 388 ~~Vy~~p~g---Ris~agl~~~ni~~la~AI~~vv 419 (420)
+||++.|++ |||++++++++++++.++|.+++
T Consensus 378 ~gi~v~~g~~~iRis~~~~~~~~i~~~~~~l~~~l 412 (418)
T 3rq1_A 378 EHIYVIALANGIRIAACGIPKCQMTGLAEKIYNAM 412 (418)
T ss_dssp TTEECEECSSEEEEEGGGSCHHHHTTHHHHHHHHH
T ss_pred CCEEEecCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999986 99999889999999999998875
No 14
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.90 E-value=3.5e-23 Score=210.10 Aligned_cols=244 Identities=18% Similarity=0.169 Sum_probs=182.6
Q ss_pred ccccCCChHHHHHHHHHccCCCCc--eeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNK--INLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~k--InL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
....+.|||+.+.+.+++++++++ |||++|. .+++|.+++++.|++|......+...+.|.|..|.++||+++++++
T Consensus 31 ~~~~~~~~i~~~~~~~~~~~~~~~~~i~l~~g~-~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~ 109 (427)
T 3dyd_A 31 MAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGD-PTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYY 109 (427)
T ss_dssp ----------------CCCCCTTSCCEECCCSC-TTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHH
T ss_pred HhhcccchHHHHHHHHhhcccCCCCEEeCCCcC-CCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHH
Confidence 455568899999999999987766 9999998 4556778999999999888776545679999999999999999998
Q ss_pred cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707 217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG 296 (420)
Q Consensus 217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG 296 (420)
.+. +..+.+++| +.|.|||+|+.+++.++ +.| ||+|++++|+|++|..+++.+|
T Consensus 110 ~~~-~~~~~~~~v----------------------~~t~g~t~al~~~~~~l--~~~-gd~vl~~~p~~~~~~~~~~~~g 163 (427)
T 3dyd_A 110 HCP-EAPLEAKDV----------------------ILTSGCSQAIDLCLAVL--ANP-GQNILVPRPGFSLYKTLAESMG 163 (427)
T ss_dssp CBT-TBCCCGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHHHHHTT
T ss_pred hhc-CCCCChHHE----------------------EEecCcHHHHHHHHHHh--cCC-CCEEEEcCCCchhHHHHHHHcC
Confidence 765 333445545 67999999999999876 347 9999999999999999999988
Q ss_pred cc------------------------------------------------------------------------------
Q psy16707 297 LE------------------------------------------------------------------------------ 298 (420)
Q Consensus 297 ~~------------------------------------------------------------------------------ 298 (420)
++
T Consensus 164 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~ 243 (427)
T 3dyd_A 164 IEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKY 243 (427)
T ss_dssp CEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCC
T ss_pred CEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcC
Confidence 75
Q ss_pred ----------------------------------h--------hhh------hhccCCCchHHHHHHHHHhCChhhHHHH
Q psy16707 299 ----------------------------------K--------ILI------RAFYSSPPIHGARIVQEILGDPKLKAQW 330 (420)
Q Consensus 299 ----------------------------------~--------~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~w 330 (420)
. .+. .....+++.+++.++..+|++. ..+
T Consensus 244 ~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~--~~~- 320 (427)
T 3dyd_A 244 EPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRT--PGE- 320 (427)
T ss_dssp CCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHS--CHH-
T ss_pred ccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhc--CHH-
Confidence 1 111 1124677888998888877531 133
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC---
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG--- 396 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g--- 396 (420)
.++.++++++++|+.+.+.|+++ | |.++.++.|||.|+.++ .+++++|++++||++.|+.
T Consensus 321 --~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~ 394 (427)
T 3dyd_A 321 --FYHNTLSFLKSNADLCYGALAAIPG----LRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE 394 (427)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHSTT----EEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCC----ceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC
Confidence 35566799999999999999987 4 77788899999996543 4677899889999999863
Q ss_pred -----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 397 -----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 -----Ris~agl~~~ni~~la~AI~~vv 419 (420)
|||++ .++++|++.+++|.+++
T Consensus 395 ~~~~iRis~~-~~~e~i~~~l~~l~~~l 421 (427)
T 3dyd_A 395 YPNFIRVVIT-VPEVMMLEACSRIQEFC 421 (427)
T ss_dssp CTTEEEEESC-SCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEC-CCHHHHHHHHHHHHHHH
Confidence 99997 89999999999998875
No 15
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.88 E-value=5.7e-22 Score=198.98 Aligned_cols=251 Identities=18% Similarity=0.236 Sum_probs=188.0
Q ss_pred cchhhhccccCCChHHHHHHHHHccCC----CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHH
Q psy16707 133 RFQDARTSSVKVPSSNLLTEAFKKDTN----VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDF 208 (420)
Q Consensus 133 ~~~~~~~~~~~~d~i~~l~~~~~~d~~----~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~f 208 (420)
.++.+ .....+|+++.+.+.++++.. .++|||++|.|.|.++.+++++.|++|...+.. ...+.|.|..|.++|
T Consensus 7 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~Y~~~~g~~~l 84 (413)
T 3t18_A 7 TIKRA-TWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDR-SHIASYAPIEGEKDY 84 (413)
T ss_dssp SCTTT-CCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCH-HHHHSCCCTTCCHHH
T ss_pred hhhhc-ccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCc-ccccCcCCCCCCHHH
Confidence 35555 788899999999998877664 489999999999999999999999999877532 245789999999999
Q ss_pred HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
|+++++++.+...+. .++.| +.|.||++|+.+++..+ +.| ||+|++++|+|++|
T Consensus 85 r~~la~~~~~~~~~~-~~~~i----------------------~~t~g~~~al~~~~~~~--~~~-gd~Vl~~~p~~~~~ 138 (413)
T 3t18_A 85 RKIVIDTLFGPYKPE-GYISA----------------------IATPGGTGAIRSAIFSY--LDE-GDPLICHDYYWAPY 138 (413)
T ss_dssp HHHHHHHHHGGGCCS-SEEEE----------------------EEESHHHHHHHHHHHHH--CCS-SCEEEEESSCCTHH
T ss_pred HHHHHHHHhcccCcc-ccCcE----------------------EEcCccHHHHHHHHHHh--cCC-CCEEEECCCCcccH
Confidence 999999997765332 22233 77999999999998755 457 99999999999999
Q ss_pred HHHHhhcCcc--------------------------------------------------------hhh-----------
Q psy16707 289 IPICKHTGLE--------------------------------------------------------KIL----------- 301 (420)
Q Consensus 289 ~~i~~~aG~~--------------------------------------------------------~~~----------- 301 (420)
...++.+|++ ..+
T Consensus 139 ~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~ 218 (413)
T 3t18_A 139 RKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKK 218 (413)
T ss_dssp HHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCE
T ss_pred HHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCc
Confidence 8777766553 000
Q ss_pred ---------------------------------------------------------------------------hhhcc
Q psy16707 302 ---------------------------------------------------------------------------IRAFY 306 (420)
Q Consensus 302 ---------------------------------------------------------------------------~r~~~ 306 (420)
.++.|
T Consensus 219 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (413)
T 3t18_A 219 ITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNW 298 (413)
T ss_dssp EEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccc
Confidence 01112
Q ss_pred CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-CHHHHHHHH
Q psy16707 307 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVEKLI 385 (420)
Q Consensus 307 s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~~~~v~~Ll 385 (420)
++++..++.++..+|.+..+.+ |.++++.++++++++|+.+.+.|++.| |....++.|+|.|..+ +.+++...+
T Consensus 299 ~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l 373 (413)
T 3t18_A 299 SNGTHAAQNILIELERAENKKI-YEQELVDLRNMLKSRADVFVTAAKENK----LTMIPYFGGFFTFIPTDKAFDIVKDL 373 (413)
T ss_dssp SSCCHHHHHHHHHTTSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCSSSCEEEECSCHHHHHHHH
T ss_pred cCCChHHHHHHHHHhcChHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcC----CCccCCCceEEEEeCCCCHHHHHHHH
Confidence 3344445554444455443333 888899999999999999999999987 6778889999999754 455544445
Q ss_pred HhCCeEEeCCC---cEEEcccCCCCH-HHHHHHHH
Q psy16707 386 KEHSVYLTKDG---RISMAGVTSKNV-GYLAKAIH 416 (420)
Q Consensus 386 ~e~~Vy~~p~g---Ris~agl~~~ni-~~la~AI~ 416 (420)
+++||++.|++ |||++..+++++ +.|.++++
T Consensus 374 ~~~gv~v~~g~~~iRis~~~~~~~~~l~~l~~~l~ 408 (413)
T 3t18_A 374 EKENIFTIPSAKGIRVAICGVGEEKIPKLVQRLAF 408 (413)
T ss_dssp HHTTEECEECSSEEEECTTTSCGGGHHHHHHHHHH
T ss_pred HhCCEEEecCCCceEEEEeeCCHHHHHHHHHHHHH
Confidence 89999999976 999997777765 33344443
No 16
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.83 E-value=1.5e-19 Score=188.41 Aligned_cols=268 Identities=13% Similarity=0.145 Sum_probs=204.8
Q ss_pred HHHHHHHHHhh-----CCCccc----chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHH
Q psy16707 117 VGYLAKAIHAN-----GSLPIR----FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQAD 187 (420)
Q Consensus 117 i~~va~ai~~v-----~~~p~~----~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~ 187 (420)
|-..|+.+.+- |.+|.. ..-.....+..+|+..+.+.+..+..+++||++.| +.+++.++++++.
T Consensus 43 ~~~~a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~------~~~~p~~~~~~a~ 116 (500)
T 3tcm_A 43 IVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEI------KTLFSADSISRAK 116 (500)
T ss_dssp HHHHHHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTH------HHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCC------cccCCHHHHHHHH
Confidence 44456666665 776632 11111123556788888888888889999999998 4567888888887
Q ss_pred HHHHccC--CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHH
Q psy16707 188 EIVLNKN--LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGA 265 (420)
Q Consensus 188 ~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~ 265 (420)
+.+.... ....|.+..|.++||+++++++...++..++++.| +.|.||++++.+++
T Consensus 117 ~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i----------------------~~t~G~~~al~~~~ 174 (500)
T 3tcm_A 117 QILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDI----------------------FLTDGASPGVHLMM 174 (500)
T ss_dssp HHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGE----------------------EEESSSHHHHHHHH
T ss_pred HHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccE----------------------EEcCCHHHHHHHHH
Confidence 7665432 56799999999999999999985333222345555 67999999999998
Q ss_pred HHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-----------------------------------------------
Q psy16707 266 AFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------------------------------------------- 298 (420)
Q Consensus 266 ~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------------------------------------------- 298 (420)
..+. ..| ||.|++++|+|++|...++.+|++
T Consensus 175 ~~l~-~~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~ 252 (500)
T 3tcm_A 175 QLLI-RNE-KDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQ 252 (500)
T ss_dssp HHHC-CST-TEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCC
T ss_pred HHHc-CCC-CCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcc
Confidence 7652 147 999999999999999999888774
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 253 ~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~ 332 (500)
T 3tcm_A 253 VLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEI 332 (500)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEE
Confidence
Q ss_pred ----------hhhhhhccCCCchHHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcc
Q psy16707 299 ----------KILIRAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNH 363 (420)
Q Consensus 299 ----------~~~~r~~~s~pp~~ga~iv~~IL~dp----~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~ 363 (420)
....++..++++..++.++..+|++| .+..+|.++++.++++++++|+.+.+.|+++ | |.+
T Consensus 333 ~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g----~~~ 408 (500)
T 3tcm_A 333 TGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEG----ITC 408 (500)
T ss_dssp ESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT----EEC
T ss_pred eCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----cEE
Confidence 00012345677888999888888754 3666799999999999999999999999987 4 778
Q ss_pred cCCCCceEEec--CCCHH---------------HHHHHHHhCCeEEeCC-------C----cEEEcccCCCCHHHHHHHH
Q psy16707 364 ITDQIGMFCYT--GLNAT---------------QVEKLIKEHSVYLTKD-------G----RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 364 i~~q~GmF~~~--~l~~~---------------~v~~Ll~e~~Vy~~p~-------g----Ris~agl~~~ni~~la~AI 415 (420)
..+++|||.|. .+++. ++.++++++||++.|+ | |||++ .+.++++++.++|
T Consensus 409 ~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l 487 (500)
T 3tcm_A 409 NEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRF 487 (500)
T ss_dssp CCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHH
T ss_pred ecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHH
Confidence 89999999994 44332 2568889999999974 2 99999 9999999999999
Q ss_pred HHHh
Q psy16707 416 HAVT 419 (420)
Q Consensus 416 ~~vv 419 (420)
.+++
T Consensus 488 ~~~~ 491 (500)
T 3tcm_A 488 TVFH 491 (500)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 17
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.78 E-value=1.9e-17 Score=167.97 Aligned_cols=246 Identities=13% Similarity=0.139 Sum_probs=178.9
Q ss_pred cccchhhhccccCCChHH-HH---HHHHHc-cCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCCCCCCC
Q psy16707 131 PIRFQDARTSSVKVPSSN-LL---TEAFKK-DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLDKEYAP 201 (420)
Q Consensus 131 p~~~~~~~~~~~~~d~i~-~l---~~~~~~-d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~~~Y~p 201 (420)
+..+++. +..+++...| .+ ...+.. .++.++|||++|. + ..+.++.|.+|......+ ...+.|.|
T Consensus 36 ~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~--~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~ 109 (449)
T 3qgu_A 36 DVQRNEN-FGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGD---T--TEPLPKYIADAMAKAAAGLATREGYSGYGA 109 (449)
T ss_dssp CCCCCHH-HHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCC---C--CCCCCHHHHHHHHHHHHGGGGSCCCCCSTT
T ss_pred chhhhHH-HHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCC---C--CCCCCHHHHHHHHHHHHhhccccCCCCCCC
Confidence 3344444 5555654333 33 333332 4567899999994 3 345677777776665542 35679999
Q ss_pred CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEc
Q psy16707 202 IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVP 281 (420)
Q Consensus 202 ~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvp 281 (420)
..|.++|++++++++. .+..++++.| +.|.|+++++.++.. + +.| ||.|+++
T Consensus 110 ~~g~~~lr~~ia~~~~--~g~~~~~~~i----------------------~~t~G~~~al~~~~~-l--~~~-gd~Vl~~ 161 (449)
T 3qgu_A 110 EQGQGALREAVASTFY--GHAGRAADEI----------------------FISDGSKCDIARIQM-M--FGS-KPTVAVQ 161 (449)
T ss_dssp TTCCHHHHHHHHHHHH--TTTTCCGGGE----------------------EEESCHHHHHHHHHH-H--HCS-SSCEEEE
T ss_pred CCCcHHHHHHHHHHHH--cCCCCCHHHE----------------------EEccCHHHHHHHHHH-H--hCC-CCEEEEc
Confidence 9999999999999986 2222344545 669999999998843 3 347 9999999
Q ss_pred CCCCCCcHHHHhhcCc------------c---------------------------------------------------
Q psy16707 282 TPTWGNHIPICKHTGL------------E--------------------------------------------------- 298 (420)
Q Consensus 282 dP~w~ny~~i~~~aG~------------~--------------------------------------------------- 298 (420)
+|+|++|...++.+|+ .
T Consensus 162 ~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~ 241 (449)
T 3qgu_A 162 DPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKN 241 (449)
T ss_dssp ESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC
Confidence 9999999999887762 1
Q ss_pred --------------------------------------------------------hhh---------------hhhccC
Q psy16707 299 --------------------------------------------------------KIL---------------IRAFYS 307 (420)
Q Consensus 299 --------------------------------------------------------~~~---------------~r~~~s 307 (420)
..+ ....++
T Consensus 242 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (449)
T 3qgu_A 242 GSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFN 321 (449)
T ss_dssp TCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCC
T ss_pred CcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccC
Confidence 111 123456
Q ss_pred CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHH
Q psy16707 308 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEK 383 (420)
Q Consensus 308 ~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~ 383 (420)
+++..++.++..+|.+. ..++++.++++++++|+.|.+.|++.| |....++.|+|.|+.++ .++++.
T Consensus 322 ~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (449)
T 3qgu_A 322 GASNIVQAGGLACLQPE-----GLKEMNAMIKFYKENAQILKTTFTEMG----FSVYGGDDAPYIWVGFPGKPSWDVFAE 392 (449)
T ss_dssp CCCHHHHHHHHHHTSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHTT----CCEEESSSSSEEEEECTTSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhc-----CHHHHHHHHHHHHHHHHHHHHHHHHCC----CeeeCCCCeeEEEEECCCCCHHHHHHH
Confidence 78888888777767642 225677788999999999999999987 77777888999997653 456788
Q ss_pred HHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 384 LIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 384 Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
|++++||++.|+ + |||+++ +.++|+++.++|.++++
T Consensus 393 l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 393 ILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEAYG 438 (449)
T ss_dssp HHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHC
T ss_pred HHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 988999999875 2 999875 88999999999998764
No 18
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.77 E-value=1.8e-17 Score=165.17 Aligned_cols=245 Identities=17% Similarity=0.193 Sum_probs=177.0
Q ss_pred chhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
++++ +..++.++++.+...+++. ..++.|||+.|. ++ +++++.|.++......+ ....|.+..|.++||++
T Consensus 4 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~ 76 (385)
T 1b5p_A 4 LSRR-VQAMKPSATVAVNAKALELRRQGVDLVALTAGE---PD--FDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREA 76 (385)
T ss_dssp CCHH-HHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHH
T ss_pred hhhH-HhhcCcchHHHHHHHHHHHHhcCCCEEEecCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHH
Confidence 4455 7778889998888776554 246789999996 33 34567777776665543 34689999999999999
Q ss_pred HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+++++....+..+++++| +.|.|||+|+.+++..+ +.| ||.|++++|+|+.|...
T Consensus 77 ia~~~~~~~g~~~~~~~i----------------------~~t~g~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~ 131 (385)
T 1b5p_A 77 LAEKFRRENGLSVTPEET----------------------IVTVGGSQALFNLFQAI--LDP-GDEVIVLSPYWVSYPEM 131 (385)
T ss_dssp HHHHHHHTTCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHH
T ss_pred HHHHHHHHhCCCCChHHE----------------------EEcCChHHHHHHHHHHh--cCC-CCEEEEcCCCchhHHHH
Confidence 999994333222345555 67999999999998755 457 99999999999999999
Q ss_pred HhhcCcc-------------------------------------------------------------------------
Q psy16707 292 CKHTGLE------------------------------------------------------------------------- 298 (420)
Q Consensus 292 ~~~aG~~------------------------------------------------------------------------- 298 (420)
++..|++
T Consensus 132 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 211 (385)
T 1b5p_A 132 VRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY 211 (385)
T ss_dssp HHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS
T ss_pred HHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhccc
Confidence 8877764
Q ss_pred ---------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707 299 ---------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTE 333 (420)
Q Consensus 299 ---------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e 333 (420)
.........+++..++.++...|.+++.. .++
T Consensus 212 ~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~---~~~ 288 (385)
T 1b5p_A 212 EGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEAS---RAF 288 (385)
T ss_dssp SSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHH---HHH
T ss_pred CCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcc---hHH
Confidence 01111223456667777666656432111 244
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CHH-HHHHHHHhCCeEEeCC------C--cEE
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NAT-QVEKLIKEHSVYLTKD------G--RIS 399 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~~-~v~~Ll~e~~Vy~~p~------g--Ris 399 (420)
++.++++++++|+.+.+.|+++| |....++.|+|.|..+ +.+ +++.|+ ++||++.|+ + |||
T Consensus 289 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis 363 (385)
T 1b5p_A 289 VEMAREAYRRRRDLLLEGLTALG----LKAVRPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLS 363 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEE
Confidence 67778999999999999999886 6667788899988543 444 557776 999999885 2 999
Q ss_pred EcccCCCCHHHHHHHHHHHh
Q psy16707 400 MAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 400 ~agl~~~ni~~la~AI~~vv 419 (420)
++ .+.++++...++|.+++
T Consensus 364 ~~-~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 364 YA-TSEENLRKALERFARVL 382 (385)
T ss_dssp CC-SCHHHHHHHHHHGGGGC
T ss_pred ec-CCHHHHHHHHHHHHHHH
Confidence 98 67777777777776654
No 19
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.77 E-value=5.4e-19 Score=180.38 Aligned_cols=123 Identities=36% Similarity=0.642 Sum_probs=118.0
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCCCCccccccccc
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ----KEGSNKPWNHITDQIGM 79 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~----~~~~~~~w~~i~~Q~Gm 79 (420)
..+++.+.|..||+||.+++++++.+|+++++..+|.++++.|+++++..|..|++.|+ +.+.+++|.++..|.||
T Consensus 275 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~ 354 (405)
T 3k7y_A 275 FNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGL 354 (405)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSS
T ss_pred HHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceE
Confidence 45677788999999999999999999999999999999999999999999999999999 89989999999999999
Q ss_pred eeecCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 80 FCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 80 Fs~~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
|.+++|+++++++| ++++||++++||||+||++++||++++++|+++
T Consensus 355 f~~~~l~~~~~~~L-~~~gV~v~p~~Ris~a~~~~~~i~~~~~~i~~~ 401 (405)
T 3k7y_A 355 FSFVPLLAKIAEHL-KTHHIYIINNGRINVSGITKNNVDYIADKICLS 401 (405)
T ss_dssp EEECGGGGGGTTTT-TTTTEECCTTSEEEGGGCCTTHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHH-HHCCEeecCCCeEEEeccCHHHHHHHHHHHHHH
Confidence 99999999999999 999999999999999999999999999999987
No 20
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.74 E-value=1.1e-17 Score=167.57 Aligned_cols=247 Identities=14% Similarity=0.117 Sum_probs=181.1
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCC-CCCCCCCCCCHHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL-DKEYAPIIGAPDFGKLA 212 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~-~~~Y~p~~G~~~fr~a~ 212 (420)
++++ +..++.+++..+.+.+.. +++|||+.|. + .+++++.|.+|......+.. .+.|.+..|.+++|+++
T Consensus 6 ~~~~-~~~~~~~~~~~~~~~~~~---~~~i~l~~g~---~--~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 76 (422)
T 3fvs_A 6 QARR-LDGIDYNPWVEFVKLASE---HDVVNLGQGF---P--DFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKIL 76 (422)
T ss_dssp SCGG-GTTCCCCHHHHHHHHHHT---SCCEECCCSS---C--SSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHH
T ss_pred HHHH-hhccCccHHHHHHHHhhc---CCceEeCCCC---C--CCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHH
Confidence 4555 778888998888776643 5899999996 3 34677888888777665422 37999999999999999
Q ss_pred HHHHcCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 213 AQLAYGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 213 ~~~~~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
++++....+..+++ +.| +.|.|||+++.+++..+ +.| ||+|++++|+|+.|...
T Consensus 77 a~~~~~~~g~~~~~~~~i----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~~~~~~~ 131 (422)
T 3fvs_A 77 ASFFGELLGQEIDPLRNV----------------------LVTVGGYGALFTAFQAL--VDE-GDEVIIIEPFFDCYEPM 131 (422)
T ss_dssp HHHHHHHHTCCCCHHHHE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHH
T ss_pred HHHHHHhhCCCCCCCCcE----------------------EEECChHHHHHHHHHHH--cCC-CCEEEEcCCCchhhHHH
Confidence 99984322212233 344 67999999999988755 457 99999999999999988
Q ss_pred HhhcCc-------------------------c------------------------------------------------
Q psy16707 292 CKHTGL-------------------------E------------------------------------------------ 298 (420)
Q Consensus 292 ~~~aG~-------------------------~------------------------------------------------ 298 (420)
++..|+ .
T Consensus 132 ~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 211 (422)
T 3fvs_A 132 TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCI 211 (422)
T ss_dssp HHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEE
Confidence 876542 1
Q ss_pred ----------------------------------------------------------hhhhhhccCCCchHHHHHHHHH
Q psy16707 299 ----------------------------------------------------------KILIRAFYSSPPIHGARIVQEI 320 (420)
Q Consensus 299 ----------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~I 320 (420)
....+....+++..++.++...
T Consensus 212 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 291 (422)
T 3fvs_A 212 TDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAES 291 (422)
T ss_dssp EECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred EEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHH
Confidence 1111222345566777766665
Q ss_pred hCChhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH------------------HHH
Q psy16707 321 LGDPKLK-AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA------------------TQV 381 (420)
Q Consensus 321 L~dp~L~-~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~------------------~~v 381 (420)
|.++... ..|.+.++.++++++++|+.+.+.|++.| |..+.++.|+|.|+.++. +++
T Consensus 292 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (422)
T 3fvs_A 292 FEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVG----LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFV 367 (422)
T ss_dssp HHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHH
T ss_pred HhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEechhhcccccccccccccccHHHHH
Confidence 5421110 12345567778999999999999999987 677788999999975532 567
Q ss_pred HHHHHhCCeEEeCC-------------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 382 EKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 382 ~~Ll~e~~Vy~~p~-------------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
++|++++||++.|| + |||++. +.++|+...++|.+++
T Consensus 368 ~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~l 419 (422)
T 3fvs_A 368 KWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQAMDEKLRKWK 419 (422)
T ss_dssp HHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 88889999999873 2 999986 8899999999988875
No 21
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.74 E-value=1.1e-17 Score=166.80 Aligned_cols=241 Identities=14% Similarity=0.077 Sum_probs=174.6
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG 218 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g 218 (420)
+..++++++..+.+.+ .++++|||+.|. + .+++++.|.+|......+...+.|.+..|.+++++++++++..
T Consensus 5 ~~~~~~~~~~~~~~~~---~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~ 76 (410)
T 3e2y_A 5 IEGLDSNVWVEFTKLA---ADPSVVNLGQGF---P--DISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGK 76 (410)
T ss_dssp GTTCCCCHHHHTTTTT---TSTTSEECSSCC---C--CSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred hccCCccHHHHHHHHh---cCCCeEEecCCC---C--CCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHH
Confidence 5667777777665433 346899999996 4 3467788888887776543456899999999999999998832
Q ss_pred CCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 219 EDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 219 ~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
..+..+++ ++| +.|.||++++..++..+ +.| ||.|++++|+|+.|...++.+|+
T Consensus 77 ~~~~~~~~~~~i----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~~~~~~~~~~~g~ 131 (410)
T 3e2y_A 77 IYQRQIDPNEEI----------------------LVAVGAYGSLFNSIQGL--VDP-GDEVIIMVPFYDCYEPMVRMAGA 131 (410)
T ss_dssp HHTSCCCTTTSE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHHHTTC
T ss_pred HhCCCCCCCCCE----------------------EEeCCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhhHHHHHHcCC
Confidence 21112333 445 56999999999998755 457 89999999999999988876654
Q ss_pred c-------------------------------------------------------------------------------
Q psy16707 298 E------------------------------------------------------------------------------- 298 (420)
Q Consensus 298 ~------------------------------------------------------------------------------- 298 (420)
+
T Consensus 132 ~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~ 211 (410)
T 3e2y_A 132 VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEW 211 (410)
T ss_dssp EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred EEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhh
Confidence 0
Q ss_pred ---------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCC-hhh
Q psy16707 299 ---------------------------------------------------KILIRAFYSSPPIHGARIVQEILGD-PKL 326 (420)
Q Consensus 299 ---------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~d-p~L 326 (420)
....+....+++..++.++...|.+ ...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 291 (410)
T 3e2y_A 212 LVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKR 291 (410)
T ss_dssp CBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhcc
Confidence 1111233445577777777665542 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------------HHHHHHHHHhCCe
Q psy16707 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------------ATQVEKLIKEHSV 390 (420)
Q Consensus 327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------------~~~v~~Ll~e~~V 390 (420)
...|.+.++.++++++++|+.+.+.|++.| |....++.|+|.|+.+. .+++++|++++||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv 367 (410)
T 3e2y_A 292 MDDPECYFNSLPKELEVKRDRMVRLLNSVG----LKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKL 367 (410)
T ss_dssp TTSTTSHHHHHHHHHHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSE
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCE
Confidence 123455677788999999999999999987 67778899999985332 1677888899999
Q ss_pred EEeCC-------------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 391 YLTKD-------------G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 391 y~~p~-------------g--Ris~agl~~~ni~~la~AI~~ 417 (420)
++.|| + |||++. +.++|++..++|.+
T Consensus 368 ~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 368 TAIPVSAFCDSKSKPHFEKLVRFCFIK-KDSTLDAAEEIFRA 408 (410)
T ss_dssp ECEEGGGGSCTTTHHHHTTEEEEECCC-CHHHHHHHHHHHHT
T ss_pred EEeCchhhCCCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHh
Confidence 99873 1 899885 88888888888765
No 22
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.72 E-value=2.6e-17 Score=164.40 Aligned_cols=241 Identities=11% Similarity=0.048 Sum_probs=161.8
Q ss_pred CCChHHHHHHHH-HccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCC----CCCCCCCCCCHHHHHHHHHHH-
Q psy16707 143 KVPSSNLLTEAF-KKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL----DKEYAPIIGAPDFGKLAAQLA- 216 (420)
Q Consensus 143 ~~d~i~~l~~~~-~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~----~~~Y~p~~G~~~fr~a~~~~~- 216 (420)
.++++..+...+ +.+.++++|||+.|. ++..+++.+.++++...+..++. .+.|.+..|.++||+++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 89 (417)
T 3g7q_A 13 RHSGITRLMEDLNDGLRTPGAIMLGGGN---PAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLR 89 (417)
T ss_dssp ---CHHHHHHHHHC-----CCEECSCCC---CCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhhccCCCceEecCcC---CCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHH
Confidence 455666555444 444678999999996 65545555788888777654321 248999999999999999998
Q ss_pred --cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC-----EEEEc-CCCCCCc
Q psy16707 217 --YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK-----VIYVP-TPTWGNH 288 (420)
Q Consensus 217 --~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd-----~Vlvp-dP~w~ny 288 (420)
+|.. +++++| +.|.|||+|+.+++..+. .| || .|+++ +|+|+.|
T Consensus 90 ~~~g~~---~~~~~i----------------------~~t~G~t~al~~~~~~l~--~~-gd~~~~~~vi~~~~p~~~~~ 141 (417)
T 3g7q_A 90 ETLGWD---IEPQNI----------------------ALTNGSQSAFFYLFNLFA--GR-RADGSTKKVLFPLAPEYIGY 141 (417)
T ss_dssp HHHCCC---CCGGGE----------------------EEESCHHHHHHHHHHHHS--BC-----CCBEEEESSCCCHHHH
T ss_pred HHhCCC---CCcccE----------------------EEeCCcHHHHHHHHHHHc--CC-CccCCcceEEEeCCCccccc
Confidence 4433 345555 669999999999998663 46 66 99998 9999998
Q ss_pred HHHHhhc------C--------------c-------c-------------------------------------------
Q psy16707 289 IPICKHT------G--------------L-------E------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~a------G--------------~-------~------------------------------------------- 298 (420)
...+... + . .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~ 221 (417)
T 3g7q_A 142 ADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNA 221 (417)
T ss_dssp HC-----CCEEECCCEEEEEGGGEEEEECCGGGCCCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred hhhccchhhhccccCcccccCCcccccccCHHHhccccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCC
Confidence 7543110 0 0 0
Q ss_pred --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707 299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA 328 (420)
Q Consensus 299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~ 328 (420)
....+....+++..++.++..+|.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 297 (417)
T 3g7q_A 222 YGVPFPGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRN---- 297 (417)
T ss_dssp TCTTTTCCBCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTT----
T ss_pred CccccccccccccccCCCCCEEEEEechhccCCCcceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCc----
Confidence 11123334456777887777777653
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-----CCCHHHHHHHHHhCCeEEeCC-------
Q psy16707 329 QWLTEVKG-MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVEKLIKEHSVYLTKD------- 395 (420)
Q Consensus 329 ~w~~el~~-m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p~------- 395 (420)
+|.++++. ++++|+++|+.+.+.|++.-....|....++.|+|.|+ +.+.+.+...+.++||++.|+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~ 377 (417)
T 3g7q_A 298 DLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGL 377 (417)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTB
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCC
Confidence 45555555 77899999999999988741111266677889999986 345555544447899999863
Q ss_pred --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++. +.++|++..++|.+++
T Consensus 378 ~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l 410 (417)
T 3g7q_A 378 DKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEI 410 (417)
T ss_dssp SSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHH
T ss_pred ccccccCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 1 999986 8889999999988875
No 23
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.72 E-value=1.6e-16 Score=157.84 Aligned_cols=238 Identities=16% Similarity=0.156 Sum_probs=166.5
Q ss_pred ccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
+..+.++++..+.+.+++ ..+.+.|||+.|. ..+++++.|.+|......+ ....|.+..|.++||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~-----~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~~ 81 (391)
T 3h14_A 8 RSAVDPFIVMDVMEAARRAEEAGRRIIHMEVGQ-----PGTGAPRGAVEALAKSLET-DALGYTVALGLPALRQRIARLY 81 (391)
T ss_dssp TTCCCCCTTHHHHHHHHHHHHTTCCCEECCCSS-----CSSCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHH
T ss_pred HhhcCcchHHHHHHHHHHHHhcCCCeEEccCCC-----CCCCCCHHHHHHHHHHHhc-CCCCCCCCCChHHHHHHHHHHH
Confidence 677777777766655433 3456899999996 3345678888888776643 4578999999999999999998
Q ss_pred cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707 217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG 296 (420)
Q Consensus 217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG 296 (420)
....+..+.++.| +.|.|||+|+.+++..+ +.| ||+|++++|+|+.|...++..|
T Consensus 82 ~~~~g~~~~~~~v----------------------~~t~g~~~al~~~~~~l--~~~-gd~vl~~~p~~~~~~~~~~~~g 136 (391)
T 3h14_A 82 GEWYGVDLDPGRV----------------------VITPGSSGGFLLAFTAL--FDS-GDRVGIGAPGYPSYRQILRALG 136 (391)
T ss_dssp HHHHCCCCCGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHHHHHTT
T ss_pred HHHhCCCCCHHHE----------------------EEecChHHHHHHHHHHh--cCC-CCEEEEcCCCCccHHHHHHHcC
Confidence 3211111334545 67999999999998755 457 9999999999999999988877
Q ss_pred cc------------------------------------------------------------------------------
Q psy16707 297 LE------------------------------------------------------------------------------ 298 (420)
Q Consensus 297 ~~------------------------------------------------------------------------------ 298 (420)
++
T Consensus 137 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 216 (391)
T 3h14_A 137 LVPVDLPTAPENRLQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTAL 216 (391)
T ss_dssp CEEEEEECCGGGTTSCCHHHHTTSCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGG
T ss_pred CEEEEeecCcccCCCCCHHHHHhcCCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChh
Confidence 64
Q ss_pred ------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q psy16707 299 ------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRII 342 (420)
Q Consensus 299 ------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~ 342 (420)
....+....+++..++.++...|.+ .+.++.++++++
T Consensus 217 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~~~~~~~~~~~ 289 (391)
T 3h14_A 217 ELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDC-------DAELQANLDVYK 289 (391)
T ss_dssp GTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTC-------HHHHHHHHHHHH
T ss_pred hcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCC-------hHHHHHHHHHHH
Confidence 1112334456677777766665642 245666779999
Q ss_pred HHHHHHHHHHHhcCCCCCCcc-cCCCCceEEec-----CCCH-HHHHHHHHhCCeEEeCC-----------CcEEEcccC
Q psy16707 343 SMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYT-----GLNA-TQVEKLIKEHSVYLTKD-----------GRISMAGVT 404 (420)
Q Consensus 343 ~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~-----~l~~-~~v~~Ll~e~~Vy~~p~-----------gRis~agl~ 404 (420)
++|+.+.+.|++.| +.. ..++.|+|.|+ +.+. +.+++|++++||++.|+ -|||++. +
T Consensus 290 ~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~ 364 (391)
T 3h14_A 290 ANRKLMLERLPKAG----FTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-A 364 (391)
T ss_dssp HHHHHHHHHHHHHT----CCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-C
T ss_pred HHHHHHHHHHHHcC----CCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-C
Confidence 99999999999987 443 46677898886 3344 45588888899999863 1999986 7
Q ss_pred CCCHHHHHHHHHHHh
Q psy16707 405 SKNVGYLAKAIHAVT 419 (420)
Q Consensus 405 ~~ni~~la~AI~~vv 419 (420)
++.++...++|.+++
T Consensus 365 ~~~i~~~l~~l~~~~ 379 (391)
T 3h14_A 365 TADIEEGLDRLEAFM 379 (391)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 788888888887764
No 24
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.72 E-value=3.1e-16 Score=155.48 Aligned_cols=241 Identities=17% Similarity=0.216 Sum_probs=178.1
Q ss_pred cchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHH
Q psy16707 133 RFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLA 212 (420)
Q Consensus 133 ~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~ 212 (420)
.++++ +..++++++..+.+.+++. ++.|||+.|. ++ ++.++.|.+|.....++ ....|.+..|.+++++++
T Consensus 2 ~~~~~-~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~l 72 (389)
T 1gd9_A 2 ALSDR-LELVSASEIRKLFDIAAGM--KDVISLGIGE---PD--FDTPQHIKEYAKEALDK-GLTHYGPNIGLLELREAI 72 (389)
T ss_dssp CHHHH-HHHSCCCHHHHHHHHHHTC--SSCEECCCCS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHH
T ss_pred chhhH-hHhCChhHHHHHHHHHhhh--cCeEecCCCC---CC--CCCCHHHHHHHHHHHhC-CCCCCCCCCCcHHHHHHH
Confidence 35555 7788899999999888765 5789999996 32 34567788777766543 346799999999999999
Q ss_pred HHHHc---CCCCccccCCc-eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 213 AQLAY---GEDCPQLKDNL-ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 213 ~~~~~---g~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
++++. |.+ +++++ | +.|.|||.|+.+++..+ +.| ||.|++++|+|+.|
T Consensus 73 a~~~~~~~g~~---~~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~~~~~~~ 124 (389)
T 1gd9_A 73 AEKLKKQNGIE---ADPKTEI----------------------MVLLGANQAFLMGLSAF--LKD-GEEVLIPTPAFVSY 124 (389)
T ss_dssp HHHHHHHHCCC---CCTTTSE----------------------EEESSTTHHHHHHHTTT--CCT-TCEEEEEESCCTTH
T ss_pred HHHHHHHhCCC---CCCCCeE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCchhH
Confidence 99983 532 23455 5 56999999999988644 457 89999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
...++..|++
T Consensus 125 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~ 204 (389)
T 1gd9_A 125 APAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEH 204 (389)
T ss_dssp HHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhh
Confidence 9888776653
Q ss_pred ------------------------------------------------h---hhhhhccCCCchHHHHHHHHHhCChhhH
Q psy16707 299 ------------------------------------------------K---ILIRAFYSSPPIHGARIVQEILGDPKLK 327 (420)
Q Consensus 299 ------------------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~dp~L~ 327 (420)
. ........+++..++.++...|.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~--- 281 (389)
T 1gd9_A 205 FIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDE--- 281 (389)
T ss_dssp CBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCH---
T ss_pred cccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---
Confidence 0 1111222455667777666667642
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC------
Q psy16707 328 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD------ 395 (420)
Q Consensus 328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~------ 395 (420)
.+| +.++.++++++++|+.+.+.|++.| |....++.|+|.|+.+ +. +.++.|++++||++.|+
T Consensus 282 ~~~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~ 356 (389)
T 1gd9_A 282 RSW-KAVEEMRKEYDRRRKLVWKRLNEMG----LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKA 356 (389)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGG
T ss_pred Ccc-hHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCC
Confidence 222 3577778999999999999999886 6666778899988544 44 44577777999999874
Q ss_pred --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++. +.++++...++|.+++
T Consensus 357 ~~~~iRi~~~~-~~~~i~~~l~~l~~~~ 383 (389)
T 1gd9_A 357 GEGYVRISYAT-AYEKLEEAMDRMERVL 383 (389)
T ss_dssp GTTBEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 2 999985 7788888888887764
No 25
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.70 E-value=3.5e-16 Score=155.14 Aligned_cols=237 Identities=14% Similarity=0.094 Sum_probs=172.8
Q ss_pred ccccCCChHHHHHHHHHc---cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKK---DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL 215 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~---d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~ 215 (420)
++.+.+.++..+.+.... +.+.+.|||+.|. + ..++++.|++|...... ....|.+..|.++||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~ 78 (396)
T 3jtx_A 6 LKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGE---P--KHPTPKVITDALTASLH--ELEKYPLTAGLPELRQACANW 78 (396)
T ss_dssp HHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCS---C--CSCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHHHH
T ss_pred hccCCCChHHHHHHHHHhhhhccCCCeEEeCCcC---C--CCCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHHHH
Confidence 556667777666655443 4578899999997 3 34567888888777653 467899999999999999999
Q ss_pred HcCCCCcc-ccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC-----CEEEEcCCCCCCc
Q psy16707 216 AYGEDCPQ-LKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-----KVIYVPTPTWGNH 288 (420)
Q Consensus 216 ~~g~~~~~-~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-----d~VlvpdP~w~ny 288 (420)
+....+.. ++++ .| +.|.||++++.+++..+ +.| | |+|++++|+|+.|
T Consensus 79 l~~~~g~~~~~~~~~i----------------------~~t~g~~~al~~~~~~~--~~~-g~~~~~d~vl~~~p~~~~~ 133 (396)
T 3jtx_A 79 LKRRYDGLTVDADNEI----------------------LPVLGSREALFSFVQTV--LNP-VSDGIKPAIVSPNPFYQIY 133 (396)
T ss_dssp HHHHTTTCCCCTTTSE----------------------EEESSHHHHHHHHHHHH--CCC----CCCCEEEEEESCCHHH
T ss_pred HHHhcCCCCCCCCCeE----------------------EEcCCcHHHHHHHHHHH--hCC-CCccCCCEEEEcCCCcHhH
Confidence 84222211 2344 55 56999999999998765 446 5 7999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
...++.+|++
T Consensus 134 ~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 213 (396)
T 3jtx_A 134 EGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEI 213 (396)
T ss_dssp HHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTC
T ss_pred HHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 9999888764
Q ss_pred ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707 299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP 324 (420)
Q Consensus 299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp 324 (420)
.........+++..++.++...|.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~- 292 (396)
T 3jtx_A 214 YFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDD- 292 (396)
T ss_dssp CSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC-
T ss_pred ccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC-
Confidence 0001122234566666666655543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC-----
Q psy16707 325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD----- 395 (420)
Q Consensus 325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~----- 395 (420)
.+.++.++++++++|+.+.+.|++. +....++.|+|.|+.++ .+++++|++++||++.|+
T Consensus 293 ------~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~ 361 (396)
T 3jtx_A 293 ------EQHVIDNRRLYQEKFERVIPILQQV-----FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLAR 361 (396)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHTTT-----SCCCCCSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCC
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHhc-----CCccCCCeeEEEEEECCCCCHHHHHHHHHHHCCEEEeCChHhCC
Confidence 2456677799999999999999865 23456788999997654 466788888999999763
Q ss_pred ---------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 396 ---------G--RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 396 ---------g--Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
+ |||++. +.+++++..++|.++++
T Consensus 362 ~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~ 396 (396)
T 3jtx_A 362 DTEQGNPGEGYVRIALVA-DVATCVKAAEDIVSLYR 396 (396)
T ss_dssp CCTTCCTTTTEEEEECCS-CHHHHHHHHHHHHHHCC
T ss_pred cccccCCCCCeEEEEEcC-CHHHHHHHHHHHHHHhC
Confidence 2 999986 88899999999988764
No 26
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.69 E-value=8.1e-16 Score=157.00 Aligned_cols=237 Identities=15% Similarity=0.093 Sum_probs=164.6
Q ss_pred cCCChHHHHHHHHHc------cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707 142 VKVPSSNLLTEAFKK------DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL 215 (420)
Q Consensus 142 ~~~d~i~~l~~~~~~------d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~ 215 (420)
+.++++..+.+.+.+ ..+.+.|||+.|. ++ +.+++.|.+|......+...+.|.+..|.++|+++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 107 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGF---FS--YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKL 107 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCS---CS--SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCC---CC--CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHH
Confidence 666777777766632 2456899999996 33 346678888877766432357899999999999999999
Q ss_pred HcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707 216 AYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT 295 (420)
Q Consensus 216 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a 295 (420)
+....+..++++.| +.|.||++|+.+++..+ +.| ||+|++++|+|+.|...++.+
T Consensus 108 l~~~~g~~~~~~~v----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~ 162 (447)
T 3b46_A 108 YSPIYNTELKAENV----------------------TVTTGANEGILSCLMGL--LNA-GDEVIVFEPFFDQYIPNIELC 162 (447)
T ss_dssp HTTTTTSCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHHHT
T ss_pred HHHhcCCCCChhhE----------------------EEeCCHHHHHHHHHHHH--cCC-CCEEEEeCCCchhHHHHHHHc
Confidence 84322222334444 67999999999998755 457 999999999999999888765
Q ss_pred Cc-----------------------c------------------------------------------------------
Q psy16707 296 GL-----------------------E------------------------------------------------------ 298 (420)
Q Consensus 296 G~-----------------------~------------------------------------------------------ 298 (420)
|+ .
T Consensus 163 g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~ 242 (447)
T 3b46_A 163 GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEV 242 (447)
T ss_dssp TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEecc
Confidence 42 1
Q ss_pred ----------------------------------------------------h---hhhhhccCCCchHHHHHHHHHhCC
Q psy16707 299 ----------------------------------------------------K---ILIRAFYSSPPIHGARIVQEILGD 323 (420)
Q Consensus 299 ----------------------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~d 323 (420)
. ........+++...+.++...|.+
T Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~ 322 (447)
T 3b46_A 243 YEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSIND 322 (447)
T ss_dssp TTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred chhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence 0 000111223344455444444432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------------------H-HHHHH
Q psy16707 324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------------------A-TQVEK 383 (420)
Q Consensus 324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------------------~-~~v~~ 383 (420)
..+.+.++.++++++++|+.+.+.|+++| |..+.++.|+|.|+.++ . +++++
T Consensus 323 ----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 394 (447)
T 3b46_A 323 ----ALKIGYFEKMRQEYINKFKIFTSIFDELG----LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHW 394 (447)
T ss_dssp ----HHHHTHHHHHHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHH
T ss_pred ----CcchHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHH
Confidence 11234567788999999999999999987 66677888999985432 2 56678
Q ss_pred HHHhCCeEEeCC-------------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707 384 LIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHA 417 (420)
Q Consensus 384 Ll~e~~Vy~~p~-------------g--Ris~agl~~~ni~~la~AI~~ 417 (420)
|++++||++.|+ + |||++. ++++|+...+.|.+
T Consensus 395 l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~-~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 395 LINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK-DDAYLENAVERLKL 442 (447)
T ss_dssp HHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-CHHHHHHHHHHGGG
T ss_pred HHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-CHHHHHHHHHHHHH
Confidence 888999999874 2 999984 66666666666654
No 27
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.69 E-value=1.5e-16 Score=162.75 Aligned_cols=124 Identities=41% Similarity=0.655 Sum_probs=118.3
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CCcccccccc
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK-----PWNHITDQIG 78 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~-----~w~~i~~Q~G 78 (420)
..+++.+.|..+++||.+++.++..+|.+++|+++|.++++.|++|++.+|+.|++.|++.+.++ +|+++..|.|
T Consensus 311 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g 390 (448)
T 3meb_A 311 VSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIG 390 (448)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCS
T ss_pred HHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCce
Confidence 45667788999999999999999999999999999999999999999999999999999998887 8999999999
Q ss_pred ceeecCCCHHHHHHHHHhcceEEcC-CCceecccCCcCCHHHHHHHHHhh
Q psy16707 79 MFCYTGLNATQVEKLIKEHSVYLTK-DGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 79 mFs~~gL~~~qv~~L~~~~~IY~~~-~GRinvagl~~~ni~~va~ai~~v 127 (420)
||++++++.++++.|.++++||+.+ +||||++++++.+|++++++|.++
T Consensus 391 ~~~~~~~~~~~~~~ll~~~gV~v~~G~gRis~a~~~~~~i~~~~~~l~~~ 440 (448)
T 3meb_A 391 MFTFTGLTPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEAIHDA 440 (448)
T ss_dssp SEEECCCCHHHHHHHHHHHCEEECSGGGEEEGGGCCTTTHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHHhCCEEEeCCCcEEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 999999999999999999999987
No 28
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.69 E-value=3.9e-16 Score=160.13 Aligned_cols=247 Identities=13% Similarity=0.135 Sum_probs=177.8
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a 211 (420)
+|++ ...+..+++..+.+.+. +++.|||+.|. ++....+++.|.+|.....++. ....|.+..|.++||++
T Consensus 54 ~s~~-~~~~~~s~~~~~~~~~~---~~~~i~l~~g~---p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ 126 (448)
T 3aow_A 54 FSKK-ALEMRASEVRELLKLVE---TSDIISLAGGL---PNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRET 126 (448)
T ss_dssp CCHH-HHHCCCCHHHHHHHHHH---TSSSEECCCCC---CCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHH
T ss_pred hhHH-HhcCCCcHHHHHHHhcc---CCCcEeCCCCC---CCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHH
Confidence 5655 66778888887776654 45789999997 4444457788888777665431 13589999999999999
Q ss_pred HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+++++....+.. +++.| +.|.|||.|+.+++..+ +.| ||.|++++|+|+.|...
T Consensus 127 ia~~~~~~~g~~-~~~~v----------------------~~t~G~~~al~~~~~~l--~~~-Gd~Vlv~~p~y~~~~~~ 180 (448)
T 3aow_A 127 LMKWLGKRYGIS-QDNDI----------------------MITSGSQQALDLIGRVF--LNP-GDIVVVEAPTYLAALQA 180 (448)
T ss_dssp HHHHHHHHHCCC-TTSEE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHH
T ss_pred HHHHHHHhcCcC-ChhhE----------------------EEeCcHHHHHHHHHHHH--cCC-CCEEEEeCCChHHHHHH
Confidence 999882211111 24444 67999999999998766 457 99999999999999876
Q ss_pred HhhcCcc-------------------------------------------------------------------------
Q psy16707 292 CKHTGLE------------------------------------------------------------------------- 298 (420)
Q Consensus 292 ~~~aG~~------------------------------------------------------------------------- 298 (420)
++..|++
T Consensus 181 ~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~ 260 (448)
T 3aow_A 181 FNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYG 260 (448)
T ss_dssp HHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCT
T ss_pred HHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 6554431
Q ss_pred -----------------------------------------------hh---hhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707 299 -----------------------------------------------KI---LIRAFYSSPPIHGARIVQEILGDPKLKA 328 (420)
Q Consensus 299 -----------------------------------------------~~---~~r~~~s~pp~~ga~iv~~IL~dp~L~~ 328 (420)
.. .......+++..++.++...|.+.
T Consensus 261 ~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---- 336 (448)
T 3aow_A 261 ELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGG---- 336 (448)
T ss_dssp TCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTT----
T ss_pred cccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhC----
Confidence 11 112222345777887777767542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--------
Q psy16707 329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD-------- 395 (420)
Q Consensus 329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~-------- 395 (420)
.|.+.++.++++++++|+.+.+.|++.- |+.+....++.|||.|+.+ +. +.+++|+++ ||++.|+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~g~~~~~p~~g~~~~v~~~~~~~~~~l~~~l~~~-gV~v~pg~~f~~~~~ 414 (448)
T 3aow_A 337 YLEKHIPEIRKFYKPRRDAMLEALEEFM-PEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKK-GVAYVPGEAFYAHRD 414 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CTTCEECCCSBSSEEEEECSTTCCHHHHHHHHHHT-TEECEEGGGGSTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEeCCCccEEEEEEcCCCCCHHHHHHHHHHC-CcEEEcchhhcCCCC
Confidence 4667788888999999999999998751 1115656778899999754 34 455777655 9999873
Q ss_pred --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++..+.++|+...++|.+++
T Consensus 415 ~~~~iRls~~~~~~e~i~~~~~~L~~~l 442 (448)
T 3aow_A 415 VKNTMRLNFTYVDEDKIMEGIKRLAETI 442 (448)
T ss_dssp CCSEEEEECSSSCTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 1 99999778899999998888765
No 29
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.68 E-value=5e-17 Score=161.60 Aligned_cols=237 Identities=13% Similarity=0.104 Sum_probs=161.2
Q ss_pred cccCCChHHHHHHHHHccCCCCc-----eeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHH
Q psy16707 140 SSVKVPSSNLLTEAFKKDTNVNK-----INLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQ 214 (420)
Q Consensus 140 ~~~~~d~i~~l~~~~~~d~~~~k-----InL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~ 214 (420)
...+.|+++...+.++.+....+ |||+.|.| ++ .++++.|++|......+...+.|.+..|.+++++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~g~~---~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~ 89 (407)
T 3nra_A 14 DNAPGQEVRQSAAGLEALIRGAPIEGRPVDFSHGDV---DA-HEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAP 89 (407)
T ss_dssp -------------CCTTTCCSCCCCSCCEETTSCCT---TT-SCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHH
T ss_pred CCCccHHHHHHhhhhHHHhhcCCCCCceeeecCcCC---CC-CCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHH
Confidence 34456667766665555655555 99999974 33 45667777777766543334579999999999999999
Q ss_pred HH---cCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 215 LA---YGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 215 ~~---~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
++ +|.+ +++ +.| +.|.|||+|+.+++..+ +.| ||+|++++|+|++|..
T Consensus 90 ~l~~~~g~~---~~~~~~i----------------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~ 141 (407)
T 3nra_A 90 RLAAFTGAP---VDARDGL----------------------IITPGTQGALFLAVAAT--VAR-GDKVAIVQPDYFANRK 141 (407)
T ss_dssp HHHHHHTSC---CCTTTSE----------------------EEESHHHHHHHHHHHTT--CCT-TCEEEEEESCCTHHHH
T ss_pred HHHHHhCCC---CCCCCcE----------------------EEeCCcHHHHHHHHHHh--CCC-CCEEEEcCCcccchHH
Confidence 88 5543 222 344 66999999999988644 457 9999999999999998
Q ss_pred HHhhcCcc------------------------------------------------------------------------
Q psy16707 291 ICKHTGLE------------------------------------------------------------------------ 298 (420)
Q Consensus 291 i~~~aG~~------------------------------------------------------------------------ 298 (420)
.++.+|++
T Consensus 142 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~ 221 (407)
T 3nra_A 142 LVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLY 221 (407)
T ss_dssp HHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 88877642
Q ss_pred ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707 299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP 324 (420)
Q Consensus 299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp 324 (420)
....+....++|..++.++..+|.+.
T Consensus 222 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 301 (407)
T 3nra_A 222 SRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA 301 (407)
T ss_dssp TTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC
T ss_pred cccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhcc
Confidence 11112233344555555554445431
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC-----H-HHHHHHHHhCCeEEeCCC-
Q psy16707 325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN-----A-TQVEKLIKEHSVYLTKDG- 396 (420)
Q Consensus 325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~-----~-~~v~~Ll~e~~Vy~~p~g- 396 (420)
.+| ++.++++++++|+.+.+.|+++ | |..+.++.|+|.|+.++ . ++++.|++++||++.|+.
T Consensus 302 ---~~~---~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 371 (407)
T 3nra_A 302 ---PGW---MEDRIARHQAIRDELLHVLRGCEG----VFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTE 371 (407)
T ss_dssp ---TTH---HHHHHHHHHHHHHHHHHHHHTSTT----CBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGG
T ss_pred ---chH---HHHHHHHHHHHHHHHHHHHhcCCC----ceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 133 4556688999999999999987 4 67777888899987543 3 556788888999998742
Q ss_pred ---------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 397 ---------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 ---------Ris~agl~~~ni~~la~AI~~vv 419 (420)
|||++. +.++|+++.++|.+++
T Consensus 372 ~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~ 402 (407)
T 3nra_A 372 FSPHTADSVRLNFSQ-DHEAAVAAARRIVTLV 402 (407)
T ss_dssp TCTTCTTBEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred hCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 999995 8888999999988875
No 30
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.68 E-value=2.6e-16 Score=158.93 Aligned_cols=244 Identities=15% Similarity=0.117 Sum_probs=167.0
Q ss_pred cCCChHHHHHHHHHcc-----CCCCceeecccccccCCCCCCc-hHHHHHHH--HHHHcc--CCCCCCCCCCCCHHHHHH
Q psy16707 142 VKVPSSNLLTEAFKKD-----TNVNKINLGVGAYRDDQGKPYV-LPSVKQAD--EIVLNK--NLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 142 ~~~d~i~~l~~~~~~d-----~~~~kInL~iG~y~d~dg~~~~-~~~V~~a~--~~~~~~--~~~~~Y~p~~G~~~fr~a 211 (420)
+..|++..+...+.++ ..+++|||+.|. ++....+ .+.+.++. ..+..+ ...+.|.+..|.++||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~---p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 86 (427)
T 3ppl_A 10 FDAERIGLFHEDIKRKFDELKSKNLKLDLTRGK---PSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQI 86 (427)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTCCCEECCCCS---CCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHH
T ss_pred HhHHHHHHhHHHHHHHHHHhhcCCceEecCCCC---CChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHH
Confidence 3444444444443333 456889999997 4432221 12466554 333222 235799999999999999
Q ss_pred HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHH--HHHHHHHhcCC---------CCCEEEE
Q psy16707 212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLR--VGAAFLKNFFP---------GEKVIYV 280 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~--~~~~~l~~~~p---------~gd~Vlv 280 (420)
+++++ + +++++| +.|.|+++++. +++..+....| .||+|++
T Consensus 87 ia~~~-~-----~~~~~i----------------------~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v 138 (427)
T 3ppl_A 87 WADLL-G-----VPVEQV----------------------LAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWIC 138 (427)
T ss_dssp HHHHH-T-----SCGGGE----------------------EECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEE
T ss_pred HHHHh-C-----CCcceE----------------------EEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEE
Confidence 99988 3 234455 66999999994 66654433213 1799999
Q ss_pred cCCCCCCcHHHHhhcCcc--------------------------------------------------------------
Q psy16707 281 PTPTWGNHIPICKHTGLE-------------------------------------------------------------- 298 (420)
Q Consensus 281 pdP~w~ny~~i~~~aG~~-------------------------------------------------------------- 298 (420)
++|+|+.|...++.+|++
T Consensus 139 ~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~i 218 (427)
T 3ppl_A 139 PVPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRV 218 (427)
T ss_dssp EESCCHHHHHHHHHTTCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEE
T ss_pred cCCCcHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEE
Confidence 999999999999988875
Q ss_pred ---------------------------------------------------------------hhhhhhccCCCchHHHH
Q psy16707 299 ---------------------------------------------------------------KILIRAFYSSPPIHGAR 315 (420)
Q Consensus 299 ---------------------------------------------------------------~~~~r~~~s~pp~~ga~ 315 (420)
....+....+++...+.
T Consensus 219 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~ 298 (427)
T 3ppl_A 219 VWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQL 298 (427)
T ss_dssp EEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHH
T ss_pred EEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHH
Confidence 11112233456777787
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeE
Q psy16707 316 IVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVY 391 (420)
Q Consensus 316 iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy 391 (420)
++...|.+. +.|.++++.+++.++++|+.+.+.|++. +.-+.+....++.|+|.|+.++ .+++..+++++||+
T Consensus 299 ~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~ 375 (427)
T 3ppl_A 299 AHARYFGDA---EGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGIA 375 (427)
T ss_dssp HHHHHHCSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTTCHHHHHHHHHHTTEE
T ss_pred HHHHHHhCh---hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcchHHHHHHHHHHCCCE
Confidence 777778762 3456777888889999998888888652 1001255567789999997654 55665566899999
Q ss_pred EeCCC--------------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 392 LTKDG--------------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 392 ~~p~g--------------Ris~agl~~~ni~~la~AI~~vv 419 (420)
+.|+| |||++..+.++|++..++|.+++
T Consensus 376 v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l 417 (427)
T 3ppl_A 376 LTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCV 417 (427)
T ss_dssp CCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred EecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHH
Confidence 99831 99998778889999988888765
No 31
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.67 E-value=1e-16 Score=161.33 Aligned_cols=224 Identities=13% Similarity=0.105 Sum_probs=163.6
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHH--cc-CCCCCCCCCCCC-----HHHHHHHHHHHcCCCCccccC-Cc
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVL--NK-NLDKEYAPIIGA-----PDFGKLAAQLAYGEDCPQLKD-NL 228 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~--~~-~~~~~Y~p~~G~-----~~fr~a~~~~~~g~~~~~~~~-~~ 228 (420)
..+++|||++|. ++ +++++.++++..... .. .....|.+..|. ++||+++++++- ..+..+.+ ++
T Consensus 20 ~~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~ 93 (391)
T 3bwn_A 20 MSDFVVNLDHGD---PT--AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRY 93 (391)
T ss_dssp TTTSCEECSSCC---CG--GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSE
T ss_pred CCCCeeEcCCCC---CC--CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCe
Confidence 456789999996 44 355677777652221 11 145689999999 999999999873 22222223 34
Q ss_pred eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC----EEEEcCCCCCCcHHHHhhcCcc------
Q psy16707 229 ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK----VIYVPTPTWGNHIPICKHTGLE------ 298 (420)
Q Consensus 229 i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd----~VlvpdP~w~ny~~i~~~aG~~------ 298 (420)
| +.|.|+++++.+++..+.. | || +|++++|+|++|..+++.+|++
T Consensus 94 i----------------------~~t~G~~~al~~~~~~l~~--~-Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~ 148 (391)
T 3bwn_A 94 I----------------------VVGTGSTQLCQAAVHALSS--L-ARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEG 148 (391)
T ss_dssp E----------------------EEEEHHHHHHHHHHHHHHH--T-SSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEE
T ss_pred E----------------------EEeCChHHHHHHHHHHhcC--C-CCCCcceEEEcCCCchhHHHHHHHcCCeEEEecC
Confidence 4 6799999999999876643 7 89 9999999999999999988764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 149 d~~~l~~~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~ 228 (391)
T 3bwn_A 149 DAWGFDKKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFSKITGHAGSRIGW 228 (391)
T ss_dssp ESTTCCCCSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEE
T ss_pred CHHHcCCCCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEechhhcCCCccceEE
Confidence
Q ss_pred ------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707 299 ------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQW-------LTEVKGMADRIISMRQSLKDNLQKEGSNK 359 (420)
Q Consensus 299 ------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w-------~~el~~m~~r~~~~R~~l~~~L~~~g~~~ 359 (420)
........+++|..+|.++...|++. .+| .+.++.++++++++|+.+.+.|++.+ +
T Consensus 229 ~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~ 303 (391)
T 3bwn_A 229 ALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVL---KETCKSESESENFFKYGREMMKNRWEKLREVVKESD--A 303 (391)
T ss_dssp EEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHH---HHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCS--S
T ss_pred EEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCc---chhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCC--C
Confidence 11112224667888888877777543 123 45678888999999999999999862 1
Q ss_pred CCccc-------------CCCCceEEecCCC-HHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHH
Q psy16707 360 PWNHI-------------TDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIH 416 (420)
Q Consensus 360 ~w~~i-------------~~q~GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~ 416 (420)
|... .++.|+|.|+.++ .+++..+++++||++.|+ + |||++. +.++++++.++|.
T Consensus 304 -~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~-~~e~i~~~~~~L~ 381 (391)
T 3bwn_A 304 -FTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS-REDVFNVFLERLA 381 (391)
T ss_dssp -EECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS-CHHHHHHHHHHHH
T ss_pred -cccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC-CHHHHHHHHHHHH
Confidence 2221 2467889998775 456777789999999984 3 999996 7778999999988
Q ss_pred HHh
Q psy16707 417 AVT 419 (420)
Q Consensus 417 ~vv 419 (420)
+++
T Consensus 382 ~~~ 384 (391)
T 3bwn_A 382 NMK 384 (391)
T ss_dssp SCC
T ss_pred HHH
Confidence 764
No 32
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.67 E-value=9.9e-16 Score=153.95 Aligned_cols=237 Identities=12% Similarity=0.093 Sum_probs=167.2
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH--
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA-- 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~-- 216 (420)
+..+.+.++..+.+..++.++.+.|||+.|.+ + +..++.|++|......+...+.|.+..|.++|++++++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~---~--~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 100 (404)
T 2o1b_A 26 LANIPDSYFGKTMGRKIEHGPLPLINMAVGIP---D--GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQR 100 (404)
T ss_dssp HHTSCCCTTC-------CCCSSCCEECCCCSC---S--SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhCCchHHHHHHHHHHhcCCCCEEecCCcCC---C--CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 55666666666655554444566899999973 2 3356788888777653322457998899999999999998
Q ss_pred -cCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhh
Q psy16707 217 -YGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKH 294 (420)
Q Consensus 217 -~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~ 294 (420)
+|.+ +++ +.| +.|.|||+++.+++..+ +.| ||.|++++|+|+.|...++.
T Consensus 101 ~~g~~---~~~~~~v----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~~~~ 152 (404)
T 2o1b_A 101 QYNVT---LDKEDEV----------------------CILYGTKNGLVAVPTCV--INP-GDYVLLPDPGYTDYLAGVLL 152 (404)
T ss_dssp HHCCC---CCTTTSE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCSSHHHHHHH
T ss_pred HhCCC---CCCcccE----------------------EEcCCcHHHHHHHHHHh--cCC-CCEEEEcCCCchhHHHHHHH
Confidence 4543 222 344 56999999999998765 457 89999999999999998887
Q ss_pred cCcc----------------------------------------------------------------------------
Q psy16707 295 TGLE---------------------------------------------------------------------------- 298 (420)
Q Consensus 295 aG~~---------------------------------------------------------------------------- 298 (420)
.|++
T Consensus 153 ~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 232 (404)
T 2o1b_A 153 ADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKN 232 (404)
T ss_dssp TTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCC
T ss_pred CCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCC
Confidence 7653
Q ss_pred -------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707 299 -------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVK 335 (420)
Q Consensus 299 -------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~ 335 (420)
.........+++..++.++...|.+. .+.++
T Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~ 306 (404)
T 2o1b_A 233 PSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHY------DDFLE 306 (404)
T ss_dssp CCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC------HHHHH
T ss_pred CChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC------HHHHH
Confidence 01112222355666666665555321 23466
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC--------C--cEEE
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD--------G--RISM 400 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~--------g--Ris~ 400 (420)
.++++++++|+.+.+.|++.| |....++.|+|.|+.++ . +.+++|++++||++.|+ + |||+
T Consensus 307 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~ 382 (404)
T 2o1b_A 307 EQSNVFKTRRDRFEAMLAKAD----LPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISL 382 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----CCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEE
Confidence 677899999999999999886 66667788999986443 3 45678888899999874 2 9999
Q ss_pred cccCCCCHHHHHHHHHHHh
Q psy16707 401 AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 401 agl~~~ni~~la~AI~~vv 419 (420)
+. ++++++...++|.+++
T Consensus 383 ~~-~~e~l~~~l~~l~~~l 400 (404)
T 2o1b_A 383 AL-DDQKLDEAAIRLTELA 400 (404)
T ss_dssp CS-CTTHHHHHHHHHHGGG
T ss_pred cC-CHHHHHHHHHHHHHHH
Confidence 96 8889999999988775
No 33
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.67 E-value=7.8e-16 Score=154.42 Aligned_cols=244 Identities=16% Similarity=0.184 Sum_probs=157.3
Q ss_pred cccchhhhccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHH
Q psy16707 131 PIRFQDARTSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDF 208 (420)
Q Consensus 131 p~~~~~~~~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~f 208 (420)
||.++++ +..+.+.++..+...++ ...+.+.|||+.|. ++ +..++.|.+|......+...+.|.+..|.++|
T Consensus 7 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l 80 (412)
T 2x5d_A 7 PARRFAR-IDRLPPYVFNITAELKMAARRRGEDIIDLSMGN---PD--GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRL 80 (412)
T ss_dssp ---------------CHHHHHHHHHHHHHTTCCCEECSSCC---CC--SCCCHHHHHHHHHTC---------CTTCCHHH
T ss_pred ccchhHH-HhhcCchHHHHHHHHHHHHhhcCCCEEecCCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHH
Confidence 4556666 66777666666554443 12356789999997 32 34677888887765543235689999999999
Q ss_pred HHHHHHHH---cCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCC
Q psy16707 209 GKLAAQLA---YGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPT 284 (420)
Q Consensus 209 r~a~~~~~---~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~ 284 (420)
++++++++ +|.. +++ +.| +.|.|||+|+.+++..+ +.| ||.|++++|+
T Consensus 81 ~~~ia~~~~~~~g~~---~~~~~~v----------------------~~t~g~~~a~~~~~~~~--~~~-gd~Vl~~~p~ 132 (412)
T 2x5d_A 81 RRAISHWYRDRYDVQ---IDPESEA----------------------IVTIGSKEGLAHLMLAT--LDH-GDTILVPNPS 132 (412)
T ss_dssp HHHHHHHHHHHHCCC---CCTTTSE----------------------EEESCHHHHHHHHHHHH--CCT-TCEEEEEESC
T ss_pred HHHHHHHHHHHhCCC---CCCCcCE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCC
Confidence 99999998 3532 233 345 66999999999998765 457 8999999999
Q ss_pred CCCcHHHHhhcCcc------------------------------------------------------------------
Q psy16707 285 WGNHIPICKHTGLE------------------------------------------------------------------ 298 (420)
Q Consensus 285 w~ny~~i~~~aG~~------------------------------------------------------------------ 298 (420)
|+.|...++..|++
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 212 (412)
T 2x5d_A 133 YPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDL 212 (412)
T ss_dssp CHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred chhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEec
Confidence 99999888776653
Q ss_pred ----------------------------------------------------h---hhhhhccCCCchHHHHHHHHHhCC
Q psy16707 299 ----------------------------------------------------K---ILIRAFYSSPPIHGARIVQEILGD 323 (420)
Q Consensus 299 ----------------------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~d 323 (420)
. ........+++..++.++...|.+
T Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 292 (412)
T 2x5d_A 213 AYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG 292 (412)
T ss_dssp TTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS
T ss_pred cccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence 0 000111234455566655555543
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CH-HHHHHHHHhCCeEEeCC
Q psy16707 324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NA-TQVEKLIKEHSVYLTKD 395 (420)
Q Consensus 324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~-~~v~~Ll~e~~Vy~~p~ 395 (420)
. .+ .++.++++++++|+.+.+.|++.| |..+.++.|+|.|+.+ +. ++++.|++++||++.|+
T Consensus 293 ~---~~---~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 362 (412)
T 2x5d_A 293 D---QQ---CVRDIARQYQQRRDVLVKGLREAG----WMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPG 362 (412)
T ss_dssp C---SH---HHHHHHHHHHHHHHHHHHHHHHHT----CCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEG
T ss_pred C---HH---HHHHHHHHHHHHHHHHHHHHHHCC----CEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCc
Confidence 1 13 356667899999999999999886 6666777899998644 33 45678878899999874
Q ss_pred --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++. +.+.++...++|.+++
T Consensus 363 ~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l 395 (412)
T 2x5d_A 363 IGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMF 395 (412)
T ss_dssp GGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred hhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 2 999986 7777887777777654
No 34
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.67 E-value=1.7e-15 Score=151.13 Aligned_cols=233 Identities=17% Similarity=0.151 Sum_probs=170.8
Q ss_pred ccccCCChHHHHHHHHHccC--CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKKDT--NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~--~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
+..+.++++..+...+++.. +.+.|||+.|. ++ ++.++.|.+|......+ ....|.+..|.++|++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~la~~~ 91 (389)
T 1o4s_A 18 ISEIPISKTMELDAKAKALIKKGEDVINLTAGE---PD--FPTPEPVVEEAVRFLQK-GEVKYTDPRGIYELREGIAKRI 91 (389)
T ss_dssp HHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHTT-CCCCCCCTTCCHHHHHHHHHHH
T ss_pred HhhcCccHHHHHHHHHHHHHhcCCCEEEccCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHH
Confidence 66777888888877776543 56789999997 22 34567888887776643 3468998899999999999998
Q ss_pred c---CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707 217 Y---GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK 293 (420)
Q Consensus 217 ~---g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~ 293 (420)
. |.. ++++.| +.|.|||.|+.+++..+ +.| ||.|++++|+|+.|...++
T Consensus 92 ~~~~g~~---~~~~~v----------------------~~~~g~t~al~~~~~~l--~~~-gd~Vl~~~~~~~~~~~~~~ 143 (389)
T 1o4s_A 92 GERYKKD---ISPDQV----------------------VVTNGAKQALFNAFMAL--LDP-GDEVIVFSPVWVSYIPQII 143 (389)
T ss_dssp HHHHTCC---CCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHH
T ss_pred HHHhCCC---CCHHHE----------------------EEecCHHHHHHHHHHHh--CCC-CCEEEEcCCCchhHHHHHH
Confidence 3 532 234444 56999999999998765 457 8999999999999999888
Q ss_pred hcCcc---------------------------------------------------------------------------
Q psy16707 294 HTGLE--------------------------------------------------------------------------- 298 (420)
Q Consensus 294 ~aG~~--------------------------------------------------------------------------- 298 (420)
..|++
T Consensus 144 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g 223 (389)
T 1o4s_A 144 LAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD 223 (389)
T ss_dssp HTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS
T ss_pred HcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC
Confidence 77663
Q ss_pred ---------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707 299 ---------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTE 333 (420)
Q Consensus 299 ---------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e 333 (420)
.........++|..++.++...|.+.
T Consensus 224 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~--------- 294 (389)
T 1o4s_A 224 EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD--------- 294 (389)
T ss_dssp CCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC---------
T ss_pred CCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc---------
Confidence 01111222344555665555555431
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--CH-HHHHHHHHhCCeEEeCC------C--cEEEcc
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NA-TQVEKLIKEHSVYLTKD------G--RISMAG 402 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~~-~~v~~Ll~e~~Vy~~p~------g--Ris~ag 402 (420)
++.++++++++|+.+.+.|++.| |..+.++.|+|.|+.+ +. +.+++|++++||++.|+ + |||++.
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~ 370 (389)
T 1o4s_A 295 NSYMVQTFKERKNFVVERLKKMG----VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT 370 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC
Confidence 45667889999999999999886 5666677899988655 44 45577877999999875 2 999984
Q ss_pred cCCCCHHHHHHHHHHHh
Q psy16707 403 VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 l~~~ni~~la~AI~~vv 419 (420)
++++++...++|.+++
T Consensus 371 -~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 371 -SIERLTEALDRIEDFL 386 (389)
T ss_dssp -CHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 7788888888888765
No 35
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.67 E-value=4.7e-15 Score=146.17 Aligned_cols=241 Identities=14% Similarity=0.114 Sum_probs=172.3
Q ss_pred ccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
+..+..++++.+...+++. .+.+.|||+.|.. + +..++.|.+|......+ ....|.+..|.+++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~---~--~~~~~~v~~a~~~~~~~-~~~~y~~~~~~~~l~~~la~~~ 79 (370)
T 2z61_A 6 LLNFESFEVMDILALAQKLESEGKKVIHLEIGEP---D--FNTPKPIVDEGIKSLKE-GKTHYTDSRGILELREKISELY 79 (370)
T ss_dssp HHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSC---S--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHH
T ss_pred hhhccccHHHHHHHHHHHHHhcCCCEEEccCCCC---C--CCCCHHHHHHHHHHHHc-CccCCCCCCCCHHHHHHHHHHH
Confidence 5667778888877666543 3567899999972 2 33467777777666543 4578999999999999999998
Q ss_pred cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707 217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG 296 (420)
Q Consensus 217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG 296 (420)
-...+...+++.| +.|.|||.|+.+++..+ +.| ||.|++++|+|+.|...++..|
T Consensus 80 ~~~~g~~~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~~~~~~~~~~~g 134 (370)
T 2z61_A 80 KDKYKADIIPDNI----------------------IITGGSSLGLFFALSSI--IDD-GDEVLIQNPCYPCYKNFIRFLG 134 (370)
T ss_dssp HHHSSCCCCGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESSCCTHHHHHHHHTT
T ss_pred HHHhCCCCChhhE----------------------EECCChHHHHHHHHHHh--cCC-CCEEEEeCCCchhHHHHHHHcC
Confidence 3211112334545 67999999999998765 457 8999999999999998888877
Q ss_pred cc------------------------------------------------------------------------------
Q psy16707 297 LE------------------------------------------------------------------------------ 298 (420)
Q Consensus 297 ~~------------------------------------------------------------------------------ 298 (420)
++
T Consensus 135 ~~~~~v~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 214 (370)
T 2z61_A 135 AKPVFCDFTVESLEEALSDKTKAIIINSPSNPLGEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKT 214 (370)
T ss_dssp CEEEEECSSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSE
T ss_pred CEEEEeCCCHHHHHHhcccCceEEEEcCCCCCcCcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcE
Confidence 53
Q ss_pred ------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSL 348 (420)
Q Consensus 299 ------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l 348 (420)
.........+++..++.++...|.+. . .+.++.++++++++|+.+
T Consensus 215 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~-~~~~~~~~~~~~~~~~~l 289 (370)
T 2z61_A 215 ILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKE----T-EREINSMIKEFDRRRRLV 289 (370)
T ss_dssp EEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHH----H-HHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhcc----C-HHHHHHHHHHHHHHHHHH
Confidence 00011122244555555444434310 1 345667779999999999
Q ss_pred HHHHHhcCCCCCCcccCCCCceEEecCCC--H-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHH
Q psy16707 349 KDNLQKEGSNKPWNHITDQIGMFCYTGLN--A-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 349 ~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI 415 (420)
.+.|++.| |....++.|+|.|+.++ . +.+++|++++||++.|+ + ||+++ .++++++...++|
T Consensus 290 ~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l 364 (370)
T 2z61_A 290 LKYVKDFG----WEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERI 364 (370)
T ss_dssp HHHHHHTT----CBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHH
T ss_pred HHHHHHcC----CeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHH
Confidence 99999886 66667788999987663 4 45577877899999874 2 99999 7888899999998
Q ss_pred HHHhC
Q psy16707 416 HAVTK 420 (420)
Q Consensus 416 ~~vv~ 420 (420)
.++++
T Consensus 365 ~~~l~ 369 (370)
T 2z61_A 365 KEFLN 369 (370)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 88763
No 36
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.67 E-value=1.6e-15 Score=150.29 Aligned_cols=240 Identities=14% Similarity=0.141 Sum_probs=169.6
Q ss_pred chhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
++++ +..+..+++..+...+++. .+.+.|||+.|. ++ +..++.|.+|.....++ ....|.+..|.++++++
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~ 75 (388)
T 1j32_A 3 LAAR-VESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGE---PD--FNTPKHIVEAAKAALEQ-GKTRYGPAAGEPRLREA 75 (388)
T ss_dssp CCHH-HHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHH
T ss_pred hhhH-hHhCCccHHHHHHHHHHHHHhcCCCEEECCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHH
Confidence 3444 5666777776666555432 346789999997 32 34567788777766543 35679999999999999
Q ss_pred HHHHHc---CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 212 AAQLAY---GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 212 ~~~~~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+++++. |.+ ++++.| +.|.|||.|+.+++..+ +.| ||.|++++|+|+.|
T Consensus 76 la~~~~~~~g~~---~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~~~~~~~ 127 (388)
T 1j32_A 76 IAQKLQRDNGLC---YGADNI----------------------LVTNGGKQSIFNLMLAM--IEP-GDEVIIPAPFWVSY 127 (388)
T ss_dssp HHHHHHHHHCCC---CCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEESSCCTHH
T ss_pred HHHHHHHhcCCC---CChhhE----------------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCCChhH
Confidence 999984 432 234444 66999999999998765 457 89999999999999
Q ss_pred HHHHhhcCcc----------------------------------------------------------------------
Q psy16707 289 IPICKHTGLE---------------------------------------------------------------------- 298 (420)
Q Consensus 289 ~~i~~~aG~~---------------------------------------------------------------------- 298 (420)
...++..|++
T Consensus 128 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 207 (388)
T 1j32_A 128 PEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEK 207 (388)
T ss_dssp HHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred HHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 9888877654
Q ss_pred ----------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhh
Q psy16707 299 ----------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKL 326 (420)
Q Consensus 299 ----------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L 326 (420)
....+....++|..++.++...|...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-- 285 (388)
T 1j32_A 208 ILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-- 285 (388)
T ss_dssp CBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC--
T ss_pred cccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC--
Confidence 01112222344555665554445321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecC-----CCHH-HHHHHHHhCCeEEeCC----
Q psy16707 327 KAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTG-----LNAT-QVEKLIKEHSVYLTKD---- 395 (420)
Q Consensus 327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~-----l~~~-~v~~Ll~e~~Vy~~p~---- 395 (420)
. +.++.++++++++|+.+.+.|+++ | |..+.++.|+|.|.. .+.+ .++.|++++||++.|+
T Consensus 286 -~---~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 357 (388)
T 1j32_A 286 -Q---DCVQEMLAAFAERRRYMLDALNAMPG----LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG 357 (388)
T ss_dssp -S---HHHHHHHHHHHHHHHHHHHHHHTCTT----CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred -c---HHHHHHHHHHHHHHHHHHHHHhhCCC----CcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC
Confidence 2 335566789999999999999986 4 666677888888863 3444 4577877799999874
Q ss_pred --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ ||+++ .+.++++...++|.+++
T Consensus 358 ~~~~iRis~~-~~~~~i~~~~~~l~~~l 384 (388)
T 1j32_A 358 ADDCIRLSYA-TDLDTIKRGMERLEKFL 384 (388)
T ss_dssp CTTBEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEec-CCHHHHHHHHHHHHHHH
Confidence 2 99997 67888888888887764
No 37
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.66 E-value=4.1e-15 Score=150.13 Aligned_cols=216 Identities=14% Similarity=0.140 Sum_probs=158.0
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG 234 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~ 234 (420)
+.++|||++|. ++ .+.++.|.+|......+ ...+.|.|..|.++|++++++++... ..++++.|
T Consensus 55 ~~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~--~~~~~~~i----- 122 (432)
T 3ei9_A 55 DAQVISLGIGD---TT--EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG--LGIGDDDV----- 122 (432)
T ss_dssp TCCCEECSSCC---CC--SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTT--TTCCGGGE-----
T ss_pred CCCeEEccCCC---CC--CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHcc--CCCCcceE-----
Confidence 45899999995 33 46677777776665542 24468999999999999999998521 11234444
Q ss_pred cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc------------c----
Q psy16707 235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL------------E---- 298 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~------------~---- 298 (420)
+.|.|++.++.+...+ +.| ||.|++++|+|++|...++.+|. +
T Consensus 123 -----------------~~t~G~~~al~~l~~l---~~~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 181 (432)
T 3ei9_A 123 -----------------FVSDGAKCDISRLQVM---FGS-NVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYM 181 (432)
T ss_dssp -----------------EEESCHHHHHHHHHHH---HCT-TCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEE
T ss_pred -----------------EECCChHHHHHHHHHH---cCC-CCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEe
Confidence 6799999999875443 347 99999999999999988877662 1
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 182 ~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~ 261 (432)
T 3ei9_A 182 RCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261 (432)
T ss_dssp ECCGGGTTSCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGT
T ss_pred ccCcccCCcCChhhCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCe
Confidence
Q ss_pred ------------------------hhh---------------hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16707 299 ------------------------KIL---------------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMAD 339 (420)
Q Consensus 299 ------------------------~~~---------------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~ 339 (420)
..+ ....+++++..++.++..+|.+. -.++++.+++
T Consensus 262 ~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~ 336 (432)
T 3ei9_A 262 AMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPE-----GLEAMHKVIG 336 (432)
T ss_dssp EEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHH-----HHHHHHHHHH
T ss_pred EEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcc-----cHHHHHHHHH
Confidence 111 12345667788888777766532 1245667779
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC--------C--cEEEcccCC
Q psy16707 340 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD--------G--RISMAGVTS 405 (420)
Q Consensus 340 r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~ 405 (420)
+++++|+.+.+.|++.| |..+.++.|+|.|+.++ .++++.|++++||++.|+ + |||++ .+.
T Consensus 337 ~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~-~~~ 411 (432)
T 3ei9_A 337 FYKENTNIIIDTFTSLG----YDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF-GHR 411 (432)
T ss_dssp HHHHHHHHHHHHHHHTT----CCEEECSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-SCH
T ss_pred HHHHHHHHHHHHHHHCC----ceecCCCcceEEEEECCCCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec-CCH
Confidence 99999999999999987 67777788999997653 356788989999999874 2 99986 466
Q ss_pred CCHHHHHHHHHH
Q psy16707 406 KNVGYLAKAIHA 417 (420)
Q Consensus 406 ~ni~~la~AI~~ 417 (420)
++|+...+.|.+
T Consensus 412 e~l~~~l~rl~~ 423 (432)
T 3ei9_A 412 ENILEACRRFKQ 423 (432)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 677776666654
No 38
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.65 E-value=1.2e-14 Score=144.11 Aligned_cols=238 Identities=15% Similarity=0.105 Sum_probs=165.7
Q ss_pred CcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707 130 LPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209 (420)
Q Consensus 130 ~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr 209 (420)
+|+.++++ +..+..+.+..+.+..+. ++.|||+.|.+ + +..++.|.+|.....++ ....|.+..|.++|+
T Consensus 4 ~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~---~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~ 73 (386)
T 1u08_A 4 NPLIPQSK-LPQLGTTIFTQMSALAQQ---HQAINLSQGFP---D--FDGPRYLQERLAHHVAQ-GANQYAPMTGVQALR 73 (386)
T ss_dssp -CCCCCCS-CCCCCCCHHHHHHHHHHH---TTCEECCCSSC---S--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHH
T ss_pred CCCccchh-hhcCCccHHHHHHHHHhc---CCeEEecCCCC---C--CCCCHHHHHHHHHHHHh-hccCCCCCCCCHHHH
Confidence 45666666 777777666555544432 46899999972 2 34567888887776643 357899999999999
Q ss_pred HHHHHHH---cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCC
Q psy16707 210 KLAAQLA---YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTW 285 (420)
Q Consensus 210 ~a~~~~~---~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w 285 (420)
+++++++ +|.. ++++ .| +.|.|||.++.+++..+ +.| ||.|++++|+|
T Consensus 74 ~~la~~l~~~~g~~---~~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~ 125 (386)
T 1u08_A 74 EAIAQKTERLYGYQ---PDADSDI----------------------TVTAGATEALYAAITAL--VRN-GDEVICFDPSY 125 (386)
T ss_dssp HHHHHHHHHHHSCC---CCTTTTE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCC
T ss_pred HHHHHHHHHHhCCC---CCCCCCE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEeCCCc
Confidence 9999998 5643 2344 55 56999999999998765 457 89999999999
Q ss_pred CCcHHHHhhcCcc-------------------------------------------------------------------
Q psy16707 286 GNHIPICKHTGLE------------------------------------------------------------------- 298 (420)
Q Consensus 286 ~ny~~i~~~aG~~------------------------------------------------------------------- 298 (420)
+.|...++..|++
T Consensus 126 ~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 205 (386)
T 1u08_A 126 DSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVY 205 (386)
T ss_dssp TTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTT
T ss_pred hhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccc
Confidence 9999988877764
Q ss_pred --------------------------------------------------h---hhhhhccCCCchHHHHHHHHHhCChh
Q psy16707 299 --------------------------------------------------K---ILIRAFYSSPPIHGARIVQEILGDPK 325 (420)
Q Consensus 299 --------------------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~dp~ 325 (420)
. ...+....+++..++.++...|.+.
T Consensus 206 ~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~- 284 (386)
T 1u08_A 206 EHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE- 284 (386)
T ss_dssp TTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-
T ss_pred cccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC-
Confidence 0 0011112233445555555444321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------CHH-HHHHHHHhCCeEEeCC---
Q psy16707 326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NAT-QVEKLIKEHSVYLTKD--- 395 (420)
Q Consensus 326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~~~-~v~~Ll~e~~Vy~~p~--- 395 (420)
.+.++.++++++++|+.+.+.|++.| |....++.|+|.|+.+ +.+ .+++|++++||++.|+
T Consensus 285 -----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f 355 (386)
T 1u08_A 285 -----PEHYLALPDFYRQKRDILVNALNESR----LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVF 355 (386)
T ss_dssp -----THHHHTHHHHHHHHHHHHHHHTTSSS----CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGG
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHh
Confidence 23455677999999999999999876 6666778899998643 344 4477888999999763
Q ss_pred -------C--cEEEcccCCCCHHHHHHHHH
Q psy16707 396 -------G--RISMAGVTSKNVGYLAKAIH 416 (420)
Q Consensus 396 -------g--Ris~agl~~~ni~~la~AI~ 416 (420)
+ |||++ .++++|+.+.++|.
T Consensus 356 ~~~~~~~~~iRis~~-~~~~~i~~~~~~l~ 384 (386)
T 1u08_A 356 CADPFPHKLIRLCFA-KKESTLLAAAERLR 384 (386)
T ss_dssp CSSCCCSCEEEEECC-SCHHHHHHHHHHHT
T ss_pred CCCCCCCCEEEEEEc-CCHHHHHHHHHHHh
Confidence 1 99997 36666666666654
No 39
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.64 E-value=4.3e-15 Score=146.30 Aligned_cols=229 Identities=9% Similarity=0.026 Sum_probs=167.2
Q ss_pred cCCChHHHHHHHHHc-cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---c
Q psy16707 142 VKVPSSNLLTEAFKK-DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---Y 217 (420)
Q Consensus 142 ~~~d~i~~l~~~~~~-d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~ 217 (420)
+++++++.+.+.+++ +...+.|||+.|. + .+++++.|.+|...... ....|.+..|.+++|+++++++ +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~g~~i~l~~~~---~--~~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~ 76 (376)
T 3ezs_A 4 FEPYPFERLRALLKEITPKKRGLDLGIGE---P--QFETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRF 76 (376)
T ss_dssp CCCCHHHHHHHHHTTCCCSSCCCBCSSCC---C--CSCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHhhhccCCEEEeCCCC---C--CCCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 467788888877765 2233899999996 2 23466888888776542 4678999999999999999998 4
Q ss_pred CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC-CCEEEEcCCCCCCcHHHHhhcC
Q psy16707 218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG-EKVIYVPTPTWGNHIPICKHTG 296 (420)
Q Consensus 218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~-gd~VlvpdP~w~ny~~i~~~aG 296 (420)
|.. +++++| +.|.|||+++.+++..+.. |. ||+|++++|+|+.|...++..|
T Consensus 77 g~~---~~~~~i----------------------~~t~g~~~al~~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g 129 (376)
T 3ezs_A 77 KIE---LKENEL----------------------ISTLGSREVLFNFPSFVLF--DYQNPTIAYPNPFYQIYEGAAKFIK 129 (376)
T ss_dssp SCC---CCGGGE----------------------EEESSSHHHHHHHHHHHTT--TCSSCEEEEEESCCTHHHHHHHHTT
T ss_pred CCC---CCHHHE----------------------EECcCcHHHHHHHHHHHcC--CCCCCEEEEecCCcHhHHHHHHHcC
Confidence 542 234555 6699999999998876532 31 6999999999999999988887
Q ss_pred cc-----------------------------------------------------------------------------h
Q psy16707 297 LE-----------------------------------------------------------------------------K 299 (420)
Q Consensus 297 ~~-----------------------------------------------------------------------------~ 299 (420)
++ .
T Consensus 130 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 209 (376)
T 3ezs_A 130 AKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLL 209 (376)
T ss_dssp CEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHH
T ss_pred CEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHH
Confidence 64 0
Q ss_pred h---------------------------------------------hhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 300 I---------------------------------------------LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 300 ~---------------------------------------------~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
. .......+++..++.++...|.+ .+.+
T Consensus 210 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~~~ 282 (376)
T 3ezs_A 210 EACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLD-------DRHA 282 (376)
T ss_dssp HHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC-------SHHH
T ss_pred HccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC-------cHHH
Confidence 0 00111223455556555555543 1346
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCC----------C--cEEE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKD----------G--RISM 400 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~----------g--Ris~ 400 (420)
+.++++++++|+.+.+.|+ | |. .++.|+|.|+.++ .+.+++|++++||++.|+ + |||+
T Consensus 283 ~~~~~~~~~~~~~l~~~l~--~----~~--~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~ 354 (376)
T 3ezs_A 283 EFFRNIYANNLKLARKIFK--N----TL--IYPYSFYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLAL 354 (376)
T ss_dssp HHHHHHHHHHHHHHHHHST--T----CC--CCSBSSEEEEECSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhc--C----CC--CCCcceEEEEECCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEE
Confidence 7777999999999999887 4 54 6688999997764 455678877799999763 1 9999
Q ss_pred cccCCCCHHHHHHHHHHHhC
Q psy16707 401 AGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 401 agl~~~ni~~la~AI~~vv~ 420 (420)
++ +.++++.+.++|.++++
T Consensus 355 ~~-~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 355 VY-DTPLLEKPLEIIETYRE 373 (376)
T ss_dssp CS-CHHHHHHHHHHHHHHHC
T ss_pred cC-CHHHHHHHHHHHHHHHH
Confidence 85 88999999999998763
No 40
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.64 E-value=5e-15 Score=154.37 Aligned_cols=212 Identities=13% Similarity=0.156 Sum_probs=152.0
Q ss_pred CchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHHcCCCC-ccccCCceeeecccCCCCccccccccccceeec
Q psy16707 178 YVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLAYGEDC-PQLKDNLISIVQGISGTGSLRVGAAFQISIVQG 254 (420)
Q Consensus 178 ~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~~g~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt 254 (420)
.+...++++.+.+.... ....|.+..|.+++|+++++++...++ ...+++.| +.|
T Consensus 102 ~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i----------------------~~t 159 (498)
T 3ihj_A 102 FPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNI----------------------YLT 159 (498)
T ss_dssp SCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGE----------------------EEE
T ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccE----------------------EEc
Confidence 45666666655554322 346899999999999999999853221 22345555 669
Q ss_pred ccchHHHHHHHHHHHhcCCCCC----EEEEcCCCCCCcHHHHhhcCcc--------------------------------
Q psy16707 255 ISGTGSLRVGAAFLKNFFPGEK----VIYVPTPTWGNHIPICKHTGLE-------------------------------- 298 (420)
Q Consensus 255 ~gGtgal~~~~~~l~~~~p~gd----~VlvpdP~w~ny~~i~~~aG~~-------------------------------- 298 (420)
.|++.++.+++..+ +.+ || .|++|+|+|++|...++.+|++
T Consensus 160 ~G~~~ai~~~~~~l--~~~-gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 236 (498)
T 3ihj_A 160 TGASDGISTILKIL--VSG-GGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDP 236 (498)
T ss_dssp SSHHHHHHHHHHHH--CCC-CGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEE
T ss_pred CCHHHHHHHHHHHH--cCC-CCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCC
Confidence 99999999998766 346 54 9999999999999988887764
Q ss_pred -------------------------------------------------------hh-----------------------
Q psy16707 299 -------------------------------------------------------KI----------------------- 300 (420)
Q Consensus 299 -------------------------------------------------------~~----------------------- 300 (420)
..
T Consensus 237 k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK 316 (498)
T 3ihj_A 237 KVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSK 316 (498)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSS
T ss_pred eEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEecccc
Confidence 00
Q ss_pred ---------------------------hhhhccCCCchHHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 301 ---------------------------LIRAFYSSPPIHGARIVQEILGDPK----LKAQWLTEVKGMADRIISMRQSLK 349 (420)
Q Consensus 301 ---------------------------~~r~~~s~pp~~ga~iv~~IL~dp~----L~~~w~~el~~m~~r~~~~R~~l~ 349 (420)
..++.+++++..+|.++..++++|+ ...+|.++++.++++++++|+.+.
T Consensus 317 ~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~ 396 (498)
T 3ihj_A 317 GYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTE 396 (498)
T ss_dssp STTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012334667788888887787642 445788899999999999999999
Q ss_pred HHHHhc-CCCCCCcccCCCCceEEec---------------CCCHHH--HHHHHHhCCeEEeCC-------C----cEEE
Q psy16707 350 DNLQKE-GSNKPWNHITDQIGMFCYT---------------GLNATQ--VEKLIKEHSVYLTKD-------G----RISM 400 (420)
Q Consensus 350 ~~L~~~-g~~~~w~~i~~q~GmF~~~---------------~l~~~~--v~~Ll~e~~Vy~~p~-------g----Ris~ 400 (420)
+.|+++ | |....+++|||.|. |++.+. +.+|++++||++.|+ | ||++
T Consensus 397 ~~L~~~~g----~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~ 472 (498)
T 3ihj_A 397 DLFNQVPG----IHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI 472 (498)
T ss_dssp HHHHTSTT----EECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC
T ss_pred HHHhcCCC----cEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe
Confidence 999986 4 77788899999995 233333 678889999999873 2 9999
Q ss_pred cccCCCCHHHHHHHHHHHh
Q psy16707 401 AGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 401 agl~~~ni~~la~AI~~vv 419 (420)
+ .+.++++.+.++|.+++
T Consensus 473 ~-~~~e~l~~~i~~L~~~~ 490 (498)
T 3ihj_A 473 L-PPVEKLKTVLQKVKDFH 490 (498)
T ss_dssp C-SCHHHHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHHHHH
Confidence 6 77788888888887764
No 41
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.63 E-value=1.4e-15 Score=151.21 Aligned_cols=236 Identities=14% Similarity=0.117 Sum_probs=163.7
Q ss_pred chhhhcccc--CCChHHHHHHHH---Hcc-CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCC---CCCCCCCCC
Q psy16707 134 FQDARTSSV--KVPSSNLLTEAF---KKD-TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL---DKEYAPIIG 204 (420)
Q Consensus 134 ~~~~~~~~~--~~d~i~~l~~~~---~~d-~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~---~~~Y~p~~G 204 (420)
++++ ...+ ..+.+..+.+.. .+. ...+.|||+.|. ++. ++++.|++|......+.. .+.|.|..|
T Consensus 4 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~~--~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g 77 (398)
T 3ele_A 4 VNES-MYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGN---PSI--PAPQIVNDTIKELVTDYDSVALHGYTSAQG 77 (398)
T ss_dssp SCHH-HHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCC---CCS--CCCHHHHHHHHHHHHHSCHHHHHSCCCTTC
T ss_pred hhHH-HhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCC---CCC--CCCHHHHHHHHHHHhcCCccccCCcCCCCC
Confidence 4444 4444 355555554333 222 235789999994 544 467788888777664421 578999999
Q ss_pred CHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC-CEEEE
Q psy16707 205 APDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-KVIYV 280 (420)
Q Consensus 205 ~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-d~Vlv 280 (420)
.++||+++++++ +|.. +++++| +.|.|||+|+.+++..+ +.| | |+|++
T Consensus 78 ~~~lr~~la~~l~~~~g~~---~~~~~i----------------------~~~~g~~~al~~~~~~l--~~~-g~d~vl~ 129 (398)
T 3ele_A 78 DVETRAAIAEFLNNTHGTH---FNADNL----------------------YMTMGAAASLSICFRAL--TSD-AYDEFIT 129 (398)
T ss_dssp CHHHHHHHHHHHHHHHCCC---CCGGGE----------------------EEESSHHHHHHHHHHHH--CCS-TTCEEEE
T ss_pred cHHHHHHHHHHHHHHhCCC---CChHHE----------------------EEccCHHHHHHHHHHHH--cCC-CCCEEEE
Confidence 999999999998 4432 334555 66999999999998765 457 9 99999
Q ss_pred cCCCCCCcHHHHhhcCcc--------------------------------------------------------------
Q psy16707 281 PTPTWGNHIPICKHTGLE-------------------------------------------------------------- 298 (420)
Q Consensus 281 pdP~w~ny~~i~~~aG~~-------------------------------------------------------------- 298 (420)
++|+|+.|...++..|++
T Consensus 130 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~ 209 (398)
T 3ele_A 130 IAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIG 209 (398)
T ss_dssp ESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccC
Confidence 999999999998888764
Q ss_pred ------------------------------------------------------hh------h-------hhh-ccCCCc
Q psy16707 299 ------------------------------------------------------KI------L-------IRA-FYSSPP 310 (420)
Q Consensus 299 ------------------------------------------------------~~------~-------~r~-~~s~pp 310 (420)
.. + .+. .+.++|
T Consensus 210 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (398)
T 3ele_A 210 RPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAP 289 (398)
T ss_dssp SCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCC
Confidence 00 0 000 123334
Q ss_pred hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHHHHHHHh
Q psy16707 311 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKE 387 (420)
Q Consensus 311 ~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e 387 (420)
...+.++..+|.+.. ++++++++|+.+.+.|+++| |..+.++.|+|.|+.+ +.+.+...+.+
T Consensus 290 ~~~~~a~~~~l~~~~-----------~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (398)
T 3ele_A 290 SLFQKMIVKCQGATG-----------DINAYKENRDLLYEGLTRIG----YHCFKPDGAFYMFVKALEDDSNAFCEKAKE 354 (398)
T ss_dssp HHHHHHHTTCTTCCC-----------CHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHcC----CeecCCCeeEEEEEEcCCCCHHHHHHHHHH
Confidence 444443333333221 34678899999999999887 6777888999898754 34444444578
Q ss_pred CCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 388 HSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 388 ~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv 419 (420)
+||++.|+. |||++ .+.++|+++.++|.+++
T Consensus 355 ~gi~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l 393 (398)
T 3ele_A 355 EDVLIVAADGFGCPGWVRISYC-VDREMIKHSMPAFEKIY 393 (398)
T ss_dssp TTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred CCEEEeCccccCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence 999998852 99997 78899999999988875
No 42
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.62 E-value=1.9e-14 Score=144.23 Aligned_cols=236 Identities=13% Similarity=0.122 Sum_probs=165.9
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAA 213 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~ 213 (420)
++++ +..++.+++..+.+..+ .++.|||+.|. ++ +..++.|.+|.....++ ....|.+..|.++|+++++
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~~~---~~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la 72 (411)
T 2o0r_A 3 TVSR-LRPYATTVFAEMSALAT---RIGAVNLGQGF---PD--EDGPPKMLQAAQDAIAG-GVNQYPPGPGSAPLRRAIA 72 (411)
T ss_dssp CCGG-GGGGSSCHHHHHHHHHH---TTTCEESSCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHH
T ss_pred hhhH-hHhcCccHHHHHHHHhh---cCCeeeccCcC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHH
Confidence 4555 66777776665554443 24689999996 32 33567788777776653 3578999999999999999
Q ss_pred HHH---cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 214 QLA---YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 214 ~~~---~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
+++ +|.. ++++ .| +.|.|||+|+.+++..+ +.| ||+|++++|+|+.|.
T Consensus 73 ~~~~~~~g~~---~~~~~~v----------------------~~t~g~~~al~~~~~~~--~~~-gd~Vl~~~~~y~~~~ 124 (411)
T 2o0r_A 73 AQRRRHFGVD---YDPETEV----------------------LVTVGATEAIAAAVLGL--VEP-GSEVLLIEPFYDSYS 124 (411)
T ss_dssp HHHHHHHCCC---CCTTTSE----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHH
T ss_pred HHHHHHcCCC---CCCCceE----------------------EEeCCHHHHHHHHHHHh--cCC-CCEEEEeCCCcHhHH
Confidence 998 3543 2333 45 56999999999998755 457 899999999999999
Q ss_pred HHHhhcCcc-----------------------------------------------------------------------
Q psy16707 290 PICKHTGLE----------------------------------------------------------------------- 298 (420)
Q Consensus 290 ~i~~~aG~~----------------------------------------------------------------------- 298 (420)
..++..|++
T Consensus 125 ~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 204 (411)
T 2o0r_A 125 PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEH 204 (411)
T ss_dssp HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 888776643
Q ss_pred ------------------------------------------------h---hhhhh-ccCCCchHHHHHHHHHhCChhh
Q psy16707 299 ------------------------------------------------K---ILIRA-FYSSPPIHGARIVQEILGDPKL 326 (420)
Q Consensus 299 ------------------------------------------------~---~~~r~-~~s~pp~~ga~iv~~IL~dp~L 326 (420)
. ..... .++ ++...+.++...|.+.
T Consensus 205 ~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~a~~~~l~~~-- 281 (411)
T 2o0r_A 205 LVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYV-GGAPFQPAVALALDTE-- 281 (411)
T ss_dssp CBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTSC-CCTTHHHHHHHHHHHC--
T ss_pred cccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccCC-CChHHHHHHHHHHhCC--
Confidence 0 01111 232 3344454444444211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCC----
Q psy16707 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKD---- 395 (420)
Q Consensus 327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~---- 395 (420)
.+.++.++++++++|+.+.+.|++.| |....++.|+|.|+.+ +. +.+++|++++||++.|+
T Consensus 282 ----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~ 353 (411)
T 2o0r_A 282 ----DAWVAALRNSLRARRDRLAAGLTEIG----FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFC 353 (411)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHT----CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGS
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHcC----CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhC
Confidence 23456677999999999999999886 6767778899988643 33 45577888899999652
Q ss_pred -------------C----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 -------------G----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -------------g----Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++ .++++++.+.++|.+++
T Consensus 354 ~~~~~~~~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~~ 393 (411)
T 2o0r_A 354 DPAAGQASQQADVWNHLVRFTFC-KRDDTLDEAIRRLSVLA 393 (411)
T ss_dssp CCC--------CCGGGCEEEECC-SCHHHHHHHHHHHGGGG
T ss_pred CCccccccccccCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence 2 99997 47778888888887764
No 43
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.62 E-value=3.5e-14 Score=141.46 Aligned_cols=247 Identities=17% Similarity=0.199 Sum_probs=171.5
Q ss_pred chhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFG 209 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr 209 (420)
++++ +..+.+.++..+.+..++ .++.+.|||+.|. ++....+.+.|.+|.....++. ... |.+..|.++++
T Consensus 7 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~---~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~ 81 (407)
T 2zc0_A 7 LAGR-ANWIKGSALADVMKKASELQKKGVKLISLAAGD---PDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELR 81 (407)
T ss_dssp SCGG-GGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCC---CCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHH
T ss_pred hhhh-hccCCchHHHHHHHhhhcccCCCCceEeCCCCC---CCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHH
Confidence 4455 666777777766665542 2334789999997 3332346778888776665432 235 99999999999
Q ss_pred HHHHHHH---cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707 210 KLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG 286 (420)
Q Consensus 210 ~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ 286 (420)
+++++++ +|.+ .+++.| +.|.|||.|+.+++..+ +.| ||.|++++|+|+
T Consensus 82 ~~la~~~~~~~g~~---~~~~~v----------------------~~t~g~t~a~~~~~~~~--~~~-gd~vl~~~p~~~ 133 (407)
T 2zc0_A 82 EELAAFLKKYDHLE---VSPENI----------------------VITIGGTGALDLLGRVL--IDP-GDVVITENPSYI 133 (407)
T ss_dssp HHHHHHHHHHSCCC---CCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCH
T ss_pred HHHHHHHHHhcCCC---CCcceE----------------------EEecCHHHHHHHHHHHh--cCC-CCEEEEeCCChH
Confidence 9999998 4532 234444 56999999999998766 457 899999999999
Q ss_pred CcHHHHhhcCcc--------------------------------------------------------------------
Q psy16707 287 NHIPICKHTGLE-------------------------------------------------------------------- 298 (420)
Q Consensus 287 ny~~i~~~aG~~-------------------------------------------------------------------- 298 (420)
.|...++..|++
T Consensus 134 ~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 134 NTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp HHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 887665544431
Q ss_pred ----------------------------------------------------hhh---hhhccCCCchHHHHHHHHHhCC
Q psy16707 299 ----------------------------------------------------KIL---IRAFYSSPPIHGARIVQEILGD 323 (420)
Q Consensus 299 ----------------------------------------------------~~~---~r~~~s~pp~~ga~iv~~IL~d 323 (420)
..+ ......+++...+.++...|.+
T Consensus 214 De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 293 (407)
T 2zc0_A 214 DTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKR 293 (407)
T ss_dssp ECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHT
T ss_pred ECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHc
Confidence 000 0111123355666666665643
Q ss_pred hhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--
Q psy16707 324 PKLKAQWL-TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD-- 395 (420)
Q Consensus 324 p~L~~~w~-~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~-- 395 (420)
. .|. +.++.++++++++|+.+.+.|++.. ++ |..+.++.|+|.|+.+ +. +.++.|++++||++.|+
T Consensus 294 ~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~ 367 (407)
T 2zc0_A 294 G----YFEKYHLEGALLGYKEKRDIMLKALENHL-PN-AEFTKPIAGMFVMFFLPEGADGISFANELMEREGVVVVPGKP 367 (407)
T ss_dssp T----HHHHHTTTTHHHHHHHHHHHHHHHHHHHC-TT-SCBCCCSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGG
T ss_pred C----CchHHHHHHHHHHHHHHHHHHHHHHHHhC-CC-CEEecCCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchh
Confidence 2 344 5577778999999999999998752 11 5656677899998654 33 45578877779999874
Q ss_pred --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++..+.++++.+.++|.+++
T Consensus 368 ~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l 401 (407)
T 2zc0_A 368 FYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLY 401 (407)
T ss_dssp GCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHH
T ss_pred ccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 2 99998778899999999988765
No 44
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.61 E-value=4.5e-15 Score=149.35 Aligned_cols=237 Identities=12% Similarity=0.099 Sum_probs=164.5
Q ss_pred HHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccC
Q psy16707 147 SNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKD 226 (420)
Q Consensus 147 i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~ 226 (420)
++.....+..+.+++.|||+.|. + ..++++.|.+|......+.....|.+..|.+++|+++++++....+..+++
T Consensus 31 ~~~~~~~~~~~~g~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~ 105 (437)
T 3g0t_A 31 LVALVTNLEKATGTKFCRMEMGV---P--GLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPA 105 (437)
T ss_dssp HHHHHHHHHHHHTCCCEECCCCS---C--CSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCG
T ss_pred HHHHHHHHHHhcCCCEEeccCcC---C--CCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCc
Confidence 44444445455678899999997 2 245678888877776653223889999999999999999985322222344
Q ss_pred CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC--EEEEcCCCCCCcHHHHhhcCcc------
Q psy16707 227 NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK--VIYVPTPTWGNHIPICKHTGLE------ 298 (420)
Q Consensus 227 ~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd--~VlvpdP~w~ny~~i~~~aG~~------ 298 (420)
+.| +.|.|||+++.+++..+..+.| || +|++++|+|+.|...++..|++
T Consensus 106 ~~i----------------------~~t~g~t~al~~~~~~l~~~~~-gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~ 162 (437)
T 3g0t_A 106 RAC----------------------VPTVGSMQGCFVSFLVANRTHK-NREYGTLFIDPGFNLNKLQCRILGQKFESFDL 162 (437)
T ss_dssp GGE----------------------EEESHHHHHHHHHHHHHTTSCT-TCSCCEEEEESCCHHHHHHHHHHTCCCEEEEG
T ss_pred ccE----------------------EEeCCHHHHHHHHHHHHhcCCC-CCccEEEEeCCCcHhHHHHHHHcCCEEEEEee
Confidence 545 6699999999999876531157 89 9999999999999888877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 163 ~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (437)
T 3g0t_A 163 FEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQ 242 (437)
T ss_dssp GGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCC
T ss_pred cCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchh
Confidence
Q ss_pred -------------------------------------h-h-----------------hh---hhccCCCchHHHHHHHHH
Q psy16707 299 -------------------------------------K-I-----------------LI---RAFYSSPPIHGARIVQEI 320 (420)
Q Consensus 299 -------------------------------------~-~-----------------~~---r~~~s~pp~~ga~iv~~I 320 (420)
. . +. +....+++..++.++...
T Consensus 243 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 322 (437)
T 3g0t_A 243 PSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAM 322 (437)
T ss_dssp CCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHH
T ss_pred hccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHH
Confidence 0 0 00 000122333333333333
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-------CCCCceEEecC---CCHHH-HHHHHHhCC
Q psy16707 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-------TDQIGMFCYTG---LNATQ-VEKLIKEHS 389 (420)
Q Consensus 321 L~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i-------~~q~GmF~~~~---l~~~~-v~~Ll~e~~ 389 (420)
|.+. .+|.++++.++++++++|+.+.+.|+++| |... +++.|+|.|+. .+.+. +++|+ ++|
T Consensus 323 l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~g 394 (437)
T 3g0t_A 323 LKAC---NDGEYNFRDSVIEYGRKARIMKKMFLDNG----FNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFV-RYG 394 (437)
T ss_dssp HHHH---HTTSCCHHHHHHHHHHHHHHHHHHHHTTT----EEESSCEETTEECCSSSEEEEEETTCCHHHHHHHHH-HTT
T ss_pred HhCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHcC----CEEeccccCCCCCceeEEEEEecCCCCHHHHHHHHH-HcC
Confidence 3210 12322277888999999999999999886 5655 33889999864 34544 46664 679
Q ss_pred eEEeCCC----------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 390 VYLTKDG----------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 390 Vy~~p~g----------Ris~agl~~~ni~~la~AI~~vv 419 (420)
|++.|+. |||++..+.++++++.++|.+++
T Consensus 395 i~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~ 434 (437)
T 3g0t_A 395 MCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLN 434 (437)
T ss_dssp EECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHH
T ss_pred eEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 9998752 99999889999999999999875
No 45
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.61 E-value=1.6e-15 Score=154.96 Aligned_cols=228 Identities=10% Similarity=0.000 Sum_probs=164.1
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCC--CCCCC-C---CHHHHHHHHHHHcCCCCccccCCceeeec
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKE--YAPII-G---APDFGKLAAQLAYGEDCPQLKDNLISIVQ 233 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~--Y~p~~-G---~~~fr~a~~~~~~g~~~~~~~~~~i~~~~ 233 (420)
..+|||++|. ++ +++++.|+++..........+. |.+.. | .++||+++++++.......+++++|
T Consensus 56 ~~~i~l~~g~---~~--~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~i---- 126 (427)
T 2hox_A 56 GCSADVASGD---GL--FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYI---- 126 (427)
T ss_dssp TCCEECCSCC---CG--GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEE----
T ss_pred CceEEecCcC---CC--CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEE----
Confidence 4689999996 33 4566777777665542223344 99998 9 9999999999985333222345555
Q ss_pred ccCCCCccccccccccceeecccchHHHHHHHHHHHh------cCCCCCEEEEcCCCCCCcHHHHhhcCcc---------
Q psy16707 234 GISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN------FFPGEKVIYVPTPTWGNHIPICKHTGLE--------- 298 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~------~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------- 298 (420)
+.|.|+++++.+++..|.. +.| ||.|++++|+|+.|...++..|++
T Consensus 127 ------------------v~t~G~~~al~~~~~~l~~~~~~~~~~~-Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~ 187 (427)
T 2hox_A 127 ------------------VFGVGVTQLIHGLVISLSPNMTATPDAP-ESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAA 187 (427)
T ss_dssp ------------------EEESHHHHHHHHHHHHHSCCTTTCTTSC-CEEEEECSSCCHHHHHHHHHSCBTTEEEEEEGG
T ss_pred ------------------EEeCCHHHHHHHHHHHHhhccccccCCC-CCEEEEeCCCcccHHHHHHHcCCeeeeecCCHH
Confidence 6799999999999876611 457 999999999999999999887764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 188 ~l~~~~~~~~k~v~l~~p~NPtG~~~~~~l~~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~ 267 (427)
T 2hox_A 188 NYVNVSNPEQYIEMVTSPNNPEGLLRHAVIKGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKD 267 (427)
T ss_dssp GGTTCSCGGGEEEEEESSCTTTCCCCCCSSTTCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECC
T ss_pred HHHHhhcCCceEEEEcCCCCCcccccHHHHcCCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEEEEEECC
Confidence
Q ss_pred -------hhhhhhccCCCchHHHHHHHHHhCChhhHHH--------HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC----
Q psy16707 299 -------KILIRAFYSSPPIHGARIVQEILGDPKLKAQ--------WLTEVKGMADRIISMRQSLKDNLQKE-GSN---- 358 (420)
Q Consensus 299 -------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~--------w~~el~~m~~r~~~~R~~l~~~L~~~-g~~---- 358 (420)
.........+++...|.++..+|.+. .+ |.+.++.++++++++|+.|.+.|++. |..
T Consensus 268 ~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 344 (427)
T 2hox_A 268 ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEV---VAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQEL 344 (427)
T ss_dssp HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHH---HHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcc---hhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcccccc
Confidence 11112233567778888777767542 22 34567788899999999999999986 421
Q ss_pred ---C---CCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 359 ---K---PWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 359 ---~---~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
. .|....++.|+|.|+.++ .++++.|++++||++.|+ + |||++. +.++++...+.|.+++
T Consensus 345 ~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 345 PQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMV 422 (427)
T ss_dssp CSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 1 034456778999998764 356788888999999874 2 999985 6667777777777665
No 46
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.60 E-value=2.6e-14 Score=141.40 Aligned_cols=235 Identities=19% Similarity=0.157 Sum_probs=165.9
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAA 213 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~ 213 (420)
++++ +..+...++..+.+..+. ++.|||+.|. + .++.++.|.++......+ ...|.+..|.++|+++++
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~~~~---~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la 71 (381)
T 1v2d_A 3 LHPR-TEAAKESIFPRMSGLAQR---LGAVNLGQGF---P--SNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALA 71 (381)
T ss_dssp CCGG-GGGC---CHHHHHHHHHH---HTCEECCCCS---C--SSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHH
T ss_pred hhhh-hhhcCccHHHHHHHHHhc---CCeEEecCCC---C--CCCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHH
Confidence 4454 666666666666655543 4689999996 2 234667888887776643 457999889999999999
Q ss_pred HHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707 214 QLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK 293 (420)
Q Consensus 214 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~ 293 (420)
+++ +.+ ++.| +.|.|||.|+.+++..+ +.| ||+|++++|+|+.|...++
T Consensus 72 ~~~-~~~-----~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~Vl~~~~~~~~~~~~~~ 120 (381)
T 1v2d_A 72 EEF-AVE-----PESV----------------------VVTSGATEALYVLLQSL--VGP-GDEVVVLEPFFDVYLPDAF 120 (381)
T ss_dssp HHH-TSC-----GGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHH
T ss_pred Hhc-CCC-----hhhE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCchhHHHHHH
Confidence 984 432 3344 67999999999998765 457 8999999999999998877
Q ss_pred hcCcc---------------------------------------------------------------------------
Q psy16707 294 HTGLE--------------------------------------------------------------------------- 298 (420)
Q Consensus 294 ~aG~~--------------------------------------------------------------------------- 298 (420)
..|++
T Consensus 121 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g 200 (381)
T 1v2d_A 121 LAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYG 200 (381)
T ss_dssp HTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS
T ss_pred HcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccC
Confidence 66532
Q ss_pred -----------------------------------------h---hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707 299 -----------------------------------------K---ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV 334 (420)
Q Consensus 299 -----------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el 334 (420)
. ........+++...+.++...|.. ..+.+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~ 276 (381)
T 1v2d_A 201 ERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKL----ARREGFY 276 (381)
T ss_dssp SCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHH----HHHTTHH
T ss_pred CCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC----cccHHHH
Confidence 0 001112234455566555554431 1223456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC----------C--cEEEcc
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD----------G--RISMAG 402 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~----------g--Ris~ag 402 (420)
+.++++++++|+.+.+.|++.| |..+.++.|+|.|+.++...+..+++++||++.|+ + ||+++.
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~ 352 (381)
T 1v2d_A 277 EALREGYRRRRDLLAGGLRAMG----LRVYVPEGTYFLMAELPGWDAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK 352 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT----CCEECCSBSSEEEEECTTCCHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCC----CEecCCCcceEEEEecChHhHHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC
Confidence 6777999999999999999976 66677778999987554212777788999999763 2 999987
Q ss_pred cCCCCHHHHHHHHHHHh
Q psy16707 403 VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 l~~~ni~~la~AI~~vv 419 (420)
+.++++.+.++|.+++
T Consensus 353 -~~~~i~~~~~~l~~~l 368 (381)
T 1v2d_A 353 -TEEELHLALERLGRVV 368 (381)
T ss_dssp -CHHHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 8888999999988875
No 47
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.60 E-value=7.7e-16 Score=155.74 Aligned_cols=251 Identities=12% Similarity=0.159 Sum_probs=170.7
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHH----------HHHHHccCCCCCCCCCC
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQA----------DEIVLNKNLDKEYAPII 203 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a----------~~~~~~~~~~~~Y~p~~ 203 (420)
+|++ +..+.++++..+.+.+.+. .++.|||+.|. ||..+++.....++ ..... ....|.|..
T Consensus 7 ~s~~-~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~---p~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~~~ 78 (425)
T 2r2n_A 7 ITAA-SAARNPSPIRTMTDILSRG-PKSMISLAGGL---PNPNMFPFKTAVITVENGKTIQFGEEMMK---RALQYSPSA 78 (425)
T ss_dssp SCHH-HHTCCCCSGGGHHHHHHHS-CTTCEECCCCC---CCGGGCSEEEEEEEETTSCCEEECHHHHH---HHTSCCCTT
T ss_pred HHHH-HhcCCCchHHHHHHHhhcC-CCCeEEcCCcC---CCchhCCHHHHHHHHhhcccccccccchh---hhcCCCCCC
Confidence 5565 7788889998888877653 35789999997 55433332211110 00011 135799999
Q ss_pred CCHHHHHHHHHHH---cCCCCcccc----CCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC
Q psy16707 204 GAPDFGKLAAQLA---YGEDCPQLK----DNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK 276 (420)
Q Consensus 204 G~~~fr~a~~~~~---~g~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd 276 (420)
|.++||+++++++ +|.+...++ ++.| +.|.|+++++.+++..+ +.| ||
T Consensus 79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd 133 (425)
T 2r2n_A 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDL----------------------CVTSGSQQGLCKVFEMI--INP-GD 133 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEE----------------------EEESSHHHHHHHHHHHH--CCT-TC
T ss_pred CCHHHHHHHHHHHHHhcCCCCccccccCCcCcE----------------------EEeCcHHHHHHHHHHHh--CCC-CC
Confidence 9999999999998 454310000 1333 67999999999998766 457 99
Q ss_pred EEEEcCCCCCCcHHHHhhcCc-------------------------------------c---------------------
Q psy16707 277 VIYVPTPTWGNHIPICKHTGL-------------------------------------E--------------------- 298 (420)
Q Consensus 277 ~VlvpdP~w~ny~~i~~~aG~-------------------------------------~--------------------- 298 (420)
+|++++|+|+.|...++.+|+ +
T Consensus 134 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l 213 (425)
T 2r2n_A 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERK 213 (425)
T ss_dssp EEEEESSCCHHHHHHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHH
T ss_pred EEEEeCCCcHHHHHHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHH
Confidence 999999999998866544321 1
Q ss_pred -----------------------------------------------------------------------hhhhhhccC
Q psy16707 299 -----------------------------------------------------------------------KILIRAFYS 307 (420)
Q Consensus 299 -----------------------------------------------------------------------~~~~r~~~s 307 (420)
.........
T Consensus 214 ~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~~~~~~~~~ 293 (425)
T 2r2n_A 214 KEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTL 293 (425)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHHHHHHHhcC
Confidence 111122234
Q ss_pred CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHH
Q psy16707 308 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVE 382 (420)
Q Consensus 308 ~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~ 382 (420)
+++..++.++...|++. ..+.|.++++.++++++++|+.+.+.|++.- ++-+....++.|+|.|+.++ .+++.
T Consensus 294 ~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~ 371 (425)
T 2r2n_A 294 HPSTFNQLMISQLLHEW-GEEGFMAHVDRVIDFYSNQKDAILAAADKWL-TGLAEWHVPAAGMFLWIKVKGINDVKELIE 371 (425)
T ss_dssp SSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEECCCSBSSEEEEEETTCSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEeCCCceEEEEEEeCCCCCHHHHHH
Confidence 56777887777666431 1134667888999999999999999998751 11123456788999986432 34455
Q ss_pred HHHHhCCeEEeCC-----------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 383 KLIKEHSVYLTKD-----------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 383 ~Ll~e~~Vy~~p~-----------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
.++.++||++.|+ + |||++..+.+.++.+.++|.+++
T Consensus 372 ~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l 421 (425)
T 2r2n_A 372 EKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLI 421 (425)
T ss_dssp THHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 5557999999863 2 99998778899999999988775
No 48
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.60 E-value=3.7e-14 Score=142.25 Aligned_cols=241 Identities=12% Similarity=0.090 Sum_probs=172.4
Q ss_pred chhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
|+++ +..++++++..+.+.+++. .+.+.|||+.|.+ + ++.++.|.+|. ....+ ....|.+..|.++++++
T Consensus 16 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~---~--~~~~~~v~~a~-~~l~~-~~~~y~~~~g~~~l~~~ 87 (409)
T 2gb3_A 16 FSDR-VLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQP---D--LKTPEVFFERI-YENKP-EVVYYSHSAGIWELREA 87 (409)
T ss_dssp CCHH-HHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCC---C--SCCCTHHHHHH-HHTCC-SSCCCCCTTCCHHHHHH
T ss_pred HHHH-hhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCC---C--CCCCHHHHHHH-HHHhc-CCCCCCCCCCcHHHHHH
Confidence 6777 7888888887776665443 3467899999973 2 33557777777 65543 35689999999999999
Q ss_pred HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+++++....+..++++.| +.|.|||.|+.+++..+ +.| ||.|++++|+|+.|...
T Consensus 88 la~~~~~~~g~~~~~~~v----------------------~~~~g~t~a~~~~~~~~--~~~-gd~Vl~~~~~~~~~~~~ 142 (409)
T 2gb3_A 88 FASYYKRRQRVDVKPENV----------------------LVTNGGSEAILFSFAVI--ANP-GDEILVLEPFYANYNAF 142 (409)
T ss_dssp HHHHHHHTSCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHH
T ss_pred HHHHHHHHhCCCCCHHHE----------------------EEeCCHHHHHHHHHHHh--CCC-CCEEEEcCCCchhHHHH
Confidence 999984322222334444 67999999999998765 457 89999999999999877
Q ss_pred HhhcCcc-------------------------------------------------------------------------
Q psy16707 292 CKHTGLE------------------------------------------------------------------------- 298 (420)
Q Consensus 292 ~~~aG~~------------------------------------------------------------------------- 298 (420)
++..|++
T Consensus 143 ~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~ 222 (409)
T 2gb3_A 143 AKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFR 222 (409)
T ss_dssp HHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS
T ss_pred HHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccC
Confidence 7654431
Q ss_pred -------------------------------------h-hhh-------hhccCCCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707 299 -------------------------------------K-ILI-------RAFYSSPPIHGARIVQEILGDPKLKAQWLTE 333 (420)
Q Consensus 299 -------------------------------------~-~~~-------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e 333 (420)
. .+. +... +++..++.++...|... . +.
T Consensus 223 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~---~---~~ 295 (409)
T 2gb3_A 223 GEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLD---D---SF 295 (409)
T ss_dssp SCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCC---H---HH
T ss_pred CCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhcc---H---HH
Confidence 1 111 1112 55666666666656431 2 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-cCCCCceEEecCC---CH-HHHHHHHHh-----CCeEEeCC--------
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTGL---NA-TQVEKLIKE-----HSVYLTKD-------- 395 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~~l---~~-~~v~~Ll~e-----~~Vy~~p~-------- 395 (420)
++.++++++++|+.+.+.|++.| |.. ..++.|+|.|+.+ +. +.+++|+++ +||++.|+
T Consensus 296 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~ 371 (409)
T 2gb3_A 296 FDFVRETYRERVETVLKKLEEHG----LKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPG 371 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----ceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCC
Confidence 56667899999999999999886 565 5677899998644 44 455778777 69999763
Q ss_pred ---C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 ---G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ---g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ ||+++ .+.++++++.++|.+++
T Consensus 372 ~~~~~iRis~~-~~~e~i~~~~~~l~~~l 399 (409)
T 2gb3_A 372 LGKKEIRIACV-LEKDLLSRAIDVLMEGL 399 (409)
T ss_dssp TTSSEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeC-CCHHHHHHHHHHHHHHH
Confidence 2 99998 88888999999988765
No 49
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.59 E-value=1.4e-15 Score=160.02 Aligned_cols=221 Identities=12% Similarity=0.067 Sum_probs=158.0
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCC-CCCCCHHHHHHHHHHHcCC-CC-cccc-CCceeeecccC
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYA-PIIGAPDFGKLAAQLAYGE-DC-PQLK-DNLISIVQGIS 236 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~-p~~G~~~fr~a~~~~~~g~-~~-~~~~-~~~i~~~~~~~ 236 (420)
+.|||++|.+ +. ++++.|+++.+.+.. ..|. |..|.++|++++++++... .. .... ++.
T Consensus 104 ~~i~l~~g~~---~~--~~~~~v~a~~~~~~~----~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~-------- 166 (533)
T 3f6t_A 104 DAVNYCHTEL---GL--NRDKVVAEWVNGAVA----NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTD-------- 166 (533)
T ss_dssp HHHHHHHHTT---CC--CHHHHHHHHHHHHHT----CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEE--------
T ss_pred hheeccCCCC---Cc--CCcHHHHHHHHHHHh----CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcce--------
Confidence 3699999973 33 457777777776652 3454 8999999999999998221 11 0111 233
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHH---hcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK---NFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------- 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~---~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------- 298 (420)
++.|.|||+|+.+++..+. .+.| ||.|++++|+|++|..+++.+|++
T Consensus 167 --------------i~~t~G~t~al~~~~~~l~~~~l~~~-gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 231 (533)
T 3f6t_A 167 --------------LFPTEGGTAAIVYAFHSLAENHLLKK-GDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWE 231 (533)
T ss_dssp --------------EEEEEHHHHHHHHHHHHHHHTTSSCT-TCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSE
T ss_pred --------------EEEECCHHHHHHHHHHHhhhhhccCC-cCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCC
Confidence 3679999999999887421 2457 899999999999999887776552
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 232 ~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~ 311 (533)
T 3f6t_A 232 IEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSY 311 (533)
T ss_dssp ECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEES
T ss_pred CCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecC
Confidence
Q ss_pred -----------------hh-----hh---------------------------------------hhccCCCchHHHHHH
Q psy16707 299 -----------------KI-----LI---------------------------------------RAFYSSPPIHGARIV 317 (420)
Q Consensus 299 -----------------~~-----~~---------------------------------------r~~~s~pp~~ga~iv 317 (420)
.. ++ ....++++...|.++
T Consensus 312 SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~ 391 (533)
T 3f6t_A 312 SKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIME 391 (533)
T ss_dssp HHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHH
T ss_pred cccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHH
Confidence 11 11 122345555555542
Q ss_pred HHHhCChhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---------------
Q psy16707 318 QEILGDPKLK-----AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------------- 377 (420)
Q Consensus 318 ~~IL~dp~L~-----~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--------------- 377 (420)
+ ++...+|. .+|.++++.++++|+++|+.|.+.|. .+ |.+..++.|||.|+.++
T Consensus 392 a-~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~----~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~ 465 (533)
T 3f6t_A 392 A-LFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-AP----KDETDTNTHYYSLIDIYRLAEKIYGKEFRDYL 465 (533)
T ss_dssp H-HHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CC----CCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHH
T ss_pred H-HHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CC----ccccCCCceEEEEEehHhhhhhccchHHHHHh
Confidence 2 11112333 34567888899999999999999996 55 77788899999986543
Q ss_pred ------HHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 378 ------ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 378 ------~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
.+++.+|++++||++.|+ + |||++.+++++++++.++|.+++
T Consensus 466 ~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l 522 (533)
T 3f6t_A 466 TNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELL 522 (533)
T ss_dssp HHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHH
Confidence 267788999999999985 3 99999999999999999998875
No 50
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.59 E-value=9.4e-15 Score=147.38 Aligned_cols=240 Identities=16% Similarity=0.191 Sum_probs=159.6
Q ss_pred CCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCc
Q psy16707 143 KVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCP 222 (420)
Q Consensus 143 ~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~ 222 (420)
...+++.+...+ .++.|||+.|.+. +-+.++..+.++.+.+.+ .+.....|.+..|.+++|+++++++.... .
T Consensus 34 ~~~~~~~~~~~~----~~~~i~l~~g~~~-~~~~~~~~~~~~a~~~~~-~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~ 106 (430)
T 2x5f_A 34 YPKGILSQSAEA----KSTTYNATIGMAT-NKDGKMFASSLDAMFNDL-TPDEIFPYAPPQGIEELRDLWQQKMLRDN-P 106 (430)
T ss_dssp CCCHHHHHHHHT----TTCSEECCCSSCE-ETTEECCCHHHHTTBSSC-CGGGTSSCCCTTCCHHHHHHHHHHHHHHC-T
T ss_pred CchHHHHHHHhc----CCCcEEeeeeecc-CCCCchhhHHHHHHHHhc-CcccccccCCCCCCHHHHHHHHHHHhccC-c
Confidence 345566554443 4578999999843 223222222233322222 11135789999999999999999984322 1
Q ss_pred cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhh-cCcc---
Q psy16707 223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKH-TGLE--- 298 (420)
Q Consensus 223 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~-aG~~--- 298 (420)
.++++++ .+++.|.|||+|+.+++..+ +.| ||.|++++|+|+.|...++. .|++
T Consensus 107 ~~~~~~~-------------------~~i~~t~g~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~~~~~~g~~~~~ 164 (430)
T 2x5f_A 107 ELSIDNM-------------------SRPIVTNALTHGLSLVGDLF--VNQ-DDTILLPEHNWGNYKLVFNTRNGANLQT 164 (430)
T ss_dssp TCCGGGB-------------------CCCEEESHHHHHHHHHHHHH--CCT-TCEEEEESSCCTHHHHHHTTTTCCEEEE
T ss_pred ccCCCcc-------------------ceEEEcCCchHHHHHHHHHH--hCC-CCEEEEcCCcCccHHHHHHHhcCCeEEE
Confidence 2234441 00267999999999998765 457 89999999999999998888 6653
Q ss_pred --------------------------------------------------hhhhhh------------------------
Q psy16707 299 --------------------------------------------------KILIRA------------------------ 304 (420)
Q Consensus 299 --------------------------------------------------~~~~r~------------------------ 304 (420)
..+++.
T Consensus 165 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~ 244 (430)
T 2x5f_A 165 YPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV 244 (430)
T ss_dssp ECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS
T ss_pred EeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc
Confidence 000000
Q ss_pred --------------------------------------------------------------ccCCCchHHHHHHHHHhC
Q psy16707 305 --------------------------------------------------------------FYSSPPIHGARIVQEILG 322 (420)
Q Consensus 305 --------------------------------------------------------------~~s~pp~~ga~iv~~IL~ 322 (420)
.+.++|..++.++...|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 245 YTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp CCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred cchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 001112222222222232
Q ss_pred -ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCCCCcccCCCCceEEecCC---CH-HHHHHHHHhCCeEEe
Q psy16707 323 -DPKLKAQWLTEVKGMADRIISMRQSLKDNLQ----KEGSNKPWNHITDQIGMFCYTGL---NA-TQVEKLIKEHSVYLT 393 (420)
Q Consensus 323 -dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~----~~g~~~~w~~i~~q~GmF~~~~l---~~-~~v~~Ll~e~~Vy~~ 393 (420)
+ .+|.++++.++++++++|+.+.+.|+ +.| |..+.++.|+|.|+.+ +. +++++|++++||++.
T Consensus 325 ~~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 396 (430)
T 2x5f_A 325 NN----KQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH----WQAYDFNSGYFMAIKVHDVDPEALRKHLIDKYSIGVI 396 (430)
T ss_dssp SC----HHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT----EEECCCCBSSEEEEEESSSCHHHHHHHHHHHHCEECE
T ss_pred cC----hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC----ceeeCCCceEEEEeCCCCCCHHHHHHHHHHhCCEEEe
Confidence 2 24777777799999999999999998 444 6777788899998644 44 456788776999999
Q ss_pred CCC----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 394 KDG----RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 394 p~g----Ris~agl~~~ni~~la~AI~~vv 419 (420)
|++ |||++..++++++++.++|.+++
T Consensus 397 ~g~~~~iRis~~~~~~e~i~~~~~~l~~~l 426 (430)
T 2x5f_A 397 ALNATDIRIAFSCVEKDDIPHVFDSIAKAI 426 (430)
T ss_dssp ECSSSEEEEEGGGSCGGGHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence 863 99999778889999999998875
No 51
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.59 E-value=1.1e-14 Score=143.17 Aligned_cols=218 Identities=14% Similarity=0.111 Sum_probs=159.0
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+.+.|||+.|. + ..++++.|.+|......+ ..+.|.+ .| +++|+++++++....+..+.+++|
T Consensus 22 g~~~idl~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i--------- 84 (377)
T 3fdb_A 22 GQGVLPLWVAE---S--DFSTCPAVLQAITDAVQR-EAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWI--------- 84 (377)
T ss_dssp CTTSEECCSSC---C--CSCCCHHHHHHHHHHHHT-TCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGE---------
T ss_pred CCCeeeecccC---C--CCCCCHHHHHHHHHHHHc-CCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHE---------
Confidence 56889999995 3 345778888887776653 4678999 88 999999999984322222334555
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|||+|+.+++..+ +.| ||+|++++|+|+.|...++..|++
T Consensus 85 -------------~~t~g~~~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~l~~~l~ 148 (377)
T 3fdb_A 85 -------------FPIPDVVRGLYIAIDHF--TPA-QSKVIVPTPAYPPFFHLLSATQREGIFIDATGGINLHDVEKGFQ 148 (377)
T ss_dssp -------------EEESCHHHHHHHHHHHH--SCT-TCCEEEEESCCTHHHHHHHHHTCCEEEEECTTSCCHHHHHHHHH
T ss_pred -------------EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCCCCHHHHHHHhc
Confidence 56999999999988755 457 899999999999999888877763
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 149 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 228 (377)
T 3fdb_A 149 AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIA 228 (377)
T ss_dssp TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCG
T ss_pred cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCc
Confidence
Q ss_pred -----------h-------hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCC
Q psy16707 299 -----------K-------ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE--GSN 358 (420)
Q Consensus 299 -----------~-------~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~--g~~ 358 (420)
. ........+++..++.++...|.+ ..+.++.++++++++|+.+.+.|++. |
T Consensus 229 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-- 300 (377)
T 3fdb_A 229 GLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRY------GTDFLNQEVAYLKNNHDFLLHEIPKRIPG-- 300 (377)
T ss_dssp GGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHHHHHHHHHHHSTT--
T ss_pred chhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHHHHHhhCCC--
Confidence 0 000111234455555554444432 12446677799999999999999985 4
Q ss_pred CCCcccCCCCceEEecC-----CCHHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 359 KPWNHITDQIGMFCYTG-----LNATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 359 ~~w~~i~~q~GmF~~~~-----l~~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
|..+.++.|+|.|+. .+.+.++.|++++||++.|+ + |||++. +.++++...++|.++++
T Consensus 301 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~ 374 (377)
T 3fdb_A 301 --AKITPMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVS 374 (377)
T ss_dssp --CEECCCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred --ceEecCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHh
Confidence 777888899988763 34467789988999999874 2 999984 88888998888888763
No 52
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.59 E-value=4.3e-14 Score=142.22 Aligned_cols=247 Identities=12% Similarity=0.056 Sum_probs=171.2
Q ss_pred cccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHH
Q psy16707 131 PIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDF 208 (420)
Q Consensus 131 p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~f 208 (420)
|+.++++ ...+..+++..+.+.+. .++.|||+.|.+ + +..++.|.+|.....++. ..+.|.+..|.+++
T Consensus 12 ~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~i~l~~~~~---~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l 82 (429)
T 1yiz_A 12 KFDLPKR-YQGSTKSVWVEYIQLAA---QYKPLNLGQGFP---D--YHAPKYALNALAAAANSPDPLANQYTRGFGHPRL 82 (429)
T ss_dssp CCCSSSS-CCCCTTCHHHHHHHHHH---HHCCEECCSSSC---S--SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHH
T ss_pred ccchhHH-hhhCCchHHHHHHHHhc---cCCEEEecCCCC---C--CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHH
Confidence 4556665 66666665555544443 246899999972 2 335678888877766431 24689998999999
Q ss_pred HHHHHHHH---cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCC
Q psy16707 209 GKLAAQLA---YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPT 284 (420)
Q Consensus 209 r~a~~~~~---~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~ 284 (420)
++++++++ +|.. ++++ +| +.|.|||.|+.+++..+ +.| ||.|++++|+
T Consensus 83 ~~~la~~l~~~~g~~---~~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~Vl~~~p~ 134 (429)
T 1yiz_A 83 VQALSKLYSQLVDRT---INPMTEV----------------------LVTVGAYEALYATIQGH--VDE-GDEVIIIEPF 134 (429)
T ss_dssp HHHHHHHHHHHHTSC---CCTTTSE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESC
T ss_pred HHHHHHHHHHHhCCC---CCCcCCE----------------------EEecChHHHHHHHHHHh--cCC-CCEEEEcCCC
Confidence 99999998 4543 2344 55 56999999999998765 457 8999999999
Q ss_pred CCCcHHHHhhcCc---------------------c---------------------------------------------
Q psy16707 285 WGNHIPICKHTGL---------------------E--------------------------------------------- 298 (420)
Q Consensus 285 w~ny~~i~~~aG~---------------------~--------------------------------------------- 298 (420)
|+.|...++..|+ .
T Consensus 135 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (429)
T 1yiz_A 135 FDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW 214 (429)
T ss_dssp CTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 9999887775542 1
Q ss_pred ------------------------------------------------------------hh---hhhhccCCCchHHHH
Q psy16707 299 ------------------------------------------------------------KI---LIRAFYSSPPIHGAR 315 (420)
Q Consensus 299 ------------------------------------------------------------~~---~~r~~~s~pp~~ga~ 315 (420)
.. ..+....+++...+.
T Consensus 215 ~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 294 (429)
T 1yiz_A 215 NVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQE 294 (429)
T ss_dssp TCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHH
T ss_pred CcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhcccCCChHHHH
Confidence 11 111122344556666
Q ss_pred HHHHHhCCh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------------
Q psy16707 316 IVQEILGDP--KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------------- 377 (420)
Q Consensus 316 iv~~IL~dp--~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---------------- 377 (420)
++...|.+. .+ .+|.+.++.++++++++|+.+.+.|++.| |..+.++.|+|.|+.++
T Consensus 295 a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 369 (429)
T 1yiz_A 295 AIAVGFETELKRL-KSPECYFNSISGELMAKRDYMASFLAEVG----MNPTVPQGGYFMVADWSSLDSKVDLTQETDARK 369 (429)
T ss_dssp HHHHHHHHHHTTT-TSTTSHHHHHHHHHHHHHHHHHHHHHHHT----CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCH
T ss_pred HHHHHHhcccccc-cchHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEEcccccccccccccccCCC
Confidence 565555420 00 11234567777999999999999999886 66667778999986432
Q ss_pred H-HHHHHHHHhCCeEEeCC-------------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 378 A-TQVEKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 378 ~-~~v~~Ll~e~~Vy~~p~-------------g--Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
. +.+++|++++||++.|+ + |||++ .++++|+++.++|.++++
T Consensus 370 ~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 370 DYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF-KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp HHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC-SCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec-CCHHHHHHHHHHHHHhcc
Confidence 2 44577878999999763 2 99998 488889999999988753
No 53
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.58 E-value=2.6e-14 Score=141.15 Aligned_cols=228 Identities=19% Similarity=0.157 Sum_probs=160.1
Q ss_pred hHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCC
Q psy16707 146 SSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGED 220 (420)
Q Consensus 146 ~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~ 220 (420)
++..+.+...+ .++.+.|||+.|.+ + +..++.|++|......+...+.|.+..|.+++++++++++ +|.+
T Consensus 9 ~~~~~~~~~~~~~~~g~~~idl~~~~~---~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~ 83 (376)
T 2dou_A 9 VFLVVDEAKRKARERGVGLIDLSIGST---D--LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVG 83 (376)
T ss_dssp HHHHHHHHHHHHHHTTCCCEECSSCCC---C--CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred hHHHHHHHHHHhhccCCCEEeccCCCC---C--CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 34444444332 23567899999973 2 2356788888777664323578988789999999999988 3543
Q ss_pred CccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-
Q psy16707 221 CPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE- 298 (420)
Q Consensus 221 ~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~- 298 (420)
++++ .| +.|.|||+++.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 84 ---~~~~~~v----------------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~ 135 (376)
T 2dou_A 84 ---LDPRREA----------------------LALIGSQEGLAHLLLAL--TEP-EDLLLLPEVAYPSYFGAARVASLRT 135 (376)
T ss_dssp ---CCTTTSE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESSCCHHHHHHHHHTTCEE
T ss_pred ---CCCCccE----------------------EEcCCcHHHHHHHHHHh--cCC-CCEEEECCCCcHhHHHHHHHcCCEE
Confidence 2233 45 56999999999988765 457 899999999999999988877653
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 136 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 215 (376)
T 2dou_A 136 FLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLAL 215 (376)
T ss_dssp EEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGS
T ss_pred EEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhc
Confidence
Q ss_pred ------------------------------h-------hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16707 299 ------------------------------K-------ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRI 341 (420)
Q Consensus 299 ------------------------------~-------~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~ 341 (420)
. ........+++..++.++...|.+. .+.++.+++++
T Consensus 216 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~ 289 (376)
T 2dou_A 216 PGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTP------KEVVRGYARVY 289 (376)
T ss_dssp TTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC------HHHHHHHHHHH
T ss_pred CCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHH
Confidence 0 1111122345666776666667541 23456667899
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCC
Q psy16707 342 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSK 406 (420)
Q Consensus 342 ~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ 406 (420)
+++|+.+.+.|++. |....++.|+|.|+.++ . +.+++|+++ ||++.|+ + |||++. +.+
T Consensus 290 ~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~ 362 (376)
T 2dou_A 290 RERALGMAEALKGV-----LSLLPPRATMYLWGRLPEGVDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLE 362 (376)
T ss_dssp HHHHHHHHHHHTTT-----SEECCCCBSSEEEEECCTTCCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHH
T ss_pred HHHHHHHHHHHHHh-----cCccCCCeeEEEEEECCCCCCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHH
Confidence 99999999999875 45566778999986443 3 455777655 9999874 2 999985 778
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
+++.+.++|.+++
T Consensus 363 ~i~~~l~~l~~~l 375 (376)
T 2dou_A 363 ELLEAAKRIREAL 375 (376)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh
Confidence 8888888888765
No 54
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.58 E-value=1.5e-14 Score=146.04 Aligned_cols=239 Identities=15% Similarity=0.107 Sum_probs=163.4
Q ss_pred ChHHHHHHHHHccCCCCceeecccccccCC-CCCCchHHHHHHHHHH-H-cc-CCCCCCCCCCCCHHHHHHHHHHHcCCC
Q psy16707 145 PSSNLLTEAFKKDTNVNKINLGVGAYRDDQ-GKPYVLPSVKQADEIV-L-NK-NLDKEYAPIIGAPDFGKLAAQLAYGED 220 (420)
Q Consensus 145 d~i~~l~~~~~~d~~~~kInL~iG~y~d~d-g~~~~~~~V~~a~~~~-~-~~-~~~~~Y~p~~G~~~fr~a~~~~~~g~~ 220 (420)
+.++......++. ..+|||++|. ++ ..+++++.|+++.... . .. ...+.|.+..|.++||+++++++ +
T Consensus 19 ~~~~~~~~~l~~~--~~~i~l~~g~---~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~-~-- 90 (422)
T 3d6k_A 19 EEVTAKYAELKAK--NLSLDLTRGK---PSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL-G-- 90 (422)
T ss_dssp HHHHHHHHHHHHT--TCCEECCCCS---CCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH-T--
T ss_pred HHHHHHHHHHhcc--CCeEeCCCCC---CChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh-C--
Confidence 3455555555442 3589999997 32 0134555566654322 1 11 13568999999999999999988 3
Q ss_pred CccccCCceeeecccCCCCccccccccccceeecccchHHH--HHHHHHHHhc-CCC--------CCEEEEcCCCCCCcH
Q psy16707 221 CPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSL--RVGAAFLKNF-FPG--------EKVIYVPTPTWGNHI 289 (420)
Q Consensus 221 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal--~~~~~~l~~~-~p~--------gd~VlvpdP~w~ny~ 289 (420)
+++++| +.|.|++.++ .+++..+..- .++ +|+|++++|+|+.|.
T Consensus 91 ---~~~~~i----------------------~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~ 145 (422)
T 3d6k_A 91 ---LPADLV----------------------VAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF 145 (422)
T ss_dssp ---CCGGGE----------------------EECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH
T ss_pred ---CChhHE----------------------EEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH
Confidence 234555 5699999987 5665555321 011 358999999999999
Q ss_pred HHHhhcCcc-----------------------------------------------------------------------
Q psy16707 290 PICKHTGLE----------------------------------------------------------------------- 298 (420)
Q Consensus 290 ~i~~~aG~~----------------------------------------------------------------------- 298 (420)
..++.+|++
T Consensus 146 ~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~ 225 (422)
T 3d6k_A 146 TITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALH 225 (422)
T ss_dssp HHHHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTC
T ss_pred HHHHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCcccc
Confidence 999888774
Q ss_pred ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707 299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP 324 (420)
Q Consensus 299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp 324 (420)
....+....+++..++.++...|++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~ 305 (422)
T 3d6k_A 226 TLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDV 305 (422)
T ss_dssp BSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSH
T ss_pred ccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCc
Confidence 01112222345777777777778763
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC-----
Q psy16707 325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD----- 395 (420)
Q Consensus 325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~----- 395 (420)
+.|.++++.++++|+++|+.+.+.|++. ..-+.|....++.|+|.|+.++ .+++..+++++||++.|+
T Consensus 306 ---~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gV~v~~~g~~f~ 382 (422)
T 3d6k_A 306 ---AGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFP 382 (422)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTCHHHHHHHHHHTTEECCCTTTTSG
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCCHHHHHHHHHHCCeEEEcCccccC
Confidence 4567778888899999999998888752 1001145556788999997553 566766778999999882
Q ss_pred -------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 -------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++..+.++++++.++|.+++
T Consensus 383 ~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l 415 (422)
T 3d6k_A 383 LHNDPNNENIRLAPSLPPVAELEVAMDGFATCV 415 (422)
T ss_dssp GGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHH
Confidence 1 99998778889999999888765
No 55
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.58 E-value=4.1e-15 Score=150.38 Aligned_cols=254 Identities=12% Similarity=0.050 Sum_probs=167.3
Q ss_pred cchhhhccccCCChHHHHHHHHH-ccCCCCce-eecccccccCCCCCCchHHHHHHHHHHHcc-------CC----CCCC
Q psy16707 133 RFQDARTSSVKVPSSNLLTEAFK-KDTNVNKI-NLGVGAYRDDQGKPYVLPSVKQADEIVLNK-------NL----DKEY 199 (420)
Q Consensus 133 ~~~~~~~~~~~~d~i~~l~~~~~-~d~~~~kI-nL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-------~~----~~~Y 199 (420)
.+|+.-..-.+++++..+...+. ....+++| ||+.|. |+..+++.+.++++...+..+ .. ...|
T Consensus 3 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 79 (444)
T 3if2_A 3 KFSKFGQKFTQPTGISQLMDDLGDALKSDQPVNMLGGGN---PAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANY 79 (444)
T ss_dssp CCCHHHHHHHSCCHHHHHHHHHHHHHHSSSCCEECSCCC---CCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSC
T ss_pred CcchhhhhccCchhHHHHHHHHHhhhcCchhhhccCCCC---CCcccchHHHHHHHHHHHHhccccccccchhhhhhhcc
Confidence 34444223345677777655443 23458999 999996 555344557777777766532 11 2579
Q ss_pred CCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC---
Q psy16707 200 APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK--- 276 (420)
Q Consensus 200 ~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd--- 276 (420)
.+..|.++||+++++++....+..+.+++| +.|.|||+|+.+++..+ +.| ||
T Consensus 80 ~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i----------------------~~t~G~t~al~~~~~~l--~~~-gd~~~ 134 (444)
T 3if2_A 80 SNPQGDSAFIDALVGFFNRHYDWNLTSENI----------------------ALTNGSQNAFFYLFNLF--GGA-FVNEH 134 (444)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHCCCCCGGGE----------------------EEESSHHHHHHHHHHHS--SEE-EECC-
T ss_pred CCCCCCHHHHHHHHHHHHhhcCCCCCHHHE----------------------EEecCcHHHHHHHHHHH--hCC-Ccccc
Confidence 999999999999999983221112345555 66999999999998755 346 77
Q ss_pred -----------EEEEc-CCCCCCcHHHH------hhcC------------------c------------c----------
Q psy16707 277 -----------VIYVP-TPTWGNHIPIC------KHTG------------------L------------E---------- 298 (420)
Q Consensus 277 -----------~Vlvp-dP~w~ny~~i~------~~aG------------------~------------~---------- 298 (420)
.|+++ +|+|+.|...+ ...| . .
T Consensus 135 ~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~ 214 (444)
T 3if2_A 135 SQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSR 214 (444)
T ss_dssp ------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEES
T ss_pred ccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCC
Confidence 78887 99999886421 1000 0 0
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 215 p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~ 294 (444)
T 3if2_A 215 PTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVI 294 (444)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEEEEECHHHH
Confidence
Q ss_pred ---hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec
Q psy16707 299 ---KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG-MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 374 (420)
Q Consensus 299 ---~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~-m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~ 374 (420)
....+....+++..++.++...|.+. +|.++++. ++++++++|+.+.+.|++.-....|....++.|+|.|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~ 370 (444)
T 3if2_A 295 EAVSAMNAVVNLAPTRFGAAIATPLVAND----RIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWL 370 (444)
T ss_dssp HHHHHHHHHHHSSCCCHHHHHHHHHHHTS----HHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEE
T ss_pred HHHHHHHHhccCCCChHHHHHHHHHHHcC----chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEE
Confidence 11112233445667777777767653 44455554 77889999999998887631111256667788999986
Q ss_pred -----CCCHHHHHHHHHhCCeEEeCC------------------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707 375 -----GLNATQVEKLIKEHSVYLTKD------------------GRISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 375 -----~l~~~~v~~Ll~e~~Vy~~p~------------------gRis~agl~~~ni~~la~AI~~vv 419 (420)
+.+.+.+...++++||++.|+ -|||++. +.++|++..++|.+++
T Consensus 371 ~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~ 437 (444)
T 3if2_A 371 WFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVV 437 (444)
T ss_dssp EETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHH
Confidence 345555544447899999863 1999997 8889999998888775
No 56
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.57 E-value=6.8e-14 Score=137.57 Aligned_cols=219 Identities=9% Similarity=0.089 Sum_probs=159.9
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
.+.+.|||++|. + ..++++.|.+|......+ ..+.|.+. ..++++++++++....+..+.+++|
T Consensus 22 ~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v-------- 85 (383)
T 3kax_A 22 KNEELIHAWIAD---M--DFEVPQPIQTALKKRIEH-PIFGYTLP--PENIGDIICNWTKKQYNWDIQKEWI-------- 85 (383)
T ss_dssp SSSCCEECCCSS---C--SSCCCHHHHHHHHHHHHS-CCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGE--------
T ss_pred CCCCeeeccccc---C--CCCCCHHHHHHHHHHHhc-CCCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhE--------
Confidence 356899999995 3 346778888887776653 46788776 7899999999883221111234445
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
+.|.|||+++.+++..+ +.| ||+|++++|+|+.|...++..|++
T Consensus 86 --------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 148 (383)
T 3kax_A 86 --------------VFSAGIVPALSTSIQAF--TKE-NESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEH 148 (383)
T ss_dssp --------------EEESCHHHHHHHHHHHH--CCT-TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHH
T ss_pred --------------EEcCCHHHHHHHHHHHh--CCC-CCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHH
Confidence 66999999999988765 457 899999999999999988877664
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 149 l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~ 228 (383)
T 3kax_A 149 LEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAP 228 (383)
T ss_dssp HHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECS
T ss_pred HHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEC
Confidence
Q ss_pred ----------------------hhh--hh--hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ----------------------KIL--IR--AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL 352 (420)
Q Consensus 299 ----------------------~~~--~r--~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L 352 (420)
..+ .+ ..+++++..++.++...|.+. .+| ++.++++++++|+.+.+.|
T Consensus 229 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~l 302 (383)
T 3kax_A 229 SKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC---NDW---LNEIRFYIEDNAKFACEYI 302 (383)
T ss_dssp HHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC---HHH---HHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh---HHH---HHHHHHHHHHHHHHHHHHH
Confidence 000 01 123466777777666666542 333 5566689999999999999
Q ss_pred Hhc--CCCCCCcccCCCCceEEecC-----CCH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHH
Q psy16707 353 QKE--GSNKPWNHITDQIGMFCYTG-----LNA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKA 414 (420)
Q Consensus 353 ~~~--g~~~~w~~i~~q~GmF~~~~-----l~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~A 414 (420)
++. | +..+.++.|+|.|+. .+. +.+++|++++||++.|+ + ||+++ .+.+++++..++
T Consensus 303 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~-~~~~~i~~~l~~ 377 (383)
T 3kax_A 303 KDHIPT----LSVMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG-CPRSVLEEILNR 377 (383)
T ss_dssp HHHCTT----CEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS-SCHHHHHHHHHH
T ss_pred HhhCCC----ceEecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc-CCHHHHHHHHHH
Confidence 884 4 677788889988753 344 45577877999999874 2 99998 588889999999
Q ss_pred HHHHhC
Q psy16707 415 IHAVTK 420 (420)
Q Consensus 415 I~~vv~ 420 (420)
|.++++
T Consensus 378 l~~~l~ 383 (383)
T 3kax_A 378 LRHTFS 383 (383)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 988763
No 57
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.57 E-value=1.4e-13 Score=133.19 Aligned_cols=208 Identities=13% Similarity=0.160 Sum_probs=150.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
..+.|+|+.+. +. .++++.|++|...... ..+.| |..|.++||+++++++ |. +++.|
T Consensus 15 ~~~~i~l~~n~----~~-~~~~~~v~~a~~~~~~--~~~~y-~~~~~~~lr~~la~~~-~~-----~~~~i--------- 71 (337)
T 3p1t_A 15 AAQAVCLAFNE----NP-EAVEPRVQAAIAAAAA--RINRY-PFDAEPRVMRKLAEHF-SC-----PEDNL--------- 71 (337)
T ss_dssp CCCCEECSSCC----CC-SCCCHHHHHHHHHHGG--GTTSC-CTTHHHHHHHHHHHHH-TS-----CGGGE---------
T ss_pred CCCceEeeCCC----CC-CCCCHHHHHHHHHhhh--hhccC-CCCchHHHHHHHHHHh-Cc-----CHHHE---------
Confidence 34679999885 22 3467888888877654 35778 5679999999999986 42 23444
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|+|+++.+++..+ | ||+|++++|+|+.|...++..|++
T Consensus 72 -------------~~t~G~~~~l~~~~~~~----~-gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 133 (337)
T 3p1t_A 72 -------------MLVRGIDECFDRISAEF----S-SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV 133 (337)
T ss_dssp -------------EEESHHHHHHHHHHHHS----T-TSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC
T ss_pred -------------EEeCCHHHHHHHHHHhc----C-CCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh
Confidence 56999999999988643 7 899999999999999999988875
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 134 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 213 (337)
T 3p1t_A 134 SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGP 213 (337)
T ss_dssp CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECC
T ss_pred cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCcEEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeC
Confidence
Q ss_pred ----hhhhh-hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe
Q psy16707 299 ----KILIR-AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 373 (420)
Q Consensus 299 ----~~~~r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~ 373 (420)
..+.+ ....+++..++.++...|.+. ..|. ...+++.++|+.+.+.|+++| |...+++.++|.+
T Consensus 214 ~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~---~~~~----~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~ 282 (337)
T 3p1t_A 214 SELIAAMKRKQWFCNVGTLDLHALEAALDND---RARE----AHIAKTLAQRRRVADALRGLG----YRVASSEANFVLV 282 (337)
T ss_dssp HHHHHHHHTTSCTTCSCHHHHHHHHHHHTCH---HHHH----HHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSEEEE
T ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHhCCH---HHHH----HHHHHHHHHHHHHHHHHHHCc----CEECCCCCeEEEE
Confidence 11111 123456677777777777653 2232 333556777889999999887 6656666555555
Q ss_pred cCCCHHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 374 TGLNATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 374 ~~l~~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
...+.+++..+++++||++.|+. |||++ +.++++++.+++.++.+
T Consensus 283 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 283 ENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYSD 335 (337)
T ss_dssp ECTTTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred EcCCHHHHHHHHHHCCeEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhh
Confidence 44455666666789999998852 99987 57899999999998753
No 58
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.57 E-value=1.2e-13 Score=137.71 Aligned_cols=241 Identities=13% Similarity=0.208 Sum_probs=167.9
Q ss_pred chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a 211 (420)
++++ ...+...++..+.+..+ +++.|||+.|. ++....+.+.|.+|.....++. ....|.+..|.++++++
T Consensus 10 ~~~~-~~~~~~~~~~~~~~~~~---~~~~i~l~~g~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~ 82 (397)
T 2zyj_A 10 FGKG-AGRIQASTIRELLKLTQ---RPGILSFAGGL---PAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAF 82 (397)
T ss_dssp SCGG-GGGCCCCHHHHHHHHHT---STTCEEESSCC---CCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHH
T ss_pred hhhh-hcccCchHHHHHHhhcc---CCCceecCCCC---CCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHH
Confidence 4555 55666666666655442 45789999997 2222345677877776655421 23689988999999999
Q ss_pred HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+++++ |. +++.| +.|.||++++.+++..+ +.| ||.|++++|+|+.|...
T Consensus 83 la~~~-g~-----~~~~v----------------------~~~~g~~~al~~~~~~~--~~~-gd~Vl~~~p~y~~~~~~ 131 (397)
T 2zyj_A 83 VAEWI-GV-----RPEEV----------------------LITTGSQQALDLVGKVF--LDE-GSPVLLEAPSYMGAIQA 131 (397)
T ss_dssp HHHHH-TS-----CGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHH
T ss_pred HHHHh-CC-----ChhhE----------------------EEeccHHHHHHHHHHHh--CCC-CCEEEEeCCCcHHHHHH
Confidence 99988 42 24445 56999999999988755 457 89999999999999988
Q ss_pred HhhcCcc-------------------------------------------------------------------------
Q psy16707 292 CKHTGLE------------------------------------------------------------------------- 298 (420)
Q Consensus 292 ~~~aG~~------------------------------------------------------------------------- 298 (420)
++..|++
T Consensus 132 ~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 211 (397)
T 2zyj_A 132 FRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFG 211 (397)
T ss_dssp HHTTCCEEEEEEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCS
T ss_pred HHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCC
Confidence 8877764
Q ss_pred -----------hh------h-h------------------------------hhccCCCchHHHHHHHHHhCChhhHHHH
Q psy16707 299 -----------KI------L-I------------------------------RAFYSSPPIHGARIVQEILGDPKLKAQW 330 (420)
Q Consensus 299 -----------~~------~-~------------------------------r~~~s~pp~~ga~iv~~IL~dp~L~~~w 330 (420)
.. + + .....+++..++.++...|.+ ..|
T Consensus 212 g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~----~~~ 287 (397)
T 2zyj_A 212 EARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKE----GFS 287 (397)
T ss_dssp SCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT----THH
T ss_pred CCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh----CCH
Confidence 00 0 0 011112344555555555654 245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC----------
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD---------- 395 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~---------- 395 (420)
+.++.++++++++|+.+.+.|++.- |+.+....++.|+|.|+.+ +. +.+++|+ ++||++.|+
T Consensus 288 -~~~~~~~~~~~~~~~~l~~~L~~~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~ 364 (397)
T 2zyj_A 288 -ERLERVRRVYREKAQAMLHALDREV-PKEVRYTRPKGGMFVWMELPKGLSAEGLFRRAL-EENVAFVPGGPFFANGGGE 364 (397)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHS-CTTSEECCCSBSSEEEEECSTTCCHHHHHHHHH-HTTEEEEESGGGCTTSCCT
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEccCCccEEEEEEcCCCCCHHHHHHHHH-HCCCEEechHHhcCCCCCC
Confidence 6677888999999999999998751 1115656677899998644 34 4456775 559999863
Q ss_pred C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++..+.++++.+.++|.+++
T Consensus 365 ~~iRis~~~~~~~~i~~~~~~l~~~l 390 (397)
T 2zyj_A 365 NTLRLSYATLDREGIAEGVRRLGRAL 390 (397)
T ss_dssp TEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 2 99999777888999988888765
No 59
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.55 E-value=1.1e-14 Score=146.20 Aligned_cols=227 Identities=16% Similarity=0.093 Sum_probs=154.8
Q ss_pred CCceeecccccccCCC-CCCchHHHHHHHH--HHHcc-CCCCCC-CCCCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707 160 VNKINLGVGAYRDDQG-KPYVLPSVKQADE--IVLNK-NLDKEY-APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG 234 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg-~~~~~~~V~~a~~--~~~~~-~~~~~Y-~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~ 234 (420)
.++|||+.|. ++. .+++++.|++|.. .+..+ ...+.| .+..|.++||+++++++ +. +++.|
T Consensus 25 ~~~i~l~~g~---p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~-~~-----~~~~i----- 90 (423)
T 3ez1_A 25 GLNLNMQRGQ---PADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL-DV-----KAENV----- 90 (423)
T ss_dssp TCCEESCCCC---CCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT-TS-----CGGGE-----
T ss_pred CceEecCCCC---CChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh-CC-----ChhhE-----
Confidence 4789999997 331 1345556666653 33322 134789 99999999999999987 32 34445
Q ss_pred cCCCCccccccccccceeecccchHHHH--HHHHHHHhcCCC--------CCEEEEcCCCCCCcHHHHhhcCcc------
Q psy16707 235 ISGTGSLRVGAAFQISIVQGISGTGSLR--VGAAFLKNFFPG--------EKVIYVPTPTWGNHIPICKHTGLE------ 298 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~--~~~~~l~~~~p~--------gd~VlvpdP~w~ny~~i~~~aG~~------ 298 (420)
+.|.||++++. +++..+....|+ ||+|++++|+|+.|...++.+|++
T Consensus 91 -----------------~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 153 (423)
T 3ez1_A 91 -----------------LVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDM 153 (423)
T ss_dssp -----------------EECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEE
T ss_pred -----------------EEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccC
Confidence 66999999997 666544321152 499999999999999998888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 154 ~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 233 (423)
T 3ez1_A 154 QSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFV 233 (423)
T ss_dssp ETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHH
T ss_pred CCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchh
Confidence
Q ss_pred -----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16707 299 -----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGM 337 (420)
Q Consensus 299 -----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m 337 (420)
....+....+++..++.++...|.+ +...|.+.++.+
T Consensus 234 ~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~ 311 (423)
T 3ez1_A 234 VLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTE--YPGGLEGLMRDH 311 (423)
T ss_dssp HHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH--STTHHHHHHHHH
T ss_pred hhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHh--ccchHHHHHHHH
Confidence 0001222334556666666665543 113445667777
Q ss_pred HHHHHHHHHHHHHHHHh-cCCCC-CCcccCCCCceEEecCC---CHHHHHHHHHhCCeEEeC-C-----------C--cE
Q psy16707 338 ADRIISMRQSLKDNLQK-EGSNK-PWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTK-D-----------G--RI 398 (420)
Q Consensus 338 ~~r~~~~R~~l~~~L~~-~g~~~-~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e~~Vy~~p-~-----------g--Ri 398 (420)
++.++++|+.+.+.|.+ +..-+ .+....++.|+|.|+.+ +.+++..+++++||++.| + + ||
T Consensus 312 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRi 391 (423)
T 3ez1_A 312 AAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRL 391 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEE
Confidence 77888888877777755 11101 14445678899998754 467777777899999998 2 1 99
Q ss_pred EEcccCCCCHHHHHHHHHHHh
Q psy16707 399 SMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~agl~~~ni~~la~AI~~vv 419 (420)
|++..+.+++++..++|.+++
T Consensus 392 s~~~~~~~~i~~~~~~l~~~l 412 (423)
T 3ez1_A 392 APTRPPVEEVRTAMQVVAACI 412 (423)
T ss_dssp CCSSSCHHHHHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHHHH
Confidence 998778999999999988875
No 60
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.54 E-value=3.7e-14 Score=142.97 Aligned_cols=124 Identities=39% Similarity=0.697 Sum_probs=117.2
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
..+++...|..|++||.+++.+++.+|.++.|+.+|.++++.|+++++..|+.|.+.|++.+.++.|..+..+.|||+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~ 374 (420)
T 4f4e_A 295 LSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYS 374 (420)
T ss_dssp HHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEEC
T ss_pred HHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEe
Confidence 45677778899999999999999999999999999999999999999999999999999988777799999999999999
Q ss_pred CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
+++.+++..+.++++||+.+.||||++++++.+|++++++|.++
T Consensus 375 ~~~~~~~~~~l~~~gI~v~~~~Ris~~~~~~~~i~~~~~~l~~~ 418 (420)
T 4f4e_A 375 GLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAAV 418 (420)
T ss_dssp CCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEecCCCeEEEecCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876
No 61
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.54 E-value=1.7e-14 Score=145.69 Aligned_cols=242 Identities=13% Similarity=0.152 Sum_probs=165.5
Q ss_pred ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLA 216 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~ 216 (420)
+..+..+++..+.+.. ..++.|||+.|. ++....+.+.|.+|.....++. ....|.+..|.+++|+++++++
T Consensus 25 ~~~~~~~~~~~~~~~~---~~~~~idl~~g~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l 98 (425)
T 1vp4_A 25 GQNMKSSIIREILKFA---ADKDAISFGGGV---PDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLL 98 (425)
T ss_dssp HHTCCCCCHHHHTTTT---TSTTCEECCCCS---CCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHH
T ss_pred hhcCCCcHHHHHHHhc---cCCCceeCCCCC---CCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHH
Confidence 4556666665554332 356789999997 3322346777888777665431 1368999999999999999998
Q ss_pred c---CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707 217 Y---GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK 293 (420)
Q Consensus 217 ~---g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~ 293 (420)
. |.. .++++.| +.|.|||+++.+++..+ +.| ||.|++++|+|+.|...++
T Consensus 99 ~~~~g~~--~~~~~~v----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~~~ 151 (425)
T 1vp4_A 99 ERMYGIT--GLDEDNL----------------------IFTVGSQQALDLIGKLF--LDD-ESYCVLDDPAYLGAINAFR 151 (425)
T ss_dssp HHHHCCC--SCCGGGE----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHHHH
T ss_pred HhccCCC--CCCcccE----------------------EEeccHHHHHHHHHHHh--CCC-CCEEEEeCCCcHHHHHHHH
Confidence 3 421 0224444 67999999999988755 457 8999999999998876655
Q ss_pred hcCcc---------------------------------------------------------------------------
Q psy16707 294 HTGLE--------------------------------------------------------------------------- 298 (420)
Q Consensus 294 ~aG~~--------------------------------------------------------------------------- 298 (420)
..|++
T Consensus 152 ~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~ 231 (425)
T 1vp4_A 152 QYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYG 231 (425)
T ss_dssp TTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSST
T ss_pred HcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 44321
Q ss_pred --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707 299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA 328 (420)
Q Consensus 299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~ 328 (420)
.........+++..++.++...|.+.
T Consensus 232 ~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---- 307 (425)
T 1vp4_A 232 ALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERY---- 307 (425)
T ss_dssp TCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHS----
T ss_pred cccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcC----
Confidence 00011111234556666666555321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC------
Q psy16707 329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNK--PWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD------ 395 (420)
Q Consensus 329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~--~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~------ 395 (420)
.|.+.++.++++++++|+.+.+.|++.. |+ .|....++.|+|.|+.++ .+.++.|+++ ||++.|+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~g~~f~~~ 385 (425)
T 1vp4_A 308 DLLEQLKPTIELYRRKRTVMLNALEEYF-SDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRK-KVFYVPGRVFKVY 385 (425)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHS-TTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHH-TEECEEGGGGCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCceEEecCCccEEEEEEcCCCCCHHHHHHHHHHC-CCEEECchhhcCC
Confidence 3456677888999999999999998751 11 266666788999986443 2456777666 9999863
Q ss_pred ----C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 ----G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ----g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++..++++++++.++|.+++
T Consensus 386 ~~~~~~iRis~~~~~~e~i~~~l~~l~~~l 415 (425)
T 1vp4_A 386 DEPSPSMRLSFCLPPDEKIVEGIKRLREVV 415 (425)
T ss_dssp CCCCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 2 99999777888999999888765
No 62
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.54 E-value=9.6e-14 Score=140.37 Aligned_cols=224 Identities=17% Similarity=0.245 Sum_probs=159.2
Q ss_pred cCCC-CceeecccccccCCCCCCchHHHHHHHHHHHccCC-----------CCCCCCCCCCHHHHHHHHHHHcC--CCCc
Q psy16707 157 DTNV-NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL-----------DKEYAPIIGAPDFGKLAAQLAYG--EDCP 222 (420)
Q Consensus 157 d~~~-~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~-----------~~~Y~p~~G~~~fr~a~~~~~~g--~~~~ 222 (420)
+.++ ..|+|++.. ++...+.+.++......... ...|.+..|.++|++++++++.. ....
T Consensus 34 ~~~p~~~i~lg~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~ 107 (435)
T 3piu_A 34 VHNTNGIIQMGLAE------NQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKV 107 (435)
T ss_dssp TTBTTSBEECSSCC------CCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSS
T ss_pred ccCCCCeEEecccc------ccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCC
Confidence 3343 466888864 46678888888776432110 15699999999999999998841 1112
Q ss_pred cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh-hcCcc---
Q psy16707 223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK-HTGLE--- 298 (420)
Q Consensus 223 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~-~aG~~--- 298 (420)
.++++.| +.|.|||+|+..++..+ +.| ||.|++++|+|++|...+. .+|++
T Consensus 108 ~~~~~~v----------------------~~~~gg~~a~~~~~~~l--~~~-gd~vl~~~p~~~~~~~~~~~~~g~~~~~ 162 (435)
T 3piu_A 108 TFDPNHL----------------------VLTAGATSANETFIFCL--ADP-GEAVLIPTPYYPGFDRDLKWRTGVEIVP 162 (435)
T ss_dssp CCCGGGE----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHTTTTTCCEEEE
T ss_pred CCCHHHE----------------------EEcCChHHHHHHHHHHh--cCC-CCeEEECCCccccHHHHHHHhcCCEEEE
Confidence 2334444 67999999999998765 447 8999999999999988776 55543
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 163 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~ 242 (435)
T 3piu_A 163 IHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS 242 (435)
T ss_dssp EECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSC
T ss_pred eeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence
Q ss_pred --------hh-------------h-h------------------------------hhccCCCchHHHHHHHHHhCChhh
Q psy16707 299 --------KI-------------L-I------------------------------RAFYSSPPIHGARIVQEILGDPKL 326 (420)
Q Consensus 299 --------~~-------------~-~------------------------------r~~~s~pp~~ga~iv~~IL~dp~L 326 (420)
.. + + ...+.+++...+.+++.+|.+.
T Consensus 243 ~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 320 (435)
T 3piu_A 243 FISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDK-- 320 (435)
T ss_dssp CCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCH--
T ss_pred CcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcCh--
Confidence 00 0 1 0111223344555555555543
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH-----------HHHHHHHHhCCeEEeC
Q psy16707 327 KAQW-LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-----------TQVEKLIKEHSVYLTK 394 (420)
Q Consensus 327 ~~~w-~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~-----------~~v~~Ll~e~~Vy~~p 394 (420)
+| .+.++.++++++++|+.+.+.|++.| |..+.++.|+|.|+.++. +.+++|++++||++.|
T Consensus 321 --~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 394 (435)
T 3piu_A 321 --KLTKNYIAENHKRLKQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP 394 (435)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEE
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeC
Confidence 34 34567778999999999999999887 777788888999975542 4568888888999987
Q ss_pred C--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 395 D--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 ~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ + ||+++.++.++++++.++|.+++
T Consensus 395 g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l 429 (435)
T 3piu_A 395 GSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV 429 (435)
T ss_dssp GGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 3 1 99998778999999999998875
No 63
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.53 E-value=4.3e-14 Score=140.76 Aligned_cols=125 Identities=65% Similarity=1.063 Sum_probs=118.6
Q ss_pred chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
+..+++.+.|..+++||..++.+++.+|++++++..|.++++.++++++..|..|.+.|++.+.++.|.++..+.|||.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 354 (401)
T 7aat_A 275 VESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCF 354 (401)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEE
T ss_pred HHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEe
Confidence 44677788899999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
.+++.++++.|.++++||+.+.+|||++++|+.+|++++++|.++
T Consensus 355 ~~~~~~~~~~ll~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~ 399 (401)
T 7aat_A 355 TGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV 399 (401)
T ss_dssp CCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhCCEeccCCCeEEeccCChhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999876
No 64
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.53 E-value=3e-13 Score=135.36 Aligned_cols=240 Identities=15% Similarity=0.186 Sum_probs=160.8
Q ss_pred CChHHHHHHHHHccCC-CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC----
Q psy16707 144 VPSSNLLTEAFKKDTN-VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG---- 218 (420)
Q Consensus 144 ~d~i~~l~~~~~~d~~-~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g---- 218 (420)
.+++..+...+....+ .+.|||+.|.... .+..++++.|.+|......+...+.|.+..|.+++|+++++++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~ 94 (416)
T 1bw0_A 16 FNPIRTVSDNAKPSPSPKPIIKLSVGDPTL-DKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVH 94 (416)
T ss_dssp CCHHHHHHHTCCCCCSCSCCEECCCCCTTT-TSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCC
T ss_pred ccHHHHHHHHHHHhhcCCCeEEecCcCCCc-ccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcc
Confidence 4456666655533332 4689999996211 134577788888877766543357899999999999999998851
Q ss_pred --CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707 219 --EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG 296 (420)
Q Consensus 219 --~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG 296 (420)
..+..+++++| +.|.|||.|+.+++..+ +.| ||.|++++|+|+.|...++..|
T Consensus 95 ~~~~~~~~~~~~v----------------------~~~~g~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g 149 (416)
T 1bw0_A 95 KEELKSTIVKDNV----------------------VLCSGGSHGILMAITAI--CDA-GDYALVPQPGFPHYETVCKAYG 149 (416)
T ss_dssp STTTGGGCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHHHHHTT
T ss_pred cccCCCCCCcceE----------------------EEeCChHHHHHHHHHHh--CCC-CCEEEEcCCCcHhHHHHHHHcC
Confidence 12222334444 67999999999988765 457 8999999999999999888777
Q ss_pred cc---------------------------------------------------------------------------h--
Q psy16707 297 LE---------------------------------------------------------------------------K-- 299 (420)
Q Consensus 297 ~~---------------------------------------------------------------------------~-- 299 (420)
++ .
T Consensus 150 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 229 (416)
T 1bw0_A 150 IGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDP 229 (416)
T ss_dssp CEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCT
T ss_pred cEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 64 0
Q ss_pred --hh--------------------------------------------h---hh---ccCCCchHHHHHHHHHhCChhhH
Q psy16707 300 --IL--------------------------------------------I---RA---FYSSPPIHGARIVQEILGDPKLK 327 (420)
Q Consensus 300 --~~--------------------------------------------~---r~---~~s~pp~~ga~iv~~IL~dp~L~ 327 (420)
.. . +. ...+++..++.++...|.+. .
T Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~ 307 (416)
T 1bw0_A 230 NATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNT--P 307 (416)
T ss_dssp TCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSS--C
T ss_pred CCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcc--c
Confidence 00 0 00 00112222233222222210 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCC---------CH-HHHHHHHHhCCeEEeCC-
Q psy16707 328 AQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGL---------NA-TQVEKLIKEHSVYLTKD- 395 (420)
Q Consensus 328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l---------~~-~~v~~Ll~e~~Vy~~p~- 395 (420)
.+.++.++++++++|+.+.+.|+++ | |..+.++.|+|.|+.+ +. +.+++|++++||++.|+
T Consensus 308 ---~~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 380 (416)
T 1bw0_A 308 ---QEHLDQIVAKIEESAMYLYNHIGECIG----LAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGT 380 (416)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHTTSTT----EEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGG
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhCCC----CcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEeccc
Confidence 2345666789999999999999876 4 5656677899988533 33 44577878999999874
Q ss_pred -----C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 -----G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -----g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++ .+.++++...++|.+++
T Consensus 381 ~f~~~~~iRis~~-~~~e~l~~~l~~l~~~l 410 (416)
T 1bw0_A 381 IFHAPGFTRLTTT-RPVEVYREAVERIKAFC 410 (416)
T ss_dssp GGTCTTEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence 2 99995 77888888888887765
No 65
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.50 E-value=2.3e-12 Score=126.49 Aligned_cols=221 Identities=13% Similarity=0.084 Sum_probs=159.4
Q ss_pred cCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCC
Q psy16707 142 VKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDC 221 (420)
Q Consensus 142 ~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~ 221 (420)
...+++..+...+ ...+.|||+.|. ...++++.|.+|...... ....|.+..| +++|+++++++ |.
T Consensus 15 ~~~~~~~~~~~~~---~~~~~i~l~~~~-----~~~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~-~~-- 80 (365)
T 3get_A 15 EPGKDIEVIAKEY---GVKEVIKLASNE-----NPFGTPPKAIECLRQNAN--KAHLYPDDSM-IELKSTLAQKY-KV-- 80 (365)
T ss_dssp CCCCCHHHHHHHT---TCSCCEECSSCC-----CTTCSCHHHHHHHHHHGG--GTTSCCCTTC-HHHHHHHHHHH-TC--
T ss_pred CCCCCHHHHHHhc---CCCceEEecCCC-----CCCCCCHHHHHHHHHHHH--hhccCCCCCh-HHHHHHHHHHh-CC--
Confidence 3345555555544 236899999996 224577888888777664 3678988777 99999999986 42
Q ss_pred ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---
Q psy16707 222 PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--- 298 (420)
Q Consensus 222 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--- 298 (420)
+++.| +.|.|||.++.+++..+ +.| ||+|++++|+|+.|...++..|++
T Consensus 81 ---~~~~v----------------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~ 132 (365)
T 3get_A 81 ---QNENI----------------------IIGAGSDQVIEFAIHSK--LNS-KNAFLQAGVTFAMYEIYAKQCGAKCYK 132 (365)
T ss_dssp ---CGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEECSSCCTHHHHHHHHHTCEEEE
T ss_pred ---CcceE----------------------EECCCHHHHHHHHHHHH--hCC-CCEEEEeCCChHHHHHHHHHcCCEEEE
Confidence 23444 66999999999988755 457 999999999999999887766542
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 133 v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 212 (365)
T 3get_A 133 TQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCEL 212 (365)
T ss_dssp CSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHH
T ss_pred EecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHH
Confidence
Q ss_pred ----------------------------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q psy16707 299 ----------------------------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRII 342 (420)
Q Consensus 299 ----------------------------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~ 342 (420)
..+ .+..| +++..++.++...|.+. +.++.++++++
T Consensus 213 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~ 284 (365)
T 3get_A 213 IKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPF-NVSNLALKAAVAAMDDD-------EFTEKTLENNF 284 (365)
T ss_dssp HHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCTT-CSCHHHHHHHHHHHTCH-------HHHHHHHHHHH
T ss_pred hccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcCCC-CcCHHHHHHHHHHhCCH-------HHHHHHHHHHH
Confidence 000 01122 35666666666666642 34566678999
Q ss_pred HHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHH-HHHHHhCCeEEeCCC-------cEEEcccCCCCHHHH
Q psy16707 343 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQV-EKLIKEHSVYLTKDG-------RISMAGVTSKNVGYL 411 (420)
Q Consensus 343 ~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v-~~Ll~e~~Vy~~p~g-------Ris~agl~~~ni~~l 411 (420)
++|+.+.+.|++.| +.. .++.|.|.|+.+ +.+.+ +.| .++||++.|+. |||++ +.++++++
T Consensus 285 ~~~~~l~~~l~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~iRis~~--~~~~i~~l 356 (365)
T 3get_A 285 SQMELYKEFAKKHN----IKI-IDSYTNFITYFFDEKNSTDLSEKL-LKKGIIIRNLKSYGLNAIRITIG--TSYENEKF 356 (365)
T ss_dssp HHHHHHHHHHHHTT----CEE-CCCSSSEEEEECSSSCHHHHHHHH-HTTTEECEECGGGTCSEEEEECC--CHHHHHHH
T ss_pred HHHHHHHHHHHhCC----CEE-CCCCCeEEEEECCCCCHHHHHHHH-HHCCEEEEECccCCCCEEEEEcC--CHHHHHHH
Confidence 99999999999986 443 456677888655 45554 555 57799999863 99987 77899999
Q ss_pred HHHHHHHhC
Q psy16707 412 AKAIHAVTK 420 (420)
Q Consensus 412 a~AI~~vv~ 420 (420)
.+++.++++
T Consensus 357 ~~~l~~~l~ 365 (365)
T 3get_A 357 FTEFDKILR 365 (365)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999864
No 66
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.50 E-value=7e-13 Score=130.65 Aligned_cols=218 Identities=10% Similarity=0.052 Sum_probs=155.1
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+.+.|||++|. ++ .++++.|.+|......+ ..+.|.+ |..++++++++++....+..+++++|
T Consensus 31 ~~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v--------- 93 (391)
T 4dq6_A 31 TNDLLPMWVAD---MD--FKAAPCIIDSLKNRLEQ-EIYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWL--------- 93 (391)
T ss_dssp CSCSEECCSSS---CS--SCCCHHHHHHHHHHHTT-CCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGE---------
T ss_pred CCCceeccccC---CC--CCCCHHHHHHHHHHHhC-CCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHe---------
Confidence 46899999995 33 46678888887776653 4567766 77999999999873221111234445
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|||.|+.+++..+ +.| ||+|++++|+|+.|...++..|++
T Consensus 94 -------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~ 157 (391)
T 4dq6_A 94 -------------IYSPGVIPAISLLINEL--TKA-NDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYED 157 (391)
T ss_dssp -------------EEESCHHHHHHHHHHHH--SCT-TCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHH
T ss_pred -------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHH
Confidence 56999999999988755 457 899999999999999887765431
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 158 l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~s 237 (391)
T 4dq6_A 158 IENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPT 237 (391)
T ss_dssp HHHHCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSH
T ss_pred HHHHhhcCCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEech
Confidence
Q ss_pred ----------------h-hhh------h--hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ----------------K-ILI------R--AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ 353 (420)
Q Consensus 299 ----------------~-~~~------r--~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~ 353 (420)
. .+. + ..+++++..++.++...|.+. .+ .++.++++++++|+.+.+.|+
T Consensus 238 K~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~---~~~~~~~~~~~~~~~l~~~l~ 311 (391)
T 4dq6_A 238 KTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ES---WLESFLEYLESNIDFAIKYIN 311 (391)
T ss_dssp HHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HH---HHHHHHHHHHHHHHHHHHHHH
Confidence 0 110 1 123355666666555544321 23 356667899999999999998
Q ss_pred hc--CCCCCCcccCCCCceEEecC-----CCH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHH
Q psy16707 354 KE--GSNKPWNHITDQIGMFCYTG-----LNA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 354 ~~--g~~~~w~~i~~q~GmF~~~~-----l~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI 415 (420)
+. | |..+.++.|+|.|+. .+. +.+++|++++||++.|+ + ||+++ .+.++++++.++|
T Consensus 312 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l 386 (391)
T 4dq6_A 312 ENMPK----LKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA-CPRSMLEEALIRI 386 (391)
T ss_dssp HHCTT----SEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-SCHHHHHHHHHHH
T ss_pred hhCCC----CEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-CCHHHHHHHHHHH
Confidence 74 4 777888889998753 344 45577877779999874 2 99998 6888899999999
Q ss_pred HHHhC
Q psy16707 416 HAVTK 420 (420)
Q Consensus 416 ~~vv~ 420 (420)
.++++
T Consensus 387 ~~~l~ 391 (391)
T 4dq6_A 387 KNAIN 391 (391)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 88764
No 67
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.49 E-value=6e-13 Score=129.84 Aligned_cols=211 Identities=15% Similarity=0.163 Sum_probs=155.2
Q ss_pred HHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeec
Q psy16707 154 FKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQ 233 (420)
Q Consensus 154 ~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~ 233 (420)
|....+.+.|||+.|. ...++++.|.+|...... ....| |..|.+++++++++++ |. +++.|
T Consensus 10 ~~~~~~~~~i~l~~~~-----~~~~~~~~v~~a~~~~~~--~~~~y-~~~~~~~l~~~la~~~-~~-----~~~~i---- 71 (354)
T 3ly1_A 10 FTAPSTDNPIRINFNE-----NPLGMSPKAQAAARDAVV--KANRY-AKNEILMLGNKLAAHH-QV-----EAPSI---- 71 (354)
T ss_dssp CCCCCSSSCEECSSCC-----CSSCCCHHHHHHHHHTGG--GTTSC-CHHHHHHHHHHHHHHT-TS-----CGGGE----
T ss_pred ccCCCCCceEEccCCC-----CCCCCCHHHHHHHHHHHh--hCcCC-CCCchHHHHHHHHHHh-CC-----ChHHE----
Confidence 3445567899999996 224577888888777654 35678 5668999999999976 42 23444
Q ss_pred ccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------
Q psy16707 234 GISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------- 298 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------- 298 (420)
+.|.|||+++.+++..+ +.| ||+|++++|+|++|...++..|++
T Consensus 72 ------------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~ 130 (354)
T 3ly1_A 72 ------------------LLTAGSSEGIRAAIEAY--ASL-EAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIE 130 (354)
T ss_dssp ------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHH
T ss_pred ------------------EEeCChHHHHHHHHHHH--hCC-CCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHH
Confidence 56999999999998765 457 899999999999999998888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 131 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 210 (354)
T 3ly1_A 131 GLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKT 210 (354)
T ss_dssp HHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEE
T ss_pred HHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEee
Confidence
Q ss_pred ----------------------hhhh-hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy16707 299 ----------------------KILI-RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE 355 (420)
Q Consensus 299 ----------------------~~~~-r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~ 355 (420)
..+. .....+++..++.++...|.+. +.++.++++++++|+.+.+.|++.
T Consensus 211 ~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~~~ 283 (354)
T 3ly1_A 211 FSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAALASMNDS-------AFITYSKKSNDVSRQILLKALEDL 283 (354)
T ss_dssp SSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhccChhhhheeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 0000 1112355677777777767642 345566689999999999999988
Q ss_pred CCCCCCcccCCCCceEEecCC--CHHHH-HHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 356 GSNKPWNHITDQIGMFCYTGL--NATQV-EKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 356 g~~~~w~~i~~q~GmF~~~~l--~~~~v-~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
| |..+ ++.|+|.|+.+ +.+++ +.| .++||++. + + |||++ +.++++++.++|.+++
T Consensus 284 ~----~~~~-~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l 349 (354)
T 3ly1_A 284 K----LPYL-PSEGNFVFHQLVVPLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG--TPQEMQWVADTMREFR 349 (354)
T ss_dssp T----CCBC-CCCSSEEEEECSSCHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred C----CeEC-CCCceEEEEECCCCHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHH
Confidence 7 4444 56788888766 45555 555 57899988 2 2 99986 6788999999999875
No 68
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.49 E-value=4.4e-13 Score=134.14 Aligned_cols=245 Identities=14% Similarity=0.151 Sum_probs=157.9
Q ss_pred chhhhccccCCChHHHH--HHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707 134 FQDARTSSVKVPSSNLL--TEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL 211 (420)
Q Consensus 134 ~~~~~~~~~~~d~i~~l--~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a 211 (420)
.+++ +..+..+.+..+ .....++ +.+.|||+.|..-. . .++.++.|.++......+ ....|.+..|.++++++
T Consensus 12 ~~~~-~~~~~~~~~~~~~~~~~~~~~-g~~~i~l~~~~~~~-~-~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~ 86 (406)
T 1xi9_A 12 ASKR-ALSVEYAIRDVVLPARELEKK-GIKVIRLNIGDPVK-F-DFQPPEHMKEAYCKAIKE-GHNYYGDSEGLPELRKA 86 (406)
T ss_dssp CCHH-HHTCCC-------CHHHHHHT-TCCCEECCCCCGGG-T-TCCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHH
T ss_pred HHHH-HhcCChhHHHHHHHHHHHHHc-CCCEEEecCCCCCc-C-CCCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHH
Confidence 3444 555565544443 3344333 56789999997311 0 124567777777665543 34589999999999999
Q ss_pred HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+++++....+...++++| +.|.|||.|+.+++..+ +.| ||.|++++|+|+.|...
T Consensus 87 la~~l~~~~g~~~~~~~v----------------------~~t~g~~~al~~~~~~l--~~~-gd~Vl~~~~~~~~~~~~ 141 (406)
T 1xi9_A 87 IVEREKRKNGVDITPDDV----------------------RVTAAVTEALQLIFGAL--LDP-GDEILVPGPSYPPYTGL 141 (406)
T ss_dssp HHHHHHHHHCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHH
T ss_pred HHHHHHHhcCCCCCHHHE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCCccHHHH
Confidence 999983211111234444 66999999999998765 457 89999999999999988
Q ss_pred HhhcCcc-------------------------------------------------------------------------
Q psy16707 292 CKHTGLE------------------------------------------------------------------------- 298 (420)
Q Consensus 292 ~~~aG~~------------------------------------------------------------------------- 298 (420)
++..|++
T Consensus 142 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~ 221 (406)
T 1xi9_A 142 VKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTY 221 (406)
T ss_dssp HHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBS
T ss_pred HHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccccc
Confidence 8877653
Q ss_pred ---------h--h---hh-hh---ccC------------CCc---------------------hHHHHHHHHHhCChhhH
Q psy16707 299 ---------K--I---LI-RA---FYS------------SPP---------------------IHGARIVQEILGDPKLK 327 (420)
Q Consensus 299 ---------~--~---~~-r~---~~s------------~pp---------------------~~ga~iv~~IL~dp~L~ 327 (420)
. . +. .+ .++ .++ ..++.++...|.
T Consensus 222 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~----- 296 (406)
T 1xi9_A 222 EGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLT----- 296 (406)
T ss_dssp SSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHH-----
T ss_pred CCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-----
Confidence 0 0 00 00 000 111 112222222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEec------CCCHH-HHHHHHHhCCeEEeCC----
Q psy16707 328 AQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYT------GLNAT-QVEKLIKEHSVYLTKD---- 395 (420)
Q Consensus 328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~------~l~~~-~v~~Ll~e~~Vy~~p~---- 395 (420)
.. .+.++.++++++++|+.+.+.|+++ | |..+.++.|+|.|+ +.+.+ .++.|++++||++.|+
T Consensus 297 ~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~ 371 (406)
T 1xi9_A 297 GP-MDYLKEYMKKLKERRDYIYKRLNEIPG----ISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFG 371 (406)
T ss_dssp SC-CHHHHHHHHHHHHHHHHHHHHHHTSTT----EECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGC
T ss_pred CC-cHHHHHHHHHHHHHHHHHHHHHHhCCC----CeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcC
Confidence 00 1236777899999999999999986 3 66667778999874 23444 4577877999999864
Q ss_pred ----C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 ----G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ----g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ |||++ .++++++.+.++|.+++
T Consensus 372 ~~~~~~lRis~~-~~~~~i~~~~~~l~~~l 400 (406)
T 1xi9_A 372 EYGAGHFRAVFL-PPIEILEEAMDRFEKFM 400 (406)
T ss_dssp GGGTTBEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEec-CCHHHHHHHHHHHHHHH
Confidence 2 99998 88888888888888764
No 69
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.49 E-value=3.1e-12 Score=125.72 Aligned_cols=209 Identities=16% Similarity=0.154 Sum_probs=153.2
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~ 236 (420)
+.+.|||+.|. + ..++++.|.+|......+. ....|.+ .|.++|++++++++ |. ++++|
T Consensus 25 ~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~-g~-----~~~~i------- 85 (360)
T 3hdo_A 25 IASWIKLNTNE---N--PYPPSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELY-GF-----DPSWI------- 85 (360)
T ss_dssp CTTSEECSSCC---C--SSCCCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHH-TC-----CGGGE-------
T ss_pred ccceeeccCCC---C--CCCCCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHh-Cc-----CcceE-------
Confidence 35789999996 2 3567788888877766431 1467754 47799999999987 42 34445
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.|||.|+.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 86 ---------------~~t~g~~~al~~~~~~l--~~~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~ 147 (360)
T 3hdo_A 86 ---------------IMANGSDEVLNNLIRAF--AAE-GEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRIAGFPER 147 (360)
T ss_dssp ---------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSBTTCCSS
T ss_pred ---------------EEcCCHHHHHHHHHHHH--hCC-CCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCHHHHHhh
Confidence 56999999999998755 457 899999999999999998888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 148 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 227 (360)
T 3hdo_A 148 YEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAI 227 (360)
T ss_dssp BCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEE
T ss_pred cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEe
Confidence
Q ss_pred ------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCce
Q psy16707 299 ------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM 370 (420)
Q Consensus 299 ------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~Gm 370 (420)
..+ .+.. .+++..++.++...|.+ .+| ++.++++++++|+.+.+.|++.| |.. .++.|.
T Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~----~~~---~~~~~~~~~~~~~~l~~~L~~~~----~~~-~~~~~~ 294 (360)
T 3hdo_A 228 ARPEVIAALDKIRDH-YNLDRLAQAACVAALRD----QAY---LSECCRRIRETREWFTTELRSIG----YDV-IPSQGN 294 (360)
T ss_dssp CCHHHHHHHHHHSCS-CCSCHHHHHHHHHHHHC----HHH---HHHHHHHHHHHHHHHHHHHHHTT----CEE-CCCSSS
T ss_pred eCHHHHHHHHHhCCC-CCCCHHHHHHHHHHhcC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----CEE-cCCCcc
Confidence 111 1222 34566777777766654 233 55666899999999999999886 554 456677
Q ss_pred EEecC---CCHHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 371 FCYTG---LNATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 371 F~~~~---l~~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv 419 (420)
|.|+. .+.+.+...+.++||++.+++ |||++ +.++++++.++++++.
T Consensus 295 ~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~ 352 (360)
T 3hdo_A 295 YLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIG 352 (360)
T ss_dssp EEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 77753 345555444568899998743 99987 7899999999999875
No 70
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.48 E-value=6.5e-13 Score=130.89 Aligned_cols=217 Identities=12% Similarity=0.101 Sum_probs=155.5
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+.+.||+++|. + ..++++.|.+|......+ ..+.|.+. ..++++++++++....+..++++.|
T Consensus 26 g~~~i~~~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i--------- 88 (391)
T 3dzz_A 26 KEKELPMWIAE---M--DFKIAPEIMASMEEKLKV-AAFGYESV--PAEYYKAVADWEEIEHRARPKEDWC--------- 88 (391)
T ss_dssp CTTCEECCSSC---C--SSCCCHHHHHHHHHHHTT-CCCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGE---------
T ss_pred CCCceeccccC---C--CCCCCHHHHHHHHHHHhc-CcCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHE---------
Confidence 34799999995 4 346778888888776653 56788876 7999999999883221111334445
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.|||.|+.+++..+ +.| ||+|++++|+|+.|...++..|++
T Consensus 89 -------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 152 (391)
T 3dzz_A 89 -------------VFASGVVPAISAMVRQF--TSP-GDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADL 152 (391)
T ss_dssp -------------EEESCHHHHHHHHHHHH--SCT-TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHH
T ss_pred -------------EECCCHHHHHHHHHHHh--CCC-CCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHH
Confidence 56999999999988765 457 999999999999999988877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 153 ~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~ 232 (391)
T 3dzz_A 153 EEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISP 232 (391)
T ss_dssp HHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECS
T ss_pred HHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeC
Confidence
Q ss_pred ----------------------hhhh----hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ----------------------KILI----RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL 352 (420)
Q Consensus 299 ----------------------~~~~----r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L 352 (420)
..+. .....+++..++.++...|.+. . +.++.++++++++|+.+.+.|
T Consensus 233 sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~---~~~~~~~~~~~~~~~~l~~~l 306 (391)
T 3dzz_A 233 SKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---H---DWLRELKQVLRDNFAYAREFL 306 (391)
T ss_dssp HHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---H---HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---H---HHHHHHHHHHHHHHHHHHHHH
Confidence 0000 1223345555555554444221 2 335666789999999999999
Q ss_pred Hhc--CCCCCCcccCCCCceEEecC-----CCHH-HHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHH
Q psy16707 353 QKE--GSNKPWNHITDQIGMFCYTG-----LNAT-QVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKA 414 (420)
Q Consensus 353 ~~~--g~~~~w~~i~~q~GmF~~~~-----l~~~-~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~A 414 (420)
++. | |....++.|+|.|+. .+.+ .+++|++++||++.|+. ||+++ .+.++++++.++
T Consensus 307 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~ 381 (391)
T 3dzz_A 307 AKEVPE----VKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CPKELVIDGMQR 381 (391)
T ss_dssp HHHCTT----SEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SCHHHHHHHHHH
T ss_pred HhhCCC----cEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHHHHHHHHH
Confidence 984 4 677788889988753 3444 45777779999998751 99998 688889998888
Q ss_pred HHHHh
Q psy16707 415 IHAVT 419 (420)
Q Consensus 415 I~~vv 419 (420)
|.+++
T Consensus 382 l~~~l 386 (391)
T 3dzz_A 382 LKQGV 386 (391)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88875
No 71
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.48 E-value=3.3e-13 Score=134.91 Aligned_cols=215 Identities=15% Similarity=0.194 Sum_probs=150.1
Q ss_pred cCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCCCCCCCCCCCHHHHHHHHHHHc-CCCCccccCCceee
Q psy16707 157 DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLDKEYAPIIGAPDFGKLAAQLAY-GEDCPQLKDNLISI 231 (420)
Q Consensus 157 d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~~~Y~p~~G~~~fr~a~~~~~~-g~~~~~~~~~~i~~ 231 (420)
.++.+.|||+.|. + .++.++.|.+|......+ ...+.|.|..|.++||+++++++. |. +++++|
T Consensus 30 ~~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~----~~~~~v-- 98 (400)
T 3asa_A 30 NPQHTVINLSIGD---T--TQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGF----VDAKEI-- 98 (400)
T ss_dssp CTTSCCEECSSCC---C--CCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTS----SCGGGE--
T ss_pred cCCCceEeccCCC---C--CCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCC----CCHHHE--
Confidence 4567899999996 2 235667777776655432 135689999999999999999874 31 234555
Q ss_pred ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------
Q psy16707 232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------- 298 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------- 298 (420)
+.|.|++.++.+++.++ .| ||.|++++|+|+.|...++..|++
T Consensus 99 --------------------~~~~G~~~al~~~~~~~---~~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 154 (400)
T 3asa_A 99 --------------------FISDGAKVDLFRLLSFF---GP-NQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF 154 (400)
T ss_dssp --------------------EEESCHHHHHHHHHHHH---CS-SCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTT
T ss_pred --------------------EEccChHHHHHHHHHHc---CC-CCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCc
Confidence 56999999999876543 47 899999999999999888766632
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 155 ~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 234 (400)
T 3asa_A 155 FPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSF 234 (400)
T ss_dssp CCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEEC
T ss_pred ccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecc
Confidence
Q ss_pred -----------------hhh-------h--------hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 -----------------KIL-------I--------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQ 346 (420)
Q Consensus 299 -----------------~~~-------~--------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~ 346 (420)
..+ + ...+++++..++.++..+|++ . +++.++++++++|+
T Consensus 235 sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-----~---~~~~~~~~~~~~~~ 306 (400)
T 3asa_A 235 SKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSI-----L---PQLEAIHYYRENSD 306 (400)
T ss_dssp CGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-----T---TTCHHHHHHHHHHH
T ss_pred hhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCc-----H---HHHHHHHHHHHHHH
Confidence 111 1 011234555555555444432 1 35566789999999
Q ss_pred HHHHHHHhcCCCCCCcccCCCCceEEecC-CC----H-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHH
Q psy16707 347 SLKDNLQKEGSNKPWNHITDQIGMFCYTG-LN----A-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGY 410 (420)
Q Consensus 347 ~l~~~L~~~g~~~~w~~i~~q~GmF~~~~-l~----~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~ 410 (420)
.+.+.|++.| +....++.|+|.|+. ++ . +.+++|++++||++.|+ + |||++ .+.++++.
T Consensus 307 ~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~ 381 (400)
T 3asa_A 307 LLRKALLATG----FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILA 381 (400)
T ss_dssp HHHHHHHHTT----CEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHH
T ss_pred HHHHHHHHCC----CeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHH
Confidence 9999999886 555556678999876 43 2 56688888899999874 2 88853 57778888
Q ss_pred HHHHHHHHh
Q psy16707 411 LAKAIHAVT 419 (420)
Q Consensus 411 la~AI~~vv 419 (420)
..++|.+++
T Consensus 382 ~l~~l~~~~ 390 (400)
T 3asa_A 382 ACERLQMAP 390 (400)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHHH
Confidence 888887664
No 72
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.47 E-value=2.4e-13 Score=136.22 Aligned_cols=125 Identities=42% Similarity=0.746 Sum_probs=118.0
Q ss_pred chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
+..+++.+.|..+++||..++.++...|.+++++.+|.++++.++++++..|+.|.+.|++.+.++.|..+..+.|||.+
T Consensus 283 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 362 (409)
T 4eu1_A 283 LVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAY 362 (409)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEE
T ss_pred HHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEE
Confidence 34567777889999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
.+++.+.+++|.++++|++.+.|||+++++++.+|++++++|.++
T Consensus 363 ~~~~~~~~~~ll~~~gv~v~p~~Ri~~~~~~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 363 TGLTREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHNV 407 (409)
T ss_dssp CCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHcCCEEEcCCCEEEEEecCHhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999876
No 73
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.46 E-value=1.6e-12 Score=127.59 Aligned_cols=213 Identities=12% Similarity=0.121 Sum_probs=154.9
Q ss_pred cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707 157 DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 157 d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~ 236 (420)
+...+.|||+.|. + ..++++.|.+|......+...+.|.+ .|.++|++++++++ |.. +++.|
T Consensus 27 ~~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~-g~~----~~~~i------- 88 (367)
T 3euc_A 27 PDSHGLVKLDAME---N--PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM-QVP----AGMEV------- 88 (367)
T ss_dssp CCCTTCEECCSSC---C--CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH-TCC----TTCEE-------
T ss_pred CCCCCeeEccCCC---C--CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh-CCC----CcceE-------
Confidence 3456889999996 2 23466777777766554323578865 58999999999986 431 23444
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.|||.++.+++..+ +.| ||+|++++|+|+.|...++..|++
T Consensus 89 ---------------~~~~g~t~a~~~~~~~~--~~~-gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 150 (367)
T 3euc_A 89 ---------------LLGNGSDEIISMLALAA--ARP-GAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAML 150 (367)
T ss_dssp ---------------EEEEHHHHHHHHHHHHT--CCT-TCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHH
T ss_pred ---------------EEcCCHHHHHHHHHHHH--cCC-CCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHH
Confidence 56999999999988754 457 899999999999999988888774
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 151 ~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 230 (367)
T 3euc_A 151 AAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGL 230 (367)
T ss_dssp HHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTS
T ss_pred HHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcc
Confidence
Q ss_pred ---------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC
Q psy16707 299 ---------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKP 360 (420)
Q Consensus 299 ---------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~ 360 (420)
..+ .+.. .+++..++.++...|.+ .+ .++.++++++++|+.+.+.|+++ |
T Consensus 231 ~G~r~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~----~~---~~~~~~~~~~~~~~~l~~~l~~~~g---- 298 (367)
T 3euc_A 231 AGIRLGYVAGDPQWLEQLDKVRPP-YNVNVLTEATALFALEH----VA---VLDEQAAQLRAERSRVAEGMAAHGG---- 298 (367)
T ss_dssp CSCCEEEEEECHHHHHHHGGGCCS-SCCCHHHHHHHHHHHTT----HH---HHHHHHHHHHHHHHHHHHHHHTSTT----
T ss_pred cccCceeeeeCHHHHHHHHHhCCC-CCCCHHHHHHHHHHhcC----HH---HHHHHHHHHHHHHHHHHHHHHhCCC----
Confidence 000 1112 23566677666666654 23 35566689999999999999987 4
Q ss_pred CcccCCCCceEEecCC-CHHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 361 WNHITDQIGMFCYTGL-NATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 361 w~~i~~q~GmF~~~~l-~~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
|. +.++.|+|.|+.+ +.+.+...+.++||++.+++ |||++ +.++++++.++|+++++
T Consensus 299 ~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 299 VT-VFPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp CE-ECCCSSSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred cE-ECCCCCeEEEEECCCHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHhc
Confidence 55 5567888988766 45555444578999998742 99987 78899999999999864
No 74
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.45 E-value=3.4e-12 Score=125.10 Aligned_cols=207 Identities=13% Similarity=0.071 Sum_probs=147.5
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
...+.|||+.|. + ..++++.|++|...... ....| |..|.+++++++++++ |. +++.|
T Consensus 30 ~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~--~~~~y-~~~~~~~lr~~la~~~-~~-----~~~~v-------- 87 (363)
T 3ffh_A 30 GLTKITKLSSNE---N--PLGTSKKVAAIQANSSV--ETEIY-PDGWASSLRKEVADFY-QL-----EEEEL-------- 87 (363)
T ss_dssp TCSCCEECSSCS---C--TTCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHH-TC-----CGGGE--------
T ss_pred CCCceEEccCCC---C--CCCCCHHHHHHHHHHHH--HhhcC-CCcchHHHHHHHHHHh-CC-----ChhhE--------
Confidence 346899999996 2 24567888888766432 34566 6679999999999987 32 23444
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
+.|.|||+++.+++..+ +.| ||+|++++|+|+.|...++..|++
T Consensus 88 --------------~~~~g~t~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~ 150 (363)
T 3ffh_A 88 --------------IFTAGVDELIELLTRVL--LDT-TTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLN 150 (363)
T ss_dssp --------------EEESSHHHHHHHHHHHH--CST-TCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHH
T ss_pred --------------EEeCCHHHHHHHHHHHH--ccC-CCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHH
Confidence 56999999999988755 457 999999999999999999888775
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 151 ~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 230 (363)
T 3ffh_A 151 AIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLA 230 (363)
T ss_dssp HCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCS
T ss_pred hcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCc
Confidence
Q ss_pred ----------hh------hhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCC
Q psy16707 299 ----------KI------LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQK-EGSNKPW 361 (420)
Q Consensus 299 ----------~~------~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~-~g~~~~w 361 (420)
.. ..+.. .+++..++.++...|.+ . +.++.++++++++|+.+.+.|++ .| +
T Consensus 231 G~r~G~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~----~---~~~~~~~~~~~~~~~~l~~~l~~~~g----~ 298 (363)
T 3ffh_A 231 SARVGYGIADKEIIRQLNIVRPP-FNTTSIGQKLAIEAIKD----Q---AFIGECRTSNANGIKQYEAFAKRFEK----V 298 (363)
T ss_dssp SCCCEEEEECHHHHHHHHHTCCS-CCCBHHHHHHHHHHHHC----H---HHHHHHHHHHHHHHHHHHHHHHHCTT----C
T ss_pred hhceeeeecCHHHHHHHHHhCCC-CCCCHHHHHHHHHHhcC----H---HHHHHHHHHHHHHHHHHHHHHhhCCC----c
Confidence 00 01122 24566667666665643 2 34556668999999999999998 66 5
Q ss_pred cccCCCCceEEecCC--CHHHH-HHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 362 NHITDQIGMFCYTGL--NATQV-EKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 362 ~~i~~q~GmF~~~~l--~~~~v-~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv 419 (420)
..+ ++.|.|.|+.+ +.+.+ +.| .++||++.++. ||+++ +.++++++.+++++++
T Consensus 299 ~~~-~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 299 KLY-PANGNFVLIDLGIEAGTIFSYL-EKNGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKLL 363 (363)
T ss_dssp EEC-CCCSSEEEEECSSCHHHHHHHH-HHTTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred eEC-CCCCeEEEEECCCCHHHHHHHH-HHCCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHhC
Confidence 544 55678888655 44444 555 57899998852 99987 7889999999998864
No 75
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.44 E-value=7.8e-13 Score=133.29 Aligned_cols=218 Identities=12% Similarity=0.066 Sum_probs=157.1
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+.+.||+++|. ++. +++|.|.+|.....++ ..+.|.+.. .++++++++++....+..++++.|
T Consensus 60 g~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~-~~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~~~v--------- 122 (421)
T 3l8a_A 60 NPELLQMWVAD---MDF--LPVPEIKEAIINYGRE-HIFGYNYFN--DDLYQAVIDWERKEHDYAVVKEDI--------- 122 (421)
T ss_dssp CTTCEECCSSC---CCS--CCCHHHHHHHHHHHHH-CCSSCBCCC--HHHHHHHHHHHHHHHCCCCCGGGE---------
T ss_pred CCCeeecccCC---CCC--CCCHHHHHHHHHHHhc-CCcCCCCCC--HHHHHHHHHHHHHHhCCCCCHHHE---------
Confidence 56899999994 444 5777888777766543 567887653 899999999983322111234445
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------- 298 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------- 298 (420)
+.|.||+.|+..++..+ ..| ||.|++++|+|+.|...++.+|.+
T Consensus 123 -------------~~~~g~~ea~~~a~~~~--~~~-gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 186 (421)
T 3l8a_A 123 -------------LFIDGVVPAISIALQAF--SEK-GDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQL 186 (421)
T ss_dssp -------------EEESCHHHHHHHHHHHH--SCT-EEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHH
T ss_pred -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHH
Confidence 56999999999998765 447 899999999999999888877654
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 187 e~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~ 266 (421)
T 3l8a_A 187 EKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSA 266 (421)
T ss_dssp HHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECS
T ss_pred HHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeC
Confidence
Q ss_pred ----------------------hhh----hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ----------------------KIL----IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL 352 (420)
Q Consensus 299 ----------------------~~~----~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L 352 (420)
..+ ....+++++..++.++...|.+ ..+| ++.++++++++|+.|.+.|
T Consensus 267 sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~---~~~~---~~~~~~~~~~~~~~l~~~L 340 (421)
T 3l8a_A 267 TKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQY---GKPW---LEELKTVIEGNIKLVIKEL 340 (421)
T ss_dssp HHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH---CHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc---cHHH---HHHHHHHHHHHHHHHHHHH
Confidence 000 0223445666666655554531 1344 4555689999999999999
Q ss_pred Hhc-CCCCCCcccCCCCceEEecCC-----C-HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHH
Q psy16707 353 QKE-GSNKPWNHITDQIGMFCYTGL-----N-ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 353 ~~~-g~~~~w~~i~~q~GmF~~~~l-----~-~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI 415 (420)
++. + +..+.++.+||.|+.+ + .+.++.|++++||++.|+ + |||++ .+.++|++..++|
T Consensus 341 ~~~~~----i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~i~~~l~~l 415 (421)
T 3l8a_A 341 EAKTK----IKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPKNTVQEALSRI 415 (421)
T ss_dssp HHHCS----CEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHH
T ss_pred HhCCC----ceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCHHHHHHHHHHH
Confidence 886 3 6777888888887643 3 356688888999999873 2 99998 6888999999999
Q ss_pred HHHhC
Q psy16707 416 HAVTK 420 (420)
Q Consensus 416 ~~vv~ 420 (420)
.++++
T Consensus 416 ~~~l~ 420 (421)
T 3l8a_A 416 ISVFG 420 (421)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 88763
No 76
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.41 E-value=8.1e-12 Score=124.02 Aligned_cols=213 Identities=12% Similarity=0.073 Sum_probs=149.9
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~ 236 (420)
.+.|||+.|. + ..++++.|.+|......+ ....|.+. .++|++++++++ +|.+ +++++|
T Consensus 31 ~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~l~~~la~~l~~~~g~~---~~~~~v------- 92 (399)
T 1c7n_A 31 NEVVPLSVAD---M--EFKNPPELIEGLKKYLDE-TVLGYTGP--TEEYKKTVKKWMKDRHQWD---IQTDWI------- 92 (399)
T ss_dssp TTCCCCCSSS---C--SSCCCHHHHHHHHHHHHH-CCCSSBCC--CHHHHHHHHHHHHHHHCCC---CCGGGE-------
T ss_pred CCceeeeecC---C--CCCCCHHHHHHHHHHHhc-CCCCCCCC--cHHHHHHHHHHHHHHhCCC---CChhhE-------
Confidence 4789999996 2 245677888887776543 45688764 999999999997 4532 234444
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.|||+|+.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 93 ---------------~~t~g~~~a~~~~~~~l--~~~-gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~ 154 (399)
T 1c7n_A 93 ---------------INTAGVVPAVFNAVREF--TKP-GDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQ 154 (399)
T ss_dssp ---------------EEESSHHHHHHHHHHHH--CCT-TCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHH
T ss_pred ---------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHH
Confidence 67999999999998765 457 899999999999999888766543
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 155 ~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 234 (399)
T 1c7n_A 155 KLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFT 234 (399)
T ss_dssp HHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEE
T ss_pred HHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEE
Confidence
Q ss_pred --------------------hhhh------hhc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 --------------------KILI------RAF--YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKD 350 (420)
Q Consensus 299 --------------------~~~~------r~~--~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~ 350 (420)
..++ +.. +++++..++.++...|.+. .+.++.++++++++|+.+.+
T Consensus 235 s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~ 308 (399)
T 1c7n_A 235 APSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC------GKWLDGCIKVIDKNQRIVKD 308 (399)
T ss_dssp CSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHH
T ss_pred eChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHH
Confidence 0010 111 2345666666555544311 23456667899999999999
Q ss_pred HHHh-c-CCCCCCcccCCCCceEEecCC-----CHH-HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHH
Q psy16707 351 NLQK-E-GSNKPWNHITDQIGMFCYTGL-----NAT-QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLA 412 (420)
Q Consensus 351 ~L~~-~-g~~~~w~~i~~q~GmF~~~~l-----~~~-~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la 412 (420)
.|++ + | |..+.++.|+|.|+.+ +.+ .++.|++++||++.|+ + |||++.. .+++++..
T Consensus 309 ~L~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~-~~~l~~~l 383 (399)
T 1c7n_A 309 FFEVNHPE----IKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP-SSVIQESL 383 (399)
T ss_dssp HHHHHCTT----SBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC-HHHHHHHH
T ss_pred HHHhhCCC----CeEecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC-HHHHHHHH
Confidence 9987 4 4 6667778888887533 444 5577777899999874 2 9999854 66777777
Q ss_pred HHHHHHh
Q psy16707 413 KAIHAVT 419 (420)
Q Consensus 413 ~AI~~vv 419 (420)
++|.+++
T Consensus 384 ~~l~~~l 390 (399)
T 1c7n_A 384 ERLNKAL 390 (399)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 77
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.39 E-value=6.4e-12 Score=126.51 Aligned_cols=221 Identities=16% Similarity=0.253 Sum_probs=151.9
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHc---------c-CCCCCCCCCCCCHHHHHHHHHHHc---CCCCccccC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLN---------K-NLDKEYAPIIGAPDFGKLAAQLAY---GEDCPQLKD 226 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~---------~-~~~~~Y~p~~G~~~fr~a~~~~~~---g~~~~~~~~ 226 (420)
...|||+.+. .+..++.|.++...... . .....|.+..|.++|++++++++- |...+ +++
T Consensus 36 ~~~i~l~~~~------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~-~~~ 108 (428)
T 1iay_A 36 NGVIQMGLAE------NQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVR-FDP 108 (428)
T ss_dssp TSBEECSSCC------CCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSC-CCT
T ss_pred Cceeeecccc------chhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCC-CCh
Confidence 3578888664 35556788877664211 0 013689988999999999999983 32211 234
Q ss_pred CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh-hcCcc-------
Q psy16707 227 NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK-HTGLE------- 298 (420)
Q Consensus 227 ~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~-~aG~~------- 298 (420)
++| +.|.|||+++.+++..+ +.| ||.|++++|+|+.|...+. ..|++
T Consensus 109 ~~i----------------------~~~~G~~~ai~~~~~~~--~~~-gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~ 163 (428)
T 1iay_A 109 ERV----------------------VMAGGATGANETIIFCL--ADP-GDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCE 163 (428)
T ss_dssp TSC----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEESSCCTTHHHHTTTTTCCEEEEECCC
T ss_pred hhE----------------------EEccChHHHHHHHHHHh--CCC-CCeEEEccCCCcchHHHHHHhcCCEEEEeecC
Confidence 445 56999999999988755 457 8999999999999976442 33331
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 164 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~ 243 (428)
T 1iay_A 164 SSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSI 243 (428)
T ss_dssp TTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCH
T ss_pred CccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCH
Confidence
Q ss_pred -----h--------h--h-h-----------------------------h-hccCCCchHHHHHHHHHhCChhhHHHHHH
Q psy16707 299 -----K--------I--L-I-----------------------------R-AFYSSPPIHGARIVQEILGDPKLKAQWLT 332 (420)
Q Consensus 299 -----~--------~--~-~-----------------------------r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~ 332 (420)
. . + + + ..+.+++..++.++..+|.+.++ +.+
T Consensus 244 ~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~ 320 (428)
T 1iay_A 244 AEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKF---VDN 320 (428)
T ss_dssp HHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHH---HHH
T ss_pred HHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHH---HHH
Confidence 0 0 0 0 0 01123344555555555665321 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------H-HHHHHHHHhCCeEEeCC------
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------A-TQVEKLIKEHSVYLTKD------ 395 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~-~~v~~Ll~e~~Vy~~p~------ 395 (420)
.++.++++++++|+.|.+.|+++| |..+..+.|+|.|+.++ . +..++|++++||++.|+
T Consensus 321 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~ 396 (428)
T 1iay_A 321 FLRESAMRLGKRHKHFTNGLEVVG----IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQ 396 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCC
Confidence 566777999999999999999986 55566668999987553 2 34578877789999873
Q ss_pred --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 396 --G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+ ||+++..+.++++++.++|.+++
T Consensus 397 ~~~~iRis~~~~~~e~i~~~~~~l~~~l 424 (428)
T 1iay_A 397 EPGWFRVCFANMDDGTVDIALARIRRFV 424 (428)
T ss_dssp SSSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 2 99998788899999999998875
No 78
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.38 E-value=9.4e-12 Score=122.85 Aligned_cols=209 Identities=13% Similarity=0.128 Sum_probs=147.8
Q ss_pred ceeecccccccCCCCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccC
Q psy16707 162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~ 236 (420)
+|||+.|.+ ..++++.|.+|.....++ ...+.|.+..| +++++++++++ +|.. .+++.|
T Consensus 32 ~idl~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~---~~~~~v------- 95 (369)
T 3cq5_A 32 DIRLNTNEN-----PYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVA---VTRDNL------- 95 (369)
T ss_dssp SEECSSCCC-----CSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCC---CCGGGE-------
T ss_pred ceeccCCCC-----CCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCC---CChHhE-------
Confidence 499999973 234566676666655432 12568877766 89999999997 3322 224444
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.||++++.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 96 ---------------~~~~G~~~al~~~~~~l--~~~-gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 157 (369)
T 3cq5_A 96 ---------------WAANGSNEILQQLLQAF--GGP-GRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVAL 157 (369)
T ss_dssp ---------------EEESHHHHHHHHHHHHH--CST-TCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHH
T ss_pred ---------------EECCChHHHHHHHHHHh--cCC-CCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHH
Confidence 56999999999888755 457 899999999999999888887764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 158 ~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 237 (369)
T 3cq5_A 158 EEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAG 237 (369)
T ss_dssp HHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGG
T ss_pred HHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcc
Confidence
Q ss_pred ---------h----hh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707 299 ---------K----IL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH 363 (420)
Q Consensus 299 ---------~----~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~ 363 (420)
. .+ .+..| +++..++.++...|.+ . +.++.++++++++|+.+.+.|++.| |..
T Consensus 238 ~r~G~~~~~~~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~----~---~~~~~~~~~~~~~~~~l~~~L~~~g----~~~ 305 (369)
T 3cq5_A 238 GRLGYFVANPAFIDAVMLVRLPY-HLSALSQAAAIVALRH----S---ADTLGTVEKLSVERVRVAARLEELG----YAV 305 (369)
T ss_dssp GCCEEEEECTHHHHHHHTTSCTT-CSCHHHHHHHHHHHHT----H---HHHHTHHHHHHHHHHHHHHHHHHHT----CEE
T ss_pred cceEEEEeCHHHHHHHHHcCCCC-CCCHHHHHHHHHHhcC----H---HHHHHHHHHHHHHHHHHHHHHHhCC----CEE
Confidence 0 00 01122 3555666656555543 1 3456677899999999999999876 554
Q ss_pred cCCCCceEEecCC--CHHHH-HHHHHhCCeEEeCCC-----cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707 364 ITDQIGMFCYTGL--NATQV-EKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 364 i~~q~GmF~~~~l--~~~~v-~~Ll~e~~Vy~~p~g-----Ris~agl~~~ni~~la~AI~~vv~ 420 (420)
. ++.|+|.|+.+ +.+.+ +.| .++||++.|+| ||+++ ++++++++.+++.++++
T Consensus 306 ~-~~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~~~~~iRis~~--~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 306 V-PSESNFVFFGDFSDQHAAWQAF-LDRGVLIRDVGIAGHLRTTIG--VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp E-CCSSSEEEEECCSSHHHHHHHH-HHTTEECBCCSCTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred C-CCCCeEEEEECCCCHHHHHHHH-HHCCEEEEECCCCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 4 56678887654 44444 555 68999999863 99987 67889999999998753
No 79
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.37 E-value=1.1e-11 Score=121.94 Aligned_cols=185 Identities=18% Similarity=0.152 Sum_probs=136.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707 195 LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG 274 (420)
Q Consensus 195 ~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~ 274 (420)
....|.+..|.++|++++++++.+. .++.| +.|.|||.|+.+++..+ +.|
T Consensus 55 ~~~~y~~~~g~~~l~~~la~~~~~~-----~~~~v----------------------~~~~g~~~a~~~~~~~l--~~~- 104 (375)
T 3op7_A 55 TKLNYGWIEGSPAFKKSVSQLYTGV-----KPEQI----------------------LQTNGATGANLLVLYSL--IEP- 104 (375)
T ss_dssp SCCSSCCTTCCHHHHHHHHTTSSSC-----CGGGE----------------------EEESHHHHHHHHHHHHH--CCT-
T ss_pred CCcCCCCCCChHHHHHHHHHHhccC-----ChhhE----------------------EEcCChHHHHHHHHHHh--cCC-
Confidence 5678999999999999999976322 23444 66999999999998755 457
Q ss_pred CCEEEEcCCCCCCcHHHHhhcCcc--------------------------------------------------------
Q psy16707 275 EKVIYVPTPTWGNHIPICKHTGLE-------------------------------------------------------- 298 (420)
Q Consensus 275 gd~VlvpdP~w~ny~~i~~~aG~~-------------------------------------------------------- 298 (420)
||+|++++|+|+.+...++..|++
T Consensus 105 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~ 184 (375)
T 3op7_A 105 GDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIAS 184 (375)
T ss_dssp TCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999998888764
Q ss_pred ------------------------------------------------------------hhhhhhccCCCchHHHHHHH
Q psy16707 299 ------------------------------------------------------------KILIRAFYSSPPIHGARIVQ 318 (420)
Q Consensus 299 ------------------------------------------------------------~~~~r~~~s~pp~~ga~iv~ 318 (420)
....+....+++...+.++.
T Consensus 185 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 264 (375)
T 3op7_A 185 EVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQ 264 (375)
T ss_dssp TTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHH
T ss_pred HcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHH
Confidence 11112223344566666555
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC----CC-HHHHHHHHHhCCeEEe
Q psy16707 319 EILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG----LN-ATQVEKLIKEHSVYLT 393 (420)
Q Consensus 319 ~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~----l~-~~~v~~Ll~e~~Vy~~ 393 (420)
..|. .+.+.++.++++++++++.+.+.|++.+. +....++.|+|.|+. .+ .+++++|++++||.+.
T Consensus 265 ~~l~------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 335 (375)
T 3op7_A 265 LALA------HYQEILERNRHILEENLAILDQWIEEEPL---VSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLV 335 (375)
T ss_dssp HHHH------THHHHHHHHHHHHHHHHHHHHHHHHHCTT---EEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECE
T ss_pred HHHh------ccHHHHHHHHHHHHHHHHHHHHHHhhCCC---ceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEe
Confidence 5443 23455677778999999999999988521 556677888877642 33 3566888899999998
Q ss_pred CCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 394 KDG--------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 394 p~g--------Ris~agl~~~ni~~la~AI~~vv 419 (420)
|+. ||+++.. .++++...++|.+++
T Consensus 336 ~g~~~~~~~~iRi~~~~~-~~~i~~~l~~l~~~l 368 (375)
T 3op7_A 336 PGNRFERDGYVRLGFACE-QETLIKGLEKLSQFL 368 (375)
T ss_dssp EGGGGTCTTEEEECCCSC-HHHHHHHHHHHHHHH
T ss_pred ChhhhCCCCeEEEEecCC-HHHHHHHHHHHHHHH
Confidence 752 9998854 477888888887765
No 80
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.35 E-value=7.4e-12 Score=123.98 Aligned_cols=123 Identities=44% Similarity=0.687 Sum_probs=114.2
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
++++...|..+++||..+..+++..|.++.|+.+|.++++.++++++..|+.|.+.|++...++.|.....+.|+|.+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 3fsl_A 274 GQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTG 353 (397)
T ss_dssp HHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECC
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecC
Confidence 45566678899999999999999999999999999999999999999999999999999876667888888999999999
Q ss_pred CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
++.+++..+.++++|++.+.||||++++++.+|++++++|.++
T Consensus 354 ~~~~~~~~~l~~~gi~v~~g~Ris~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 354 LSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp CCHHHHHHHHHTTCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEECCCCeEEEEecCHhhHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999875
No 81
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.33 E-value=6.1e-12 Score=122.91 Aligned_cols=205 Identities=13% Similarity=0.081 Sum_probs=145.0
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.|||+.|. ...++++.|.+|...... ....|.+..| ++||+++++++ |. +++.|
T Consensus 15 ~~~id~~~~~-----~~~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~-~~-----~~~~i---------- 70 (350)
T 3fkd_A 15 SEIVNFSTTV-----WTDGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN-SV-----DNNAI---------- 70 (350)
T ss_dssp -CCEECSCCS-----CCCSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT-TC-----CGGGE----------
T ss_pred ccEEEccCCC-----CCCCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh-Cc-----CHHHE----------
Confidence 6789999996 224567778777766542 4578988877 99999999976 42 24445
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.|||.++.+++..+ . ||+|++++|+|+.|...++..|++
T Consensus 71 ------------~~t~g~~~al~~~~~~l----~-gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~v 133 (350)
T 3fkd_A 71 ------------LVTNGPTAAFYQIAQAF----R-GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADFSNMDFC 133 (350)
T ss_dssp ------------EEESHHHHHHHHHHHHT----T-TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCCTTCSEE
T ss_pred ------------EEcCCHHHHHHHHHHHH----C-CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCccCCCCEE
Confidence 66999999999988754 2 799999999999999998888764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 134 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~ 213 (350)
T 3fkd_A 134 WLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK 213 (350)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH
T ss_pred EEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH
Confidence
Q ss_pred ---hhhh-hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEe
Q psy16707 299 ---KILI-RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCY 373 (420)
Q Consensus 299 ---~~~~-r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~ 373 (420)
..+. .....+++..++.++...|.+.. .|.+.++. .+ ++|+.+.+.|+++ | +.. .++.|+|.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~---~~-~~~~~l~~~L~~~~~----~~~-~~~~~~~~~ 281 (350)
T 3fkd_A 214 DFMKRVAAFSTPWAVNALAIEAAKFILIHPA---QFTLPIRK---WQ-RNTVDFITALNRLDG----VEV-HPSGTTFFL 281 (350)
T ss_dssp HHHHHHHTTCCTTCSCHHHHHHHHHHHHCTT---TTCCCHHH---HH-HHHHHHHHHHHHSTT----EEE-CCCSSSEEE
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHhCHH---HHHHHHHH---HH-HHHHHHHHHHhcCCC----cEE-CCCCCcEEE
Confidence 1111 11223567778877777776532 35444443 23 7788899999887 4 444 455677776
Q ss_pred cCC---CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 374 TGL---NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 374 ~~l---~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
+.+ +. +.+++|++++||++.|+ + |||++ +.+.++.+.++++++.
T Consensus 282 ~~~~~~~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 339 (350)
T 3fkd_A 282 LRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFL 339 (350)
T ss_dssp EEESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHH
Confidence 433 33 55677876699999875 1 99886 5677899999999875
No 82
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.32 E-value=2.9e-11 Score=119.82 Aligned_cols=213 Identities=11% Similarity=0.030 Sum_probs=142.9
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHH-HHHHHHHHH---cCCCCccccCCceeeeccc
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPD-FGKLAAQLA---YGEDCPQLKDNLISIVQGI 235 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~-fr~a~~~~~---~g~~~~~~~~~~i~~~~~~ 235 (420)
++.|||++|. . ...+++.|.+|.....+. ....|.+. .++ +|+++++++ +|.. .++++|
T Consensus 28 ~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~~lr~~la~~l~~~~g~~---~~~~~v------ 90 (390)
T 1d2f_A 28 ADLLPFTISD---M--DFATAPCIIEALNQRLMH-GVFGYSRW--KNDEFLAAIAHWFSTQHYTA---IDSQTV------ 90 (390)
T ss_dssp --CEECCSSS---C--SSCCCHHHHHHHHHHHTT-CCCCCCCS--CCHHHHHHHHHHHHHHSCCC---CCGGGE------
T ss_pred CCeeEeeecC---C--CCCCCHHHHHHHHHHHhC-CCCCCCCC--ChHHHHHHHHHHHHHhcCCC---CCHHHE------
Confidence 4689999996 2 245678888887776643 45688775 788 999999998 3432 234445
Q ss_pred CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-----------------
Q psy16707 236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------------- 298 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------------- 298 (420)
+.|.|||.++.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 91 ----------------~~t~g~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 151 (390)
T 1d2f_A 91 ----------------VYGPSVIYMVSELIRQW--SET-GEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDM 151 (390)
T ss_dssp ----------------EEESCHHHHHHHHHHHS--SCT-TCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCH
T ss_pred ----------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCH
Confidence 66999999999988755 457 899999999999999888766542
Q ss_pred ------------------------------------------------------------------hhh-------h---
Q psy16707 299 ------------------------------------------------------------------KIL-------I--- 302 (420)
Q Consensus 299 ------------------------------------------------------------------~~~-------~--- 302 (420)
..+ +
T Consensus 152 ~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~~s~ 231 (390)
T 1d2f_A 152 GKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSG 231 (390)
T ss_dssp HHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECS
T ss_pred HHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhhccCc
Confidence 000 0
Q ss_pred ----------------------------h---hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 303 ----------------------------R---AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDN 351 (420)
Q Consensus 303 ----------------------------r---~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~ 351 (420)
+ ..+++++..++.++...|.+ ..+.++.++++++++|+.+.+.
T Consensus 232 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~l~~~ 305 (390)
T 1d2f_A 232 SKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ------GAPWLDALRIYLKDNLTYIADK 305 (390)
T ss_dssp HHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01223333333333322221 1234566778999999999999
Q ss_pred HHh-c-CCCCCCcccCCCCceEEecC-----CCHH-HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHH
Q psy16707 352 LQK-E-GSNKPWNHITDQIGMFCYTG-----LNAT-QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAK 413 (420)
Q Consensus 352 L~~-~-g~~~~w~~i~~q~GmF~~~~-----l~~~-~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~ 413 (420)
|++ + | |....++.|+|.|+. .+.+ .++.|++++||++.|+ + |||++. ++++++...+
T Consensus 306 L~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~ 380 (390)
T 1d2f_A 306 MNAAFPE----LNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVA 380 (390)
T ss_dssp HHHHCSS----CCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHH
T ss_pred HHhhCCC----CEEecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHH
Confidence 988 4 4 565677778887753 3444 4577766899999874 2 999985 5566776666
Q ss_pred HHHHHh
Q psy16707 414 AIHAVT 419 (420)
Q Consensus 414 AI~~vv 419 (420)
+|.+++
T Consensus 381 ~l~~~l 386 (390)
T 1d2f_A 381 GLINAI 386 (390)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 83
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.28 E-value=5.4e-11 Score=117.33 Aligned_cols=201 Identities=17% Similarity=0.185 Sum_probs=144.8
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS 240 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 240 (420)
+.|||+.|+ ++-| +++.| + + .....|++. +.+++|+++++++ |. ++++|
T Consensus 30 ~~i~l~~~~--~~~~---~~~~v--a---~---~~~~~Y~~~-~~~~lr~~la~~~-~~-----~~~~v----------- 78 (356)
T 1fg7_A 30 GDVWLNANE--YPTA---VEFQL--T---Q---QTLNRYPEC-QPKAVIENYAQYA-GV-----KPEQV----------- 78 (356)
T ss_dssp CSEECSSCC--CSSC---CCCCC--C---C---CCTTSCCCS-SCHHHHHHHHHHH-TS-----CGGGE-----------
T ss_pred ceEEeeCCC--CCCC---CCHhH--h---h---hhhccCCCc-cHHHHHHHHHHHh-CC-----ChHHE-----------
Confidence 679999997 3333 23334 1 1 245789765 6999999999987 32 23445
Q ss_pred cccccccccceeecccchHHHHHHHHHHHhcCCCC-CEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-KVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-d~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.||++++.+++..+ +.| | |+|++++|+|+.|...++..|++
T Consensus 79 -----------~~~~G~~~ai~~~~~~~--~~~-g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 144 (356)
T 1fg7_A 79 -----------LVSRGADEGIELLIRAF--CEP-GKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKL 144 (356)
T ss_dssp -----------EEESHHHHHHHHHHHHH--CCT-TTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSC
T ss_pred -----------EEcCCHHHHHHHHHHHH--hCC-CCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHh
Confidence 56999999999988755 457 8 99999999999999888877664
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 145 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 224 (356)
T 1fg7_A 145 DGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCG 224 (356)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCE
T ss_pred cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhE
Confidence
Q ss_pred ---------h--hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC
Q psy16707 299 ---------K--ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ 367 (420)
Q Consensus 299 ---------~--~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q 367 (420)
. ...+..| +++..++.++...|.+. .| +.++.++++++++|+.+.+.|+++|. +..+.+.
T Consensus 225 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~~----~~-~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~ 295 (356)
T 1fg7_A 225 FTLANEEVINLLMKVIAPY-PLSTPVADIAAQALSPQ----GI-VAMRERVAQIIAEREYLIAALKEIPC---VEQVFDS 295 (356)
T ss_dssp EEEECHHHHHHHHHHSCSS-CSCHHHHHHHHHHTSHH----HH-HHHHHHHHHHHHHHHHHHHHHHHSTT---EEEECCC
T ss_pred EEEeCHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcCc----cH-HHHHHHHHHHHHHHHHHHHHHHhCCC---ceEECCC
Confidence 1 1113344 56777787777767642 23 24677779999999999999998751 2234566
Q ss_pred CceEEecCC-CHH-HHHHHHHhCCeEEeC-C------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707 368 IGMFCYTGL-NAT-QVEKLIKEHSVYLTK-D------G--RISMAGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 368 ~GmF~~~~l-~~~-~v~~Ll~e~~Vy~~p-~------g--Ris~agl~~~ni~~la~AI~~v 418 (420)
.|+|.|+.+ +.+ .+++| .++||++.| + + |||++ +.++++++.++++++
T Consensus 296 ~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~--~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 296 ETNYILARFKASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG--TREESQRVIDALRAE 354 (356)
T ss_dssp SSSEEEEEETTHHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHTC
T ss_pred CCeEEEEECCCHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence 789998755 444 45666 799999988 4 2 99987 568899999998875
No 84
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.28 E-value=2.5e-11 Score=128.23 Aligned_cols=102 Identities=11% Similarity=-0.008 Sum_probs=71.3
Q ss_pred ceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCC----CCccccCCceeeecccCC
Q psy16707 162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGE----DCPQLKDNLISIVQGISG 237 (420)
Q Consensus 162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~----~~~~~~~~~i~~~~~~~~ 237 (420)
.|||++|. + + .+++..++++.+.+. ...|.+..|.+++|+++++.++.. ..+...++.|
T Consensus 106 ~i~l~~g~---~-~-~~~~~~~~al~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I-------- 168 (546)
T 2zy4_A 106 SLSYVRDQ---L-G-LDPAAFLHEMVDGIL----GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNL-------- 168 (546)
T ss_dssp HHHHHHHT---S-C-CCHHHHHHHHHHHHH----TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEE--------
T ss_pred hhecccCC---C-C-CCChHHHHHHHHhhh----cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceE--------
Confidence 78999996 3 2 344555554444432 368999999999999988876422 1100123334
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHH---hcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLK---NFFPGEKVIYVPTPTWGNHIPICKHT 295 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~---~~~p~gd~VlvpdP~w~ny~~i~~~a 295 (420)
+.|.|+++++.+++..+. .+.| ||+|++++|+|+.|.......
T Consensus 169 --------------~~t~G~~eal~~~~~~l~~~~l~~~-Gd~Vlv~~P~y~~~~~~~~~~ 214 (546)
T 2zy4_A 169 --------------FAVEGGTAAMAYIFESLKLNGLLKA-GDKVAIGMPVFTPYIEIPELA 214 (546)
T ss_dssp --------------EEEEHHHHHHHHHHHHHHHTTSSCT-TCEEEEEESCCHHHHHHHHST
T ss_pred --------------EEECCHHHHHHHHHHHhhhhhcCCC-CCEEEEeCCCCccHHHHHHHc
Confidence 679999999999887542 2457 999999999999999876544
No 85
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.26 E-value=9e-11 Score=114.26 Aligned_cols=206 Identities=15% Similarity=0.181 Sum_probs=142.8
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
++.|||..|.. ..++++.|.+|......+...+.|.+ .|.+++|+++++++-.. .++++.|
T Consensus 19 ~~~i~l~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v---------- 79 (335)
T 1uu1_A 19 RDKTYLALNEN-----PFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNV---------- 79 (335)
T ss_dssp CCSEEESSCCC-----SSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGE----------
T ss_pred CcceECCCCCC-----CCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHE----------
Confidence 46799999972 23467788887776542223567854 58999999999987432 1234444
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.||++++.+++..+ ||.|+++ |+|+.|...++..|++
T Consensus 80 ------------~~~~G~~~al~~~~~~~------gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~ 140 (335)
T 1uu1_A 80 ------------SVGNGADEIIYVMMLMF------DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGD 140 (335)
T ss_dssp ------------EEESSHHHHHHHHHHHS------SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCCCTTE
T ss_pred ------------EEcCChHHHHHHHHHHh------CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHcCCCC
Confidence 56999999999987633 6899999 9999999887766653
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 141 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 220 (335)
T 1uu1_A 141 VVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKF 220 (335)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHTTCEEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHH
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCEEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHH
Confidence
Q ss_pred -hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC
Q psy16707 299 -KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 375 (420)
Q Consensus 299 -~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~ 375 (420)
..+ .+..| +++..++.++...|.+ .+| ++.++++++++|+.+.+.|++.| |.. .++.|+|.|+.
T Consensus 221 ~~~l~~~~~~~-~~~~~~~~~~~~~l~~----~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~-~~~~~~~~~~~ 287 (335)
T 1uu1_A 221 IDAYNRVRLPF-NVSYVSQMFAKVALDH----REI---FEERTKFIVEERERMKSALREMG----YRI-TDSRGNFVFVF 287 (335)
T ss_dssp HHHHHHHSCTT-CSCHHHHHHHHHHHHT----HHH---HHHHHHHHHHHHHHHHHHHHHHT----CCB-CCCCSSEEEEE
T ss_pred HHHHHHhcCCC-CcCHHHHHHHHHHhCC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----cEE-cCCCCeEEEEE
Confidence 111 12223 5667777777766643 123 45566889999999999999886 443 45678888876
Q ss_pred CC---H-HHHHHHHHhCCeEEeCC-C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 376 LN---A-TQVEKLIKEHSVYLTKD-G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 376 l~---~-~~v~~Ll~e~~Vy~~p~-g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
++ . +..+.|. ++||++.|+ + |||++. .+.++.+.+++.+++
T Consensus 288 ~~~~~~~~~~~~l~-~~gi~v~~~~~~iRis~~~--~~~i~~~~~~l~~~~ 335 (335)
T 1uu1_A 288 MEKEEKERLLEHLR-TKNVAVRSFREGVRITIGK--REENDMILRELEVFK 335 (335)
T ss_dssp CCTHHHHHHHHHHH-HHTEEEEEETTEEEEECCC--HHHHHHHHHHHHCC-
T ss_pred CCCCCHHHHHHHHH-HCCEEEEECCCeEEEEeCC--HHHHHHHHHHHHhhC
Confidence 64 2 3446665 679999873 2 999864 456888888887653
No 86
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.23 E-value=1e-10 Score=114.13 Aligned_cols=205 Identities=13% Similarity=0.141 Sum_probs=141.9
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
.+.+.|||+.|. + ..++++.|.+|......+ ...| |..|.+++++++++++ +. +++.|
T Consensus 24 ~~~~~idl~~~~---~--~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~-~~-----~~~~i-------- 81 (361)
T 3ftb_A 24 KGRELLDYSSNI---N--PLGIPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYL-KL-----KDIGI-------- 81 (361)
T ss_dssp ----CEETTCCC---C--TTCSCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHH-TC-----CSCEE--------
T ss_pred CCCCEEEecCCC---C--CCCCCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHh-CC-----CcceE--------
Confidence 456789999996 2 234567787777666543 4677 5689999999999987 32 23444
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------- 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------- 298 (420)
+.|.|||+|+.+++..+ |.|++++|+|+.|...++..|++
T Consensus 82 --------------~~~~g~t~al~~~~~~~-------d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~ 140 (361)
T 3ftb_A 82 --------------VLGNGASEIIELSISLF-------EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIIS 140 (361)
T ss_dssp --------------EEESSHHHHHHHHHTTC-------SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHH
T ss_pred --------------EEcCCHHHHHHHHHHHc-------CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHH
Confidence 56999999999987522 79999999999999988887764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 141 ~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 220 (361)
T 3ftb_A 141 KIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMP 220 (361)
T ss_dssp HTTTCSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCG
T ss_pred hccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCC
Confidence
Q ss_pred ---------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy16707 299 ---------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPW 361 (420)
Q Consensus 299 ---------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w 361 (420)
..+ .+. ..+++..++.++...|.+ .+ .++.++++++++|+.+.+.|++++. +
T Consensus 221 G~r~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~----~~---~~~~~~~~~~~~~~~l~~~l~~~~~---~ 289 (361)
T 3ftb_A 221 GIRFGYGITNNKEIAAKIKAKQN-PWNINCFAEMAAINCLKD----TN---YIEESLLWIKKERKRFIEELNKIGF---I 289 (361)
T ss_dssp GGCCEEEEESCHHHHHHHHTTSC-TTCSCHHHHHHHHHTSSC----HH---HHHHHHHHHHHHHHHHHHHHHHSSS---E
T ss_pred CcceeEEEeCCHHHHHHHHhhCC-CCCCCHHHHHHHHHHhcC----HH---HHHHHHHHHHHHHHHHHHHHHhCCC---C
Confidence 000 111 224566677666666654 23 4556668999999999999998731 4
Q ss_pred cccCCCCceEEecCC---CHH-HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 362 NHITDQIGMFCYTGL---NAT-QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 362 ~~i~~q~GmF~~~~l---~~~-~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv 419 (420)
.++.++.|.|.|+.+ +.+ .++.|+ ++||++.|+ + |||++ +.++++++.++++++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~ 358 (361)
T 3ftb_A 290 KRVFSPHANFVLCRLENISGEKLYDSLL-KEDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVE 358 (361)
T ss_dssp EEEECCSSSEEEEEESSSCHHHHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred ceecCCCCeEEEEEcCCCCHHHHHHHHH-HCCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHH
Confidence 424456677776543 444 456665 559999874 2 88886 5667889999998764
No 87
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.86 E-value=1e-12 Score=130.86 Aligned_cols=217 Identities=11% Similarity=0.045 Sum_probs=145.2
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.|||++|. + ..++++.|.+|......+ ..+.|.+. .+++++++++++....+..+++++|
T Consensus 31 ~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v---------- 92 (392)
T 3b1d_A 31 PQLLPAWIAD---M--DFEVMPEVKQAIHDYAEQ-LVYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDI---------- 92 (392)
Confidence 3789999996 3 345667777776665532 45778765 8999999999874332222334444
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------- 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------- 298 (420)
+.|.||+.|+.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 93 ------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~ 157 (392)
T 3b1d_A 93 ------------VFVEGVVPAISIAIQAF--TKE-GEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLE 157 (392)
Confidence 56999999999888755 347 899999999999998655544321
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 158 ~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~s 237 (392)
T 3b1d_A 158 NDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSAT 237 (392)
Confidence
Q ss_pred ----------------hh-hh------hhcc--CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ----------------KI-LI------RAFY--SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ 353 (420)
Q Consensus 299 ----------------~~-~~------r~~~--s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~ 353 (420)
.. ++ +..+ ++++..++.++...|.+. .+.++.++++++++|+.+.+.|+
T Consensus 238 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~ 311 (392)
T 3b1d_A 238 KTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG------KPWLVALKAVLEENIQFAVEYFA 311 (392)
Confidence 00 00 0111 223333333333333321 23456667889999999999988
Q ss_pred h-c-CCCCCCcccCCCCceEEecCCC-----H-HHHHHHHHhCCeEEeCC----------CcEEEcccCCCCHHHHHHHH
Q psy16707 354 K-E-GSNKPWNHITDQIGMFCYTGLN-----A-TQVEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAI 415 (420)
Q Consensus 354 ~-~-g~~~~w~~i~~q~GmF~~~~l~-----~-~~v~~Ll~e~~Vy~~p~----------gRis~agl~~~ni~~la~AI 415 (420)
+ + | |....++.|||.|+.++ . +.+++|++++||++.|+ -||+++. ++++|+...++|
T Consensus 312 ~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l 386 (392)
T 3b1d_A 312 QEAPR----LKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRI 386 (392)
Confidence 7 4 3 66677788888886443 2 34577767899999874 2999885 688899998888
Q ss_pred HHHhC
Q psy16707 416 HAVTK 420 (420)
Q Consensus 416 ~~vv~ 420 (420)
.++++
T Consensus 387 ~~~l~ 391 (392)
T 3b1d_A 387 VCCLP 391 (392)
Confidence 87653
No 88
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.22 E-value=3.3e-10 Score=111.37 Aligned_cols=216 Identities=13% Similarity=0.037 Sum_probs=148.1
Q ss_pred hHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcccc
Q psy16707 146 SSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLK 225 (420)
Q Consensus 146 ~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~ 225 (420)
.+..+...+..+ ..+.|||+.|. ++ ..+++.|.+|......+ .+.|.+ .|.+++++++++++ |. +
T Consensus 11 ~~~~~~~~~~~~-~~~~idl~~~~---~~--~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~-~~-----~ 75 (364)
T 1lc5_A 11 NIREPATVLGIS-PDQLLDFSANI---NP--LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH-QV-----P 75 (364)
T ss_dssp CCHHHHHHHTSC-GGGSEECSSCC---CT--TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH-TS-----C
T ss_pred cHHHHHHhcCCC-ccceEEecccc---CC--CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH-Cc-----C
Confidence 345555555433 34689999996 21 23567788777665532 467854 59999999999987 32 2
Q ss_pred CCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------
Q psy16707 226 DNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------- 298 (420)
Q Consensus 226 ~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------- 298 (420)
++.| +.|.|||.++.+++..+ + ||.|++++|+|+.|...++..|++
T Consensus 76 ~~~v----------------------~~~~g~~~al~~~~~~~----~-gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 128 (364)
T 1lc5_A 76 ASWI----------------------LAGNGETESIFTVASGL----K-PRRAMIVTPGFAEYGRALAQSGCEIRRWSLR 128 (364)
T ss_dssp GGGE----------------------EEESSHHHHHHHHHHHH----C-CSEEEEEESCCTHHHHHHHHTTCEEEEEECC
T ss_pred HHHE----------------------EECCCHHHHHHHHHHHc----C-CCeEEEeCCCcHHHHHHHHHcCCeEEEEeCC
Confidence 3444 56999999999988755 6 799999999999998877766542
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 129 ~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 208 (364)
T 1lc5_A 129 EADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHI 208 (364)
T ss_dssp GGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTE
T ss_pred cccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCE
Confidence
Q ss_pred ------------------------hh----h--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 ------------------------KI----L--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSL 348 (420)
Q Consensus 299 ------------------------~~----~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l 348 (420)
.. + .+..| +++..++.++...|.+ . +.++.++++++++|+.+
T Consensus 209 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~l~~----~---~~~~~~~~~~~~~~~~l 280 (364)
T 1lc5_A 209 WVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPW-SVNALAALAGEVALQD----S---AWQQATWHWLREEGARF 280 (364)
T ss_dssp EEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCTT-CSCHHHHHHHHHGGGC----H---HHHHHHHHHHHHHHHHH
T ss_pred EEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCCC-CCCHHHHHHHHHHHhC----c---HHHHHHHHHHHHHHHHH
Confidence 00 0 01122 3455666666655654 2 34556668999999999
Q ss_pred HHHHHhc-CCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHH
Q psy16707 349 KDNLQKE-GSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKA 414 (420)
Q Consensus 349 ~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~A 414 (420)
.+.|+++ | +... ++.|+|.|+.++ .+.++.|+ ++||++.|+ + |||++ +.+.++++.++
T Consensus 281 ~~~L~~~~~----~~~~-~~~g~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~ 352 (364)
T 1lc5_A 281 YQALCQLPL----LTVY-PGRANYLLLRCEREDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAA 352 (364)
T ss_dssp HHHHHTSTT----EEEC-CCSSSEEEEEESCTTCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHH
T ss_pred HHHHhcCCC----CEEC-CCCCeEEEEECCCcHHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHH
Confidence 9999876 4 5544 466788876443 24566775 679999874 2 88976 46678899999
Q ss_pred HHHHh
Q psy16707 415 IHAVT 419 (420)
Q Consensus 415 I~~vv 419 (420)
+.+++
T Consensus 353 l~~~~ 357 (364)
T 1lc5_A 353 LRNVL 357 (364)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98865
No 89
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.18 E-value=3.5e-10 Score=112.31 Aligned_cols=215 Identities=12% Similarity=0.025 Sum_probs=142.7
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~ 236 (420)
+.+.|||+.|.+ -+ .++++.|.++......+ .....|.+..|.+++++++++++-...+. +.+
T Consensus 42 g~~~idl~~~~~---~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v------- 106 (398)
T 3a2b_A 42 GRRVLMFGSNSY---LG-LTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAA------- 106 (398)
T ss_dssp TEEEEECSCSCT---TC-GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEE-------
T ss_pred CceEEEeecccc---cC-CCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcE-------
Confidence 346799999963 12 33566677666655433 12335677889999988888877322111 123
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------ 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------ 298 (420)
+.|.|||.|+.+++..+ +.| ||.|++++|+|+.|...++..|++
T Consensus 107 ---------------~~~~ggt~a~~~~~~~~--~~~-gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 168 (398)
T 3a2b_A 107 ---------------ILFSTGFQSNLGPLSCL--MGR-NDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSR 168 (398)
T ss_dssp ---------------EEESSHHHHHHHHHHHS--SCT-TCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHT
T ss_pred ---------------EEECCHHHHHHHHHHHH--hCC-CCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHh
Confidence 67999999999988754 457 999999999999999888777653
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 169 ~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~ 248 (398)
T 3a2b_A 169 LPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASL 248 (398)
T ss_dssp SCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS
T ss_pred hccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCC
Confidence
Q ss_pred -----------hhhh---h-hccCCCchHHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q psy16707 299 -----------KILI---R-AFYSSPPIHGARI-VQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN 362 (420)
Q Consensus 299 -----------~~~~---r-~~~s~pp~~ga~i-v~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~ 362 (420)
..+. + ...++++...+.+ +...| + .+ ++++.++++++++|+.+.+.|++.| |.
T Consensus 249 GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l-----~-~~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~ 317 (398)
T 3a2b_A 249 GGFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKAL-----E-II-QNEPEHIEKLWKNTDYAKAQLLDHG----FD 317 (398)
T ss_dssp CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHH-----H-HH-HHCTHHHHHHHHHHHHHHHHHHHTT----CC
T ss_pred CcEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHH-----H-HH-hhCHHHHHHHHHHHHHHHHHHHhcC----CC
Confidence 0000 0 1112222222221 11222 1 12 3456778999999999999999986 55
Q ss_pred ccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC-----------CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 363 HITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-----------GRISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 363 ~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~-----------gRis~ag-l~~~ni~~la~AI~~vv 419 (420)
.+. +.|+|.|+.++ . +.+++|+++ ||++.|+ -||+++. .+.++++++.++|.+++
T Consensus 318 ~~~-~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l 389 (398)
T 3a2b_A 318 LGA-TESPILPIFIRSNEKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVF 389 (398)
T ss_dssp BCS-CCSSEEEEECCCHHHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cCC-CCCCEEEEEcCCHHHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 444 44788886554 2 345677655 9999874 2999987 58889999999998875
No 90
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.12 E-value=4.5e-10 Score=112.22 Aligned_cols=124 Identities=42% Similarity=0.727 Sum_probs=113.3
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
..+++...|..+++||..+..++...|.+.++.++|.+.++.++++++..|+.|.+.|++.+.++.|..+..+.|||.+.
T Consensus 284 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 363 (412)
T 1yaa_A 284 TSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFT 363 (412)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEEC
T ss_pred HHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEee
Confidence 34566667888999999999999999999999999999999999999999999999999987666688888899999999
Q ss_pred CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
+++.+++..+.++++|++.+..||+++.++..+++.++++|.++
T Consensus 364 ~~~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~ 407 (412)
T 1yaa_A 364 GLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEV 407 (412)
T ss_dssp CCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEeccCcEEEEccCCHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876
No 91
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.11 E-value=4.7e-10 Score=111.03 Aligned_cols=123 Identities=32% Similarity=0.636 Sum_probs=111.3
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++...|..|++||..+..++...|.+.+|+..|.+.++.++++++..|+.|.+.|++.+.++.|..+..+.|||.+.++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~ 350 (394)
T 2ay1_A 271 AMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGA 350 (394)
T ss_dssp HHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCC
T ss_pred HHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCC
Confidence 34445678899989999999999999999999999999999999999999999999988766568877778899999999
Q ss_pred CHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhhC
Q psy16707 86 NATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 86 ~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v~ 128 (420)
+++++..+.++++|++.+..||+++.++..++++++++|.++|
T Consensus 351 ~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~~ 393 (394)
T 2ay1_A 351 TPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVG 393 (394)
T ss_dssp CHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCEEecCCCeEEeecCCHhhHHHHHHHHHHcc
Confidence 9999998888999999999999999899999999999999885
No 92
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.03 E-value=2.6e-09 Score=104.58 Aligned_cols=205 Identities=12% Similarity=0.088 Sum_probs=138.0
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCcccccc
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGA 245 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~ 245 (420)
.|.|..+-.++++.|.+|.... ..+.|.+. ..++++++++++ +|.+ +++.|
T Consensus 21 ~~l~~~~~~~~~~~v~~a~~~~----~~~~~~~~--~~~~~~~~~~~la~~~g~~----~~~~v---------------- 74 (386)
T 2dr1_A 21 YKLFTAGPVACFPEVLEIMKVQ----MFSHRSKE--YRKVHMDTVERLREFLEVE----KGEVL---------------- 74 (386)
T ss_dssp SEECCSSSCCCCHHHHHHTTSC----CCCTTSHH--HHHHHHHHHHHHHHHHTCS----SSEEE----------------
T ss_pred ceeecCCCcCCcHHHHHHHhcc----cccccCHH--HHHHHHHHHHHHHHHhCCC----CCcEE----------------
Confidence 5666666677788888775432 23467543 256677766665 4532 12323
Q ss_pred ccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC--cHHHHhhcCcc-------------------------
Q psy16707 246 AFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN--HIPICKHTGLE------------------------- 298 (420)
Q Consensus 246 ~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n--y~~i~~~aG~~------------------------- 298 (420)
+.|.|||.|+.+++..+ +.| ||+|++++|+|+. |...++..|++
T Consensus 75 ------~~~~g~t~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~ 145 (386)
T 2dr1_A 75 ------LVPSSGTGIMEASIRNG--VSK-GGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNP 145 (386)
T ss_dssp ------EESSCHHHHHHHHHHHH--SCT-TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCT
T ss_pred ------EEeCChHHHHHHHHHHh--hcC-CCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCC
Confidence 67999999999988755 457 8999999999998 88777777764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 146 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~ 225 (386)
T 2dr1_A 146 DVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERF 225 (386)
T ss_dssp TCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHH
T ss_pred CCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHH
Confidence
Q ss_pred -hhh---------------------hhhccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHh
Q psy16707 299 -KIL---------------------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQK 354 (420)
Q Consensus 299 -~~~---------------------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~ 354 (420)
..+ .+....+++..++..+...| +.+.++ ++.++++++++++.+.+.|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l------~~~~~~g~~~~~~~~~~~~~~~l~~~L~~ 299 (386)
T 2dr1_A 226 LEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVAL------RIIEKMGGKEKWLEMYEKRAKMVREGVRE 299 (386)
T ss_dssp HHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHH------HHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHH------HHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 111 01223345555555444433 233343 677889999999999999998
Q ss_pred cCCCCCCcccCCC---CceEEec----CCCHH-HHHHHHHhCCeEEeCC------C--cEEEcc-cCCCCHHHHHHHHHH
Q psy16707 355 EGSNKPWNHITDQ---IGMFCYT----GLNAT-QVEKLIKEHSVYLTKD------G--RISMAG-VTSKNVGYLAKAIHA 417 (420)
Q Consensus 355 ~g~~~~w~~i~~q---~GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~------g--Ris~ag-l~~~ni~~la~AI~~ 417 (420)
.| +....++ .|.|.++ +.+.+ .+++|+++ ||++.|+ + ||+++. .+.++++++.++|.+
T Consensus 300 ~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 374 (386)
T 2dr1_A 300 IG----LDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLRE 374 (386)
T ss_dssp TT----CCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred cC----CeeCcCccccCCceEEEEcCCCCCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 86 4444443 3666654 33444 45677555 9999874 2 999986 688999999999988
Q ss_pred Hh
Q psy16707 418 VT 419 (420)
Q Consensus 418 vv 419 (420)
++
T Consensus 375 ~~ 376 (386)
T 2dr1_A 375 VI 376 (386)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 93
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.01 E-value=2.7e-09 Score=106.41 Aligned_cols=123 Identities=49% Similarity=0.840 Sum_probs=111.3
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
.++....|..|++||..+..++...|.+.++..+|.+.++.++++++..|..|.+.|++.+.++.|..+..+.|+|.+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 364 (412)
T 1ajs_A 285 SQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTG 364 (412)
T ss_dssp HHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECC
T ss_pred HHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeC
Confidence 34555677889988999999999999999999999999999999999999999999999876667888888999999999
Q ss_pred CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
++.+.+..+.++++|++.+.+||+++.++..+++.+.++|.++
T Consensus 365 ~~~~~~~~~l~~~gv~v~~~~Ris~~~~~~~~i~~~~~~l~~~ 407 (412)
T 1ajs_A 365 LNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEA 407 (412)
T ss_dssp CCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEecCCcEEEeeeCCHHHHHHHHHHHHHH
Confidence 9998999888899999999999999988999999999998875
No 94
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.99 E-value=2.5e-09 Score=105.67 Aligned_cols=122 Identities=42% Similarity=0.667 Sum_probs=108.8
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.+....|..|++||..+..++...|++.+|+..|.+.++.++++++..|+.|.+.|++.+.++.|..+..+.|||.+.++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 353 (396)
T 2q7w_A 274 QMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGL 353 (396)
T ss_dssp HHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCC
T ss_pred HHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecC
Confidence 34445678899989999999999999999999999999999999999999999999998766568777789999999999
Q ss_pred CHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707 86 NATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v 127 (420)
+.+.+..+.++++|++.+..||+++.++..+++.++++|.++
T Consensus 354 ~~~~~~~~l~~~gv~v~~~~Ris~~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp CHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCeeecCCceEEEeecCHHHHHHHHHHHHhc
Confidence 999999888899999999999999988999999999999865
No 95
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=98.99 E-value=2.9e-09 Score=105.49 Aligned_cols=104 Identities=12% Similarity=-0.022 Sum_probs=72.4
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccC------CCCCCCC--CCCCHHHHHHHHHHHcCCCCccccCCceeee
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN------LDKEYAP--IIGAPDFGKLAAQLAYGEDCPQLKDNLISIV 232 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~------~~~~Y~p--~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~ 232 (420)
+.|+|..|.+ + +.++.|.+|......+. ..+.|.+ ..|.+++++++++++ |.. +++.|
T Consensus 28 ~~i~l~~~~~----~--~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-~~~----~~~~v--- 93 (420)
T 1t3i_A 28 PLVYLDNAAT----S--QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI-NAR----SPREI--- 93 (420)
T ss_dssp ECEECBTTTC----C--CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT-TCS----CGGGE---
T ss_pred ceEEecCCcc----C--CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc-CCC----CCCeE---
Confidence 4799999973 2 45567777766655431 1245654 578899999999976 431 13344
Q ss_pred cccCCCCccccccccccceeecccchHHHHHHHHHHH--hcCCCCCEEEEcCCCCCC----cHHHHhhcCcc
Q psy16707 233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK--NFFPGEKVIYVPTPTWGN----HIPICKHTGLE 298 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~--~~~p~gd~VlvpdP~w~n----y~~i~~~aG~~ 298 (420)
+.|.|||.|+.+++..+. .+.| ||.|++++|+|+. |..+++..|++
T Consensus 94 -------------------~~~~g~t~a~~~~~~~~~~~~~~~-gd~Vl~~~~~~~~~~~~~~~~~~~~g~~ 145 (420)
T 1t3i_A 94 -------------------VYTRNATEAINLVAYSWGMNNLKA-GDEIITTVMEHHSNLVPWQMVAAKTGAV 145 (420)
T ss_dssp -------------------EEESSHHHHHHHHHHHTHHHHCCT-TCEEEEETTCCGGGTHHHHHHHHHHCCE
T ss_pred -------------------EEcCChHHHHHHHHHHhhhcccCC-CCEEEECcchhHHHHHHHHHHHHhcCcE
Confidence 669999999999887551 1457 8999999999999 55666666654
No 96
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=98.98 E-value=5.2e-09 Score=102.23 Aligned_cols=212 Identities=16% Similarity=0.182 Sum_probs=139.9
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccC-CC----C--CCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKN-LD----K--EYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL 241 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~-~~----~--~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 241 (420)
.|.|..+..++++.|.+|......+. .+ + .|.+..|.++|++++++++ |. +++.|
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~-----~~~~v------------ 64 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL-GV-----SPSEI------------ 64 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH-TS-----CGGGE------------
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc-CC-----CCCeE------------
Confidence 35565556688888888887765431 01 1 2344567799999999977 42 23444
Q ss_pred ccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHH---hhcCcc------------------
Q psy16707 242 RVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPIC---KHTGLE------------------ 298 (420)
Q Consensus 242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~---~~aG~~------------------ 298 (420)
+.|.|||.|+.+++..+.. ..| ||+|++++|+|+.+...+ +..|++
T Consensus 65 ----------~~~~g~t~a~~~~~~~~~~~~~~~-gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 133 (384)
T 1eg5_A 65 ----------FFTSCATESINWILKTVAETFEKR-KRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELE 133 (384)
T ss_dssp ----------EEESCHHHHHHHHHHHHHHHTTTT-CCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHH
T ss_pred ----------EEECCHHHHHHHHHHhhhhhccCC-CCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHH
Confidence 5699999999998876641 147 899999999999886655 555653
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 134 ~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~ 213 (384)
T 1eg5_A 134 KLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGIT 213 (384)
T ss_dssp HHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEE
T ss_pred HHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEE
Confidence
Q ss_pred ---hhh-hh-----------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707 299 ---KIL-IR-----------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH 363 (420)
Q Consensus 299 ---~~~-~r-----------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~ 363 (420)
..+ ++ ....+++..++..+...|. .+.+.++.++++++++|+.+.+.|++.| +..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~ 283 (384)
T 1eg5_A 214 YIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAME------IAVEELSEAAKHMEKLRSKLVSGLMNLG----AHI 283 (384)
T ss_dssp EECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHH------HHHHTHHHHHHHHHHHHHHHHHHHHTTT----CEE
T ss_pred EEcCCCccccccccCcccccccCCCCChHHHHHHHHHHH------HHHHhHHHHHHHHHHHHHHHHHHhCCCC----eEE
Confidence 111 11 1223455556655544342 2345677788999999999999999855 444
Q ss_pred cCCCC----ceEE--ecCCCHHHHHHHHHhCCeEEeCC-------------------------C--cEEEcc-cCCCCHH
Q psy16707 364 ITDQI----GMFC--YTGLNATQVEKLIKEHSVYLTKD-------------------------G--RISMAG-VTSKNVG 409 (420)
Q Consensus 364 i~~q~----GmF~--~~~l~~~~v~~Ll~e~~Vy~~p~-------------------------g--Ris~ag-l~~~ni~ 409 (420)
+.++. +++. +.+.+.+.+...+.++||++.++ + ||+++. .+.++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~ 363 (384)
T 1eg5_A 284 ITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVD 363 (384)
T ss_dssp CSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHH
T ss_pred eCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHH
Confidence 44321 1222 23455555533447899999873 2 999874 5788999
Q ss_pred HHHHHHHHHh
Q psy16707 410 YLAKAIHAVT 419 (420)
Q Consensus 410 ~la~AI~~vv 419 (420)
++.++|.+++
T Consensus 364 ~~~~~l~~~~ 373 (384)
T 1eg5_A 364 YFLKKIEEIL 373 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998875
No 97
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=98.97 E-value=6.2e-09 Score=102.58 Aligned_cols=82 Identities=16% Similarity=0.243 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeC-------CC---
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTK-------DG--- 396 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p-------~g--- 396 (420)
+.++.++++++++|+.+.+.|++.| |... ++.|.|.|+.++ .+.+++|+ ++||++.| .+
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~ 368 (399)
T 3tqx_A 295 TEGPQLRKQLQENSRYFRAGMEKLG----FQLV-PGNHPIIPVMLGDAQLATNMADHLL-QEGIYVVGFSYPVVPMGKAR 368 (399)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHT----CCBC-CCSSSEEEEEEECHHHHHHHHHHHH-HTTEECCEECTTTSCTTCEE
T ss_pred hccHHHHHHHHHHHHHHHHHHHHcC----CCcC-CCCCCEEEEEeCCHHHHHHHHHHHH-HCCCEEeeeCCCCCCCCCce
Confidence 4467888999999999999999997 5555 445556654332 24556675 57999984 22
Q ss_pred -cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 397 -RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 -Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
||+++ ..+.++++++.++|.+++
T Consensus 369 iRi~~~~~~~~~~i~~~~~~l~~~~ 393 (399)
T 3tqx_A 369 IRVQMSAVHTQQQLDRAIEAFGQVG 393 (399)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCHHHHHHHHHHHHHHH
Confidence 99997 568899999999998875
No 98
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=98.95 E-value=3.3e-09 Score=104.47 Aligned_cols=87 Identities=10% Similarity=0.071 Sum_probs=62.9
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CC---CceEEec----CCCH-HHHHHHHHhCCeEEeCCC--
Q psy16707 329 QWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQ---IGMFCYT----GLNA-TQVEKLIKEHSVYLTKDG-- 396 (420)
Q Consensus 329 ~w~~e-l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q---~GmF~~~----~l~~-~~v~~Ll~e~~Vy~~p~g-- 396 (420)
.|.++ ++.++++++++|+.+.+.|+++| +.... .+ .+.|.++ +.+. +.+++|.+++||++.++.
T Consensus 262 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~ 337 (392)
T 2z9v_A 262 LYLNEGPEAVWARHALTAKAMRAGVTAMG----LSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGE 337 (392)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGG
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHcC----CeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCC
Confidence 34445 77888999999999999999875 44444 21 3444443 3444 455778766799998752
Q ss_pred ------cEEE-c-ccCCCCHHHHHHHHHHHh
Q psy16707 397 ------RISM-A-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 ------Ris~-a-gl~~~ni~~la~AI~~vv 419 (420)
||++ + ..+.++++++.++|.+++
T Consensus 338 ~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~ 368 (392)
T 2z9v_A 338 TLGKLTRIGHMGPTAQPIYAIAALTALGGAM 368 (392)
T ss_dssp GTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCcccccCHHHHHHHHHHHHHHH
Confidence 9995 5 589999999999998875
No 99
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=98.94 E-value=1.4e-08 Score=100.25 Aligned_cols=103 Identities=17% Similarity=0.247 Sum_probs=67.5
Q ss_pred CCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC---ceEEec----CCCHH
Q psy16707 308 SPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI---GMFCYT----GLNAT 379 (420)
Q Consensus 308 ~pp~~ga~iv~~IL~dp~L~~~w~~-el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~---GmF~~~----~l~~~ 379 (420)
+++..++..+...|. .+.+ .++.++++++++|+.+.+.|++.| +..+.++. +.|.++ +.+.+
T Consensus 272 ~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
T 1vjo_A 272 TAPINLYYALREALR------LIAQEGLANCWQRHQKNVEYLWERLEDIG----LSLHVEKEYRLPTLTTVCIPDGVDGK 341 (393)
T ss_dssp CCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCTTCCHH
T ss_pred CCCHHHHHHHHHHHH------HHHHccHHHHHHHHHHHHHHHHHHHHHcC----CcccCCccccCCcEEEEEcCCCCCHH
Confidence 555555554444332 2222 367788999999999999999886 55444432 233332 34444
Q ss_pred -HHHHHHHhCCeEEeCC------C--cEEEccc--CCCCHHHHHHHHHHHhC
Q psy16707 380 -QVEKLIKEHSVYLTKD------G--RISMAGV--TSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 380 -~v~~Ll~e~~Vy~~p~------g--Ris~agl--~~~ni~~la~AI~~vv~ 420 (420)
.++.|++++||++.|+ + ||++.+. ++++++++.++|.++++
T Consensus 342 ~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 342 AVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp HHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 5577877779999874 2 9996443 34469999999998864
No 100
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=98.91 E-value=1.7e-08 Score=97.58 Aligned_cols=208 Identities=13% Similarity=0.085 Sum_probs=137.4
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecc
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQG 234 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~ 234 (420)
.++..|+|..+. ..++++.|.+|...... .|.+..|..++++++++++ +|. ++++|
T Consensus 11 ~~p~~i~l~~~~------~~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g~-----~~~~v----- 69 (359)
T 1svv_A 11 AKPKPYSFVNDY------SVGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLER-----PDADV----- 69 (359)
T ss_dssp ----CEECSCSC------SSCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHTC-----TTSEE-----
T ss_pred CCCeeEEecCCC------cCCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhCC-----CCccE-----
Confidence 345678887753 23677788888776542 4777889999999998887 452 23444
Q ss_pred cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH--HHhhcCcc--------------
Q psy16707 235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP--ICKHTGLE-------------- 298 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~--i~~~aG~~-------------- 298 (420)
+.|.|||.|+.+++..+ ..| ||.|++++|+|+.|.. .++..|++
T Consensus 70 -----------------~~~~g~t~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~ 129 (359)
T 1svv_A 70 -----------------HFISGGTQTNLIACSLA--LRP-WEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVA 129 (359)
T ss_dssp -----------------EEESCHHHHHHHHHHHH--CCT-TEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHH
T ss_pred -----------------EEeCCchHHHHHHHHHH--hCC-CCEEEEcccchHHHHHHHHHhcCCCeeEEEeCCCCeecHH
Confidence 56999999999998765 447 8999999999998865 24433331
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 130 ~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~ 209 (359)
T 1svv_A 130 DIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDM 209 (359)
T ss_dssp HHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSE
T ss_pred HHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCE
Confidence
Q ss_pred --------------------hhh---hh-----hc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16707 299 --------------------KIL---IR-----AF--YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSL 348 (420)
Q Consensus 299 --------------------~~~---~r-----~~--~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l 348 (420)
..+ .+ .. ++.++..++.+ ..+|.+ ..++.++++++++|+.+
T Consensus 210 ~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~--------~~~~~~~~~~~~~~~~l 280 (359)
T 1svv_A 210 FYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQF-EVLMKD--------NLFFELGAHSNKMAAIL 280 (359)
T ss_dssp EEEECTTTTCSSCEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHH-HHHTST--------THHHHHHHHHHHHHHHH
T ss_pred EEEecccCCCCCceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHH-HHHHhh--------hhHHHHHHHHHHHHHHH
Confidence 000 00 00 01111112221 122322 12355678899999999
Q ss_pred HHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeC---CC----cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 349 KDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK---DG----RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 349 ~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p---~g----Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
.+.|+..| |..+.+..++|.|..++.+.+++|++++||++.+ .+ ||++.. .+.++++++.++|.+++
T Consensus 281 ~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 355 (359)
T 1svv_A 281 KAGLEACG----IRLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLV 355 (359)
T ss_dssp HHHHHHTT----CCBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC-
T ss_pred HHHhccCC----eEEccCCccceEEEEcCHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHH
Confidence 99995444 6666677889998888778888898777999853 22 898653 57889999999998875
No 101
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=98.90 E-value=1.2e-08 Score=100.51 Aligned_cols=84 Identities=14% Similarity=0.170 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC----ceEEec----CCCHH-HHHHHHHhCCeEEeCC------C
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCYT----GLNAT-QVEKLIKEHSVYLTKD------G 396 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~----GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~------g 396 (420)
+.++.++++++++|+.+.+.|+++| +..+.++. |.|.++ +.+.+ .+++|++++||++.++ +
T Consensus 278 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~ 353 (396)
T 2ch1_A 278 EGLENQIKRRIECAQILYEGLGKMG----LDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGK 353 (396)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHT----CCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHCC----CeeccCCccccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCC
Confidence 4477788999999999999999886 55555443 234443 34554 4577877789999874 2
Q ss_pred --cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707 397 --RISMAG--VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 --Ris~ag--l~~~ni~~la~AI~~vv 419 (420)
||++.+ .++++++++.++|.+++
T Consensus 354 ~iRi~~~~~~~~~e~i~~~~~~l~~~l 380 (396)
T 2ch1_A 354 AWRVGIMGECSTVQKIQFYLYGFKESL 380 (396)
T ss_dssp EEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCcCCHHHHHHHHHHHHHHH
Confidence 999854 46778999999998875
No 102
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=98.87 E-value=4.8e-08 Score=95.42 Aligned_cols=211 Identities=15% Similarity=0.052 Sum_probs=136.7
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccC-CC--CCCCC----CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKN-LD--KEYAP----IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL 241 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~-~~--~~Y~p----~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 241 (420)
.|.|..+..++++.|.+|......+. .+ ..|.+ ..+..++++++++++ |.+ ++.|
T Consensus 2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~-----~~~v------------ 63 (382)
T 4eb5_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV-NGG-----GGTV------------ 63 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH-TCT-----TEEE------------
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeE------------
Confidence 37777777788999999888766431 11 12432 246788899999875 432 2334
Q ss_pred ccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHHhh---cCcc------------------
Q psy16707 242 RVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPICKH---TGLE------------------ 298 (420)
Q Consensus 242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~~~---aG~~------------------ 298 (420)
+.|.|||.|+.+++..+.. ..| ||+|++++|+|+.+...++. .|++
T Consensus 64 ----------~~~~g~t~a~~~~~~~l~~~~~~~-gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 132 (382)
T 4eb5_A 64 ----------VFTSGATEANNLAIIGYAMRNARK-GKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFID 132 (382)
T ss_dssp ----------EEESSHHHHHHHHHHHHHHHHGGG-CCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHH
T ss_pred ----------EEcCchHHHHHHHHHHHHhhccCC-CCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHH
Confidence 6799999999998876641 147 89999999999988766653 4553
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 133 ~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~ 212 (382)
T 4eb5_A 133 QKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAALHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIR 212 (382)
T ss_dssp HHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEEEEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEE
T ss_pred HHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCEEEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEc
Confidence
Q ss_pred hhh-hh-----------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC
Q psy16707 299 KIL-IR-----------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT 365 (420)
Q Consensus 299 ~~~-~r-----------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~ 365 (420)
... ++ ...++++..++..+...| +.+.+.++.++++++++|+.+.+.|+++ | +....
T Consensus 213 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~ 282 (382)
T 4eb5_A 213 KEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAA------EITAMEWREEAERLRRLRDRIIDNVLKIEE----SYLNG 282 (382)
T ss_dssp TTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTSTT----EEECS
T ss_pred cccccCceecCCCccccccCCCccHHHHHHHHHHH------HHHHHhHHHHHHHHHHHHHHHHHHHhhCCC----eEEeC
Confidence 110 11 112233333333222222 2334457788899999999999999875 3 44333
Q ss_pred CC----CceEEe--cCCCHHHH-HHHHHhCCeEEeCC-------------------------C--cEEEcc-cCCCCHHH
Q psy16707 366 DQ----IGMFCY--TGLNATQV-EKLIKEHSVYLTKD-------------------------G--RISMAG-VTSKNVGY 410 (420)
Q Consensus 366 ~q----~GmF~~--~~l~~~~v-~~Ll~e~~Vy~~p~-------------------------g--Ris~ag-l~~~ni~~ 410 (420)
++ .+++.+ .+.+.+.+ +.| .++||++.++ + ||+++. .+.+++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~ 361 (382)
T 4eb5_A 283 HPEKRLPNNVNVRFSYIEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDR 361 (382)
T ss_dssp CSSSBCTTEEEEEETTSCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHH
T ss_pred CcccCCCCEEEEEeCCcCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHH
Confidence 32 345443 24455544 555 5789999763 2 999874 47889999
Q ss_pred HHHHHHHHh
Q psy16707 411 LAKAIHAVT 419 (420)
Q Consensus 411 la~AI~~vv 419 (420)
+.++|.+++
T Consensus 362 ~~~~l~~~~ 370 (382)
T 4eb5_A 362 LLEVLPGVI 370 (382)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 103
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=98.85 E-value=1.7e-08 Score=99.35 Aligned_cols=82 Identities=17% Similarity=0.255 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---CceEEec----CCCHH-HHHHHHHhCCeEEeCC------C--c
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMFCYT----GLNAT-QVEKLIKEHSVYLTKD------G--R 397 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~------g--R 397 (420)
++.++++++++|+.+.+.|+++| +..+.++ .++|.++ +.+.+ .+++|++++||++.++ + |
T Consensus 281 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~R 356 (393)
T 2huf_A 281 LPALIARHEDCAKRLYRGLQDAG----FELYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFR 356 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeccCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEE
Confidence 67788999999999999999886 4444442 3434432 34554 4577877889999874 2 9
Q ss_pred EEEccc--CCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGV--TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl--~~~ni~~la~AI~~vv 419 (420)
|++.+. +.++++++.++|.+++
T Consensus 357 i~~~~~~~~~e~i~~~~~~l~~~~ 380 (393)
T 2huf_A 357 IGLMGQNATTERVDRVLQVFQEAV 380 (393)
T ss_dssp EECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEcccCcCCHHHHHHHHHHHHHHH
Confidence 999553 4667999999998875
No 104
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.82 E-value=2.2e-08 Score=96.82 Aligned_cols=82 Identities=12% Similarity=0.091 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC-CceEEec----CCCHHHH-HHHHHhCCeEEeCC------C--cE
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ-IGMFCYT----GLNATQV-EKLIKEHSVYLTKD------G--RI 398 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q-~GmF~~~----~l~~~~v-~~Ll~e~~Vy~~p~------g--Ri 398 (420)
+++.++++++++|+.+.+.|++.| +....++ .|.|.++ +.+.+++ ++| .++||++.++ + ||
T Consensus 249 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRi 323 (352)
T 1iug_A 249 RLEEHLALKAWQNALLYGVGEEGG----LRPVPKRFSPAVAAFYLPEGVPYARVKEAF-AQRGAVIAGGQGPLKGKVFRL 323 (352)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHTT----CEESCSSBCTTCEEEECCTTCCHHHHHHHH-HTTTEECEECCGGGTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC----CcccccccCCeEEEEEcCCCCCHHHHHHHH-HHCCEEEEeCCCccCCCEEEE
Confidence 367788999999999999999876 5545443 5666654 3455544 566 5679999864 2 99
Q ss_pred EEccc-CCCCHHHHHHHHHHHh
Q psy16707 399 SMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~agl-~~~ni~~la~AI~~vv 419 (420)
+++.. +.++++++.++|.+++
T Consensus 324 ~~~~~~~~~~i~~~~~~l~~~~ 345 (352)
T 1iug_A 324 SLMGAYDRYEALGVAGMFREVL 345 (352)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHH
T ss_pred EccccCCHHHHHHHHHHHHHHH
Confidence 99865 4788999999998875
No 105
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=98.81 E-value=1.3e-07 Score=94.45 Aligned_cols=78 Identities=12% Similarity=0.130 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeC-------CC----cE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTK-------DG----RI 398 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p-------~g----Ri 398 (420)
+.++++++++|+.+.+.|+++| |... ..|+|.|+.++ . +.++.|+ +.||++.| .+ ||
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~g----~~~~--~~~~~~~~~~~~~~~~~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi 379 (409)
T 3kki_A 307 DNRRQHLDRMARKLRIGLSQLG----LTIR--SESQIIGLETGDERNTEKVRDYLE-SNGVFGSVFCRPATSKNKNIIRL 379 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT----CCCC--CSSSEEEEEEESHHHHHHHHHHHH-HTTEECEEECTTSSCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CccC--CCCCEEEEEeCCHHHHHHHHHHHH-HCCceEeeeCCCCcCCCCcEEEE
Confidence 5677899999999999999987 5433 46777765332 2 3456775 45999943 22 89
Q ss_pred EEcc-cCCCCHHHHHHHHHHHh
Q psy16707 399 SMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~ag-l~~~ni~~la~AI~~vv 419 (420)
+++. .+++.|+++.++|.+++
T Consensus 380 ~~~~~~t~e~i~~~~~~l~~~l 401 (409)
T 3kki_A 380 SLNSDVNDEQIAKIIEVCSDAV 401 (409)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHH
T ss_pred EccCCCCHHHHHHHHHHHHHHH
Confidence 9874 47789999999998875
No 106
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=98.79 E-value=2.3e-08 Score=98.07 Aligned_cols=80 Identities=19% Similarity=0.218 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCCCccc---CCCCceEEec---CCCHH-HHHHHHHhCCeEEeCCC-----cEEE
Q psy16707 334 VKGMADRIISMRQSLKDNLQKE-GSNKPWNHI---TDQIGMFCYT---GLNAT-QVEKLIKEHSVYLTKDG-----RISM 400 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i---~~q~GmF~~~---~l~~~-~v~~Ll~e~~Vy~~p~g-----Ris~ 400 (420)
++.++++++++|+.+.+.|+++ | |..+ ..+.++|.|. +.+.+ .+++| .++||++.++. ||++
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~iRis~ 369 (390)
T 1elu_A 295 AEERYQAICQRSEFLWRGLNQLPH----VHCLATSAPQAGLVSFTVDSPLGHRAIVQKL-EEQRIYLRTIADPDCIRACC 369 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTT----EEESCSSCCSSSEEEEEECSSSCHHHHHHHH-HHTTEECEEETTTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC----cEEecCccccccEEEEEcCCCCCHHHHHHHH-HHCCEEEEecCCCCeEEEec
Confidence 7778899999999999999986 4 5544 2356666652 33454 45666 68899998753 9998
Q ss_pred -cccCCCCHHHHHHHHHHH
Q psy16707 401 -AGVTSKNVGYLAKAIHAV 418 (420)
Q Consensus 401 -agl~~~ni~~la~AI~~v 418 (420)
...+.++++++.++|.++
T Consensus 370 ~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 370 HYITDEEEINHLLARLADF 388 (390)
T ss_dssp CTTCCHHHHHHHHHHHTTC
T ss_pred ccCCCHHHHHHHHHHHHhh
Confidence 347888999999998764
No 107
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=98.77 E-value=1.9e-07 Score=90.62 Aligned_cols=86 Identities=14% Similarity=0.152 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC----ceEEe--cCCCHHHHHHHHHhCCeEEeCC---------
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCY--TGLNATQVEKLIKEHSVYLTKD--------- 395 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~----GmF~~--~~l~~~~v~~Ll~e~~Vy~~p~--------- 395 (420)
.+.++.++++++++|+.+.+.|+++. + +....++. +++.+ .+.+.+.+...++++||++.++
T Consensus 251 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~ 327 (382)
T 4hvk_A 251 AMEWREEAERLRRLRDRIIDNVLKIE--E-SYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQ 327 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTST--T-EEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------C
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCC--C-eEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCc
Confidence 35667778999999999999998752 1 44333332 23333 3556666645557889999864
Q ss_pred ----------------C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 396 ----------------G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ----------------g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
+ ||++... +.+.++++.++|++++
T Consensus 328 ~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~ 370 (382)
T 4hvk_A 328 PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVI 370 (382)
T ss_dssp CCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred chHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 2 8998743 5678999999998875
No 108
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=98.76 E-value=8.9e-08 Score=94.12 Aligned_cols=83 Identities=13% Similarity=0.223 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCC--CCceEEec--CCCHHHHHHHHHhCCeEEeCC------------
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITD--QIGMFCYT--GLNATQVEKLIKEHSVYLTKD------------ 395 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~--q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p~------------ 395 (420)
.++.++++++++++.+.+.|+++ | +..+.+ +.++|.|. +.+.+.+...+.++||++.|+
T Consensus 298 ~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g 373 (406)
T 1kmj_A 298 GLNNIAEYEQNLMHYALSQLESVPD----LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSTT----EEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCC----eEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcC
Confidence 35567789999999999999886 4 555555 67777763 335555545557889999752
Q ss_pred --C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 396 --G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
+ ||+++.. ++++++++.++|.+++
T Consensus 374 ~~~~iRis~~~~~t~~~i~~~~~~l~~~~ 402 (406)
T 1kmj_A 374 VPAMCRASLAMYNTHEEVDRLVTGLQRIH 402 (406)
T ss_dssp CSCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeecCCCHHHHHHHHHHHHHHH
Confidence 2 9999865 7788999999998875
No 109
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=98.75 E-value=6.8e-08 Score=95.10 Aligned_cols=210 Identities=14% Similarity=0.147 Sum_probs=134.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CC---CCCC--CCCCCCHHHHHHHHHHHcCCCCccccCCceeee
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NL---DKEY--APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIV 232 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~---~~~Y--~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~ 232 (420)
+...||++.|.| -| .++++.|.+|......+ .. ...| .+..+..++++++++++ |.+ + .
T Consensus 38 g~~~id~~~~~~---~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~------~-~--- 102 (384)
T 1bs0_A 38 DRQYLNFSSNDY---LG-LSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL-GYS------R-A--- 102 (384)
T ss_dssp TEEEEECSCCCT---TS-GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH-TCS------E-E---
T ss_pred CceEEEeeccCc---cC-CCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh-CCC------c-E---
Confidence 346799999963 12 24566677776665433 11 1223 45678899999999987 431 1 1
Q ss_pred cccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------
Q psy16707 233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------- 298 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------- 298 (420)
+.+.+||.++..++..+ ..| ||.|++++|+|+.+...++..|++
T Consensus 103 -------------------i~~~sGt~a~~~~~~~~--~~~-gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~ 160 (384)
T 1bs0_A 103 -------------------LLFISGFAANQAVIAAM--MAK-EDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLAR 160 (384)
T ss_dssp -------------------EEESCHHHHHHHHHHHH--CCT-TCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHH
T ss_pred -------------------EEeCCcHHHHHHHHHHh--CCC-CcEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHH
Confidence 45666799998877654 457 899999999999999888877764
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 161 ~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~ 240 (384)
T 1bs0_A 161 LLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGV 240 (384)
T ss_dssp HHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSS
T ss_pred HHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhc
Confidence
Q ss_pred ------------hhhhh--hcc--C-CCchHHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707 299 ------------KILIR--AFY--S-SPPIHGARIVQEILGDPKLKAQWLT--EVKGMADRIISMRQSLKDNLQKEGSNK 359 (420)
Q Consensus 299 ------------~~~~r--~~~--s-~pp~~ga~iv~~IL~dp~L~~~w~~--el~~m~~r~~~~R~~l~~~L~~~g~~~ 359 (420)
..+.+ ..| + +++...+.++...| ++.+ .++.++++++++|+.+.+.|++.|
T Consensus 241 ~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al-------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--- 310 (384)
T 1bs0_A 241 SGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASL-------AVIRSDEGDARREKLAALITRFRAGVQDLP--- 310 (384)
T ss_dssp CCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHH-------HHHHSHHHHHHHHHHHHHHHHHHHHHTTSS---
T ss_pred cCcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHH-------HHHhccccHHHHHHHHHHHHHHHHHHHhcC---
Confidence 00000 011 1 23333333222222 1122 445677899999999999999886
Q ss_pred CCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC---------C--cEEEccc-CCCCHHHHHHHHHHH
Q psy16707 360 PWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD---------G--RISMAGV-TSKNVGYLAKAIHAV 418 (420)
Q Consensus 360 ~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~---------g--Ris~agl-~~~ni~~la~AI~~v 418 (420)
|+..+ ..|.|+|+.++ . +.+++|+ +.||++.|+ + ||+++.. +.++++++.++|.++
T Consensus 311 -~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 311 -FTLAD-SCSAIQPLIVGDNSRALQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp -CEECS-CCSSBCCEEEESHHHHHHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred -CcccC-CCCCEEEEEeCCHHHHHHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 55443 55666654332 3 3446665 569999763 2 9998743 788999999998875
No 110
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=98.74 E-value=1.8e-07 Score=94.37 Aligned_cols=212 Identities=16% Similarity=0.129 Sum_probs=134.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHcc-C-CCCCCCCCCCC----HHHHHHHHHHHcCCCCccccCCceeee
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-N-LDKEYAPIIGA----PDFGKLAAQLAYGEDCPQLKDNLISIV 232 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~-~~~~Y~p~~G~----~~fr~a~~~~~~g~~~~~~~~~~i~~~ 232 (420)
+.+.||++.|.|. | ....+.|.+|......+ . ....|.+..|. .++++++++++ |.+ .+
T Consensus 63 g~~~id~~~~~~l---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~-g~~-------~~--- 127 (427)
T 2w8t_A 63 GKDTILLGTYNYM---G-MTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY-GTT-------GA--- 127 (427)
T ss_dssp TEEEEECSCCCTT---C-GGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH-TCS-------EE---
T ss_pred CceEEEEECcccc---c-CCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh-CCC-------ce---
Confidence 4567899999642 3 23455566665554432 1 23345556665 78899998877 432 11
Q ss_pred cccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------
Q psy16707 233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------- 298 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------- 298 (420)
+.+.+|+.|+..++..+ +.| ||.|++++|+|+++...++..|++
T Consensus 128 -------------------i~~~sGs~a~~~al~~l--~~~-gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~ 185 (427)
T 2w8t_A 128 -------------------IVFSTGYMANLGIISTL--AGK-GEYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDK 185 (427)
T ss_dssp -------------------EEESCHHHHHHHHHHHH--SCT-TCEEEEETTCCHHHHHHHHHSCSEEEEECTTCHHHHHH
T ss_pred -------------------EEecCcHHHHHHHHHHh--cCC-CCEEEECCcccHHHHHHHHHcCCeeEEeCCCCHHHHHH
Confidence 55778888888776644 457 899999999999999888777654
Q ss_pred --------------------------------------------------------------------------------
Q psy16707 299 -------------------------------------------------------------------------------- 298 (420)
Q Consensus 299 -------------------------------------------------------------------------------- 298 (420)
T Consensus 186 ~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~ 265 (427)
T 2w8t_A 186 RLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKS 265 (427)
T ss_dssp HHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSST
T ss_pred HHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhh
Confidence
Q ss_pred ---------------hhh---hhh-ccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy16707 299 ---------------KIL---IRA-FYS-SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358 (420)
Q Consensus 299 ---------------~~~---~r~-~~s-~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~ 358 (420)
..+ .+. .++ +++...+..+...|. +.++++.++++++++++.+.+.|++.|
T Consensus 266 ~g~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~-------~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 336 (427)
T 2w8t_A 266 VGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIR-------KLMTAHEKRERLWSNARALHGGLKAMG-- 336 (427)
T ss_dssp TCSCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHH-------HHTSCHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred hccCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHH-------HHhcCHHHHHHHHHHHHHHHHHHHHcC--
Confidence 111 011 112 222222222222221 112346677899999999999999886
Q ss_pred CCCcccCCC-CceEEecCCC-----HHHHHHHHHhCCeEEeCC-----------CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 359 KPWNHITDQ-IGMFCYTGLN-----ATQVEKLIKEHSVYLTKD-----------GRISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 359 ~~w~~i~~q-~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~-----------gRis~ag-l~~~ni~~la~AI~~vv 419 (420)
|..+.+. .|.|.++-++ .+.+++|+ +.||++.|+ .||+++. .+.+.++++.++|.+++
T Consensus 337 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l 412 (427)
T 2w8t_A 337 --FRLGTETCDSAIVAVMLEDQEQAAMMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAG 412 (427)
T ss_dssp --CEESCSSCCSSEEEEEESSHHHHHHHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred --CcccCCCCCCCEEEEEECCHHHHHHHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 5544233 5666665332 24456775 459999763 2899886 47889999999998875
No 111
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=98.73 E-value=3.1e-08 Score=96.55 Aligned_cols=101 Identities=11% Similarity=-0.076 Sum_probs=66.6
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCC--------CCCCCCCCCCHHHHHH-HHHHHcCCCCccccCCce
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL--------DKEYAPIIGAPDFGKL-AAQLAYGEDCPQLKDNLI 229 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~--------~~~Y~p~~G~~~fr~a-~~~~~~g~~~~~~~~~~i 229 (420)
.++.|+|..|. +..++++.|.+|......... ...|.+..+.++++++ +++++ |.+ .|
T Consensus 6 ~~~~i~ld~~~-----~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~-~~~-------~v 72 (371)
T 2e7j_A 6 TKDFINIDPLQ-----TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL-GCD-------VA 72 (371)
T ss_dssp --CCEECCHHH-----HTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT-TSS-------EE
T ss_pred CCCcEEecccc-----cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc-CCC-------EE
Confidence 45678888875 233567788877776543311 1245678899999999 99875 431 23
Q ss_pred eeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 230 SIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
+.|.|||.|+.+++..+ +.| ||+|++++|+|+.+...++..|+
T Consensus 73 ----------------------~~~~g~t~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~g~ 115 (371)
T 2e7j_A 73 ----------------------RVTNGAREAKFAVMHSL--AKK-DAWVVMDENCHYSSYVAAERAGL 115 (371)
T ss_dssp ----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEETTCCHHHHHHHHHTTC
T ss_pred ----------------------EEeCChHHHHHHHHHHH--hCC-CCEEEEccCcchHHHHHHHHcCC
Confidence 67999999999998765 457 89999999999988766655443
No 112
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=98.69 E-value=1.4e-07 Score=91.29 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEEecC------CCHHHH-HHHHHhCCeEEeCCC-------
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYTG------LNATQV-EKLIKEHSVYLTKDG------- 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~~~~------l~~~~v-~~Ll~e~~Vy~~p~g------- 396 (420)
++.++++++++|+.+.+.|++.| +..+.+ ..|+|.|+. .+.+.+ +.| .++||++.++.
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~i 338 (366)
T 1m32_A 264 VAARHQRYQQNQRSLVAGMRALG----FNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRL-KEQGFVIYPGKVSQSDCF 338 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHH-HHTTEECEECCCSSSCEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHCC----CeeccCchhcCceEEEEEcCccCCCCHHHHHHHH-HHCCEEEECCcCCCCCEE
Confidence 67788999999999999999876 444433 367666542 344544 566 46699998751
Q ss_pred cEEEccc-CCCCHHHHHHHHHHHhC
Q psy16707 397 RISMAGV-TSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 397 Ris~agl-~~~ni~~la~AI~~vv~ 420 (420)
||+++.. +.++++++.++|.++++
T Consensus 339 Ri~~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 339 RIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp EEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHH
Confidence 9999876 57889999999998753
No 113
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=98.69 E-value=1.5e-07 Score=92.99 Aligned_cols=86 Identities=19% Similarity=0.185 Sum_probs=62.1
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---CceEEec----CCCHH-HHHHHHHhCCeEEeCC-----
Q psy16707 330 WLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMFCYT----GLNAT-QVEKLIKEHSVYLTKD----- 395 (420)
Q Consensus 330 w~~e-l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~----- 395 (420)
+.++ ++.++++++++|+.+.+.|++.| +..+.++ .+.|.+. +.+.+ .++.|++++||++.++
T Consensus 283 ~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~ 358 (411)
T 3nnk_A 283 ILQEGLDYGIARHKLHGDALVKGIQAMG----LETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLH 358 (411)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGT
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHcC----CEeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCC
Confidence 3444 77888999999999999999987 4444333 2455543 34554 4577888889999874
Q ss_pred -C--cEEEcc-c-CCCCHHHHHHHHHHHh
Q psy16707 396 -G--RISMAG-V-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -g--Ris~ag-l-~~~ni~~la~AI~~vv 419 (420)
+ ||++.+ . +.+.++++.++|++++
T Consensus 359 ~~~iRi~~~~~~~~~~~i~~~~~~l~~~l 387 (411)
T 3nnk_A 359 GKVWRIGTMGYNARKDCVMTTLSALEAVL 387 (411)
T ss_dssp TTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCccCcCCHHHHHHHHHHHHHHH
Confidence 2 999833 3 5788999999998875
No 114
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=98.69 E-value=1.4e-06 Score=84.84 Aligned_cols=84 Identities=11% Similarity=0.267 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-CHHHH-HHHHHhCCeEEeCCC-----cEEEcc-c
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQV-EKLIKEHSVYLTKDG-----RISMAG-V 403 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~~~~v-~~Ll~e~~Vy~~p~g-----Ris~ag-l 403 (420)
..++.+.++++++|+.+.+.|++.| +..+.++.+.|.+..+ +.+.+ +.| .++||++.++. ||+++. .
T Consensus 305 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~Ri~~~~~~ 379 (397)
T 3f9t_A 305 EGQRKIVNECMENTLYLYKKLKENN----FKPVIEPILNIVAIEDEDYKEVCKKL-RDRGIYVSVCNCVKALRIVVMPHI 379 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCCSSSEEEEECTTHHHHHHHH-HHTTCBCEECSSSSEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC----CEEEcCCCccEEEEEeCCHHHHHHHH-HhCCeEEeccCCCCEEEEEEcCCC
Confidence 4556677888999999999999986 4544444455554433 34444 555 56699998864 999984 4
Q ss_pred CCCCHHHHHHHHHHHhC
Q psy16707 404 TSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 404 ~~~ni~~la~AI~~vv~ 420 (420)
+.+.++++.++|.++++
T Consensus 380 ~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 380 KREHIDNFIEILNSIKR 396 (397)
T ss_dssp CHHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHhhC
Confidence 77899999999998763
No 115
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=98.68 E-value=1.1e-07 Score=93.22 Aligned_cols=78 Identities=12% Similarity=0.181 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCC
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKDG----RISMA-GVTSKN 407 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~n 407 (420)
.+.++++++|+.+.+.|++++. . ..+..|+|.|+.++ .+.++.|+ ++||.+.|++ ||++. ..+.++
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~~----~-~~~~~g~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~iRi~~~~~~~~~~ 363 (375)
T 2eh6_A 290 KLLPHVREVGNYFKEKLKELGK----G-KVKGRGLMLGLELERECKDYVLKAL-EKGLLINCTAGKVLRFLPPLIIQKEH 363 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS----S-EEEEETTEEEEECSSCCHHHHHHHH-HTTEECEEETTTEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----C-CceEEEEEEEEEEcCcHHHHHHHHH-HCCCEEecCCCCEEEEECCCCCCHHH
Confidence 5668888999999999998762 2 23456788876443 45567775 6899998743 88876 578889
Q ss_pred HHHHHHHHHHHh
Q psy16707 408 VGYLAKAIHAVT 419 (420)
Q Consensus 408 i~~la~AI~~vv 419 (420)
++++.++|.+++
T Consensus 364 i~~~~~~l~~~l 375 (375)
T 2eh6_A 364 IDRAISVLREIL 375 (375)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998763
No 116
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=98.68 E-value=2.4e-07 Score=91.69 Aligned_cols=82 Identities=16% Similarity=0.268 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC---ceEEec----CCCH-HHHHHHHHhCCeEEeCC------C--c
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI---GMFCYT----GLNA-TQVEKLIKEHSVYLTKD------G--R 397 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~---GmF~~~----~l~~-~~v~~Ll~e~~Vy~~p~------g--R 397 (420)
++.++++++++|+.+.+.|++.| +....++. |.+.+. +.+. +.++.|++++||++.++ + |
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iR 363 (416)
T 3isl_A 288 LETRFERHRHHEAALAAGIKAMG----LRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWR 363 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEE
Confidence 77888999999999999999976 45444432 444443 3444 45578877889999864 1 9
Q ss_pred EEEcc-cCCCC-HHHHHHHHHHHh
Q psy16707 398 ISMAG-VTSKN-VGYLAKAIHAVT 419 (420)
Q Consensus 398 is~ag-l~~~n-i~~la~AI~~vv 419 (420)
|++.+ .+.+. ++++.++|.+++
T Consensus 364 i~~~~~~~~~e~i~~~~~~l~~~~ 387 (416)
T 3isl_A 364 IGTMGYSCRKENVLFVLAGLEAVL 387 (416)
T ss_dssp EECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EecccCCCcHHHHHHHHHHHHHHH
Confidence 99844 46667 999999998875
No 117
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=98.68 E-value=6.6e-08 Score=95.76 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC-----------Cc
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-----------GR 397 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~-----------gR 397 (420)
.+.++++++++|+.+.+.|++.| +..+ +..|.|+|+.++ . +.++.|+ ++||++.++ -|
T Consensus 298 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iR 371 (401)
T 1fc4_A 298 GSELRDRLWANARQFREQMSAAG----FTLA-GADHAIIPVMLGDAVVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIR 371 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT----CCBC-CSSSSEEEEEEECHHHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcC----Cccc-CCCCCEEEEEcCChHHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEE
Confidence 35677899999999999999886 4544 467777775442 2 3446664 569999763 28
Q ss_pred EEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 398 ISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~ag-l~~~ni~~la~AI~~vv 419 (420)
|+++. .+.++++++.++|.+++
T Consensus 372 i~~~~~~~~~~i~~~~~~l~~~~ 394 (401)
T 1fc4_A 372 TQMSAAHTPEQITRAVEAFTRIG 394 (401)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHH
Confidence 99873 58889999999998875
No 118
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.68 E-value=7.7e-08 Score=96.13 Aligned_cols=114 Identities=19% Similarity=0.213 Sum_probs=99.7
Q ss_pred HhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHH
Q psy16707 10 LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NAT 88 (420)
Q Consensus 10 i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~ 88 (420)
..+..|++++..+..++..+|.++++.+.|.++++.++++++..|+.|.+.|++.+ |..+..+.|||.+..+ +.+
T Consensus 294 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~ 369 (418)
T 3rq1_A 294 TSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG----LPMLPYRGGFFITIPTDSAN 369 (418)
T ss_dssp HHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----CCCCCCCSSSEEEEECTTHH
T ss_pred HHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCceEEEEcCCCCHH
Confidence 35667899999999999999999999999999999999999999999999998873 6677889999998755 566
Q ss_pred HHHHHHHhcceEEcCCC---ceecccCCcCCHHHHHHHHHhh
Q psy16707 89 QVEKLIKEHSVYLTKDG---RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 qv~~L~~~~~IY~~~~G---Rinvagl~~~ni~~va~ai~~v 127 (420)
++..+-++++|++.+.+ ||++++++..+++.++++|.++
T Consensus 370 ~~~~~l~~~gi~v~~g~~~iRis~~~~~~~~i~~~~~~l~~~ 411 (418)
T 3rq1_A 370 AICEELKKEHIYVIALANGIRIAACGIPKCQMTGLAEKIYNA 411 (418)
T ss_dssp HHHHHHHHTTEECEECSSEEEEEGGGSCHHHHTTHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 66666688999998866 9999999999999999998876
No 119
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.66 E-value=2.1e-07 Score=91.92 Aligned_cols=84 Identities=17% Similarity=0.285 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCceEEecCC-----CHHHHHHHHHhCCeEEeCC----------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGL-----NATQVEKLIKEHSVYLTKD---------- 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p~---------- 395 (420)
+.++.++++++++++.+.+.|++.| +..+. +..|.|.|+.+ +.+.+...+.++||++.++
T Consensus 277 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~ 352 (407)
T 2dkj_A 277 PEFKEYSRLVVENAKRLAEELARRG----YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPR 352 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCC----ceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCcccccccc
Confidence 4556777999999999999999886 55443 35677777533 4555544447899999763
Q ss_pred ----CcEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707 396 ----GRISMAG-----VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ----gRis~ag-----l~~~ni~~la~AI~~vv 419 (420)
-||+++. .+.+.++++.++|.+++
T Consensus 353 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~ 385 (407)
T 2dkj_A 353 VTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385 (407)
T ss_dssp TCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHH
T ss_pred CCCceeeecccccccCCCHHHHHHHHHHHHHHH
Confidence 1999975 78999999999998875
No 120
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=98.66 E-value=3e-07 Score=91.04 Aligned_cols=86 Identities=16% Similarity=0.224 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEEe--cCCCHHHH-HHHHHhCCeEEeCC-------
Q psy16707 329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCY--TGLNATQV-EKLIKEHSVYLTKD------- 395 (420)
Q Consensus 329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~~--~~l~~~~v-~~Ll~e~~Vy~~p~------- 395 (420)
+|.+.++.++++++++|+.+.+.|+++. + +....+ ..+++.+ .+.+.+.+ +.| .++||++.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gi~v~~g~~~~~~~ 371 (406)
T 3cai_A 296 RLAVSMQSADAYLNRVFDYLMVSLRSLP--L-VMLIGRPEAQIPVVSFAVHKVPADRVVQRL-ADNGILAIANTGSRVLD 371 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCT--T-EEECCCCSSBCSEEEEEETTBCHHHHHHHH-HHTTEECEECCSCHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCC--C-eEEcCCccccCCEEEEEECCcCHHHHHHHH-HHCCcEEecCChHHHHH
Confidence 3444678888999999999999999852 1 443333 2555443 24455555 555 6789999753
Q ss_pred --------C--cEEEccc-CCCCHHHHHHHHHHH
Q psy16707 396 --------G--RISMAGV-TSKNVGYLAKAIHAV 418 (420)
Q Consensus 396 --------g--Ris~agl-~~~ni~~la~AI~~v 418 (420)
+ ||++... +.++++++.++|.++
T Consensus 372 ~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 372 VLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred HcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 2 9998864 467899999998864
No 121
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=98.64 E-value=5.6e-07 Score=89.51 Aligned_cols=83 Identities=12% Similarity=0.188 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCC----ceEEe--cCCCHHHHHHHHHhCCeEEeCC--------
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQI----GMFCY--TGLNATQVEKLIKEHSVYLTKD-------- 395 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~----GmF~~--~~l~~~~v~~Ll~e~~Vy~~p~-------- 395 (420)
.++++.++++++++|+.+.+.|+++ | +....++. +++.+ .+.+.+.+...+.+ |++.++
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~ 352 (423)
T 3lvm_A 279 KEEMATEMERLRGLRNRLWNGIKDIEE----VYLNGDLEHGAPNILNVSFNYVEGESLIMALKD--LAVSSGSACTSASL 352 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTT----EEEESCSTTBCTTEEEEEETTSCHHHHHHHTTT--EECBCCCC-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC----EEEeCCccccCCCeEEEEeCCCCHHHHHHHHhh--heeccCccccCCCc
Confidence 3447888899999999999999876 4 44444432 34432 35566655444445 877664
Q ss_pred -----------------C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 396 -----------------G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -----------------g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
+ ||+++.. +.+++++++++|.+++
T Consensus 353 ~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~ 396 (423)
T 3lvm_A 353 EPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI 396 (423)
T ss_dssp CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 2 9998844 5588999999998875
No 122
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=98.64 E-value=3e-07 Score=91.20 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC-------C----cE
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-------G----RI 398 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~-------g----Ri 398 (420)
+.++++++++++.+.+.|++.| +..+.++.+ |.|+.++ . +.++.|++++||++.|+ | ||
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRi 375 (401)
T 2bwn_A 301 QKLRDAQQMHAKVLKMRLKALG----MPIIDHGSH-IVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRF 375 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT----CCBCCCSSS-CEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCC----CcccCCCCC-eEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEE
Confidence 6677899999999999999886 555555555 5554332 2 34467767899999642 2 89
Q ss_pred EEcc-cCCCCHHHHHHHHHHHh
Q psy16707 399 SMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~ag-l~~~ni~~la~AI~~vv 419 (420)
+++. .+.+.++++.++|.+++
T Consensus 376 s~~~~~t~~~i~~~~~~l~~~~ 397 (401)
T 2bwn_A 376 TPSPVHDLKQIDGLVHAMDLLW 397 (401)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHC
T ss_pred EeeCCCCHHHHHHHHHHHHHHH
Confidence 9874 47788999999998875
No 123
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=98.63 E-value=2.7e-07 Score=91.29 Aligned_cols=99 Identities=15% Similarity=0.093 Sum_probs=69.0
Q ss_pred CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCC-CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707 158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYA-PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS 236 (420)
Q Consensus 158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~-p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~ 236 (420)
+-+++++++.|. |..++.|.++....... ..|. +..|..+|++++++++ |.+ .+
T Consensus 20 ~~~~~~~l~~~~-------p~~~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~-~~~-------~~------- 74 (391)
T 3dr4_A 20 HMSDLPRISVAA-------PRLDGNERDYVLECMDT---TWISSVGRFIVEFEKAFADYC-GVK-------HA------- 74 (391)
T ss_dssp --------CCCC-------CCCCSSHHHHHHHHHHH---TCCSSCSHHHHHHHHHHHHHH-TCS-------EE-------
T ss_pred hcCCCceeccCC-------CCCCHHHHHHHHHHHHc---CCccCCChHHHHHHHHHHHHh-CCC-------cE-------
Confidence 346788998885 34456677666665542 3566 7789999999999987 322 12
Q ss_pred CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.|||.|+.+++..+ .+.| ||+|++++|+|+.+...++..|++
T Consensus 75 ---------------i~~~~gt~al~~~l~~~-~~~~-gd~vl~~~~~~~~~~~~~~~~g~~ 119 (391)
T 3dr4_A 75 ---------------IACNNGTTALHLALVAM-GIGP-GDEVIVPSLTYIASANSVTYCGAT 119 (391)
T ss_dssp ---------------EEESSHHHHHHHHHHHH-TCCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred ---------------EEeCCHHHHHHHHHHHc-CCCC-cCEEEECCCchHHHHHHHHHCCCE
Confidence 56899999999988755 2457 899999999999999999888775
No 124
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=98.61 E-value=3.7e-07 Score=90.34 Aligned_cols=83 Identities=19% Similarity=0.229 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCC
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTKDG----RISMA-GVTSKN 407 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~n 407 (420)
.+.++++++|+.+.+.|++++.+ +....+..|.|+|+.+ ..+.++.|++++||.+.|++ ||+++ ..+.++
T Consensus 305 ~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~~ 382 (395)
T 1vef_A 305 RLWERAAELGPWFMEKLRAIPSP--KIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKED 382 (395)
T ss_dssp TTHHHHHHHHHHHHHHHHTSCCT--TEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhhcC--ceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHH
Confidence 46688899999999999987642 2111335677776543 34566778658899999864 88765 467789
Q ss_pred HHHHHHHHHHHhC
Q psy16707 408 VGYLAKAIHAVTK 420 (420)
Q Consensus 408 i~~la~AI~~vv~ 420 (420)
++++.++|.++++
T Consensus 383 i~~~~~~l~~~l~ 395 (395)
T 1vef_A 383 LERVVEAVRAVLA 395 (395)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998764
No 125
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.61 E-value=1.7e-07 Score=91.46 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC----CceEEec---CCCHHHH-HHHHHhCCeEEeCCC-------cE
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCYT---GLNATQV-EKLIKEHSVYLTKDG-------RI 398 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q----~GmF~~~---~l~~~~v-~~Ll~e~~Vy~~p~g-------Ri 398 (420)
++.++++++++++.+.+.|++.| +..+.++ .|.|.++ +.+.+.+ +.| .++||++.++. ||
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~iRi 338 (384)
T 3zrp_A 264 IENRIKRHTMVASAIRAGLEALG----LEIVARRPESYSNTVTGVILKVADPQKVLAGT-VNEGVEFAPGVHPAFKYFRI 338 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CCBSCSSGGGBCSSEEEEECSSSCHHHHHHHH-HTTTCCCEECCCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC----CeEccCcccccCccEEEEECCCCCHHHHHHHH-HHCCEEEecCCCCCcCEEEE
Confidence 67888999999999999999886 5555544 4556543 3345444 555 56699999875 99
Q ss_pred EEcc-cCCCCHHHHHHHHHHHh
Q psy16707 399 SMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~ag-l~~~ni~~la~AI~~vv 419 (420)
++.. .+.++++++.++|++++
T Consensus 339 ~~~~~~~~e~i~~~~~~l~~~l 360 (384)
T 3zrp_A 339 GHMGWVTPNDAIIAISVIERTL 360 (384)
T ss_dssp ECCSSCCHHHHHHHHHHHHHHH
T ss_pred eccccCCHHHHHHHHHHHHHHH
Confidence 9764 46688999999998875
No 126
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=98.53 E-value=2.3e-07 Score=89.16 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC--CceEEec----CCCHHHH-HHHHHhCCeEEeCC--------CcE
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ--IGMFCYT----GLNATQV-EKLIKEHSVYLTKD--------GRI 398 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q--~GmF~~~----~l~~~~v-~~Ll~e~~Vy~~p~--------gRi 398 (420)
++.++++++++|+.+.+.|++.| +..+.++ .+++.++ +.+.+.+ +.| .++||++.++ -||
T Consensus 253 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRi 327 (353)
T 2yrr_A 253 VAARERRAREVYAWVLEELKARG----FRPYPKASPLPTVLVVRPPEGVDADRLVRAL-YAEGVAVAGGIGPTRGQVLRL 327 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CEESCSSSBCTTEEEEECCTTCCHHHHHHHH-HHTTEECEECCGGGTTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC----CccccCccCCCeEEEEECCCCCCHHHHHHHH-HHCCEEEeCCccccCCCeEEE
Confidence 67788999999999999999875 5544443 4544433 3455555 555 5669999863 299
Q ss_pred EE-cccCCCCHH-HHHHHHHHHh
Q psy16707 399 SM-AGVTSKNVG-YLAKAIHAVT 419 (420)
Q Consensus 399 s~-agl~~~ni~-~la~AI~~vv 419 (420)
++ ...+.++++ ++.++|.+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~l 350 (353)
T 2yrr_A 328 GLMGEGARREAYQAFLKALDRAL 350 (353)
T ss_dssp ECSGGGSCHHHHHHHHHHHHHHH
T ss_pred ecCccCCHHHHHHHHHHHHHHHH
Confidence 98 557888999 9999999875
No 127
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=98.50 E-value=8.6e-07 Score=92.00 Aligned_cols=112 Identities=12% Similarity=0.204 Sum_probs=94.5
Q ss_pred hccCCCccchHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CC
Q psy16707 12 RAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GL 85 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~----~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--gL 85 (420)
+..+++||..|..++..+|+++ .++++|.++++.++++++..|..|.+.|++. + .|..+..|.|||.+. .+
T Consensus 347 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--~-g~~~~~~~g~~~~~~~~~l 423 (500)
T 3tcm_A 347 ASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL--E-GITCNEAEGAMYVFPQICL 423 (500)
T ss_dssp HHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--T-TEECCCCCBTTEECCEECC
T ss_pred HhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--C-CcEEecCCeEEEEeeeecC
Confidence 4578999999999999999954 5889999999999999999999999999876 3 388888899999995 44
Q ss_pred CHHH---------------HHHHHHhcceEEcC-------CC----ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 NATQ---------------VEKLIKEHSVYLTK-------DG----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~~q---------------v~~L~~~~~IY~~~-------~G----Rinvagl~~~ni~~va~ai~~v 127 (420)
.+.. +..|.++++||+.+ .| ||+++ .+..+++.++++|.++
T Consensus 424 p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~ 490 (500)
T 3tcm_A 424 PQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVF 490 (500)
T ss_dssp CHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHH
T ss_pred chhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHH
Confidence 4332 45677889999973 45 99999 8999999999998876
No 128
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.49 E-value=6.3e-07 Score=87.63 Aligned_cols=82 Identities=21% Similarity=0.279 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC----CceEEec----CCCH-HHHHHHHHhCCeEEeCCC--------
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCYT----GLNA-TQVEKLIKEHSVYLTKDG-------- 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q----~GmF~~~----~l~~-~~v~~Ll~e~~Vy~~p~g-------- 396 (420)
++.+.++++++|+.+.+.|++.| +..+.+. .+.+.+. +.+. +..++|++++||++.++.
T Consensus 285 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 360 (393)
T 3kgw_A 285 LENCWRRHREATAHLHKHLQEMG----LKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERVL 360 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEE
Confidence 67788999999999999999986 4444222 2455443 3344 455788777899999741
Q ss_pred cEEEccc--CCCCHHHHHHHHHHHh
Q psy16707 397 RISMAGV--TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 Ris~agl--~~~ni~~la~AI~~vv 419 (420)
||++.+. +.++++++.++|.+++
T Consensus 361 Ri~~~~~~~~~~~i~~~~~~l~~~l 385 (393)
T 3kgw_A 361 RIGLLGYNATTENVDRVAEALREAL 385 (393)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHHH
T ss_pred EEEecccCCCHHHHHHHHHHHHHHH
Confidence 9998443 7889999999998875
No 129
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=98.48 E-value=2.3e-06 Score=85.91 Aligned_cols=93 Identities=18% Similarity=0.111 Sum_probs=72.4
Q ss_pred eecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCC-CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccc
Q psy16707 164 NLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAP-IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLR 242 (420)
Q Consensus 164 nL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p-~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 242 (420)
+|++|. ++ ++.++.|.++....... ..|.+ ..|.++|++++++++ |.+ +|
T Consensus 20 ~l~~~~---p~--~~~p~~~~~a~~~~~~~---~~y~~~~~~~~~l~~~la~~~-~~~-------~v------------- 70 (424)
T 2po3_A 20 PLLVGR---PN--RIDRARLYERLDRALDS---QWLSNGGPLVREFEERVAGLA-GVR-------HA------------- 70 (424)
T ss_dssp CEETTC---CC--CCCHHHHHHHHHHHHHH---TCCSSSCHHHHHHHHHHHHHH-TSS-------EE-------------
T ss_pred cccccC---CC--CCChHHHHHHHHHHHhc---CCcccCCHHHHHHHHHHHHHh-CCC-------eE-------------
Confidence 688885 44 34567787777766543 24877 789999999999987 421 23
Q ss_pred cccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 243 VGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 243 ~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.|.|||.|+.+++..+. + ||+|++++|+|+.|...++..|++
T Consensus 71 ---------~~~~ggt~al~~~l~~l~---~-gd~Vlv~~~~~~~~~~~~~~~G~~ 113 (424)
T 2po3_A 71 ---------VATCNATAGLQLLAHAAG---L-TGEVIMPSMTFAATPHALRWIGLT 113 (424)
T ss_dssp ---------EEESCHHHHHHHHHHHHT---C-CSEEEEESSSCTHHHHHHHHTTCE
T ss_pred ---------EEeCCHHHHHHHHHHHcC---C-CCEEEECCCccHHHHHHHHHcCCE
Confidence 679999999999987653 6 899999999999999988888764
No 130
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=98.46 E-value=2.6e-06 Score=83.99 Aligned_cols=85 Identities=14% Similarity=0.058 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHH
Q psy16707 181 PSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGS 260 (420)
Q Consensus 181 ~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtga 260 (420)
+.|.+|....... ....|.+..+..+|++++++++ |.. +. +.+.+||.|
T Consensus 17 ~~~~~a~~~~l~~-~~~~~~~~~~~~~l~~~la~~~-~~~------~~-----------------------i~~~sGt~a 65 (388)
T 1b9h_A 17 DAERNGLVRALEQ-GQWWRMGGDEVNSFEREFAAHH-GAA------HA-----------------------LAVTNGTHA 65 (388)
T ss_dssp HHHHHHHHHHHHT-SCCBTTTCSHHHHHHHHHHHHT-TCS------EE-----------------------EEESCHHHH
T ss_pred HHHHHHHHHHHHc-CCeeecCCHHHHHHHHHHHHHh-CCC------eE-----------------------EEeCCHHHH
Confidence 6777777766643 3456888889999999999976 422 11 334556999
Q ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 261 l~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+++..+. +.| ||.|++++|+|+.+...++..|++
T Consensus 66 l~~~l~~l~-~~~-gd~Vi~~~~~~~~~~~~~~~~g~~ 101 (388)
T 1b9h_A 66 LELALQVMG-VGP-GTEVIVPAFTFISSSQAAQRLGAV 101 (388)
T ss_dssp HHHHHHHTT-CCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred HHHHHHHcC-CCC-cCEEEECCCccHHHHHHHHHcCCE
Confidence 999887541 457 899999999999999988888764
No 131
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=98.44 E-value=1.1e-06 Score=88.45 Aligned_cols=101 Identities=13% Similarity=0.142 Sum_probs=70.9
Q ss_pred CceeecccccccCCCC--CCchHHHHHHHHHHHccCCCCCCCCCCCCH---HHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707 161 NKINLGVGAYRDDQGK--PYVLPSVKQADEIVLNKNLDKEYAPIIGAP---DFGKLAAQLAYGEDCPQLKDNLISIVQGI 235 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~--~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~---~fr~a~~~~~~g~~~~~~~~~~i~~~~~~ 235 (420)
+..++++|. ||-. +++.+.++++.+...+....+.|.+ .|.+ +|++++++++ |.+ .+
T Consensus 19 ~~~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~-g~~-------~~------ 80 (404)
T 1e5e_A 19 KDQFGAAIP---PIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE-KTE-------AC------ 80 (404)
T ss_dssp CCTTCCSSC---CCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH-TCS-------EE------
T ss_pred CCCCCCcCC---CCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh-CCC-------cE------
Confidence 446788885 5542 2334555555443323335678988 7888 8999999987 321 12
Q ss_pred CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH----HHhhcCcc
Q psy16707 236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP----ICKHTGLE 298 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~----i~~~aG~~ 298 (420)
+.+.||+.|+.+++..+ +.| ||.|++++|+|+.|.. .++..|++
T Consensus 81 ----------------i~~~~g~~ai~~~~~~l--~~~-gd~Vl~~~~~y~~~~~~~~~~~~~~g~~ 128 (404)
T 1e5e_A 81 ----------------VATSSGMGAIAATVLTI--LKA-GDHLISDECLYGCTHALFEHALTKFGIQ 128 (404)
T ss_dssp ----------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred ----------------EEeCChHHHHHHHHHHH--hCC-CCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence 56889999999888644 457 9999999999999888 67777764
No 132
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=98.43 E-value=1e-06 Score=86.89 Aligned_cols=83 Identities=19% Similarity=0.183 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC----ceEEec--CCCHHHH-HHHHHhCCeEEeCC--------
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCYT--GLNATQV-EKLIKEHSVYLTKD-------- 395 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~----GmF~~~--~l~~~~v-~~Ll~e~~Vy~~p~-------- 395 (420)
.+.++.++++++++|+.+.+.|+..| +....++. +++.+. +.+.+.+ +.| . +||++.+|
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~-~gi~v~~g~~~~~~~~ 352 (400)
T 3vax_A 279 EAEHAQWQVAAQDLRSRLLAGLASTS----FQVNGDQDHVVPHILNLSFEDVDAEAFLVTL-K-DLVAVATGSASTSASF 352 (400)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHTTTT----CEECSCTTSBCTTEEEEECTTCCHHHHHHHH-H-HHHHHTTTTEEEEEEE
T ss_pred HhhHHHHHHHHHHHHHHHHHhhCCCC----EEEeCCcccCCCCEEEEEeCCCCHHHHHHHH-h-cCcEEEecccccCCCC
Confidence 34567788999999999999998323 55555443 344432 4455555 555 5 89988763
Q ss_pred -----------------C--cEEE-c-ccCCCCHHHHHHHHHHHh
Q psy16707 396 -----------------G--RISM-A-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -----------------g--Ris~-a-gl~~~ni~~la~AI~~vv 419 (420)
+ ||++ . ..+.+.++++.++|.+++
T Consensus 353 ~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 397 (400)
T 3vax_A 353 TPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK 397 (400)
T ss_dssp CCHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred CccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence 3 9998 3 457889999999998875
No 133
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=98.42 E-value=3.2e-07 Score=92.52 Aligned_cols=112 Identities=14% Similarity=0.088 Sum_probs=90.0
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
+++.+.+. ..+||.++..++..+|.+.. .+| ++.+++|++.+|+.|.+.|++. | .|.++..+.|||.++++
T Consensus 291 ~l~~~~~~-~~~~~~~~~~a~~~~L~~~~--~~~---~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~p~~g~~~~~~l 361 (427)
T 3dyd_A 291 GLVKLSQR-ILGPCTIVQGALKSILCRTP--GEF---YHNTLSFLKSNADLCYGALAAI--P-GLRPVRPSGAMYLMVGI 361 (427)
T ss_dssp HHHHHHHH-HCCSCHHHHHHHHHHHHHSC--HHH---HHHHHHHHHHHHHHHHHHHHHS--T-TEEEECCSBTTEEEEEE
T ss_pred HHHHHHhc-cCCCCHHHHHHHHHHHHhcC--HHH---HHHHHHHHHHHHHHHHHHHhcC--C-CceecCCCeeEEEEEec
Confidence 44444444 56788999999999998532 344 5678899999999999999876 3 37888889999999876
Q ss_pred C----------HHHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 N----------ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~----------~~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v 127 (420)
+ .+.+++|.++++||+.+.+ ||+++ .++++|++.+++|.++
T Consensus 362 ~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~ 420 (427)
T 3dyd_A 362 EMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT-VPEVMMLEACSRIQEF 420 (427)
T ss_dssp CGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC-SCHHHHHHHHHHHHHH
T ss_pred CHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC-CCHHHHHHHHHHHHHH
Confidence 5 5678889889999998653 99987 8999999999998875
No 134
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.36 E-value=2.9e-06 Score=84.06 Aligned_cols=85 Identities=12% Similarity=0.166 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCceEEec-----CCCHHHHHHHHHhCCeEEeCC---------
Q psy16707 331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT-----GLNATQVEKLIKEHSVYLTKD--------- 395 (420)
Q Consensus 331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p~--------- 395 (420)
.++++.+++++.++++.+.+.|++.| |.... ...+.|.|+ +++.+++..+++++||++.+.
T Consensus 277 ~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~ 352 (417)
T 3n0l_A 277 SDEWKVYAKQVRTNAQVLANVLMDRK----FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSP 352 (417)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCC----ceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCccc
Confidence 35667778899999999999999876 44333 133445553 346778877778999998732
Q ss_pred -----CcEEEccc-----CCCCHHHHHHHHHHHh
Q psy16707 396 -----GRISMAGV-----TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -----gRis~agl-----~~~ni~~la~AI~~vv 419 (420)
-||++..+ ++++|++++++|.+++
T Consensus 353 ~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l 386 (417)
T 3n0l_A 353 FITSGLRLGTPALTARGFKEKEMEIVSNYIADIL 386 (417)
T ss_dssp TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 27777654 5689999999998875
No 135
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=98.35 E-value=2e-06 Score=85.08 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-CCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCCC----cEEEc-
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKDG----RISMA- 401 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~-~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~g----Ris~a- 401 (420)
+.+.++++++|+.+.+.|++++.. ..|..+ ...|.|.++.+ +. +.++.|+ +.||++.|++ ||+++
T Consensus 302 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~iRi~~~~ 379 (406)
T 4adb_A 302 PEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLNADYAGQAKQISQEAA-KAGVMVLIAGGNVVRFAPAL 379 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECTTTTTCHHHHHHHHH-HTTEECEESSTTEEEECCCT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEeCCcHHHHHHHHHHHH-HCCcEEeecCCCeEEEECCC
Confidence 456678888888888888776421 012222 23466665422 23 4456664 6699999875 78533
Q ss_pred ccCCCCHHHHHHHHHHHh
Q psy16707 402 GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 402 gl~~~ni~~la~AI~~vv 419 (420)
..+.+.++++.++|.+++
T Consensus 380 ~~~~e~i~~~~~~l~~~l 397 (406)
T 4adb_A 380 NVSEEEVTTGLDRFAAAC 397 (406)
T ss_dssp TCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 357788999999888765
No 136
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=98.34 E-value=8e-07 Score=86.00 Aligned_cols=86 Identities=15% Similarity=0.016 Sum_probs=61.0
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS 240 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 240 (420)
..||+..++. +++.+.|+++..... .....|.|..|.++|++++++++ |.+ .+
T Consensus 4 ~~i~~~~~~~------~~p~~~~~~a~~~~~--~~~~~y~~~~~~~~l~~~la~~~-g~~-------~~----------- 56 (347)
T 1jg8_A 4 MMIDLRSDTV------TKPTEEMRKAMAQAE--VGDDVYGEDPTINELERLAAETF-GKE-------AA----------- 56 (347)
T ss_dssp -CEECSCGGG------CCCCHHHHHHHHTCC--CCCGGGTCCHHHHHHHHHHHHHH-TCS-------EE-----------
T ss_pred eEEEeccccC------CCCCHHHHHHHhcCC--CCCcccCCChHHHHHHHHHHHHh-CCc-------eE-----------
Confidence 4578888872 345577777765432 12347888889999999999976 432 12
Q ss_pred cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707 241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN 287 (420)
Q Consensus 241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n 287 (420)
+.+.|||.|+.+++..+ +.| ||+|++++|+|+.
T Consensus 57 -----------~~~~~gt~a~~~~~~~~--~~~-gd~Vl~~~~~~~~ 89 (347)
T 1jg8_A 57 -----------LFVPSGTMGNQVSIMAH--TQR-GDEVILEADSHIF 89 (347)
T ss_dssp -----------EEESCHHHHHHHHHHHH--CCT-TCEEEEETTCHHH
T ss_pred -----------EEecCcHHHHHHHHHHh--cCC-CCEEEEcCcchhh
Confidence 56888998888776543 457 9999999999864
No 137
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=98.34 E-value=7e-06 Score=81.34 Aligned_cols=82 Identities=9% Similarity=0.093 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CCCCCCcccCCC----CceEEecCCC-HH-HHHHHHHhCCeEEeCC--C--cE
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKE----GSNKPWNHITDQ----IGMFCYTGLN-AT-QVEKLIKEHSVYLTKD--G--RI 398 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~----g~~~~w~~i~~q----~GmF~~~~l~-~~-~v~~Ll~e~~Vy~~p~--g--Ri 398 (420)
.++.++++++++|+.+.+.|++. | +..+.++ .|.|.++.++ .+ .++.| .++||++... + ||
T Consensus 302 ~~~~~~~~~~~~~~~l~~~L~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~~~~~~~~~lRi 376 (416)
T 1qz9_A 302 DMASLRRKSLALTDLFIELVEQRCAAHE----LTLVTPREHAKRGSHVSFEHPEGYAVIQAL-IDRGVIGDYREPRIMRF 376 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTSC----CEECSCSSGGGBCSEEEEECTTHHHHHHHH-HTTTEECEEETTTEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhccCCC----eEEeCCCCHHHcCCEEEEecCCHHHHHHHH-HhCCcEeccCCCCeEEE
Confidence 45667789999999999999886 5 5544443 2445554433 44 44555 5789998652 2 99
Q ss_pred EEc--ccCCCCHHHHHHHHHHHh
Q psy16707 399 SMA--GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~a--gl~~~ni~~la~AI~~vv 419 (420)
+++ ..+.+++++++++|.+++
T Consensus 377 s~~~~~~t~~~i~~~~~~l~~~~ 399 (416)
T 1qz9_A 377 GFTPLYTTFTEVWDAVQILGEIL 399 (416)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHHH
T ss_pred eCcccCCCHHHHHHHHHHHHHHH
Confidence 997 578999999999998875
No 138
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=98.33 E-value=8e-06 Score=80.29 Aligned_cols=83 Identities=16% Similarity=0.137 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHH
Q psy16707 181 PSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGS 260 (420)
Q Consensus 181 ~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtga 260 (420)
+.|.+|......+ . .|.+..|..+|++++++++ |.+ .+ +.|.|||.|
T Consensus 20 ~~~~~a~~~~~~~-~--~~~~~~~~~~l~~~la~~~-~~~-------~~----------------------~~~~~gt~a 66 (393)
T 1mdo_A 20 AEELAAVKTVLDS-G--WITTGPKNQELEAAFCRLT-GNQ-------YA----------------------VAVSSATAG 66 (393)
T ss_dssp HHHHHHHHHHHHH-T--CCSSSHHHHHHHHHHHHHH-CCS-------EE----------------------EEESCHHHH
T ss_pred HHHHHHHHHHHhc-C--CcCCChHHHHHHHHHHHHh-CCC-------cE----------------------EEecChHHH
Confidence 5556666655533 2 3556678999999999987 321 22 678999999
Q ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 261 l~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+++..+. +.| ||+|++++|+|+.+...++..|++
T Consensus 67 l~~~~~~~~-~~~-gd~Vl~~~~~~~~~~~~~~~~g~~ 102 (393)
T 1mdo_A 67 MHIALMALG-IGE-GDEVITPSMTWVSTLNMIVLLGAN 102 (393)
T ss_dssp HHHHHHHTT-CCT-TCEEEEESSSCHHHHHHHHHTTCE
T ss_pred HHHHHHHcC-CCC-CCEEEeCCCccHhHHHHHHHCCCE
Confidence 999987541 457 899999999999999988888764
No 139
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.32 E-value=4.1e-06 Score=82.57 Aligned_cols=85 Identities=24% Similarity=0.362 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEecC-----CCHHHHHHHHHhCCeEEeCC----------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYTG-----LNATQVEKLIKEHSVYLTKD---------- 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~~~-----l~~~~v~~Ll~e~~Vy~~p~---------- 395 (420)
+.++.++++++++|+.+.+.|++.| +..+.+ ..|.|.|+. .+.+.+...+.++||++.++
T Consensus 276 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~ 351 (405)
T 2vi8_A 276 DDFKAYAKRVVDNAKRLASALQNEG----FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPF 351 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCC
Confidence 3556777999999999999999886 554443 357777653 34555544557899999762
Q ss_pred --C--cEEEcc-----cCCCCHHHHHHHHHHHhC
Q psy16707 396 --G--RISMAG-----VTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 396 --g--Ris~ag-----l~~~ni~~la~AI~~vv~ 420 (420)
+ |||++. ++.+.++++.++|.++++
T Consensus 352 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 385 (405)
T 2vi8_A 352 VTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK 385 (405)
T ss_dssp TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred CCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHh
Confidence 1 999985 689999999999998753
No 140
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.31 E-value=3.5e-06 Score=83.45 Aligned_cols=84 Identities=21% Similarity=0.284 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEec-----CCCHHHHHHHHHhCCeEEe----CC------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLT----KD------ 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~----p~------ 395 (420)
++++.+.++++++++.+.+.|++.| |..+.+ ..|.|.|+ +.+.+.+..+++++||++. |+
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~ 361 (425)
T 3ecd_A 286 DDFKTYIDRVLANAQALGDVLKAGG----VDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPT 361 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCC----CeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCC
Confidence 4556777899999999999999877 554443 35666664 3456777777789999998 54
Q ss_pred --C--cEEEcccC-----CCCHHHHHHHHHHHh
Q psy16707 396 --G--RISMAGVT-----SKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g--Ris~agl~-----~~ni~~la~AI~~vv 419 (420)
+ ||++..++ .+.+++++++|.+++
T Consensus 362 ~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l 394 (425)
T 3ecd_A 362 ITSGIRLGTPAGTTRGFGAAEFREVGRLILEVF 394 (425)
T ss_dssp TCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CccceeccchhheeccCCHHHHHHHHHHHHHHH
Confidence 1 66644443 588999999998875
No 141
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=98.29 E-value=2.7e-06 Score=84.74 Aligned_cols=99 Identities=12% Similarity=0.036 Sum_probs=66.1
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCC--CCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLD--KEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~--~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
...||++.|.+-.+-| + .++.|.+|.....++... ..|.|..|.+++++++++++-| + .+++|
T Consensus 41 ~~~id~~~~~~~~~lg-~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~----~~~~v-------- 105 (426)
T 1sff_A 41 REYLDFAGGIAVLNTG-H-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPG-D----FAKKT-------- 105 (426)
T ss_dssp CEEEESSHHHHTCTTC-B-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSC-S----SCEEE--------
T ss_pred CEEEEcccChhhcccC-C-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCc-c----cccEE--------
Confidence 4578998887433445 2 556677776665543211 2577888999999999998743 1 12444
Q ss_pred CCccccccccccceeecccchHHHHHHHHHH-HhcCCCCCEEEEcCCCCCCcH
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFL-KNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l-~~~~p~gd~VlvpdP~w~ny~ 289 (420)
+.|.||+.|+.+++.+. ....| + .|++++|+|+.+.
T Consensus 106 --------------~~~~g~~~a~~~~~~~a~~~~~~-~-~vi~~~p~y~~~~ 142 (426)
T 1sff_A 106 --------------LLVTTGSEAVENAVKIARAATKR-S-GTIAFSGAYHGRT 142 (426)
T ss_dssp --------------EEESSHHHHHHHHHHHHHHHHTC-C-EEEEETTCCCCSS
T ss_pred --------------EEeCchHHHHHHHHHHHHHhhCC-C-eEEEECCCcCCCc
Confidence 56999999999987621 11234 4 8999999997543
No 142
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=98.25 E-value=3.4e-06 Score=87.23 Aligned_cols=84 Identities=20% Similarity=0.311 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC-CceEEec-----CCCHHHHHHHHHhCCeEEe----CC------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ-IGMFCYT-----GLNATQVEKLIKEHSVYLT----KD------ 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q-~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~----p~------ 395 (420)
.+++.+.+++.++|+.+.+.|++.| +..+.+. ...+.++ +++.+++..++++.||.+. |+
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~ 396 (483)
T 1rv3_A 321 PEFKEYQRQVVANCRALSAALVELG----YKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALR 396 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcC----CEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCC
Confidence 3456777899999999999999887 5544432 2234442 5567777777789999998 64
Q ss_pred --C-cEEEcccC-----CCCHHHHHHHHHHHh
Q psy16707 396 --G-RISMAGVT-----SKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g-Ris~agl~-----~~ni~~la~AI~~vv 419 (420)
+ ||+++..+ ++++++++++|.+++
T Consensus 397 ~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l 428 (483)
T 1rv3_A 397 PSGLRLGTPALTSRGLLEKDFQKVAHFIHRGI 428 (483)
T ss_dssp CCEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CceEEeecCCcccCCCCHHHHHHHHHHHHHHH
Confidence 1 99998654 689999999998875
No 143
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=98.25 E-value=1.8e-05 Score=81.77 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec--CCCHHHH-HHHHHhCCeEEeCC-----CcEEEccc-
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNATQV-EKLIKEHSVYLTKD-----GRISMAGV- 403 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~--~l~~~~v-~~Ll~e~~Vy~~p~-----gRis~agl- 403 (420)
.++.+.+++.+.++.+.+.|+++. .+..+.++.+++.+. +.+...+ ++| .+.||++... .|++++..
T Consensus 374 ~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~Gi~v~g~~~~~~~Ri~~~~~~ 449 (514)
T 3mad_A 374 GYLDATRRILQAADRLKAGVRAIP---SLKILGDPLWVIAVASDELNIYQVMEEM-AGRGWRLNGLHRPPAFHVALTLRH 449 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTST---TCEESSCCSSEEEEECSSSCHHHHHHHH-HTTTCBCEEETTTTEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCC---CeEEeCCCeEEEEEeCCCCCHHHHHHHH-HhcCCEeccCCCCCeEEEEEecCC
Confidence 355666888999999999999862 166666777766653 3455555 555 5779988321 28888744
Q ss_pred -CCCCHHHHHHHHHHHh
Q psy16707 404 -TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 404 -~~~ni~~la~AI~~vv 419 (420)
+.+.++.+.++|.+++
T Consensus 450 ~~~e~i~~~l~~L~~~l 466 (514)
T 3mad_A 450 TEPGVVDRFLADLQDAV 466 (514)
T ss_dssp GSTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 4579999999998875
No 144
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=98.23 E-value=1.2e-05 Score=84.06 Aligned_cols=84 Identities=13% Similarity=0.279 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEec-----CCCHHHHHHHHHhCCeEEeC----C------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLTK----D------ 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p----~------ 395 (420)
.+.+++.+++.+.++.|.+.|++.| |..+.. ....+.|+ +++.++++.++++.||++.+ +
T Consensus 331 ~~~~~~~~~~~~na~~L~~~L~~~G----~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~ 406 (490)
T 2a7v_A 331 PMFREYSLQVLKNARAMADALLERG----YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAIT 406 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcC----cEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCC
Confidence 3446666888889999999999988 554432 12233443 45667787777899999963 2
Q ss_pred --C-cEEEc-----ccCCCCHHHHHHHHHHHh
Q psy16707 396 --G-RISMA-----GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --g-Ris~a-----gl~~~ni~~la~AI~~vv 419 (420)
| ||+.. |++++.+++++++|++++
T Consensus 407 ~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l 438 (490)
T 2a7v_A 407 PGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp CSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCceEecccccccCCCCHHHHHHHHHHHHHHH
Confidence 1 77654 357789999999999875
No 145
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.23 E-value=1.7e-05 Score=77.32 Aligned_cols=82 Identities=16% Similarity=0.103 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhcCCCCCCcccCC-----CCceEEecCCC-H-HHHHHHHHhCCeEEeCC-------C--
Q psy16707 334 VKGMADRIISMRQSLKDNL-QKEGSNKPWNHITD-----QIGMFCYTGLN-A-TQVEKLIKEHSVYLTKD-------G-- 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L-~~~g~~~~w~~i~~-----q~GmF~~~~l~-~-~~v~~Ll~e~~Vy~~p~-------g-- 396 (420)
++.++++++++|+.+.+.| +++| +..+.+ ..|.|.++.++ . +.+++| .++||++.++ +
T Consensus 279 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~i 353 (385)
T 2bkw_A 279 LHKRWDLHREMSDWFKDSLVNGLQ----LTSVSRYPSNMSAHGLTAVYVADPPDVIAFL-KSHGVVIAGGIHKDIGPKYI 353 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTC----CEESSCSSSTTBCSSCEEEECSCHHHHHHHH-HHTTEECBCCCCTTTGGGEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----ceecccCcccccCCceEEEecCCHHHHHHHH-HHCCeEEeCCCCcccCCCEE
Confidence 6677889999999999999 8765 444432 24667765443 3 445666 5789999874 1
Q ss_pred cEE-Ec----ccCCCCHHHHHHHHHHHhC
Q psy16707 397 RIS-MA----GVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 397 Ris-~a----gl~~~ni~~la~AI~~vv~ 420 (420)
||| ++ ..+.+.++++.++|.++++
T Consensus 354 Ris~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 354 RIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp EECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred EEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 899 65 3699999999999998753
No 146
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=98.22 E-value=6.8e-06 Score=80.16 Aligned_cols=82 Identities=17% Similarity=0.273 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEec--CCCHH-HHHHHHHhCCeEEeCCC--------cEEE
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--GLNAT-QVEKLIKEHSVYLTKDG--------RISM 400 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~~--~l~~~-~v~~Ll~e~~Vy~~p~g--------Ris~ 400 (420)
++.++++++++|+.+.+.|+++| +....+ ..++|.+. +.+.+ .++.|++++||.+.++. |||+
T Consensus 276 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~ 351 (376)
T 3f0h_A 276 ADAEVARIASQAADFRAKIKDLP----FELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGH 351 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSS----EEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEec
Confidence 67788999999999999998876 343332 23455543 44554 45788777899998752 9998
Q ss_pred c-ccCCCCHHHHHHHHHHHh
Q psy16707 401 A-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 401 a-gl~~~ni~~la~AI~~vv 419 (420)
. ..+.++++++.++|.+++
T Consensus 352 ~~~~t~e~i~~~~~~l~~~l 371 (376)
T 3f0h_A 352 IGALTHEDNTTLVNAFKDLQ 371 (376)
T ss_dssp CSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 6 358889999999999875
No 147
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=98.20 E-value=1.7e-05 Score=78.88 Aligned_cols=82 Identities=16% Similarity=0.116 Sum_probs=55.8
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccCC
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~ 237 (420)
+++|++.|. |.+++++.|.+|.. .|. +-..+.+++++++ +|.+ .++.+
T Consensus 29 ~v~~~~~~~-----~~~~~~~~v~~a~~---------~~~---~~~~~~~~~~~~~a~~~g~~----~~~~~-------- 79 (374)
T 2aeu_A 29 ALYDLSGLS-----GGFLIDEKDKALLN---------TYI---GSSYFAEKVNEYGLKHLGGD----ENDKC-------- 79 (374)
T ss_dssp GCEECSSCC-----CCCCCCHHHHHHHT---------STT---HHHHHHHHHHHHHHHHHTCC----TTEEE--------
T ss_pred ceeeecccC-----CCCCCCHHHHHHHH---------Hhc---CchHHHHHHHHHHHHHhCCC----CcceE--------
Confidence 589999987 56788899988764 111 1123334444332 4542 12333
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
+.|.|||.|+.+++..+ | ||+|++++|+|+.|..
T Consensus 80 --------------~~~~ggt~a~~~~~~~~----~-gd~Vl~~~~~y~~~~~ 113 (374)
T 2aeu_A 80 --------------VGFNRTSSAILATILAL----K-PKKVIHYLPELPGHPS 113 (374)
T ss_dssp --------------EEESSHHHHHHHHHHHH----C-CSEEEEECSSSSCCTH
T ss_pred --------------EEEcChHHHHHHHHHhC----C-CCEEEEecCCCCccHH
Confidence 56899999999987643 7 9999999999988765
No 148
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.20 E-value=6.4e-06 Score=81.97 Aligned_cols=111 Identities=14% Similarity=0.214 Sum_probs=89.4
Q ss_pred HhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHH
Q psy16707 10 LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NAT 88 (420)
Q Consensus 10 i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~ 88 (420)
..+..|++++..+...+..+|.+.++.+ |.++++.++++++..|..|.+.|++.+ |..+..+.|+|.+..+ +.+
T Consensus 293 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~~~~~~~~~~~~~ 367 (413)
T 3t18_A 293 SARCNWSNGTHAAQNILIELERAENKKI-YEQELVDLRNMLKSRADVFVTAAKENK----LTMIPYFGGFFTFIPTDKAF 367 (413)
T ss_dssp HHHHHTSSCCHHHHHHHHHTTSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCSSSCEEEECSCHH
T ss_pred hhhccccCCChHHHHHHHHHhcChHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcC----CCccCCCceEEEEeCCCCHH
Confidence 3466788899999999999999998887 999999999999999999999998873 6667788999988754 666
Q ss_pred HHHHHHHhcceEEcCCC---ceecccCCcCCH-HHHHHHHH
Q psy16707 89 QVEKLIKEHSVYLTKDG---RISMAGVTSKNV-GYLAKAIH 125 (420)
Q Consensus 89 qv~~L~~~~~IY~~~~G---Rinvagl~~~ni-~~va~ai~ 125 (420)
++..+-++++|++.+.+ |||++..++.++ +.+.+++.
T Consensus 368 ~~~~~l~~~gv~v~~g~~~iRis~~~~~~~~~l~~l~~~l~ 408 (413)
T 3t18_A 368 DIVKDLEKENIFTIPSAKGIRVAICGVGEEKIPKLVQRLAF 408 (413)
T ss_dssp HHHHHHHHTTEECEECSSEEEECTTTSCGGGHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCCCceEEEEeeCCHHHHHHHHHHHHH
Confidence 66555578899998766 999998888775 33334433
No 149
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=98.18 E-value=7.6e-06 Score=80.93 Aligned_cols=84 Identities=14% Similarity=0.208 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEec-----CCCHHHHHHHHHhCCeEEeC-------C---
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLTK-------D--- 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p-------~--- 395 (420)
++++.+++++.++++.+.+.|++.| |..+.. ..+.|.|+ +.+.+++..+++++||++.| +
T Consensus 285 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~ 360 (420)
T 3gbx_A 285 PEFKVYQQQVAKNAKAMVEVFLNRG----YKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPF 360 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhcC----CeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccC
Confidence 4556777899999999999999877 554443 45566653 34667777777899999987 2
Q ss_pred ----CcEEEccc-----CCCCHHHHHHHHHHHh
Q psy16707 396 ----GRISMAGV-----TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ----gRis~agl-----~~~ni~~la~AI~~vv 419 (420)
-||+++.+ +++.+++++++|++++
T Consensus 361 ~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l 393 (420)
T 3gbx_A 361 VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVL 393 (420)
T ss_dssp TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCcceEEecchhcccCCCHHHHHHHHHHHHHHH
Confidence 28888754 4588999999998875
No 150
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=98.17 E-value=1.3e-05 Score=78.24 Aligned_cols=96 Identities=15% Similarity=0.065 Sum_probs=72.9
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.+|++.|. |...+ |+++...+... ..|.|..|..+|++++++++ |.+ .+
T Consensus 6 ~~~~~l~~~~-------~~~~~-~~~~~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~~---------- 56 (374)
T 3uwc_A 6 VPYSYLERQF-------ADIEP-YLNDLREFIKT---ADFTLGAELEKFEKRFAALH-NAP-------HA---------- 56 (374)
T ss_dssp BCSCCHHHHT-------SSCHH-HHHHHHHHHHH---TCCSSCHHHHHHHHHHHHHT-TCS-------EE----------
T ss_pred ceeeccccCC-------CCchH-HHHHHHHHHHc---CCcccChhHHHHHHHHHHHh-CCC-------cE----------
Confidence 4568888885 44455 77776666543 36888889999999999976 322 12
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.|||.|+.+++..+ .+.| ||+|++++|+|+.+...++..|++
T Consensus 57 ------------~~~~~gt~a~~~~~~~~-~~~~-gd~v~~~~~~~~~~~~~~~~~g~~ 101 (374)
T 3uwc_A 57 ------------IGVGTGTDALAMSFKML-NIGA-GDEVITCANTFIASVGAIVQAGAT 101 (374)
T ss_dssp ------------EEESCHHHHHHHHHHHT-TCCT-TCEEEEESSSCHHHHHHHHHTTCE
T ss_pred ------------EEeCCHHHHHHHHHHHc-CCCC-CCEEEECCCccHHHHHHHHHcCCE
Confidence 56899999998887644 1457 999999999999999999888775
No 151
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.16 E-value=1.1e-05 Score=82.19 Aligned_cols=102 Identities=15% Similarity=0.098 Sum_probs=67.2
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||++.|.|..+-| ...|.|.+|......+ ..+.|.+..|..+.++++++++..... ...++|
T Consensus 50 G~~~lD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v--------- 115 (460)
T 3gju_A 50 GRKSIDAFAGLYCVNVG--YGRQKIADAIATQAKN-LAYYHAYVGHGTEASITLAKMIIDRAP--KGMSRV--------- 115 (460)
T ss_dssp CCEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-HSCCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEE---------
T ss_pred CCEEEECCcchhhccCC--CCCHHHHHHHHHHHHh-ccccccccccCCHHHHHHHHHHHhhCC--CCcCEE---------
Confidence 45679999997766767 3456666665554433 445677777777777777776633211 122344
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcC-----CCCCEEEEcCCCCCC
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFF-----PGEKVIYVPTPTWGN 287 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~-----p~gd~VlvpdP~w~n 287 (420)
+.|.||+.|+..++.++..+. |.++.|++.+|+|..
T Consensus 116 -------------~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg 156 (460)
T 3gju_A 116 -------------YFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHG 156 (460)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCC
T ss_pred -------------EEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCC
Confidence 669999999999887664331 326899999999853
No 152
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=98.16 E-value=6.6e-06 Score=83.71 Aligned_cols=83 Identities=17% Similarity=0.196 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-----CCCCCCcccC-CCCceEEec-----CCCHHHHHHHHHhCCeEEe----CC--
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKE-----GSNKPWNHIT-DQIGMFCYT-----GLNATQVEKLIKEHSVYLT----KD-- 395 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~-----g~~~~w~~i~-~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~----p~-- 395 (420)
+++.+.+++.++++.+.+.|++. | +..+. ...+.|.++ +++.+.+..+++++||.+. |+
T Consensus 299 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~ 374 (447)
T 3h7f_A 299 EFADRQRRTLSGARIIADRLMAPDVAKAG----VSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDP 374 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSHHHHHTT----CEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCC----eEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCC
Confidence 45666788999999999999887 7 44443 234445543 4567888888899999987 32
Q ss_pred --------CcEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707 396 --------GRISMAG-----VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 --------gRis~ag-----l~~~ni~~la~AI~~vv 419 (420)
-||+... ++++.+++++++|.+++
T Consensus 375 ~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l 411 (447)
T 3h7f_A 375 RPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATAL 411 (447)
T ss_dssp ------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 1777654 56789999999998875
No 153
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.15 E-value=3.1e-05 Score=76.26 Aligned_cols=84 Identities=13% Similarity=0.193 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-C-CCHHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCC
Q psy16707 335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-G-LNATQVEKLIKEHSVYLTKDG----RISMA-GVTSKN 407 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-~-l~~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~n 407 (420)
+.++++++++++.+.+.|++++.+. +.....+.+++.|. + ...+.++.| .++||++.|++ ||++. ..+.+.
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~g~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~~~~iRi~~~~~~~~~~ 379 (392)
T 3ruy_A 302 EKLTERSLQLGEKLVGQLKEIDNPM-ITEVRGKGLFIGIELNEPARPYCEQL-KAAGLLCKETHENVIRIAPPLVISEED 379 (392)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCTT-EEEEEEETTEEEEEESSCSHHHHHHH-HTTTEECCCBTTTEEEECCCTTCCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCC-ceEEEeeeeEEEEEEcchHHHHHHHH-HHCCcEEecCCCCEEEEECCCCCCHHH
Confidence 5667899999999999999886431 22233344444443 2 234555666 48999999975 77743 357788
Q ss_pred HHHHHHHHHHHhC
Q psy16707 408 VGYLAKAIHAVTK 420 (420)
Q Consensus 408 i~~la~AI~~vv~ 420 (420)
++++.++|.++++
T Consensus 380 i~~~~~~l~~~l~ 392 (392)
T 3ruy_A 380 LEWAFQKIKAVLS 392 (392)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
No 154
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=98.13 E-value=1.1e-05 Score=82.34 Aligned_cols=104 Identities=12% Similarity=0.029 Sum_probs=68.1
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...+|+..|.+-.+=| ...|.|.+|.....++ ..+.|.+..|..+.++++++++-.... ...++|
T Consensus 49 g~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v--------- 114 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVG--YGRKDFAEAARRQMEE-LPFYNTFFKTTHPAVVELSSLLAEVTP--AGFDRV--------- 114 (459)
T ss_dssp CCEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-CSCCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEE---------
T ss_pred CCEEEECCCchhcccCC--CCCHHHHHHHHHHHHh-ccccccccccCCHHHHHHHHHHHHhCC--CCCCEE---------
Confidence 34578998887656666 3456666666554443 445676667777777777777633211 123344
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcC-----CCCCEEEEcCCCCCCcH
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFF-----PGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~-----p~gd~VlvpdP~w~ny~ 289 (420)
+.|.||+.|+..++.++..+. |.++.|++.+|+|..|.
T Consensus 115 -------------~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~ 157 (459)
T 4a6r_A 115 -------------FYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGST 157 (459)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSS
T ss_pred -------------EEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCcc
Confidence 569999999999887665431 23789999999987443
No 155
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.00014 Score=74.57 Aligned_cols=83 Identities=7% Similarity=0.173 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCCCCccc-CCCCceEEec--CCCHHHHHHHHHhCCeEEeCC-----CcEEEcc
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKE--GSNKPWNHI-TDQIGMFCYT--GLNATQVEKLIKEHSVYLTKD-----GRISMAG 402 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i-~~q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p~-----gRis~ag 402 (420)
.++.+.+++.+.++.+.+.|++. | +..+ .+..++|+|. +.+...+...+.+.||.+.++ .|++++.
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~~~g----~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~~ 417 (497)
T 3mc6_A 342 GYIESCQEIVGAAMKFKKYIQENIPD----LDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFTR 417 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTT----CEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----EEEecCCCeeEEEEeCCCCCHHHHHHHHHhCCEEEecCCCCCeEEEEEeC
Confidence 34566688888899999999984 4 5544 3455666664 445655544446789988653 2999998
Q ss_pred cCCCCHHHHHHHHHHHh
Q psy16707 403 VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 l~~~ni~~la~AI~~vv 419 (420)
.+.+.++.+.+++.+++
T Consensus 418 ~t~e~i~~~~~~L~~~l 434 (497)
T 3mc6_A 418 LSAHVVDEICDILRTTV 434 (497)
T ss_dssp TTTCTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 89999999999998875
No 156
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=98.13 E-value=4.5e-05 Score=74.28 Aligned_cols=104 Identities=18% Similarity=0.243 Sum_probs=66.8
Q ss_pred cCCCchHHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCC-cccC---CCCceEEecCCC--
Q psy16707 306 YSSPPIHGARIVQEILGDPKLKAQWLT--EVKGMADRIISMRQSLKDNLQKEGSNKPW-NHIT---DQIGMFCYTGLN-- 377 (420)
Q Consensus 306 ~s~pp~~ga~iv~~IL~dp~L~~~w~~--el~~m~~r~~~~R~~l~~~L~~~g~~~~w-~~i~---~q~GmF~~~~l~-- 377 (420)
..++|..++..+...| +. ..+ .++.++++++++|+.+.+.|+++|. + .... .+.+.+.++.++
T Consensus 237 ~~t~~~~~~~a~~~al-----~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 307 (362)
T 2c0r_A 237 YNTPPSFGIYMVNEVL-----KW-IEERGGLEGVQQANRKKASLIYDAIDQSGG---FYRGCVDVDSRSDMNITFRLASE 307 (362)
T ss_dssp SSCCCHHHHHHHHHHH-----HH-HHHTTHHHHHHHHHHHHHHHHHHHHHTSTT---SSEESSCGGGBCSSEEEEECSCH
T ss_pred CCCchHHHHHHHHHHH-----HH-HHHhCCHHHHHHHHHHHHHHHHHHHHHcCC---ccccCCChHHcCCcEEEEEcCCc
Confidence 3466767666555433 21 123 4678889999999999999998761 2 2221 123344443332
Q ss_pred --H-HHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 378 --A-TQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 378 --~-~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
. ++++.| ++.||.+.++ + |||++.- +.+.++++.++|++++
T Consensus 308 ~~~~~~~~~L-~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 358 (362)
T 2c0r_A 308 ELEKEFVKAS-EQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFK 358 (362)
T ss_dssp HHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHH-HHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 3 444555 7889988764 2 9998743 5788999999998764
No 157
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=98.09 E-value=2.7e-05 Score=76.95 Aligned_cols=99 Identities=11% Similarity=0.004 Sum_probs=61.7
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...+|++.|.+.++=| ...|.|.+|.....++ ..+.| ..+..+.++++++++....+ .++|
T Consensus 35 g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~~~~~--~~~~~~~~~~l~~~la~~~~----~~~v--------- 96 (395)
T 3nx3_A 35 AKKYLDFSSGIGVCALG--YNHAKFNAKIKAQVDK-LLHTS--NLYYNENIAAAAKNLAKASA----LERV--------- 96 (395)
T ss_dssp CCEEEESSHHHHTCTTC--BSCHHHHHHHHHHHTT-CSCCC--TTSBCHHHHHHHHHHHHHHT----CSEE---------
T ss_pred CCEEEECCCcHHhccCC--CCCHHHHHHHHHHHHh-ccccc--cccCCHHHHHHHHHHHHhcC----CCeE---------
Confidence 34678999887655656 3566777776665543 33333 22334444444444421111 1334
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhc-----CCCCCEEEEcCCCCCCcH
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-----FPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-----~p~gd~VlvpdP~w~ny~ 289 (420)
+.|.|||.|+..+..++... .+ ++.|++++|+|..+.
T Consensus 97 -------------~~~~gg~ea~~~al~~~~~~~~~~g~~-~~~vi~~~~~yhg~~ 138 (395)
T 3nx3_A 97 -------------FFTNSGTESIEGAMKTARKYAFNKGVK-GGQFIAFKHSFHGRT 138 (395)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHHHTTCT-TCEEEEETTCCCCSS
T ss_pred -------------EEeCCHHHHHHHHHHHHHHHhhccCCC-CCEEEEEcCCcCCCC
Confidence 67999999999988765443 35 799999999997665
No 158
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.09 E-value=2.1e-05 Score=78.94 Aligned_cols=101 Identities=10% Similarity=-0.057 Sum_probs=62.5
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
...+|+..|.+-++-| ...|.|.+|.....++ . ..|.+..|..+.++++++++..... ...++|
T Consensus 29 ~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v---------- 92 (430)
T 3i4j_A 29 RRYLDGSSGALVANIG--HGRAEVGERMAAQAAR-L-PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRF---------- 92 (430)
T ss_dssp CEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-C-CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEE----------
T ss_pred CEEEECCCchhccccC--CCCHHHHHHHHHHHHh-c-ccccccccCCHHHHHHHHHHHHhCC--CCCCEE----------
Confidence 4578998886656666 3366666666555433 2 3455566777777777776632211 122344
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhc------CCCCCEEEEcCCCCCCcH
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNF------FPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~------~p~gd~VlvpdP~w~ny~ 289 (420)
+.|.||+.|+..++..+... .+ ++.|++++|+|..|.
T Consensus 93 ------------~~~~gg~ea~~~al~~~~~~~~~~g~~~-~~~vi~~~~~yhg~~ 135 (430)
T 3i4j_A 93 ------------WAVSGGSEATESAVKLARQYHVERGEPG-RFKVITRVPSYHGAS 135 (430)
T ss_dssp ------------EEESSHHHHHHHHHHHHHHHHHHTTCTT-CCEEEEETTC-----
T ss_pred ------------EEeCcHHHHHHHHHHHHHHHHHhcCCCC-CcEEEEEeCCcCCCC
Confidence 66999999999988765433 34 789999999987544
No 159
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.08 E-value=2.4e-05 Score=78.72 Aligned_cols=95 Identities=14% Similarity=-0.017 Sum_probs=65.7
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...+|+.-|.+..+=| ...|.|.+|.....++ ..+.|.|..+..+|++++++++-+ .++|
T Consensus 52 g~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~-------~~~v--------- 112 (429)
T 3k28_A 52 GNEYIDYVLSWGPLIHG--HANDRVVEALKAVAER-GTSFGAPTEIENKLAKLVIERVPS-------IEIV--------- 112 (429)
T ss_dssp CCEEEESCGGGTTCTTC--BSCHHHHHHHHHHHHH-CSCCSSCCHHHHHHHHHHHHHSTT-------CSEE---------
T ss_pred CCEEEECCCChhhcccC--CCCHHHHHHHHHHHhh-CcCcCCCCHHHHHHHHHHHHhCCC-------CCEE---------
Confidence 45678999887766666 3566777666655443 333455677778899998887531 2344
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG 286 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ 286 (420)
+.|.|||.|+..++.++....+ ++.|++++|+|.
T Consensus 113 -------------~~~~~Gsea~~~ai~~a~~~~~-~~~vi~~~~~yh 146 (429)
T 3k28_A 113 -------------RMVNSGTEATMSALRLARGYTG-RNKILKFIGCYH 146 (429)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHT-CCEEEEEETCCC
T ss_pred -------------EEeCChHHHHHHHHHHHHHhhC-CCEEEEECCCcC
Confidence 5699999999998865543334 689999888885
No 160
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.08 E-value=8.1e-06 Score=82.04 Aligned_cols=97 Identities=12% Similarity=-0.008 Sum_probs=64.6
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...+|+..|.|..+=| ...|.|.+|......+ ....+.|.....+|.+++++++-+ .++|
T Consensus 54 g~~ylD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~-------~~~v--------- 114 (434)
T 3l44_A 54 GNKYIDYLAAYGPIITG--HAHPHITKAITTAAEN-GVLYGTPTALEVKFAKMLKEAMPA-------LDKV--------- 114 (434)
T ss_dssp CCEEEECCGGGTTCSSC--BTCHHHHHHHHHHHHH-CSCCSSCCHHHHHHHHHHHHHCTT-------CSEE---------
T ss_pred CCEEEECCCchhccccC--CCCHHHHHHHHHHHHh-CcCCCCCCHHHHHHHHHHHHhCCC-------CCEE---------
Confidence 45678998887666666 3456666666554433 222233555667888888876521 2344
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+.|.|||.|+..++.++....+ ++.|++++|+|..+
T Consensus 115 -------------~~~~sGsea~~~ai~~a~~~~~-~~~vi~~~~~yhg~ 150 (434)
T 3l44_A 115 -------------RFVNSGTEAVMTTIRVARAYTG-RTKIMKFAGCYHGH 150 (434)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCCCS
T ss_pred -------------EEeCchHHHHHHHHHHHHHhhC-CCEEEEEcCccCCC
Confidence 5699999999998875543335 78999999998653
No 161
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=98.07 E-value=1.8e-05 Score=79.69 Aligned_cols=101 Identities=11% Similarity=-0.032 Sum_probs=66.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...+|++.|.|-.+-| ...|.|.+|......+ . ..|.+..|..+.++++++++-....... +++|
T Consensus 42 g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~-~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v--------- 107 (439)
T 3dxv_A 42 GRELIDLSGAWGAASLG--YGHPAIVAAVSAAAAN-P-AGATILSASNAPAVTLAERLLASFPGEG-THKI--------- 107 (439)
T ss_dssp SCEEEESSTTTTTCTTC--BSCHHHHHHHHHHHHS-C-SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEE---------
T ss_pred CCEEEECCCchhhccCC--CCCHHHHHHHHHHHHh-c-cCccccccCCHHHHHHHHHHHHhCCCCC-CCEE---------
Confidence 34678999998765566 2556677666655543 2 4576677888888888887743321111 1233
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN 287 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n 287 (420)
+.|.||+.|+..++..+..+.+ ++.|++.+|+|..
T Consensus 108 -------------~~~~ggsea~~~al~~~~~~~~-~~~vi~~~~~yhg 142 (439)
T 3dxv_A 108 -------------WFGHSGSDANEAAYRAIVKATG-RSGVIAFAGAYHG 142 (439)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHS-CCEEEEETTCCCC
T ss_pred -------------EEeCCHHHHHHHHHHHHHHHhC-CCEEEEECCCCCC
Confidence 6799999999998875432335 6889998998843
No 162
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=98.05 E-value=1.5e-05 Score=78.84 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCCC----cEEEc-c
Q psy16707 335 KGMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKDG----RISMA-G 402 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~g----Ris~a-g 402 (420)
+.++++++++|+.+.+.|++. +.+. +. ..+..|.|+++.+ +. +.++.|+ ++||++.|++ ||++. .
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~-~~~~~g~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~iRis~~~~ 377 (397)
T 2ord_A 301 EGFLEEVEEKGNYLMKKLQEMKEEYDV-VA-DVRGMGLMIGIQFREEVSNREVATKCF-ENKLLVVPAGNNTIRFLPPLT 377 (397)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTT-EE-EEEEETTEEEEEECTTSCHHHHHHHHH-HTTEECEEETTTEEEECCCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCc-eE-EEEEEeEEEEEEECChHHHHHHHHHHH-HCCCEEccCCCCEEEEECCcC
Confidence 356688889999999999876 3321 11 1234566666432 23 4456665 5899999864 78854 4
Q ss_pred cCCCCHHHHHHHHHHHh
Q psy16707 403 VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 l~~~ni~~la~AI~~vv 419 (420)
.+.++++++.++|.+++
T Consensus 378 ~~~e~i~~~~~~l~~~l 394 (397)
T 2ord_A 378 VEYGEIDLAVETLKKVL 394 (397)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 68889999999998875
No 163
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=98.04 E-value=2.9e-05 Score=74.76 Aligned_cols=78 Identities=15% Similarity=0.187 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC----C--cEEEcc-cCCCCH
Q psy16707 337 MADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD----G--RISMAG-VTSKNV 408 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~----g--Ris~ag-l~~~ni 408 (420)
+.++++++++.+.+.|+++ | +....++.+.|.|..++.+.+++| .++||.+.|+ + ||++.. .+.+.+
T Consensus 265 ~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i 339 (356)
T 1v72_A 265 NARKANAAAQRLAQGLEGLGG----VEVLGGTEANILFCRLDSAMIDAL-LKAGFGFYHDRWGPNVVRFVTSFATTAEDV 339 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTCTT----EEEESCCCSSEEEEEECHHHHHHH-HHTTCBCBCSSSSTTEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC----cEEccCCCccEEEEEcCHHHHHHH-HhcCeEEeccccCCCeEEEEecCCCCHHHH
Confidence 4567788888999999874 4 555556778888887777777777 5779999864 2 888653 467899
Q ss_pred HHHHHHHHHHh
Q psy16707 409 GYLAKAIHAVT 419 (420)
Q Consensus 409 ~~la~AI~~vv 419 (420)
+++.++|.+++
T Consensus 340 ~~~~~~l~~~l 350 (356)
T 1v72_A 340 DHLLNQVRLAA 350 (356)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 164
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=98.03 E-value=4.8e-05 Score=77.29 Aligned_cols=86 Identities=13% Similarity=0.123 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC-------CCCcccCCC----CceEEec--CCCH-HHHHHHHHhCCeEEeCC--C-
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSN-------KPWNHITDQ----IGMFCYT--GLNA-TQVEKLIKEHSVYLTKD--G- 396 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~-------~~w~~i~~q----~GmF~~~--~l~~-~~v~~Ll~e~~Vy~~p~--g- 396 (420)
++.+++++.+.++.+.+.|++.-.+ ..+..+.++ .|.|.++ +.+. +..+.| .+.||.+... +
T Consensus 354 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~~~ 432 (465)
T 3e9k_A 354 MKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVPNKDVFQEL-EKRGVVCDKRNPNG 432 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCTTCCHHHHH-HTTTEECEEETTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCCHHHHHHHH-HHCCEEEecCCCCE
Confidence 6788899999999999999883100 015555544 3666654 3233 444566 5779998643 2
Q ss_pred -cEEE--cccCCCCHHHHHHHHHHHhC
Q psy16707 397 -RISM--AGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 397 -Ris~--agl~~~ni~~la~AI~~vv~ 420 (420)
|||+ ...+.++|+.+.++|.++++
T Consensus 433 iRis~~~~~~t~edi~~~~~~l~~~l~ 459 (465)
T 3e9k_A 433 IRVAPVPLYNSFHDVYKFTNLLTSILD 459 (465)
T ss_dssp EEEBCCTTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEeCcccCCCHHHHHHHHHHHHHHHH
Confidence 9987 45588899999999998763
No 165
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.02 E-value=1.8e-05 Score=79.25 Aligned_cols=96 Identities=11% Similarity=0.020 Sum_probs=58.4
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||++.|.+-.+-| ...|.|.+|.....++ ..+ |.. ..+.+.++++++..... .+++|
T Consensus 51 g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~~~-~~~---~~~~~~~la~~l~~~~~---~~~~v--------- 111 (427)
T 3fq8_A 51 GNRYIDYVGTWGPAICG--HAHPEVIEALKVAMEK-GTS-FGA---PCALENVLAEMVNDAVP---SIEMV--------- 111 (427)
T ss_dssp SCEEEESSGGGTTCTTC--BTCHHHHHHHHHHHTT-CSC-CSS---CCHHHHHHHHHHHHHST---TCSEE---------
T ss_pred CCEEEECCCchhhhccC--CCCHHHHHHHHHHHHh-CCC-cCC---CCHHHHHHHHHHHHhCC---CCCEE---------
Confidence 45678999998766767 3567777776665543 222 322 33444444444422111 13444
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN 287 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n 287 (420)
+.+.|||.|+..++.+...+.. ++.|++++|+|..
T Consensus 112 -------------~~~~ggsea~~~al~~a~~~~~-~~~vi~~~~~yhg 146 (427)
T 3fq8_A 112 -------------RFVNSGTEACMAVLRIMRAYTG-RDKIIKFEGCYHG 146 (427)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEEETCCCC
T ss_pred -------------EEeCCHHHHHHHHHHHHHHhhC-CCEEEEECCCcCC
Confidence 5699999999988854332323 5889999998864
No 166
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=98.00 E-value=2.2e-05 Score=78.66 Aligned_cols=113 Identities=18% Similarity=0.249 Sum_probs=89.3
Q ss_pred hhccCCCccchHHHHHHHHhC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---C
Q psy16707 11 IRAFYSSPPIHGARIVQEILG-DPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---N 86 (420)
Q Consensus 11 ~R~~yS~PP~hGa~iv~~IL~-~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~ 86 (420)
.|..+.++|..+..++...|. +. .|.++++.++++++..|+.|.+.|++...+..|..+..+.|||.+..+ +
T Consensus 304 ~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 379 (430)
T 2x5f_A 304 IRSNISSGPLPTQSAVKHVLKNNK----QFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVHDVD 379 (430)
T ss_dssp HHTTTSSCCHHHHHHHHHHHHSCH----HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEESSSC
T ss_pred hhcccCCCChHHHHHHHHHHccCh----HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCCCCC
Confidence 344677888899999999998 74 799999999999999999999999843211237777778899876644 4
Q ss_pred HHH-HHHHHHhcceEEcC--CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 87 ATQ-VEKLIKEHSVYLTK--DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 87 ~~q-v~~L~~~~~IY~~~--~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.++ ++.|.++++|++.+ .| ||+++..+..+++.++++|.++
T Consensus 380 ~~~~~~~l~~~~gi~v~~g~~~~iRis~~~~~~e~i~~~~~~l~~~ 425 (430)
T 2x5f_A 380 PEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIPHVFDSIAKA 425 (430)
T ss_dssp HHHHHHHHHHHHCEECEECSSSEEEEEGGGSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEecCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 544 56787779999976 34 9999988889999999998875
No 167
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=97.98 E-value=2.9e-05 Score=80.62 Aligned_cols=117 Identities=13% Similarity=0.218 Sum_probs=93.6
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccee
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFC 81 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~----~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs 81 (420)
+|..+ +..+++||..+..++...|++| ....+|.++++.++++++..|..|.+.|++. +| |.....|.|||.
T Consensus 341 ~l~~~-~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--~g-~~~~~p~gg~~~ 416 (498)
T 3ihj_A 341 QLVKL-LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQV--PG-IHCNPLQGAMYA 416 (498)
T ss_dssp HHHHH-HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--TT-EECCCCCBSSEE
T ss_pred HHHHH-HhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-cEecCCCeEEEE
Confidence 34444 3478899999999999999975 3678899999999999999999999999875 33 777788999999
Q ss_pred ec---------------CCCHHH--HHHHHHhcceEEcC-------CC----ceecccCCcCCHHHHHHHHHhh
Q psy16707 82 YT---------------GLNATQ--VEKLIKEHSVYLTK-------DG----RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 82 ~~---------------gL~~~q--v~~L~~~~~IY~~~-------~G----Rinvagl~~~ni~~va~ai~~v 127 (420)
+. |+++++ +..|-++++|++.+ .| ||+++ .+...++..+++|.++
T Consensus 417 ~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~ 489 (498)
T 3ihj_A 417 FPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDF 489 (498)
T ss_dssp CCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred EEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHH
Confidence 95 556666 57777889999865 33 88984 7778888888887765
No 168
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=97.96 E-value=0.00022 Score=72.37 Aligned_cols=81 Identities=12% Similarity=0.121 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCCC----cEEEc-cc
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKDG----RISMA-GV 403 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~g----Ris~a-gl 403 (420)
.+.++++++++.+.+.|++++.+ +....+..|.|.++-+ +. +.++.|+ ++||++.|.+ ||++. ..
T Consensus 344 ~~~~~~~~~~~~l~~~L~~l~~~--~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~-~~Gv~v~~~~~~~iRi~~~~~~ 420 (439)
T 2oat_A 344 NLAENADKLGIILRNELMKLPSD--VVTAVRGKGLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPTHGDIIRFAPPLVI 420 (439)
T ss_dssp THHHHHHHHHHHHHHHHTTSCTT--TEEEEEEETTEEEEEECCCSSCCHHHHHHHHH-HTTEECCBSSSSEEEECCCTTC
T ss_pred hHHHHHHHHHHHHHHHHHHhcCC--CcEEEEeeeeEEEEEEecCccHHHHHHHHHHH-HCCeEEecCCCCEEEEECccCC
Confidence 45688899999999999887632 1111335677776422 23 3456665 6799999853 78665 36
Q ss_pred CCCCHHHHHHHHHHHh
Q psy16707 404 TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 404 ~~~ni~~la~AI~~vv 419 (420)
++++++++.++|.+++
T Consensus 421 t~e~i~~~l~~l~~~l 436 (439)
T 2oat_A 421 KEDELRESIEIINKTI 436 (439)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8899999999998875
No 169
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=97.96 E-value=0.00077 Score=69.07 Aligned_cols=82 Identities=16% Similarity=0.161 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE--Eec----CCCHHH-HHHHHHhCCeEEe----C---CC-
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF--CYT----GLNATQ-VEKLIKEHSVYLT----K---DG- 396 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF--~~~----~l~~~~-v~~Ll~e~~Vy~~----p---~g- 396 (420)
+.++++.+++.++++.+.+.|++.| +.... +.+.| +++ +.+.+. +++|+ ++||++. | .+
T Consensus 340 ~~l~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~-~~Gi~~~~~~~~~~~~~~ 413 (474)
T 1wyu_B 340 EGLKKAAALAVLNARYLKELLKEKG----YRVPY-DGPSMHEFVAQPPEGFRALDLAKGLL-ELGFHPPTVYFPLIVKEA 413 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CBCSS-CSSCCSCEEEBCSTTCCHHHHHHHHH-HTTCCCCEESCSTTSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC----cEecC-CCCcceEEEEEcCCCCCHHHHHHHHH-HCCccccccccccccCCE
Confidence 4566777899999999999999876 43322 22233 232 345544 46665 5699753 1 12
Q ss_pred -cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 397 -RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 -Ris~agl-~~~ni~~la~AI~~vv 419 (420)
||+++.. +.+.+++++++|.+++
T Consensus 414 lRis~~~~~t~e~id~~~~~L~~~~ 438 (474)
T 1wyu_B 414 LMVEPTETEAKETLEAFAEAMGALL 438 (474)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCHHHHHHHHHHHHHHH
Confidence 9998743 5678999999998875
No 170
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=97.95 E-value=5.8e-05 Score=75.98 Aligned_cols=81 Identities=17% Similarity=0.173 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCCC----cEEEc-
Q psy16707 336 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKDG----RISMA- 401 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~g----Ris~a- 401 (420)
.+.++++++++.+.+.|+++ +.+. ...+ +..|.|+++.+ +. +.++.|+ ++||++.|++ ||++.
T Consensus 321 ~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~-~~~g~~~~v~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~~~iRl~~~~ 397 (420)
T 2pb2_A 321 EVLQGIHTKRQQFVQHLQAIDEQFDI-FSDI-RGMGLLIGAELKPKYKGRARDFLYAGA-EAGVMVLNAGADVMRFAPSL 397 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC-EEEE-EEETTEEEEEECGGGTTCHHHHHHHHH-HTTEECEESSTTEEEECCCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCC-eEEE-EecceEEEEEECCCchHHHHHHHHHHH-HCCCEEEeCCCCEEEEECCC
Confidence 45577888888888888775 3221 1112 34566765432 23 3446665 5899999864 78754
Q ss_pred ccCCCCHHHHHHHHHHHh
Q psy16707 402 GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 402 gl~~~ni~~la~AI~~vv 419 (420)
..+.+.++++.++|.+++
T Consensus 398 ~~t~eei~~~~~~l~~~l 415 (420)
T 2pb2_A 398 VVEEADIHEGMQRFAQAV 415 (420)
T ss_dssp TCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 478899999999988765
No 171
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=97.94 E-value=6e-05 Score=76.89 Aligned_cols=100 Identities=13% Similarity=0.007 Sum_probs=61.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||+..|.+-.+=| ...|.|.+|.....++ . ..|.+..|..+.+.++++++...... -..++|
T Consensus 63 G~~ylD~~~~~~~~~lG--h~~p~v~~A~~~~~~~-~-~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v--------- 128 (453)
T 4ffc_A 63 GNSFIDLGAGIAVTTVG--ASHPAVAAAIADQATH-F-THTCFMVTPYEQYVQVAELLNALTPG-DHDKRT--------- 128 (453)
T ss_dssp SCEEEESSHHHHTCTTC--TTCHHHHHHHHHHHHH-C-SCCTTTTSCCHHHHHHHHHHHHHSSC-SSCEEE---------
T ss_pred CCEEEEcCCCcccCcCC--CCCHHHHHHHHHHHHh-c-cccccCcCCCHHHHHHHHHHHHhCCC-CCCcEE---------
Confidence 45679999886656666 3356666665554433 2 34666666666666666665221100 012334
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG 286 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ 286 (420)
+.|.|||.|+..++.+...... ++.|++.+|+|.
T Consensus 129 -------------~~~~sGseA~~~alk~a~~~~g-~~~ii~~~~~yh 162 (453)
T 4ffc_A 129 -------------ALFNSGAEAVENAIKVARLATG-RPAVVAFDNAYH 162 (453)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCC
T ss_pred -------------EEeCcHHHHHHHHHHHHHHhcC-CCEEEEEcCccC
Confidence 6699999999998865433223 588998888886
No 172
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=97.94 E-value=0.00011 Score=72.08 Aligned_cols=87 Identities=15% Similarity=0.171 Sum_probs=67.4
Q ss_pred CCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeeccc
Q psy16707 177 PYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGIS 256 (420)
Q Consensus 177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~g 256 (420)
++..+.|+++....... ..|.+..+..+|++++++++ |.+ .+ +.+.|
T Consensus 12 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~~----------------------~~~~s 58 (367)
T 3nyt_A 12 ARIKDKIDAGIQRVLRH---GQYILGPEVTELEDRLADFV-GAK-------YC----------------------ISCAN 58 (367)
T ss_dssp HHHHHHHHHHHHHHHHH---CCCSSCHHHHHHHHHHHHHH-TCS-------EE----------------------EEESC
T ss_pred cccCHHHHHHHHHHHhc---CCccCChHHHHHHHHHHHHh-CCC-------cE----------------------EEeCC
Confidence 35667777777766543 35677788999999999976 322 22 67899
Q ss_pred chHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 257 GTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 257 Gtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
||.|+.+++..+ .+.| ||.|++++|+|+.+...++..|++
T Consensus 59 Gt~al~~al~~~-~~~~-gd~Vi~~~~~~~~~~~~~~~~G~~ 98 (367)
T 3nyt_A 59 GTDALQIVQMAL-GVGP-GDEVITPGFTYVATAETVALLGAK 98 (367)
T ss_dssp HHHHHHHHHHHT-TCCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHh-CCCC-cCEEEECCCccHHHHHHHHHcCCE
Confidence 999999988644 2457 999999999999999999888875
No 173
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=97.92 E-value=3e-05 Score=78.11 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=90.1
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
++....+..|+++|..+...+...|.+.. .++++.++++++..|+.|.+.|++.+ |..+..+.|+|.+..+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 381 (449)
T 3qgu_A 311 DWNRVMTTCFNGASNIVQAGGLACLQPEG-----LKEMNAMIKFYKENAQILKTTFTEMG----FSVYGGDDAPYIWVGF 381 (449)
T ss_dssp HHHHHHHHSCCCCCHHHHHHHHHHTSHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTT----CCEEESSSSSEEEEEC
T ss_pred HHHHHhhcccCCCCHHHHHHHHHHHhhcC-----HHHHHHHHHHHHHHHHHHHHHHHHCC----CeeeCCCCeeEEEEEC
Confidence 55566677888999999999999988633 25678889999999999999998863 6777778899998876
Q ss_pred C----HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 N----ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~----~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
. .+.++.|.++++|++.+. | ||++++ +..+|+..+++|.++
T Consensus 382 ~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~ 436 (449)
T 3qgu_A 382 PGKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEA 436 (449)
T ss_dssp TTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 3 455678989999998742 3 677665 889999999999887
No 174
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=97.89 E-value=6e-05 Score=75.00 Aligned_cols=111 Identities=13% Similarity=0.060 Sum_probs=70.0
Q ss_pred HHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707 154 FKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISI 231 (420)
Q Consensus 154 ~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~ 231 (420)
......++..++++|. .|-...+++.+.+.++.....+....+.|. +..+..++++.+++++ |.+ .+
T Consensus 14 ~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~-------~~-- 82 (398)
T 2rfv_A 14 VHAGQQPDPSTGALST-PIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLE-RGE-------AG-- 82 (398)
T ss_dssp HHTTCCCCTTTCCSSC-CCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHH-TCS-------EE--
T ss_pred eecCCcCccCCCCcCC-CCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHh-CCC-------cE--
Confidence 3333334445788884 233344556666766655221222345555 4556678888888876 421 11
Q ss_pred ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
+.+.+|+.|+.+++..+ +.| ||.|++++|+|+.+...+ +..|.+
T Consensus 83 --------------------i~~~sG~~a~~~~l~~~--~~~-gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 130 (398)
T 2rfv_A 83 --------------------LATASGISAITTTLLTL--CQQ-GDHIVSASAIYGCTHAFLSHSMPKFGIN 130 (398)
T ss_dssp --------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESSSCHHHHHHHHTHHHHTTCE
T ss_pred --------------------EEECCHHHHHHHHHHHH--hCC-CCEEEEcCCCcccHHHHHHHHHHHcCCE
Confidence 55778999999888655 457 899999999999988776 666664
No 175
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=97.86 E-value=0.00023 Score=72.02 Aligned_cols=96 Identities=15% Similarity=0.004 Sum_probs=59.2
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
...||++.|.+-++-| ...|.|.+|......+ . ..| .+..++++++++++.... + ..++|
T Consensus 57 ~~~iD~~~~~~~~~lg--~~~~~v~~a~~~~~~~-~-~~~---~~~~~~~~~la~~l~~~~-~--~~~~v---------- 116 (453)
T 2cy8_A 57 NVYLDFFGGHGALVLG--HGHPRVNAAIAEALSH-G-VQY---AASHPLEVRWAERIVAAF-P--SIRKL---------- 116 (453)
T ss_dssp CEEEESCTTTTSCTTC--BTCHHHHHHHHHHHTT-T-CSS---CSSCHHHHHHHHHHHHHC-T--TCSEE----------
T ss_pred CEEEECcccHhhcccC--CCCHHHHHHHHHHHHh-C-CCC---CCCCHHHHHHHHHHHhhC-C--CCCEE----------
Confidence 4568999997544555 2566677776665543 2 223 357789999999883322 1 13444
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny 288 (420)
+.|.||+.|+..++.....+.+ ++.|++++|+|..+
T Consensus 117 ------------~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~ 152 (453)
T 2cy8_A 117 ------------RFTGSGTETTLLALRVARAFTG-RRMILRFEGHYHGW 152 (453)
T ss_dssp ------------EEESCHHHHHHHHHHHHHHHHC-CCEEEEECC-----
T ss_pred ------------EEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCC
Confidence 5699999999988775211224 57888999999743
No 176
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=97.82 E-value=1.1e-05 Score=84.56 Aligned_cols=100 Identities=15% Similarity=0.216 Sum_probs=79.7
Q ss_pred HHHHHHHhCChhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH----------
Q psy16707 23 ARIVQEILGDPKLK-----AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA---------- 87 (420)
Q Consensus 23 a~iv~~IL~~~~L~-----~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~---------- 87 (420)
+.++..++....|. ..|.+.++.|+++++..|..|.+.|. . .|.+...+.|||.+.+++.
T Consensus 387 ~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~----~~~~~~~~~g~~~~~~l~~~~~~~~g~~~ 461 (533)
T 3f6t_A 387 QQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A----PKDETDTNTHYYSLIDIYRLAEKIYGKEF 461 (533)
T ss_dssp HHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C----CCCCSTTBCCSEEEEEHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C----CccccCCCceEEEEEehHhhhhhccchHH
Confidence 44444444444554 45778899999999999999999995 2 2777788999999987753
Q ss_pred -----------HHHHHHHHhcceEEcC-------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 88 -----------TQVEKLIKEHSVYLTK-------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 -----------~qv~~L~~~~~IY~~~-------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.+.+|.++++||+.+ .| ||+++++++.+++.++++|.++
T Consensus 462 ~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~ 521 (533)
T 3f6t_A 462 RDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLEL 521 (533)
T ss_dssp HHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHH
T ss_pred HHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHH
Confidence 6677888899999986 45 9999999999999999999876
No 177
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=97.81 E-value=9.5e-05 Score=74.92 Aligned_cols=101 Identities=9% Similarity=-0.027 Sum_probs=61.8
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||+..|.+...-| ...|.|.+|......+ . ..|.+..|..+.+.++++++..... ...++|
T Consensus 43 g~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v--------- 107 (448)
T 3dod_A 43 GKEYYDGFSSVWLNVHG--HRKKELDDAIKKQLGK-I-AHSTLLGMTNVPATQLAETLIDISP--KKLTRV--------- 107 (448)
T ss_dssp SCEEEETTHHHHTCSSC--BSCHHHHHHHHHHHTT-C-SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEE---------
T ss_pred CCEEEECCcchhhccCC--CCCHHHHHHHHHHHHh-c-cCccccccCCHHHHHHHHHHHHhCC--CCCCEE---------
Confidence 34578998887666666 3456777776665543 3 3355566777777777777633221 112344
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhc--CCC---CCEEEEcCCCCCC
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF--FPG---EKVIYVPTPTWGN 287 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--~p~---gd~VlvpdP~w~n 287 (420)
+.|.|||.|+..++.++... .++ +|.|++++|+|..
T Consensus 108 -------------~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg 148 (448)
T 3dod_A 108 -------------FYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHG 148 (448)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----
T ss_pred -------------EEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCC
Confidence 66999999999988765432 031 4999999999953
No 178
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=97.79 E-value=2.5e-05 Score=76.92 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=86.0
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
..++...+....++|..+..++...|.+.+ .| ++.+++|++.+|+.|.+.|++. ..|..+..+.|+|.+..
T Consensus 273 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~ 343 (407)
T 3nra_A 273 ARMEKLQAIVSLRAAGYSQAVLRGWFDEAP---GW---MEDRIARHQAIRDELLHVLRGC---EGVFARTPQAGSYLFPR 343 (407)
T ss_dssp HHHHHHHHHHTSSSCHHHHGGGGGTTCCCT---TH---HHHHHHHHHHHHHHHHHHHHTS---TTCBCCCCSBSSEECCB
T ss_pred HHHHHHHhhhccCCChHHHHHHHHHHhccc---hH---HHHHHHHHHHHHHHHHHHHhcC---CCceeccCCeeEEEEEe
Confidence 455666666667777788888888887532 23 5567788899999999999875 23677777888999886
Q ss_pred CCH------HHHHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LNA------TQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~------~qv~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v 127 (420)
+.. +.++.|+++++|++.+.+ ||+++. +..+|+..+++|.++
T Consensus 344 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~ 401 (407)
T 3nra_A 344 LPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTL 401 (407)
T ss_dssp CCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHH
Confidence 654 556778888999987532 899986 889999999988775
No 179
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=97.78 E-value=0.00026 Score=72.05 Aligned_cols=100 Identities=11% Similarity=0.021 Sum_probs=63.5
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||+..|.+-.+-| ...|.|.+|.....++ . ..|.+..|..+.+.++++++..... .-..++|
T Consensus 60 g~~ylD~~~~~~~~~lG--h~~p~v~~A~~~~~~~-~-~~~~~~~~~~~~~~~la~~l~~~~~-~~~~~~v--------- 125 (451)
T 3oks_A 60 GNRLIDLGSGIAVTTVG--NSAPKVVEAVRSQVGD-F-THTCFMVTPYEGYVAVCEQLNRLTP-VRGDKRS--------- 125 (451)
T ss_dssp SCEEEESSHHHHTCTTC--TTCHHHHHHHHHHHTT-C-SCCTTTTSCCHHHHHHHHHHHHHSS-CCSSEEE---------
T ss_pred CCEEEEcCCCccccccC--CCCHHHHHHHHHHHHh-c-ccccCCccCCHHHHHHHHHHHHhCC-cCCCCEE---------
Confidence 34578999886655666 3456666666655543 3 3476666777777777776632210 0012334
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG 286 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ 286 (420)
+.|.|||.|+..++.+...+.. .+.|++.+|+|.
T Consensus 126 -------------~~~~sGseA~~~Alk~a~~~~g-~~~ii~~~~~yh 159 (451)
T 3oks_A 126 -------------ALFNSGSEAVENAVKIARSHTH-KPAVVAFDHAYH 159 (451)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCC
T ss_pred -------------EEeCcHHHHHHHHHHHHHHhcC-CCeEEEEcCCcC
Confidence 5699999999998865543323 588999888886
No 180
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=97.76 E-value=0.00018 Score=72.78 Aligned_cols=81 Identities=16% Similarity=0.220 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC--C--cEEEc-c
Q psy16707 336 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD--G--RISMA-G 402 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~--g--Ris~a-g 402 (420)
.+.++++++++.+.+.|+++ +.+. ....+..|.|.++.+ +. +.++.|+ +.||++.|+ + ||+++ .
T Consensus 333 ~~~~~~~~~~~~l~~~L~~l~~~~~~--~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~iRi~~~~~ 409 (433)
T 1z7d_A 333 KLCENAEKLGGPFLENLKRELKDSKI--VRDVRGKGLLCAIEFKNELVNVLDICLKLK-ENGLITRDVHDKTIRLTPPLC 409 (433)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEETTEEEEEECTTTCCHHHHHHHHH-HTTEECCEETTTEEEECCCTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEeeeeEEEEEEccChhHHHHHHHHHH-HCCeEEecCCCCEEEEECCcC
Confidence 45577888888888888876 5331 112234577776422 23 3456665 679999884 2 78765 3
Q ss_pred cCCCCHHHHHHHHHHHh
Q psy16707 403 VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 403 l~~~ni~~la~AI~~vv 419 (420)
.++++++++.++|.+++
T Consensus 410 ~t~e~i~~~l~~l~~~l 426 (433)
T 1z7d_A 410 ITKEQLDECTEIIVKTV 426 (433)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 68899999999998764
No 181
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=97.72 E-value=0.00029 Score=71.02 Aligned_cols=81 Identities=11% Similarity=0.130 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CCCCCcccCCCCceEEecCCC-----H-----HHHHHHHHhCCeEEeCCC---cEEEc
Q psy16707 336 GMADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTGLN-----A-----TQVEKLIKEHSVYLTKDG---RISMA 401 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g-~~~~w~~i~~q~GmF~~~~l~-----~-----~~v~~Ll~e~~Vy~~p~g---Ris~a 401 (420)
.+.++++++++.+.+.|++++ .+ .....+..|+|.|+.+. . +.++.|+ +.||++.|+| ||++.
T Consensus 349 ~~~~~~~~~~~~l~~~L~~l~~~~--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~iRis~~ 425 (449)
T 3a8u_X 349 NLVQSVAEVAPHFEKALHGIKGAK--NVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFGGDTLQFGPT 425 (449)
T ss_dssp THHHHHHHHHHHHHHHHHTTTTST--TEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEETTEEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCC--CeEEEeeeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecCCCEEEEECC
Confidence 456788888899999998754 22 11112356777775331 1 4556775 5699999864 78754
Q ss_pred -ccCCCCHHHHHHHHHHHh
Q psy16707 402 -GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 402 -gl~~~ni~~la~AI~~vv 419 (420)
..+.++++++.++|.+++
T Consensus 426 ~~~t~~~i~~~l~~l~~~l 444 (449)
T 3a8u_X 426 FNSKPQDLDRLFDAVGEVL 444 (449)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHH
Confidence 578899999999998875
No 182
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=97.72 E-value=0.00046 Score=71.03 Aligned_cols=103 Identities=16% Similarity=0.022 Sum_probs=67.0
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||+..|.|-.+=| ...|.|.+|.....++ ..+.|. ..|..+.+.++++++..... ...++|
T Consensus 53 G~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~l~~-~~~~~~-~~~~~~~~~~la~~l~~~~~--~~~~~v--------- 117 (476)
T 3i5t_A 53 GRRLIDGPAGMWCAQVG--YGRREIVDAMAHQAMV-LPYASP-WYMATSPAARLAEKIATLTP--GDLNRI--------- 117 (476)
T ss_dssp CCEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-CCCCCT-TTCBCHHHHHHHHHHHTTSS--TTCCEE---------
T ss_pred CCEEEECCCchhhccCC--CCCHHHHHHHHHHHHh-ccCccc-CccCCHHHHHHHHHHHhcCC--CCcCEE---------
Confidence 45578988887666666 3456666666555443 333333 36778888888888855431 112344
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhc-----CCCCCEEEEcCCCCCCcH
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-----FPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-----~p~gd~VlvpdP~w~ny~ 289 (420)
+.+.||+.|+..++.++... .+.++.|++.+|+|..+.
T Consensus 118 -------------~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~ 160 (476)
T 3i5t_A 118 -------------FFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGST 160 (476)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSS
T ss_pred -------------EEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCC
Confidence 56999999999988766443 032678999999886443
No 183
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=97.69 E-value=0.00019 Score=73.92 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=64.5
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||+.-|.|-.+-| ...|.|.+|.....++ ..+.|.+..+..+.+.++++.+..... ...++|
T Consensus 54 G~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~~~~-~~~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v--------- 119 (472)
T 3hmu_A 54 GEEILDAMAGLWCVNIG--YGRDELAEVAARQMRE-LPYYNTFFKTTHVPAIALAQKLAELAP--GDLNHV--------- 119 (472)
T ss_dssp CCEEECTTHHHHTCTTC--BCCHHHHHHHHHHHHH-CSCCCSSSSEECHHHHHHHHHHHHHSC--TTEEEE---------
T ss_pred CCEEEECCCchhhccCC--CCCHHHHHHHHHHHHh-ccccccccccCCHHHHHHHHHHHHhCC--CCCCEE---------
Confidence 45678998887666667 3456666666554433 445566655665666666655522210 112344
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcC-----CCCCEEEEcCCCCCCc
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFF-----PGEKVIYVPTPTWGNH 288 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~-----p~gd~VlvpdP~w~ny 288 (420)
+.+.||+.|+..++.++..+. |.++.|++.+|+|..|
T Consensus 120 -------------~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~ 161 (472)
T 3hmu_A 120 -------------FFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGS 161 (472)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCS
T ss_pred -------------EEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCc
Confidence 569999999999887665431 2268899999888644
No 184
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=97.64 E-value=0.00056 Score=68.53 Aligned_cols=98 Identities=14% Similarity=0.052 Sum_probs=59.5
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...+|+.-|.+-++-| ...|.|.+|.....++.....| |.....++.+.+++++-+ .++|
T Consensus 52 g~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~~-------~~~v--------- 112 (429)
T 4e77_A 52 GKAYIDYVGSWGPMILG--HNHPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLVPT-------MDMV--------- 112 (429)
T ss_dssp CCEEEESSGGGTTCTTC--BTCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHSTT-------CSEE---------
T ss_pred CCEEEECCCchhccccC--CCCHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhCCC-------CCEE---------
Confidence 45678998887666666 3466677776665543222233 444455666666665421 2344
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI 289 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~ 289 (420)
+.|.|||.|+..++.+...+.+ ++.|++.+|+|..+.
T Consensus 113 -------------~~~~sGsea~~~al~~a~~~~~-~~~ii~~~~~yhg~~ 149 (429)
T 4e77_A 113 -------------RMVNSGTEATMSAIRLARGYTG-RDKIIKFEGCYHGHA 149 (429)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCCC--
T ss_pred -------------EEeCcHHHHHHHHHHHHHHhhC-CCEEEEEcCccCCCC
Confidence 5699999999988764433334 578888877775443
No 185
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=97.64 E-value=0.00049 Score=68.83 Aligned_cols=80 Identities=13% Similarity=0.220 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhc----CCCCCCcccCCCCceEEecCCC-----------------H-HHHHHHHHhCCeEE
Q psy16707 335 KGMADRIISMRQSLKDNLQKE----GSNKPWNHITDQIGMFCYTGLN-----------------A-TQVEKLIKEHSVYL 392 (420)
Q Consensus 335 ~~m~~r~~~~R~~l~~~L~~~----g~~~~w~~i~~q~GmF~~~~l~-----------------~-~~v~~Ll~e~~Vy~ 392 (420)
+.+.++++++++.+.+.|+++ + +....+..|.|.|+.+. . +.++.|+ ++||++
T Consensus 320 ~~~~~~~~~~~~~l~~~L~~~~~~~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v 394 (424)
T 2e7u_A 320 PGYYAYLEDLGARLEAGLKEVLKEKG----LPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYW 394 (424)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTT----CCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEE
Confidence 345677777788888777764 4 32223456777765332 1 3445665 799999
Q ss_pred eCCC--cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 393 TKDG--RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 393 ~p~g--Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
.|++ |+.++ ..+++.++.+.++|.+++
T Consensus 395 ~~~~~~~~~~~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 395 PPSNFEAAFLSVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp CSSSSSCEECCTTCCHHHHHHHHHHHHHHC
T ss_pred eccCCCceEeeccCCHHHHHHHHHHHHHhC
Confidence 9976 43332 367888999999988764
No 186
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=97.64 E-value=0.00019 Score=71.44 Aligned_cols=121 Identities=17% Similarity=0.116 Sum_probs=86.4
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGD--PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~--~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~ 82 (420)
..++...+....+++..+..++...|.+ ..+.+.+.+..+.+++|...+++.|.+.|...++ .+.....+.|||.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~--~~~~~~p~~g~~~~ 349 (423)
T 3ez1_A 272 RWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGE--YATWTLPKGGYFIS 349 (423)
T ss_dssp HHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTS--SEEECCCSBSSCEE
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCC--ceEEeCCCccEEEE
Confidence 4455556666778888999999999987 5555555555555666666666666655543321 24444567899988
Q ss_pred cCC---CHHHHHHHHHhcceEEcCCC--------------ceecccCCcCCHHHHHHHHHhh
Q psy16707 83 TGL---NATQVEKLIKEHSVYLTKDG--------------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 83 ~gL---~~~qv~~L~~~~~IY~~~~G--------------Rinvagl~~~ni~~va~ai~~v 127 (420)
..+ +.+++..+-++++|++.+.| ||+++.++..+|+..+++|.++
T Consensus 350 ~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 411 (423)
T 3ez1_A 350 LDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAAC 411 (423)
T ss_dssp EEESSSCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 765 56788877789999998722 8999888999999999988776
No 187
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=97.59 E-value=0.00047 Score=68.90 Aligned_cols=119 Identities=13% Similarity=0.065 Sum_probs=80.8
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCccccccccceee
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGD-PKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCY 82 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~-~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~-~~~~~w~~i~~Q~GmFs~ 82 (420)
..+....+....+++..+..++...|.+ ..+ .+.++.++++++..|..+.+.|++. ..-+.+.....+.|||.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~ 354 (427)
T 3ppl_A 279 KWYTGHAGIRGIGPNKVNQLAHARYFGDAEGV----RAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFIS 354 (427)
T ss_dssp HHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEE
T ss_pred HHHHHHhhcccCCCCHHHHHHHHHHHhChhhH----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEE
Confidence 3455555666778888899999999998 334 3444445555555555555555431 111234555667899998
Q ss_pred cCCC---HHHHHHHHHhcceEEcCCC--------------ceecccCCcCCHHHHHHHHHhh
Q psy16707 83 TGLN---ATQVEKLIKEHSVYLTKDG--------------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 83 ~gL~---~~qv~~L~~~~~IY~~~~G--------------Rinvagl~~~ni~~va~ai~~v 127 (420)
..+. .+++..+-.+++|++.+.| ||+++..+..+|+..+++|.++
T Consensus 355 ~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~ 416 (427)
T 3ppl_A 355 LDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATC 416 (427)
T ss_dssp EECSTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred EECCcchHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 8775 6676666678899998732 9999888889999998888775
No 188
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=97.59 E-value=0.00019 Score=69.31 Aligned_cols=82 Identities=13% Similarity=0.080 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccc-CC--CCceEEecCCCH-----HHHHHHHHhCCeEEeCC----C--cE
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPW-NHI-TD--QIGMFCYTGLNA-----TQVEKLIKEHSVYLTKD----G--RI 398 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w-~~i-~~--q~GmF~~~~l~~-----~~v~~Ll~e~~Vy~~p~----g--Ri 398 (420)
++.++++++++|+.+.+.|++++ + + ... .+ +.|+|.|+.++. +.+++| .++||.+.|+ + ||
T Consensus 260 ~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~~~iRi 335 (360)
T 1w23_A 260 AEAIAKQNEEKAKIIYDTIDESN--G-FYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKA-KEQGFVGLNGHRSVGGCRA 335 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT--T-SSEESSCGGGBCSSEEEEECSSHHHHHHHHHHH-HHTTEESCBCCTTTCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc--C-cccccCCchhccCcEEEEEcCCCccHHHHHHHH-HHCCeeeecCCCCCCeEEE
Confidence 66778999999999999999865 1 3 322 12 357677765542 334554 5789999875 2 99
Q ss_pred EEccc-CCCCHHHHHHHHHHHh
Q psy16707 399 SMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 399 s~agl-~~~ni~~la~AI~~vv 419 (420)
+++.. +.+.++++.++|.+++
T Consensus 336 s~~~~~~~~~i~~~~~~l~~~~ 357 (360)
T 1w23_A 336 SIYNAVPIDACIALRELMIQFK 357 (360)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHH
Confidence 98753 6677999999998864
No 189
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=97.54 E-value=0.0012 Score=63.37 Aligned_cols=81 Identities=7% Similarity=-0.012 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC----CCCceEEecCC--CH-HHHHHHHHhCCeEEeCC------C--c
Q psy16707 334 VKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT----DQIGMFCYTGL--NA-TQVEKLIKEHSVYLTKD------G--R 397 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~----~q~GmF~~~~l--~~-~~v~~Ll~e~~Vy~~p~------g--R 397 (420)
++.+.+++++.++.+.+.|+++ | +.... ...+++.+..+ +. +.++.|. +.||.+.++ + |
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~g~~~~~~~~iR 338 (362)
T 3ffr_A 264 ADGIRKQTEEKAALINTYIESSKV----FSFGVEDAKLRSMTTIVANTTMLPGEINKILE-PFDMAVGAGYGSKKETQIR 338 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSS----EEESSSCGGGBCSSEEEEEESSCHHHHHHHHG-GGTEEEEECSGGGTTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHccC----ceeccCChhhcCCceEEEecCCCHHHHHHHHH-HCCeEEecCccccCCCEEE
Confidence 6778889999999999999987 5 44333 12334443322 44 4556775 459999864 2 9
Q ss_pred EEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 398 ISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~ag-l~~~ni~~la~AI~~vv 419 (420)
||+.. .+.+.++++.++|+++.
T Consensus 339 is~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 339 IANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHHh
Confidence 99864 47788999999998865
No 190
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=97.53 E-value=0.0005 Score=68.96 Aligned_cols=79 Identities=5% Similarity=0.097 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHhc----CCCCCCcccCCCCceEEecCCC------------------HHHHHHHHHhCCeEEe
Q psy16707 336 GMADRIISMRQSLKDNLQKE----GSNKPWNHITDQIGMFCYTGLN------------------ATQVEKLIKEHSVYLT 393 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~----g~~~~w~~i~~q~GmF~~~~l~------------------~~~v~~Ll~e~~Vy~~ 393 (420)
.+.++++++++.+.+.|+++ + +....+..|.|.|+.+. .+.++.|+ ++||++.
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~~~~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~ 399 (434)
T 2epj_A 325 PVYSVSREAAKALEEAASEVLDRTG----LPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIA 399 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCC----CcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEe
Confidence 45567777777777777664 4 22222345677664321 23445664 7899999
Q ss_pred CCC--cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 394 KDG--RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 394 p~g--Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
|++ |+.++ ..+.+.++++.++|.+++
T Consensus 400 ~~~~~~~~~~~~~t~e~i~~~l~~l~~~l 428 (434)
T 2epj_A 400 PSNLEAVFTGLPHQGEALEIAVEGLRSSL 428 (434)
T ss_dssp SSTTSCEECCTTCSHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEeccCCHHHHHHHHHHHHHHH
Confidence 976 44443 357788999988888764
No 191
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=97.53 E-value=0.00031 Score=70.32 Aligned_cols=120 Identities=14% Similarity=0.048 Sum_probs=88.4
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCccccccccceeec
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYT 83 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~-~~w~~i~~Q~GmFs~~ 83 (420)
..++...+....++|..+..++...|.++ ..|.+.++.++++++..|..|.+.|++.-.. +.|..+..+.|+|.+.
T Consensus 277 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~ 353 (422)
T 3d6k_A 277 EWYASHANVRGIGPNKLNQLAHAQFFGDV---AGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISV 353 (422)
T ss_dssp HHHHHHHHHHCSCCCHHHHHHHHHHHCSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEE
T ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEE
Confidence 34555555555677888888899999973 3567778888888888888888888653211 2355556678999887
Q ss_pred CCC---HHHHHHHHHhcceEEcCC------------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 84 GLN---ATQVEKLIKEHSVYLTKD------------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 gL~---~~qv~~L~~~~~IY~~~~------------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.+. .+++..+-++++|++.+. + |||++..+..+++..+++|.++
T Consensus 354 ~~~~~~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~ 414 (422)
T 3d6k_A 354 DVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATC 414 (422)
T ss_dssp EESTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Confidence 664 567777778899999762 1 8899888889999999988775
No 192
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=97.52 E-value=0.00037 Score=68.87 Aligned_cols=118 Identities=10% Similarity=0.061 Sum_probs=85.9
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG-MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~-m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
.+++...+....+++..+..++...|.+.+ |.+.+.. |+++++..|..+.+.|++.-....|.....+.|+|.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~ 344 (417)
T 3g7q_A 269 TAIANMNGIISLAPGGMGPAMMCEMIKRND----LLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWL 344 (417)
T ss_dssp HHHHHHHHHHCCCCCSHHHHHHHHHHHTTC----HHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEE
T ss_pred HHHHHhhcceeeCCCcHHHHHHHHHHcCcc----hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEE
Confidence 455555566666788888999999998865 4555554 77788888888888887643322466667788999876
Q ss_pred -----CCCHHHHHHHHHhcceEEcCC---------------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 84 -----GLNATQVEKLIKEHSVYLTKD---------------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 -----gL~~~qv~~L~~~~~IY~~~~---------------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
|++.+++...-.+++|++.+. + |||++. +..+|+..+++|.++
T Consensus 345 ~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~ 409 (417)
T 3g7q_A 345 WFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEE 409 (417)
T ss_dssp ECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHH
T ss_pred EcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 566777655447889998641 1 899986 888999999888765
No 193
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=97.51 E-value=7.1e-05 Score=77.27 Aligned_cols=102 Identities=16% Similarity=0.072 Sum_probs=64.4
Q ss_pred CceeecccccccCCCCCCchHHHHHHHHHH---HccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707 161 NKINLGVGAYRDDQGKPYVLPSVKQADEIV---LNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG 237 (420)
Q Consensus 161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~---~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~ 237 (420)
+.|+|++|. |+++ ++++.|.+|.... ..+...+.|. ..|.+ +++++++++-...+. +.+
T Consensus 90 ~~i~l~~g~--~~~~--~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~-------- 151 (464)
T 1ibj_A 90 LLVNLDNKF--DPFD--AMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRA-------- 151 (464)
T ss_dssp HHTCCCCSS--CTTC--CSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEE--------
T ss_pred eEEECCCCC--CCCC--CCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeE--------
Confidence 578999983 5666 4455555554321 0123457787 56877 677777766221111 122
Q ss_pred CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707 238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE 298 (420)
Q Consensus 238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~ 298 (420)
+.+.||+.|+..++. .+.| ||.|++++|+|+.|... ++..|++
T Consensus 152 --------------i~~~sGt~al~~~l~---~~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 198 (464)
T 1ibj_A 152 --------------FCFTSGMAALSAVTH---LIKN-GEEIVAGDDVYGGSDRLLSQVVPRSGVV 198 (464)
T ss_dssp --------------EEESSHHHHHHHHHT---TSCT-TCEEEEESSCCHHHHHHHHHTSGGGTCE
T ss_pred --------------EEECCHHHHHHHHHH---HhCC-CCEEEEECCCchhHHHHHHHHHHHcCCE
Confidence 567888999877654 3457 99999999999999764 3445654
No 194
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=97.49 E-value=0.0011 Score=66.17 Aligned_cols=81 Identities=11% Similarity=0.191 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CCCCCcccCCCCceEEecCC----CHH-HHHHHHHhCCeEEeCCC---cEEEc-ccCC
Q psy16707 336 GMADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTGL----NAT-QVEKLIKEHSVYLTKDG---RISMA-GVTS 405 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g-~~~~w~~i~~q~GmF~~~~l----~~~-~v~~Ll~e~~Vy~~p~g---Ris~a-gl~~ 405 (420)
.+.++++++|+.+.+.|++++ .++ +.. .+..|.|.|+.+ +.+ .++.|+ ++||++.|.+ |||+. ..+.
T Consensus 331 ~~~~~~~~~~~~l~~~L~~l~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~~iRis~~~~~t~ 407 (429)
T 1s0a_A 331 DWQQQVADIEVQLREQLAPARDAEM-VAD-VRVLGAIGVVETTHPVNMAALQKFFV-EQGVWIRPFGKLIYLMPPYIILP 407 (429)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGGCTT-EEE-EEEETTEEEEEESSCBCHHHHHHHHH-HTTEECCCBTTEEEECCCTTCCH
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCC-EEE-EEEeeEEEEEEECCcccHHHHHHHHH-HCCCEEeccCCEEEEECCCCCCH
Confidence 355778888999999998763 221 222 234577776532 344 446665 7899998853 78854 4688
Q ss_pred CCHHHHHHHHHHHh
Q psy16707 406 KNVGYLAKAIHAVT 419 (420)
Q Consensus 406 ~ni~~la~AI~~vv 419 (420)
++++++.++|.+++
T Consensus 408 e~i~~~~~~l~~~~ 421 (429)
T 1s0a_A 408 QQLQRLTAAVNRAV 421 (429)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998875
No 195
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=97.48 E-value=7.2e-05 Score=74.65 Aligned_cols=118 Identities=13% Similarity=0.097 Sum_probs=87.0
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCC-c
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQW-------LTEVKGMADRIISMRQSLKDNLQKEG------SNKPW-N 71 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W-------~~el~~m~~Ri~~~R~~l~~~L~~~~------~~~~w-~ 71 (420)
+|..+.....+++|..+..++...|.+.. +| .+.++.|+++++..|+.|.+.|++.+ ..+.+ .
T Consensus 239 ~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~ 315 (391)
T 3bwn_A 239 KMVEYIIVNSIGVSKESQVRTAKILNVLK---ETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCN 315 (391)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHHHHHH---HHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEET
T ss_pred HHHHHhcccccCCCHHHHHHHHHHHhCcc---hhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc
Confidence 44444444567888888888888887653 34 55688899999999999999998762 01111 1
Q ss_pred cc---cccccceeecCCC-HHHHHHHHHhcceEEcC-------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 72 HI---TDQIGMFCYTGLN-ATQVEKLIKEHSVYLTK-------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 72 ~i---~~Q~GmFs~~gL~-~~qv~~L~~~~~IY~~~-------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
++ ..+.|||.+..+. .+++..+-++++|++.+ .| |||++. +..+++..+++|.++
T Consensus 316 f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~-~~e~i~~~~~~L~~~ 383 (391)
T 3bwn_A 316 YFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS-REDVFNVFLERLANM 383 (391)
T ss_dssp TTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS-CHHHHHHHHHHHHSC
T ss_pred cccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHH
Confidence 11 3578999998886 45677777889999975 55 999997 788899999998876
No 196
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=97.48 E-value=0.0012 Score=66.73 Aligned_cols=99 Identities=11% Similarity=0.006 Sum_probs=63.1
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||++.|.+-++-| ...|.|.+|......+ ..+ .+..+..+.+.++++++...... ..+ |
T Consensus 48 g~~~lD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~--~~~~~~~~~~~~la~~l~~~~~~--~~~-v--------- 110 (452)
T 3n5m_A 48 GKRYLDGMSGLWCVNSG--YGRKELAEAAYKQLQT-LSY--FPMSQSHEPAIKLAEKLNEWLGG--EYV-I--------- 110 (452)
T ss_dssp CCEEEETTHHHHTCTTC--BCCHHHHHHHHHHHTT-CCC--CCTTSEEHHHHHHHHHHHHHHTS--CEE-E---------
T ss_pred CCEEEECCcchhhccCC--CCCHHHHHHHHHHHHh-cCC--cccccCCHHHHHHHHHHHHhCCC--Cce-E---------
Confidence 45679999986656667 3466777776665543 333 33455556666666655221110 112 3
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhc---C---CCCCEEEEcCCCCCCc
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF---F---PGEKVIYVPTPTWGNH 288 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~---~---p~gd~VlvpdP~w~ny 288 (420)
+.|.|||.|+..++.++..+ . + ++.|++.+|+|..|
T Consensus 111 -------------~~~~ggseA~~~al~~~~~~~~~~g~~~-~~~vi~~~~~yhg~ 152 (452)
T 3n5m_A 111 -------------FFSNSGSEANETAFKIARQYYAQKGEPH-RYKFMSRYRGYHGN 152 (452)
T ss_dssp -------------EEESSHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEETTCCCCS
T ss_pred -------------EEeCchHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCcCCC
Confidence 67999999999988766533 3 5 79999999998643
No 197
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=97.48 E-value=0.0022 Score=64.63 Aligned_cols=81 Identities=15% Similarity=0.126 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEE---e-cCCCH-HHHHHHHHhCCeEE--eCC-----C--c
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFC---Y-TGLNA-TQVEKLIKEHSVYL--TKD-----G--R 397 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~---~-~~l~~-~~v~~Ll~e~~Vy~--~p~-----g--R 397 (420)
.++.+.+++.+.++.+.+.|+++ | ++...+ ..+|. + .+.+. +.+++|. ++||.+ .++ + |
T Consensus 341 g~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~~~~~~lR 414 (438)
T 1wyu_A 341 GLREVALKSVEMAHKLHALLLEVPG----VRPFTP-KPFFNEFALALPKDPEAVRRALA-ERGFHGATPVPREYGENLAL 414 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSTT----CEECSC-SSBCSEEEEECSSCHHHHHHHHH-HTTCCCCEECCTTSCSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC----eEECCC-CCeEEEEEEeCCCCHHHHHHHHH-HCCceeccccccccCCCeEE
Confidence 36778889999999999999987 6 454433 23433 2 23344 4456665 669998 442 3 8
Q ss_pred EEEccc-CCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl-~~~ni~~la~AI~~vv 419 (420)
|++... +.++++++.++|.+++
T Consensus 415 is~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 415 FAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHC
T ss_pred EEecccCCHHHHHHHHHHHHHHh
Confidence 888743 5668999999998864
No 198
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=97.46 E-value=0.00045 Score=69.06 Aligned_cols=80 Identities=13% Similarity=0.097 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHhcC--CCCCCcccCCCCceEEecCC-------------CHHHHHHHHHhCCeEEeCC------
Q psy16707 337 MADRIISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGL-------------NATQVEKLIKEHSVYLTKD------ 395 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g--~~~~w~~i~~q~GmF~~~~l-------------~~~~v~~Ll~e~~Vy~~p~------ 395 (420)
+.++++++|+.+.+.|++++ .+ +....+..|+|.|+.+ ..+.++.|+ +.||++.|+
T Consensus 326 ~~~~~~~~~~~l~~~l~~l~~~~~--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~ 402 (433)
T 1zod_A 326 LVARANVMGDRLRRGLLDLMERFD--CIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMG 402 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCT--TEEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCC
Confidence 45677777778877777652 22 1112345577776422 123456665 789999874
Q ss_pred C--cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 396 G--RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 g--Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
+ ||+++ ..+.++++.+.++|.+++
T Consensus 403 ~~lRi~~~~~~t~~~i~~~l~~l~~~l 429 (433)
T 1zod_A 403 GVFRIAPPLTVSEDEIDLGLSLLGQAI 429 (433)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence 3 77654 467889999999988765
No 199
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=97.46 E-value=0.0013 Score=65.33 Aligned_cols=91 Identities=14% Similarity=0.186 Sum_probs=52.3
Q ss_pred CCCCchHHHHHHHHHHHccCCCCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcccccccccccee
Q psy16707 175 GKPYVLPSVKQADEIVLNKNLDKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIV 252 (420)
Q Consensus 175 g~~~~~~~V~~a~~~~~~~~~~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v 252 (420)
..+++.+.+.++.....+....+.|. +.....++++.+++++ |.+ .. +
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~-g~~-------~~----------------------i 84 (398)
T 1gc0_A 35 TATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLE-GGE-------AG----------------------L 84 (398)
T ss_dssp CSCBCCC---------------------CCHHHHHHHHHHHHHH-TCS-------EE----------------------E
T ss_pred CCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHh-CCC-------cE----------------------E
Confidence 34566777777765332222345555 5556778899998876 422 11 5
Q ss_pred ecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 253 qt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
.+.+||.|+..++..+ +.| ||.|++++|+|+.+...+ +..|++
T Consensus 85 ~~~sG~~a~~~~l~~~--~~~-gd~vl~~~~~~~~~~~~~~~~~~~~g~~ 131 (398)
T 1gc0_A 85 ALASGMGAITSTLWTL--LRP-GDEVLLGNTLYGCTFAFLHHGIGEFGVK 131 (398)
T ss_dssp EESSHHHHHHHHHHHH--CCT-TCEEEEESSCCSHHHHHHHHTGGGGTCE
T ss_pred EECCHHHHHHHHHHHH--hcC-CCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence 6788899999888755 457 899999999999988766 445553
No 200
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=97.44 E-value=4.7e-05 Score=76.92 Aligned_cols=125 Identities=17% Similarity=0.133 Sum_probs=83.2
Q ss_pred ccccCCChHHHHHHHHH--ccCCCCceeecccc-cccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAFK--KDTNVNKINLGVGA-YRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL 215 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~-y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~ 215 (420)
+..+.+.+++...+..+ +..+.++++|..|. |.|-....++ +.|+++....... ....|.+..|..+|+++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~-~~~~y~~~~~~~~l~~~la~~ 88 (467)
T 1ax4_A 11 IKMVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMIT-GDEAYAGSRNYYDLKDKAKEL 88 (467)
T ss_dssp EEEEEECCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHT-CCCCSSSCHHHHHHHHHHHHH
T ss_pred hceeecccccchhHHHHHHHhcCcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhh-cccccccCccHHHHHHHHHHH
Confidence 44444554443333221 23467889999985 6666555555 5666655444332 345798888999999999998
Q ss_pred HcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc--CCCCCE---EEEcCCCCCCcHH
Q psy16707 216 AYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF--FPGEKV---IYVPTPTWGNHIP 290 (420)
Q Consensus 216 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--~p~gd~---VlvpdP~w~ny~~ 290 (420)
+ |.+ +| +.|.|||.|+.+++..+... .| ||. |++++|.|+.+..
T Consensus 89 ~-~~~-------~v----------------------~~t~ggt~A~~~al~~~~~~~~~~-Gd~~~~viv~~~~~~~~~~ 137 (467)
T 1ax4_A 89 F-NYD-------YI----------------------IPAHQGRGAENILFPVLLKYKQKE-GKAKNPVFISNFHFDTTAA 137 (467)
T ss_dssp H-CCC-------EE----------------------EEESSHHHHHHHHHHHHHHHHHHT-TCCSSCEEEESSCCHHHHH
T ss_pred c-CCC-------cE----------------------EEcCCcHHHHHHHHHHHHHhhccC-CCccceEEEeccccchhhH
Confidence 7 321 23 67999999999988755321 06 898 9999999888777
Q ss_pred HHhhcC
Q psy16707 291 ICKHTG 296 (420)
Q Consensus 291 i~~~aG 296 (420)
.++..|
T Consensus 138 ~~~~~g 143 (467)
T 1ax4_A 138 HVELNG 143 (467)
T ss_dssp HHHHTT
T ss_pred HHhccC
Confidence 666554
No 201
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=97.44 E-value=0.00037 Score=67.47 Aligned_cols=74 Identities=9% Similarity=0.109 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHhc-CCCCCCcc-cCCCCceEEecCC--C----HHHHHHHHHhCCeEEeCC-----C----cEEEcc
Q psy16707 340 RIISMRQSLKDNLQKE-GSNKPWNH-ITDQIGMFCYTGL--N----ATQVEKLIKEHSVYLTKD-----G----RISMAG 402 (420)
Q Consensus 340 r~~~~R~~l~~~L~~~-g~~~~w~~-i~~q~GmF~~~~l--~----~~~v~~Ll~e~~Vy~~p~-----g----Ris~ag 402 (420)
++.++|+.+.+.|+++ | +.. ..++.+.|.|+.+ . .+.+...+.++||.+.|+ | |+++..
T Consensus 260 ~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~ 335 (357)
T 3lws_A 260 QYYEQAKQLAEQFNALPG----VHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGD 335 (357)
T ss_dssp HHHHHHHHHHHHHHTSTT----EEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCT
T ss_pred HHHHHHHHHHHHHHhCCC----CeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecc
Confidence 4577788899999886 4 444 3456777777533 2 344545557899999876 2 666542
Q ss_pred c-CCCCHHHHHHHHHH
Q psy16707 403 V-TSKNVGYLAKAIHA 417 (420)
Q Consensus 403 l-~~~ni~~la~AI~~ 417 (420)
- .....+.+.+++++
T Consensus 336 ~~~~~~~~~l~~al~~ 351 (357)
T 3lws_A 336 AYGELDQQTRDAGFAR 351 (357)
T ss_dssp TGGGSCHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHH
Confidence 1 11345555555544
No 202
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=97.43 E-value=0.00014 Score=72.15 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=85.2
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLK-AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~-~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
.+....+....++|..+...+...|.++..+ ..|.+.++.++++++..|+.|.+.|++.+ |..+..+.|+|.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~ 343 (422)
T 3fvs_A 268 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVG----LKPIIPQGSYFLITD 343 (422)
T ss_dssp HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEE
T ss_pred HHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEe
Confidence 3444444444556666777777777653322 23556677889999999999999998763 666778999999987
Q ss_pred CCH------------------HHHHHHHHhcceEEcCC-------------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LNA------------------TQVEKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~------------------~qv~~L~~~~~IY~~~~-------------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
++. +.++.|.++++|++.+. | |||++. +..+|+..+++|.++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~ 418 (422)
T 3fvs_A 344 ISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQAMDEKLRKW 418 (422)
T ss_dssp CHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC-CHHHHHHHHHHHHHH
T ss_pred chhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 754 55777778899998752 2 789887 889999999888765
No 203
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=97.43 E-value=0.00039 Score=69.49 Aligned_cols=113 Identities=11% Similarity=0.132 Sum_probs=84.0
Q ss_pred hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
...+....+..++++|..+...+...|.+... +.+++++++++..|+.|.+.|++.+ |..+..+.|+|.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~ 367 (432)
T 3ei9_A 297 AKDFNRIICTCFNGASNISQAGALACLTPEGL-----EAMHKVIGFYKENTNIIIDTFTSLG----YDVYGGKNAPYVWV 367 (432)
T ss_dssp HHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTT----CCEEECSSSSEEEE
T ss_pred HHHHHHHhccccCCCCHHHHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHHHCC----ceecCCCcceEEEE
Confidence 45566666777888999999888888885433 3477789999999999999998863 66666678999888
Q ss_pred CCC----HHHHHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHh
Q psy16707 84 GLN----ATQVEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 84 gL~----~~qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~ 126 (420)
.+. .+.++.|.++++|++.+ .| |||++. +..+|+...+.|.+
T Consensus 368 ~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~rl~~ 423 (432)
T 3ei9_A 368 HFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENILEACRRFKQ 423 (432)
T ss_dssp ECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHHHHHHHHHH
Confidence 763 45678888899999864 23 677643 66666666666543
No 204
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=97.41 E-value=0.00013 Score=71.90 Aligned_cols=117 Identities=9% Similarity=0.014 Sum_probs=83.4
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGD-PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~-~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
.++...+....++|..+...+...|.+ ......|.+.++.++++++..|+.|.+.|++. .|..+..+.|+|.+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~ 336 (410)
T 3e2y_A 261 HLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV----GLKPIVPDGGYFIIAD 336 (410)
T ss_dssp HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT----TCEEEBCSBSSEEEEE
T ss_pred HHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC----CCeecCCCccEEEEEE
Confidence 444444554555666677777777653 22223456678889999999999999999876 3666778999998764
Q ss_pred CCH----------------HHHHHHHHhcceEEcCCC---------------ceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LNA----------------TQVEKLIKEHSVYLTKDG---------------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~----------------~qv~~L~~~~~IY~~~~G---------------Rinvagl~~~ni~~va~ai~~v 127 (420)
+.. +.+++|.++++|++.+.+ ||+++. +..+|+..+++|.++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 337 VSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK-KDSTLDAAEEIFRAW 409 (410)
T ss_dssp CGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC-CHHHHHHHHHHHHTC
T ss_pred chhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHhc
Confidence 432 667778889999986422 688765 888888888887654
No 205
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=97.37 E-value=0.00044 Score=69.33 Aligned_cols=105 Identities=18% Similarity=0.368 Sum_probs=80.3
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH--------
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-------- 87 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-------- 87 (420)
.+++.....++..+|.+.+...+ .++.++++++..|+.|.+.|++.+ |..+..+.|+|.+..+..
T Consensus 303 ~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~l~~~~~~~~~~ 375 (435)
T 3piu_A 303 GLVSSQTQHLLSAMLSDKKLTKN---YIAENHKRLKQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRHLLRSNTFE 375 (435)
T ss_dssp SCCCHHHHHHHHHHHHCHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGGGSSSSSHH
T ss_pred CCCCHHHHHHHHHHhcChHHHHH---HHHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEEcccccccCCch
Confidence 34444566777888887654333 456788999999999999998763 667777888999887753
Q ss_pred ---HHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 88 ---TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ---~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.+++|.++++|++.+. + ||+++.++..+|+..+++|.++
T Consensus 376 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~ 428 (435)
T 3piu_A 376 AEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428 (435)
T ss_dssp HHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 55678888889998641 2 8999878999999999998876
No 206
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=97.37 E-value=0.0012 Score=67.65 Aligned_cols=82 Identities=13% Similarity=0.110 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CHH-HHHHHHHhCCeEEeCCC---cEEEc-ccCCC
Q psy16707 336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QVEKLIKEHSVYLTKDG---RISMA-GVTSK 406 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~~-~v~~Ll~e~~Vy~~p~g---Ris~a-gl~~~ 406 (420)
.+.++++++++.+.+.|+++.. .+.-...+..|+|+++.+ +.. .++.|+ +.||++.|.| ||+.. ..+.+
T Consensus 360 ~~~~~~~~~~~~l~~~L~~l~~-~~~v~~vr~~G~~~~i~l~~~~~~~~~~~~l~-~~Gv~v~~~~~~lRi~p~~~~t~e 437 (457)
T 3tfu_A 360 DWRTRITELAAGLTAGLDTARA-LPAVTDVRVCGAIGVIECDRPVDLAVATPAAL-DRGVWLRPFRNLVYAMPPYICTPA 437 (457)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGG-STTEEEEEECSSCEEEEESSCCCHHHHHHHHH-HTTEECCCBTTEEEECCCTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCeeeeecCCeEEEEEECCcccHHHHHHHHH-HCCeEEEecCCEEEEECCCCCCHH
Confidence 3456677777788888877631 111112345678876532 334 446665 6699999865 77653 35889
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
+++++.++|.+++
T Consensus 438 ei~~~l~~L~~~l 450 (457)
T 3tfu_A 438 EITQITSAMVEVA 450 (457)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 207
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=97.34 E-value=0.00016 Score=72.83 Aligned_cols=101 Identities=17% Similarity=0.115 Sum_probs=72.2
Q ss_pred cCCCCceeecccc-cccCCCCC---CchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeee
Q psy16707 157 DTNVNKINLGVGA-YRDDQGKP---YVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIV 232 (420)
Q Consensus 157 d~~~~kInL~iG~-y~d~dg~~---~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~ 232 (420)
..+.+.++|+.|. |.|-.... ++.+.+.++.. . ....|.+..|..+|++++++++ |.+ .+
T Consensus 30 ~~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~---~--~~~~y~~~~~~~~l~~~la~~~-~~~-------~~--- 93 (456)
T 2ez2_A 30 EAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM---M--GDEAYAGSENFYHLERTVQELF-GFK-------HI--- 93 (456)
T ss_dssp HTTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT---T--CCCCSSSCHHHHHHHHHHHHHH-CCS-------EE---
T ss_pred HCCCCcccCCcccceeeeccccCCccCCHHHHHHhh---c--chhhcccChhHHHHHHHHHHHh-CCC-------cE---
Confidence 3566789999985 66543322 33455554432 1 3457988889999999999987 322 22
Q ss_pred cccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCC-CCcHHHHhhcCc
Q psy16707 233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTW-GNHIPICKHTGL 297 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w-~ny~~i~~~aG~ 297 (420)
+.|.|||.|+.+++..+ +.| || ++++|+| +.|...++.+|+
T Consensus 94 -------------------~~~~~gt~a~~~al~~l--~~~-gd--i~~~~~~~~~~~~~~~~~G~ 135 (456)
T 2ez2_A 94 -------------------VPTHQGRGAENLLSQLA--IKP-GQ--YVAGNMYFTTTRYHQEKNGA 135 (456)
T ss_dssp -------------------EEESSHHHHHHHHHHHH--CCT-TC--EEEESSCCHHHHHHHHHTTC
T ss_pred -------------------EEeCCcHHHHHHHHHHh--CCC-CC--EeccccccchhHHHHHHcCC
Confidence 67999999999988755 557 88 8899999 888877777665
No 208
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=97.23 E-value=0.00033 Score=69.54 Aligned_cols=87 Identities=11% Similarity=0.075 Sum_probs=64.8
Q ss_pred CCCchHHHHHHHHHHHccCCCCCCCCCCC--CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceee
Q psy16707 176 KPYVLPSVKQADEIVLNKNLDKEYAPIIG--APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQ 253 (420)
Q Consensus 176 ~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G--~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vq 253 (420)
.|...+.|.++....... .|.+..| .++|++++++++ |. +.| +.
T Consensus 7 ~p~~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~-~~-------~~v----------------------~~ 52 (394)
T 1o69_A 7 PPHMGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYS-KS-------ENA----------------------LA 52 (394)
T ss_dssp -----CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHH-CC-------SEE----------------------EE
T ss_pred CCCCCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHh-CC-------CcE----------------------EE
Confidence 355666777776665532 4888789 999999999987 42 223 67
Q ss_pred cccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 254 GISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 254 t~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
|.|||.|+.+++..+. +.| ||.|++++|+|+.|...++..|++
T Consensus 53 ~~ggt~al~~~~~~l~-~~~-gd~Vl~~~~~~~~~~~~~~~~g~~ 95 (394)
T 1o69_A 53 LNSATAALHLALRVAG-VKQ-DDIVLASSFTFIASVAPICYLKAK 95 (394)
T ss_dssp ESCHHHHHHHHHHHTT-CCT-TCEEEEESSSCGGGTHHHHHTTCE
T ss_pred eCCHHHHHHHHHHHcC-CCC-CCEEEECCCccHHHHHHHHHcCCE
Confidence 9999999999887541 457 899999999999999999888875
No 209
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=97.17 E-value=0.00077 Score=67.14 Aligned_cols=90 Identities=20% Similarity=0.161 Sum_probs=64.0
Q ss_pred CCchHHHHHHHHHHHccCCCCCCCCCCCC----HHHHHHHHHHHcCCCCccccCCceeeecccCCCCcccccccccccee
Q psy16707 177 PYVLPSVKQADEIVLNKNLDKEYAPIIGA----PDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIV 252 (420)
Q Consensus 177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~----~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v 252 (420)
++.++.|.++......+.....|.+..|. .++++.+++++ |.+ .+ +
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~-g~~-------~~----------------------i 61 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN-GVP-------YC----------------------V 61 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH-TCS-------EE----------------------E
T ss_pred CCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh-CCC-------cE----------------------E
Confidence 45567787777776654222348888895 55666666544 432 11 5
Q ss_pred ecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 253 qt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.+.+||.|+.+++..+. +.| ||.|++++|+|+.+...++..|++
T Consensus 62 ~~~~gt~al~~~~~~~~-~~~-gd~Vl~~~~~~~~~~~~~~~~g~~ 105 (418)
T 2c81_A 62 PTTSGSTALMLALEALG-IGE-GDEVIVPSLTWIATATAVLNVNAL 105 (418)
T ss_dssp EESCHHHHHHHHHHHTT-CCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred EeCCHHHHHHHHHHHcC-CCC-cCEEEECCCccHhHHHHHHHcCCE
Confidence 67889999999887541 457 899999999999999999888875
No 210
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=97.16 E-value=0.00063 Score=65.80 Aligned_cols=75 Identities=9% Similarity=0.086 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCccc-CCCCceEEe--cCCC----HHHHHHHHHhCCeEEeCCC----------cEEE
Q psy16707 339 DRIISMRQSLKDNLQKE-GSNKPWNHI-TDQIGMFCY--TGLN----ATQVEKLIKEHSVYLTKDG----------RISM 400 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~-g~~~~w~~i-~~q~GmF~~--~~l~----~~~v~~Ll~e~~Vy~~p~g----------Ris~ 400 (420)
.++.++|+.+.+.|+++ | +... .++.+.|.| ++.+ .+++.+.+.++||.+.|+. |+++
T Consensus 261 ~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i 336 (359)
T 3pj0_A 261 AEYFEAAKGLAERFNSCSG----VKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSV 336 (359)
T ss_dssp HHHHHHHHHHHHHHHTSTT----EEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhhCCC----ceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEe
Confidence 45677888999999986 4 4442 344555554 4443 3455555578999999872 6665
Q ss_pred cc-cCCCCHHHHHHHHHH
Q psy16707 401 AG-VTSKNVGYLAKAIHA 417 (420)
Q Consensus 401 ag-l~~~ni~~la~AI~~ 417 (420)
.. ......+.+.+++++
T Consensus 337 ~~~~~~~~~e~l~~~l~~ 354 (359)
T 3pj0_A 337 GDAFAEIPAKNLELVFRC 354 (359)
T ss_dssp CTTGGGSCHHHHHHHHHH
T ss_pred cCccccCCHHHHHHHHHH
Confidence 31 122345555555544
No 211
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=97.16 E-value=0.00092 Score=65.51 Aligned_cols=109 Identities=12% Similarity=0.056 Sum_probs=80.0
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.+....+....++|..+..++...|.+. +.++.++++++..|+.|.+.|++. +.....+.|+|.+..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~ 333 (396)
T 3jtx_A 266 NFLLYRTYHGSAMSIPVQRASIAAWDDE-------QHVIDNRRLYQEKFERVIPILQQV-----FDVKLPDASFYIWLKV 333 (396)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHHHHHTTT-----SCCCCCSSSSEEEEEC
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHhc-----CCccCCCeeEEEEEEC
Confidence 4444444444567777788888888752 456778889999999999999764 3344567799988776
Q ss_pred C----HHHHHHHHHhcceEEcC--------------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 N----ATQVEKLIKEHSVYLTK--------------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~----~~qv~~L~~~~~IY~~~--------------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
. .+-++.|.++++|++.+ .+ ||+++. +..+++..+++|.++
T Consensus 334 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 334 PDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAAEDIVSL 394 (396)
T ss_dssp TTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence 5 45567787889999843 12 788887 888999999888765
No 212
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=97.09 E-value=0.0021 Score=63.23 Aligned_cols=113 Identities=18% Similarity=0.211 Sum_probs=78.9
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++.+.....+++|..+..++...|.++++..+| ++.++++++..|+.|.+.|++.+ |.....+.|+|.+..+
T Consensus 255 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 327 (385)
T 1b5p_A 255 AMASVSRQSTTSPDTIAQWATLEALTNQEASRAF---VEMAREAYRRRRDLLLEGLTALG----LKAVRPSGAFYVLMDT 327 (385)
T ss_dssp HHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSBTTEEEEEC
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHH---HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEec
Confidence 4444444555678888888888888764333344 77788999999999999998863 5556677888877544
Q ss_pred -----CHHH-HHHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 -----NATQ-VEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 -----~~~q-v~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.++ ++.|. +++|++.+. | |||++ .+..+++...+.|.++
T Consensus 328 ~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~-~~~~~i~~~l~~l~~~ 381 (385)
T 1b5p_A 328 SPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYA-TSEENLRKALERFARV 381 (385)
T ss_dssp TTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHGGGG
T ss_pred CCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEEec-CCHHHHHHHHHHHHHH
Confidence 4554 46676 889998642 2 89987 6777777777766554
No 213
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=97.09 E-value=0.00028 Score=70.05 Aligned_cols=97 Identities=21% Similarity=0.124 Sum_probs=73.2
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG 239 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 239 (420)
.+.||++.|. ++..+.|.+|....... ..|.+..|..+|++++++++ |.+ .+
T Consensus 30 ~~~id~~~~~-------~~~~~~v~~a~~~~~~~---~~y~~~~~~~~l~~~la~~~-~~~-------~~---------- 81 (399)
T 2oga_A 30 VPFLDLKAAY-------EELRAETDAAIARVLDS---GRYLLGPELEGFEAEFAAYC-ETD-------HA---------- 81 (399)
T ss_dssp BCSCCHHHHH-------HHTHHHHHHHHHHHHHH---TCCSSSHHHHHHHHHHHHHT-TSS-------EE----------
T ss_pred CcccccCcCC-------CCCCHHHHHHHHHHHhc---CCCCCchhHHHHHHHHHHHH-CCC-------eE----------
Confidence 4678999996 12237777777766543 36777788999999999976 432 12
Q ss_pred ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.|||.|+.+++..+. +.| ||.|++++|+|+.+...++..|++
T Consensus 82 ------------v~~~~Gt~a~~~~l~~~~-~~~-gd~vl~~~~~~~~~~~~~~~~g~~ 126 (399)
T 2oga_A 82 ------------VGVNSGMDALQLALRGLG-IGP-GDEVIVPSHTYIASWLAVSATGAT 126 (399)
T ss_dssp ------------EEESCHHHHHHHHHHHTT-CCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred ------------EEecCHHHHHHHHHHHhC-CCC-cCEEEECCCccHHHHHHHHHCCCE
Confidence 567889999999886541 457 899999999999999998888764
No 214
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=97.07 E-value=0.016 Score=58.52 Aligned_cols=122 Identities=8% Similarity=-0.058 Sum_probs=72.9
Q ss_pred hHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCc
Q psy16707 146 SSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCP 222 (420)
Q Consensus 146 ~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~ 222 (420)
.++.........+....+|++.+. + .+..+.|.++.....+. ....|....|..++.+++.+++ +|.+.
T Consensus 27 ~v~~~~~~~~~~~~~~~~~~~~f~-----~-~~~~~~v~e~~~~a~~~-~~~~~~~~~~~~~l~~~~~~~la~l~g~~~- 98 (452)
T 2dgk_A 27 VAFQIINDELYLDGNARQNLATFC-----Q-TWDDENVHKLMDLSINK-NWIDKEEYPQSAAIDLRCVNMVADLWHAPA- 98 (452)
T ss_dssp HHHHHHHHHGGGSCCCTTBCSCCS-----C-CCCCHHHHHHHHHTTTC-BTTCTTTCHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred HHHHHHHHHhcCCCCCccCCCCee-----C-CCchHHHHHHHHHHhcc-CCCChhhChhHHHHHHHHHHHHHHHhCCCc-
Confidence 455444444323333345665543 2 34557788777765543 2344666668788888877665 45431
Q ss_pred cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHh-c-----CCCC-----CEEEEcCCCCCCcHHH
Q psy16707 223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN-F-----FPGE-----KVIYVPTPTWGNHIPI 291 (420)
Q Consensus 223 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~-~-----~p~g-----d~VlvpdP~w~ny~~i 291 (420)
+.. . +.+++.|.|||.|+.+++..+.. + .| | +.|++|+ +++.|...
T Consensus 99 ----~~~-~----------------~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~-G~~~~~~~vi~~~-~h~~~~~~ 155 (452)
T 2dgk_A 99 ----PKN-G----------------QAVGTNTIGSSEACMLGGMAMKWRWRKRMEAA-GKPTDKPNLVCGP-VQICWHKF 155 (452)
T ss_dssp ----CTT-S----------------CCEEEEESSHHHHHHHHHHHHHHHHHHHHHHT-TCCCSCCEEEESS-CCHHHHHH
T ss_pred ----ccc-c----------------CCceEEeCCHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcEEEECC-CcHHHHHH
Confidence 110 0 00126799999999887654422 0 13 3 5999999 99999988
Q ss_pred HhhcCcc
Q psy16707 292 CKHTGLE 298 (420)
Q Consensus 292 ~~~aG~~ 298 (420)
++..|++
T Consensus 156 ~~~~G~~ 162 (452)
T 2dgk_A 156 ARYWDVE 162 (452)
T ss_dssp HHHTTCE
T ss_pred HHHcCce
Confidence 8887765
No 215
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=97.05 E-value=0.0021 Score=64.12 Aligned_cols=104 Identities=16% Similarity=0.324 Sum_probs=78.6
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH---------
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA--------- 87 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~--------- 87 (420)
+++..+..++...|.+.++.++| ++.++++++..|+.|.+.|++.+ |..+..+.|+|.+.-+..
T Consensus 299 ~~~~~~~~a~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~ 371 (428)
T 1iay_A 299 LVSTQTQYFLAAMLSDEKFVDNF---LRESAMRLGKRHKHFTNGLEVVG----IKCLKNNAGLFCWMDLRPLLRESTFDS 371 (428)
T ss_dssp CCCHHHHHHHHHHTTCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSSEEEEECGGGCSSSSHHH
T ss_pred cCCHHHHHHHHHHhcChHHHHHH---HHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEechhhcCCCchhH
Confidence 45556777888999987643444 55678899999999999998863 444455689998776642
Q ss_pred --HHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 88 --TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 --~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+-.++|.++++|++.+. + ||+++..+..+++.++++|.++
T Consensus 372 ~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~ 423 (428)
T 1iay_A 372 EMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF 423 (428)
T ss_dssp HHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence 34577888889998642 3 8999878899999999998876
No 216
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=97.03 E-value=0.038 Score=56.65 Aligned_cols=84 Identities=10% Similarity=0.237 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCC-CCceEEe--cCC---CHHHHHHHHHhCCeEEeC---CC----c
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITD-QIGMFCY--TGL---NATQVEKLIKEHSVYLTK---DG----R 397 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~-q~GmF~~--~~l---~~~~v~~Ll~e~~Vy~~p---~g----R 397 (420)
+-++.+.++..++++.+.+.|++. | ++.+.+ +.+++++ .+. +.+..++|.++..+++.| .| |
T Consensus 376 ~g~~~~~~~~~~~a~~l~~~L~~~~g----~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR 451 (481)
T 4e1o_A 376 KNLQAHVRHGTEMAKYFESLVRNDPS----FEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIR 451 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTT----EECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----eEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEE
Confidence 446677788899999999999986 4 554433 3444444 232 235567887776677765 23 8
Q ss_pred EEEccc--CCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGV--TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl--~~~ni~~la~AI~~vv 419 (420)
|++++- +.++|+++.++|.++.
T Consensus 452 ~~~~~~~tt~~di~~~~~~i~~~~ 475 (481)
T 4e1o_A 452 FTVTSQFTTRDDILRDWNLIRDAA 475 (481)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Confidence 887754 4578999999988763
No 217
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=97.00 E-value=0.001 Score=64.46 Aligned_cols=89 Identities=16% Similarity=0.042 Sum_probs=67.9
Q ss_pred CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecc
Q psy16707 176 KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGI 255 (420)
Q Consensus 176 ~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~ 255 (420)
.+++++.|.+|......+ ..|.|..+..+|++++++++ |.+ .+ +.|.
T Consensus 8 ~~~~~~~v~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~v----------------------~~~~ 54 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNS---KQLTQGKRSLLFEEALCEFL-GVK-------HA----------------------LVFN 54 (375)
T ss_dssp CCCCCHHHHHHHHHHHTS---SCCSSSHHHHHHHHHHHHHH-TCS-------EE----------------------EEES
T ss_pred CCCCCHHHHHHHHHHHHc---CcccCChHHHHHHHHHHHHh-CCC-------eE----------------------EEeC
Confidence 467888888888776642 23556667889999999976 422 23 6799
Q ss_pred cchHHHHHHHHHHHh-cCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 256 SGTGSLRVGAAFLKN-FFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 256 gGtgal~~~~~~l~~-~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
|||.|+.+++..+.. +.| ||.|++++|+|+.+...++..|++
T Consensus 55 ggt~al~~~~~~~~~~~~~-gd~Vl~~~~~~~~~~~~~~~~g~~ 97 (375)
T 2fnu_A 55 SATSALLTLYRNFSEFSAD-RNEIITTPISFVATANMLLESGYT 97 (375)
T ss_dssp CHHHHHHHHHHHSSCCCTT-SCEEEECSSSCTHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHhcccCCC-CCEEEECCCccHhHHHHHHHCCCE
Confidence 999999998875411 447 899999999999999998888875
No 218
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=97.00 E-value=0.0024 Score=62.81 Aligned_cols=105 Identities=14% Similarity=0.147 Sum_probs=77.3
Q ss_pred CccchHHHHHHHHhCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH-HH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWL-TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QV 90 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~-~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~-qv 90 (420)
+++.....++...|.+. .|. +.++.++++++..|+.|.+.|++... + |..+..+.|+|.+..+ +.+ -+
T Consensus 278 ~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 351 (407)
T 2zc0_A 278 CAPAISQYIALEYLKRG----YFEKYHLEGALLGYKEKRDIMLKALENHLP-N-AEFTKPIAGMFVMFFLPEGADGISFA 351 (407)
T ss_dssp SSCHHHHHHHHHHHHTT----HHHHHTTTTHHHHHHHHHHHHHHHHHHHCT-T-SCBCCCSBSSEEEEECSTTCCHHHHH
T ss_pred CCCHHHHHHHHHHHHcC----CchHHHHHHHHHHHHHHHHHHHHHHHHhCC-C-CEEecCCCcEEEEEEcCCCCCHHHHH
Confidence 34556677777778764 355 56788899999999999999987532 2 5555567888877655 344 45
Q ss_pred HHHHHhcceEEcCC----------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 91 EKLIKEHSVYLTKD----------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 91 ~~L~~~~~IY~~~~----------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.|.++|+|++.+. + ||+++..+..+++.++++|.++
T Consensus 352 ~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 400 (407)
T 2zc0_A 352 NELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKL 400 (407)
T ss_dssp HHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 67888889998642 2 8899877889999999988775
No 219
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=96.99 E-value=0.00078 Score=67.08 Aligned_cols=90 Identities=11% Similarity=-0.019 Sum_probs=64.3
Q ss_pred CCCCchHHHHHHHHHHHccCCCCCCCC-CCCCHHHHHHH-HHHHcCCCCccccCCceeeecccCCCCcccccccccccee
Q psy16707 175 GKPYVLPSVKQADEIVLNKNLDKEYAP-IIGAPDFGKLA-AQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIV 252 (420)
Q Consensus 175 g~~~~~~~V~~a~~~~~~~~~~~~Y~p-~~G~~~fr~a~-~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v 252 (420)
+++++++.|.+|...+..+ . .|.+ .....+|++++ ++++ |.. ..+ +
T Consensus 10 p~~~~~~~i~~a~~~~~~~-~--~~~~~~~~~~~l~~~~~a~~~-g~~------~~~----------------------v 57 (377)
T 3ju7_A 10 ASTVPVIEYLDELKEIDAS-H--IYTNYGPINQRFEQTIMSGFF-QNR------GAV----------------------T 57 (377)
T ss_dssp CCCCCGGGGHHHHHHHHHH-T--CCSSSCHHHHHHHHHHHHHTS-TTC------SEE----------------------E
T ss_pred CCCCCcHHHHHHHHHHHHc-C--CcccCCHHHHHHHHHHHHHHh-CCC------CeE----------------------E
Confidence 3446677777776666543 2 2333 23478999999 8754 411 112 6
Q ss_pred ecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 253 qt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.+.|||.|+.+++..+ .+.| ||+|++|+|+|+.|...++.+|++
T Consensus 58 ~~~sgt~al~~al~~l-~~~~-Gd~Vi~~~~~~~~~~~~~~~~G~~ 101 (377)
T 3ju7_A 58 TVANATLGLMAAIQLK-KRKK-GKYALMPSFTFPATPLAAIWCGLE 101 (377)
T ss_dssp EESCHHHHHHHHHHHH-SCTT-CCEEEEESSSCTHHHHHHHHTTCE
T ss_pred EeCCHHHHHHHHHHHc-CCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence 7999999999887644 2457 999999999999999999988886
No 220
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=96.98 E-value=0.029 Score=57.97 Aligned_cols=84 Identities=11% Similarity=0.172 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEec--C---CCHHHH-HHHHHhCCeEE----eCC----
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--G---LNATQV-EKLIKEHSVYL----TKD---- 395 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~~--~---l~~~~v-~~Ll~e~~Vy~----~p~---- 395 (420)
+.++.+.++..+.++.|.+.|++.|. ++.+.+ +.+++++. + ++...+ ++| .+.||++ .|.
T Consensus 338 ~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~p~~~~~ 413 (502)
T 3hbx_A 338 EGYRNVMENCRENMIVLREGLEKTER---FNIVSKDEGVPLVAFSLKDSSCHTEFEISDML-RRYGWIVPAYTMPPNAQH 413 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTC---EEECSCSSSSSEEEEEESSCSSCCHHHHHHHH-HTTTCBCCEEECCTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC---EEEEeCCCCceEEEEEecCCCcCCHHHHHHHH-HhCCcEEeeccCCcccCC
Confidence 34556667777888899999998752 554444 45566542 2 455444 555 6889875 232
Q ss_pred ---CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 396 ---GRISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ---gRis~agl-~~~ni~~la~AI~~vv 419 (420)
-||++..- +.+.++.+.++|.+++
T Consensus 414 ~~~lRisv~~~~t~edid~li~~L~~~l 441 (502)
T 3hbx_A 414 ITVLRVVIREDFSRTLAERLVIDIEKVM 441 (502)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 18887633 5678999999988765
No 221
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=96.92 E-value=0.0012 Score=65.72 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=83.3
Q ss_pred HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc------cc-cccc
Q psy16707 7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI------TD-QIGM 79 (420)
Q Consensus 7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i------~~-Q~Gm 79 (420)
+....+....+++..+...+...|.+. ..|...++.+++++...|+.|.+.|++.+ |..+ .. +.|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~ 372 (437)
T 3g0t_A 300 SSSALYALSSGATHSAQWGMAAMLKAC---NDGEYNFRDSVIEYGRKARIMKKMFLDNG----FNIVYDKDGNEPLADGF 372 (437)
T ss_dssp HTTHHHHHHSSSCHHHHHHHHHHHHHH---HTTSCCHHHHHHHHHHHHHHHHHHHHTTT----EEESSCEETTEECCSSS
T ss_pred HHHHHhhhcCCCCHHHHHHHHHHHhCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHcC----CEEeccccCCCCCceeE
Confidence 334444455677778888888888642 33555588899999999999999998872 5555 35 7888
Q ss_pred eeecC---CCHHHH-HHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHhh
Q psy16707 80 FCYTG---LNATQV-EKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 80 Fs~~g---L~~~qv-~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v 127 (420)
|.+.. .+.+++ +.|. +++|++.+.. ||+++.++..+|+.++++|.++
T Consensus 373 ~~~~~~~~~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~ 433 (437)
T 3g0t_A 373 YFTVGYKGMDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQML 433 (437)
T ss_dssp EEEEEETTCCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence 88764 455554 5565 5699886432 9999988999999999999875
No 222
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=96.88 E-value=0.0024 Score=62.01 Aligned_cols=107 Identities=6% Similarity=-0.013 Sum_probs=78.5
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG 84 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g 84 (420)
..+....+....++|..+...+...|.+. +.++.++++++..|+.|.+.|+ .|. ..+.|+|.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~------~~~--~~~~~~~~~~~ 315 (376)
T 3ezs_A 251 EKYKAFRAYLGYTSANAIQKASEAAWLDD-------RHAEFFRNIYANNLKLARKIFK------NTL--IYPYSFYVYLP 315 (376)
T ss_dssp HHHHHHHTTTCCCCCHHHHHHHHHHHHCS-------HHHHHHHHHHHHHHHHHHHHST------TCC--CCSBSSEEEEE
T ss_pred HHHHHHHhhhcCCCChHHHHHHHHHHhCc-------HHHHHHHHHHHHHHHHHHHHhc------CCC--CCCcceEEEEE
Confidence 34444444444566677777777777763 2368888999999999999886 244 56889999887
Q ss_pred CC--HHHHHHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 85 LN--ATQVEKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~--~~qv~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+. .+-++.|.++++|++.+ .+ ||++++ +.++++.++++|.++
T Consensus 316 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~ 371 (376)
T 3ezs_A 316 VQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETY 371 (376)
T ss_dssp CSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence 74 45567788779999853 12 788886 999999999998876
No 223
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=96.82 E-value=0.004 Score=62.19 Aligned_cols=118 Identities=13% Similarity=0.135 Sum_probs=80.0
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG-MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT 83 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~-m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~ 83 (420)
..+....+....+++..+..++...|.+.++ .+.+.. +++++...|..+.+.|++.-....|.....+.|+|.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~ 370 (444)
T 3if2_A 295 EAVSAMNAVVNLAPTRFGAAIATPLVANDRI----KQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWL 370 (444)
T ss_dssp HHHHHHHHHHHSSCCCHHHHHHHHHHHTSHH----HHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEE
T ss_pred HHHHHHHHhccCCCChHHHHHHHHHHHcCch----hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEE
Confidence 3444444544456677788888888887654 334443 66667777777777776532222466666788999876
Q ss_pred -----CCCHHHHHHHHHhcceEEcCC-----C-------------ceecccCCcCCHHHHHHHHHhh
Q psy16707 84 -----GLNATQVEKLIKEHSVYLTKD-----G-------------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 -----gL~~~qv~~L~~~~~IY~~~~-----G-------------Rinvagl~~~ni~~va~ai~~v 127 (420)
+++.+++...-.+++|++.+. | ||+++. +..+|+..+++|.++
T Consensus 371 ~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~ 436 (444)
T 3if2_A 371 WFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEV 436 (444)
T ss_dssp EETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHH
T ss_pred EcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence 567777665447889998631 1 889988 889999998888765
No 224
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=96.77 E-value=0.00072 Score=66.09 Aligned_cols=95 Identities=12% Similarity=-0.015 Sum_probs=71.3
Q ss_pred ceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707 162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL 241 (420)
Q Consensus 162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 241 (420)
.+|++.+. ++..+.+.++....... ..|.+..+..+|++++++++ |.+ .+
T Consensus 5 ~~~l~~~~-------~~~~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~~------------ 54 (373)
T 3frk_A 5 FASFKPMH-------DEIEYEIKFKFEEIYKR---NWFILGDEDKKFEQEFADYC-NVN-------YC------------ 54 (373)
T ss_dssp SCCCHHHH-------HHHHHHHHHHHHHHHHH---TCCSSSHHHHHHHHHHHHHH-TSS-------EE------------
T ss_pred ccCCCccc-------CCCCHHHHHHHHHHHHC---CCccCCchHHHHHHHHHHHh-CCC-------eE------------
Confidence 45565552 45667777777666543 24777889999999999986 322 22
Q ss_pred ccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 242 RVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.|||.|+.+++..+ .+.| ||+|++++|+|+.+...++..|++
T Consensus 55 ----------i~~~sgt~al~~~l~~l-~~~~-gd~Vi~~~~~~~~~~~~~~~~g~~ 99 (373)
T 3frk_A 55 ----------IGCGNGLDALHLILKGY-DIGF-GDEVIVPSNTFIATALAVSYTGAK 99 (373)
T ss_dssp ----------EEESCHHHHHHHHHHHT-TCCT-TCEEEEETTSCTHHHHHHHHHSCE
T ss_pred ----------EEeCCHHHHHHHHHHHc-CCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence 66899999999988644 2457 999999999999999999888875
No 225
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=96.77 E-value=0.0068 Score=58.28 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=73.0
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKL 93 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~qv~~L 93 (420)
.+++..+...+...|.+. +.++.++++++..|+.|.+.|++.+ |..+ ...|+|.+..+ +.+++...
T Consensus 242 ~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~ 309 (354)
T 3ly1_A 242 EKINFSGVDAALASMNDS-------AFITYSKKSNDVSRQILLKALEDLK----LPYL-PSEGNFVFHQLVVPLKDYQTH 309 (354)
T ss_dssp SCCCHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHHHHHHHHT----CCBC-CCCSSEEEEECSSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CeEC-CCCceEEEEECCCCHHHHHHH
Confidence 467778888888889864 3467788899999999999998873 4333 56788888777 45665443
Q ss_pred HHhcceEEc-----CCC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLT-----KDG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~-----~~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
-.+++|++. ..+ ||+++ ++.+++.++++|.++
T Consensus 310 l~~~gi~v~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~ 348 (354)
T 3ly1_A 310 MADAGVLIGRAFPPADNWCRISLG--TPQEMQWVADTMREF 348 (354)
T ss_dssp HHHTTEECCCCCTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred HHHCCEEEeecCCCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence 356899987 112 77766 788999999999876
No 226
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=96.75 E-value=0.0096 Score=60.55 Aligned_cols=68 Identities=6% Similarity=-0.182 Sum_probs=49.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC
Q psy16707 197 KEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK 276 (420)
Q Consensus 197 ~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd 276 (420)
.-|.|.....++++.+++ +|.+ +.+ +.|.|||.|+.+++..+ +.| ||
T Consensus 51 ~~~~~~~~~~~~~~~la~--~g~~------~~v----------------------~~~~G~t~a~~~~~~a~--~~~-gd 97 (446)
T 2x3l_A 51 DLHHPEEVILKSMKQVEK--HSDY------DGY----------------------FLVNGTTSGILSVIQSF--SQK-KG 97 (446)
T ss_dssp CTTSCSSHHHHHHHHHCS--CTTE------EEE----------------------EESSHHHHHHHHHHHTT--TTS-SS
T ss_pred cccCcchHHHHHHHHHHh--cCCC------ceE----------------------EEeCCHHHHHHHHHHHh--cCC-CC
Confidence 345566667788888887 5542 223 56899999999988644 457 99
Q ss_pred EEEEcCCCCCCcHHHHhhcCc
Q psy16707 277 VIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 277 ~VlvpdP~w~ny~~i~~~aG~ 297 (420)
.|++++|+|+.+...+..+|+
T Consensus 98 ~Vlv~~~~h~s~~~~~~~~G~ 118 (446)
T 2x3l_A 98 DILMARNVHKSVLHALDISQQ 118 (446)
T ss_dssp CEEECTTCCHHHHHHHHHHTC
T ss_pred EEEEecCccHHHHHHHHHcCC
Confidence 999999999988776655543
No 227
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=96.73 E-value=0.034 Score=56.06 Aligned_cols=44 Identities=14% Similarity=0.262 Sum_probs=35.1
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhh----cCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKH----TGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~----aG~~ 298 (420)
+.+.||+.|+.+++..+ +.| ||.|++++|+|+.+...++. .|++
T Consensus 100 ~~~~sG~~Ai~~al~~l--~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~ 147 (414)
T 3ndn_A 100 FATASGMAAVFTSLGAL--LGA-GDRLVAARSLFGSCFVVCSEILPRWGVQ 147 (414)
T ss_dssp EEESSHHHHHHHHHHTT--CCT-TCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred EEECCHHHHHHHHHHHH--hCC-CCEEEEcCCccchHHHHHHHHHHHcCcE
Confidence 56899999998877533 557 99999999999998877754 6664
No 228
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=96.73 E-value=0.0059 Score=58.20 Aligned_cols=100 Identities=12% Similarity=0.245 Sum_probs=72.1
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHH
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLI 94 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~ 94 (420)
+.+++..+...+...|.+.+. |. ...+++...|+.|.+.|++.+ |.....+.+++++...+.+++..+-
T Consensus 226 ~~~~~~~~~~a~~~~l~~~~~---~~----~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~l 294 (337)
T 3p1t_A 226 FCNVGTLDLHALEAALDNDRA---RE----AHIAKTLAQRRRVADALRGLG----YRVASSEANFVLVENAAGERTLRFL 294 (337)
T ss_dssp TTCSCHHHHHHHHHHHTCHHH---HH----HHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSEEEEECTTTHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCHHH---HH----HHHHHHHHHHHHHHHHHHHCc----CEECCCCCeEEEEEcCCHHHHHHHH
Confidence 345666777788888887432 22 334455667888888888763 5556667777777777777777666
Q ss_pred HhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707 95 KEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 95 ~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v 127 (420)
++++|++.+.+ ||+++ ++.++++++++|.++
T Consensus 295 ~~~gi~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~ 333 (337)
T 3p1t_A 295 RERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEY 333 (337)
T ss_dssp HHTTEECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHH
T ss_pred HHCCeEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHH
Confidence 78899987543 77876 678999999999886
No 229
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=96.71 E-value=0.0073 Score=59.35 Aligned_cols=103 Identities=17% Similarity=0.247 Sum_probs=75.0
Q ss_pred ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH-HHHH
Q psy16707 18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QVEK 92 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~-qv~~ 92 (420)
+|..+...+...|.+. .| +.++.++++++..|+.|.+.|++.- |+.|..+..+.|+|.+.-+ +.+ -+++
T Consensus 270 ~~~~~~~a~~~~l~~~----~~-~~~~~~~~~~~~~~~~l~~~L~~~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 343 (397)
T 2zyj_A 270 TPMLNQMLVHELLKEG----FS-ERLERVRRVYREKAQAMLHALDREV-PKEVRYTRPKGGMFVWMELPKGLSAEGLFRR 343 (397)
T ss_dssp CCHHHHHHHHHHHTTT----HH-HHHHHHHHHHHHHHHHHHHHHHHHS-CTTSEECCCSBSSEEEEECSTTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhC----CH-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEccCCccEEEEEEcCCCCCHHHHHHH
Confidence 4556677788888864 45 6788889999999999999998742 2225555567789887644 344 4566
Q ss_pred HHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 93 LIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 93 L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
|.++ +|++.+ .+ ||+++..+..+++.++++|.++
T Consensus 344 l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 389 (397)
T 2zyj_A 344 ALEE-NVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRA 389 (397)
T ss_dssp HHHT-TEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred HHHC-CCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 7655 999863 23 8999888888999999888765
No 230
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=96.69 E-value=0.0019 Score=62.76 Aligned_cols=107 Identities=9% Similarity=0.058 Sum_probs=77.7
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCC
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLN 86 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~ 86 (420)
+....+++..+...+...|.+. .+.++.++++++..|+.|.+.|++.-. .|..+..+.|+|.+. +.+
T Consensus 251 ~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 322 (377)
T 3fdb_A 251 PVIKDGASTLGLIAAEAAYRYG------TDFLNQEVAYLKNNHDFLLHEIPKRIP--GAKITPMQATYLMWIDFRDTTIE 322 (377)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHHHHST--TCEECCCSBCSEEEEECTTSCCC
T ss_pred HhhcCCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHhhCC--CceEecCCeeEEEEEECcccCCC
Confidence 3334566667777766666532 244677889999999999999987421 367777888988655 345
Q ss_pred HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 87 ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 87 ~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.+.++.|.++++|++.+. + ||+++. +..+++..+++|.++
T Consensus 323 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~ 372 (377)
T 3fdb_A 323 GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKA 372 (377)
T ss_dssp SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHH
Confidence 567888989999998642 2 788885 788888888888775
No 231
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=96.69 E-value=0.0092 Score=58.27 Aligned_cols=113 Identities=16% Similarity=0.195 Sum_probs=79.0
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++........++|..+...+...|.+. ..| +.++.++++++..|+.|.+.|++.+ |..+..+.|+|.+.-+
T Consensus 254 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 325 (389)
T 1gd9_A 254 RMVKFQMYNATCPVTFIQYAAAKALKDE---RSW-KAVEEMRKEYDRRRKLVWKRLNEMG----LPTVKPKGAFYIFPRI 325 (389)
T ss_dssp HHHHHHTTTTCSCCHHHHHHHHHHHTCH---HHH-HHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCBTTEECCBC
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHHhCC---Ccc-hHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEec
Confidence 3444444444566777777778888763 222 3577888999999999999998863 5555667788876544
Q ss_pred -----CHHH-HHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 -----NATQ-VEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 -----~~~q-v~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.++ ++.|.++++|++.+. + ||+++. +..+++...++|.++
T Consensus 326 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~ 382 (389)
T 1gd9_A 326 RDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERV 382 (389)
T ss_dssp GGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 4544 466777899998642 2 889886 778888888877765
No 232
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=96.64 E-value=0.0068 Score=58.65 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=72.9
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKL 93 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~qv~~L 93 (420)
+++..+...+...|.+. +.++.++++++..|+.|.+.|++.+ +. +....|+|.+..+ +.+++...
T Consensus 257 ~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~ 324 (365)
T 3get_A 257 NVSNLALKAAVAAMDDD-------EFTEKTLENNFSQMELYKEFAKKHN----IK-IIDSYTNFITYFFDEKNSTDLSEK 324 (365)
T ss_dssp CSCHHHHHHHHHHHTCH-------HHHHHHHHHHHHHHHHHHHHHHHTT----CE-ECCCSSSEEEEECSSSCHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHhCC----CE-ECCCCCeEEEEECCCCCHHHHHHH
Confidence 47778888888888863 4467788899999999999998873 33 2456678877666 45555443
Q ss_pred HHhcceEEcCCC-------ceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTKDG-------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~~G-------Rinvagl~~~ni~~va~ai~~v 127 (420)
-.+++|++.+.+ ||+++ ++.++++++++|.++
T Consensus 325 l~~~gi~v~~g~~~~~~~iRis~~--~~~~i~~l~~~l~~~ 363 (365)
T 3get_A 325 LLKKGIIIRNLKSYGLNAIRITIG--TSYENEKFFTEFDKI 363 (365)
T ss_dssp HHTTTEECEECGGGTCSEEEEECC--CHHHHHHHHHHHHHH
T ss_pred HHHCCEEEEECccCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence 345799987654 88887 789999999999875
No 233
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=96.64 E-value=0.0043 Score=61.28 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=69.7
Q ss_pred ccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC--C--CCceEEecC--
Q psy16707 305 FYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT--D--QIGMFCYTG-- 375 (420)
Q Consensus 305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~--~--q~GmF~~~~-- 375 (420)
.+++++..++..+...| + ...++ ++.++++++++|+.+.+.|+++ | +.... + +.++|.|+.
T Consensus 271 ~~~t~~~~~~~a~~~al-----~-~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~ 340 (398)
T 2fyf_A 271 TYNTPAIATLALLAEQI-----D-WLVGNGGLDWAVKRTADSSQRLYSWAQERPY----TTPFVTDPGLRSQVVGTIDFV 340 (398)
T ss_dssp CSSCCCHHHHHHHHHHH-----H-HHHHHTSHHHHHHHHHHHHHHHHHHHHHSTT----EEESCCSGGGBCSSEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHH-----H-HHHHccCHHHHHHHHHHHHHHHHHHHHHcCC----ceeccCChhhcCCcEEEEECC
Confidence 34566666655444433 1 22233 7788899999999999999987 4 44442 2 356566643
Q ss_pred --CCHH-HHHHHHHhCCeEEeCC------C--cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 376 --LNAT-QVEKLIKEHSVYLTKD------G--RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 376 --l~~~-~v~~Ll~e~~Vy~~p~------g--Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
.+.+ .++.|. +.||.+.++ + |||+.. .+.++++++.++|.+++
T Consensus 341 ~~~~~~~l~~~L~-~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l 395 (398)
T 2fyf_A 341 DDVDAGTVAKILR-ANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVV 395 (398)
T ss_dssp TTSCHHHHHHHHH-HTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHH-HCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 3444 456665 559999763 2 999874 47889999999998875
No 234
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=96.62 E-value=0.038 Score=57.22 Aligned_cols=93 Identities=11% Similarity=-0.051 Sum_probs=65.4
Q ss_pred CchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCccccccccccceeec
Q psy16707 178 YVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQG 254 (420)
Q Consensus 178 ~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt 254 (420)
..+..+.++.....+ .....|....|..++.+++++|+ +|.+. .+..+ +.|
T Consensus 107 ~~~~~~~e~l~~~~~-~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~---~~~~~----------------------~~t 160 (511)
T 3vp6_A 107 DIIGLAGEWLTSTAN-TNMFTYEIAPVFVLMEQITLKKMREIVGWSS---KDGDG----------------------IFS 160 (511)
T ss_dssp CHHHHHHHHHHHHHC-CCSSCTTTCHHHHHHHHHHHHHHHHHHTCCS---SSCEE----------------------EEE
T ss_pred cHHHHHHHHHHHHhc-cCCCCcccCchHHHHHHHHHHHHHHHhCCCC---CCCce----------------------EEC
Confidence 344455566665554 35678888889999999998887 55431 11222 679
Q ss_pred ccchHHHHHHHHHHHhc------------CCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707 255 ISGTGSLRVGAAFLKNF------------FPGEKVIYVPTPTWGNHIPICKHTGL 297 (420)
Q Consensus 255 ~gGtgal~~~~~~l~~~------------~p~gd~VlvpdP~w~ny~~i~~~aG~ 297 (420)
.|||.|...++..+... .| ++.|++++++++++...++.+|+
T Consensus 161 ~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~-~~~v~~s~~~H~s~~~~~~~~g~ 214 (511)
T 3vp6_A 161 PGGAISNMYSIMAARYKYFPEVKTKGMAAVP-KLVLFTSEQSHYSIKKAGAALGF 214 (511)
T ss_dssp SSHHHHHHHHHHHHHHHHCTHHHHHCGGGSC-CEEEEEETTSCTHHHHHHHHTTS
T ss_pred CchHHHHHHHHHHHHHHhhhhhhhcCcccCC-CeEEEECCCchHHHHHHHHHcCC
Confidence 99999987766544321 14 67999999999999999888887
No 235
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=96.55 E-value=0.0031 Score=62.00 Aligned_cols=90 Identities=19% Similarity=0.101 Sum_probs=67.5
Q ss_pred CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeec
Q psy16707 175 GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQG 254 (420)
Q Consensus 175 g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt 254 (420)
+.+...+.|.+|......+ ..|.+..+..+|++++++++ |.. .+ +.+
T Consensus 9 ~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~~----------------------i~~ 55 (390)
T 3b8x_A 9 ASSTWDDLEYKAIQSVLDS---KMFTMGEYVKQYETQFAKTF-GSK-------YA----------------------VMV 55 (390)
T ss_dssp CCCCCCHHHHHHHHHHHHH---TCCSSCHHHHHHHHHHHHHH-TCS-------EE----------------------EEE
T ss_pred CCCCCCHHHHHHHHHHHHc---CCCCCChHHHHHHHHHHHHH-CCC-------cE----------------------EEE
Confidence 3466777777777666543 24667788999999999987 322 11 568
Q ss_pred ccchHHHHHHHHHHH-----hcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 255 ISGTGSLRVGAAFLK-----NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 255 ~gGtgal~~~~~~l~-----~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.+||.|+.+++..+. .+.| ||.|++++|+|+.+...++..|++
T Consensus 56 ~sGt~a~~~al~~~~~~~~~~~~~-g~~Vi~~~~~~~~~~~~~~~~g~~ 103 (390)
T 3b8x_A 56 SSGSTANLLMIAALFFTKKPRLKK-GDEIIVPAVSWSTTYYPLQQYGLR 103 (390)
T ss_dssp SCHHHHHHHHHHHTTSSSSCSCCT-TCEEEEESSSCHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHhhhhcCCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence 899999988876441 1456 899999999999999988888875
No 236
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=96.55 E-value=0.001 Score=67.12 Aligned_cols=121 Identities=10% Similarity=0.050 Sum_probs=75.5
Q ss_pred ccccCCChHHHHHHHH--HccCCCCceeeccc-ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707 139 TSSVKVPSSNLLTEAF--KKDTNVNKINLGVG-AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL 215 (420)
Q Consensus 139 ~~~~~~d~i~~l~~~~--~~d~~~~kInL~iG-~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~ 215 (420)
+..+.+.+++...+.. .+..+.+.++++.| .|.|-....++ +.|.+|....... ....|.+..|..+|+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~-~~~~y~~~~~~~~l~~~la~~ 86 (467)
T 2oqx_A 9 IRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMR-GDEAYSGSRSYYALAESVKNI 86 (467)
T ss_dssp CCCCCCCCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTS-CCCCSSSCHHHHHHHHHHHHH
T ss_pred eeeecccccccHHHHHHHHHHcCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhcc-CcceeccCchhHHHHHHHHHH
Confidence 4455555543333222 22345678999998 46665555555 6666666655432 345798888999999999998
Q ss_pred HcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC----C----CEEEEcCCCCCC
Q psy16707 216 AYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG----E----KVIYVPTPTWGN 287 (420)
Q Consensus 216 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~----g----d~VlvpdP~w~n 287 (420)
+ |.+ .+ +.|.|||.|+.+++..+.. |. | |.|+++.+.|++
T Consensus 87 ~-~~~-------~v----------------------~~t~~gt~A~~~al~~~~~--~~~~~~G~~~~d~Ii~~~~h~~t 134 (467)
T 2oqx_A 87 F-GYQ-------YT----------------------IPTHQGRGAEQIYIPVLIK--KREQEKGLDRSKMVAFSNYFFDT 134 (467)
T ss_dssp H-CCS-------EE----------------------EEEC--CCSHHHHHHHHHH--HHHHHHCCCTTTCEEEESSCCHH
T ss_pred h-CcC-------cE----------------------EEcCCcHHHHHHHHHHHhc--cccccCCCCccceEEeccccccc
Confidence 7 432 23 5699999999888876543 21 4 778887666555
Q ss_pred cHHHHh
Q psy16707 288 HIPICK 293 (420)
Q Consensus 288 y~~i~~ 293 (420)
|.....
T Consensus 135 ~~~~~~ 140 (467)
T 2oqx_A 135 TQGHSQ 140 (467)
T ss_dssp HHHHHH
T ss_pred chhhhh
Confidence 544443
No 237
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=96.55 E-value=0.0095 Score=59.07 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=76.4
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.+....+....+++..+...+...|.+. ..| ++.++++++..|+.|.+.|++.+ |..+..+.|||.+.-+
T Consensus 274 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~ 343 (404)
T 2o1b_A 274 ALKKYQTHTNAGMFGALQDAAIYALNHY---DDF---LEEQSNVFKTRRDRFEAMLAKAD----LPFVHAKGGIYVWLET 343 (404)
T ss_dssp HHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHH---HHHHHHHHHHHHHHHHHHHHHTT----CCEECCCBSSEEEEEC
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHhcC---HHH---HHHHHHHHHHHHHHHHHHHHhcC----CeecCCCcceEEEEeC
Confidence 3444444433456666666666666542 334 66778899999999999998862 5555667898776543
Q ss_pred ----CHHH-HHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 ----NATQ-VEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ----~~~q-v~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.++ +++|.++++|++.+ .+ ||+++. +..+++...++|.++
T Consensus 344 ~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~ 399 (404)
T 2o1b_A 344 PPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTEL 399 (404)
T ss_dssp CTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGG
T ss_pred CCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence 4455 56677788999864 23 889887 788888888888765
No 238
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=96.51 E-value=0.0096 Score=60.39 Aligned_cols=106 Identities=13% Similarity=0.165 Sum_probs=77.4
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH-HH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QV 90 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~-qv 90 (420)
.+++..+..++...|.+. .|.+.++.++++++..|..|.+.|++.-. +.+..+..+.|||.+.-+ +.+ -+
T Consensus 319 ~~~~~~~q~a~~~~L~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~g~~~~~p~~g~~~~v~~~~~~~~~~l~ 393 (448)
T 3aow_A 319 LCTNVFGQVVAWRYVDGG----YLEKHIPEIRKFYKPRRDAMLEALEEFMP-EGVKWTKPEGGMFIWVTLPDGIDSKKML 393 (448)
T ss_dssp SSCCHHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTCEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCCccEEEEEEcCCCCCHHHHH
Confidence 345667777888888764 46777888999999999999999987522 125555567799988755 344 45
Q ss_pred HHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 91 EKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 91 ~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
++|.++ +|++.+ .+ ||+++..+..+|+..+++|.++
T Consensus 394 ~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~ 441 (448)
T 3aow_A 394 ERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAET 441 (448)
T ss_dssp HHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHH
T ss_pred HHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 667666 898753 23 8898887888999988888765
No 239
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=96.51 E-value=0.022 Score=55.46 Aligned_cols=104 Identities=14% Similarity=0.173 Sum_probs=70.1
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---ccc-ceeec---CC
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIG-MFCYT---GL 85 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~-el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~G-mFs~~---gL 85 (420)
.+++||..+...+...|. .+.+ .++.+++|++.+|+.|.+.|++.+ +..+.. +.+ ++++. |+
T Consensus 257 ~~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 2huf_A 257 YHHTISSTLLYGLREAIA------MACEEGLPALIARHEDCAKRLYRGLQDAG----FELYADPKDRLSTVTTIKVPQGV 326 (393)
T ss_dssp CSCCCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCTTEEEEECCTTC
T ss_pred CCCCCCHHHHHHHHHHHH------HHHHhCHHHHHHHHHHHHHHHHHHHHHcC----CeeccCccccCCcEEEEEcCCCC
Confidence 345677776665554552 1222 388899999999999999998863 333322 234 55442 56
Q ss_pred CHHHH-HHHHHhcceEEcCC--------CceecccC--CcCCHHHHHHHHHhh
Q psy16707 86 NATQV-EKLIKEHSVYLTKD--------GRISMAGV--TSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~~qv-~~L~~~~~IY~~~~--------GRinvagl--~~~ni~~va~ai~~v 127 (420)
+.+++ +.|.++++|++... -||++.+. +..++++++++|.++
T Consensus 327 ~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~ 379 (393)
T 2huf_A 327 DWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEA 379 (393)
T ss_dssp CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHH
Confidence 77666 46777889998642 27888674 466799999999876
No 240
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=96.49 E-value=0.011 Score=57.26 Aligned_cols=105 Identities=7% Similarity=0.101 Sum_probs=76.6
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHH
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNAT 88 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~ 88 (420)
.+++++..+...+...|.+. .+| ++.++++++..|+.|.+.|++.-. .+..+..+.|||.+. |.+.+
T Consensus 261 ~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (383)
T 3kax_A 261 GFHGLNIFAYTAMQSAYTEC---NDW---LNEIRFYIEDNAKFACEYIKDHIP--TLSVMKPEGSFLLWIDCSALNLSQD 332 (383)
T ss_dssp TCCCCCHHHHHHHHHHTTTC---HHH---HHHHHHHHHHHHHHHHHHHHHHCT--TCEECCCSBSSEEEEECGGGCCCHH
T ss_pred ccCCCCHHHHHHHHHHHHhh---HHH---HHHHHHHHHHHHHHHHHHHHhhCC--CceEecCCceEEEEEEccccCCCHH
Confidence 35578888888888888763 344 667788999999999999987421 266667788888754 34555
Q ss_pred H-HHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 89 Q-VEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 q-v~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+ ++.|.++++|++.+. + ||+++ .+..+++..+++|.++
T Consensus 333 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~-~~~~~i~~~l~~l~~~ 381 (383)
T 3kax_A 333 ERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG-CPRSVLEEILNRLRHT 381 (383)
T ss_dssp HHHHHHHHTSCEECEESGGGCTTCTTEEEEECS-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc-CCHHHHHHHHHHHHHH
Confidence 5 456777899998642 1 88988 4788899888888765
No 241
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=96.48 E-value=0.0062 Score=59.91 Aligned_cols=108 Identities=16% Similarity=0.159 Sum_probs=75.8
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++...+....++|..+...+...|.+. ++.+++++...|+.|.+.|++.+ |..+..+.|+|.+.-+
T Consensus 267 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~---------~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 333 (389)
T 1o4s_A 267 AVSKIQSHTTSCINTVAQYAALKALEVD---------NSYMVQTFKERKNFVVERLKKMG----VKFVEPEGAFYLFFKV 333 (389)
T ss_dssp HHHHHHHHHTCSCCHHHHHHHHHHTTCC---------CHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSBSSEEEEEC
T ss_pred HHHHHhhhcccCCCHHHHHHHHHHHhcc---------HHHHHHHHHHHHHHHHHHHHhcC----CeeecCCcceEEEEeC
Confidence 3444444444455666777777778763 67778888999999999998862 5555567788887655
Q ss_pred --CHHHH-HHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 --NATQV-EKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 --~~~qv-~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.+++ ++|.++++|++.+. | ||+++. +..+++...++|.++
T Consensus 334 ~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-~~~~l~~~l~~l~~~ 385 (389)
T 1o4s_A 334 RGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEALDRIEDF 385 (389)
T ss_dssp SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence 45544 56777889998643 2 889885 777788887777664
No 242
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=96.48 E-value=0.01 Score=57.38 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=74.8
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVEKLIK 95 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv~~L~~ 95 (420)
+++..+...+...|.+ .+| ++.+++++...|+.|.+.|++. | .|. +....|+|.+..+ +.+++...-.
T Consensus 256 ~~~~~~~~a~~~~l~~----~~~---~~~~~~~~~~~~~~l~~~l~~~--~-g~~-~~~~~~~~~~~~~~~~~~l~~~l~ 324 (367)
T 3euc_A 256 NVNVLTEATALFALEH----VAV---LDEQAAQLRAERSRVAEGMAAH--G-GVT-VFPSAANFLLARVPDAAQTFDRLL 324 (367)
T ss_dssp CCCHHHHHHHHHHHTT----HHH---HHHHHHHHHHHHHHHHHHHHTS--T-TCE-ECCCSSSEEEEECSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcC----HHH---HHHHHHHHHHHHHHHHHHHHhC--C-CcE-ECCCCCeEEEEECCCHHHHHHHHH
Confidence 4677778888888887 334 6677889999999999999875 2 255 5667888888777 4555554447
Q ss_pred hcceEEcCCC----------ceecccCCcCCHHHHHHHHHhhC
Q psy16707 96 EHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 96 ~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v~ 128 (420)
+++|++...+ ||+++ ++.++++++++|.++-
T Consensus 325 ~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 325 ARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASL 365 (367)
T ss_dssp TTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred HCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHh
Confidence 7899986432 88877 8899999999998863
No 243
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=96.46 E-value=0.014 Score=57.16 Aligned_cols=112 Identities=13% Similarity=0.152 Sum_probs=79.6
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT- 83 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~- 83 (420)
..+....+....++|..+...+...|.+ .+.++.++++++..|+.|.+.|++.+.. ..+..+.|+|.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~~~ 319 (391)
T 3h14_A 250 RVVERIAQNMFICAPHASQVAALAALDC-------DAELQANLDVYKANRKLMLERLPKAGFT---RIAPPDGAFYVYAD 319 (391)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHHHHHHHHHTCC---CBCCCCBTTEEEEE
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHhCC-------hHHHHHHHHHHHHHHHHHHHHHHHcCCC---cccCCCeeEEEEEe
Confidence 4555666666677888887777777763 2456778899999999999999887421 2234566788776
Q ss_pred ----CCCHHHH-HHHHHhcceEEcC-----------CCceecccCCcCCHHHHHHHHHhh
Q psy16707 84 ----GLNATQV-EKLIKEHSVYLTK-----------DGRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 ----gL~~~qv-~~L~~~~~IY~~~-----------~GRinvagl~~~ni~~va~ai~~v 127 (420)
+.+.+++ ++|.++++|++.+ .=||+++. +...++...++|.++
T Consensus 320 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~ 378 (391)
T 3h14_A 320 VSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAF 378 (391)
T ss_dssp CTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred cCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 4556555 6777888999853 12678777 777888888877765
No 244
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=96.45 E-value=0.028 Score=55.68 Aligned_cols=88 Identities=14% Similarity=0.243 Sum_probs=56.0
Q ss_pred CchHHHHHHHHHHHccCCCCCCCC--CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecc
Q psy16707 178 YVLPSVKQADEIVLNKNLDKEYAP--IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGI 255 (420)
Q Consensus 178 ~~~~~V~~a~~~~~~~~~~~~Y~p--~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~ 255 (420)
+.++...++..........+.|.. .....+|++++++++ |.+ .+ +.+.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-g~~-------~~----------------------i~~~ 81 (389)
T 3acz_A 32 FCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIE-GAA-------GS----------------------AAFG 81 (389)
T ss_dssp BCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHH-TCS-------EE----------------------EEES
T ss_pred eecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHh-CCC-------eE----------------------EEeC
Confidence 344444444333322223455654 334568999999876 322 11 5678
Q ss_pred cchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707 256 SGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE 298 (420)
Q Consensus 256 gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~ 298 (420)
+|+.|+..++..+ +.| ||.|++++|+|+.+... ++..|++
T Consensus 82 sG~~ai~~~~~~~--~~~-gd~vl~~~~~y~~~~~~~~~~~~~~g~~ 125 (389)
T 3acz_A 82 SGMGAISSSTLAF--LQK-GDHLIAGDTLYGCTVSLFTHWLPRFGIE 125 (389)
T ss_dssp SHHHHHHHHHTTT--CCT-TCEEEEESSCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHH--hCC-CCEEEEeCCCchHHHHHHHHHHHHcCCE
Confidence 8999998887533 457 89999999999976655 4556664
No 245
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=96.45 E-value=0.01 Score=57.69 Aligned_cols=112 Identities=20% Similarity=0.225 Sum_probs=76.8
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++........+++..+...+...|.+.. .+.++.++++++..|+.|.+.|++.+ |..+..+.|+|.+.-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 313 (370)
T 2z61_A 243 AILKLQQNLFISAPTISQYAALKAFEKET-----EREINSMIKEFDRRRRLVLKYVKDFG----WEVNNPIGAYYVFPNI 313 (370)
T ss_dssp HHHHHHHHHTSSSCHHHHHHHGGGGSHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCBTTEECCBC
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHhccC-----HHHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCcceEEEEec
Confidence 34444444444566666666666665311 23467788899999999999998762 5555667799888766
Q ss_pred C--HHH-HHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 N--ATQ-VEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~--~~q-v~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
. .++ ++.|.++++|++.+ .+ ||+++ .+..+++..+++|.++
T Consensus 314 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~ 367 (370)
T 2z61_A 314 GEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEF 367 (370)
T ss_dssp SSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHH
Confidence 3 444 56677788999864 23 88988 6788888888887764
No 246
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=96.44 E-value=0.0094 Score=59.50 Aligned_cols=120 Identities=11% Similarity=0.130 Sum_probs=81.6
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.+....+....++|..+...+...|.+. ....|.+.++.|+++++..|..|.+.|++.- ++-+.....+.|+|.+.-+
T Consensus 283 ~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~p~~g~~~~~~~ 360 (425)
T 2r2n_A 283 RVILHIQVSTLHPSTFNQLMISQLLHEW-GEEGFMAHVDRVIDFYSNQKDAILAAADKWL-TGLAEWHVPAAGMFLWIKV 360 (425)
T ss_dssp HHHHHHHTTTCSSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEECCCSBSSEEEEEE
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEeCCCceEEEEEEe
Confidence 3444444444566777777777777641 1235677889999999999999999998742 2222334568899987654
Q ss_pred C----HHH-HHHHHHhcceEEcC-----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 N----ATQ-VEKLIKEHSVYLTK-----------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~----~~q-v~~L~~~~~IY~~~-----------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
. .++ +..+-.+++|++.+ .+ |||++..+..+++..+++|.++
T Consensus 361 ~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 420 (425)
T 2r2n_A 361 KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQL 420 (425)
T ss_dssp TTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3 334 33333578998853 23 8898877889999999888765
No 247
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=96.44 E-value=0.0047 Score=60.29 Aligned_cols=114 Identities=15% Similarity=0.048 Sum_probs=78.1
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
.++........+++..+...+...|... .|.+.++.++++++..|+.|.+.|++.+ |..+..+.|+|.+..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 314 (381)
T 1v2d_A 243 RLAGMRQWTSFSAPTPLQAGVAEALKLA----RREGFYEALREGYRRRRDLLAGGLRAMG----LRVYVPEGTYFLMAEL 314 (381)
T ss_dssp HHHHHHHHHTSSCCHHHHHHHHHHHHHH----HHTTHHHHHHHHHHHHHHHHHHHHHHTT----CCEECCSBSSEEEEEC
T ss_pred HHHHHHhhcccCCCcHHHHHHHHHHhCc----ccHHHHHHHHHHHHHHHHHHHHHHHHCC----CEecCCCcceEEEEec
Confidence 3443333333445555555555555422 2344577788999999999999998843 5556667788887766
Q ss_pred CHHHHHHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhhC
Q psy16707 86 NATQVEKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 86 ~~~qv~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v~ 128 (420)
.+.++..+-++++|++.+ .+ ||+++. +..+++.++++|.++-
T Consensus 315 ~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l 368 (381)
T 1v2d_A 315 PGWDAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVV 368 (381)
T ss_dssp TTCCHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC
T ss_pred ChHhHHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 432377777889999853 23 889887 8889999999998873
No 248
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=96.39 E-value=0.018 Score=56.98 Aligned_cols=110 Identities=9% Similarity=0.143 Sum_probs=77.7
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-ccccccceeecC
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTG 84 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~-i~~Q~GmFs~~g 84 (420)
.++...+... +++..+...+...|... ..| ++.+++++...|+.|.+.|++.+ |.. +..+.|+|.+..
T Consensus 266 ~l~~~~~~~~-~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 334 (409)
T 2gb3_A 266 HAMKLAQGRL-APPLLEQIGSVGLLNLD---DSF---FDFVRETYRERVETVLKKLEEHG----LKRFTKPSGAFYITAE 334 (409)
T ss_dssp HHHHHHHHSC-CCCHHHHHHHHHHHTCC---HHH---HHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCSBSSEEEEE
T ss_pred HHHHHHhccC-CCCHHHHHHHHHHHhcc---HHH---HHHHHHHHHHHHHHHHHHHHHcC----ceeeeCCCeeEEEEEE
Confidence 3444444444 67777777788888652 334 56678888999999999998862 555 556779998764
Q ss_pred C---CHHHH-HHHHHh-----cceEEcC-----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 85 L---NATQV-EKLIKE-----HSVYLTK-----------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L---~~~qv-~~L~~~-----~~IY~~~-----------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+ +.+++ ++|.++ ++|++.+ .+ ||+++ .+..+++.++++|.++
T Consensus 335 ~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~ 398 (409)
T 2gb3_A 335 LPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAIDVLMEG 398 (409)
T ss_dssp CSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHH
Confidence 4 45544 678777 6999853 22 78888 8888899999888776
No 249
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=96.30 E-value=0.012 Score=58.00 Aligned_cols=110 Identities=12% Similarity=0.104 Sum_probs=75.7
Q ss_pred HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---
Q psy16707 7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--- 83 (420)
Q Consensus 7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--- 83 (420)
++...+.. .++|..+...+...|.+. .+| ++.++++++..|+.|.+.|++. + .|..+..+.|+|.+.
T Consensus 273 l~~~~~~~-~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~--~-~~~~~~~~~~~~~~~~~~ 342 (406)
T 1xi9_A 273 IDRLARIR-LCPNTPAQFAAIAGLTGP---MDY---LKEYMKKLKERRDYIYKRLNEI--P-GISTTKPQGAFYIFPKIE 342 (406)
T ss_dssp HHHHHHHT-CCSCSHHHHHHHHHHHSC---CHH---HHHHHHHHHHHHHHHHHHHHTS--T-TEECCCCCBSSEECCEEC
T ss_pred HHHHHHhh-cCCCHHHHHHHHHHHhCC---cHH---HHHHHHHHHHHHHHHHHHHHhC--C-CCeeecCCeeEEEEEecC
Confidence 33333333 456666677777777421 234 6778899999999999999875 2 355566677998874
Q ss_pred ---CCCHHHH-HHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 84 ---GLNATQV-EKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 ---gL~~~qv-~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
|.+.+++ ++|.++++|++.+. + ||+++ .+..+|+...++|.++
T Consensus 343 ~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~~~l~~~ 399 (406)
T 1xi9_A 343 VGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAMDRFEKF 399 (406)
T ss_dssp SCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence 4455555 56777889988532 2 88987 8888888888887765
No 250
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=96.29 E-value=0.024 Score=54.84 Aligned_cols=99 Identities=16% Similarity=0.213 Sum_probs=72.9
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---CCCHHHHHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---GLNATQVEK 92 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---gL~~~qv~~ 92 (420)
.+++..+...+...|.+. +| ++.++++++..|+.|.+.|++.+ |.. ....|+|.+. +.+.+++..
T Consensus 243 ~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~~----~~~-~~~~~~~~~~~~~~~~~~~l~~ 310 (360)
T 3hdo_A 243 YNLDRLAQAACVAALRDQ----AY---LSECCRRIRETREWFTTELRSIG----YDV-IPSQGNYLFATPPDRDGKRVYD 310 (360)
T ss_dssp CCSCHHHHHHHHHHHHCH----HH---HHHHHHHHHHHHHHHHHHHHHTT----CEE-CCCSSSEEEEECTTCCHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCH----HH---HHHHHHHHHHHHHHHHHHHHHCC----CEE-cCCCccEEEEECCCCCHHHHHH
Confidence 356667777878888762 34 66788899999999999998863 433 3456666554 456677655
Q ss_pred HHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhhC
Q psy16707 93 LIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 93 L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v~ 128 (420)
.-.+++|++.+.+ ||+++ ++.++|++.+++.++.
T Consensus 311 ~l~~~gi~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~ 352 (360)
T 3hdo_A 311 GLYARKVLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIG 352 (360)
T ss_dssp HHHHTTEECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 4467899987644 88887 8899999999999883
No 251
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=96.25 E-value=0.021 Score=55.55 Aligned_cols=108 Identities=18% Similarity=0.166 Sum_probs=72.8
Q ss_pred HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-
Q psy16707 7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL- 85 (420)
Q Consensus 7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL- 85 (420)
++...+....+++..+...+...|.+. . +.++.++++++..|+.|.+.|++. |..+..+.|+|.+.-+
T Consensus 252 l~~~~~~~~~~~~~~~~~a~~~~l~~~---~---~~~~~~~~~~~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~ 320 (376)
T 2dou_A 252 LERVKGVIDFNQYAGVLRMGVEALKTP---K---EVVRGYARVYRERALGMAEALKGV-----LSLLPPRATMYLWGRLP 320 (376)
T ss_dssp HHHHHHHHCCCSCHHHHHHHHHHHTSC---H---HHHHHHHHHHHHHHHHHHHHHTTT-----SEECCCCBSSEEEEECC
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHhCc---H---HHHHHHHHHHHHHHHHHHHHHHHh-----cCccCCCeeEEEEEECC
Confidence 333333333345556667777778762 2 346678889999999999999764 5555567788876544
Q ss_pred ---CHH-HHHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 ---NAT-QVEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ---~~~-qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.+ -++.|.++ +|++.+ .+ ||+++. +..+++...++|.++
T Consensus 321 ~~~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 321 EGVDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREA 374 (376)
T ss_dssp TTCCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 334 45677666 999863 23 889876 778888888887764
No 252
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=96.25 E-value=0.091 Score=53.80 Aligned_cols=84 Identities=14% Similarity=0.337 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCC-CCceEEec--CC---CHHHHHHHHHhCCeEEeCC---C----c
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITD-QIGMFCYT--GL---NATQVEKLIKEHSVYLTKD---G----R 397 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~-q~GmF~~~--~l---~~~~v~~Ll~e~~Vy~~p~---g----R 397 (420)
+-++.+.++..++++.+.+.|++. | ++.+.+ +.++++|. +. +.+..++|.++..+++.|. | |
T Consensus 369 ~g~~~~~~~~~~~a~~l~~~L~~~~g----~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR 444 (475)
T 3k40_A 369 ENLQAHIRRHCNFAKQFGDLCVADSR----FELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLR 444 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTT----EEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----EEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEE
Confidence 446677788889999999999987 4 554433 45565542 32 2355688888877777652 3 9
Q ss_pred EEEccc--CCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGV--TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl--~~~ni~~la~AI~~vv 419 (420)
|++++- +.++|+++.++|.++.
T Consensus 445 ~~~~~~~tt~~di~~~~~~i~~~~ 468 (475)
T 3k40_A 445 MAICSRFTQSEDMEYSWKEVSAAA 468 (475)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Confidence 998753 5678999999998764
No 253
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=96.23 E-value=0.015 Score=57.59 Aligned_cols=92 Identities=16% Similarity=0.081 Sum_probs=49.6
Q ss_pred CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCC---------CCCHHHHHHHHHHHcCCCCccccCCcee
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPI---------IGAPDFGKLAAQLAYGEDCPQLKDNLIS 230 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~---------~G~~~fr~a~~~~~~g~~~~~~~~~~i~ 230 (420)
.+++.|..+. ..++++.|.+|......+ ...|+.. ....++++++++++ |.+ ++.|
T Consensus 17 ~~~~~Ld~~~------~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~-----~~~v- 81 (432)
T 3a9z_A 17 NRKVYMDYNA------TTPLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI-GGK-----PQDI- 81 (432)
T ss_dssp -CCEECBTTT------CCCCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH-TCC-----GGGE-
T ss_pred CCcEEeeCCc------cCCCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc-CCC-----cCeE-
Confidence 3567777765 236677777777665532 2333321 12368999999976 432 3344
Q ss_pred eecccCCCCccccccccccceeecccchHHHHHHHHHHHh-c-----CCCCCEEEEcCCCCCCc
Q psy16707 231 IVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN-F-----FPGEKVIYVPTPTWGNH 288 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~-~-----~p~gd~VlvpdP~w~ny 288 (420)
+.|.|||.|+.+++..+.. + .| ||+|++++|+|+.|
T Consensus 82 ---------------------~~~~g~t~a~~~~~~~~~~~~~~~~~~~-gd~vl~~~p~y~~~ 123 (432)
T 3a9z_A 82 ---------------------IFTSGGTESNNLVIHSTVRCFHEQQTLQ-GRTVDQISPEEGTR 123 (432)
T ss_dssp ---------------------EEESCHHHHHHHHHHHHHHHHHHHHHHC-------------CC
T ss_pred ---------------------EEeCChHHHHHHHHHHHHhhhhhccccC-CccccccccccccC
Confidence 5699999999998865531 1 37 89999999999987
No 254
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=96.23 E-value=0.01 Score=59.10 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=75.1
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----CH
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA 87 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-----~~ 87 (420)
..+++++..+...+...|.+ ..+| ++.++++++.+|+.|.+.|++. + .+..+..+.+|+.+..+ +.
T Consensus 298 ~~~~~~n~~~~~a~~aal~~---~~~~---~~~~~~~~~~~~~~l~~~L~~~--~-~i~~~~~~~~~~~~v~~~~~~~~~ 368 (421)
T 3l8a_A 298 NNQHEVPTVGMIATQAAFQY---GKPW---LEELKTVIEGNIKLVIKELEAK--T-KIKVMEPEGTYLVWLDFSAYAIAQ 368 (421)
T ss_dssp TTCSCCCHHHHHHHHHHHHH---CHHH---HHHHHHHHHHHHHHHHHHHHHH--C-SCEEECCSBSSEEEEECGGGTCCT
T ss_pred cccCCCCHHHHHHHHHHHhc---cHHH---HHHHHHHHHHHHHHHHHHHHhC--C-CceEeCCCeeEEEEEeccccCCCH
Confidence 34556777777666666652 2455 5667788899999999999876 2 36666677777775543 33
Q ss_pred -HHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 88 -TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 -~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+-++.|.++++|++.+. + ||+++ .+..+|+...++|.++
T Consensus 369 ~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~i~~~l~~l~~~ 418 (421)
T 3l8a_A 369 PQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPKNTVQEALSRIISV 418 (421)
T ss_dssp THHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence 44667888999998642 2 89988 6888999999988876
No 255
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=96.21 E-value=0.17 Score=51.34 Aligned_cols=84 Identities=13% Similarity=0.321 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC-CCCceEEec--CC---CHHHHHHHHHhCCeEEeCC---C----c
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT-DQIGMFCYT--GL---NATQVEKLIKEHSVYLTKD---G----R 397 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~-~q~GmF~~~--~l---~~~~v~~Ll~e~~Vy~~p~---g----R 397 (420)
+.++.+.+++.++++.+.+.|++. | ++.+. ++.++++|. +. +.+..++|.++..+++.++ | |
T Consensus 372 ~g~~~~~~~~~~~a~~l~~~L~~~~~----~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lR 447 (486)
T 1js3_A 372 KGLQAYIRKHVQLSHEFEAFVLQDPR----FEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLR 447 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTT----EEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----eEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEE
Confidence 346667788888999999999886 3 55443 456677653 22 3455577766655655542 2 9
Q ss_pred EEEccc--CCCCHHHHHHHHHHHh
Q psy16707 398 ISMAGV--TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 is~agl--~~~ni~~la~AI~~vv 419 (420)
|++++. +.+.|+++.++|.+++
T Consensus 448 i~~~~~~~t~~di~~~~~~l~~~~ 471 (486)
T 1js3_A 448 FAICSRKVESGHVRLAWEHIRGLA 471 (486)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Confidence 998653 4568999999888764
No 256
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=96.17 E-value=0.0052 Score=62.09 Aligned_cols=122 Identities=7% Similarity=0.004 Sum_probs=83.4
Q ss_pred HHHHHHhhccCCCccchHHHHHHHHhCChhH-HH----HHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-------CCC--
Q psy16707 5 NAKKILIRAFYSSPPIHGARIVQEILGDPKL-KA----QWLTEVKGMADRIISMRQSLKDNLQKE-GS-------NKP-- 69 (420)
Q Consensus 5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L-~~----~W~~el~~m~~Ri~~~R~~l~~~L~~~-~~-------~~~-- 69 (420)
++|+.+....++++|.....++...|.+..- .. .|.+.++.++++++..|+.|.+.|++. +. +..
T Consensus 272 ~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 351 (427)
T 2hox_A 272 NNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCN 351 (427)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEET
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccc
Confidence 4555555556677787777778888875310 00 244578888999999999999999875 21 221
Q ss_pred -CccccccccceeecCCC---HHHHHHHHHhcceEEcC-------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 70 -WNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTK-------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 70 -w~~i~~Q~GmFs~~gL~---~~qv~~L~~~~~IY~~~-------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
|.....+.|+|.+..+. .+.++.|.++++|++.+ .| |||++. +..+++...+.|.++
T Consensus 352 ~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~~e~l~~~l~~l~~~ 421 (427)
T 2hox_A 352 YFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDM 421 (427)
T ss_dssp TTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHH
T ss_pred cccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-CHHHHHHHHHHHHHH
Confidence 55566778999998885 34567777788999864 34 788875 556666666666554
No 257
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=96.15 E-value=0.0072 Score=60.26 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=75.9
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCccccccccceeecCCC----H-HHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYTGLN----A-TQV 90 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~-~~w~~i~~Q~GmFs~~gL~----~-~qv 90 (420)
+++..+...+...|.+. .|.+.++.++++++..|+.|.+.|++.... ..|..+..+.|+|.+.-+. . +-+
T Consensus 291 ~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~ 366 (425)
T 1vp4_A 291 CSPAITHRLAARYLERY----DLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTWEMF 366 (425)
T ss_dssp SCCHHHHHHHHHHHHHS----CHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCTTTTH
T ss_pred CCCHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCCHHHHH
Confidence 44556677777777543 356678888999999999999999875221 1366566678988876553 3 346
Q ss_pred HHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 91 EKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 91 ~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.|.++ +|++.+ .+ ||+++..+..+++.++++|.++
T Consensus 367 ~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~ 414 (425)
T 1vp4_A 367 EYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREV 414 (425)
T ss_dssp HHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 677766 998853 23 8999887889999999888775
No 258
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=96.12 E-value=0.019 Score=56.02 Aligned_cols=112 Identities=12% Similarity=0.076 Sum_probs=74.4
Q ss_pred HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-
Q psy16707 6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG- 84 (420)
Q Consensus 6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g- 84 (420)
.++...+....++|..+...+...|... .+| ++.++++++..|+.|.+.|++. + .|..+..+.|+|.+..
T Consensus 258 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~~~~~~~~~~~~ 328 (388)
T 1j32_A 258 AATKIQGHSTSNVCTFAQYGAIAAYENS---QDC---VQEMLAAFAERRRYMLDALNAM--P-GLECPKPDGAFYMFPSI 328 (388)
T ss_dssp HHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHH---HHHHHHHHHHHHHHHHHHHHTC--T-TCBCCCCCBTTEECCBC
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHhCC---cHH---HHHHHHHHHHHHHHHHHHHhhC--C-CCcccCCCeeEEEEEec
Confidence 4444445444455556666666666432 233 5567889999999999999875 2 3565666778887763
Q ss_pred ----CCHHHH-HHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 85 ----LNATQV-EKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 ----L~~~qv-~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.+.+++ +.|.++++|++.+. + ||+++ .+..+++..+++|.++
T Consensus 329 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~i~~~~~~l~~~ 383 (388)
T 1j32_A 329 AKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA-TDLDTIKRGMERLEKF 383 (388)
T ss_dssp GGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec-CCHHHHHHHHHHHHHH
Confidence 455554 56777789998642 2 78886 6778888888877654
No 259
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=96.09 E-value=0.0091 Score=58.50 Aligned_cols=105 Identities=16% Similarity=0.178 Sum_probs=74.9
Q ss_pred HHHHhhcc-CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707 7 KKILIRAF-YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL 85 (420)
Q Consensus 7 l~~i~R~~-yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL 85 (420)
+....+.. +.++|......+...|.+.+ ++++++..|+.|.+.|++.+ |..+..+.|+|.+..+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----------~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 340 (398)
T 3ele_A 276 VCGAGRALGYVCAPSLFQKMIVKCQGATG-----------DINAYKENRDLLYEGLTRIG----YHCFKPDGAFYMFVKA 340 (398)
T ss_dssp HHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----------CHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEEC
T ss_pred HHHHhhhccccCCCHHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHcC----CeecCCCeeEEEEEEc
Confidence 33343433 56777788888888888764 35677778888888888763 5666678888776654
Q ss_pred ---CHHHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707 86 ---NATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ---~~~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v 127 (420)
+.+++...-.+++|++.+.. ||+++ .+..+|+...++|.++
T Consensus 341 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~ 392 (398)
T 3ele_A 341 LEDDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC-VDREMIKHSMPAFEKI 392 (398)
T ss_dssp SSSCHHHHHHHHHTTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCEEEeCccccCCCCeEEEEec-CCHHHHHHHHHHHHHH
Confidence 45665544468899986532 88985 7889999999888775
No 260
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=96.09 E-value=0.11 Score=51.58 Aligned_cols=70 Identities=14% Similarity=0.151 Sum_probs=49.7
Q ss_pred CCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707 196 DKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP 273 (420)
Q Consensus 196 ~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p 273 (420)
.|.|. +.....+|++.+++++ |.+ .+ +.+.|||.|+..++..+ +.|
T Consensus 57 ~~~y~r~~~~~~~~l~~~la~~~-g~~-------~~----------------------~~~~sGt~A~~~al~~~--~~~ 104 (392)
T 3qhx_A 57 GYEYARTGNPTRTALEAALAAVE-DAA-------FG----------------------RAFSSGMAAADCALRAM--LRP 104 (392)
T ss_dssp TBCBTTTCCHHHHHHHHHHHHHT-TCS-------EE----------------------EEESSHHHHHHHHHHHH--CCT
T ss_pred CccccCCCChHHHHHHHHHHHHh-CCC-------cE----------------------EEECCHHHHHHHHHHHH--hCC
Confidence 45565 3344567888888865 322 12 66899999999887644 457
Q ss_pred CCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 274 GEKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 274 ~gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
||.|++++|+|+.+...+ +..|++
T Consensus 105 -gd~Vi~~~~~y~~~~~~~~~~~~~~g~~ 132 (392)
T 3qhx_A 105 -GDHVVIPDDAYGGTFRLIDKVFTGWNVE 132 (392)
T ss_dssp -TCEEEEETTCCHHHHHHHHHTGGGGTCE
T ss_pred -CCEEEEeCCCcchHHHHHHHHHHhcCcE
Confidence 999999999999877666 445653
No 261
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=96.03 E-value=0.018 Score=56.07 Aligned_cols=104 Identities=18% Similarity=0.245 Sum_probs=74.5
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHH-
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQ- 89 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~q- 89 (420)
+..| +++..+...+...|.+.+. + .++.++++++..|+.|.+.|++.+ + +..+....|+|.+..+ +.++
T Consensus 240 ~~~~-~~~~~~~~a~~~~l~~~~~--~---~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~l 310 (356)
T 1fg7_A 240 IAPY-PLSTPVADIAAQALSPQGI--V---AMRERVAQIIAEREYLIAALKEIP--C-VEQVFDSETNYILARFKASSAV 310 (356)
T ss_dssp SCSS-CSCHHHHHHHHHHTSHHHH--H---HHHHHHHHHHHHHHHHHHHHHHST--T-EEEECCCSSSEEEEEETTHHHH
T ss_pred cCCC-CCCHHHHHHHHHHhcCccH--H---HHHHHHHHHHHHHHHHHHHHHhCC--C-ceEECCCCCeEEEEECCCHHHH
Confidence 4455 5666777888888876443 1 377888999999999999998864 1 2234456788877665 4444
Q ss_pred HHHHHHhcceEEcC-C------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTK-D------G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~-~------G--Rinvagl~~~ni~~va~ai~~v 127 (420)
++.| .+++|++.+ . | ||+++ ++.+++++++++.++
T Consensus 311 ~~~L-~~~gI~v~~~g~~~~~~~~iRis~~--~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 311 FKSL-WDQGIILRDQNKQPSLSGCLRITVG--TREESQRVIDALRAE 354 (356)
T ss_dssp HHHH-HHTTEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHTC
T ss_pred HHHH-HHCCEEEEECCCCCCCCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence 4566 688999876 2 3 78887 578899999998764
No 262
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=95.97 E-value=0.011 Score=59.12 Aligned_cols=64 Identities=16% Similarity=0.028 Sum_probs=44.3
Q ss_pred CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707 201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV 280 (420)
Q Consensus 201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv 280 (420)
|..+..+|++++++++-+. +. +.+.+|+.|+..++. + +.| ||.|++
T Consensus 65 ~~p~~~~l~~~la~~~g~~-------~~-----------------------i~~~sG~~ai~~~~~-l--~~~-gd~Vl~ 110 (403)
T 3cog_A 65 GNPTRNCLEKAVAALDGAK-------YC-----------------------LAFASGLAATVTITH-L--LKA-GDQIIC 110 (403)
T ss_dssp -CHHHHHHHHHHHHHHTCS-------EE-----------------------EEESCHHHHHHHHHT-T--SCT-TCEEEE
T ss_pred CCchHHHHHHHHHHHhCCC-------cE-----------------------EEECCHHHHHHHHHH-H--hCC-CCEEEE
Confidence 3456789999999987332 11 456677888888876 3 457 999999
Q ss_pred cCCCCCCcHHHH----hhcCcc
Q psy16707 281 PTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 281 pdP~w~ny~~i~----~~aG~~ 298 (420)
++|+|+.+...+ +..|++
T Consensus 111 ~~~~y~~~~~~~~~~~~~~G~~ 132 (403)
T 3cog_A 111 MDDVYGGTNRYFRQVASEFGLK 132 (403)
T ss_dssp ESSCCHHHHHHHHHTGGGGTCE
T ss_pred eCCCcchHHHHHHHHHHHcCCE
Confidence 999998644433 345654
No 263
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=95.96 E-value=0.02 Score=55.50 Aligned_cols=105 Identities=10% Similarity=0.096 Sum_probs=73.7
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHH
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNAT 88 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~ 88 (420)
.+++++..+...+...|.+. .+| ++.++++++..|+.|.+.|++.- + .|..+..+.|||.+. +.+.+
T Consensus 269 ~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (391)
T 4dq6_A 269 DIKRNNCFSLVATEASYNNG---ESW---LESFLEYLESNIDFAIKYINENM-P-KLKVRKPEGTYLLWVDFSALGLSDE 340 (391)
T ss_dssp TCCCCCHHHHHHHHHHHHHC---HHH---HHHHHHHHHHHHHHHHHHHHHHC-T-TSEECCCSBSSEEEEECGGGCCCHH
T ss_pred cCCCCCHHHHHHHHHHHhch---HHH---HHHHHHHHHHHHHHHHHHHHhhC-C-CCEecCCCccEEEEEEhhhcCCCHH
Confidence 34567777776666666532 344 66788899999999999998732 1 367777788888755 34454
Q ss_pred H-HHHHHHhcceEEcCC----------CceecccCCcCCHHHHHHHHHhh
Q psy16707 89 Q-VEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 q-v~~L~~~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~v 127 (420)
+ ++.|.++|+|++.+. =||+++ .+..+++..+++|.++
T Consensus 341 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~~ 389 (391)
T 4dq6_A 341 ELESILVQKGKVALNQGNSFGIGGSGYQRINLA-CPRSMLEEALIRIKNA 389 (391)
T ss_dssp HHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-CCHHHHHHHHHHHHHH
Confidence 4 567877889998531 278877 6778888888888764
No 264
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=95.94 E-value=0.089 Score=51.55 Aligned_cols=65 Identities=14% Similarity=0.214 Sum_probs=45.2
Q ss_pred CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707 201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV 280 (420)
Q Consensus 201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv 280 (420)
|..+..+|++++++++ |.+ +. +.+.+||.|+.+++..+ +.| ||.|++
T Consensus 50 ~~~~~~~l~~~la~~~-~~~------~~-----------------------i~~~sGt~a~~~~~~~~--~~~-g~~vl~ 96 (386)
T 1cs1_A 50 GNPTRDVVQRALAELE-GGA------GA-----------------------VLTNTGMSAIHLVTTVF--LKP-GDLLVA 96 (386)
T ss_dssp CCHHHHHHHHHHHHHH-TCS------EE-----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEE
T ss_pred CCccHHHHHHHHHHHh-CCC------cE-----------------------EEeCCHHHHHHHHHHHH--hCC-CCEEEE
Confidence 4556789999999987 321 11 33566699999988755 457 899999
Q ss_pred cCCCCCCcHHH----HhhcCcc
Q psy16707 281 PTPTWGNHIPI----CKHTGLE 298 (420)
Q Consensus 281 pdP~w~ny~~i----~~~aG~~ 298 (420)
++|+|+..... ++..|++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~g~~ 118 (386)
T 1cs1_A 97 PHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_dssp ETTCCHHHHHHHHHHHTTTSCE
T ss_pred ecCCcHhHHHHHHHHHHhcCCE
Confidence 99999963332 3445553
No 265
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=95.84 E-value=0.0089 Score=60.03 Aligned_cols=86 Identities=12% Similarity=0.016 Sum_probs=61.9
Q ss_pred chHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccch
Q psy16707 179 VLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGT 258 (420)
Q Consensus 179 ~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGt 258 (420)
..+.+.+|......+ ..|.|..+..+|++++++++ |.. .+ +.+.+||
T Consensus 41 ~~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-g~~-------~~----------------------i~~~sGt 87 (437)
T 3bb8_A 41 IGTKELQLMVEASLD---GWLTTGRFNDAFEKKLGEYL-GVP-------YV----------------------LTTTSGS 87 (437)
T ss_dssp CCHHHHHHHHHHHHH---CCCBSCHHHHHHHHHHHHHH-TCS-------EE----------------------EEESCHH
T ss_pred CCHHHHHHHHHHHHc---CCcCCChHHHHHHHHHHHHH-CCC-------cE----------------------EEeCCHH
Confidence 334555555444432 23666778999999999977 432 12 5688999
Q ss_pred HHHHHHHHHHH-------hcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 259 GSLRVGAAFLK-------NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 259 gal~~~~~~l~-------~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
.|+.+++..+. .+.| ||.|++++|+|+.|...++..|++
T Consensus 88 ~a~~~al~~l~~~~~~~~~~~~-gd~Vi~~~~~~~~~~~~~~~~g~~ 133 (437)
T 3bb8_A 88 SANLLALTALTSPKLGVRALKP-GDEVITVAAGFPTTVNPTIQNGLI 133 (437)
T ss_dssp HHHHHHHHHTTCGGGGGGSCCT-TCEEEECSSSCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhhhcccccccCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence 99998876541 0456 899999999999999999888875
No 266
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=95.81 E-value=0.069 Score=51.79 Aligned_cols=86 Identities=10% Similarity=0.094 Sum_probs=61.4
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-c----cccceeec---CCCHHHH-HHHHHhcceEEcCC---
Q psy16707 38 QWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-D----QIGMFCYT---GLNATQV-EKLIKEHSVYLTKD--- 104 (420)
Q Consensus 38 ~W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~----Q~GmFs~~---gL~~~qv-~~L~~~~~IY~~~~--- 104 (420)
.|.++ ++.++++++.+|+.|.+.|++.+ +..+. . ..+|+++. |.+.+++ +.|.++|+|++...
T Consensus 262 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~ 337 (392)
T 2z9v_A 262 LYLNEGPEAVWARHALTAKAMRAGVTAMG----LSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGE 337 (392)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGG
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHcC----CeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCC
Confidence 45555 88999999999999999998763 33332 2 23444442 5666655 56777779998643
Q ss_pred ---C--ceec-c-cCCcCCHHHHHHHHHhh
Q psy16707 105 ---G--RISM-A-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 ---G--Rinv-a-gl~~~ni~~va~ai~~v 127 (420)
+ ||++ + ..+..++++++++|.++
T Consensus 338 ~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~ 367 (392)
T 2z9v_A 338 TLGKLTRIGHMGPTAQPIYAIAALTALGGA 367 (392)
T ss_dssp GTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence 2 7884 4 58999999999999887
No 267
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=95.81 E-value=0.021 Score=56.40 Aligned_cols=101 Identities=17% Similarity=0.260 Sum_probs=69.0
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CH-
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NA- 87 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------~~- 87 (420)
.+++..+...+...|.+. .+| ++.++++++..|+.|.+.|++.+ |..+..+.|+|.+..+ +.
T Consensus 276 ~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~ 345 (412)
T 2x5d_A 276 YGTFTPLQVAAIAALEGD---QQC---VRDIARQYQQRRDVLVKGLREAG----WMVENPKASMYVWAKIPEPYAHLGSL 345 (412)
T ss_dssp CCCCHHHHHHHHHHHHSC---SHH---HHHHHHHHHHHHHHHHHHHHHHT----CCCCCCSBSSEEEEECCTTTGGGCHH
T ss_pred cCCCHHHHHHHHHHHhCC---HHH---HHHHHHHHHHHHHHHHHHHHHCC----CEecCCCeeeEEEEEcCCccCCCCHH
Confidence 344445555555666543 134 66778899999999999998863 5555667798876544 33
Q ss_pred HHHHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 88 TQVEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+-++.|.++++|++.+ .+ ||+++. +...++...+.|.++
T Consensus 346 ~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 394 (412)
T 2x5d_A 346 EFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAM 394 (412)
T ss_dssp HHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 3456677788999863 22 889887 777777777776665
No 268
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.021 Score=57.53 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=67.5
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------- 86 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~------- 86 (420)
.|+. |......+...|.+. .+.+.++.++++++..|+.|.+.|++.+ |..+..+.|+|.+..++
T Consensus 305 ~~~~-~~~~~~a~~~aL~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~p~~ 375 (447)
T 3b46_A 305 CFAS-PSPLQEACANSINDA----LKIGYFEKMRQEYINKFKIFTSIFDELG----LPYTAPEGTYFVLVDFSKVKIPED 375 (447)
T ss_dssp TSSC-CHHHHHHHHHHHHHH----HHHTHHHHHHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECTTCCCCTT
T ss_pred cCCC-ChHHHHHHHHHHhCC----cchHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecccccCccc
Confidence 4444 444444555555432 1233467788999999999999998874 55566788998876543
Q ss_pred ------------H-HHHHHHHHhcceEEcCC-------------C--ceecccCCcCCHHHHHHHHHh
Q psy16707 87 ------------A-TQVEKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHA 126 (420)
Q Consensus 87 ------------~-~qv~~L~~~~~IY~~~~-------------G--Rinvagl~~~ni~~va~ai~~ 126 (420)
. +-+++|.++++|++.+. + ||+++. +..+|+..++.|.+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~-~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 376 YPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK-DDAYLENAVERLKL 442 (447)
T ss_dssp CCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-CHHHHHHHHHHGGG
T ss_pred cccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-CHHHHHHHHHHHHH
Confidence 2 34456878899998642 3 778774 66666666666554
No 269
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=95.77 E-value=0.025 Score=55.36 Aligned_cols=104 Identities=13% Similarity=0.163 Sum_probs=70.6
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCHHH
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNATQ 89 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-----L~~~q 89 (420)
+++++..+...+...|.+. .+| ++.++++++..|+.|.+.|++. .|+ |..+..+.|||.+.- .+.++
T Consensus 270 ~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (399)
T 1c7n_A 270 GMPFTTLGYKACEICYKEC---GKW---LDGCIKVIDKNQRIVKDFFEVN-HPE-IKAPLIEGTYLQWIDFRALKMDHKA 341 (399)
T ss_dssp CCCCCHHHHHHHHHHHHHC---HHH---HHHHHHHHHHHHHHHHHHHHHH-CTT-SBCCCCSBSSEEEEECGGGCCCHHH
T ss_pred cCCCCHHHHHHHHHHHhCC---hHH---HHHHHHHHHHHHHHHHHHHHhh-CCC-CeEecCCceEEEEEEcccCCCCHHH
Confidence 4567777777777777532 344 5677888999999999999873 122 555666778876543 34554
Q ss_pred -HHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 90 -VEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 -v~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
++.|.++++|++.+ .+ ||+++.. ..+++...+.|.++
T Consensus 342 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~-~~~l~~~l~~l~~~ 389 (399)
T 1c7n_A 342 MEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP-SSVIQESLERLNKA 389 (399)
T ss_dssp HHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC-HHHHHHHHHHHHHH
Confidence 46676788999864 23 8898865 66777777776654
No 270
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=95.77 E-value=0.027 Score=54.65 Aligned_cols=105 Identities=12% Similarity=0.185 Sum_probs=73.5
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHH
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNAT 88 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~ 88 (420)
.+++++..+...+...|.+. .+| ++.++++++..|+.|.+.|++.- + .|..+..+.|+|.+. |.+.+
T Consensus 265 ~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (391)
T 3dzz_A 265 GIGEPNLLAIPAAIAAYEEG---HDW---LRELKQVLRDNFAYAREFLAKEV-P-EVKVLDSNASYLAWVDISALGMNAE 336 (391)
T ss_dssp TCSSCCTTHHHHHHHHHHHC---HHH---HHHHHHHHHHHHHHHHHHHHHHC-T-TSEECCCCBSSEEEEECGGGCSCHH
T ss_pred ccCCCCHHHHHHHHHHHhcc---HHH---HHHHHHHHHHHHHHHHHHHHhhC-C-CcEEeccCceEEEEEehhhcCCCHH
Confidence 34556666666666666431 334 67778899999999999998731 1 266667788888764 45555
Q ss_pred HH-HHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHhh
Q psy16707 89 QV-EKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 qv-~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v 127 (420)
++ ++|.++++|++.+.+ ||+++ .+..+++...++|.++
T Consensus 337 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~~ 385 (391)
T 3dzz_A 337 DFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CPKELVIDGMQRLKQG 385 (391)
T ss_dssp HHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence 54 556678999987432 88988 5788888888888775
No 271
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=95.74 E-value=0.033 Score=53.76 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=69.3
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCccccccccceeecCC--CHHHH-HH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQK-EGSNKPWNHITDQIGMFCYTGL--NATQV-EK 92 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~-~~~~~~w~~i~~Q~GmFs~~gL--~~~qv-~~ 92 (420)
+++..+...+...|.+. + .++.+++++...|+.|.+.|++ .+ |.. ....|+|.+..+ +.+++ +.
T Consensus 255 ~~~~~~~~~~~~~l~~~----~---~~~~~~~~~~~~~~~l~~~l~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~ 322 (363)
T 3ffh_A 255 NTTSIGQKLAIEAIKDQ----A---FIGECRTSNANGIKQYEAFAKRFEK----VKL-YPANGNFVLIDLGIEAGTIFSY 322 (363)
T ss_dssp CCBHHHHHHHHHHHHCH----H---HHHHHHHHHHHHHHHHHHHHHHCTT----CEE-CCCCSSEEEEECSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCH----H---HHHHHHHHHHHHHHHHHHHHhhCCC----ceE-CCCCCeEEEEECCCCHHHHHHH
Confidence 56667777788888753 3 4567788999999999999987 33 443 345677777666 44554 45
Q ss_pred HHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707 93 LIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 93 L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v 127 (420)
|. +++|++.+.. ||+++ ++.++++++++|.++
T Consensus 323 l~-~~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 323 LE-KNGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKL 362 (363)
T ss_dssp HH-HTTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred HH-HCCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHh
Confidence 54 6799987532 78876 888999999999875
No 272
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=95.68 E-value=0.18 Score=51.09 Aligned_cols=83 Identities=12% Similarity=0.122 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----CCCCCCcccCCCCceEEe-cCCC---HHHHHHHHHhCCe---EEe-------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKE----GSNKPWNHITDQIGMFCY-TGLN---ATQVEKLIKEHSV---YLT------- 393 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~----g~~~~w~~i~~q~GmF~~-~~l~---~~~v~~Ll~e~~V---y~~------- 393 (420)
+.++.+.+++.+.|+.+.+.|++. | +..+.++ +.+++ ++.+ .+..+.|. +.+| -+.
T Consensus 346 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g----~~v~~~~-~~v~~~~~~~~~~~~l~~~L~-~~gi~~~rv~~~~g~f~ 419 (456)
T 2z67_A 346 KNYLELVKNQKNSKKLLDELLNDLSKKTG----GKFLDVE-SPIASCISVNSDPVEIAAKLY-NLRVTGPRGIKKTDHFG 419 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSS----CCBCCCC-CSSEEEEECSSCHHHHHHHHH-HTTEESCEEECTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccC----CEecCCC-CeEEEEEecccHHHHHHHHHH-HcCCCcceEEeecCccc
Confidence 345666788899999999999887 6 3444444 55443 2112 35556665 4453 343
Q ss_pred -------CCC--cEEEc-ccCCCCHHHHHHHHHHHhC
Q psy16707 394 -------KDG--RISMA-GVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 394 -------p~g--Ris~a-gl~~~ni~~la~AI~~vv~ 420 (420)
+.+ |+|++ +.+.+.|+++.++|+++++
T Consensus 420 G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~~ 456 (456)
T 2z67_A 420 NCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKILL 456 (456)
T ss_dssp HTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC--
T ss_pred cccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHhC
Confidence 333 78877 5688999999999988653
No 273
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=95.63 E-value=0.029 Score=55.09 Aligned_cols=103 Identities=8% Similarity=0.088 Sum_probs=65.5
Q ss_pred CCCchHHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---Cc-eEEecCCCHHHH
Q psy16707 307 SSPPIHGARIVQEILGDPKLKAQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IG-MFCYTGLNATQV 381 (420)
Q Consensus 307 s~pp~~ga~iv~~IL~dp~L~~~w~~e-l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~G-mF~~~~l~~~~v 381 (420)
.+||..++..+...| + ...++ ++.+.++++++++.+.+.|+++| +..+.++ .+ +..+..-+.+..
T Consensus 251 ~t~~~~~~~a~~aal-----~-~~~~~g~~~~~~~~~~l~~~l~~~l~~~g----~~~~~~~~~~~~~i~~~~~~~~~~~ 320 (379)
T 3ke3_A 251 ATMPTDSLRQFRDAI-----L-EAKEIGFDILRDAQWELGNRVRKVLTDKG----IESVAAEGFEAPGVVVSYTERDDMH 320 (379)
T ss_dssp SCCCHHHHHHHHHHH-----H-HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSBCTTCBCSSEEEEECSCHHHH
T ss_pred CCCCHHHHHHHHHHH-----H-HHHHhcHHHHHHHHHHHHHHHHHHHHHcC----CEecCCccccCceEEEEccCCcchH
Confidence 366666655444323 2 11233 67788999999999999999987 4433332 22 222222233331
Q ss_pred -HHHHHhCCeEEeCC----------C---cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 382 -EKLIKEHSVYLTKD----------G---RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 382 -~~Ll~e~~Vy~~p~----------g---Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
...++++||++.++ + ||++.+ .+.++|+++.++|.+++
T Consensus 321 ~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l 373 (379)
T 3ke3_A 321 KGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKAL 373 (379)
T ss_dssp SSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHH
Confidence 34447889998764 2 888764 47899999999998875
No 274
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=95.62 E-value=0.022 Score=56.51 Aligned_cols=104 Identities=12% Similarity=0.076 Sum_probs=70.2
Q ss_pred ccchHHHHHHHHhCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------
Q psy16707 18 PPIHGARIVQEILGDP--KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------- 86 (420)
Q Consensus 18 PP~hGa~iv~~IL~~~--~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--------- 86 (420)
++......+...|.+. .+ ..|.+.++.++++++..|+.|.+.|++.+ |..+..+.|+|.+.-+.
T Consensus 288 ~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~ 362 (429)
T 1yiz_A 288 CATPIQEAIAVGFETELKRL-KSPECYFNSISGELMAKRDYMASFLAEVG----MNPTVPQGGYFMVADWSSLDSKVDLT 362 (429)
T ss_dssp CCHHHHHHHHHHHHHHHTTT-TSTTSHHHHHHHHHHHHHHHHHHHHHHHT----CEEEECSBSSEEEEECCSSCTTTTCC
T ss_pred CChHHHHHHHHHHhcccccc-cchHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEEccccccccccc
Confidence 4444455555555541 00 11244477888999999999999998863 55556677888775443
Q ss_pred -------HHH-HHHHHHhcceEEcC-------------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 87 -------ATQ-VEKLIKEHSVYLTK-------------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 87 -------~~q-v~~L~~~~~IY~~~-------------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.++ +++|.++++|++.+ .| ||+++ .+..+|+..+++|.++
T Consensus 363 ~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~ 425 (429)
T 1yiz_A 363 QETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF-KKDENLQKAAEILRKW 425 (429)
T ss_dssp SSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec-CCHHHHHHHHHHHHHh
Confidence 333 45577789999864 23 78887 4888899999988876
No 275
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=95.54 E-value=0.048 Score=54.32 Aligned_cols=76 Identities=11% Similarity=0.151 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-C----HHHHHHHHHhCCeEEeCCC----cEEEc-ccCCC
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-N----ATQVEKLIKEHSVYLTKDG----RISMA-GVTSK 406 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~----~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ 406 (420)
+.++++++|+.|.+.|+++ +..+ +..|.|+++.+ + .+.++.|+ ++||++.|+| ||+++ ..+.+
T Consensus 330 ~~~~~~~~~~~l~~~L~~~-----~~~~-~~~g~~~~i~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~lRis~~~~~t~e 402 (419)
T 2eo5_A 330 LLPHVNEIGKIFAEELQGL-----ADDV-RGIGLAWGLEYNEKKVRDRIIGESF-KRGLLLLPAGRSAIRVIPPLVISEE 402 (419)
T ss_dssp HHHHHHHHHHHHHHHHTTS-----SSEE-EEETTEEEEECSCHHHHHHHHHHHH-HTTEECEEETTTEEEECCCTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHh-----hhhe-EeeeEEEEEEEecCccHHHHHHHHH-HCCCEEecCCCCEEEEECCCCCCHH
Confidence 6788999999999999875 2222 35678887655 2 23446665 8899999854 88765 46888
Q ss_pred CHHHHHHHHHHHh
Q psy16707 407 NVGYLAKAIHAVT 419 (420)
Q Consensus 407 ni~~la~AI~~vv 419 (420)
+++.+.++|.+++
T Consensus 403 ~i~~~l~~l~~~l 415 (419)
T 2eo5_A 403 EAKQGLDILKKVI 415 (419)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998765
No 276
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=95.50 E-value=0.017 Score=57.60 Aligned_cols=93 Identities=16% Similarity=0.069 Sum_probs=64.5
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCC--CCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccc
Q psy16707 169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPI--IGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAA 246 (420)
Q Consensus 169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~--~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 246 (420)
.|+...-.++.++.++++.. . ...+.|.+. .+..++++.+++++ |.+ .+
T Consensus 24 i~~s~~~~~~~~~~~~~~~~---~-~~~~~y~~~~~~~~~~l~~~la~~~-g~~-------~~----------------- 74 (412)
T 2cb1_A 24 IYAVAAYGFKTLEEGQERFA---T-GEGYVYARQKDPTAKALEERLKALE-GAL-------EA----------------- 74 (412)
T ss_dssp CCCCSBCCCSSHHHHHHHHH---H-CCSCSBTTTCCHHHHHHHHHHHHHH-TCS-------EE-----------------
T ss_pred ccccceeecCChHHHHHHhc---c-ccCcCcCCCCChHHHHHHHHHHHHh-CCC-------cE-----------------
Confidence 55554555677777776654 2 246788865 45788999999876 321 22
Q ss_pred cccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 247 FQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 247 ~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
+.|.|||.|+..++..+ +.| ||.|++++|+|+.+...+ +..|++
T Consensus 75 -----~~~~~gt~a~~~al~~l--~~~-gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 122 (412)
T 2cb1_A 75 -----VVLASGQAATFAALLAL--LRP-GDEVVAAKGLFGQTIGLFGQVLSLMGVT 122 (412)
T ss_dssp -----EEESSHHHHHHHHHHTT--CCT-TCEEEEETTCCHHHHHHHHHTTTTTTCE
T ss_pred -----EEECCHHHHHHHHHHHH--hCC-CCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence 67999999999988644 457 899999999998655443 345653
No 277
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=95.46 E-value=0.051 Score=53.09 Aligned_cols=90 Identities=12% Similarity=0.131 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccceeec--CCCHHHHHHHHHhcceEEcCC-----
Q psy16707 35 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYT--GLNATQVEKLIKEHSVYLTKD----- 104 (420)
Q Consensus 35 L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~----- 104 (420)
++.+|.+.++.++++++.+|+.|.+.|++.. + +..+.. +.||+++. +.+.+++...-.+++|++...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~g~~~~~ 369 (406)
T 3cai_A 293 RRERLAVSMQSADAYLNRVFDYLMVSLRSLP--L-VMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRV 369 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT--T-EEECCCCSSBCSEEEEEETTBCHHHHHHHHHHTTEECEECCSCHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHhcCC--C-eEEcCCccccCCEEEEEECCcCHHHHHHHHHHCCcEEecCChHHH
Confidence 4567877899999999999999999998742 1 332222 35666653 666776654335689988631
Q ss_pred ------------CceecccCC-cCCHHHHHHHHHhh
Q psy16707 105 ------------GRISMAGVT-SKNVGYLAKAIHAN 127 (420)
Q Consensus 105 ------------GRinvagl~-~~ni~~va~ai~~v 127 (420)
-||++...+ ..++++++++|.++
T Consensus 370 ~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 370 LDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred HHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 377877654 57999999998875
No 278
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=95.41 E-value=0.035 Score=53.79 Aligned_cols=101 Identities=12% Similarity=0.092 Sum_probs=67.4
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CH-HHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NA-TQVE 91 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~-~qv~ 91 (420)
+++.....++...|.+ +.+.++.++++++..|+.|.+.|++. ..+..+..+.|+|.+..+ +. +.++
T Consensus 254 ~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (375)
T 3op7_A 254 CAGVFDDLVAQLALAH------YQEILERNRHILEENLAILDQWIEEE---PLVSYIRPAVVSTSFVKIAVDMPMEDFCL 324 (375)
T ss_dssp CCCHHHHHHHHHHHHT------HHHHHHHHHHHHHHHHHHHHHHHHHC---TTEEECCCSSSSCEEEEECCSSCHHHHHH
T ss_pred CCCcHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHHHHhhC---CCceEecCCCeEEEeEEcCCCCCHHHHHH
Confidence 4445555556555543 44557778888899999999999873 235556667777776533 33 4456
Q ss_pred HHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707 92 KLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 92 ~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v 127 (420)
.|.++++|++.+.+ ||+++.-+ .+++...++|.++
T Consensus 325 ~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~-~~i~~~l~~l~~~ 367 (375)
T 3op7_A 325 QLLQEHGVLLVPGNRFERDGYVRLGFACEQ-ETLIKGLEKLSQF 367 (375)
T ss_dssp HHHHHHCEECEEGGGGTCTTEEEECCCSCH-HHHHHHHHHHHHH
T ss_pred HHHHhCCEEEeChhhhCCCCeEEEEecCCH-HHHHHHHHHHHHH
Confidence 77788999986432 67766544 6777777777665
No 279
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=95.34 E-value=0.09 Score=50.68 Aligned_cols=82 Identities=20% Similarity=0.287 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc----cccccceeec----CCCHHHH-HHHHHhcceEEcCC------C-
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI----TDQIGMFCYT----GLNATQV-EKLIKEHSVYLTKD------G- 105 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i----~~Q~GmFs~~----gL~~~qv-~~L~~~~~IY~~~~------G- 105 (420)
.++.+.++++.+|+.|.+.|++.+ +..+ ..+.+++... +.+.+++ +.|.++++|++... +
T Consensus 284 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 359 (393)
T 3kgw_A 284 GLENCWRRHREATAHLHKHLQEMG----LKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERV 359 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcC----CeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCE
Confidence 378899999999999999999873 2222 2233443322 5566655 57878889998752 2
Q ss_pred -ceecccC--CcCCHHHHHHHHHhh
Q psy16707 106 -RISMAGV--TSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 -Rinvagl--~~~ni~~va~ai~~v 127 (420)
||++.|. +..+++.++++|.++
T Consensus 360 iRi~~~~~~~~~~~i~~~~~~l~~~ 384 (393)
T 3kgw_A 360 LRIGLLGYNATTENVDRVAEALREA 384 (393)
T ss_dssp EEEECCGGGCCHHHHHHHHHHHHHH
T ss_pred EEEEecccCCCHHHHHHHHHHHHHH
Confidence 7887564 789999999998876
No 280
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=95.31 E-value=0.058 Score=52.11 Aligned_cols=82 Identities=20% Similarity=0.234 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc---cccccceeec---CCCHHH-HHHHHHhcceEEcCCC-----ceecc
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCYT---GLNATQ-VEKLIKEHSVYLTKDG-----RISMA 110 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i---~~Q~GmFs~~---gL~~~q-v~~L~~~~~IY~~~~G-----Rinva 110 (420)
++.++++++.+|+.|.+.|++.. .|..+ ..+.+||++. |.+.++ ++.| .+++|++...+ ||++.
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~iRis~~ 370 (390)
T 1elu_A 295 AEERYQAICQRSEFLWRGLNQLP---HVHCLATSAPQAGLVSFTVDSPLGHRAIVQKL-EEQRIYLRTIADPDCIRACCH 370 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHST---TEEESCSSCCSSSEEEEEECSSSCHHHHHHHH-HHTTEECEEETTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC---CcEEecCccccccEEEEEcCCCCCHHHHHHHH-HHCCEEEEecCCCCeEEEecc
Confidence 88899999999999999998752 25544 2356777763 445555 4566 57799987543 78873
Q ss_pred -cCCcCCHHHHHHHHHhhC
Q psy16707 111 -GVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 111 -gl~~~ni~~va~ai~~v~ 128 (420)
..+..++++++++|.+++
T Consensus 371 ~~~~~~~i~~~~~~l~~~~ 389 (390)
T 1elu_A 371 YITDEEEINHLLARLADFG 389 (390)
T ss_dssp TTCCHHHHHHHHHHHTTCC
T ss_pred cCCCHHHHHHHHHHHHhhC
Confidence 478899999999998764
No 281
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=95.27 E-value=0.049 Score=53.71 Aligned_cols=81 Identities=12% Similarity=0.163 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------CHHHH-HHHHHhcceEEcC------------
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NATQV-EKLIKEHSVYLTK------------ 103 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~~~qv-~~L~~~~~IY~~~------------ 103 (420)
++.++++++..|+.|.+.|++.+ |..+..+.|+|.+..+ +.+++ ++|.++++|++.+
T Consensus 285 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~ 360 (411)
T 2o0r_A 285 VAALRNSLRARRDRLAAGLTEIG----FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQA 360 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT----CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccc
Confidence 56778899999999999998763 5656667888876544 34444 5577788999842
Q ss_pred -------CC--ceecccCCcCCHHHHHHHHHhhC
Q psy16707 104 -------DG--RISMAGVTSKNVGYLAKAIHANG 128 (420)
Q Consensus 104 -------~G--Rinvagl~~~ni~~va~ai~~v~ 128 (420)
.+ ||+++. +..+++.++++|.++.
T Consensus 361 ~~~~~~~~~~iRis~~~-~~e~i~~~~~~l~~~~ 393 (411)
T 2o0r_A 361 SQQADVWNHLVRFTFCK-RDDTLDEAIRRLSVLA 393 (411)
T ss_dssp ----CCGGGCEEEECCS-CHHHHHHHHHHHGGGG
T ss_pred cccccCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 12 788754 7778888888887764
No 282
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=95.15 E-value=0.096 Score=50.86 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=69.5
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----c-ceee---cCC
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----G-MFCY---TGL 85 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----G-mFs~---~gL 85 (420)
.+.++|..+...+...|. ..+.+.++.++++++..|+.|.+.|++.+ |..+..+. | ++++ .|.
T Consensus 256 ~~~~~~~~~~~a~~~al~-----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~ 326 (396)
T 2ch1_A 256 YHHTVASNLIFALREALA-----QIAEEGLENQIKRRIECAQILYEGLGKMG----LDIFVKDPRHRLPTVTGIMIPKGV 326 (396)
T ss_dssp CCCCCCHHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHT----CCBSSCSGGGBCTTEEEEECCTTC
T ss_pred CCCCCcHHHHHHHHHHHH-----HHHHhhHHHHHHHHHHHHHHHHHHHHHCC----CeeccCCccccCCceEEEEcCCCC
Confidence 445677666555554442 22234588899999999999999998873 33333332 3 3333 256
Q ss_pred CHHHH-HHHHHhcceEEcC------CC--ceecccC--CcCCHHHHHHHHHhh
Q psy16707 86 NATQV-EKLIKEHSVYLTK------DG--RISMAGV--TSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~~qv-~~L~~~~~IY~~~------~G--Rinvagl--~~~ni~~va~ai~~v 127 (420)
+.+++ ++|.++++|++.. .+ ||++.|. +..+++.++++|.++
T Consensus 327 ~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~ 379 (396)
T 2ch1_A 327 DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKES 379 (396)
T ss_dssp CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHH
Confidence 77666 4677778998864 12 6777554 678899999999887
No 283
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=95.14 E-value=0.047 Score=53.79 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=69.9
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---------CH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---------NA 87 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---------~~ 87 (420)
+++..+...+...|.+.. ..| ++.++++++..|+.|.+.|++. + .|..+..+.|+|.+..+ +.
T Consensus 290 ~~~~~~~~a~~~~l~~~~--~~~---~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (416)
T 1bw0_A 290 GPCTVVQAALGEALLNTP--QEH---LDQIVAKIEESAMYLYNHIGEC--I-GLAPTMPRGAMYLMSRIDLEKYRDIKTD 361 (416)
T ss_dssp CSCHHHHHHHHHHHHSSC--HHH---HHHHHHHHHHHHHHHHHHHTTS--T-TEEECCCCBTTEEEEEECGGGBSSCCSH
T ss_pred CCCcHHHHHHHHHHhccc--HHH---HHHHHHHHHHHHHHHHHHHHhC--C-CCcccCCCeeEEEEEeCCHHHcCCCCCH
Confidence 455566666777666422 334 5567788889999999999764 2 25555567798877543 44
Q ss_pred HHH-HHHHHhcceEEcC------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 88 TQV-EKLIKEHSVYLTK------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv-~~L~~~~~IY~~~------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+++ +.|.++++|++.+ .| ||++ +.+..+++...+.|.++
T Consensus 362 ~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~-~~~~e~l~~~l~~l~~~ 409 (416)
T 1bw0_A 362 VEFFEKLLEEENVQVLPGTIFHAPGFTRLTT-TRPVEVYREAVERIKAF 409 (416)
T ss_dssp HHHHHHHHHHHCEECEEGGGGTCTTEEEEEC-CSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEecccccCCCCeEEEEe-cCCHHHHHHHHHHHHHH
Confidence 554 6676788999864 23 8898 57888888888877664
No 284
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=95.12 E-value=0.15 Score=49.57 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=59.4
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc---ccce-ee---cCCCHHHH-HHHHHhcceEEcC-----
Q psy16707 38 QWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMF-CY---TGLNATQV-EKLIKEHSVYLTK----- 103 (420)
Q Consensus 38 ~W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q---~GmF-s~---~gL~~~qv-~~L~~~~~IY~~~----- 103 (420)
.+.++ ++.++++++.+|+.|.+.|++.+. ..+..+ .+.| ++ -|.+.+++ +.|.++++|++..
T Consensus 282 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~ 357 (411)
T 3nnk_A 282 LILQEGLDYGIARHKLHGDALVKGIQAMGL----ETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPL 357 (411)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTTC----CBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGG
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHcCC----EeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCC
Confidence 34555 899999999999999999988642 222221 2333 22 15667665 4578888999854
Q ss_pred -CC--ceecccC--CcCCHHHHHHHHHhh
Q psy16707 104 -DG--RISMAGV--TSKNVGYLAKAIHAN 127 (420)
Q Consensus 104 -~G--Rinvagl--~~~ni~~va~ai~~v 127 (420)
.+ ||++.|. +.++|+.++++|.++
T Consensus 358 ~~~~iRi~~~~~~~~~~~i~~~~~~l~~~ 386 (411)
T 3nnk_A 358 HGKVWRIGTMGYNARKDCVMTTLSALEAV 386 (411)
T ss_dssp TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCccCcCCHHHHHHHHHHHHHH
Confidence 22 7787453 568899999998887
No 285
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=95.08 E-value=0.22 Score=47.82 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=70.3
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc----cccceeec---
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIGMFCYT--- 83 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~----Q~GmFs~~--- 83 (420)
....+|+..+...+...|. .|.++ ++.++++++.+|+.|.+.|++.+ |..+.. ..+++++.
T Consensus 253 ~~~~~~~~~~~~a~~~~l~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~ 322 (386)
T 2dr1_A 253 STPSTPPMPQVFGINVALR------IIEKMGGKEKWLEMYEKRAKMVREGVREIG----LDILAEPGHESPTITAVLTPP 322 (386)
T ss_dssp SCSSCCCHHHHHHHHHHHH------HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCTTCBCSSEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHHHH------HHHHhcCHHHHHHHHHHHHHHHHHHHHHcC----CeeCcCccccCCceEEEEcCC
Confidence 4445666666666655553 24554 78899999999999999998863 333332 23344442
Q ss_pred CCCHHHH-HHHHHhcceEEcCC--------Cceeccc-CCcCCHHHHHHHHHhh
Q psy16707 84 GLNATQV-EKLIKEHSVYLTKD--------GRISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 84 gL~~~qv-~~L~~~~~IY~~~~--------GRinvag-l~~~ni~~va~ai~~v 127 (420)
|.+.+++ ++|.++ +|++.+. =||+++. .+..++++++++|.++
T Consensus 323 ~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 375 (386)
T 2dr1_A 323 GIKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREV 375 (386)
T ss_dssp TCCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 5566664 567665 9998642 2788886 7889999999998876
No 286
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=95.06 E-value=0.066 Score=51.95 Aligned_cols=96 Identities=11% Similarity=0.160 Sum_probs=70.3
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHH-HHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQV-EKL 93 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~qv-~~L 93 (420)
+++..+...+...|.+. +| ++.++++++..|+.|.+.|++.+ |..+ ...|+|...-+ +.+++ +.|
T Consensus 261 ~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~~~~~~~~~~~~~~l~~~l 328 (369)
T 3cq5_A 261 HLSALSQAAAIVALRHS----AD---TLGTVEKLSVERVRVAARLEELG----YAVV-PSESNFVFFGDFSDQHAAWQAF 328 (369)
T ss_dssp CSCHHHHHHHHHHHHTH----HH---HHTHHHHHHHHHHHHHHHHHHHT----CEEE-CCSSSEEEEECCSSHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCH----HH---HHHHHHHHHHHHHHHHHHHHhCC----CEEC-CCCCeEEEEECCCCHHHHHHHH
Confidence 46677777788888763 23 66788899999999999998753 4443 55677766554 45554 456
Q ss_pred HHhcceEEcCC---C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTKD---G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~~---G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.+++|++.+. + ||+++ ++.+++.++++|.++
T Consensus 329 -~~~gi~v~~~~~~~~iRis~~--~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 329 -LDRGVLIRDVGIAGHLRTTIG--VPEENDAFLDAAAEI 364 (369)
T ss_dssp -HHTTEECBCCSCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred -HHCCEEEEECCCCCeEEEEeC--CHHHHHHHHHHHHHH
Confidence 5789998764 3 88887 788999999999886
No 287
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=95.00 E-value=0.73 Score=46.91 Aligned_cols=83 Identities=10% Similarity=0.231 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-CCCCceEEec--CCC-------HHHHHHHHHhCCeEEeC----CC--
Q psy16707 333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYT--GLN-------ATQVEKLIKEHSVYLTK----DG-- 396 (420)
Q Consensus 333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i-~~q~GmF~~~--~l~-------~~~v~~Ll~e~~Vy~~p----~g-- 396 (420)
.++.+.++..+.++.|.+.|++.. .++.+ .++.++++|- +.. .+..+.|. +.|+.+.+ .|
T Consensus 391 g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~-~~G~~~~~~~~~~g~~ 466 (497)
T 2qma_A 391 ALGDMYDHLLAQTLEVADMIRTND---QFELLAEPSLSTVLFRATHETADLDELNKALRLEAL-TRGIAVLGETIVDGKT 466 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCT---TEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHH-HHTSCBCEEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCC---CeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHH-hCCCEEEEeeEECCEE
Confidence 355667888899999999998752 15543 4456666653 211 12234554 55776643 22
Q ss_pred --cEEEc--ccCCCCHHHHHHHHHHHh
Q psy16707 397 --RISMA--GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 --Ris~a--gl~~~ni~~la~AI~~vv 419 (420)
||+++ ..+.+.++++.++|.++.
T Consensus 467 ~lRis~~~~~~t~edi~~~~~~l~~~~ 493 (497)
T 2qma_A 467 ALKFTILNPCLTTSDFESLLSKINMLA 493 (497)
T ss_dssp EEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 99885 457888999999998764
No 288
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=94.95 E-value=0.18 Score=47.98 Aligned_cols=100 Identities=19% Similarity=0.262 Sum_probs=66.1
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---ccc-ceeec-----CC
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIG-MFCYT-----GL 85 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~G-mFs~~-----gL 85 (420)
+++..+...+...|. .+.++ ++.++++++.+|+.|.+.|++.+ +..+.. +.| |+++. +.
T Consensus 242 ~~~~~~~~a~~~al~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (366)
T 1m32_A 242 TSPTHTVLAFAQALK------ELAKEGGVAARHQRYQQNQRSLVAGMRALG----FNTLLDDELHSPIITAFYSPEDPQY 311 (366)
T ss_dssp CCCHHHHHHHHHHHH------HHHHHTHHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCCCTTC
T ss_pred CCCHHHHHHHHHHHH------HHHHccCHhHHHHHHHHHHHHHHHHHHHCC----CeeccCchhcCceEEEEEcCccCCC
Confidence 444444444444432 24444 78899999999999999998863 333332 456 44443 45
Q ss_pred CHHHHH-HHHHhcceEEcCCC-------ceecccC-CcCCHHHHHHHHHhh
Q psy16707 86 NATQVE-KLIKEHSVYLTKDG-------RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~~qv~-~L~~~~~IY~~~~G-------Rinvagl-~~~ni~~va~ai~~v 127 (420)
+.+++. .|. +++|++.... ||+++.. +.+++++++++|.++
T Consensus 312 ~~~~~~~~l~-~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 361 (366)
T 1m32_A 312 RFSEFYRRLK-EQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTA 361 (366)
T ss_dssp CHHHHHHHHH-HTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 666654 554 5599986432 8888876 479999999999887
No 289
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=94.91 E-value=0.12 Score=49.02 Aligned_cols=103 Identities=13% Similarity=0.101 Sum_probs=67.5
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccceeec---CCCHHH
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT---GLNATQ 89 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~--Q~GmFs~~---gL~~~q 89 (420)
..+++..+...+...|. .+.++++.++++++.+|+.|.+.|++.+ +..+.. ..+++++. |.+.++
T Consensus 228 ~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T 1iug_A 228 AWTPAINLVLAVAAVLE------EVLPRLEEHLALKAWQNALLYGVGEEGG----LRPVPKRFSPAVAAFYLPEGVPYAR 297 (352)
T ss_dssp SSCCCHHHHHHHHHHHH------HHGGGHHHHHHHHHHHHHHHHHHHHHTT----CEESCSSBCTTCEEEECCTTCCHHH
T ss_pred CCCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcccccccCCeEEEEEcCCCCCHHH
Confidence 34555555444444442 2333478899999999999999998763 443333 33455543 566666
Q ss_pred HHHHHHhcceEEcCC--------CceecccCC-cCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKD--------GRISMAGVT-SKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~--------GRinvagl~-~~ni~~va~ai~~v 127 (420)
+...-.+++|++... =||+++..+ ..+++.++++|.++
T Consensus 298 ~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 344 (352)
T 1iug_A 298 VKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREV 344 (352)
T ss_dssp HHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHH
Confidence 654334569998632 378887764 78999999999876
No 290
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=94.87 E-value=0.08 Score=51.58 Aligned_cols=106 Identities=12% Similarity=0.163 Sum_probs=67.6
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCH
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNA 87 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-----L~~ 87 (420)
..|++++..+...+...|.+ ..+| ++.++++++..|+.|.+.|++.- |+ |..+..+.|||.+.- .+.
T Consensus 264 ~~~~~~~~~~~~a~~~~l~~---~~~~---~~~~~~~~~~~~~~l~~~L~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
T 1d2f_A 264 DGLSSPSVLALTAHIAAYQQ---GAPW---LDALRIYLKDNLTYIADKMNAAF-PE-LNWQIPQSTYLAWLDLRPLNIDD 335 (390)
T ss_dssp SCCCSCCHHHHHHHHHHHHH---CHHH---HHHHHHHHHHHHHHHHHHHHHHC-SS-CCCCCCSBCSEEEEECGGGCCCH
T ss_pred cccCCCCHHHHHHHHHHHhc---CHHH---HHHHHHHHHHHHHHHHHHHHhhC-CC-CEEecCCccEEEEEEccccCCCH
Confidence 35656676666666666653 1345 56678889999999999998731 22 555555667876543 455
Q ss_pred HHH-HHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 88 TQV-EKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv-~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+++ +.|.++++|++.+ .+ ||+++. +..+++...+.|.++
T Consensus 336 ~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~ 385 (390)
T 1d2f_A 336 NALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINA 385 (390)
T ss_dssp HHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 544 5677688999854 23 888886 455666655555443
No 291
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=94.85 E-value=0.036 Score=53.99 Aligned_cols=100 Identities=14% Similarity=0.156 Sum_probs=65.6
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------CH
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA 87 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~~ 87 (420)
.|+.++ .+...+...|.+. .+| ++.++++++..|+.|.+.|++.+ |..+..+.|+|.+.-+ +.
T Consensus 266 ~~~~~~-~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~ 334 (386)
T 1u08_A 266 TFSVNT-PAQLALADMLRAE---PEH---YLALPDFYRQKRDILVNALNESR----LEILPCEGTYFLLVDYSAVSTLDD 334 (386)
T ss_dssp TSSCCH-HHHHHHHHHHHHC---THH---HHTHHHHHHHHHHHHHHHTTSSS----CEECCCCBSSEEEEECTTTCCSCH
T ss_pred ccCCCh-HHHHHHHHHHhCC---cHH---HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCceEEEEEecCCCCCCCH
Confidence 354433 3455555555432 334 56788899999999999998752 5555567788877644 45
Q ss_pred HHH-HHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHH
Q psy16707 88 TQV-EKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIH 125 (420)
Q Consensus 88 ~qv-~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~ 125 (420)
+++ +.|.++++|++.+ .+ ||+++. +..+|+..+++|.
T Consensus 335 ~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~ 384 (386)
T 1u08_A 335 VEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLR 384 (386)
T ss_dssp HHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHh
Confidence 555 4477788999853 22 788863 6667777777664
No 292
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=94.77 E-value=0.49 Score=48.31 Aligned_cols=84 Identities=8% Similarity=0.252 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC---CCCceEEecCCC--------------------HHHHHHHHHh
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT---DQIGMFCYTGLN--------------------ATQVEKLIKE 387 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~---~q~GmF~~~~l~--------------------~~~v~~Ll~e 387 (420)
+.++.+.++..+.++.|.+.|++. | ++.+. ++.++|+|...+ .+..+.|.++
T Consensus 382 ~g~~~~~~~~~~~a~~l~~~L~~~~~----~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 457 (504)
T 2okj_A 382 VGFENQINKCLELAEYLYAKIKNREE----FEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES 457 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTT----EEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----EEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC
Confidence 345667788889999999999875 3 55453 677888763211 2344677655
Q ss_pred CCeEEeC----C--C--cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707 388 HSVYLTK----D--G--RISMAG--VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 388 ~~Vy~~p----~--g--Ris~ag--l~~~ni~~la~AI~~vv 419 (420)
..+++.+ + + ||+++. .+.+.|+++.++|.++.
T Consensus 458 G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~ 499 (504)
T 2okj_A 458 GTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLG 499 (504)
T ss_dssp TSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 4455542 2 1 888863 46678999999998865
No 293
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=94.72 E-value=0.16 Score=48.77 Aligned_cols=105 Identities=11% Similarity=0.059 Sum_probs=67.2
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----ccceee--cCCCH
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCY--TGLNA 87 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q----~GmFs~--~gL~~ 87 (420)
.+++|+..+...+...|. .|.+.++.++++++.+|+.|.+.|++. ++ +..+..+ .+++++ .|.+.
T Consensus 231 ~~~~~~~~~~~~~~~al~------~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T 4eb5_A 231 RSGSENVPSIVGFGKAAE------ITAMEWREEAERLRRLRDRIIDNVLKI--EE-SYLNGHPEKRLPNNVNVRFSYIEG 301 (382)
T ss_dssp SCSCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHTTS--TT-EEECSCSSSBCTTEEEEEETTSCH
T ss_pred cCCCccHHHHHHHHHHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhC--CC-eEEeCCcccCCCCEEEEEeCCcCH
Confidence 345555554443333332 344568889999999999999999864 22 3322221 346544 46677
Q ss_pred HHHHHHHHhcceEEcCC-------------------------C--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 88 TQVEKLIKEHSVYLTKD-------------------------G--RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv~~L~~~~~IY~~~~-------------------------G--Rinvag-l~~~ni~~va~ai~~v 127 (420)
+++...-.+++|++... + ||+++. .+.+++++++++|.++
T Consensus 302 ~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (382)
T 4eb5_A 302 ESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp HHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 76654445789988642 2 777764 4678999999998876
No 294
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=94.43 E-value=0.06 Score=53.60 Aligned_cols=14 Identities=21% Similarity=-0.033 Sum_probs=9.4
Q ss_pred cCCHHHHHHHHHhh
Q psy16707 114 SKNVGYLAKAIHAN 127 (420)
Q Consensus 114 ~~ni~~va~ai~~v 127 (420)
......++++|.+.
T Consensus 85 ~~~~~~l~~~la~~ 98 (419)
T 2eo5_A 85 NIPQLELAKKLVTY 98 (419)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 34456777887776
No 295
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=94.35 E-value=0.18 Score=49.33 Aligned_cols=90 Identities=12% Similarity=0.163 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--cccccee--e--cCCCHHHHHHHHHhcceEEcCCC---
Q psy16707 35 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFC--Y--TGLNATQVEKLIKEHSVYLTKDG--- 105 (420)
Q Consensus 35 L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~Q~GmFs--~--~gL~~~qv~~L~~~~~IY~~~~G--- 105 (420)
+...+.++++.+++++..+|+.|.+.|++.+ |..+. .+..++. + .|++.+++..+-++++|++...+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~ 347 (417)
T 3n0l_A 272 FKFNLSDEWKVYAKQVRTNAQVLANVLMDRK----FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPG 347 (417)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTT
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC----ceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCC
Confidence 4444556778899999999999999998743 33332 1122222 2 25688888888789999986332
Q ss_pred -----------ceeccc-----CCcCCHHHHHHHHHhhC
Q psy16707 106 -----------RISMAG-----VTSKNVGYLAKAIHANG 128 (420)
Q Consensus 106 -----------Rinvag-----l~~~ni~~va~ai~~v~ 128 (420)
||+.++ ++..+|+.++++|.++-
T Consensus 348 ~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l 386 (417)
T 3n0l_A 348 EIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADIL 386 (417)
T ss_dssp CCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 555544 55699999999998873
No 296
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=94.30 E-value=0.31 Score=46.01 Aligned_cols=85 Identities=14% Similarity=0.182 Sum_probs=58.3
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccceee---cCCCHHHHHHHHHhcceEEcC--------
Q psy16707 39 WLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCY---TGLNATQVEKLIKEHSVYLTK-------- 103 (420)
Q Consensus 39 W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~GmFs~---~gL~~~qv~~L~~~~~IY~~~-------- 103 (420)
|.++ ++.++++++.+|+.|.+.|++.+ +..+.. ..+++++ .|.+.+++...-.+++|++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~ 323 (353)
T 2yrr_A 248 VLEEGVAARERRAREVYAWVLEELKARG----FRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPTRGQ 323 (353)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTT----CEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTT
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHCC----CccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCccccCCC
Confidence 4444 78899999999999999998753 333332 2334333 256666665443455999862
Q ss_pred CCceec-ccCCcCCHH-HHHHHHHhh
Q psy16707 104 DGRISM-AGVTSKNVG-YLAKAIHAN 127 (420)
Q Consensus 104 ~GRinv-agl~~~ni~-~va~ai~~v 127 (420)
.-||++ +..+..+++ +++++|.++
T Consensus 324 ~iRi~~~~~~~~~~~~~~~~~~l~~~ 349 (353)
T 2yrr_A 324 VLRLGLMGEGARREAYQAFLKALDRA 349 (353)
T ss_dssp CEEEECSGGGSCHHHHHHHHHHHHHH
T ss_pred eEEEecCccCCHHHHHHHHHHHHHHH
Confidence 237787 457888999 999999875
No 297
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=94.25 E-value=0.23 Score=48.38 Aligned_cols=82 Identities=12% Similarity=0.256 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc------cccceeec--CCCHHHHHHHHHhcceEEcCC----------
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD------QIGMFCYT--GLNATQVEKLIKEHSVYLTKD---------- 104 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~------Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~---------- 104 (420)
++.++++++.+++.|.+.|++.. .+..+.. +.+||++. +.+.+++...-++++|++...
T Consensus 303 ~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~ 379 (420)
T 1t3i_A 303 MENIHNYEVELTHYLWQGLGQIP---QLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRL 379 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCT---TEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CeEEeCCCccccccCCEEEEEECCCCHHHHHHHHHHCCeEEeeccccchHHHHh
Confidence 67888999999999999998752 2444433 35677664 345666665557789998654
Q ss_pred -C-----ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 105 -G-----RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 -G-----Rinvag-l~~~ni~~va~ai~~v 127 (420)
| ||+++. .+.+++++++++|.++
T Consensus 380 ~g~~~~iRis~~~~~~~~~i~~~~~~l~~~ 409 (420)
T 1t3i_A 380 FDASGSARASLYFYNTKEEIDLFLQSLQAT 409 (420)
T ss_dssp TTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence 2 777776 4778999999998876
No 298
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=94.24 E-value=0.12 Score=50.58 Aligned_cols=108 Identities=10% Similarity=0.116 Sum_probs=67.5
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-----cccceeecCCCH
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWL-TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-----QIGMFCYTGLNA 87 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~-~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-----Q~GmFs~~gL~~ 87 (420)
.+++|+..+...+...|. .|. +.++.++++++.+|+.|.+.|++......|..+.. +.+|+++.--+.
T Consensus 279 ~~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 352 (416)
T 1qz9_A 279 LCGTQPITSLAMVECGLD------VFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPEG 352 (416)
T ss_dssp CCSCCCHHHHHHHHHHHH------HHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTTH
T ss_pred cCCCCCHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCCH
Confidence 344566665544444442 121 24777889999999999999987511002333333 346666543344
Q ss_pred HHHHHHHHhcceEEcCCC----ceecc--cCCcCCHHHHHHHHHhh
Q psy16707 88 TQVEKLIKEHSVYLTKDG----RISMA--GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv~~L~~~~~IY~~~~G----Rinva--gl~~~ni~~va~ai~~v 127 (420)
+++...-.+++|++...+ ||+++ ..+..++++++++|.++
T Consensus 353 ~~l~~~l~~~gi~~~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~ 398 (416)
T 1qz9_A 353 YAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEI 398 (416)
T ss_dssp HHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcEeccCCCCeEEEeCcccCCCHHHHHHHHHHHHHH
Confidence 555433346799875322 88887 58899999999999887
No 299
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=94.16 E-value=0.18 Score=48.37 Aligned_cols=85 Identities=9% Similarity=0.209 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecCCCHHHH-HHHHHhcceEEcCCC-----ceeccc
Q psy16707 39 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGLNATQV-EKLIKEHSVYLTKDG-----RISMAG 111 (420)
Q Consensus 39 W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~gL~~~qv-~~L~~~~~IY~~~~G-----Rinvag 111 (420)
....++.+.+++..+|+.|.+.|++.+ +..+. .+.+++++.....+++ +.|. +++|++...+ ||+++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~~Ri~~~~ 377 (397)
T 3f9t_A 303 GREGQRKIVNECMENTLYLYKKLKENN----FKPVIEPILNIVAIEDEDYKEVCKKLR-DRGIYVSVCNCVKALRIVVMP 377 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCCSSSEEEEECTTHHHHHHHHH-HTTCBCEECSSSSEEEEECCT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHCC----CEEEcCCCccEEEEEeCCHHHHHHHHH-hCCeEEeccCCCCEEEEEEcC
Confidence 345567788889999999999999873 23222 4566666655554554 4554 5599987665 888874
Q ss_pred -CCcCCHHHHHHHHHhhC
Q psy16707 112 -VTSKNVGYLAKAIHANG 128 (420)
Q Consensus 112 -l~~~ni~~va~ai~~v~ 128 (420)
.+..+++.++++|.++-
T Consensus 378 ~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 378 HIKREHIDNFIEILNSIK 395 (397)
T ss_dssp TCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhh
Confidence 57799999999998763
No 300
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=94.13 E-value=0.28 Score=46.98 Aligned_cols=102 Identities=15% Similarity=0.157 Sum_probs=65.7
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----ccce---eecCCCHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMF---CYTGLNATQ 89 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q----~GmF---s~~gL~~~q 89 (420)
+|+..+...+...|. ......++.++++++.+|+.|.+.|++.+ +..+..+ .|.| .+.+.+.++
T Consensus 243 ~~~~~~~~a~~~al~-----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (384)
T 3zrp_A 243 TPPVHVILQLAEAFR-----LIEKEGIENRIKRHTMVASAIRAGLEALG----LEIVARRPESYSNTVTGVILKVADPQK 313 (384)
T ss_dssp CCCHHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSCSSGGGBCSSEEEEECSSSCHHH
T ss_pred CCCHHHHHHHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHCC----CeEccCcccccCccEEEEECCCCCHHH
Confidence 666655544443332 11112378999999999999999998873 3333333 3433 233556666
Q ss_pred HHHHHHhcceEEcCCC-------ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKDG-------RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~G-------Rinvag-l~~~ni~~va~ai~~v 127 (420)
+...-.+++|++.... ||++.. .+..++++++++|.++
T Consensus 314 ~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~ 359 (384)
T 3zrp_A 314 VLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERT 359 (384)
T ss_dssp HHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHH
Confidence 5443345599887655 788665 4568899999999887
No 301
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=94.02 E-value=0.08 Score=53.07 Aligned_cols=88 Identities=20% Similarity=0.255 Sum_probs=59.9
Q ss_pred CCchHHHHHHHHHHHccCCCCCCCCCCC--CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeec
Q psy16707 177 PYVLPSVKQADEIVLNKNLDKEYAPIIG--APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQG 254 (420)
Q Consensus 177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G--~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt 254 (420)
++.++.+.++..........+.|....+ ..+|++++++++ |.. . . +.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-g~~------~---~--------------------v~~ 79 (421)
T 2ctz_A 30 SYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALE-GGK------A---A--------------------LAT 79 (421)
T ss_dssp CBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHH-TCS------E---E--------------------EEE
T ss_pred eeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHh-CCC------c---e--------------------EEe
Confidence 4566777777655432223567775543 478999999876 322 1 1 446
Q ss_pred ccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCc
Q psy16707 255 ISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGL 297 (420)
Q Consensus 255 ~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~ 297 (420)
.+||.|+..++..+ +.| ||.|++++|+|+.+...+ +..|+
T Consensus 80 ~sGt~A~~~~l~~~--~~~-gd~vi~~~~~~~~~~~~~~~~~~~~g~ 123 (421)
T 2ctz_A 80 ASGHAAQFLALTTL--AQA-GDNIVSTPNLYGGTFNQFKVTLKRLGI 123 (421)
T ss_dssp SSHHHHHHHHHHHH--CCT-TCEEEECSCCCHHHHHHHHTHHHHTTC
T ss_pred cCHHHHHHHHHHHH--hCC-CCEEEEeCCCchHHHHHHHHHHHHcCC
Confidence 67799999888755 457 999999999999877665 44554
No 302
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=93.99 E-value=0.04 Score=55.72 Aligned_cols=82 Identities=16% Similarity=0.256 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCCC----cEEEc-cc
Q psy16707 336 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKDG----RISMA-GV 403 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl 403 (420)
.+.++++++++.+.+.|+++ +.+..+.. ....|+|+++.++ .+.++.|+ ++||++.|+| ||+++ ..
T Consensus 352 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~~iRi~~~~~~ 429 (449)
T 2cjg_A 352 GLFERAVQHGKYLRARLDELAADFPAVVLD-PRGRGLMCAFSLPTTADRDELIRQLW-QRAVIVLPAGADTVRFRPPLTV 429 (449)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHSTTTSEE-EEEETTEEEEECSSHHHHHHHHHHHH-HTTEECEEETTTEEEECCCTTC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceee-EeeccEEEEEEECChHHHHHHHHHHH-HCCeEEecCCCCEEEEECCCCC
Confidence 45578888888888888875 22210112 2345767665443 24557776 6899999865 88654 36
Q ss_pred CCCCHHHHHHHHHHHh
Q psy16707 404 TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 404 ~~~ni~~la~AI~~vv 419 (420)
+.++|+.+.++|.+++
T Consensus 430 t~e~i~~~l~~l~~~l 445 (449)
T 2cjg_A 430 STAEIDAAIAAVRSAL 445 (449)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8889999999998875
No 303
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=93.97 E-value=0.071 Score=53.40 Aligned_cols=73 Identities=19% Similarity=0.277 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHhcCCCCCCcccCCCCceEEecC-------CC------HHHHHHHHHhCCeEEeC------------C--
Q psy16707 343 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-------LN------ATQVEKLIKEHSVYLTK------------D-- 395 (420)
Q Consensus 343 ~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~-------l~------~~~v~~Ll~e~~Vy~~p------------~-- 395 (420)
++++.+.+.|++.| +..+.++.|+|.|.. ++ .+.+++|++++||++.| +
T Consensus 330 ~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~ 405 (467)
T 1ax4_A 330 GQVKYLGDRLREAG----IPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQ 405 (467)
T ss_dssp HHHHHHHHHHHHTT----CCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSB
T ss_pred HHHHHHHHHHHhCC----CCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccc
Confidence 55677888888755 555567788888765 32 24557776899999976 2
Q ss_pred -----C--cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707 396 -----G--RISMAG--VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 -----g--Ris~ag--l~~~ni~~la~AI~~vv 419 (420)
+ ||+++. ++.+.+++++++|.+++
T Consensus 406 ~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 438 (467)
T 1ax4_A 406 KHADMEFMRLTIARRVYTNDHMDYIADALIGLK 438 (467)
T ss_dssp CCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTH
T ss_pred cccccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence 3 888872 67788999999998764
No 304
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=93.94 E-value=0.12 Score=49.36 Aligned_cols=99 Identities=16% Similarity=0.194 Sum_probs=69.9
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHH-HHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NAT-QVE 91 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~-qv~ 91 (420)
.+++..+...+...|.+. + .++.++++++..|+.|.+.|++.. .+.++....|+|.+..+ +.+ -++
T Consensus 245 ~~~~~~~~~~~~~~l~~~----~---~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~ 314 (361)
T 3ftb_A 245 WNINCFAEMAAINCLKDT----N---YIEESLLWIKKERKRFIEELNKIG---FIKRVFSPHANFVLCRLENISGEKLYD 314 (361)
T ss_dssp TCSCHHHHHHHHHTSSCH----H---HHHHHHHHHHHHHHHHHHHHHHSS---SEEEEECCSSSEEEEEESSSCHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCH----H---HHHHHHHHHHHHHHHHHHHHHhCC---CCceecCCCCeEEEEEcCCCCHHHHHH
Confidence 367778888888888862 3 466778899999999999998752 24434556677765544 344 456
Q ss_pred HHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 92 KLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 92 ~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.|.++ +|++.+ .| ||+++ ++.+++.+.+++..+
T Consensus 315 ~l~~~-gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~ 357 (361)
T 3ftb_A 315 SLLKE-DIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGV 357 (361)
T ss_dssp HHHTT-TEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred HHHHC-CeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence 67655 999864 24 66665 677889999998875
No 305
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=93.91 E-value=0.062 Score=52.84 Aligned_cols=103 Identities=8% Similarity=0.071 Sum_probs=68.5
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-C----CH
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-L----NA 87 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-L----~~ 87 (420)
..|+++|..+...+...|.+. +++.++++++..|+.|.+.|++.+ |.....+.|+|.+.- + +.
T Consensus 272 ~~~~~~~~~~~~a~~~~l~~~--------~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~ 339 (400)
T 3asa_A 272 TTFNGASIPAQEAGVAGLSIL--------PQLEAIHYYRENSDLLRKALLATG----FEVFGGEHAPYLWVKPTQANISD 339 (400)
T ss_dssp HHCCCCCHHHHHHHHHHHHHT--------TTCHHHHHHHHHHHHHHHHHHHTT----CEEEECSSSSEEEEECCCTTCCT
T ss_pred cCccCCChHHHHHHHHHhCcH--------HHHHHHHHHHHHHHHHHHHHHHCC----CeeeCCCCceEEEEeccCCCCCH
Confidence 446667777777777777542 466788899999999999998763 444444567876654 3 23
Q ss_pred -HHHHHHHHhcceEEcC--------CCceecc-cCCcCCHHHHHHHHHhh
Q psy16707 88 -TQVEKLIKEHSVYLTK--------DGRISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 -~qv~~L~~~~~IY~~~--------~GRinva-gl~~~ni~~va~ai~~v 127 (420)
+-++.|.++++|++.+ .+.|-|+ ..+..+++...++|.++
T Consensus 340 ~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~ 389 (400)
T 3asa_A 340 RDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMA 389 (400)
T ss_dssp TTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHH
Confidence 4566788888998863 3434343 34667788777777665
No 306
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=93.90 E-value=0.48 Score=49.23 Aligned_cols=89 Identities=17% Similarity=0.291 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc---CCCCceEEe----cCCCHHHHHHHHHhCCeEEeC----
Q psy16707 326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCY----TGLNATQVEKLIKEHSVYLTK---- 394 (420)
Q Consensus 326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i---~~q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p---- 394 (420)
+++.+..+.+.+.+.+.+.-++|.+.|.+.|. ..+ +... ++.+ .|++-..++.++++.||-+-+
T Consensus 325 f~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~----~vvsGgTdnH-lvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP 399 (490)
T 3ou5_A 325 LKQACTPMFREYSLQVLKNARAMADALLERGY----SLVSGGTDNH-LVLVDLRPKGLDGARAERVLELVSITANKNTCP 399 (490)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC----EEGGGSCSSS-EEEEECGGGTCCHHHHHHHHHHTTEECEEECCT
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCC----eeecCCCCce-EEEEeccccCCCHHHHHHHHHHcCcEECCCCCC
Confidence 44555667778888888888999999999984 333 2221 3332 367788899999999998843
Q ss_pred --------CC-cEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707 395 --------DG-RISMAG-----VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 --------~g-Ris~ag-----l~~~ni~~la~AI~~vv 419 (420)
+| ||.-.. +.++.++.+|+-|++++
T Consensus 400 ~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l 438 (490)
T 3ou5_A 400 GDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp TCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 23 887664 45677899999998875
No 307
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=93.79 E-value=0.049 Score=52.29 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=67.2
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CH-HHH
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NA-TQV 90 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~-~qv 90 (420)
..+++..+..++...|.+.+ .|.++++.+. ..|+.|.+.|++. + .+.. ....|+|.+.-+ +. +-+
T Consensus 225 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~----~~~~~l~~~L~~~--~-~~~~-~~~~~~~~~~~~~~~~~~~l~ 293 (350)
T 3fkd_A 225 PWAVNALAIEAAKFILIHPA---QFTLPIRKWQ----RNTVDFITALNRL--D-GVEV-HPSGTTFFLLRLKKGTAAELK 293 (350)
T ss_dssp TTCSCHHHHHHHHHHHHCTT---TTCCCHHHHH----HHHHHHHHHHHHS--T-TEEE-CCCSSSEEEEEESSSCHHHHH
T ss_pred CCCCCHHHHHHHHHHHhCHH---HHHHHHHHHH----HHHHHHHHHHhcC--C-CcEE-CCCCCcEEEEECCCCCHHHHH
Confidence 34677778888888887754 4555554443 6688888888775 2 2333 345677765444 33 446
Q ss_pred HHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 91 EKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 91 ~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
+.|.++++|++.+ .+ ||+++ ++.+++.+.+++.++
T Consensus 294 ~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~ 338 (350)
T 3fkd_A 294 KYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETF 338 (350)
T ss_dssp HHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence 6787779999864 23 77765 667899999999887
No 308
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=93.69 E-value=0.49 Score=45.76 Aligned_cols=101 Identities=18% Similarity=0.249 Sum_probs=63.6
Q ss_pred CccchHHHHHHHHhCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cceee---cCCCHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCY---TGLNAT 88 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~-el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----GmFs~---~gL~~~ 88 (420)
+++..+...+...|. . +.+ .++.++++++.+|+.|.+.|++.+ |..+..+. +++++ .|.+.+
T Consensus 272 ~~~~~~~~a~~~al~-----~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (393)
T 1vjo_A 272 TAPINLYYALREALR-----L-IAQEGLANCWQRHQKNVEYLWERLEDIG----LSLHVEKEYRLPTLTTVCIPDGVDGK 341 (393)
T ss_dssp CCCHHHHHHHHHHHH-----H-HHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCTTCCHH
T ss_pred CCCHHHHHHHHHHHH-----H-HHHccHHHHHHHHHHHHHHHHHHHHHcC----CcccCCccccCCcEEEEEcCCCCCHH
Confidence 555555554444443 1 223 378889999999999999998863 33333221 23332 256666
Q ss_pred HH-HHHHHhcceEEcC------CC--ceecccCC--cCCHHHHHHHHHhh
Q psy16707 89 QV-EKLIKEHSVYLTK------DG--RISMAGVT--SKNVGYLAKAIHAN 127 (420)
Q Consensus 89 qv-~~L~~~~~IY~~~------~G--Rinvagl~--~~ni~~va~ai~~v 127 (420)
++ +.|.++++|++.+ .+ ||++.+++ ..+++.++++|.++
T Consensus 342 ~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~ 391 (393)
T 1vjo_A 342 AVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQV 391 (393)
T ss_dssp HHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHH
Confidence 55 5677777999853 23 66754543 34699999998875
No 309
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=93.66 E-value=0.25 Score=47.38 Aligned_cols=102 Identities=20% Similarity=0.308 Sum_probs=66.5
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----ccc--eeecCCCHHH
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGM--FCYTGLNATQ 89 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q----~Gm--Fs~~gL~~~q 89 (420)
.+++..+...+...|.+ |.+.++.++++++..|+.|.+.|++.+ +..+... .++ |.+.+.+.++
T Consensus 237 ~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (384)
T 1eg5_A 237 GTQNVPGIVGAARAMEI------AVEELSEAAKHMEKLRSKLVSGLMNLG----AHIITPLEISLPNTLSVSFPNIRGST 306 (384)
T ss_dssp SCCCHHHHHHHHHHHHH------HHHTHHHHHHHHHHHHHHHHHHHHTTT----CEECSCTTSBCTTEEEEECTTCCHHH
T ss_pred CCCChHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHhCCCC----eEEeCCcccCCCCEEEEEeCCCCHHH
Confidence 35555555555544432 445688899999999999999998732 3333321 123 3334667766
Q ss_pred HHHHHHhcceEEcCC-------------------------C--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKD-------------------------G--RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~-------------------------G--Rinvag-l~~~ni~~va~ai~~v 127 (420)
+...-.+++|++... + ||+++. .+..++++++++|.++
T Consensus 307 ~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 372 (384)
T 1eg5_A 307 LQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEI 372 (384)
T ss_dssp HHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 654446789998752 2 777664 6788999999998876
No 310
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=93.51 E-value=0.21 Score=50.06 Aligned_cols=103 Identities=19% Similarity=0.304 Sum_probs=69.7
Q ss_pred ccCCCchHHHHHHHHHhCChhhHHHHH-HH--HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC----CCCce---EEe
Q psy16707 305 FYSSPPIHGARIVQEILGDPKLKAQWL-TE--VKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT----DQIGM---FCY 373 (420)
Q Consensus 305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~-~e--l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~----~q~Gm---F~~ 373 (420)
.+.+||..+.......| +|. ++ ++.+.+|.++.++.+++.|+++ |. ...+ .+.++ |..
T Consensus 246 ~~~Tp~v~~i~~l~~al-------~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~----~~~~~~~~~rs~~ivsf~~ 314 (377)
T 3e77_A 246 LYNTPPCFSIYVMGLVL-------EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGF----YVCPVEPQNRSKMNIPFRI 314 (377)
T ss_dssp CSSCCCHHHHHHHHHHH-------HHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTS----EECCSCGGGBCSSEEEEEE
T ss_pred CCCCchHHHHHHHHHHH-------HHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCc----eecCCCHHHcCCcEEEEEc
Confidence 46788887776555433 243 33 6888899999999999999987 42 2111 23444 333
Q ss_pred cCCC------HHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 374 TGLN------ATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 374 ~~l~------~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
-+.+ .++++.| +++||++.+| | |+|+..- +.++|+.+.++|++++
T Consensus 315 ~~~~~~~~~~~~~l~~l-~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~ 372 (377)
T 3e77_A 315 GNAKGDDALEKRFLDKA-LELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFL 372 (377)
T ss_dssp SSTTCCHHHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCchhHHHHHHHHH-HHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 3432 2344555 4789999775 3 9999865 6788999999999875
No 311
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=93.41 E-value=0.21 Score=49.74 Aligned_cols=105 Identities=14% Similarity=0.281 Sum_probs=69.2
Q ss_pred hccCCCchHHHHHHHHHhCChhhHHHHH-HH--HHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccc-C--CC-CceEEe--
Q psy16707 304 AFYSSPPIHGARIVQEILGDPKLKAQWL-TE--VKGMADRIISMRQSLKDNLQKEGSNKPW-NHI-T--DQ-IGMFCY-- 373 (420)
Q Consensus 304 ~~~s~pp~~ga~iv~~IL~dp~L~~~w~-~e--l~~m~~r~~~~R~~l~~~L~~~g~~~~w-~~i-~--~q-~GmF~~-- 373 (420)
..+.+||.++.......| +|. ++ ++.+.+|.++.++.+++.|++++. + ... . .+ .+..++
T Consensus 233 ~~~~Tp~v~~i~~l~~al-------~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g---~~~~~~~~~~rs~~ivsf~~ 302 (361)
T 3m5u_A 233 SLFNTPPTFAIYMFNLEM-------DWLLNQGGLDKVHEKNSQKATMLYECIDLSNG---FYKGHADKKDRSLMNVSFNI 302 (361)
T ss_dssp TCSSCCCHHHHHHHHHHH-------HHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTT---SEEESSCGGGBCSSEEEEEE
T ss_pred CCCCCccHHHHHHHHHHH-------HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCC---eeeccCCHHHcCCeEEEEEC
Confidence 345678877776554433 232 33 677789999999999999998761 2 111 1 12 234443
Q ss_pred cC---CCHHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 374 TG---LNATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 374 ~~---l~~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
-+ ++++.+.. ++++||++.+| | |||+.+- +.++|+++.++|+++.
T Consensus 303 ~~~~~~~~~~~~~-L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~ 357 (361)
T 3m5u_A 303 AKNKDLEPLFVKE-AEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQ 357 (361)
T ss_dssp SSCTTHHHHHHHH-HHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCchhhhHHHHHH-HHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 22 33444544 47889999775 3 9998865 6788999999998865
No 312
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=93.37 E-value=0.25 Score=47.48 Aligned_cols=81 Identities=17% Similarity=0.266 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--ccccceeec--CCCHHHH-HHHHHhcceEEcCCC--------ceec
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCYT--GLNATQV-EKLIKEHSVYLTKDG--------RISM 109 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~Q~GmFs~~--gL~~~qv-~~L~~~~~IY~~~~G--------Rinv 109 (420)
++.+++++..+|+.|.+.|++.+ +.... ...++|.+. |.+.+++ +.|.++++|.+.+.. ||++
T Consensus 276 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~ 351 (376)
T 3f0h_A 276 ADAEVARIASQAADFRAKIKDLP----FELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGH 351 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSS----EEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEec
Confidence 78899999999999999998764 22222 234555554 6666654 678888899885432 7777
Q ss_pred c-cCCcCCHHHHHHHHHhh
Q psy16707 110 A-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 110 a-gl~~~ni~~va~ai~~v 127 (420)
. ..+..+++.++++|.++
T Consensus 352 ~~~~t~e~i~~~~~~l~~~ 370 (376)
T 3f0h_A 352 IGALTHEDNTTLVNAFKDL 370 (376)
T ss_dssp CSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 5 46889999999999886
No 313
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=93.14 E-value=0.47 Score=46.10 Aligned_cols=103 Identities=16% Similarity=0.234 Sum_probs=65.8
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc---cc-ceeec---CCC
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IG-MFCYT---GLN 86 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q---~G-mFs~~---gL~ 86 (420)
+.+++..+..-+...| +.+.++ ++.++++++.+|+.|.+.|++.+ +..+..+ .| ++++. +.+
T Consensus 265 ~~~~~~~~~~a~~~al------~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~ 334 (416)
T 3isl_A 265 HHTEATTMLYALREGV------RLVLEEGLETRFERHRHHEAALAAGIKAMG----LRLFGDDSCKMPVVTCVEIPGGID 334 (416)
T ss_dssp SSCCCHHHHHHHHHHH------HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBCSCGGGBCTTEEEEECCTTCC
T ss_pred CCCCCHHHHHHHHHHH------HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC----CEeccCccccCCcEEEEeCCCCCC
Confidence 4456655544443333 223344 88999999999999999998853 3333322 23 33332 556
Q ss_pred HHH-HHHHHHhcceEEcC------CC--ceeccc-CCcCC-HHHHHHHHHhh
Q psy16707 87 ATQ-VEKLIKEHSVYLTK------DG--RISMAG-VTSKN-VGYLAKAIHAN 127 (420)
Q Consensus 87 ~~q-v~~L~~~~~IY~~~------~G--Rinvag-l~~~n-i~~va~ai~~v 127 (420)
.++ ++.|.++++|++.. .+ ||++.+ .++.+ +++++++|.++
T Consensus 335 ~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~ 386 (416)
T 3isl_A 335 GESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAV 386 (416)
T ss_dssp HHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHH
Confidence 655 45687888999863 22 778755 45556 99999998876
No 314
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=93.11 E-value=0.99 Score=46.37 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=29.3
Q ss_pred HHHHHhCCeEEeCCCcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 382 EKLIKEHSVYLTKDGRISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 382 ~~Ll~e~~Vy~~p~gRis~ag-l~~~ni~~la~AI~~vv 419 (420)
..| .+.|||+.|.+++.++- +++++||.+.+++++++
T Consensus 406 ~~l-l~~Gv~~~p~~~~~~s~~~T~~dId~~l~al~~~l 443 (454)
T 4ao9_A 406 FHL-LNEDIYSSPRGFVVLSLPLTDADIDRYVAAIGSFI 443 (454)
T ss_dssp HHH-HHTTEECCTTCEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred HHH-HHCCEEEcCCCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 445 47799999999765432 68899999999999886
No 315
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=93.11 E-value=0.092 Score=53.66 Aligned_cols=82 Identities=11% Similarity=0.099 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCCC----cEEEc-cc
Q psy16707 336 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKDG----RISMA-GV 403 (420)
Q Consensus 336 ~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl 403 (420)
.+.++++++++.|.+.|+++ +.|..+..+ ...|+|+++.+. .++++.|+ ++||++.|+| ||+++ ..
T Consensus 375 ~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~~~iRi~~~~~~ 452 (472)
T 1ohv_A 375 DLLSNAAHAGKVLLTGLLDLQARYPQFISRV-RGRGTFCSFDTPDESIRNKLISIAR-NKGVMLGGCGDKSIRFRPTLVF 452 (472)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EEETTEEEEECSSHHHHHHHHHHHH-HTTEECEEETTTEEEECCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cCCceEEEEEeCChhHHHHHHHHHH-HCCeEEecCCCCEEEEECCCCC
Confidence 45678888888888888775 322112222 234666665442 24556775 6899999864 78665 46
Q ss_pred CCCCHHHHHHHHHHHh
Q psy16707 404 TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 404 ~~~ni~~la~AI~~vv 419 (420)
++++|+.+.++|.+++
T Consensus 453 t~e~i~~~~~~l~~~l 468 (472)
T 1ohv_A 453 RDHHAHLFLNIFSDIL 468 (472)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 7889999999998875
No 316
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=93.09 E-value=0.11 Score=49.49 Aligned_cols=81 Identities=12% Similarity=0.110 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHhcceEEcC-----CC--ceecc-cCCc
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK-----DG--RISMA-GVTS 114 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~~~IY~~~-----~G--Rinva-gl~~ 114 (420)
++.++++++.+|+.|.+.|+.. .|..+..+.|+|.+..++.+-+++|.++|+|++.. .+ ||+++ ..+.
T Consensus 266 ~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~ 341 (359)
T 1svv_A 266 FFELGAHSNKMAAILKAGLEAC----GIRLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEE 341 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT----TCCBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHHHHhccC----CeEEccCCccceEEEEcCHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCH
Confidence 3567888888999999988422 35555567788888888888888998888998743 12 66654 4678
Q ss_pred CCHHHHHHHHHhh
Q psy16707 115 KNVGYLAKAIHAN 127 (420)
Q Consensus 115 ~ni~~va~ai~~v 127 (420)
++++.++++|.++
T Consensus 342 ~~i~~~~~~l~~~ 354 (359)
T 1svv_A 342 KECHRFVEVLKRL 354 (359)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 317
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=92.95 E-value=0.29 Score=47.28 Aligned_cols=83 Identities=13% Similarity=0.194 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccceeec--CCCHHHHHHHHHhcceEEcCC-------------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--GLNATQVEKLIKEHSVYLTKD------------- 104 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~--Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~------------- 104 (420)
.++.++++++.+|+.|.+.|++. + .+..+.. +.|||++. +.+.+++...-.+++|++.+.
T Consensus 298 ~~~~~~~~~~~~~~~l~~~L~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~ 374 (406)
T 1kmj_A 298 GLNNIAEYEQNLMHYALSQLESV--P-DLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNV 374 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTS--T-TEEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC--C-CeEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcCC
Confidence 36678889999999999999875 2 2554554 66777664 456666665557779987531
Q ss_pred -C--ceecccC-CcCCHHHHHHHHHhh
Q psy16707 105 -G--RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 -G--Rinvagl-~~~ni~~va~ai~~v 127 (420)
+ ||+++.. +..++++++++|.++
T Consensus 375 ~~~iRis~~~~~t~~~i~~~~~~l~~~ 401 (406)
T 1kmj_A 375 PAMCRASLAMYNTHEEVDRLVTGLQRI 401 (406)
T ss_dssp SCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence 2 7787765 778999999998875
No 318
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=92.83 E-value=0.082 Score=53.75 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=34.8
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH----HHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP----ICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~----i~~~aG~~ 298 (420)
+.+.+|+.|+.+++..+ +.| ||.|++++|+|+.+.. .++..|++
T Consensus 101 v~~~sG~~Ai~~al~al--~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 148 (430)
T 3ri6_A 101 LALGSGMAAISTAILTL--ARA-GDSVVTTDRLFGHTLSLFQKTLPSFGIE 148 (430)
T ss_dssp EEESCHHHHHHHHHHHH--CCT-TCEEEEETTCCHHHHHHHHTHHHHTTCE
T ss_pred EEECCHHHHHHHHHHHH--hCC-CCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence 55778999998887644 557 9999999999998887 55566765
No 319
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=92.81 E-value=0.38 Score=48.17 Aligned_cols=107 Identities=17% Similarity=0.207 Sum_probs=71.0
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CCCCCccccccccc---eeecCC
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTE---VKGMADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGM---FCYTGL 85 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~e---l~~m~~Ri~~~R~~l~~~L~~~~-~~~~w~~i~~Q~Gm---Fs~~gL 85 (420)
..|-+||..|..-...-|. |..+ ++.+.+|.+.+++.|++.|++.. ..-.-..-..+.++ |.+-|.
T Consensus 245 ~~~~Tp~v~~i~~l~~al~-------~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~ 317 (377)
T 3e77_A 245 SLYNTPPCFSIYVMGLVLE-------WIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNA 317 (377)
T ss_dssp TCSSCCCHHHHHHHHHHHH-------HHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESST
T ss_pred CCCCCchHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCC
Confidence 3577899888766655443 5543 78999999999999999998762 11000011234566 666676
Q ss_pred CH-H-----HHHHHHHhcceEEcCC------CceecccC-CcCCHHHHHHHHHhh
Q psy16707 86 NA-T-----QVEKLIKEHSVYLTKD------GRISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~-~-----qv~~L~~~~~IY~~~~------GRinvagl-~~~ni~~va~ai~~v 127 (420)
.+ + -++.|. +++|++.+. =||++.+- +..+||+++++|.++
T Consensus 318 ~~~~~~~~~~l~~l~-~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~ 371 (377)
T 3e77_A 318 KGDDALEKRFLDKAL-ELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKF 371 (377)
T ss_dssp TCCHHHHHHHHHHHH-HTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHH-HCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 54 2 234443 679887532 27887775 568999999999876
No 320
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=92.80 E-value=0.23 Score=49.87 Aligned_cols=106 Identities=14% Similarity=0.164 Sum_probs=65.5
Q ss_pred cCCCchHHHHHHHHHhCChhhHHHHH-HH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC-ceEEe--c--CCC
Q psy16707 306 YSSPPIHGARIVQEILGDPKLKAQWL-TE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI-GMFCY--T--GLN 377 (420)
Q Consensus 306 ~s~pp~~ga~iv~~IL~dp~L~~~w~-~e--l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~-GmF~~--~--~l~ 377 (420)
+.+||..+.......| +|. ++ ++.+.+|.++.++.+++.|+++|.-.....-.... +..++ - +++
T Consensus 262 ~gTp~v~~i~~l~~Al-------~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~ 334 (386)
T 3qm2_A 262 FNTPPTFAWYLSGLVF-------KWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD 334 (386)
T ss_dssp ----CCSHHHHHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHH-------HHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc
Confidence 3467766665444323 232 33 67888999999999999999886311110011122 33333 2 244
Q ss_pred HHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 378 ATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 378 ~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv 419 (420)
++++..| +++||.+.+| | |||+..- +.++|+++.++|+++.
T Consensus 335 ~~~~~~L-~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~ 382 (386)
T 3qm2_A 335 KVFLEES-FAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFE 382 (386)
T ss_dssp HHHHHHH-HHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 5556665 7889998765 2 9998765 6788999999999875
No 321
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=92.68 E-value=0.29 Score=47.36 Aligned_cols=81 Identities=15% Similarity=0.258 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----CHHHHHHHHHhcceEEc-------CCC---
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NATQVEKLIKEHSVYLT-------KDG--- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-----~~~qv~~L~~~~~IY~~-------~~G--- 105 (420)
+.++.++++++..|+.|.+.|++.+ |..+..+.+|+++ -+ ..+-++.|.+ ++|++. +.|
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~ 368 (399)
T 3tqx_A 295 TEGPQLRKQLQENSRYFRAGMEKLG----FQLVPGNHPIIPV-MLGDAQLATNMADHLLQ-EGIYVVGFSYPVVPMGKAR 368 (399)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSSSEEEE-EEECHHHHHHHHHHHHH-TTEECCEECTTTSCTTCEE
T ss_pred hccHHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEE-EeCCHHHHHHHHHHHHH-CCCEEeeeCCCCCCCCCce
Confidence 5578899999999999999999874 4444444444444 22 2344566765 699987 333
Q ss_pred -ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 106 -RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 -Rinva-gl~~~ni~~va~ai~~v 127 (420)
||+++ ..+..+++.++++|.++
T Consensus 369 iRi~~~~~~~~~~i~~~~~~l~~~ 392 (399)
T 3tqx_A 369 IRVQMSAVHTQQQLDRAIEAFGQV 392 (399)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCHHHHHHHHHHHHHH
Confidence 88887 67889999999998876
No 322
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=92.45 E-value=0.075 Score=53.16 Aligned_cols=77 Identities=14% Similarity=0.160 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------C-HHH-----HHHHHHhCCeEEeC-C---------
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------N-ATQ-----VEKLIKEHSVYLTK-D--------- 395 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~-~~~-----v~~Ll~e~~Vy~~p-~--------- 395 (420)
++..+..+.+.+.|++.| +..+.+..|+|.|..+ + .++ +++|++++||.+.+ +
T Consensus 316 ~~~~~~~~~l~~~L~~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~ 391 (456)
T 2ez2_A 316 EHRVKQVRYLGDKLKAAG----VPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNV 391 (456)
T ss_dssp HHHHHHHHHHHHHHHHTT----CCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTT
T ss_pred HHHHHHHHHHHHHHhcCC----CccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCcc
Confidence 444555667777887766 4555667788887432 2 234 56666888998643 1
Q ss_pred ---------C--cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707 396 ---------G--RISMAG--VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ---------g--Ris~ag--l~~~ni~~la~AI~~vv 419 (420)
+ ||+++. .+.+++++++++|.+++
T Consensus 392 ~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l 428 (456)
T 2ez2_A 392 TGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLY 428 (456)
T ss_dssp TCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 2 888875 68889999999998764
No 323
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=92.36 E-value=0.21 Score=48.71 Aligned_cols=84 Identities=13% Similarity=0.212 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-ccc-ceee----cCCCHHHHHHHHHhcceEEcCC---------
Q psy16707 40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIG-MFCY----TGLNATQVEKLIKEHSVYLTKD--------- 104 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-Q~G-mFs~----~gL~~~qv~~L~~~~~IY~~~~--------- 104 (420)
.++++.+++++..+++.|.+.|++.+ |..+.. ..+ ++.. .+++.+++..+-++++|++.+.
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~ 359 (420)
T 3gbx_A 284 EPEFKVYQQQVAKNAKAMVEVFLNRG----YKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSP 359 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCT
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHhcC----CeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCcccc
Confidence 45567888899999999999998743 444432 223 3332 2567888877668889998761
Q ss_pred -----Cceeccc-----CCcCCHHHHHHHHHhh
Q psy16707 105 -----GRISMAG-----VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 -----GRinvag-----l~~~ni~~va~ai~~v 127 (420)
=||+++. +++..++.++++|.++
T Consensus 360 ~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~ 392 (420)
T 3gbx_A 360 FVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDV 392 (420)
T ss_dssp TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCcceEEecchhcccCCCHHHHHHHHHHHHHH
Confidence 3666654 4568899999998887
No 324
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=92.15 E-value=0.65 Score=45.21 Aligned_cols=81 Identities=19% Similarity=0.183 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC---CCHHHH-HHHHHhcceEEc-------CCC----ce
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG---LNATQV-EKLIKEHSVYLT-------KDG----RI 107 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g---L~~~qv-~~L~~~~~IY~~-------~~G----Ri 107 (420)
++.++++++..|..|.+.|++.+ |..+..+.|++++.- .+.+++ +.|.++++|++. +.| ||
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRi 375 (401)
T 2bwn_A 300 GQKLRDAQQMHAKVLKMRLKALG----MPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRF 375 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHCC----CcccCCCCCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEE
Confidence 47788899999999999998763 344444556666642 223344 467668899984 223 78
Q ss_pred eccc-CCcCCHHHHHHHHHhh
Q psy16707 108 SMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 108 nvag-l~~~ni~~va~ai~~v 127 (420)
+++. .+.++++.++++|.++
T Consensus 376 s~~~~~t~~~i~~~~~~l~~~ 396 (401)
T 2bwn_A 376 TPSPVHDLKQIDGLVHAMDLL 396 (401)
T ss_dssp CCCTTSCHHHHHHHHHHHHHH
T ss_pred EeeCCCCHHHHHHHHHHHHHH
Confidence 8874 4678999999999887
No 325
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=91.36 E-value=0.027 Score=55.23 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=66.5
Q ss_pred CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----HH-H
Q psy16707 16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----AT-Q 89 (420)
Q Consensus 16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-----~~-q 89 (420)
++++..+...+...|.+. ..| ++.++++++..|+.|.+.|++.- + .|..+..+.|||.+.-+. .+ -
T Consensus 271 ~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~l~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~l 342 (392)
T 3b1d_A 271 HEVSSLGYIATETAYRYG---KPW---LVALKAVLEENIQFAVEYFAQEA-P-RLKVMKPQGTYLIWLDFSDYGLTDDAL 342 (392)
Confidence 455666666666667642 334 66778888889999998887621 2 255566677887765443 22 3
Q ss_pred HHHHHHhcceEEcCC----------CceecccCCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~v 127 (420)
++.|.++++|++.+. =||+++. +..+++..+++|.++
T Consensus 343 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~ 389 (392)
T 3b1d_A 343 FTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCC 389 (392)
Confidence 456767889998642 2677665 566777777766554
No 326
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=91.91 E-value=0.2 Score=47.61 Aligned_cols=44 Identities=14% Similarity=0.198 Sum_probs=34.1
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh----hcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK----HTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~----~aG~~ 298 (420)
+.+.+||.|+.+++..+ +.| ||.|++++|+|+.+...++ ..|++
T Consensus 17 i~~~sG~~a~~~~~~~~--~~~-g~~v~~~~~~~~~~~~~~~~~~~~~g~~ 64 (331)
T 1pff_A 17 AATASGMGAIAASVWTF--LKA-GDHLISDDCLYGCTHALFEHQLRKFGVE 64 (331)
T ss_dssp EEESSHHHHHHHHHHHH--CCT-TCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCCcchHHHHHHHHHHhcCCE
Confidence 45677799999988754 457 8999999999999877653 35654
No 327
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=91.79 E-value=0.085 Score=52.82 Aligned_cols=76 Identities=18% Similarity=0.198 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CH-HH-----HHHHHHhCCeEEeC-C---------
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NA-TQ-----VEKLIKEHSVYLTK-D--------- 395 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~-~~-----v~~Ll~e~~Vy~~p-~--------- 395 (420)
++..++++.+.+.|++.| +..+ ++.|++.|+.+ +. ++ ++.|++++||++.| +
T Consensus 328 ~~~~~~~~~l~~~L~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~ 402 (467)
T 2oqx_A 328 AYRIAQVQYLVDGLEEIG----VVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPK 402 (467)
T ss_dssp HHHHHHHHHHHHHHHHTT----CCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTT
T ss_pred HHHHHHHHHHHHHHHHCC----Ceee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceeccccccccccccc
Confidence 445677888899998875 4545 56777777533 21 22 56776889999976 2
Q ss_pred ---------C--cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707 396 ---------G--RISMAG--VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ---------g--Ris~ag--l~~~ni~~la~AI~~vv 419 (420)
+ ||+++. .++++|+++.++|.+++
T Consensus 403 ~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l 439 (467)
T 2oqx_A 403 TGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVK 439 (467)
T ss_dssp TCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHH
T ss_pred ccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 3 788773 57788999999998765
No 328
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=91.61 E-value=0.3 Score=47.04 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=67.5
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKL 93 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L 93 (420)
+++..+...+...|.+. .| ++.++++++..|+.|.+.|++. ++ +.. ....|+|.+..+. .+-++.|
T Consensus 247 ~~~~~~~~~~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~--~~-~~~-~~~~g~~~~~~~~~~~~~l~~~l 315 (364)
T 1lc5_A 247 SVNALAALAGEVALQDS----AW---QQATWHWLREEGARFYQALCQL--PL-LTV-YPGRANYLLLRCEREDIDLQRRL 315 (364)
T ss_dssp CSCHHHHHHHHHGGGCH----HH---HHHHHHHHHHHHHHHHHHHHTS--TT-EEE-CCCSSSEEEEEESCTTCCHHHHH
T ss_pred CCCHHHHHHHHHHHhCc----HH---HHHHHHHHHHHHHHHHHHHhcC--CC-CEE-CCCCCeEEEEECCCcHHHHHHHH
Confidence 45666777888888872 33 6677888999999999999865 22 443 3456777665543 2456677
Q ss_pred HHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 94 IKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 94 ~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
. +++|++.+ .+ ||+++ +..+++.+.+++.++
T Consensus 316 ~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~ 356 (364)
T 1lc5_A 316 L-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNV 356 (364)
T ss_dssp H-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred H-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHH
Confidence 6 45999864 23 67765 467889999999887
No 329
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=91.57 E-value=0.79 Score=43.56 Aligned_cols=85 Identities=13% Similarity=0.152 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----cccee--ecCCCHHHHHHHHHhcceEEcCC---------
Q psy16707 40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFC--YTGLNATQVEKLIKEHSVYLTKD--------- 104 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q----~GmFs--~~gL~~~qv~~L~~~~~IY~~~~--------- 104 (420)
.+.++.++++++.+|+.|.+.|++.. .+.....+ -++++ +.+.+.+++...-++++|++...
T Consensus 251 ~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~ 327 (382)
T 4hvk_A 251 AMEWREEAERLRRLRDRIIDNVLKIE---ESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQ 327 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTST---TEEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------C
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCc
Confidence 35678889999999999999997542 12222222 12333 45778877766556779988642
Q ss_pred ----------------C--ceecccC-CcCCHHHHHHHHHhh
Q psy16707 105 ----------------G--RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 ----------------G--Rinvagl-~~~ni~~va~ai~~v 127 (420)
+ ||++... +..++++++++|.++
T Consensus 328 ~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~ 369 (382)
T 4hvk_A 328 PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp CCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred chHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 2 6776643 467899999888876
No 330
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=91.44 E-value=1.6 Score=42.22 Aligned_cols=83 Identities=17% Similarity=0.292 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecC-----CCHHHHHHHHHhcceEEcCC----------
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTG-----LNATQVEKLIKEHSVYLTKD---------- 104 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~g-----L~~~qv~~L~~~~~IY~~~~---------- 104 (420)
+.++.++++++.+|+.|.+.|++.+ +..+. ...|.|...- .+.+++...-.+++|++...
T Consensus 277 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~ 352 (407)
T 2dkj_A 277 PEFKEYSRLVVENAKRLAEELARRG----YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPR 352 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCC----ceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCcccccccc
Confidence 4567788999999999999998863 44333 2456555443 35666654446789987642
Q ss_pred ----Cceeccc-----CCcCCHHHHHHHHHhh
Q psy16707 105 ----GRISMAG-----VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 ----GRinvag-----l~~~ni~~va~ai~~v 127 (420)
=||+++. .+..++++++++|.++
T Consensus 353 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 384 (407)
T 2dkj_A 353 VTSGIRIGTPAITTRGFTPEEMPLVAELIDRA 384 (407)
T ss_dssp TCSEEEEECHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred CCCceeeecccccccCCCHHHHHHHHHHHHHH
Confidence 2778764 7899999999999887
No 331
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=91.00 E-value=0.98 Score=42.92 Aligned_cols=96 Identities=17% Similarity=0.282 Sum_probs=66.5
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHH-HHH
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQ-VEK 92 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~q-v~~ 92 (420)
+++..+...+...|.+. +| ++.++++++..|+.|.+.|++.+ |. +....|+|.+.-+. .++ .+.
T Consensus 232 ~~~~~~~~~~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~ 299 (335)
T 1uu1_A 232 NVSYVSQMFAKVALDHR----EI---FEERTKFIVEERERMKSALREMG----YR-ITDSRGNFVFVFMEKEEKERLLEH 299 (335)
T ss_dssp CSCHHHHHHHHHHHHTH----HH---HHHHHHHHHHHHHHHHHHHHHHT----CC-BCCCCSSEEEEECCTHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCH----HH---HHHHHHHHHHHHHHHHHHHHHCC----cE-EcCCCCeEEEEECCCCCHHHHHHH
Confidence 66777888888888762 34 55667888899999999998763 33 33556888777664 233 455
Q ss_pred HHHhcceEEcC-CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 93 LIKEHSVYLTK-DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 93 L~~~~~IY~~~-~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
|. +++|++.+ .| ||+++. +.+++.++++|.++
T Consensus 300 l~-~~gi~v~~~~~~iRis~~~--~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 300 LR-TKNVAVRSFREGVRITIGK--REENDMILRELEVF 334 (335)
T ss_dssp HH-HHTEEEEEETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred HH-HCCEEEEECCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence 65 57999863 33 788753 46788888887653
No 332
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=90.84 E-value=0.47 Score=48.48 Aligned_cols=83 Identities=19% Similarity=0.305 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc----cccceee--cCCCHHHHHHHHHhcceEEc----CC------
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIGMFCY--TGLNATQVEKLIKEHSVYLT----KD------ 104 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~----Q~GmFs~--~gL~~~qv~~L~~~~~IY~~----~~------ 104 (420)
.+++++.+++..+|+.|.+.|++.| +..+.. +..+..+ .|++.+++..+-++++|.+. +.
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~ 396 (483)
T 1rv3_A 321 PEFKEYQRQVVANCRALSAALVELG----YKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALR 396 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcC----CEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCC
Confidence 3567788999999999999998764 332222 1123333 27788888877788999987 31
Q ss_pred ---CceecccCC-----cCCHHHHHHHHHhh
Q psy16707 105 ---GRISMAGVT-----SKNVGYLAKAIHAN 127 (420)
Q Consensus 105 ---GRinvagl~-----~~ni~~va~ai~~v 127 (420)
=||+++..| ..++++++++|.++
T Consensus 397 ~~~iRis~~~~~t~g~~~edi~~~~~~l~~~ 427 (483)
T 1rv3_A 397 PSGLRLGTPALTSRGLLEKDFQKVAHFIHRG 427 (483)
T ss_dssp CCEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CceEEeecCCcccCCCCHHHHHHHHHHHHHH
Confidence 167776543 68999999999887
No 333
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=90.34 E-value=1.1 Score=42.51 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=65.3
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc--c-ccccceeecCCCH-
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI--T-DQIGMFCYTGLNA- 87 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i--~-~Q~GmFs~~gL~~- 87 (420)
+..+++||..+...+...|. .+.+. ..++.++++++..|+.|.+.|++.+ +-+... . .+.|+|...-+..
T Consensus 233 ~~~~~~~~~~~~~~~~~al~--~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 306 (360)
T 1w23_A 233 DSLYNTPPTFSIYMLRNVLD--WIKDL--GGAEAIAKQNEEKAKIIYDTIDESN--GFYVGHAEKGSRSLMNVTFNLRNE 306 (360)
T ss_dssp TTCSSCCCHHHHHHHHHHHH--HHHHT--THHHHHHHHHHHHHHHHHHHHHTTT--TSSEESSCGGGBCSSEEEEECSSH
T ss_pred cCCCCCCCHHHHHHHHHHHH--HHHHh--cCHHHHHHHHHHHHHHHHHHHHHcc--CcccccCCchhccCcEEEEEcCCC
Confidence 35567777776555554442 11111 0367889999999999999998764 211322 1 1446444444432
Q ss_pred ---HH-HHHHHHhcceEEcCC----C--ceecccC-CcCCHHHHHHHHHhh
Q psy16707 88 ---TQ-VEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ---~q-v~~L~~~~~IY~~~~----G--Rinvagl-~~~ni~~va~ai~~v 127 (420)
++ ++.| .+++|.+.+. | ||++... +.+.+++++++|.++
T Consensus 307 ~~~~~~~~~l-~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 356 (360)
T 1w23_A 307 ELNQQFLAKA-KEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQF 356 (360)
T ss_dssp HHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHH-HHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 22 2334 3478887543 2 7777653 667899999998765
No 334
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=90.13 E-value=0.74 Score=44.74 Aligned_cols=80 Identities=10% Similarity=0.049 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-HHHHHHHHhcceEEcCC-----------C
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-----------G 105 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~qv~~L~~~~~IY~~~~-----------G 105 (420)
+++.++++++..|+.|.+.|++.+ |..+. ..|+|...-+. . +-++.|.++ +|++.+. =
T Consensus 292 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~i 365 (398)
T 3a2b_A 292 NEPEHIEKLWKNTDYAKAQLLDHG----FDLGA-TESPILPIFIRSNEKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLI 365 (398)
T ss_dssp HCTHHHHHHHHHHHHHHHHHHHTT----CCBCS-CCSSEEEEECCCHHHHHHHHHHHHHT-TEECEEECTTTSCGGGCEE
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcC----CCcCC-CCCCEEEEEcCCHHHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceE
Confidence 477889999999999999998863 44333 34777666554 2 334567666 9988642 3
Q ss_pred ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 106 RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 Rinvag-l~~~ni~~va~ai~~v 127 (420)
||+++. ++..+++.++++|.++
T Consensus 366 Ris~~~~~~~e~i~~~~~~l~~~ 388 (398)
T 3a2b_A 366 RFSLMATHTYDQIDEAIEKMVKV 388 (398)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHH
Confidence 788887 6889999999998876
No 335
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=90.12 E-value=0.36 Score=48.59 Aligned_cols=38 Identities=8% Similarity=0.113 Sum_probs=29.8
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.+.||+.|+.+++..+ +.| ||.|++++|.|+.....+
T Consensus 101 i~~ssGt~Ai~~al~~l--~~~-Gd~Vi~~~~~y~~~~~~~ 138 (415)
T 2fq6_A 101 VLFPCGAAAVANSILAF--IEQ-GDHVLMTNTAYEPSQDFC 138 (415)
T ss_dssp EEESSHHHHHHHHHHTT--CCT-TCEEEEETTSCHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHH--hCC-CCEEEEeCCCchHHHHHH
Confidence 45789999998877532 457 999999999998776554
No 336
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=89.82 E-value=2.4 Score=40.49 Aligned_cols=80 Identities=15% Similarity=0.069 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhcCCCCCCcccc-c----cccceeecCC--CHHHHHHHHHhcceEEcCC-------C--
Q psy16707 43 VKGMADRIISMRQSLKDNL-QKEGSNKPWNHIT-D----QIGMFCYTGL--NATQVEKLIKEHSVYLTKD-------G-- 105 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L-~~~~~~~~w~~i~-~----Q~GmFs~~gL--~~~qv~~L~~~~~IY~~~~-------G-- 105 (420)
++.++++++.+|+.|.+.| ++.+ +..+. . ..|.|....+ ..+-++.|. +++|++... +
T Consensus 279 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~~i 353 (385)
T 2bkw_A 279 LHKRWDLHREMSDWFKDSLVNGLQ----LTSVSRYPSNMSAHGLTAVYVADPPDVIAFLK-SHGVVIAGGIHKDIGPKYI 353 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTC----CEESSCSSSTTBCSSCEEEECSCHHHHHHHHH-HTTEECBCCCCTTTGGGEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----ceecccCcccccCCceEEEecCCHHHHHHHHH-HCCeEEeCCCCcccCCCEE
Confidence 7788999999999999999 7652 33332 1 2344433333 234455664 679988642 2
Q ss_pred cee-cc----cCCcCCHHHHHHHHHhh
Q psy16707 106 RIS-MA----GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 Rin-va----gl~~~ni~~va~ai~~v 127 (420)
||+ ++ ..+.++++.++++|.++
T Consensus 354 Ris~~~~~~~~~~~e~i~~~~~~l~~~ 380 (385)
T 2bkw_A 354 RIGHMGVTACNKNLPYMKNCFDLIKLA 380 (385)
T ss_dssp EECCCGGGTSSTTCTHHHHHHHHHHHH
T ss_pred EEEccccccccCCHHHHHHHHHHHHHH
Confidence 666 54 46899999999999887
No 337
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=89.35 E-value=0.39 Score=48.87 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=29.7
Q ss_pred cccchHHHHHHHHHHHhcCCCCCEEEEcC-CCCCCcHHHH
Q psy16707 254 GISGTGSLRVGAAFLKNFFPGEKVIYVPT-PTWGNHIPIC 292 (420)
Q Consensus 254 t~gGtgal~~~~~~l~~~~p~gd~Vlvpd-P~w~ny~~i~ 292 (420)
+.|||.|+..++. ..+.| ||+|++++ |.|+.+..++
T Consensus 98 ~~sGt~A~~~al~--all~p-GD~Vl~~~~~~y~~~~~~~ 134 (427)
T 3hvy_A 98 FVNGTHAIGAALF--GNLRP-NDTMMSICGMPYDTLHDII 134 (427)
T ss_dssp CCSHHHHHHHHHH--HTCCT-TCEEEECSSSCCGGGHHHH
T ss_pred CCcHHHHHHHHHH--HhcCC-CCEEEEeCCCCchhHHHHh
Confidence 8999999987765 33668 99999999 9999888555
No 338
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=89.16 E-value=0.99 Score=45.19 Aligned_cols=106 Identities=13% Similarity=0.118 Sum_probs=65.2
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc-cceee--c--CC
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLT-E--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI-GMFCY--T--GL 85 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~-e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~-GmFs~--~--gL 85 (420)
.|-+||..|..-...-|. |.. + ++.+.+|.+.+++.|++.|++.+.-.....-..+. +..+| - ++
T Consensus 261 ~~gTp~v~~i~~l~~Al~-------~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~ 333 (386)
T 3qm2_A 261 MFNTPPTFAWYLSGLVFK-------WLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTL 333 (386)
T ss_dssp -----CCSHHHHHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGG
T ss_pred CCCCCcHHHHHHHHHHHH-------HHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccc
Confidence 355888887665554442 433 3 79999999999999999998864211111111222 34444 3 46
Q ss_pred CHHHHHHHHHhcceEEcC------CCceecccC-CcCCHHHHHHHHHhh
Q psy16707 86 NATQVEKLIKEHSVYLTK------DGRISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 86 ~~~qv~~L~~~~~IY~~~------~GRinvagl-~~~ni~~va~ai~~v 127 (420)
.++-+..| ++++|++.. .=||++.+- +..+||+++++|.++
T Consensus 334 ~~~~~~~L-~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~ 381 (386)
T 3qm2_A 334 DKVFLEES-FAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDF 381 (386)
T ss_dssp HHHHHHHH-HHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHH-HHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 65556666 467888643 236777665 468999999999875
No 339
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=88.86 E-value=0.97 Score=45.70 Aligned_cols=84 Identities=7% Similarity=0.153 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeec--CCCHHHHHHHHHhcceEEcCC-----CceecccCC
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT--GLNATQVEKLIKEHSVYLTKD-----GRISMAGVT 113 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~-----GRinvagl~ 113 (420)
.++++.+++..+++.|.+.|++. .+ .+..+. .+.++|++. |++..++...-.+++|++... -|+++...+
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~-~~-g~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~~~t 419 (497)
T 3mc6_A 342 GYIESCQEIVGAAMKFKKYIQEN-IP-DLDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFTRLS 419 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-CT-TCEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CC-CEEEecCCCeeEEEEeCCCCCHHHHHHHHHhCCEEEecCCCCCeEEEEEeCCC
Confidence 45677888889999999999874 11 133332 456677764 556666554445668876532 289999899
Q ss_pred cCCHHHHHHHHHhh
Q psy16707 114 SKNVGYLAKAIHAN 127 (420)
Q Consensus 114 ~~ni~~va~ai~~v 127 (420)
..+++.++++|.++
T Consensus 420 ~e~i~~~~~~L~~~ 433 (497)
T 3mc6_A 420 AHVVDEICDILRTT 433 (497)
T ss_dssp TCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998886
No 340
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=88.82 E-value=1.2 Score=44.11 Aligned_cols=108 Identities=14% Similarity=0.210 Sum_probs=69.5
Q ss_pred hccCCCccchHHHHHHHHhCChhHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHhcCCC-CCCcccccc-ccceee--cC
Q psy16707 12 RAFYSSPPIHGARIVQEILGDPKLKAQWLT-E--VKGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQ-IGMFCY--TG 84 (420)
Q Consensus 12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~-e--l~~m~~Ri~~~R~~l~~~L~~~~~~-~~w~~i~~Q-~GmFs~--~g 84 (420)
...|-+||.+|..-...-|. |.. + ++.+.+|.+.+++.|++.|++.+.- .....-..+ .+..+| -|
T Consensus 232 ~~~~~Tp~v~~i~~l~~al~-------~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~ 304 (361)
T 3m5u_A 232 QSLFNTPPTFAIYMFNLEMD-------WLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAK 304 (361)
T ss_dssp TTCSSCCCHHHHHHHHHHHH-------HHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESS
T ss_pred CCCCCCccHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCC
Confidence 34567888887665554443 443 3 7899999999999999999876521 000001112 245555 33
Q ss_pred ---CCHHHHHHHHHhcceEEcCC------CceecccC-CcCCHHHHHHHHHhh
Q psy16707 85 ---LNATQVEKLIKEHSVYLTKD------GRISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 ---L~~~qv~~L~~~~~IY~~~~------GRinvagl-~~~ni~~va~ai~~v 127 (420)
+.++-+..| ++++|++... =||++.+- +..+||+++++|.++
T Consensus 305 ~~~~~~~~~~~L-~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~ 356 (361)
T 3m5u_A 305 NKDLEPLFVKEA-EEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEF 356 (361)
T ss_dssp CTTHHHHHHHHH-HHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHH-HHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 554445556 5669987533 27787776 558899999999875
No 341
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=88.77 E-value=2.1 Score=41.74 Aligned_cols=83 Identities=12% Similarity=0.220 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cc--eeecCCCHHHHHHHHHhcceEEcCC---------
Q psy16707 40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GM--FCYTGLNATQVEKLIKEHSVYLTKD--------- 104 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----Gm--Fs~~gL~~~qv~~L~~~~~IY~~~~--------- 104 (420)
.++++.++++++.+|+.|.+.|++.. .+..+..+. ++ |.+.+.+.+++...-.+ |++...
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~ 353 (423)
T 3lvm_A 279 KEEMATEMERLRGLRNRLWNGIKDIE---EVYLNGDLEHGAPNILNVSFNYVEGESLIMALKD--LAVSSGSACTSASLE 353 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTST---TEEEESCSTTBCTTEEEEEETTSCHHHHHHHTTT--EECBCCCC-----CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CEEEeCCccccCCCeEEEEeCCCCHHHHHHHHhh--heeccCccccCCCcc
Confidence 34488999999999999999997652 133332221 33 34467777776554444 555432
Q ss_pred ----------------C--ceecccC-CcCCHHHHHHHHHhh
Q psy16707 105 ----------------G--RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 ----------------G--Rinvagl-~~~ni~~va~ai~~v 127 (420)
+ ||+++.. +..+|++++++|.++
T Consensus 354 ~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~ 395 (423)
T 3lvm_A 354 PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKS 395 (423)
T ss_dssp CCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHH
Confidence 1 7777744 458899999998887
No 342
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=88.75 E-value=0.76 Score=44.36 Aligned_cols=81 Identities=15% Similarity=0.225 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH-HHHHHHHhcceEEcCC-----------C
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QVEKLIKEHSVYLTKD-----------G 105 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~-qv~~L~~~~~IY~~~~-----------G 105 (420)
.++.++++++..|+.|.+.|++.+ |.... ..|.|...-+ +.+ -++.|.+ ++|++.+. =
T Consensus 287 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~ 360 (384)
T 1bs0_A 287 EGDARREKLAALITRFRAGVQDLP----FTLAD-SCSAIQPLIVGDNSRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARL 360 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSS----CEECS-CCSSBCCEEEESHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcC----CcccC-CCCCEEEEEeCCHHHHHHHHHHHHH-CCcEEEeecCCCCCCCCceE
Confidence 456788899999999999998763 43332 3344332222 233 3455655 49988632 2
Q ss_pred ceeccc-CCcCCHHHHHHHHHhhC
Q psy16707 106 RISMAG-VTSKNVGYLAKAIHANG 128 (420)
Q Consensus 106 Rinvag-l~~~ni~~va~ai~~v~ 128 (420)
||+++. ++..+++.++++|.++|
T Consensus 361 Ri~~~~~~~~~~i~~~~~~l~~~~ 384 (384)
T 1bs0_A 361 RLTLTAAHEMQDIDRLLEVLHGNG 384 (384)
T ss_dssp CCBCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEcCCCCHHHHHHHHHHHHhhC
Confidence 788874 47899999999998864
No 343
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=88.67 E-value=0.35 Score=49.39 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=55.6
Q ss_pred CCchHHHHHHHHHHHccCCCCCCCCCCCCH---HHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceee
Q psy16707 177 PYVLPSVKQADEIVLNKNLDKEYAPIIGAP---DFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQ 253 (420)
Q Consensus 177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~---~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vq 253 (420)
++.++...++..........+.|.- .+.+ ++++.+++++ |.. + . +.
T Consensus 86 t~~~~~~~~~~~~~~~~~~~~~y~r-~~~~~~~~l~~~lA~l~-g~~------~-~----------------------v~ 134 (445)
T 1qgn_A 86 AYFFNKTSELIDFKEKRRASFEYGR-YGNPTTVVLEEKISALE-GAE------S-T----------------------LL 134 (445)
T ss_dssp BBCBSSHHHHHHHHTTSSCCCCBGG-GCCHHHHHHHHHHHHHH-TCS------E-E----------------------EE
T ss_pred ceecCCHHHHHhhhccccCCccccC-CCChHHHHHHHHHHHHh-CCC------c-E----------------------EE
Confidence 3445555555443322233566753 3444 8999999876 321 1 1 45
Q ss_pred cccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707 254 GISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE 298 (420)
Q Consensus 254 t~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~ 298 (420)
+.+|+.|+.+++..+ +.| ||.|++++|+|+++...+ +..|++
T Consensus 135 ~~sG~~Ai~~al~~l--~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 180 (445)
T 1qgn_A 135 MASGMCASTVMLLAL--VPA-GGHIVTTTDCYRKTRIFIETILPKMGIT 180 (445)
T ss_dssp ESCHHHHHHHHHHHH--SCS-SCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred eCCHHHHHHHHHHHH--hCC-CCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence 778889998887644 457 999999999999877643 445654
No 344
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=88.64 E-value=0.94 Score=43.43 Aligned_cols=77 Identities=10% Similarity=0.120 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHHHHhcceEEcC--CCc--eecc-cCCcCC
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTK--DGR--ISMA-GVTSKN 116 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L~~~~~IY~~~--~GR--inva-gl~~~n 116 (420)
.+.++++.+|+.|.+.|++.+. ......|+|...-+. .+-++.|. +++|++.+ .+. |+++ ..+..+
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~iRi~~~~~~~~~~ 363 (375)
T 2eh6_A 290 KLLPHVREVGNYFKEKLKELGK-----GKVKGRGLMLGLELERECKDYVLKAL-EKGLLINCTAGKVLRFLPPLIIQKEH 363 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS-----SEEEEETTEEEEECSSCCHHHHHHHH-HTTEECEEETTTEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEEEEEEEcCcHHHHHHHHH-HCCCEEecCCCCEEEEECCCCCCHHH
Confidence 6778888899999999987642 123456777665553 45566776 57998864 344 4444 688899
Q ss_pred HHHHHHHHHhh
Q psy16707 117 VGYLAKAIHAN 127 (420)
Q Consensus 117 i~~va~ai~~v 127 (420)
+++++++|.++
T Consensus 364 i~~~~~~l~~~ 374 (375)
T 2eh6_A 364 IDRAISVLREI 374 (375)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 345
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=88.18 E-value=0.41 Score=47.01 Aligned_cols=80 Identities=16% Similarity=0.198 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCCCccccccccceeecCCC------------H-HHHHHHHHhcceEEcCCC----
Q psy16707 45 GMADRIISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGLN------------A-TQVEKLIKEHSVYLTKDG---- 105 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~--~~~~w~~i~~Q~GmFs~~gL~------------~-~qv~~L~~~~~IY~~~~G---- 105 (420)
.+.+++..+|+.|.+.|++.+ .+. +..+. ..|+|...-+. . +-++.|. +++|++.+.+
T Consensus 319 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~ 395 (426)
T 1sff_A 319 NLLQKANDLGQKLKDGLLAIAEKHPE-IGDVR-GLGAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPYYN 395 (426)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCTT-EEEEE-EETTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEE-EEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCCCC
Confidence 345667777777777776543 121 22222 34777665552 2 2345665 4699987644
Q ss_pred --ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 106 --RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 --Rinva-gl~~~ni~~va~ai~~v 127 (420)
||+++ ..+..+++.++++|.++
T Consensus 396 ~iRi~~~~~~~~~~i~~~~~~l~~~ 420 (426)
T 1sff_A 396 VLRILVPLTIEDAQIRQGLEIISQC 420 (426)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCccCCHHHHHHHHHHHHHH
Confidence 78877 78899999999998875
No 346
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=88.12 E-value=1.2 Score=43.15 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-HHHHHHHHhcceEEcCC-----------Cc
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-----------GR 106 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~qv~~L~~~~~IY~~~~-----------GR 106 (420)
.+.++++++.+|+.|.+.|++.+ |..+ ...|.|...-+. . +-++.|.+ ++|++.+. =|
T Consensus 298 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iR 371 (401)
T 1fc4_A 298 GSELRDRLWANARQFREQMSAAG----FTLA-GADHAIIPVMLGDAVVAQKFARELQK-EGIYVTGFFYPVVPKGQARIR 371 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT----CCBC-CSSSSEEEEEEECHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcC----Cccc-CCCCCEEEEEcCChHHHHHHHHHHHH-CCcEEeeecCCCCCCCCceEE
Confidence 56788899999999999998863 3333 345555544332 2 33456655 49988642 36
Q ss_pred eecc-cCCcCCHHHHHHHHHhh
Q psy16707 107 ISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 107 inva-gl~~~ni~~va~ai~~v 127 (420)
|+++ ..+..+++.++++|.++
T Consensus 372 i~~~~~~~~~~i~~~~~~l~~~ 393 (401)
T 1fc4_A 372 TQMSAAHTPEQITRAVEAFTRI 393 (401)
T ss_dssp EECCTTCCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHH
Confidence 7876 46889999999998876
No 347
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=87.82 E-value=0.91 Score=43.88 Aligned_cols=83 Identities=18% Similarity=0.139 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cceee--cCCCHHHHHHHHHhcceEEcCC---------
Q psy16707 40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCY--TGLNATQVEKLIKEHSVYLTKD--------- 104 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----GmFs~--~gL~~~qv~~L~~~~~IY~~~~--------- 104 (420)
.+.++.++++++.+|+.|.+.|+ . + .+..+..+. +++++ .+.+.+++...-. ++|++...
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~ 353 (400)
T 3vax_A 279 EAEHAQWQVAAQDLRSRLLAGLA-S--T-SFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLK-DLVAVATGSASTSASFT 353 (400)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHT-T--T-TCEECSCTTSBCTTEEEEECTTCCHHHHHHHHH-HHHHHTTTTEEEEEEEC
T ss_pred HhhHHHHHHHHHHHHHHHHHhhC-C--C-CEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHh-cCcEEEecccccCCCCC
Confidence 34578899999999999999997 2 2 244444333 35544 3566666544334 78876542
Q ss_pred ----------------C--ceec-c-cCCcCCHHHHHHHHHhh
Q psy16707 105 ----------------G--RISM-A-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 ----------------G--Rinv-a-gl~~~ni~~va~ai~~v 127 (420)
+ ||++ . ..+...+++++++|.++
T Consensus 354 ~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~ 396 (400)
T 3vax_A 354 PSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKL 396 (400)
T ss_dssp CHHHHHTTTCCHHHHTSEEEEEEEEC-----------------
T ss_pred ccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHH
Confidence 2 6676 3 35678899999888775
No 348
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=87.58 E-value=0.79 Score=45.48 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cc-cccceeec-C--C-CHHHHHHHHHhcceEEcCC-----------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TD-QIGMFCYT-G--L-NATQVEKLIKEHSVYLTKD----------- 104 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-~~-Q~GmFs~~-g--L-~~~qv~~L~~~~~IY~~~~----------- 104 (420)
+++.++++++.+|+.|.+.|++.+ |..+ .. +.+|+++. + . ..+-++.|.++ +|++.+.
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~ 387 (427)
T 2w8t_A 313 TAHEKRERLWSNARALHGGLKAMG----FRLGTETCDSAIVAVMLEDQEQAAMMWQALLDG-GLYVNMARPPATPAGTFL 387 (427)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHT----CEESCSSCCSSEEEEEESSHHHHHHHHHHHHHT-TEECEEECTTTSCTTCEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcC----CcccCCCCCCCEEEEEECCHHHHHHHHHHHHHC-CeEEeeeCCCCCCCCCeE
Confidence 367788999999999999998873 4433 22 33444432 1 1 22344567655 9998642
Q ss_pred Cceeccc-CCcCCHHHHHHHHHhh
Q psy16707 105 GRISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 GRinvag-l~~~ni~~va~ai~~v 127 (420)
-||+++. .+..+|+.++++|.++
T Consensus 388 lRi~~~~~~t~e~i~~~~~~l~~~ 411 (427)
T 2w8t_A 388 LRCSICAEHTPAQIQTVLGMFQAA 411 (427)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3677776 5788999999998876
No 349
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=87.29 E-value=1.1 Score=45.14 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=30.1
Q ss_pred cccchHHHHHHHHHHHhcCCCCCEEEEcC-CCCCCcHHHH
Q psy16707 254 GISGTGSLRVGAAFLKNFFPGEKVIYVPT-PTWGNHIPIC 292 (420)
Q Consensus 254 t~gGtgal~~~~~~l~~~~p~gd~Vlvpd-P~w~ny~~i~ 292 (420)
+.|||.|+.+++..+ +.| ||+|++++ |.|+.+..++
T Consensus 83 ~~sGt~Ai~~al~al--l~~-GD~Vl~~~~~~y~~~~~~~ 119 (409)
T 3jzl_A 83 IISGTHAISTVLFGI--LRP-DDELLYITGQPYDTLEEIV 119 (409)
T ss_dssp SCSHHHHHHHHHHHH--CCT-TCEEEECSSSCCTTHHHHH
T ss_pred CccHHHHHHHHHHHh--cCC-CCEEEEeCCCCcHhHHHHH
Confidence 899999998877533 567 99999999 9999998655
No 350
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=87.28 E-value=1.1 Score=43.31 Aligned_cols=83 Identities=22% Similarity=0.336 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeec-----CCCHHHHHHHHHhcceEEcCC----------
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLTKD---------- 104 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-Q~GmFs~~-----gL~~~qv~~L~~~~~IY~~~~---------- 104 (420)
+.++.+++++..+|+.|.+.|++.+ +..+.. ..|.|... |.+.+++...-.+++|++.+.
T Consensus 276 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~ 351 (405)
T 2vi8_A 276 DDFKAYAKRVVDNAKRLASALQNEG----FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPF 351 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCC
Confidence 3566788899999999999998863 443332 23554443 345666655447789987641
Q ss_pred --C--ceeccc-----CCcCCHHHHHHHHHhh
Q psy16707 105 --G--RISMAG-----VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 --G--Rinvag-----l~~~ni~~va~ai~~v 127 (420)
+ ||+++. ++..++++++++|.++
T Consensus 352 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 383 (405)
T 2vi8_A 352 VTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLV 383 (405)
T ss_dssp TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCceEEeeeeeeecCCCHHHHHHHHHHHHHH
Confidence 2 888884 7899999999999887
No 351
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=86.70 E-value=3.3 Score=42.77 Aligned_cols=94 Identities=13% Similarity=0.265 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccc--eee--cCCCHHHHHHHHHhcceEEcCC---
Q psy16707 34 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGM--FCY--TGLNATQVEKLIKEHSVYLTKD--- 104 (420)
Q Consensus 34 ~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~--Q~Gm--Fs~--~gL~~~qv~~L~~~~~IY~~~~--- 104 (420)
.|+..+..+.++..+++...++.|.+.|.+.| |.-+.. +.-+ +.+ .|++.++++.+-++.+|++..+
T Consensus 324 Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G----~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p 399 (490)
T 2a7v_A 324 ALKQACTPMFREYSLQVLKNARAMADALLERG----YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCP 399 (490)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCT
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcC----cEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccC
Confidence 34455555667778888999999999998764 332221 1112 222 3678888877778889998632
Q ss_pred --------Cceec-------ccCCcCCHHHHHHHHHhhCCCc
Q psy16707 105 --------GRISM-------AGVTSKNVGYLAKAIHANGSLP 131 (420)
Q Consensus 105 --------GRinv-------agl~~~ni~~va~ai~~v~~~p 131 (420)
++|-+ -|+++.++++++++|.++-++.
T Consensus 400 ~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 400 GDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp TCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 33333 2678899999999999886554
No 352
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=86.69 E-value=0.26 Score=48.88 Aligned_cols=60 Identities=12% Similarity=0.034 Sum_probs=42.7
Q ss_pred CCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707 196 DKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP 273 (420)
Q Consensus 196 ~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p 273 (420)
.|.|. +..+..++++++++++ |.+ .+ +.+.+||.|+.+++. + +.|
T Consensus 46 ~~~~~~~~~~~~~~lr~~la~~~-g~~-------~~----------------------i~~~sGt~a~~~al~-~--~~~ 92 (393)
T 1n8p_A 46 TYEYSRSQNPNRENLERAVAALE-NAQ-------YG----------------------LAFSSGSATTATILQ-S--LPQ 92 (393)
T ss_dssp SCCBTTTCCHHHHHHHHHHHHHT-TCS-------EE----------------------EEESCHHHHHHHHHH-T--SCS
T ss_pred CcceecCCChhHHHHHHHHHHHh-CCC-------cE----------------------EEECChHHHHHHHHH-H--cCC
Confidence 34554 3345679999999975 322 11 557778999999887 4 447
Q ss_pred CCCEEEEcCCCCCCcH
Q psy16707 274 GEKVIYVPTPTWGNHI 289 (420)
Q Consensus 274 ~gd~VlvpdP~w~ny~ 289 (420)
||.|++++|+|++..
T Consensus 93 -gd~Vi~~~~~y~~~~ 107 (393)
T 1n8p_A 93 -GSHAVSIGDVYGGTH 107 (393)
T ss_dssp -SCEEEEESSCCHHHH
T ss_pred -CCEEEEeCCCchHHH
Confidence 899999999998433
No 353
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=86.49 E-value=0.7 Score=46.95 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=29.9
Q ss_pred cccchHHHHHHHHHHHhcCCCCCEEEEcC-CCCCCcHHHH
Q psy16707 254 GISGTGSLRVGAAFLKNFFPGEKVIYVPT-PTWGNHIPIC 292 (420)
Q Consensus 254 t~gGtgal~~~~~~l~~~~p~gd~Vlvpd-P~w~ny~~i~ 292 (420)
+.|||.|+..++..+ +.| ||+|++++ |.|+.+..++
T Consensus 97 ~~sGt~Ai~~al~al--l~p-GD~Vl~~~~~~y~~~~~~~ 133 (427)
T 3i16_A 97 FVNGTHALGAALFGN--LRP-GNTMLSVCGEPYDTLHDVI 133 (427)
T ss_dssp CCSHHHHHHHHHHHH--CCT-TCEEEESSSSCCGGGHHHH
T ss_pred CccHHHHHHHHHHHH--hCC-CCEEEEeCCCccHHHHHHH
Confidence 899999998776533 568 99999999 9999988665
No 354
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=86.40 E-value=1.3 Score=42.99 Aligned_cols=82 Identities=17% Similarity=0.185 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHHHhcceEEcCC--C--ceecc-cCCcC
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTKD--G--RISMA-GVTSK 115 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~qv~~L~~~~~IY~~~~--G--Rinva-gl~~~ 115 (420)
..+.++++.+|+.|.+.|++.+.+ +-......|+|...-+ ..+-++.|.++++|.+.+. + ||+++ ..+..
T Consensus 304 ~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~ 381 (395)
T 1vef_A 304 TRLWERAAELGPWFMEKLRAIPSP--KIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKE 381 (395)
T ss_dssp HTTHHHHHHHHHHHHHHHHTSCCT--TEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcC--ceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHH
Confidence 357888999999999999876532 1111234565544433 4455677875789988754 3 45544 56778
Q ss_pred CHHHHHHHHHhh
Q psy16707 116 NVGYLAKAIHAN 127 (420)
Q Consensus 116 ni~~va~ai~~v 127 (420)
+++.++++|.++
T Consensus 382 ~i~~~~~~l~~~ 393 (395)
T 1vef_A 382 DLERVVEAVRAV 393 (395)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998775
No 355
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=85.85 E-value=1.2 Score=43.23 Aligned_cols=83 Identities=20% Similarity=0.298 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeec-----CCCHHHHHHHHHhcceEEc----CC------
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLT----KD------ 104 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-Q~GmFs~~-----gL~~~qv~~L~~~~~IY~~----~~------ 104 (420)
++++.+++++..+++.|.+.|++.+ |..+.. ..|.|... +.+.+.+..+-++++|++. +.
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~ 361 (425)
T 3ecd_A 286 DDFKTYIDRVLANAQALGDVLKAGG----VDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPT 361 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCC----CeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCC
Confidence 5567788899999999999998743 443332 23333322 5577777776688899987 21
Q ss_pred --C--ceecc-----cCCcCCHHHHHHHHHhh
Q psy16707 105 --G--RISMA-----GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 --G--Rinva-----gl~~~ni~~va~ai~~v 127 (420)
+ ||+.. +++...++.++++|.++
T Consensus 362 ~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~ 393 (425)
T 3ecd_A 362 ITSGIRLGTPAGTTRGFGAAEFREVGRLILEV 393 (425)
T ss_dssp TCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence 2 33322 33468888998888776
No 356
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=85.50 E-value=3.6 Score=40.02 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=67.3
Q ss_pred ccCCCccchHHHHHHHHhCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--c--ccc-ceee---
Q psy16707 13 AFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--D--QIG-MFCY--- 82 (420)
Q Consensus 13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~--Q~G-mFs~--- 82 (420)
..+++|+..+...+...|. ...++ ++.++++++..|+.|.+.|++.. .+..+. . +.| ++++
T Consensus 270 ~~~~t~~~~~~~a~~~al~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~ 340 (398)
T 2fyf_A 270 QTYNTPAIATLALLAEQID------WLVGNGGLDWAVKRTADSSQRLYSWAQERP---YTTPFVTDPGLRSQVVGTIDFV 340 (398)
T ss_dssp CCSSCCCHHHHHHHHHHHH------HHHHHTSHHHHHHHHHHHHHHHHHHHHHST---TEEESCCSGGGBCSSEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHH------HHHHccCHHHHHHHHHHHHHHHHHHHHHcC---CceeccCChhhcCCcEEEEECC
Confidence 3456677665554444442 12333 88899999999999999998762 243332 2 456 3333
Q ss_pred cCCCHHH-HHHHHHhcceEEcC------CC--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 83 TGLNATQ-VEKLIKEHSVYLTK------DG--RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 83 ~gL~~~q-v~~L~~~~~IY~~~------~G--Rinvag-l~~~ni~~va~ai~~v 127 (420)
-|++.++ ++.|.++ +|++.. .+ ||++.. .+..+++.++++|.++
T Consensus 341 ~~~~~~~l~~~L~~~-gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 394 (398)
T 2fyf_A 341 DDVDAGTVAKILRAN-GIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWV 394 (398)
T ss_dssp TTSCHHHHHHHHHHT-TCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHC-CcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 2456555 4567655 888853 12 677764 5778999999998875
No 357
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=85.46 E-value=0.17 Score=52.20 Aligned_cols=81 Identities=12% Similarity=0.200 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC------------------HHHHHHHHHhCCeEEeCCCc-
Q psy16707 337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------------------ATQVEKLIKEHSVYLTKDGR- 397 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~------------------~~~v~~Ll~e~~Vy~~p~gR- 397 (420)
+.+++.++++.+.+.|+++.....+....+..|+|.++-+. .++++.|+ +.||++.|++-
T Consensus 357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~~ 435 (465)
T 2yky_A 357 AASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGMY 435 (465)
Confidence 44566666666666665542111122234566777765322 13445665 78999998652
Q ss_pred -EEEcccCCCCHHHHHHHHHHHh
Q psy16707 398 -ISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 398 -is~agl~~~ni~~la~AI~~vv 419 (420)
++++ .++++|+.+.+++.+++
T Consensus 436 ~~s~~-~t~edid~~l~~l~~~l 457 (465)
T 2yky_A 436 ALSLE-IADAGRDAFAEALADFI 457 (465)
Confidence 6765 89999999999988875
No 358
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=85.08 E-value=2.6 Score=42.91 Aligned_cols=84 Identities=13% Similarity=0.086 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CCCHHHHHHHHHhcceEEcCC-----CceecccCC
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNATQVEKLIKEHSVYLTKD-----GRISMAGVT 113 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~-----GRinvagl~ 113 (420)
..++.+.+++..+++.|.+.|++.. .+..+..+.|++++. +.+.+++...-.+++|++... -|+++..++
T Consensus 373 ~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~ 449 (514)
T 3mad_A 373 EGYLDATRRILQAADRLKAGVRAIP---SLKILGDPLWVIAVASDELNIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRH 449 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTST---TCEESSCCSSEEEEECSSSCHHHHHHHHHTTTCBCEEETTTTEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC---CeEEeCCCeEEEEEeCCCCCHHHHHHHHHhcCCEeccCCCCCeEEEEEecCC
Confidence 3466778899999999999998742 356666677888875 456666544334568887432 377777554
Q ss_pred --cCCHHHHHHHHHhh
Q psy16707 114 --SKNVGYLAKAIHAN 127 (420)
Q Consensus 114 --~~ni~~va~ai~~v 127 (420)
...|+.+.++|.++
T Consensus 450 ~~~e~i~~~l~~L~~~ 465 (514)
T 3mad_A 450 TEPGVVDRFLADLQDA 465 (514)
T ss_dssp GSTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 46899999888776
No 359
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=84.31 E-value=3.6 Score=39.87 Aligned_cols=100 Identities=8% Similarity=0.094 Sum_probs=59.8
Q ss_pred CccchHHHHHHHHhCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---ccc-ceeecCCCHHH--
Q psy16707 17 SPPIHGARIVQEILGDPKLKAQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIG-MFCYTGLNATQ-- 89 (420)
Q Consensus 17 ~PP~hGa~iv~~IL~~~~L~~~W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~G-mFs~~gL~~~q-- 89 (420)
+||..+..-+..-|. . ..++ ++.+++|...+++.|.+.|++.+. ..+.. +.+ +..+..-.++-
T Consensus 252 t~~~~~~~a~~aal~-----~-~~~~g~~~~~~~~~~l~~~l~~~l~~~g~----~~~~~~~~~~~~i~~~~~~~~~~~~ 321 (379)
T 3ke3_A 252 TMPTDSLRQFRDAIL-----E-AKEIGFDILRDAQWELGNRVRKVLTDKGI----ESVAAEGFEAPGVVVSYTERDDMHK 321 (379)
T ss_dssp CCCHHHHHHHHHHHH-----H-HHHHCHHHHHHHHHHHHHHHHHHHHHTTC----CBSBCTTCBCSSEEEEECSCHHHHS
T ss_pred CCCHHHHHHHHHHHH-----H-HHHhcHHHHHHHHHHHHHHHHHHHHHcCC----EecCCccccCceEEEEccCCcchHH
Confidence 666665544433332 1 1223 788999999999999999988753 22221 122 33333322332
Q ss_pred HHHHHHhcceEEcCC-----------C--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKD-----------G--RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~-----------G--Rinvag-l~~~ni~~va~ai~~v 127 (420)
.+.|. +++|++... + ||++.+ .+..+|++++++|.++
T Consensus 322 ~~~L~-~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~ 372 (379)
T 3ke3_A 322 GSAFA-EAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKA 372 (379)
T ss_dssp SHHHH-HTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHH
T ss_pred HHHHH-HCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHH
Confidence 45664 568886532 2 455444 4668999999998875
No 360
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=84.12 E-value=0.65 Score=48.51 Aligned_cols=80 Identities=14% Similarity=0.177 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------------------HHHHHHHHHhcceEE
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------------------ATQVEKLIKEHSVYL 101 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---------------------~~qv~~L~~~~~IY~ 101 (420)
++.++++++..|..|.+.|. . .|.....+.|||.+..+. .+.+.++-++++|.+
T Consensus 409 ~~~~r~~~~~r~~~l~~~L~-~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v 483 (546)
T 2zy4_A 409 KHTLKQLIRRRETTLYRELG-M----PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVL 483 (546)
T ss_dssp HHHHHHHHHHHHHHHHGGGT-S----SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHhcC-C----CcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEE
Confidence 44556677777777777773 2 244445688888655432 244666778889988
Q ss_pred cC-------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707 102 TK-------DG--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 102 ~~-------~G--Rinvagl~~~ni~~va~ai~~v 127 (420)
.+ .| |||++..+..+++.++++|.++
T Consensus 484 ~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~ 518 (546)
T 2zy4_A 484 LPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKM 518 (546)
T ss_dssp EESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHH
T ss_pred eCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 75 34 9999988999999999998876
No 361
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=83.94 E-value=3.1 Score=39.62 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=62.1
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCC-cccc----ccccceeec-C--
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLT--EVKGMADRIISMRQSLKDNLQKEGSNKPW-NHIT----DQIGMFCYT-G-- 84 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~--el~~m~~Ri~~~R~~l~~~L~~~~~~~~w-~~i~----~Q~GmFs~~-g-- 84 (420)
..+||..+...+..-|. . ..+ .++.++++++.+|+.|.+.|++.+ .| .... ...+++++. +
T Consensus 237 ~~t~~~~~~~a~~~al~-----~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 307 (362)
T 2c0r_A 237 YNTPPSFGIYMVNEVLK-----W-IEERGGLEGVQQANRKKASLIYDAIDQSG---GFYRGCVDVDSRSDMNITFRLASE 307 (362)
T ss_dssp SSCCCHHHHHHHHHHHH-----H-HHHTTHHHHHHHHHHHHHHHHHHHHHTST---TSSEESSCGGGBCSSEEEEECSCH
T ss_pred CCCchHHHHHHHHHHHH-----H-HHHhCCHHHHHHHHHHHHHHHHHHHHHcC---CccccCCChHHcCCcEEEEEcCCc
Confidence 35677665555544442 1 123 378899999999999999998865 12 2211 123444442 1
Q ss_pred CCHHHH-HHHHHhcceEEcC----CC--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 85 LNATQV-EKLIKEHSVYLTK----DG--RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 85 L~~~qv-~~L~~~~~IY~~~----~G--Rinvag-l~~~ni~~va~ai~~v 127 (420)
.+.+++ +.| ++.+|.+.+ .| ||++.. .+..++++++++|.++
T Consensus 308 ~~~~~~~~~L-~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 357 (362)
T 2c0r_A 308 ELEKEFVKAS-EQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHF 357 (362)
T ss_dssp HHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHH-HHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 223344 455 566886643 12 677654 3578999999998775
No 362
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=83.86 E-value=1.7 Score=43.62 Aligned_cols=102 Identities=6% Similarity=-0.076 Sum_probs=58.9
Q ss_pred CCceeecccccccCCCCCCchHHHH-H-HHHH---HHccCCCCCCCC---CCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707 160 VNKINLGVGAYRDDQGKPYVLPSVK-Q-ADEI---VLNKNLDKEYAP---IIGAPDFGKLAAQLAYGEDCPQLKDNLISI 231 (420)
Q Consensus 160 ~~kInL~iG~y~d~dg~~~~~~~V~-~-a~~~---~~~~~~~~~Y~p---~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~ 231 (420)
...+|+..|.|-.+=| ...|.|. + |... ...+ ..+ |.+ ..-..+|.+.+++++ +. ...++|
T Consensus 54 ~~ylD~~~~~~~~~lG--~~~p~v~~~~A~~~~~~~~~~-~~~-~~~~~~~~~~~~la~~la~~~-~~----~~~~~v-- 122 (449)
T 2cjg_A 54 RRYLDMFTFVASSALG--MNPPALVDDREFHAELMQAAL-NKP-SNSDVYSVAMARFVETFARVL-GD----PALPHL-- 122 (449)
T ss_dssp CEEEESSHHHHTCSSC--BSCHHHHTCHHHHHHHHHHHT-CCC-CTTTCCCHHHHHHHHHHHHHH-CC----TTCCEE--
T ss_pred cEEEEccCCccccCCC--CCCHHHHHHHHHHHHHHHHHh-cCC-CCcccCCHHHHHHHHHHHHhc-CC----CCCCEE--
Confidence 3467887776544445 2345555 4 5444 3322 222 332 222355666666655 21 123444
Q ss_pred ecccCCCCccccccccccceeecccchHHHHHHHHHHHhc-----------CCCCCEEEEcCCCCCCcHHHH
Q psy16707 232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-----------FPGEKVIYVPTPTWGNHIPIC 292 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-----------~p~gd~VlvpdP~w~ny~~i~ 292 (420)
+.|.|||.|+..++.++..+ .|.+|.|++++|+|..+....
T Consensus 123 --------------------~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~ 174 (449)
T 2cjg_A 123 --------------------FFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT 174 (449)
T ss_dssp --------------------EEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG
T ss_pred --------------------EEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccch
Confidence 56999999999887643211 122789999999999877544
No 363
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=83.73 E-value=2.4 Score=42.36 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=64.0
Q ss_pred cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------CCCcccccc----ccc-ee
Q psy16707 14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN-------KPWNHITDQ----IGM-FC 81 (420)
Q Consensus 14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~-------~~w~~i~~Q----~Gm-Fs 81 (420)
..++||..+..-...-|. +..+| .++.+++++..++..|.+.|++.-.+ ..+..+..+ .|. ++
T Consensus 330 ~~gt~~~~~~~a~~aal~---~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~ 404 (465)
T 3e9k_A 330 RISNPPILLVCSLHASLE---IFKQA--TMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLT 404 (465)
T ss_dssp CCSCCCHHHHHHHHHHHH---HHHHH--CHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEE
T ss_pred ccCCccHHHHHHHHHHHH---HHHHc--CHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEE
Confidence 344677665544443332 22222 38899999999999999999874211 124444322 344 44
Q ss_pred ec-CCC-HHHHHHHHHhcceEEcCC--C--ceec--ccCCcCCHHHHHHHHHhh
Q psy16707 82 YT-GLN-ATQVEKLIKEHSVYLTKD--G--RISM--AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 82 ~~-gL~-~~qv~~L~~~~~IY~~~~--G--Rinv--agl~~~ni~~va~ai~~v 127 (420)
+. +.. .+-.+.|. +++|.+... + ||++ ...+..+|+.++++|.++
T Consensus 405 ~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~ 457 (465)
T 3e9k_A 405 ITFSVPNKDVFQELE-KRGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSI 457 (465)
T ss_dssp EEECCTTCCHHHHHH-TTTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHH-HCCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHH
Confidence 31 222 34456665 558876533 4 5555 334678899999999887
No 364
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=83.13 E-value=1.6 Score=44.10 Aligned_cols=39 Identities=21% Similarity=0.093 Sum_probs=30.6
Q ss_pred ecccchHHHHHHHHHHHhcCCCCCEEEEcC-CCCCCcHHHHhh
Q psy16707 253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPT-PTWGNHIPICKH 294 (420)
Q Consensus 253 qt~gGtgal~~~~~~l~~~~p~gd~Vlvpd-P~w~ny~~i~~~ 294 (420)
+..|||+|+..++.. .+.| ||+|++++ |+|+.+...+..
T Consensus 88 ~~~sGt~Ai~~al~a--l~~~-Gd~Vl~~~~~~y~~~~~~~~l 127 (431)
T 3ht4_A 88 QIISGTHAISTALFG--ILRP-GDELLYITGKPYDTLEEIVGV 127 (431)
T ss_dssp TSCSHHHHHHHHHHT--TCCT-TCEEEECSSSCCTTHHHHTTS
T ss_pred eeeCHHHHHHHHHHH--hCCC-CCEEEEeCCCCchhHHHHHhh
Confidence 355899999888753 3557 99999999 999999876643
No 365
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=82.76 E-value=1.6 Score=42.31 Aligned_cols=82 Identities=11% Similarity=0.153 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CCCHHHHHHHHHhcceEEcCC--Cceecc---cCCcCC
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNATQVEKLIKEHSVYLTKD--GRISMA---GVTSKN 116 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~--GRinva---gl~~~n 116 (420)
+.++++++.+|+.|.+.|++.+.+ .+.....+-+|+++. +-..+-++.|. +++|++.+. +.|-++ ..+..+
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~iRi~~~~~~~~~~ 379 (392)
T 3ruy_A 302 EKLTERSLQLGEKLVGQLKEIDNP-MITEVRGKGLFIGIELNEPARPYCEQLK-AAGLLCKETHENVIRIAPPLVISEED 379 (392)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCT-TEEEEEEETTEEEEEESSCSHHHHHHHH-TTTEECCCBTTTEEEECCCTTCCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeeeEEEEEEcchHHHHHHHHH-HCCcEEecCCCCEEEEECCCCCCHHH
Confidence 577889999999999999877542 122222333344433 22344455665 789998765 445544 567789
Q ss_pred HHHHHHHHHhh
Q psy16707 117 VGYLAKAIHAN 127 (420)
Q Consensus 117 i~~va~ai~~v 127 (420)
++.++++|.++
T Consensus 380 i~~~~~~l~~~ 390 (392)
T 3ruy_A 380 LEWAFQKIKAV 390 (392)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 366
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=82.73 E-value=0.88 Score=43.41 Aligned_cols=78 Identities=14% Similarity=0.297 Sum_probs=54.1
Q ss_pred HHHHHH--HHHHHHHHHHHHhcCCCCCCccccc---cccceeecCC-CHHHHHHHHHhcceEEcC-------CC------
Q psy16707 45 GMADRI--ISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYTGL-NATQVEKLIKEHSVYLTK-------DG------ 105 (420)
Q Consensus 45 ~m~~Ri--~~~R~~l~~~L~~~~~~~~w~~i~~---Q~GmFs~~gL-~~~qv~~L~~~~~IY~~~-------~G------ 105 (420)
.+.+++ +.+|+.|.+.|++.+ |..+.. +.+|+++ -+ +.+++...-.+++|++.+ .|
T Consensus 267 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~i 341 (371)
T 2e7j_A 267 RIKRWDEEVEKARRFAAEMEKLG----IKQLGDNPHNHDLMFF-HAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLT 341 (371)
T ss_dssp HGGGHHHHHHHHHHHHHHHHHTT----CEEESSSSCCSSEEEE-ECHHHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC----cEEecCCCccCceEEE-ECCCHHHHHHHHHHCCEEEEeccccccccCCCCCce
Confidence 677888 899999999998762 444443 3455444 33 444444333477888754 13
Q ss_pred c-eeccc--CCcCCHHHHHHHHHhh
Q psy16707 106 R-ISMAG--VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 R-invag--l~~~ni~~va~ai~~v 127 (420)
| |+++. .+.+++++++++|.++
T Consensus 342 Rii~~~~~~~~~~~i~~~~~~l~~~ 366 (371)
T 2e7j_A 342 RYFKLSTYGLSDEEVDYVLNAFKEI 366 (371)
T ss_dssp SEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeeccCCCHHHHHHHHHHHHHH
Confidence 8 99987 6899999999999876
No 367
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=82.45 E-value=5 Score=39.38 Aligned_cols=84 Identities=12% Similarity=0.119 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc------cceeec------CCCHHHHHHHHHhcceEEcCCC---
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI------GMFCYT------GLNATQVEKLIKEHSVYLTKDG--- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~------GmFs~~------gL~~~qv~~L~~~~~IY~~~~G--- 105 (420)
+.++.+.+|...+++.|.+.|++. + .|..+.... .+|++. |.+.+++...-.+++|++....
T Consensus 257 ~~~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~ 333 (424)
T 2po3_A 257 DAFPEVIDRNRRNHAAYREHLADL--P-GVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPG 333 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSC--T-TEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC--C-CccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCc
Confidence 456677888888888888888653 2 244443211 344431 5677777666677899986521
Q ss_pred -------------------c-----eec---ccCCcCCHHHHHHHHHhh
Q psy16707 106 -------------------R-----ISM---AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 -------------------R-----inv---agl~~~ni~~va~ai~~v 127 (420)
| |++ ..++..++++++++|.++
T Consensus 334 ~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~ 382 (424)
T 2po3_A 334 CHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLC 382 (424)
T ss_dssp GGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred cccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence 1 555 566788899999888876
No 368
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=81.97 E-value=1.2 Score=45.36 Aligned_cols=107 Identities=10% Similarity=0.002 Sum_probs=66.4
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccC---CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN---LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGI 235 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~---~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~ 235 (420)
+...||+..|.|-..=| ...|.|.+|........ ....|.. ....++++++++.+.....+ ..++|
T Consensus 62 G~~ylD~~~g~~~~~lG--h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~~v------ 130 (472)
T 1ohv_A 62 GNRMLDLYSQISSIPIG--YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMSQL------ 130 (472)
T ss_dssp SCEEEESSHHHHTCSSC--BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCCEE------
T ss_pred CCEEEECCCCHhhcccC--CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcCEE------
Confidence 45689999887655556 34566666654432110 0112322 34678999998865332111 12344
Q ss_pred CCCCccccccccccceeecccchHHHHHHHHHHHhc-----------------------CCCC---CEEEEcCCCCCCcH
Q psy16707 236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-----------------------FPGE---KVIYVPTPTWGNHI 289 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-----------------------~p~g---d~VlvpdP~w~ny~ 289 (420)
+.+.|||.|...++.++..+ .| | +.|++.+|+|..+.
T Consensus 131 ----------------~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~-g~~r~~ii~~~~~yHg~~ 193 (472)
T 1ohv_A 131 ----------------ITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAP-GCPDYSILSFMGAFHGRT 193 (472)
T ss_dssp ----------------EEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTT-TSCCCEEEEETTCCCCSS
T ss_pred ----------------EEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccc-cCCCCeEEEECCCccccc
Confidence 56999999999888755321 14 5 89999999999888
Q ss_pred HHHh
Q psy16707 290 PICK 293 (420)
Q Consensus 290 ~i~~ 293 (420)
....
T Consensus 194 ~~~~ 197 (472)
T 1ohv_A 194 MGCL 197 (472)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 369
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=81.47 E-value=7.9 Score=36.28 Aligned_cols=102 Identities=10% Similarity=0.100 Sum_probs=63.3
Q ss_pred CCCccchHHHHHHHHhCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-----ccccceee--cCCC
Q psy16707 15 YSSPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-----DQIGMFCY--TGLN 86 (420)
Q Consensus 15 yS~PP~hGa~iv~~IL~~~~L~~~W~~-el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-----~Q~GmFs~--~gL~ 86 (420)
+.+|+..+...+...|. .+.+ .++.+.+++...|+.|.+.|++.. | +..+. ...+++++ .+ +
T Consensus 241 ~~~~~~~~~~~~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g-~~~~~~~~~~~~~~~~~~~~~~-~ 310 (362)
T 3ffr_A 241 PETPNAMNIFLLGKVTG------DMLQISADGIRKQTEEKAALINTYIESSK--V-FSFGVEDAKLRSMTTIVANTTM-L 310 (362)
T ss_dssp SSCCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHCS--S-EEESSSCGGGBCSSEEEEEESS-C
T ss_pred CCCchHHHHHHHHHHHH------HHHHccHHHHHHHHHHHHHHHHHHHHHcc--C-ceeccCChhhcCCceEEEecCC-C
Confidence 56666665544444432 1112 278899999999999999998751 1 22222 12344443 24 4
Q ss_pred HHH-HHHHHHhcceEEcC------CC--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707 87 ATQ-VEKLIKEHSVYLTK------DG--RISMAG-VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 87 ~~q-v~~L~~~~~IY~~~------~G--Rinvag-l~~~ni~~va~ai~~v 127 (420)
.++ ++.|+++ +|.+.+ .+ ||++.. .+...|+.++++|.++
T Consensus 311 ~~~~~~~l~~~-gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 311 PGEINKILEPF-DMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp HHHHHHHHGGG-TEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 444 4567655 998863 22 677654 4678899999999876
No 370
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=80.05 E-value=1.9 Score=42.49 Aligned_cols=83 Identities=12% Similarity=0.187 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH------------------HHHHHHHHhcceEEcCCC
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA------------------TQVEKLIKEHSVYLTKDG 105 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~------------------~qv~~L~~~~~IY~~~~G 105 (420)
+.+.++++.+++.|.+.|++......+.......|+|...-+.+ +=++.|. +++|++.+.|
T Consensus 320 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~ 398 (424)
T 2e7u_A 320 PGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSN 398 (424)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccC
Confidence 44566677777777777765311011222234556665443321 2334565 6899998655
Q ss_pred --ceec-ccCCcCCHHHHHHHHHhh
Q psy16707 106 --RISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 --Rinv-agl~~~ni~~va~ai~~v 127 (420)
|+.+ ...+..+++.++++|.++
T Consensus 399 ~~~~~~~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 399 FEAAFLSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp SSCEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCceEeeccCCHHHHHHHHHHHHHh
Confidence 4433 346778899999988764
No 371
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=79.92 E-value=1.7 Score=47.21 Aligned_cols=44 Identities=2% Similarity=-0.031 Sum_probs=34.7
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.|+|.|+..+...+ +.| ||.|+++.|+|.++...+..+|++
T Consensus 215 ~v~nGts~An~~ai~al--~~p-GD~VLv~r~~H~S~~~~l~lsGa~ 258 (715)
T 3n75_A 215 MVTNGTSTANKIVGMYS--APA-GSTILIDRNCHKSLTHLMMMSDVT 258 (715)
T ss_dssp EESSHHHHHHHHHHHHH--CCT-TCEEEEESSCCHHHHHHHHHSCCE
T ss_pred EECcHHHHHHHHHHHHh--CCC-CCEEEECCCccHHHHHHHHHcCCE
Confidence 45666678877766533 568 999999999999999888888764
No 372
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=79.70 E-value=3.5 Score=40.16 Aligned_cols=77 Identities=12% Similarity=0.111 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----HHHHHHHHHhcceEEc-------CC----Cce
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLT-------KD----GRI 107 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-----~~qv~~L~~~~~IY~~-------~~----GRi 107 (420)
+.+++++..+|+.|.+.|++.+ |... ..|+|...-+. .+-++.|.++ +|++. +. =||
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~g----~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~~iRi 379 (409)
T 3kki_A 307 DNRRQHLDRMARKLRIGLSQLG----LTIR--SESQIIGLETGDERNTEKVRDYLESN-GVFGSVFCRPATSKNKNIIRL 379 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT----CCCC--CSSSEEEEEEESHHHHHHHHHHHHHT-TEECEEECTTSSCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----CccC--CCCCEEEEEeCCHHHHHHHHHHHHHC-CceEeeeCCCCcCCCCcEEEE
Confidence 6788899999999999998874 4433 35555544332 2235667655 99983 22 256
Q ss_pred ecc-cCCcCCHHHHHHHHHhh
Q psy16707 108 SMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 108 nva-gl~~~ni~~va~ai~~v 127 (420)
++. ..+...|+.++++|.++
T Consensus 380 ~~~~~~t~e~i~~~~~~l~~~ 400 (409)
T 3kki_A 380 SLNSDVNDEQIAKIIEVCSDA 400 (409)
T ss_dssp ECCTTCCHHHHHHHHHHHHHH
T ss_pred EccCCCCHHHHHHHHHHHHHH
Confidence 665 35779999999999887
No 373
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=79.04 E-value=11 Score=37.47 Aligned_cols=82 Identities=18% Similarity=0.308 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-----CCCCCCcccc--cccccee--e--cCCCHHHHHHHHHhcceEEcCCC-----
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKE-----GSNKPWNHIT--DQIGMFC--Y--TGLNATQVEKLIKEHSVYLTKDG----- 105 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~-----~~~~~w~~i~--~Q~GmFs--~--~gL~~~qv~~L~~~~~IY~~~~G----- 105 (420)
+++.+.+++...++.|.+.|++. + |..+. .+..++. + .|++.+.+..+.++++|.+..++
T Consensus 299 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~ 374 (447)
T 3h7f_A 299 EFADRQRRTLSGARIIADRLMAPDVAKAG----VSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDP 374 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSHHHHHTT----CEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCC----eEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCC
Confidence 45677788888888888888765 3 33322 1221222 1 26788888888888899876321
Q ss_pred ---------ceecc-----cCCcCCHHHHHHHHHhh
Q psy16707 106 ---------RISMA-----GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 ---------Rinva-----gl~~~ni~~va~ai~~v 127 (420)
||+.. |+++..++.++++|.++
T Consensus 375 ~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~ 410 (447)
T 3h7f_A 375 RPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATA 410 (447)
T ss_dssp ------CEEEEECHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHH
Confidence 22211 26677788888877766
No 374
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=78.96 E-value=6 Score=37.10 Aligned_cols=79 Identities=13% Similarity=0.171 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHhcceEEcC----CC--ceecc-cCCcCCHH
Q psy16707 46 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK----DG--RISMA-GVTSKNVG 118 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~~~IY~~~----~G--Rinva-gl~~~ni~ 118 (420)
+.+++..+|+.|.+.|++. + .+.......+.|.+..+..+-++.|. +++|.+.+ .+ ||++. ..+..+++
T Consensus 265 ~~~~~~~~~~~l~~~L~~~--~-g~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~iRi~~~~~~~~~~i~ 340 (356)
T 1v72_A 265 NARKANAAAQRLAQGLEGL--G-GVEVLGGTEANILFCRLDSAMIDALL-KAGFGFYHDRWGPNVVRFVTSFATTAEDVD 340 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTC--T-TEEEESCCCSSEEEEEECHHHHHHHH-HTTCBCBCSSSSTTEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhC--C-CcEEccCCCccEEEEEcCHHHHHHHH-hcCeEEeccccCCCeEEEEecCCCCHHHHH
Confidence 4667788888888888763 1 24444456677777777777777785 56888763 23 56644 34678999
Q ss_pred HHHHHHHhhC
Q psy16707 119 YLAKAIHANG 128 (420)
Q Consensus 119 ~va~ai~~v~ 128 (420)
.++++|.++.
T Consensus 341 ~~~~~l~~~l 350 (356)
T 1v72_A 341 HLLNQVRLAA 350 (356)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHH
Confidence 9999998873
No 375
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=78.56 E-value=8.3 Score=36.92 Aligned_cols=85 Identities=9% Similarity=0.140 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc------cccccc-eee--c----CCCHHHHHHHHHhcceEEcCCC
Q psy16707 39 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI------TDQIGM-FCY--T----GLNATQVEKLIKEHSVYLTKDG 105 (420)
Q Consensus 39 W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i------~~Q~Gm-Fs~--~----gL~~~qv~~L~~~~~IY~~~~G 105 (420)
|.+.++.+.++...+++.|.+.|++.+ +... ....++ |++ . |.+.+++...-.+++|++....
T Consensus 255 ~l~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~ 330 (393)
T 1mdo_A 255 QLQKLDALNARRAAIAAQYHQAMADLP----FQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHF 330 (393)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHTSS----CEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC----cccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCccccc
Confidence 445567777788889999999998753 2221 112333 332 2 4666766544456798775421
Q ss_pred -----------------------------ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 106 -----------------------------RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 -----------------------------Rinva-gl~~~ni~~va~ai~~v 127 (420)
||++. .++..+|++++++|.++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 382 (393)
T 1mdo_A 331 RAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI 382 (393)
T ss_dssp CCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 22222 25677788888887765
No 376
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=77.57 E-value=1 Score=43.02 Aligned_cols=81 Identities=5% Similarity=0.028 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCC-----CCceEEec--C---C-CHHHH-HHHHHhCCeEEe----CC-
Q psy16707 334 VKGMADRIISMRQSLKDNLQKE-GSNKPWNHITD-----QIGMFCYT--G---L-NATQV-EKLIKEHSVYLT----KD- 395 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~-----q~GmF~~~--~---l-~~~~v-~~Ll~e~~Vy~~----p~- 395 (420)
++.+.+++++.++.+.+.|+++ | +....+ ..+.+.++ + . +.+.+ +.| .++||++. |+
T Consensus 246 ~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gi~v~~~~~p~~ 320 (375)
T 2fnu_A 246 APFLMQKREEAALTYDRIFKDNPY----FTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESL-HKRGILAQVHYKPIY 320 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSS----EEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHH-HHTTEECBCCCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCC----ccccCCCCCCCcceEEEEEEeCccccchHHHHHHHH-HHCCCCccccccccc
Confidence 3455578888899999999875 3 333322 12233232 2 2 44444 566 67899987 21
Q ss_pred ------------------------CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 396 ------------------------GRISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ------------------------gRis~ag-l~~~ni~~la~AI~~vv 419 (420)
-||++.. .+.+.+++++++|++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 369 (375)
T 2fnu_A 321 QYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTF 369 (375)
T ss_dssp GSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred cchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 2777664 36788999999998874
No 377
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=75.04 E-value=9.3 Score=37.24 Aligned_cols=83 Identities=16% Similarity=0.290 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCC-----CC---ceEEecC--CCHHHH-HHHHHhCCeEEeC-----
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITD-----QI---GMFCYTG--LNATQV-EKLIKEHSVYLTK----- 394 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~-----q~---GmF~~~~--l~~~~v-~~Ll~e~~Vy~~p----- 394 (420)
+.++.+.++++++|+.+.+.|+++ |.. .....+ .. ..|.+.+ .+.+.+ +.+ .+|.+.+
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~~~G~~~~ 376 (432)
T 3a9z_A 302 ENCETYEAHMRDIRDYLEERLEAEFGKR--IHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC---QTLLASVGASCH 376 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGG--EEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC---SSEECBSSCGGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCc--EEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh---cCeEEecccccc
Confidence 346777799999999999999884 521 000011 11 2334443 234333 322 1232211
Q ss_pred ----------------------C-CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707 395 ----------------------D-GRISMAGV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 ----------------------~-gRis~agl-~~~ni~~la~AI~~vv 419 (420)
+ -||++... +.++++++.++|.+++
T Consensus 377 ~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~ 425 (432)
T 3a9z_A 377 SDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAV 425 (432)
T ss_dssp GGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 2 29999854 5889999999998864
No 378
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=74.61 E-value=4.6 Score=24.53 Aligned_cols=21 Identities=19% Similarity=0.542 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy16707 38 QWLTEVKGMADRIISMRQSLK 58 (420)
Q Consensus 38 ~W~~el~~m~~Ri~~~R~~l~ 58 (420)
+-++||+.+.+|+.++|++|.
T Consensus 5 elykeledlqerlrklrkklr 25 (27)
T 3twe_A 5 ELYKELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 457899999999999999875
No 379
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=74.60 E-value=2.2 Score=46.49 Aligned_cols=44 Identities=5% Similarity=-0.116 Sum_probs=34.0
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH-HhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI-CKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i-~~~aG~~ 298 (420)
+.+.|+|.++..+...+ +.| ||.|+++.|+|+++... ++.+|++
T Consensus 193 ~v~nGtt~an~~ai~al--~~p-GD~VLv~~~~H~S~~~~~~~l~Ga~ 237 (730)
T 1c4k_A 193 FVLGGSSNANNTVTSAL--VSN-GDLVLFDRNNHKSVYNSALAMAGGR 237 (730)
T ss_dssp EESSHHHHHHHHHHHHH--CCT-TCEEEEETTCCHHHHHHHTTTTCCE
T ss_pred EECCHHHHHHHHHHHHh--cCC-CCEEEEcCCchHHHHHHHHHHCCCE
Confidence 56777788988887644 557 99999999999887776 6666653
No 380
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=73.77 E-value=3.6 Score=40.25 Aligned_cols=82 Identities=20% Similarity=0.119 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC-CCC-ceEE------ec------CCCHH-HHHHHHHhCCeE---EeC
Q psy16707 334 VKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT-DQI-GMFC------YT------GLNAT-QVEKLIKEHSVY---LTK 394 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~-~q~-GmF~------~~------~l~~~-~v~~Ll~e~~Vy---~~p 394 (420)
++.+.++.++.++.+.+.|+++ | +.... ++. |.+. .+ +.+.+ .++.|.+++||+ +.+
T Consensus 265 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~ 340 (418)
T 2c81_A 265 LDDKNAIREKNAMFLNDALSKIDG----IKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHP 340 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTT----EEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCC----cccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccc
Confidence 3444566667778888888765 3 44332 333 2221 12 34554 457776666999 654
Q ss_pred C------------------------------------------C--cEEEc-cc-CCCCHHHHHHHHHHHh
Q psy16707 395 D------------------------------------------G--RISMA-GV-TSKNVGYLAKAIHAVT 419 (420)
Q Consensus 395 ~------------------------------------------g--Ris~a-gl-~~~ni~~la~AI~~vv 419 (420)
+ + ||++. .+ +.++|++++++|.+++
T Consensus 341 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~ 411 (418)
T 2c81_A 341 PYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELA 411 (418)
T ss_dssp CCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHH
T ss_pred cccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHH
Confidence 2 1 56653 23 7889999999999875
No 381
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=73.60 E-value=10 Score=38.80 Aligned_cols=32 Identities=16% Similarity=0.311 Sum_probs=26.9
Q ss_pred hcceEEcCCCceecc-cCCcCCHHHHHHHHHhh
Q psy16707 96 EHSVYLTKDGRISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 96 ~~~IY~~~~GRinva-gl~~~ni~~va~ai~~v 127 (420)
+.+||+.++|++.++ -+++.+||.+++||.++
T Consensus 410 ~~Gv~~~p~~~~~~s~~~T~~dId~~l~al~~~ 442 (454)
T 4ao9_A 410 NEDIYSSPRGFVVLSLPLTDADIDRYVAAIGSF 442 (454)
T ss_dssp HTTEECCTTCEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HCCEEEcCCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 569999999987543 37889999999999987
No 382
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=73.29 E-value=3.6 Score=40.40 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=27.5
Q ss_pred HHHHHHHhcceEEcCCC--ceecccC-CcCCHHHHHHHHHhh
Q psy16707 89 QVEKLIKEHSVYLTKDG--RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 qv~~L~~~~~IY~~~~G--Rinvagl-~~~ni~~va~ai~~v 127 (420)
-++.|. +++|++.+.| |+.++.. +..+++.+.++|.++
T Consensus 383 l~~~l~-~~Gi~v~~~~~~r~~~~~~~t~e~i~~~l~~l~~~ 423 (427)
T 3fq8_A 383 FHRGML-EQGIYLAPSQFEAGFTSLAHTEEDIDATLAAARTV 423 (427)
T ss_dssp HHHHHH-HTTEECCSSTTSCEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHH-HCCcEEecCCCCCEEeeCcCCHHHHHHHHHHHHHH
Confidence 344554 5699998776 7776544 668899999988775
No 383
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=71.43 E-value=11 Score=36.24 Aligned_cols=83 Identities=13% Similarity=0.069 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc------ccc--ceeec-----CCCHHHHHHHHHhcceEEcCCC--
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD------QIG--MFCYT-----GLNATQVEKLIKEHSVYLTKDG-- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~------Q~G--mFs~~-----gL~~~qv~~L~~~~~IY~~~~G-- 105 (420)
+.++.+.+|.+.+++.+.+.|++.+ +..... +.+ +|.+. |.+.+++...-.+++|++....
T Consensus 265 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p 340 (391)
T 3dr4_A 265 ERVDEHLAARERVVGWYEQKLARLG----NRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHP 340 (391)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHGGGT----TSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC----ccccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCc
Confidence 4556677888888889999998763 222211 112 33432 4556665544456699876332
Q ss_pred --------------------------ceec-ccCCcCCHHHHHHHHHhh
Q psy16707 106 --------------------------RISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 --------------------------Rinv-agl~~~ni~~va~ai~~v 127 (420)
||++ ..++..+|++++++|.++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 341 MHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp GGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred cccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 1111 235667788888877664
No 384
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=71.09 E-value=2.2 Score=41.22 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-CCCccccccccceeecCC------CHHH-HHHHHHhcceEEcCCC----ceec-c
Q psy16707 44 KGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYTGL------NATQ-VEKLIKEHSVYLTKDG----RISM-A 110 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~~~-~~w~~i~~Q~GmFs~~gL------~~~q-v~~L~~~~~IY~~~~G----Rinv-a 110 (420)
+.+.++++.+|+.|.+.|++.+.. ..|..+ ...|+|...-+ +.++ ++.|.+ ++|++.+.| ||++ .
T Consensus 302 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~iRi~~~~ 379 (406)
T 4adb_A 302 PEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLNADYAGQAKQISQEAAK-AGVMVLIAGGNVVRFAPAL 379 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECTTTTTCHHHHHHHHHH-TTEECEESSTTEEEECCCT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEeCCcHHHHHHHHHHHHH-CCcEEeecCCCeEEEECCC
Confidence 466777777777777777664321 122222 23455443322 2344 455654 589887654 4432 4
Q ss_pred cCCcCCHHHHHHHHHhh
Q psy16707 111 GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 111 gl~~~ni~~va~ai~~v 127 (420)
..+..+++.++++|.++
T Consensus 380 ~~~~e~i~~~~~~l~~~ 396 (406)
T 4adb_A 380 NVSEEEVTTGLDRFAAA 396 (406)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 56778899999988775
No 385
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=70.92 E-value=2.8 Score=41.69 Aligned_cols=36 Identities=8% Similarity=0.029 Sum_probs=26.9
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI 291 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i 291 (420)
+.+.+|+.|+..+. +.+.| ||.|++++|+|+.....
T Consensus 86 ~~~~sG~~Ai~~~~---~l~~~-gd~Vi~~~~~y~~~~~~ 121 (400)
T 3nmy_A 86 FAFASGMAATSTVM---ELLDA-GSHVVAMDDLYGGTFRL 121 (400)
T ss_dssp EEESSHHHHHHHHH---TTSCT-TCEEEEESSCCHHHHHH
T ss_pred EEecCHHHHHHHHH---HHcCC-CCEEEEeCCCchHHHHH
Confidence 56788899998742 34557 99999999999943333
No 386
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=70.84 E-value=10 Score=38.52 Aligned_cols=84 Identities=15% Similarity=0.332 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC-CCCceEEecCC--------C-HH-----------HHHHHHHhCC
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT-DQIGMFCYTGL--------N-AT-----------QVEKLIKEHS 389 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~-~q~GmF~~~~l--------~-~~-----------~v~~Ll~e~~ 389 (420)
+.++.+.++..+.++.+.+.|++. | |+.+. +..+.|+|... + .+ ..+.|.++-.
T Consensus 397 ~g~~~~~~~~~~~a~~l~~~L~~~~g----~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~ 472 (515)
T 2jis_A 397 QGLERRIDQAFVLARYLVEEMKKREG----FELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGS 472 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTT----EEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----EEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCC
Confidence 345667788889999999999886 3 55443 34566666211 1 11 2345544433
Q ss_pred eEEe----CC----CcEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707 390 VYLT----KD----GRISMAG--VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 390 Vy~~----p~----gRis~ag--l~~~ni~~la~AI~~vv 419 (420)
+++. ++ -||++++ .+.+.|+++.++|.++.
T Consensus 473 ~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~ 512 (515)
T 2jis_A 473 MMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLG 512 (515)
T ss_dssp CEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 4443 22 1898853 47778999999998875
No 387
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=70.50 E-value=5.1 Score=43.63 Aligned_cols=44 Identities=16% Similarity=0.000 Sum_probs=34.1
Q ss_pred eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707 252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298 (420)
Q Consensus 252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~ 298 (420)
+.+.|+|+++..+...+ +.| ||.|+++.|+++++...+..+|++
T Consensus 225 ~~~~Gtt~a~~~~i~al--~~~-GD~Vlv~~~~h~s~~~~~~~~G~~ 268 (755)
T 2vyc_A 225 SVVVGTSGSNRTIMQAC--MTD-NDVVVVDRNCHKSIEQGLMLTGAK 268 (755)
T ss_dssp EESSHHHHHHHHHHHHH--CCT-TCEEEEESSCCHHHHHHHHHHCCE
T ss_pred EECCcHHHHHHHHHHHh--cCC-CCEEEECCCchHHHHHHHHHcCCE
Confidence 56777789888887644 557 999999999998877766666553
No 388
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=67.88 E-value=8.6 Score=37.33 Aligned_cols=78 Identities=8% Similarity=0.008 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCCCccc-CCCCceEEec-----CCCHHHH-HHHHHhCCeEEeCC-------------
Q psy16707 337 MADRIISMRQSLKDNLQKE-GSNKPWNHI-TDQIGMFCYT-----GLNATQV-EKLIKEHSVYLTKD------------- 395 (420)
Q Consensus 337 m~~r~~~~R~~l~~~L~~~-g~~~~w~~i-~~q~GmF~~~-----~l~~~~v-~~Ll~e~~Vy~~p~------------- 395 (420)
+.++.++.++.+.+.|+++ | +... .+..+.|.|. +.+.+.+ +.| .++||++.++
T Consensus 276 ~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~ 350 (399)
T 2oga_A 276 WNGRRSALAAEYLSGLAGLPG----IGLPVTAPDTDPVWHLFTVRTERRDELRSHL-DARGIDTLTHYPVPVHLSPAYAG 350 (399)
T ss_dssp HHHHHHHHHHHHHHHTTTCTT----CBCCCCCTTEECCCSSEEEECSSHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHT
T ss_pred HHHHHHHHHHHHHHHhccCCC----ccccCCCCCCcceeEEEEEECCCHHHHHHHH-HHCCCceecCCCCccccchhhcc
Confidence 3455566677788888765 3 3322 2334554431 2345555 555 6789998652
Q ss_pred ------------------CcEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 396 ------------------GRISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 396 ------------------gRis~a-gl~~~ni~~la~AI~~vv 419 (420)
-||++. ..+.+.+++++++|.+++
T Consensus 351 ~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 393 (399)
T 2oga_A 351 EAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWA 393 (399)
T ss_dssp TSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 155553 347889999999998875
No 389
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=67.75 E-value=16 Score=35.37 Aligned_cols=74 Identities=18% Similarity=0.145 Sum_probs=40.1
Q ss_pred HHHHHHHHHhcCCCCCCccccccccce-eecCCCHH--------HHHHHHHhcceEEcCC-----C----ceecccCCcC
Q psy16707 54 RQSLKDNLQKEGSNKPWNHITDQIGMF-CYTGLNAT--------QVEKLIKEHSVYLTKD-----G----RISMAGVTSK 115 (420)
Q Consensus 54 R~~l~~~L~~~~~~~~w~~i~~Q~GmF-s~~gL~~~--------qv~~L~~~~~IY~~~~-----G----Rinvagl~~~ 115 (420)
|+.|.+.|........|.......|.| ....+.+. -+..|.++++|.+.+. + ||++++....
T Consensus 274 ~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~ 353 (374)
T 2aeu_A 274 IEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAE 353 (374)
T ss_dssp HHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGG
T ss_pred HHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHH
Confidence 555555554432112244333444544 33334432 3346667889998642 1 7787654432
Q ss_pred --CHHHHHHHHHhh
Q psy16707 116 --NVGYLAKAIHAN 127 (420)
Q Consensus 116 --ni~~va~ai~~v 127 (420)
.++.+++++.++
T Consensus 354 ~~~l~~l~~~l~~~ 367 (374)
T 2aeu_A 354 RIDDNYIIKAIVES 367 (374)
T ss_dssp GSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 388888888765
No 390
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=67.54 E-value=14 Score=36.63 Aligned_cols=78 Identities=12% Similarity=0.141 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccc--cccccceeecCC------CHHH-HHHHHHhcceEEcCC--C--ceecc-
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHI--TDQIGMFCYTGL------NATQ-VEKLIKEHSVYLTKD--G--RISMA- 110 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i--~~Q~GmFs~~gL------~~~q-v~~L~~~~~IY~~~~--G--Rinva- 110 (420)
.+.++++.+++.|.+.|++.+ +..+ ....|+|...-+ +.++ ++.|+ +++|++.+. + ||+++
T Consensus 344 ~~~~~~~~~~~~l~~~L~~l~----~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~-~~Gv~v~~~~~~~iRi~~~~ 418 (439)
T 2oat_A 344 NLAENADKLGIILRNELMKLP----SDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPTHGDIIRFAPPL 418 (439)
T ss_dssp THHHHHHHHHHHHHHHHTTSC----TTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHH-HTTEECCBSSSSEEEECCCT
T ss_pred hHHHHHHHHHHHHHHHHHHhc----CCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHH-HCCeEEecCCCCEEEEECcc
Confidence 457788889999999998764 2222 345566544322 2333 45565 469998763 3 45444
Q ss_pred cCCcCCHHHHHHHHHhh
Q psy16707 111 GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 111 gl~~~ni~~va~ai~~v 127 (420)
..+..+++.++++|.++
T Consensus 419 ~~t~e~i~~~l~~l~~~ 435 (439)
T 2oat_A 419 VIKEDELRESIEIINKT 435 (439)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 46889999999998875
No 391
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=66.90 E-value=4.3 Score=39.28 Aligned_cols=81 Identities=10% Similarity=0.142 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCCCccccccccceeecCC----CHH-HHHHHHHhcceEEcCC--C--ceecc-c
Q psy16707 44 KGMADRIISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGL----NAT-QVEKLIKEHSVYLTKD--G--RISMA-G 111 (420)
Q Consensus 44 ~~m~~Ri~~~R~~l~~~L~~~~--~~~~w~~i~~Q~GmFs~~gL----~~~-qv~~L~~~~~IY~~~~--G--Rinva-g 111 (420)
+.++++++.+|+.|.+.|++.+ .+. +.. ....|+|...-+ +.+ -++.|.+ ++|++.+. + ||+++ .
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~iRis~~~~ 377 (397)
T 2ord_A 301 EGFLEEVEEKGNYLMKKLQEMKEEYDV-VAD-VRGMGLMIGIQFREEVSNREVATKCFE-NKLLVVPAGNNTIRFLPPLT 377 (397)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTT-EEE-EEEETTEEEEEECTTSCHHHHHHHHHH-TTEECEEETTTEEEECCCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCc-eEE-EEEEeEEEEEEECChHHHHHHHHHHHH-CCCEEccCCCCEEEEECCcC
Confidence 3567778888888888887652 221 111 234455544333 234 3456655 79988753 3 44543 6
Q ss_pred CCcCCHHHHHHHHHhh
Q psy16707 112 VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 112 l~~~ni~~va~ai~~v 127 (420)
.+..+++.++++|.++
T Consensus 378 ~~~e~i~~~~~~l~~~ 393 (397)
T 2ord_A 378 VEYGEIDLAVETLKKV 393 (397)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 7889999999998765
No 392
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=66.58 E-value=11 Score=36.87 Aligned_cols=79 Identities=11% Similarity=0.213 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHhcC-CCCCCccccccccceeecC----CCHHHH-HHHHHhcceEEcCC-Cceecc---cCCcC
Q psy16707 46 MADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTG----LNATQV-EKLIKEHSVYLTKD-GRISMA---GVTSK 115 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~-~~~~w~~i~~Q~GmFs~~g----L~~~qv-~~L~~~~~IY~~~~-GRinva---gl~~~ 115 (420)
+.+++..+|+.|.+.|++.+ .++ +.. ....|+|...- .+.+++ +.|. +++|++.+. +.|-|+ ..+..
T Consensus 332 ~~~~~~~~~~~l~~~L~~l~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~~iRis~~~~~t~e 408 (429)
T 1s0a_A 332 WQQQVADIEVQLREQLAPARDAEM-VAD-VRVLGAIGVVETTHPVNMAALQKFFV-EQGVWIRPFGKLIYLMPPYIILPQ 408 (429)
T ss_dssp HHHHHHHHHHHHHHHHGGGGGCTT-EEE-EEEETTEEEEEESSCBCHHHHHHHHH-HTTEECCCBTTEEEECCCTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-EEE-EEEeeEEEEEEECCcccHHHHHHHHH-HCCCEEeccCCEEEEECCCCCCHH
Confidence 45677778888888887653 121 222 23346654433 344444 5565 679998753 444444 67889
Q ss_pred CHHHHHHHHHhh
Q psy16707 116 NVGYLAKAIHAN 127 (420)
Q Consensus 116 ni~~va~ai~~v 127 (420)
+++.++++|.++
T Consensus 409 ~i~~~~~~l~~~ 420 (429)
T 1s0a_A 409 QLQRLTAAVNRA 420 (429)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999887
No 393
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=66.04 E-value=7.9 Score=38.06 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=25.2
Q ss_pred HHHHHHhcceEEcCC--C--ceecccCCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKD--G--RISMAGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~--G--Rinvagl~~~ni~~va~ai~~v 127 (420)
++.|. +++|++.+. + |+++ ..+..+++.+.++|.++
T Consensus 384 ~~~l~-~~Gv~v~~~~~~~~r~~~-~~t~e~i~~~l~~l~~~ 423 (429)
T 3k28_A 384 YREMV-EQGVFLPPSQFEGLFLST-VHSDADIEATIAAAEIA 423 (429)
T ss_dssp HHHHH-HTTEECCSSTTSCBCCCT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCeEEecCCCCCEEEEC-CCCHHHHHHHHHHHHHH
Confidence 35564 568998763 3 4443 56778899999988876
No 394
>4g3b_A Alpha4F3D; alpha helix, de novo designed, fluorinated protein, coiled-C NOVO protein; HET: 6FL; 1.19A {Synthetic} PDB: 4g4l_A* 3twg_A*
Probab=65.55 E-value=9.6 Score=22.92 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy16707 37 AQWLTEVKGMADRIISMRQSLK 58 (420)
Q Consensus 37 ~~W~~el~~m~~Ri~~~R~~l~ 58 (420)
.+.++||+...+|+.+.|++|.
T Consensus 4 de~ykeled~qerlrk~rkklr 25 (26)
T 4g3b_A 4 DEXYKELEDXQERLRKXRKKLR 25 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhc
Confidence 4678999999999999998875
No 395
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=65.08 E-value=11 Score=37.86 Aligned_cols=81 Identities=12% Similarity=0.081 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHH-HHHHHHhcceEEcCCC---ceecc-cCCcC
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQ-VEKLIKEHSVYLTKDG---RISMA-GVTSK 115 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~q-v~~L~~~~~IY~~~~G---Rinva-gl~~~ 115 (420)
.+.+++..+++.|.+.|+++.. ...-.-.+..|+|...-+ +..+ ++.|. +.+|++.+.| ||+.+ ..+..
T Consensus 360 ~~~~~~~~~~~~l~~~L~~l~~-~~~v~~vr~~G~~~~i~l~~~~~~~~~~~~l~-~~Gv~v~~~~~~lRi~p~~~~t~e 437 (457)
T 3tfu_A 360 DWRTRITELAAGLTAGLDTARA-LPAVTDVRVCGAIGVIECDRPVDLAVATPAAL-DRGVWLRPFRNLVYAMPPYICTPA 437 (457)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGG-STTEEEEEECSSCEEEEESSCCCHHHHHHHHH-HTTEECCCBTTEEEECCCTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCeeeeecCCeEEEEEECCcccHHHHHHHHH-HCCeEEEecCCEEEEECCCCCCHH
Confidence 3455666677777777776531 111112345677765533 2344 45565 4599987655 44433 56889
Q ss_pred CHHHHHHHHHhh
Q psy16707 116 NVGYLAKAIHAN 127 (420)
Q Consensus 116 ni~~va~ai~~v 127 (420)
+++.++++|.++
T Consensus 438 ei~~~l~~L~~~ 449 (457)
T 3tfu_A 438 EITQITSAMVEV 449 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988776
No 396
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=64.28 E-value=15 Score=37.07 Aligned_cols=81 Identities=11% Similarity=0.115 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----------------CHHHHHHHHHhcceEEcCC-Cce
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----------------NATQVEKLIKEHSVYLTKD-GRI 107 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----------------~~~qv~~L~~~~~IY~~~~-GRi 107 (420)
.+.+++..+++.|.+.|++++. ...-...+..|+|...-+ ..+-++.|. +++|++.+. ++|
T Consensus 350 ~~~~~~~~~~~~l~~~L~~l~~-~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~i 427 (476)
T 3i5t_A 350 GIVDQAREMADYFAAALASLRD-LPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCF-ELGLIVRPLGDLC 427 (476)
T ss_dssp THHHHHHHHHHHHHHHHHTTTT-STTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHH-HTTEECEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHH-HCCCEEEecCCEE
Confidence 4566666777777777775542 111222345666533221 223345565 458988765 455
Q ss_pred ecc---cCCcCCHHHHHHHHHhh
Q psy16707 108 SMA---GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 108 nva---gl~~~ni~~va~ai~~v 127 (420)
-|+ ..+..+++.+.++|.++
T Consensus 428 Ri~p~l~~t~e~i~~~l~~l~~~ 450 (476)
T 3i5t_A 428 VISPPLIISRAQIDEMVAIMRQA 450 (476)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHH
Confidence 554 78889999999998876
No 397
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=63.16 E-value=3.9 Score=40.32 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------------CHHHHHHHHHhcceEEcCCC------c
Q psy16707 46 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------------NATQVEKLIKEHSVYLTKDG------R 106 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------------~~~qv~~L~~~~~IY~~~~G------R 106 (420)
+.++++.+++.+.+.|++.......-......|.|...-+ ..+-++.|.+ ++|++.+.| |
T Consensus 321 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~iR 399 (439)
T 3dxv_A 321 LPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQ-LGLVVYYVGMNGNVLE 399 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHH-HTEECEEESTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHH-CCcEEeecCCCCCEEE
Confidence 4445555555555555443211111122334565544433 2233455654 588886543 4
Q ss_pred eecc-cCCcCCHHHHHHHHHhh
Q psy16707 107 ISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 107 inva-gl~~~ni~~va~ai~~v 127 (420)
|+++ ..+..+++.+.++|.++
T Consensus 400 i~~~~~~t~e~i~~~l~~l~~~ 421 (439)
T 3dxv_A 400 FTPPLTITETDIHKALDLLDRA 421 (439)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 4444 45778999999988876
No 398
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=62.37 E-value=5.5 Score=39.24 Aligned_cols=82 Identities=4% Similarity=0.049 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----------------HH-HHHHHHHhcceEEcCCC-
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----------------AT-QVEKLIKEHSVYLTKDG- 105 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-----------------~~-qv~~L~~~~~IY~~~~G- 105 (420)
.+.++++.+++.|.+.|++......+.......|+|...-+. .+ =++.|+ +++|++.+.|
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~ 403 (434)
T 2epj_A 325 PVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSNL 403 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccCC
Confidence 345566666666666665431000121113445655443322 12 334565 5799998655
Q ss_pred -ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 106 -RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 -Rinva-gl~~~ni~~va~ai~~v 127 (420)
|+.++ ..+..+++.+.++|.++
T Consensus 404 ~~~~~~~~~t~e~i~~~l~~l~~~ 427 (434)
T 2epj_A 404 EAVFTGLPHQGEALEIAVEGLRSS 427 (434)
T ss_dssp SCEECCTTCSHHHHHHHHHHHHHH
T ss_pred CcEEEeccCCHHHHHHHHHHHHHH
Confidence 45443 45678889888888765
No 399
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=62.20 E-value=18 Score=35.84 Aligned_cols=80 Identities=15% Similarity=0.224 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCCCCCccccccccceeecCCC-----H-HHHHHHHHhcceEEcC--CCc--eecc-c
Q psy16707 45 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN-----A-TQVEKLIKEHSVYLTK--DGR--ISMA-G 111 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~--~~~~~w~~i~~Q~GmFs~~gL~-----~-~qv~~L~~~~~IY~~~--~GR--inva-g 111 (420)
.+.++++.+++.|.+.|++. +-+. -......|+|...-+. . +-++.|. +++|++.+ .+. |+++ .
T Consensus 333 ~~~~~~~~~~~~l~~~L~~l~~~~~~--~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~iRi~~~~~ 409 (433)
T 1z7d_A 333 KLCENAEKLGGPFLENLKRELKDSKI--VRDVRGKGLLCAIEFKNELVNVLDICLKLK-ENGLITRDVHDKTIRLTPPLC 409 (433)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEETTEEEEEECTTTCCHHHHHHHHH-HTTEECCEETTTEEEECCCTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEeeeeEEEEEEccChhHHHHHHHHHH-HCCeEEecCCCCEEEEECCcC
Confidence 35667777777777777765 3221 1112345665444332 3 3445665 46999876 444 4444 4
Q ss_pred CCcCCHHHHHHHHHhh
Q psy16707 112 VTSKNVGYLAKAIHAN 127 (420)
Q Consensus 112 l~~~ni~~va~ai~~v 127 (420)
.+..+|+.++++|.++
T Consensus 410 ~t~e~i~~~l~~l~~~ 425 (433)
T 1z7d_A 410 ITKEQLDECTEIIVKT 425 (433)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 6889999999998876
No 400
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=62.09 E-value=5.7 Score=38.64 Aligned_cols=81 Identities=9% Similarity=-0.030 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC----Cce--EE-ecC-----------------------CCHHHHHH
Q psy16707 334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGM--FC-YTG-----------------------LNATQVEK 383 (420)
Q Consensus 334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q----~Gm--F~-~~~-----------------------l~~~~v~~ 383 (420)
++.+.+++++.++.+.+.|++. . ...... .++ +. .++ .+.+.+..
T Consensus 245 l~~~~~~~~~~~~~l~~~L~~~-~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 319 (394)
T 1o69_A 245 LEQRVLKKREIYEWYKEFLGEY-F----SFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIE 319 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-E----ECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccc-c----cccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHH
Confidence 3345578888888898888764 2 212221 232 22 123 13444544
Q ss_pred HHHhCCeEEeCCC-----------------------------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 384 LIKEHSVYLTKDG-----------------------------RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 384 Ll~e~~Vy~~p~g-----------------------------Ris~agl~~~ni~~la~AI~~vv 419 (420)
.+.++||++.++. |.+....+.+++++++++|.+++
T Consensus 320 ~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~ 384 (394)
T 1o69_A 320 DLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSI 384 (394)
T ss_dssp HHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 4467899997761 11112267889999999999875
No 401
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=61.96 E-value=6.3 Score=38.71 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=27.4
Q ss_pred HHHHHHHHhcceEEcCCC--ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 88 TQVEKLIKEHSVYLTKDG--RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv~~L~~~~~IY~~~~G--Rinva-gl~~~ni~~va~ai~~v 127 (420)
+-++.|. +++|++.+.| |+.+. ..+...++.++++|.++
T Consensus 384 ~~~~~l~-~~Gi~v~~~~~~~~~~~~~~t~e~i~~~l~~l~~~ 425 (429)
T 4e77_A 384 RFFHLML-EEGVYLAPSAFEAGFMSLAHSNEDIQKTVNAARRC 425 (429)
T ss_dssp HHHHHHH-HTTEECCSSTTSCEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HCCeEEeecCCCCEEEeccCCHHHHHHHHHHHHHH
Confidence 3445565 4599988765 55543 45778899999998876
No 402
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=61.45 E-value=6.5 Score=38.78 Aligned_cols=80 Identities=14% Similarity=0.135 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCCCccccccccceeecCC------CHHH-HHHHHHhcceEEcCC--C--ceecc-
Q psy16707 45 GMADRIISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGL------NATQ-VEKLIKEHSVYLTKD--G--RISMA- 110 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~--~~~~w~~i~~Q~GmFs~~gL------~~~q-v~~L~~~~~IY~~~~--G--Rinva- 110 (420)
.+.++++.+|+.|.+.|++.. .+. ... ....|+|...-+ +.++ ++.|.+ ++|++.+. + ||+++
T Consensus 321 ~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~-~~~~g~~~~v~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~~~~iRl~~~~ 397 (420)
T 2pb2_A 321 EVLQGIHTKRQQFVQHLQAIDEQFDI-FSD-IRGMGLLIGAELKPKYKGRARDFLYAGAE-AGVMVLNAGADVMRFAPSL 397 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC-EEE-EEEETTEEEEEECGGGTTCHHHHHHHHHH-TTEECEESSTTEEEECCCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCC-eEE-EEecceEEEEEECCCchHHHHHHHHHHHH-CCCEEEeCCCCEEEEECCC
Confidence 345566666777777776541 111 111 233455544333 2333 455654 79988764 3 34443
Q ss_pred cCCcCCHHHHHHHHHhh
Q psy16707 111 GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 111 gl~~~ni~~va~ai~~v 127 (420)
..+..+++.++++|.++
T Consensus 398 ~~t~eei~~~~~~l~~~ 414 (420)
T 2pb2_A 398 VVEEADIHEGMQRFAQA 414 (420)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 67889999999998775
No 403
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=61.05 E-value=8.1 Score=37.88 Aligned_cols=38 Identities=8% Similarity=0.047 Sum_probs=26.6
Q ss_pred HHHHHHHhcceEEcCC---------C--ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 89 QVEKLIKEHSVYLTKD---------G--RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 qv~~L~~~~~IY~~~~---------G--Rinva-gl~~~ni~~va~ai~~v 127 (420)
-.+.|. +++|.+.+. + ||+++ ..+..+++.++++|.++
T Consensus 375 ~~~~l~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 424 (430)
T 3i4j_A 375 IGAAAL-KRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGA 424 (430)
T ss_dssp HHHHHH-HTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHH-hCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 345565 678988754 2 77777 57789999999988775
No 404
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=60.21 E-value=56 Score=33.09 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=27.2
Q ss_pred HHHHHHhCCeEEeCCC------cEEEc-ccCCCCHHHHHHHHHHHhC
Q psy16707 381 VEKLIKEHSVYLTKDG------RISMA-GVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 381 v~~Ll~e~~Vy~~p~g------Ris~a-gl~~~ni~~la~AI~~vv~ 420 (420)
++.+ .+.||++.+.| ||.-. .++++.|+.+.+++.++++
T Consensus 408 ~~~~-~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~ 453 (456)
T 4atq_A 408 AAAC-LKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIK 453 (456)
T ss_dssp HHHH-HHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 3444 57899987644 44321 2688899999999988864
No 405
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=59.88 E-value=23 Score=33.46 Aligned_cols=84 Identities=6% Similarity=0.102 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc----ccc--ceeecCCCHHHHHHHHHhcceEEcCCC----------
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIG--MFCYTGLNATQVEKLIKEHSVYLTKDG---------- 105 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~----Q~G--mFs~~gL~~~qv~~L~~~~~IY~~~~G---------- 105 (420)
.++.+.+|...+++.|.+.|++.+. .+..... ..+ .|....-+.+++...-.+++|++....
T Consensus 246 ~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~ 323 (374)
T 3uwc_A 246 QLETITEKRRGIAHLYDQSFVDLSE--FIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAMHLQPAA 323 (374)
T ss_dssp GHHHHHHHHHHHHHHHHHHTGGGTT--TEECCCCCTTEECCCSSEEEEETTHHHHHHHHHHTTBCCBCSCSSCGGGSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCC--eEEeccCCCCCceeeEEEEEEcCCHHHHHHHHHHCCCccccCCCCccccChhh
Confidence 3556677778888888888876542 0222111 111 222333355555443355688876543
Q ss_pred ---------------------ceec-ccCCcCCHHHHHHHHHhh
Q psy16707 106 ---------------------RISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 ---------------------Rinv-agl~~~ni~~va~ai~~v 127 (420)
||++ ..++.++|++++++|.++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 367 (374)
T 3uwc_A 324 KSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREF 367 (374)
T ss_dssp GGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred hhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 2222 235678888888888776
No 406
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=59.74 E-value=7.6 Score=38.02 Aligned_cols=79 Identities=13% Similarity=0.121 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHhcC--CCCCCccccccccceeecCC-------------CHHHHHHHHHhcceEEcCC------
Q psy16707 46 MADRIISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGL-------------NATQVEKLIKEHSVYLTKD------ 104 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~--~~~~w~~i~~Q~GmFs~~gL-------------~~~qv~~L~~~~~IY~~~~------ 104 (420)
+.++++.+|+.|.+.|++.. .+. +.. ....|+|...-+ ..+-++.|. +++|++.+.
T Consensus 326 ~~~~~~~~~~~l~~~l~~l~~~~~~-~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~ 402 (433)
T 1zod_A 326 LVARANVMGDRLRRGLLDLMERFDC-IGD-VRGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMG 402 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTT-EEE-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-eEE-EEEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCC
Confidence 34566666666666665542 121 112 334566654322 223345565 679988653
Q ss_pred C--ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 105 G--RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 105 G--Rinva-gl~~~ni~~va~ai~~v 127 (420)
+ ||+++ ..+..+++.+.++|.++
T Consensus 403 ~~lRi~~~~~~t~~~i~~~l~~l~~~ 428 (433)
T 1zod_A 403 GVFRIAPPLTVSEDEIDLGLSLLGQA 428 (433)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CEEEEECCcCCCHHHHHHHHHHHHHH
Confidence 3 34434 57788999999988765
No 407
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=58.34 E-value=21 Score=35.52 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----------------HHHHHHHHHhcceEEcCCC-
Q psy16707 43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------------ATQVEKLIKEHSVYLTKDG- 105 (420)
Q Consensus 43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----------------~~qv~~L~~~~~IY~~~~G- 105 (420)
++.++++...+|+.|.+.|.+... .. ..+..|+|.-.-+. .+-.+.|. +++|++.+.|
T Consensus 351 ~~~~~~~~~~~~~~l~~~l~~~~~---~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~ 425 (460)
T 3gju_A 351 VTNAGETGAYFRAELAKAVGGHKN---VG-EVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALA-ASGVIGRAMPQ 425 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTT---EE-EEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---eE-EEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHH-HCCeEEecCCC
Confidence 344555555666666666654321 11 23345555333221 23345554 5589887654
Q ss_pred --ceecc---cCCcCCHHHHHHHHHhh
Q psy16707 106 --RISMA---GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 --Rinva---gl~~~ni~~va~ai~~v 127 (420)
+|-|+ ..+..+++.+.++|.++
T Consensus 426 ~~~iRi~~~~~~t~e~i~~~l~~l~~~ 452 (460)
T 3gju_A 426 GDILGFAPPLCLTREQADIVVSKTADA 452 (460)
T ss_dssp SCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 44444 67889999999988776
No 408
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=58.21 E-value=15 Score=36.30 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=26.8
Q ss_pred HHHHHHHHhcceEEcCC-Cceec--c-cCCcCCHHHHHHHHHhh
Q psy16707 88 TQVEKLIKEHSVYLTKD-GRISM--A-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 88 ~qv~~L~~~~~IY~~~~-GRinv--a-gl~~~ni~~va~ai~~v 127 (420)
+-++.|. +.+|++.+. ++|-+ + ..+..+|+.+.++|.++
T Consensus 397 ~~~~~l~-~~Gv~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 439 (448)
T 3dod_A 397 KVSLKMR-ELGMLTRPLGDVIAFLPPLASTAEELSEMVAIMKQA 439 (448)
T ss_dssp HHHHHHH-HTTEECCEETTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HCCcEEeccCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4456665 458988764 44444 3 66778999999888775
No 409
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=57.47 E-value=4.2 Score=38.21 Aligned_cols=26 Identities=12% Similarity=0.088 Sum_probs=20.8
Q ss_pred cccceeecCCCHHHHHHHHHhcceEE
Q psy16707 76 QIGMFCYTGLNATQVEKLIKEHSVYL 101 (420)
Q Consensus 76 Q~GmFs~~gL~~~qv~~L~~~~~IY~ 101 (420)
+.|||++.--+++++..+-++++|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~gI~~ 269 (331)
T 1pff_A 244 FGSMIAFDVDGLEKAKKVLDNCHVVS 269 (331)
T ss_dssp CCSEEEEECSSHHHHHHHHHTCSSSE
T ss_pred CceEEEEEECCHHHHHHHHHhCCCce
Confidence 56788887558888888888999976
No 410
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=56.42 E-value=54 Score=33.17 Aligned_cols=84 Identities=10% Similarity=0.134 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccceeec--C---CCH-HHHHHHHHhcceEE----cCCC--
Q psy16707 40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--G---LNA-TQVEKLIKEHSVYL----TKDG-- 105 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~--Q~GmFs~~--g---L~~-~qv~~L~~~~~IY~----~~~G-- 105 (420)
.+.+..+.+|...+++.|.+.|++.+ .|..+.. +.++++|. + ++. +-.++|+ +.+|++ .+.+
T Consensus 337 ~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~p~~~~ 412 (502)
T 3hbx_A 337 HEGYRNVMENCRENMIVLREGLEKTE---RFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLR-RYGWIVPAYTMPPNAQ 412 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTT---CEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHH-TTTCBCCEEECCTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC---CEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHH-hCCcEEeeccCCcccC
Confidence 45677888889999999999998764 2444443 56676663 2 666 4455664 557653 3322
Q ss_pred -----ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 106 -----RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 -----Rinva-gl~~~ni~~va~ai~~v 127 (420)
||++. ..+..+++.+.++|.++
T Consensus 413 ~~~~lRisv~~~~t~edid~li~~L~~~ 440 (502)
T 3hbx_A 413 HITVLRVVIREDFSRTLAERLVIDIEKV 440 (502)
T ss_dssp TCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 77765 34568899999888776
No 411
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=55.99 E-value=16 Score=36.09 Aligned_cols=38 Identities=11% Similarity=0.350 Sum_probs=26.8
Q ss_pred HHHHHHHhcceEEcCCC--------ceec---ccCCcCCHHHHHHHHHhh
Q psy16707 89 QVEKLIKEHSVYLTKDG--------RISM---AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 qv~~L~~~~~IY~~~~G--------Rinv---agl~~~ni~~va~ai~~v 127 (420)
-++.|. +.+|++.+.| +|-| ...+..+|+.++++|.++
T Consensus 400 ~~~~l~-~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 448 (452)
T 3n5m_A 400 VVNACK-EKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTA 448 (452)
T ss_dssp HHHHHH-HTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHH-HCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 445554 5689887654 4544 456779999999999876
No 412
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=55.72 E-value=13 Score=36.65 Aligned_cols=37 Identities=19% Similarity=0.158 Sum_probs=25.9
Q ss_pred HHHHHHhcceEEcCCCceec-ccCCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKDGRISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~GRinv-agl~~~ni~~va~ai~~v 127 (420)
++.|. +++|++.+.||+.+ ...+..+++.+.++|.++
T Consensus 394 ~~~l~-~~Gv~v~~~~~~~l~~~~t~~~i~~~l~~l~~~ 431 (453)
T 2cy8_A 394 RMALI-LEGVDIGGRGSVFLSAQHEREHVEHLVTTFDRV 431 (453)
T ss_dssp HHHHH-HTTEECBTTTEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCeEEeCCCCEEeeccCCHHHHHHHHHHHHHH
Confidence 45565 56999977666544 345668888888888765
No 413
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=55.32 E-value=38 Score=33.86 Aligned_cols=82 Identities=20% Similarity=0.225 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccc--eee---cCCCHHHH-HHHHHhcceEEcC-------CC--
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM--FCY---TGLNATQV-EKLIKEHSVYLTK-------DG-- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~Gm--Fs~---~gL~~~qv-~~L~~~~~IY~~~-------~G-- 105 (420)
+.++++.+++..+|..|.+.|++.+ +..+.....+ |.+ .|.+.+++ ++|. +++|++.. .+
T Consensus 340 ~~l~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~Gi~~~~~~~~~~~~~~l 414 (474)
T 1wyu_B 340 EGLKKAAALAVLNARYLKELLKEKG----YRVPYDGPSMHEFVAQPPEGFRALDLAKGLL-ELGFHPPTVYFPLIVKEAL 414 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----CBCSSCSSCCSCEEEBCSTTCCHHHHHHHHH-HTTCCCCEESCSTTSTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC----cEecCCCCcceEEEEEcCCCCCHHHHHHHHH-HCCccccccccccccCCEE
Confidence 4577788899999999999998753 2221211111 222 25566655 4565 44887531 23
Q ss_pred ceecccC-CcCCHHHHHHHHHhh
Q psy16707 106 RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 Rinvagl-~~~ni~~va~ai~~v 127 (420)
||+++.. +..+++.++++|.++
T Consensus 415 Ris~~~~~t~e~id~~~~~L~~~ 437 (474)
T 1wyu_B 415 MVEPTETEAKETLEAFAEAMGAL 437 (474)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHH
T ss_pred EEEeecCCCHHHHHHHHHHHHHH
Confidence 7777654 467899999999887
No 414
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=55.30 E-value=19 Score=33.70 Aligned_cols=72 Identities=18% Similarity=0.129 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHH-HHHHHhcceEEcC--CC--ceec-ccCCcCCHHHH
Q psy16707 52 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQV-EKLIKEHSVYLTK--DG--RISM-AGVTSKNVGYL 120 (420)
Q Consensus 52 ~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~qv-~~L~~~~~IY~~~--~G--Rinv-agl~~~ni~~v 120 (420)
..|+.|.+.|++.+. .+. .....|.|.+. +.+.+++ ++|. +++|.+.. .+ ||++ .++++.+++++
T Consensus 260 ~~~~~l~~~L~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~iRl~~~~~~~~e~i~~~ 335 (347)
T 1jg8_A 260 ENARFLALKLKEIGY--SVN-PEDVKTNMVILRTDNLKVNAHGFIEALR-NSGVLANAVSDTEIRLVTHKDVSRNDIEEA 335 (347)
T ss_dssp HHHHHHHHHHHHHTC--BCC-GGGCCSSEEEEECTTSSSCHHHHHHHHH-HHTEECEEEETTEEEEECCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCc--eec-cCCCcceEEEEEcccccCCHHHHHHHHH-HCCCEEecCCCCeEEEEeCCCCCHHHHHHH
Confidence 356666777766532 121 12233433332 3445554 5675 67888764 34 6666 56789999999
Q ss_pred HHHHHhh
Q psy16707 121 AKAIHAN 127 (420)
Q Consensus 121 a~ai~~v 127 (420)
+++|.++
T Consensus 336 ~~~l~~~ 342 (347)
T 1jg8_A 336 LNIFEKL 342 (347)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 415
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=53.84 E-value=44 Score=32.70 Aligned_cols=78 Identities=18% Similarity=0.200 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCcccCCC-----Cc--eEEe-c----CCCHHHHHHHHHhCCeEEeCCC---------
Q psy16707 339 DRIISMRQSLKDNLQKE-GSNKPWNHITDQ-----IG--MFCY-T----GLNATQVEKLIKEHSVYLTKDG--------- 396 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q-----~G--mF~~-~----~l~~~~v~~Ll~e~~Vy~~p~g--------- 396 (420)
++.++.++.+.+.|+++ | +..++.. .+ .|.+ + +.+.+.+...+.+.||++.++.
T Consensus 311 ~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~ 386 (437)
T 3bb8_A 311 EKRKANFKYLKDALQSCAD----FIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPY 386 (437)
T ss_dssp HHHHHHHHHHHHHGGGGTT----TEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGG
T ss_pred HHHHHHHHHHHHHhhccCC----ccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCch
Confidence 34466667788888776 4 2222211 12 3443 2 3566666444467899886431
Q ss_pred -----------------------cEEEc-ccCCCCHHHHHHHHHHHhC
Q psy16707 397 -----------------------RISMA-GVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 397 -----------------------Ris~a-gl~~~ni~~la~AI~~vv~ 420 (420)
||++. .++.++|++++++|.++++
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 387 FHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp GSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred hhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 22221 2477889999999998763
No 416
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=52.38 E-value=33 Score=34.51 Aligned_cols=85 Identities=8% Similarity=0.260 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc---ccccceeecCCC--------------------HHHHHHHHHhc
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT---DQIGMFCYTGLN--------------------ATQVEKLIKEH 97 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~---~Q~GmFs~~gL~--------------------~~qv~~L~~~~ 97 (420)
+.++++.+++..+++.|.+.|++. + .|..+. .+.++|+|.... .+-.++|.++.
T Consensus 382 ~g~~~~~~~~~~~a~~l~~~L~~~--~-~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 458 (504)
T 2okj_A 382 VGFENQINKCLELAEYLYAKIKNR--E-EFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESG 458 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC--T-TEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--C-CEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCC
Confidence 457778889999999999999764 2 255443 577888875321 23446677666
Q ss_pred ceEEc---CCC-----ceeccc--CCcCCHHHHHHHHHhhC
Q psy16707 98 SVYLT---KDG-----RISMAG--VTSKNVGYLAKAIHANG 128 (420)
Q Consensus 98 ~IY~~---~~G-----Rinvag--l~~~ni~~va~ai~~v~ 128 (420)
.+++. ..| ||++.. .+..+|+.+.++|.+++
T Consensus 459 ~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~ 499 (504)
T 2okj_A 459 TTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLG 499 (504)
T ss_dssp SCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHH
T ss_pred cEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 56553 123 566642 45678999999998774
No 417
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=52.20 E-value=18 Score=34.47 Aligned_cols=58 Identities=5% Similarity=0.034 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc----ccc--ceeecCCCHHHHHHHHHhcceEEc
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIG--MFCYTGLNATQVEKLIKEHSVYLT 102 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~----Q~G--mFs~~gL~~~qv~~L~~~~~IY~~ 102 (420)
+.++.+.+|.+.+++.+.+.|++.+ +..... ..+ .|...+-+.+++...-++.+|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 307 (373)
T 3frk_A 244 KYLDKWNEERRKIAQKYIAGINNPN----VIIPVEADYAKHVWYTFVIRSEKRDELQKYLNNNGIGTL 307 (373)
T ss_dssp HTHHHHHHHHHHHHHHHHHHCCCTT----EECCCCCTTEECCCSSEEEEESSHHHHHHHHHHTTBCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCc----eEeccCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCCcc
Confidence 4456667777788888888876543 211111 111 233334455555444355699876
No 418
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=51.21 E-value=29 Score=33.08 Aligned_cols=58 Identities=9% Similarity=-0.054 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc------ccccceeecCCC------HH-HHHHHHHhcceEEc
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT------DQIGMFCYTGLN------AT-QVEKLIKEHSVYLT 102 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~------~Q~GmFs~~gL~------~~-qv~~L~~~~~IY~~ 102 (420)
+.++.+.++++..|+.|.+.|++. ++ +..+. .+.|+|...-+. .+ -++.|. +++|++.
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~ 320 (388)
T 1b9h_A 250 ARLDEQIAVRDERWTLLSRLLGAI--DG-VVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLV-EAGLPAF 320 (388)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTS--TT-CEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHH-HTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC--CC-ccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHH-HCCCCcc
Confidence 345557778888899999999865 22 33332 234555444332 23 345665 5688884
No 419
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=50.64 E-value=9 Score=37.60 Aligned_cols=37 Identities=14% Similarity=0.240 Sum_probs=25.2
Q ss_pred HHHHHHhcceEEcCCC--ceec-ccCCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKDG--RISM-AGVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~G--Rinv-agl~~~ni~~va~ai~~v 127 (420)
.+.|. +++|++.+.| ++.+ ...+..+++.+.++|.++
T Consensus 387 ~~~l~-~~Gv~v~~~~~~~~rl~~~~t~e~i~~~l~~l~~~ 426 (434)
T 3l44_A 387 FKLML-QEGVNLAPSKYEAWFLTTEHTKEDIEYTIEAVGRA 426 (434)
T ss_dssp HHHHH-HTTEECCSSTTCCEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCeEEeecCCCcEEEecccCHHHHHHHHHHHHHH
Confidence 44554 5699987654 3333 356778999999988776
No 420
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=50.62 E-value=22 Score=35.86 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=28.0
Q ss_pred HHHHHHhcceEEcCC-Cceecc---cCCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKD-GRISMA---GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~-GRinva---gl~~~ni~~va~ai~~v 127 (420)
++.|. +++|++.+. ++|-|+ ..+..+++.++++|.++
T Consensus 408 ~~~l~-~~Gv~v~~~g~~iRi~p~~~~t~e~i~~~l~~l~~~ 448 (472)
T 3hmu_A 408 RERCF-ANNLIMRHVGDRMIISPPLVITPAEIDEMFVRIRKS 448 (472)
T ss_dssp HHHHH-HTTBCCEEETTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 45565 558887653 566676 88999999999998876
No 421
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=50.28 E-value=81 Score=30.96 Aligned_cols=84 Identities=17% Similarity=0.218 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-----ccccceeec--C-----CC-HHHHHHHHHhcce----EEc
Q psy16707 40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-----DQIGMFCYT--G-----LN-ATQVEKLIKEHSV----YLT 102 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-----~Q~GmFs~~--g-----L~-~~qv~~L~~~~~I----Y~~ 102 (420)
.+.++.+.+++..+|+.|.+.|++.+ .|..+. .+.++++|. + ++ .+-+++|++ .+| |..
T Consensus 322 ~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~ 397 (452)
T 2dgk_A 322 REGYTKVQNASYQVAAYLADEIAKLG---PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRL-RGWQVPAFTL 397 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTS---SEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHH-TTCBCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC---CeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHh-cCCeeeeeeC
Confidence 35578889999999999999998753 254443 245666653 2 45 455667765 466 443
Q ss_pred CC---C----ceecccC-CcCCHHHHHHHHHhh
Q psy16707 103 KD---G----RISMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 103 ~~---G----Rinvagl-~~~ni~~va~ai~~v 127 (420)
+. | ||++..- +...+|+++++|.++
T Consensus 398 ~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~ 430 (452)
T 2dgk_A 398 GGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS 430 (452)
T ss_dssp STTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CcccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 32 2 5666543 447899999988775
No 422
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=49.85 E-value=19 Score=35.41 Aligned_cols=79 Identities=8% Similarity=0.144 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccc--cccccceeecCCC---------H-HHHHHHHHhcceEEcCC-Cceecc-
Q psy16707 45 GMADRIISMRQSLKDNLQKEGSNKPWNHI--TDQIGMFCYTGLN---------A-TQVEKLIKEHSVYLTKD-GRISMA- 110 (420)
Q Consensus 45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i--~~Q~GmFs~~gL~---------~-~qv~~L~~~~~IY~~~~-GRinva- 110 (420)
.+.++++.++..|.+.|++++. +..+ ....|+|...-+. + +=++.|. +++|++.+. +.|-|+
T Consensus 349 ~~~~~~~~~~~~l~~~L~~l~~---~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~iRis~ 424 (449)
T 3a8u_X 349 NLVQSVAEVAPHFEKALHGIKG---AKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFGGDTLQFGP 424 (449)
T ss_dssp THHHHHHHHHHHHHHHHHTTTT---STTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEETTEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHhc---CCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecCCCEEEEEC
Confidence 4567778888888888876431 2222 2455666554332 1 3455676 459988753 444444
Q ss_pred --cCCcCCHHHHHHHHHhh
Q psy16707 111 --GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 111 --gl~~~ni~~va~ai~~v 127 (420)
..+..+++.++++|.++
T Consensus 425 ~~~~t~~~i~~~l~~l~~~ 443 (449)
T 3a8u_X 425 TFNSKPQDLDRLFDAVGEV 443 (449)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHH
Confidence 78889999999998875
No 423
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=49.71 E-value=49 Score=32.24 Aligned_cols=25 Identities=16% Similarity=0.163 Sum_probs=17.4
Q ss_pred ccceeecCCC--HHHHHHHHHhcceEEc
Q psy16707 77 IGMFCYTGLN--ATQVEKLIKEHSVYLT 102 (420)
Q Consensus 77 ~GmFs~~gL~--~~qv~~L~~~~~IY~~ 102 (420)
-|||++ .+. .+++..+-++.+|+..
T Consensus 309 g~~~~~-~~~~~~~~~~~~l~~~~i~~~ 335 (404)
T 1e5e_A 309 GSMITF-ILKSGFEGAKKLLDNLKLITL 335 (404)
T ss_dssp CSEEEE-EETTHHHHHHHHHHTCSSSEE
T ss_pred ceEEEE-EeCCCHHHHHHHHHhCCCcee
Confidence 778887 554 3567777788887543
No 424
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=49.45 E-value=40 Score=33.14 Aligned_cols=81 Identities=11% Similarity=0.101 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccce---ee-cCCCHHH-HHHHHHhcceEE--cC-----CC--ce
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF---CY-TGLNATQ-VEKLIKEHSVYL--TK-----DG--RI 107 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmF---s~-~gL~~~q-v~~L~~~~~IY~--~~-----~G--Ri 107 (420)
.++.+.+|+...|..|.+.|++.. | +..+..+ ..| .+ .+.+.++ +++|.+ ++|++ .. .+ ||
T Consensus 341 g~~~~~~~~~~~~~~l~~~L~~~~--g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~-~gi~v~~~~~~~~~~~~lRi 415 (438)
T 1wyu_A 341 GLREVALKSVEMAHKLHALLLEVP--G-VRPFTPK-PFFNEFALALPKDPEAVRRALAE-RGFHGATPVPREYGENLALF 415 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTST--T-CEECSCS-SBCSEEEEECSSCHHHHHHHHHH-TTCCCCEECCTTSCSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC--C-eEECCCC-CeEEEEEEeCCCCHHHHHHHHHH-CCceeccccccccCCCeEEE
Confidence 478899999999999999998751 1 3322221 222 23 2345444 456654 58887 21 34 55
Q ss_pred ecccC-CcCCHHHHHHHHHhh
Q psy16707 108 SMAGV-TSKNVGYLAKAIHAN 127 (420)
Q Consensus 108 nvagl-~~~ni~~va~ai~~v 127 (420)
++... +..+++.++++|.++
T Consensus 416 s~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 416 AATELHEEEDLLALREALKEV 436 (438)
T ss_dssp ECCTTCCHHHHHHHHHHHHHH
T ss_pred EecccCCHHHHHHHHHHHHHH
Confidence 65543 557899999998765
No 425
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=49.10 E-value=37 Score=33.89 Aligned_cols=84 Identities=14% Similarity=0.329 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeec--C---CCHHHHHHHHHhcceEEcC---CC----ce
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT--G---LNATQVEKLIKEHSVYLTK---DG----RI 107 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~--g---L~~~qv~~L~~~~~IY~~~---~G----Ri 107 (420)
+.++++.+++..+++.|.+.|++.. .|.-+. .+-++++|. + ++.+-.++|.++..+|+.. .| |+
T Consensus 372 ~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi 448 (486)
T 1js3_A 372 KGLQAYIRKHVQLSHEFEAFVLQDP---RFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRF 448 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCT---TEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEE
Confidence 4477788889999999999998741 244332 355677664 3 2455566777665555432 22 57
Q ss_pred ecccC--CcCCHHHHHHHHHhh
Q psy16707 108 SMAGV--TSKNVGYLAKAIHAN 127 (420)
Q Consensus 108 nvagl--~~~ni~~va~ai~~v 127 (420)
++++. +..+|++++++|.++
T Consensus 449 ~~~~~~~t~~di~~~~~~l~~~ 470 (486)
T 1js3_A 449 AICSRKVESGHVRLAWEHIRGL 470 (486)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHH
Confidence 76553 456899999998776
No 426
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=48.47 E-value=55 Score=30.99 Aligned_cols=61 Identities=11% Similarity=-0.025 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cc--cceeecCCCHHHHHHHHHhcceEEcCC
Q psy16707 42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QI--GMFCYTGLNATQVEKLIKEHSVYLTKD 104 (420)
Q Consensus 42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~--Q~--GmFs~~gL~~~qv~~L~~~~~IY~~~~ 104 (420)
.++.+.+|.+.+++.+.+.|++.+.. ...... .. -+|....-+.+++...-++.+|++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~~~~~ 308 (367)
T 3nyt_A 244 IFEEEIALRQKVAAEYDLSLKQVGIG--TPFIEVNNISVYAQYTVRMDNRESVQASLKAAGVPTAVH 308 (367)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCTTEECCCSSEEEECSSHHHHHHHHHHHTCCCBCS
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCee--ccCCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCceecc
Confidence 44556677777888888888876321 111100 01 123333335555544445668876543
No 427
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=48.24 E-value=61 Score=32.16 Aligned_cols=85 Identities=8% Similarity=0.023 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCccccccccceeec----CCCHHHHHHHHHhc--ceEEc-----------
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYT----GLNATQVEKLIKEH--SVYLT----------- 102 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~-~~~~w~~i~~Q~GmFs~~----gL~~~qv~~L~~~~--~IY~~----------- 102 (420)
+.++++.+++..+|+.|.+.|++.. .+| +..+..+ +.++|. +...+-.++|.++. .+-+.
T Consensus 346 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~v~~~~-~~v~~~~~~~~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~ 423 (456)
T 2z67_A 346 KNYLELVKNQKNSKKLLDELLNDLSKKTG-GKFLDVE-SPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYL 423 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CCBCCCC-CSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccC-CEecCCC-CeEEEEEecccHHHHHHHHHHHcCCCcceEEeecCccccccc
Confidence 3467788999999999999998761 001 2222233 555542 22134455676552 11222
Q ss_pred ---CCC--ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 103 ---KDG--RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 103 ---~~G--Rinva-gl~~~ni~~va~ai~~v 127 (420)
..| |++++ +.+...||+++++|.++
T Consensus 424 ~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 424 GTYTHDYIVMNAAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp SCCSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred cccCcchhhhhhhcCCCHHHHHHHHHHHHHH
Confidence 122 22333 67888999999998764
No 428
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=46.90 E-value=20 Score=35.66 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=24.9
Q ss_pred HHHHHhcceEEcCCC------ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 91 EKLIKEHSVYLTKDG------RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 91 ~~L~~~~~IY~~~~G------Rinva-gl~~~ni~~va~ai~~v 127 (420)
+.| .+++|++.+.| ||+++ ..+..+++...++|.++
T Consensus 403 ~~l-~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 445 (453)
T 4ffc_A 403 AEA-LSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDI 445 (453)
T ss_dssp HHH-HHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHH-HhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 444 46789987644 45555 45778899988888775
No 429
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=45.76 E-value=35 Score=34.77 Aligned_cols=86 Identities=10% Similarity=0.286 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc---ccccceeec----CC----------------CHHHHHHHHHhc
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT---DQIGMFCYT----GL----------------NATQVEKLIKEH 97 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~---~Q~GmFs~~----gL----------------~~~qv~~L~~~~ 97 (420)
+-++++.+|+..+.+.|.+.|++. | .|.-+. .+.++++|- ++ +++-.++|.++.
T Consensus 385 ~gl~~~~~~~~~~a~~l~~~L~~~--p-g~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G 461 (511)
T 3vp6_A 385 VGFENQINKCLELAEYLYAKIKNR--E-EFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESG 461 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSC--T-TEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--C-CEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcC
Confidence 346677888999999999999764 2 255554 456777763 11 123456677665
Q ss_pred ceEEc----CCC----ceecc--cCCcCCHHHHHHHHHhhCC
Q psy16707 98 SVYLT----KDG----RISMA--GVTSKNVGYLAKAIHANGS 129 (420)
Q Consensus 98 ~IY~~----~~G----Rinva--gl~~~ni~~va~ai~~v~~ 129 (420)
.+++. ..| ||+++ ..+..+|+++.++|.++|.
T Consensus 462 ~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~ 503 (511)
T 3vp6_A 462 TTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQ 503 (511)
T ss_dssp SCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 44443 233 56763 3456889999999999875
No 430
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=44.54 E-value=83 Score=33.99 Aligned_cols=45 Identities=20% Similarity=0.303 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHhCCeEEeCCC----cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707 375 GLNATQVEKLIKEHSVYLTKDG----RISMAG-VTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 375 ~l~~~~v~~Ll~e~~Vy~~p~g----Ris~ag-l~~~ni~~la~AI~~vv 419 (420)
|.+...+...+.++||++.+.+ |+++.- .+.++++.+.+++.++.
T Consensus 514 g~~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~ 563 (730)
T 1c4k_A 514 GVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQ 563 (730)
T ss_dssp CCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 4566666544566799997643 666653 35578999999998753
No 431
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=43.95 E-value=1.3 Score=49.04 Aligned_cols=39 Identities=10% Similarity=0.090 Sum_probs=29.7
Q ss_pred HHHHHHhCCeEEeCCC---cEEE-cccCCCCHHHHHHHHHHHhC
Q psy16707 381 VEKLIKEHSVYLTKDG---RISM-AGVTSKNVGYLAKAIHAVTK 420 (420)
Q Consensus 381 v~~Ll~e~~Vy~~p~g---Ris~-agl~~~ni~~la~AI~~vv~ 420 (420)
++.| .+.||++.|.| ||+. ..+++++|+.+.++|.++++
T Consensus 784 ~~~l-~e~Gv~v~p~g~~lrl~pp~~~t~e~id~~~~~l~~~l~ 826 (831)
T 4a0g_A 784 LIML-REDGIFTRPLGNVIYLMCGPCTSPEICRRLLTKLYKRLG 826 (831)
T ss_dssp HHHH-HHTTEECCCBTTEEEEECCTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHH-HHCCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 3455 57999999976 6652 24689999999999998763
No 432
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=43.55 E-value=53 Score=33.02 Aligned_cols=86 Identities=14% Similarity=0.314 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeec--CC---CHHHHHHHHHhcceEEcC---CC----c
Q psy16707 40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT--GL---NATQVEKLIKEHSVYLTK---DG----R 106 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~--gL---~~~qv~~L~~~~~IY~~~---~G----R 106 (420)
.+-++++.+|...+++.|.+.|++.. .|.-+. .+.++++|. |. +.+-.++|.++..+|+.+ .| |
T Consensus 368 ~~g~~~~~~~~~~~a~~l~~~L~~~~---g~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR 444 (475)
T 3k40_A 368 VENLQAHIRRHCNFAKQFGDLCVADS---RFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLR 444 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHST---TEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CEEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEE
Confidence 34578888999999999999998752 244333 356676663 43 456677888887777642 34 6
Q ss_pred eecccC--CcCCHHHHHHHHHhhC
Q psy16707 107 ISMAGV--TSKNVGYLAKAIHANG 128 (420)
Q Consensus 107 invagl--~~~ni~~va~ai~~v~ 128 (420)
+++.+. +..+|++++++|.+++
T Consensus 445 ~~~~~~~tt~~di~~~~~~i~~~~ 468 (475)
T 3k40_A 445 MAICSRFTQSEDMEYSWKEVSAAA 468 (475)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Confidence 676653 5679999999998864
No 433
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=43.15 E-value=72 Score=30.35 Aligned_cols=60 Identities=7% Similarity=0.058 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--ccccc--ee--ec---CCCHHHHHHHHHhcceEEcC
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGM--FC--YT---GLNATQVEKLIKEHSVYLTK 103 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~Q~Gm--Fs--~~---gL~~~qv~~L~~~~~IY~~~ 103 (420)
+.++++.+|++.+++.|.+.|++.. + +.... .+.+. |. +- |.+.+++...-++++|++..
T Consensus 266 ~~l~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~ 334 (390)
T 3b8x_A 266 KKLPRFISVRRKNAEYFLDKFKDHP--Y-LDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRP 334 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCS--S-EEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC--C-cccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeee
Confidence 3456778888899999999997641 1 22111 12333 32 23 56777665433567998764
No 434
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=42.06 E-value=23 Score=33.96 Aligned_cols=51 Identities=12% Similarity=0.253 Sum_probs=31.9
Q ss_pred cccceeecCC----CHHHH-HHHHHhcceEEcCC--Cceecc---cCCcCCHHHHHHHHHhh
Q psy16707 76 QIGMFCYTGL----NATQV-EKLIKEHSVYLTKD--GRISMA---GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 76 Q~GmFs~~gL----~~~qv-~~L~~~~~IY~~~~--GRinva---gl~~~ni~~va~ai~~v 127 (420)
..|.|...-+ +.+++ +.| .+++|++.+. +.|-++ ..+..+++.+.++|.++
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 391 (395)
T 3nx3_A 331 GLGFMQGLSLDKSVKVAKVIQKC-QENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKA 391 (395)
T ss_dssp EETTEEEEEECTTSCHHHHHHHH-HHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEeCCcchHHHHHHHH-HHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4455544332 23343 455 4568888654 455554 56788999999998876
No 435
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=40.68 E-value=85 Score=33.92 Aligned_cols=44 Identities=20% Similarity=0.271 Sum_probs=31.9
Q ss_pred CCCHHHHHHHHHhCCeEEeCCC----cEEEcc-cCCCCHHHHHHHHHHH
Q psy16707 375 GLNATQVEKLIKEHSVYLTKDG----RISMAG-VTSKNVGYLAKAIHAV 418 (420)
Q Consensus 375 ~l~~~~v~~Ll~e~~Vy~~p~g----Ris~ag-l~~~ni~~la~AI~~v 418 (420)
|.+..++...++++||++...+ |+.+.- .+.++++++.+|+.+.
T Consensus 553 g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~~ 601 (755)
T 2vyc_A 553 GVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSF 601 (755)
T ss_dssp CCCHHHHHHHHHTTTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHCCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4555777655577999986533 666653 4888899999999875
No 436
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=39.43 E-value=39 Score=32.73 Aligned_cols=86 Identities=15% Similarity=0.028 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCc-----eEEecCC----CHHHHHHHHHhCCeEEeCCC------
Q psy16707 332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIG-----MFCYTGL----NATQVEKLIKEHSVYLTKDG------ 396 (420)
Q Consensus 332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~G-----mF~~~~l----~~~~v~~Ll~e~~Vy~~p~g------ 396 (420)
+.+....++.++.++.+.+.|++.+.-. .. +.+..+ .|+.+.+ +.+.+...+++.||++..+-
T Consensus 248 ~~l~~~~~~~~~~~~~~~~~L~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~ 325 (377)
T 3ju7_A 248 KKWDDKLKERTRISEWYKQLLQSNGLMK-KG-WQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQ 325 (377)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHTTTTT-TT-CBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcc-cc-ccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHCCCceecccCCcccc
Confidence 3444444566666667777787764100 01 111111 1222222 25555444578899885420
Q ss_pred -----------------------cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707 397 -----------------------RISMA-GVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 -----------------------Ris~a-gl~~~ni~~la~AI~~vv 419 (420)
|+.+. .++++++++++++|.+++
T Consensus 326 ~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~ 372 (377)
T 3ju7_A 326 QVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKV 372 (377)
T ss_dssp SGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC--
T ss_pred chhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 33332 467788999999988764
No 437
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=44.98 E-value=6.5 Score=40.25 Aligned_cols=99 Identities=15% Similarity=0.046 Sum_probs=57.6
Q ss_pred CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707 159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT 238 (420)
Q Consensus 159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 238 (420)
+...||+.-|.|-..=| ...|.|.+|......+.....| |..-..+|.+.+++++-+ .+++
T Consensus 99 G~~yiD~~~~~~~~~lG--h~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~p~-------~~~v--------- 159 (465)
T 2yky_A 99 GHAYVNFLGEYTAGLFG--HSHPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRFPS-------IDLV--------- 159 (465)
Confidence 45678888776533334 2344455554443322112233 445556777777765421 1233
Q ss_pred CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707 239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP 290 (420)
Q Consensus 239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~ 290 (420)
+.+.|||.|+..++.+...+ ++++.|++.+++|--+..
T Consensus 160 -------------~~~nSGseA~~~Aik~ar~~-tgr~~ii~~~~~yHG~~~ 197 (465)
T 2yky_A 160 -------------RFTNSGTEANLMALATATAI-TGRKTVLAFDGGYHGGLL 197 (465)
Confidence 56899999998887654222 326899999999965543
No 438
>1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A*
Probab=36.92 E-value=49 Score=34.67 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=34.3
Q ss_pred CCHHHHHHHH---Hhcc---eEEcCCCceecccCCcCCHHHHHHHHHhhCCCcc
Q psy16707 85 LNATQVEKLI---KEHS---VYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPI 132 (420)
Q Consensus 85 L~~~qv~~L~---~~~~---IY~~~~GRinvagl~~~ni~~va~ai~~v~~~p~ 132 (420)
+|++|...|- ++|+ |.+|.-+.|-+-|+...|++.+.+.+.++|..|.
T Consensus 116 lt~~qlr~la~ia~~yg~g~i~~TtRqniql~gi~~~~l~~i~~~L~~~gl~~~ 169 (566)
T 1zj8_A 116 LSAAALRTLGQISTEFARDTADISDRQNVQYHWIEVENVPEIWRRLDDVGLQTT 169 (566)
T ss_dssp ECHHHHHHHHHHHHHHSTTEEEECTTSCEEEEEECGGGHHHHHHHHHTTTCBCT
T ss_pred CCHHHHHHHHHHHHHHCCCeEEEECCccEEEecCCHHHHHHHHHHHHHcCCCCC
Confidence 6777776553 4444 7777777888888888888888888887775553
No 439
>3r8n_R 30S ribosomal protein S18; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_R 3fih_R* 3iy8_R 3j18_R* 2wwl_R 3oar_R 3oaq_R 3ofb_R 3ofa_R 3ofp_R 3ofx_R 3ofy_R 3ofo_R 3r8o_R 4a2i_R 4gd1_R 4gd2_R
Probab=35.14 E-value=13 Score=27.08 Aligned_cols=40 Identities=33% Similarity=0.562 Sum_probs=32.7
Q ss_pred HHHHHHHhcceEEcCCCce---ecccCCcCCHHHHHHHHHhh---CCCcc
Q psy16707 89 QVEKLIKEHSVYLTKDGRI---SMAGVTSKNVGYLAKAIHAN---GSLPI 132 (420)
Q Consensus 89 qv~~L~~~~~IY~~~~GRi---nvagl~~~ni~~va~ai~~v---~~~p~ 132 (420)
.++.|+ + |+++.|+| .+.|++.++-..++.||... |.+|.
T Consensus 6 nv~lL~-~---Fis~~GkIlprr~TGlc~k~QR~l~~AIKrAR~~~LlP~ 51 (55)
T 3r8n_R 6 DIATLK-N---YITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPY 51 (55)
T ss_dssp CHHHHG-G---GBCTTCCBCCHHHHCCCHHHHHHHHHHHHHHHHTTSSCS
T ss_pred CHHHHH-H---HcCCCCCCcCccccccCHHHHHHHHHHHHHHHHhccCCc
Confidence 355553 3 69999999 49999999999999999987 77774
No 440
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=34.48 E-value=29 Score=34.40 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=25.2
Q ss_pred HHHHHHhcceEEcCCC------ceecc-cCCcCCHHHHHHHHHhh
Q psy16707 90 VEKLIKEHSVYLTKDG------RISMA-GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 90 v~~L~~~~~IY~~~~G------Rinva-gl~~~ni~~va~ai~~v 127 (420)
++.| .+++|++.+.| ||+++ ..+..+++...++|.++
T Consensus 404 ~~~l-~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 447 (451)
T 3oks_A 404 CAGA-HAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEV 447 (451)
T ss_dssp HHHH-HHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHH-HhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 3444 46689887543 45545 45778999999988775
No 441
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=33.23 E-value=2e+02 Score=26.50 Aligned_cols=75 Identities=8% Similarity=0.057 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccc-cccccceee--cCCC----HHHHHHHHHhcceEEcCCC----------ceecc-
Q psy16707 49 RIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCY--TGLN----ATQVEKLIKEHSVYLTKDG----------RISMA- 110 (420)
Q Consensus 49 Ri~~~R~~l~~~L~~~~~~~~w~~i-~~Q~GmFs~--~gL~----~~qv~~L~~~~~IY~~~~G----------Rinva- 110 (420)
+....|+.|.+.|++. + .+... ....+.|.+ ++.. .+++...-.+++|++.+.. |+++.
T Consensus 262 ~~~~~~~~l~~~L~~~--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~ 338 (359)
T 3pj0_A 262 EYFEAAKGLAERFNSC--S-GVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGD 338 (359)
T ss_dssp HHHHHHHHHHHHHHTS--T-TEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCT
T ss_pred HHHHHHHHHHHHHhhC--C-CceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecC
Confidence 4567788888888875 1 13332 223333333 3432 3455444467899887652 45543
Q ss_pred cCCcCCHHHHHHHHHh
Q psy16707 111 GVTSKNVGYLAKAIHA 126 (420)
Q Consensus 111 gl~~~ni~~va~ai~~ 126 (420)
+......+.+.+++..
T Consensus 339 ~~~~~~~e~l~~~l~~ 354 (359)
T 3pj0_A 339 AFAEIPAKNLELVFRC 354 (359)
T ss_dssp TGGGSCHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHH
Confidence 2223445555555544
No 442
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=32.33 E-value=93 Score=31.12 Aligned_cols=85 Identities=11% Similarity=0.246 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeec--C---CCHHHHHHHHHhcceEEcC---CC----ce
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT--G---LNATQVEKLIKEHSVYLTK---DG----RI 107 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~--g---L~~~qv~~L~~~~~IY~~~---~G----Ri 107 (420)
+-+++|.+|...+++.|.+.|++.. .|.-+. .+.++++|. + ++.+-.++|.++..+|+.+ .| |+
T Consensus 376 ~g~~~~~~~~~~~a~~l~~~L~~~~---g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~ 452 (481)
T 4e1o_A 376 KNLQAHVRHGTEMAKYFESLVRNDP---SFEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRF 452 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCT---TEECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEE
Confidence 4577788899999999999998642 144332 245565553 4 2455667787776666542 33 56
Q ss_pred ecccC--CcCCHHHHHHHHHhhC
Q psy16707 108 SMAGV--TSKNVGYLAKAIHANG 128 (420)
Q Consensus 108 nvagl--~~~ni~~va~ai~~v~ 128 (420)
++.+- +..+|+++.++|.+++
T Consensus 453 ~~~~~~tt~~di~~~~~~i~~~~ 475 (481)
T 4e1o_A 453 TVTSQFTTRDDILRDWNLIRDAA 475 (481)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHH
Confidence 66654 4579999999998763
No 443
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=31.28 E-value=22 Score=30.11 Aligned_cols=41 Identities=17% Similarity=0.344 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHhcceEE---cCCCceecccCCcCCHHHHHHHHHhhCCCcc
Q psy16707 84 GLNATQVEKLIKEHSVYL---TKDGRISMAGVTSKNVGYLAKAIHANGSLPI 132 (420)
Q Consensus 84 gL~~~qv~~L~~~~~IY~---~~~GRinvagl~~~ni~~va~ai~~v~~~p~ 132 (420)
-||++|++.||+-|..|= -.+|.|+.. .+..++...|-.|.
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~--------El~~~lr~lG~~~t 45 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAA--------KVGDLLRCLGMNPT 45 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGG--------GHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHH--------HHHHHHHHcCCCCC
Confidence 589999999999998874 367999843 45667777887764
No 444
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=30.01 E-value=1e+02 Score=30.68 Aligned_cols=84 Identities=11% Similarity=0.212 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecCCC---------HHHHHHHHHhcceEEc---CCC--
Q psy16707 41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGLN---------ATQVEKLIKEHSVYLT---KDG-- 105 (420)
Q Consensus 41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~gL~---------~~qv~~L~~~~~IY~~---~~G-- 105 (420)
+.++.+.+|+..+++.|.+.|++.. .|..+. .+.++++|--.. .+-.+.|.++-.+++. ..|
T Consensus 390 ~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~ 466 (497)
T 2qma_A 390 KALGDMYDHLLAQTLEVADMIRTND---QFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKT 466 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCT---TEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC---CeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEE
Confidence 3466778889999999999998642 244332 356777765322 2223556555333332 122
Q ss_pred --ceecc--cCCcCCHHHHHHHHHhh
Q psy16707 106 --RISMA--GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 106 --Rinva--gl~~~ni~~va~ai~~v 127 (420)
||++. ..+.++|+.+.++|.++
T Consensus 467 ~lRis~~~~~~t~edi~~~~~~l~~~ 492 (497)
T 2qma_A 467 ALKFTILNPCLTTSDFESLLSKINML 492 (497)
T ss_dssp EEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 66664 45778999999998876
No 445
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=29.72 E-value=35 Score=28.60 Aligned_cols=42 Identities=24% Similarity=0.365 Sum_probs=32.4
Q ss_pred cCCCHHHHHHHHHhcceE-EcCCCceecccCCcCCHHHHHHHHHhhCCCcc
Q psy16707 83 TGLNATQVEKLIKEHSVY-LTKDGRISMAGVTSKNVGYLAKAIHANGSLPI 132 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY-~~~~GRinvagl~~~ni~~va~ai~~v~~~p~ 132 (420)
..||++|++.|++-|..| .-.+|+|+. +.+..++...|..|.
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~--------~El~~~l~~lg~~~~ 50 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGM--------EDLKDMFSSLGRVPP 50 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCH--------HHHHHHHHHTTSCCC
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcH--------HHHHHHHHHcCCCcc
Confidence 469999999999999877 447899884 456677777776664
No 446
>3i1m_R 30S ribosomal protein S18; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_R* 1vs5_R 3i1o_R 3i1q_R 3i1s_R 3i1z_R 3i21_R 3izv_V* 3izw_V* 3kc4_R 3or9_R 3ora_R 3sfs_R* 3uoq_R* 4gaq_R* 4gas_R* 2qal_R* 1p6g_R 1p87_R 2aw7_R ...
Probab=27.98 E-value=20 Score=27.77 Aligned_cols=44 Identities=30% Similarity=0.533 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHhcceEEcCCCce---ecccCCcCCHHHHHHHHHhh---CCCcc
Q psy16707 85 LNATQVEKLIKEHSVYLTKDGRI---SMAGVTSKNVGYLAKAIHAN---GSLPI 132 (420)
Q Consensus 85 L~~~qv~~L~~~~~IY~~~~GRi---nvagl~~~ni~~va~ai~~v---~~~p~ 132 (420)
++-..++.|+ + |+++.|+| .+.|+...+-..++.||..+ |.+|.
T Consensus 21 iDYknv~lL~-~---Fis~~GkIlprr~TGlc~k~QR~l~~AIKrAR~~gLlP~ 70 (75)
T 3i1m_R 21 IDYKDIATLK-N---YITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPY 70 (75)
T ss_dssp CSTTCHHHHG-G---GBCTTCCBCCHHHHCCCHHHHHHHHHHHHHHHTTTSSCS
T ss_pred CCcCCHHHHH-H---HcCcCCCCcCccccccCHHHHHHHHHHHHHHHHhccCCc
Confidence 3455667674 3 69999999 49999999999999999987 77874
No 447
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=25.75 E-value=2.6e+02 Score=27.47 Aligned_cols=72 Identities=7% Similarity=0.172 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccccc---ceeecCCCHHHHH-HHHHhcceEEcCCC----ceeccc-CCcCC
Q psy16707 46 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIG---MFCYTGLNATQVE-KLIKEHSVYLTKDG----RISMAG-VTSKN 116 (420)
Q Consensus 46 m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~G---mFs~~gL~~~qv~-~L~~~~~IY~~~~G----Rinvag-l~~~n 116 (420)
+.++...+++.|.+. .+..+..+.+ .|.+.|++..++. .|+++ +|++...| |++++. .+..+
T Consensus 269 ~~~~~~~l~~~l~~~--------g~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~~-GI~v~~~g~~~iRi~~~~~~t~e~ 339 (446)
T 2x3l_A 269 FFAKRAQLIECLENK--------GFEMLQVDDPLKLLIKYEGFTGHDIQNWFMNA-HIYLELADDYQALAILPLWHHDDT 339 (446)
T ss_dssp HHHHHHHHHHHHHHH--------TCEEEECSSTTEEEEECTTSCHHHHHHHHHHT-TEEESEECSSCEEEECCCCCTTCC
T ss_pred HHHHHHHHHHHHHHc--------CCEECcCCCCeEEEEEeCCcCHHHHHHHHHHC-CCEEEecCCCEEEEEeecCCCHHH
Confidence 555555555555544 1222222222 3333377777665 56555 99986233 677754 46778
Q ss_pred HHHHHHHHHhh
Q psy16707 117 VGYLAKAIHAN 127 (420)
Q Consensus 117 i~~va~ai~~v 127 (420)
+ .++++|.++
T Consensus 340 i-~l~~aL~~~ 349 (446)
T 2x3l_A 340 Y-LFDSLLRKI 349 (446)
T ss_dssp C-CHHHHHHHH
T ss_pred H-HHHHHHHHH
Confidence 8 999998887
No 448
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=25.32 E-value=39 Score=23.06 Aligned_cols=15 Identities=20% Similarity=0.465 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHH
Q psy16707 40 LTEVKGMADRIISMR 54 (420)
Q Consensus 40 ~~el~~m~~Ri~~~R 54 (420)
.+++++|..|+..+|
T Consensus 25 Eedi~~MqsRLaALR 39 (40)
T 2xze_Q 25 EEALEAMQSRLATLR 39 (40)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 467999999999887
No 449
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=25.28 E-value=1.1e+02 Score=21.99 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16707 326 LKAQWLTEVKGMADRIISMRQSLKDNLQK 354 (420)
Q Consensus 326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~ 354 (420)
|..+-+.|++..+.||...|+-..+++++
T Consensus 22 Ld~~Me~Ei~elr~RY~~KRqPIldAi~a 50 (51)
T 2jo8_A 22 LDPMMEQEIEEIRQKYQSKRQPILDAIEA 50 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHhHhhHHHHHhc
Confidence 44566788899999999999999888763
No 450
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=25.17 E-value=49 Score=24.09 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=22.1
Q ss_pred cCCCCCCccccc-----cccceeecCCCHHHHHHH
Q psy16707 64 EGSNKPWNHITD-----QIGMFCYTGLNATQVEKL 93 (420)
Q Consensus 64 ~~~~~~w~~i~~-----Q~GmFs~~gL~~~qv~~L 93 (420)
.+.|-+|.|+.. ..| |++.|+.++=...|
T Consensus 9 Is~Ptnf~Hv~HvG~d~~~g-f~~~g~pp~W~~ll 42 (59)
T 1cee_B 9 IGAPSGFKHVSHVGWDPQNG-FDVNNLDPDLRSLF 42 (59)
T ss_dssp SCCCCCCEEEEEECCCTTTC-CCCSSCCHHHHHHH
T ss_pred ccCCCCCCCcceeccCCCCC-cccCCCCHHHHHHH
Confidence 467889999887 678 88889976655544
No 451
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=23.59 E-value=2.6e+02 Score=26.52 Aligned_cols=21 Identities=10% Similarity=0.262 Sum_probs=13.5
Q ss_pred cccceeecCCC--HHHHHHHHHhc
Q psy16707 76 QIGMFCYTGLN--ATQVEKLIKEH 97 (420)
Q Consensus 76 Q~GmFs~~gL~--~~qv~~L~~~~ 97 (420)
+-|||++ -+. +++.+.+.++.
T Consensus 309 ~g~~~~~-~~~~~~~~~~~l~~~~ 331 (398)
T 2rfv_A 309 PGGIISF-EIAGGLEAGRRMINSV 331 (398)
T ss_dssp CCSEEEE-EETTHHHHHHHHHTTC
T ss_pred CceEEEE-EEcCCHHHHHHHHHhC
Confidence 4778887 454 35667776665
No 452
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A*
Probab=23.56 E-value=1.2e+02 Score=28.74 Aligned_cols=49 Identities=22% Similarity=0.230 Sum_probs=37.4
Q ss_pred cccceeecCCCHHHHHHHHHhcceEEcCCCceecccCCcC----------CHHHHHHHHHhhC
Q psy16707 76 QIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK----------NVGYLAKAIHANG 128 (420)
Q Consensus 76 Q~GmFs~~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~----------ni~~va~ai~~v~ 128 (420)
+-+|.+..|+++++++.+.+++. ..|++.||.+|.. .|+.+.+.+.+-|
T Consensus 129 ~g~M~aV~~~~~~~v~~~l~~~~----~~~~v~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g 187 (309)
T 1mla_A 129 TGAMAAIIGLDDASIAKACEEAA----EGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAG 187 (309)
T ss_dssp SEEEEEEESCCHHHHHHHHHHHC----TTSCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTT
T ss_pred CccEEEEcCCCHHHHHHHHHhcC----CCCeEEEEEEcCCCcEEEEccHHHHHHHHHHHHhcC
Confidence 46899999999999999988762 2457777777763 4677777777765
No 453
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=23.49 E-value=25 Score=30.29 Aligned_cols=42 Identities=21% Similarity=0.386 Sum_probs=32.2
Q ss_pred cCCCHHHHHHHHHhcceE-EcCCCceecccCCcCCHHHHHHHHHhhCCCcc
Q psy16707 83 TGLNATQVEKLIKEHSVY-LTKDGRISMAGVTSKNVGYLAKAIHANGSLPI 132 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY-~~~~GRinvagl~~~ni~~va~ai~~v~~~p~ 132 (420)
+.||++|++.|++-|..| .-.+|.|+ .+.+..++...|..|.
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~--------~~El~~~l~~lg~~~~ 45 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSIS--------SSELATVMRSLGLSPS 45 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBC--------HHHHHHHHHHHTCCCC
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHHcCCChh
Confidence 579999999999999877 45788887 3456677777776654
No 454
>2vqe_R 30S ribosomal protein S18; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.4.8.1 PDB: 1fka_R 1fjg_R 1gix_U* 1hnw_R* 1hnx_R* 1hnz_R* 1hr0_R 1ibk_R* 1ibl_R* 1ibm_R 1j5e_R 1jgo_U* 1jgp_U* 1jgq_U* 1ml5_U* 1n32_R* 1n33_R* 1n34_R 1n36_R 1xmo_R* ...
Probab=22.63 E-value=28 Score=27.76 Aligned_cols=44 Identities=34% Similarity=0.531 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHhcceEEcCCCcee---cccCCcCCHHHHHHHHHhh---CCCcc
Q psy16707 85 LNATQVEKLIKEHSVYLTKDGRIS---MAGVTSKNVGYLAKAIHAN---GSLPI 132 (420)
Q Consensus 85 L~~~qv~~L~~~~~IY~~~~GRin---vagl~~~ni~~va~ai~~v---~~~p~ 132 (420)
++-..++.|+ + |+++.|+|- +.|+...+-..|+.||..+ |.||.
T Consensus 32 iDYKnv~lL~-~---Fise~GkIlprriTGlc~k~QR~l~~AIKrAR~lgLLP~ 81 (88)
T 2vqe_R 32 RDYRNVEVLK-R---FLSETGKILPRRRTGLSGKEQRILAKTIKRARILGLLPF 81 (88)
T ss_dssp TCTTCHHHHG-G---GBCSSSCBCCHHHHCCCHHHHHHHHHHHHHHHHTTSSCS
T ss_pred CCcCCHHHHH-H---HcccCCCCCchhhcCCCHHHHHHHHHHHHHHHHHhcCCc
Confidence 5666787774 3 699999995 9999999999999999987 77884
No 455
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=22.23 E-value=39 Score=27.64 Aligned_cols=42 Identities=17% Similarity=0.311 Sum_probs=31.4
Q ss_pred cCCCHHHHHHHHHhcceE-EcCCCceecccCCcCCHHHHHHHHHhhCCCcc
Q psy16707 83 TGLNATQVEKLIKEHSVY-LTKDGRISMAGVTSKNVGYLAKAIHANGSLPI 132 (420)
Q Consensus 83 ~gL~~~qv~~L~~~~~IY-~~~~GRinvagl~~~ni~~va~ai~~v~~~p~ 132 (420)
.-||++|++.|++-|..| .-.+|.|+..- +..++...|..|.
T Consensus 2 s~lt~eqi~el~~~F~~~D~d~~G~I~~~E--------l~~~l~~~~~~~~ 44 (148)
T 2lmt_A 2 SELTEEQIAEFKDAFVQFDKEGTGKIATRE--------LGTLMRTLGQNPT 44 (148)
T ss_dssp CSCCSHHHHHHHHHHHHHHCSSCCEEEGGG--------HHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeECHHH--------HHHHHHhcCCCch
Confidence 458999999999998877 56899998543 4556666666553
No 456
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=22.08 E-value=1.3e+02 Score=36.69 Aligned_cols=54 Identities=13% Similarity=0.194 Sum_probs=39.7
Q ss_pred cccceeecCCCHHHHHHHHHhcceEEcCCCceecccCCc----------CCHHHHHHHHHhhCC
Q psy16707 76 QIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTS----------KNVGYLAKAIHANGS 129 (420)
Q Consensus 76 Q~GmFs~~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~----------~ni~~va~ai~~v~~ 129 (420)
..+|.+..|++.++++.+.++..-++..++++.||..|. ..|+.+++.+.+.|-
T Consensus 335 ~G~MlAV~gl~~e~v~~ll~~~~~~l~~g~~V~IA~~NsP~qvVISG~~~aL~~l~~~L~~~ga 398 (2051)
T 2uv8_G 335 PSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKA 398 (2051)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHHTSCGGGCCEEEECCSSSEEEEESCHHHHHHHHHHHHHHSC
T ss_pred ccceEEeecCCHHHHHHHHHHhhhccCCCCceEEEEEcCCCCeEecCCHHHHHHHHHHHHhcCC
Confidence 567999999999999999887643333344666666665 557888888877764
No 457
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=20.68 E-value=1.4e+02 Score=29.39 Aligned_cols=38 Identities=11% Similarity=0.063 Sum_probs=27.4
Q ss_pred HHHHHHHhcceEEcCC-Cceecc---cCCcCCHHHHHHHHHhh
Q psy16707 89 QVEKLIKEHSVYLTKD-GRISMA---GVTSKNVGYLAKAIHAN 127 (420)
Q Consensus 89 qv~~L~~~~~IY~~~~-GRinva---gl~~~ni~~va~ai~~v 127 (420)
-++.|. +++|++.+. ++|-|+ ..+...++.+.++|.++
T Consensus 404 ~~~~l~-~~Gv~v~~~g~~iRi~~~~~~t~e~i~~~l~~l~~~ 445 (459)
T 4a6r_A 404 CRDIFF-RNNLIMRACGDHIVSAPPLVMTRAEVDEMLAVAERC 445 (459)
T ss_dssp HHHHHH-HTTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHH-HCCeEEecCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 345565 458988764 455555 67889999999998876
No 458
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=20.36 E-value=2.6e+02 Score=27.79 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=16.8
Q ss_pred cEEEcccCCCCHHHHHHHHHHHh
Q psy16707 397 RISMAGVTSKNVGYLAKAIHAVT 419 (420)
Q Consensus 397 Ris~agl~~~ni~~la~AI~~vv 419 (420)
|||+. .++++.+.+.+.+++
T Consensus 423 RlSvG---~Edid~li~~L~~al 442 (445)
T 1qgn_A 423 RFSFG---VEDFDDLKADILQAL 442 (445)
T ss_dssp EEECC---SSCHHHHHHHHHHHH
T ss_pred EEEec---cCCHHHHHHHHHHHH
Confidence 88875 578999999998875
No 459
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ...
Probab=20.34 E-value=2.3e+02 Score=27.04 Aligned_cols=102 Identities=6% Similarity=0.011 Sum_probs=57.8
Q ss_pred HHHHHHHHhCChhHHHH-HHHHHHHHHHHHHHHH----HHHHHHHHh--cCCCCCCccccccccceeecCCCHHHHHHHH
Q psy16707 22 GARIVQEILGDPKLKAQ-WLTEVKGMADRIISMR----QSLKDNLQK--EGSNKPWNHITDQIGMFCYTGLNATQVEKLI 94 (420)
Q Consensus 22 Ga~iv~~IL~~~~L~~~-W~~el~~m~~Ri~~~R----~~l~~~L~~--~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~ 94 (420)
.-.+...++.+|.+.++ +..|...+.+.++... ..+.+.+.+ .+.|..|..+-... +.-.++.+++....
T Consensus 119 ~l~ll~~~~~~p~f~~~~~~~~k~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~---~l~~it~~~l~~f~ 195 (439)
T 1pp9_B 119 LMEFLLNVTTAPEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDY---RIGKVTPVELHDYV 195 (439)
T ss_dssp HHHHHHHHHHCBCCCHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHBSSGGGSCSSCCGG---GTTTCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCCCccCCHH---HHhhcCHHHHHHHH
Confidence 34566677778877654 3444444444443321 122333322 12222233222211 33578899998887
Q ss_pred HhcceEEcCCCceecccCCcCCHHHHHHHHHhhCCCc
Q psy16707 95 KEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLP 131 (420)
Q Consensus 95 ~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v~~~p 131 (420)
++| |-..+-.+.|+| + +.+.+.+.+....++|
T Consensus 196 ~~~--y~~~~~~l~v~G-~--~~~~~~~~~~~~~~~~ 227 (439)
T 1pp9_B 196 QNH--FTSARMALIGLG-V--SHPVLKQVAEQFLNIR 227 (439)
T ss_dssp HHH--CSGGGEEEEEES-S--CHHHHHHHHHHHCCCC
T ss_pred HHh--CCCCceEEEEeC-C--CHHHHHHHHHHHhCCC
Confidence 775 777777888888 3 7888888887775465
No 460
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=20.13 E-value=5.1e+02 Score=24.72 Aligned_cols=50 Identities=10% Similarity=0.161 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccc------------------CCCCceEEe-cCCCHHHHHHHHHhCCeEE
Q psy16707 339 DRIISMRQSLKDNLQKEGSNKPWNHI------------------TDQIGMFCY-TGLNATQVEKLIKEHSVYL 392 (420)
Q Consensus 339 ~r~~~~R~~l~~~L~~~g~~~~w~~i------------------~~q~GmF~~-~~l~~~~v~~Ll~e~~Vy~ 392 (420)
++..+.++.+.+.|++... +..+ ....|++.+ ++ +.+.+..++++.+|++
T Consensus 284 ~~~~~~~~~l~~~L~~~~~---v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~~-~~~~~~~~l~~~~i~~ 352 (412)
T 2cb1_A 284 ARMSETARFLAERLQGHPK---VKALRYPGLPEDPAHRNARKYLASGGPILTLDLG-DLERASRFLGAIRLLK 352 (412)
T ss_dssp HHHHHHHHHHHHHHHTCTT---CSEEECTTSTTCTTHHHHHHHCSSSCSEEEEECS-SHHHHHHHHHHCSSEE
T ss_pred HHHHHHHHHHHHHHHcCCC---eeEEECCCCCCCccHHHHHHhCCCCceEEEEEeC-CHHHHHHHHHhCCeee
Confidence 4455667788888876421 2211 124566664 35 6778888888999997
Done!