Your job contains 1 sequence.
>psy16713
SQAATPHKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRHLSLKGAGS
ATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYH
ELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLE
MVTSSNETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQSNIEMQN
ASVAAANAELMQQADKNKDSEQQKYRNFNLSQQQQQQVHQQQQQNSSQPSQNHQEQRHMD
SGAPNVPYQRSHEMDTSEPPGGGQENKGTGPQTSHFKKDKDLETEPMAKSFLFSFKQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16713
(357 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1918972 - symbol:Cic "capicua homolog (Drosophila... 422 1.9e-60 2
UNIPROTKB|Q96RK0 - symbol:CIC "Protein capicua homolog" s... 420 1.1e-38 2
FB|FBgn0262582 - symbol:cic "capicua" species:7227 "Droso... 410 3.4e-38 2
UNIPROTKB|Q8WY36 - symbol:BBX "HMG box transcription fact... 243 4.0e-21 2
MGI|MGI:1917758 - symbol:Bbx "bobby sox homolog (Drosophi... 240 7.4e-19 2
WB|WBGene00004950 - symbol:sox-3 species:6239 "Caenorhabd... 182 2.9e-16 2
UNIPROTKB|B4DWU7 - symbol:SOX15 "Protein SOX-15" species:... 183 7.4e-14 1
UNIPROTKB|O60248 - symbol:SOX15 "Protein SOX-15" species:... 183 7.4e-14 1
UNIPROTKB|F1ST29 - symbol:SOX15 "Uncharacterized protein"... 183 7.4e-14 1
UNIPROTKB|A6PVD3 - symbol:SOX10 "Transcription factor SOX... 157 8.6e-14 2
UNIPROTKB|E2R3H4 - symbol:SOX15 "Uncharacterized protein"... 181 1.2e-13 1
FB|FBgn0024251 - symbol:bbx "bobby sox" species:7227 "Dro... 201 3.2e-13 1
MGI|MGI:98363 - symbol:Sox15 "SRY-box containing gene 15"... 177 3.5e-13 1
UNIPROTKB|E1B9L6 - symbol:SOX15 "Uncharacterized protein"... 172 1.3e-12 1
UNIPROTKB|F1S992 - symbol:SOX-6 "Uncharacterized protein"... 178 1.4e-12 1
RGD|1309072 - symbol:Sox8 "SRY (sex determining region Y)... 188 2.0e-12 2
MGI|MGI:98370 - symbol:Sox8 "SRY-box containing gene 8" s... 188 2.0e-12 2
MGI|MGI:894659 - symbol:Hbp1 "high mobility group box tra... 191 2.4e-12 1
FB|FBgn0029123 - symbol:SoxN "SoxNeuro" species:7227 "Dro... 169 2.4e-12 3
UNIPROTKB|P48433 - symbol:SOX3 "Transcription factor SOX-... 184 3.5e-12 1
RGD|620444 - symbol:Hbp1 "HMG-box transcription factor 1"... 187 6.7e-12 1
UNIPROTKB|Q9PSV6 - symbol:Sox3 "SOX3" species:9031 "Gallu... 180 1.2e-11 1
UNIPROTKB|E2R0K1 - symbol:SOX8 "Uncharacterized protein" ... 184 1.2e-11 2
UNIPROTKB|Q5JRY4 - symbol:TCF7L2 "Transcription factor 7-... 161 2.2e-11 1
UNIPROTKB|Q5JRY5 - symbol:TCF7L2 "Transcription factor 7-... 161 2.2e-11 1
UNIPROTKB|F1S3U8 - symbol:SOX13 "Uncharacterized protein"... 183 2.2e-11 1
UNIPROTKB|Q86G49 - symbol:egl-13 "Protein EGL-13, isoform... 177 2.7e-11 1
UNIPROTKB|O57401 - symbol:SOX1 "Transcription factor SOX-... 179 2.7e-11 1
UNIPROTKB|E1BL97 - symbol:SOX13 "Uncharacterized protein"... 183 2.7e-11 1
UNIPROTKB|H2L0M3 - symbol:egl-13 "Protein EGL-13, isoform... 177 2.8e-11 1
UNIPROTKB|E1BHN5 - symbol:LOC614121 "Uncharacterized prot... 160 2.8e-11 1
UNIPROTKB|H0YBC8 - symbol:TCF7 "Transcription factor 7" s... 160 2.8e-11 1
UNIPROTKB|F6RRS7 - symbol:SOX18 "Uncharacterized protein"... 179 3.0e-11 1
FB|FBgn0005613 - symbol:Sox15 "Sox box protein 15" specie... 181 3.2e-11 2
UNIPROTKB|H0YAR8 - symbol:TCF7 "Transcription factor 7" s... 159 3.6e-11 1
UNIPROTKB|O00570 - symbol:SOX1 "Transcription factor SOX-... 178 4.0e-11 1
MGI|MGI:98368 - symbol:Sox6 "SRY-box containing gene 6" s... 183 4.3e-11 1
UNIPROTKB|Q6VVD7 - symbol:sox8 "Transcription factor Sox-... 179 4.5e-11 1
UNIPROTKB|F1MIK5 - symbol:SOX1 "Uncharacterized protein" ... 177 4.6e-11 1
MGI|MGI:98361 - symbol:Sox13 "SRY-box containing gene 13"... 181 4.6e-11 1
RGD|1309674 - symbol:Sox13 "SRY (sex determining region Y... 181 4.6e-11 1
UNIPROTKB|Q9UN79 - symbol:SOX13 "Transcription factor SOX... 181 4.7e-11 1
RGD|1309000 - symbol:Sox6 "SRY (sex determining region Y)... 182 5.2e-11 1
WB|WBGene00004949 - symbol:sox-2 species:6239 "Caenorhabd... 172 6.2e-11 1
UNIPROTKB|Q2PG84 - symbol:sox1 "Transcription factor Sox-... 174 6.3e-11 2
UNIPROTKB|Q4PIT4 - symbol:egl-13 "Protein EGL-13, isoform... 177 6.4e-11 1
ZFIN|ZDB-GENE-060322-5 - symbol:sox1b "SRY-box containing... 174 8.0e-11 1
WB|WBGene00001182 - symbol:egl-13 species:6239 "Caenorhab... 177 8.1e-11 1
UNIPROTKB|Q23045 - symbol:egl-13 "Protein EGL-13, isoform... 177 8.1e-11 1
ZFIN|ZDB-GENE-030909-1 - symbol:sox2 "SRY-box containing ... 172 1.0e-10 1
UNIPROTKB|F1MBL5 - symbol:SOX8 "Uncharacterized protein" ... 176 1.0e-10 1
UNIPROTKB|P48431 - symbol:SOX2 "Transcription factor SOX-... 172 1.1e-10 1
UNIPROTKB|B1PXF9 - symbol:Sox2 "Sex determining region Y-... 172 1.1e-10 1
ZFIN|ZDB-GENE-051113-268 - symbol:sox14 "SRY-box containi... 165 1.1e-10 1
UNIPROTKB|A2VDX8 - symbol:SOX2 "Uncharacterized protein" ... 172 1.1e-10 1
UNIPROTKB|P54231 - symbol:SOX2 "Transcription factor SOX-... 172 1.1e-10 1
UNIPROTKB|E2R1W3 - symbol:SOX2 "Uncharacterized protein" ... 172 1.1e-10 1
UNIPROTKB|A2TED3 - symbol:sox1 "Transcription factor Sox-... 172 1.2e-10 2
UNIPROTKB|Q9W7R6 - symbol:SOX14 "Transcription factor SOX... 165 1.2e-10 1
UNIPROTKB|O95416 - symbol:SOX14 "Transcription factor SOX... 165 1.2e-10 1
UNIPROTKB|P61259 - symbol:SOX14 "Transcription factor SOX... 165 1.2e-10 1
MGI|MGI:98362 - symbol:Sox14 "SRY-box containing gene 14"... 165 1.2e-10 1
RGD|1309654 - symbol:Sox14 "SRY (sex determining region Y... 165 1.2e-10 1
ZFIN|ZDB-GENE-040718-186 - symbol:sox1a "SRY-box containi... 172 1.3e-10 1
FB|FBgn0039938 - symbol:Sox102F "Sox102F" species:7227 "D... 177 1.3e-10 1
MGI|MGI:98364 - symbol:Sox2 "SRY-box containing gene 2" s... 171 1.4e-10 1
RGD|1565646 - symbol:Sox2 "SRY (sex determining region Y)... 171 1.4e-10 1
UNIPROTKB|F1NAU5 - symbol:SOX6 "Uncharacterized protein" ... 178 1.5e-10 1
UNIPROTKB|F6UQM4 - symbol:SOX6 "Uncharacterized protein" ... 178 1.5e-10 1
UNIPROTKB|P35712 - symbol:SOX6 "Transcription factor SOX-... 178 1.6e-10 1
UNIPROTKB|E2QTS7 - symbol:SOX6 "Uncharacterized protein" ... 178 1.6e-10 1
UNIPROTKB|A4QNG3 - symbol:sox14 "Transcription factor Sox... 164 1.6e-10 1
UNIPROTKB|B0ZTE2 - symbol:sox14 "Transcription factor Sox... 164 1.6e-10 1
UNIPROTKB|E1BE01 - symbol:SOX6 "Uncharacterized protein" ... 178 1.6e-10 1
ZFIN|ZDB-GENE-001103-2 - symbol:sox9b "SRY-box containing... 173 1.7e-10 1
UNIPROTKB|O42569 - symbol:sox2 "Transcription factor Sox-... 170 1.7e-10 1
UNIPROTKB|Q6NVN0 - symbol:sox2 "Transcription factor Sox-... 170 1.7e-10 1
ZFIN|ZDB-GENE-991213-1 - symbol:sox17 "SRY-box containing... 173 1.8e-10 1
UNIPROTKB|P48430 - symbol:SOX2 "Transcription factor SOX-... 170 1.8e-10 1
ZFIN|ZDB-GENE-980526-333 - symbol:sox3 "SRY-box containin... 169 1.9e-10 1
UNIPROTKB|A4IIJ8 - symbol:sox10 "Transcription factor Sox... 173 2.0e-10 1
UNIPROTKB|P40618 - symbol:HMGB3 "High mobility group prot... 152 2.1e-10 1
UNIPROTKB|P55863 - symbol:sox3-a "Transcription factor So... 169 2.2e-10 1
UNIPROTKB|F1SFJ1 - symbol:SOX5 "Uncharacterized protein" ... 169 2.4e-10 1
UNIPROTKB|Q28EW4 - symbol:sox13 "Transcription factor Sox... 174 2.5e-10 1
UNIPROTKB|F1NJ38 - symbol:F1NJ38 "Uncharacterized protein... 173 2.5e-10 1
UNIPROTKB|P40649 - symbol:sox13 "Transcription factor Sox... 174 2.5e-10 1
UNIPROTKB|Q3KQ35 - symbol:sox17a-a "Transcription factor ... 169 2.7e-10 2
UNIPROTKB|Q90ZH8 - symbol:sox18-a "Transcription factor S... 170 2.8e-10 1
ZFIN|ZDB-GENE-081120-6 - symbol:sox6 "SRY-box containing ... 175 3.2e-10 1
UNIPROTKB|P57073 - symbol:SOX8 "Transcription factor SOX-... 171 3.2e-10 2
UNIPROTKB|A7E3Q4 - symbol:HBP1 "HMG box-containing protei... 172 3.5e-10 1
UNIPROTKB|Q2KJ34 - symbol:HBP1 "HMG box-containing protei... 172 3.5e-10 1
UNIPROTKB|Q8AXX8 - symbol:sox10 "Transcription factor Sox... 171 3.6e-10 1
UNIPROTKB|O60381 - symbol:HBP1 "HMG box-containing protei... 172 3.6e-10 1
UNIPROTKB|E2RRE1 - symbol:HBP1 "Uncharacterized protein" ... 172 3.7e-10 1
UNIPROTKB|Q5FWM3 - symbol:sox3-b "Transcription factor So... 167 3.7e-10 1
UNIPROTKB|Q68FA4 - symbol:sox3 "Transcription factor Sox-... 167 3.7e-10 1
UNIPROTKB|P36402 - symbol:TCF7 "Transcription factor 7" s... 169 4.2e-10 1
UNIPROTKB|E1C2B1 - symbol:HBP1 "Uncharacterized protein" ... 169 4.7e-10 2
WARNING: Descriptions of 255 database sequences were not reported due to the
limiting value of parameter V = 100.
>MGI|MGI:1918972 [details] [associations]
symbol:Cic "capicua homolog (Drosophila)" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009071 MGI:MGI:1918972
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 eggNOG:NOG12793 GeneTree:ENSGT00530000063757
CTD:23152 HOVERGEN:HBG081174 OMA:DGCMKES ChiTaRS:CIC EMBL:AF363690
EMBL:AK004685 EMBL:AK147276 EMBL:AK147535 EMBL:AC156992
EMBL:BC040463 EMBL:BC058665 EMBL:AB093224 IPI:IPI00653910
IPI:IPI00974774 RefSeq:NP_001103601.1 RefSeq:NP_001103602.1
RefSeq:NP_082158.2 UniGene:Mm.28833 ProteinModelPortal:Q924A2
SMR:Q924A2 STRING:Q924A2 PhosphoSite:Q924A2 PaxDb:Q924A2
PRIDE:Q924A2 DNASU:71722 Ensembl:ENSMUST00000163320
Ensembl:ENSMUST00000169266 GeneID:71722 KEGG:mmu:71722
UCSC:uc009fsa.2 UCSC:uc009fsc.2 InParanoid:Q924A2 OrthoDB:EOG4K0QQN
NextBio:334331 Bgee:Q924A2 CleanEx:MM_CIC Genevestigator:Q924A2
GermOnline:ENSMUSG00000005442 Uniprot:Q924A2
Length = 2510
Score = 422 (153.6 bits), Expect = 1.9e-60, Sum P(2) = 1.9e-60
Identities = 76/107 (71%), Positives = 88/107 (82%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R S + G + R KD IRRPMNAFMIFSKRHRA VHQ HPNQDNRTVSKILGEWWY+
Sbjct: 1088 RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA 1147
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
LGP+EKQKYH+LA +VKEAHFKAHP+WKWC+KD++KSS+ + LG
Sbjct: 1148 LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPASLG 1194
Score = 248 (92.4 bits), Expect = 1.9e-60, Sum P(2) = 1.9e-60
Identities = 43/53 (81%), Positives = 47/53 (88%)
Query: 4 ATPHKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRHLSLK 56
A KYKKGD+V TP GIRKKFNGKQWRRLCS+DGC KESQRRGYCSRHLS++
Sbjct: 474 AAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMR 526
>UNIPROTKB|Q96RK0 [details] [associations]
symbol:CIC "Protein capicua homolog" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG12793
CTD:23152 EMBL:AF363689 EMBL:AC006486 EMBL:AB002304 IPI:IPI00045360
RefSeq:NP_055940.3 UniGene:Hs.388236 ProteinModelPortal:Q96RK0
SMR:Q96RK0 IntAct:Q96RK0 MINT:MINT-2856152 STRING:Q96RK0
PhosphoSite:Q96RK0 DMDM:116241300 PaxDb:Q96RK0 PRIDE:Q96RK0
DNASU:23152 Ensembl:ENST00000160740 GeneID:23152 KEGG:hsa:23152
UCSC:uc002otf.1 GeneCards:GC19P042772 H-InvDB:HIX0015175
H-InvDB:HIX0137483 HGNC:HGNC:14214 HPA:CAB026388 MIM:612082
neXtProt:NX_Q96RK0 PharmGKB:PA26513 HOVERGEN:HBG081174
InParanoid:Q96RK0 OMA:DGCMKES PhylomeDB:Q96RK0 ChiTaRS:CIC
GenomeRNAi:23152 NextBio:44481 Bgee:Q96RK0 CleanEx:HS_CIC
Genevestigator:Q96RK0 GermOnline:ENSG00000079432 Uniprot:Q96RK0
Length = 1608
Score = 420 (152.9 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 76/107 (71%), Positives = 88/107 (82%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R S + G + R KD IRRPMNAFMIFSKRHRA VHQ HPNQDNRTVSKILGEWWY+
Sbjct: 181 RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA 240
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
LGP+EKQKYH+LA +VKEAHFKAHP+WKWC+KD++KSS+ + LG
Sbjct: 241 LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLG 287
Score = 38 (18.4 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 320 PGGGQENKGTGP 331
PG G EN+G P
Sbjct: 1279 PGQGLENRGEPP 1290
>FB|FBgn0262582 [details] [associations]
symbol:cic "capicua" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA;NAS]
[GO:0003712 "transcription cofactor activity" evidence=NAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0007362 "terminal
region determination" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP;NAS] [GO:0001700 "embryonic development via the
syncytial blastoderm" evidence=NAS] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007474 "imaginal disc-derived wing
vein specification" evidence=IMP] [GO:0048592 "eye morphogenesis"
evidence=IMP] [GO:0030308 "negative regulation of cell growth"
evidence=IMP] [GO:0048190 "wing disc dorsal/ventral pattern
formation" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
EMBL:AE014297 GO:GO:0005634 GO:GO:0048190 GO:GO:0030308
GO:GO:0007474 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
eggNOG:NOG12793 GO:GO:0046843 GeneTree:ENSGT00530000063757
GO:GO:0007362 EMBL:AJ252268 EMBL:BT044183 EMBL:BT024235
RefSeq:NP_001097843.1 RefSeq:NP_001247204.1 RefSeq:NP_524992.1
UniGene:Dm.5727 ProteinModelPortal:Q9U1H0 SMR:Q9U1H0 DIP:DIP-23664N
IntAct:Q9U1H0 MINT:MINT-964762 STRING:Q9U1H0 PaxDb:Q9U1H0
EnsemblMetazoa:FBtr0305027 GeneID:53560 KEGG:dme:Dmel_CG43122
CTD:23152 FlyBase:FBgn0262582 InParanoid:Q9U1H0 OMA:AFQDFEL
OrthoDB:EOG43FFCP GenomeRNAi:53560 NextBio:841381 Bgee:Q9U1H0
GermOnline:CG5067 GO:GO:0048592 Uniprot:Q9U1H0
Length = 1832
Score = 410 (149.4 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 75/109 (68%), Positives = 87/109 (79%)
Query: 58 AGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
AG+A G + +IRRPMNAFMIFSK+HR VH+ HPNQDNRTVSKILGEWWY+L PE+K
Sbjct: 478 AGTAAGQPANKKIRRPMNAFMIFSKKHRKMVHKKHPNQDNRTVSKILGEWWYALKPEQKA 537
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR-GKLGSMDEGTGE 165
+YHELAS VK+AHFK HPEWKWCSKD+RKSST + G S GTG+
Sbjct: 538 QYHELASSVKDAHFKLHPEWKWCSKDRRKSSTSTATPGGKASGAAGTGD 586
Score = 45 (20.9 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 319 PPGGGQENKGTGPQTSHFKKDKDLETEP 346
P G G + + G +H K++ D++ EP
Sbjct: 797 PKGSGGKPEDAGSLQAHIKQE-DIKQEP 823
>UNIPROTKB|Q8WY36 [details] [associations]
symbol:BBX "HMG box transcription factor BBX" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AF276948 EMBL:AF276949 EMBL:AF454941 EMBL:AF454942
EMBL:AL136769 EMBL:AL834307 EMBL:BC012837 EMBL:BC110903
IPI:IPI00183699 IPI:IPI00300222 RefSeq:NP_001136040.1
RefSeq:NP_064620.2 UniGene:Hs.124366 ProteinModelPortal:Q8WY36
SMR:Q8WY36 IntAct:Q8WY36 STRING:Q8WY36 PhosphoSite:Q8WY36
DMDM:74724044 PaxDb:Q8WY36 PRIDE:Q8WY36 DNASU:56987
Ensembl:ENST00000325805 Ensembl:ENST00000406780
Ensembl:ENST00000415149 GeneID:56987 KEGG:hsa:56987 UCSC:uc003dwk.4
UCSC:uc010hpr.3 CTD:56987 GeneCards:GC03P107241 HGNC:HGNC:14422
neXtProt:NX_Q8WY36 PharmGKB:PA25280 eggNOG:NOG305473
HOVERGEN:HBG079777 InParanoid:Q8WY36 OMA:FQFAEIS PhylomeDB:Q8WY36
ChiTaRS:BBX GenomeRNAi:56987 NextBio:62675 ArrayExpress:Q8WY36
Bgee:Q8WY36 CleanEx:HS_BBX Genevestigator:Q8WY36
GermOnline:ENSG00000114439 InterPro:IPR019102 Pfam:PF09667
Uniprot:Q8WY36
Length = 941
Score = 243 (90.6 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 45/85 (52%), Positives = 58/85 (68%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ R RRPMNAF++F KRHR+ V Q HP DNR +KIL +WW L P+EKQKY ++A E
Sbjct: 77 EQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEY 136
Query: 127 KEAHFKAHPEWKWCSKDKR--KSST 149
K+A KA+P +KWC + KS T
Sbjct: 137 KDAFMKANPGYKWCPTTNKPVKSPT 161
Score = 43 (20.2 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 305 NVP--YQRSHEMDTSEPPGGGQENKGTGPQTSHFKKDKDLETEP 346
N+P + T EP G Q+ K + +H + D P
Sbjct: 802 NIPSIFNTPEPTTTQEPLVGSQKRKARKTKITHLVRTADGRVSP 845
>MGI|MGI:1917758 [details] [associations]
symbol:Bbx "bobby sox homolog (Drosophila)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060348 "bone development"
evidence=IMP] InterPro:IPR009071 MGI:MGI:1917758 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
CTD:56987 eggNOG:NOG305473 HOVERGEN:HBG079777 OMA:FQFAEIS
InterPro:IPR019102 Pfam:PF09667 EMBL:AF454943 EMBL:AF454944
EMBL:AK017487 EMBL:AK029532 EMBL:AK029747 EMBL:AK049516
EMBL:AK050488 EMBL:AK157813 EMBL:CT571273 EMBL:AC109627
EMBL:BC057869 EMBL:BC066821 EMBL:AF276950 EMBL:AF276951
EMBL:AF276952 IPI:IPI00625898 IPI:IPI00626888 IPI:IPI00757307
IPI:IPI00757891 RefSeq:NP_081720.2 UniGene:Mm.28940 PDB:1WZ6
PDBsum:1WZ6 ProteinModelPortal:Q8VBW5 SMR:Q8VBW5 STRING:Q8VBW5
PhosphoSite:Q8VBW5 PRIDE:Q8VBW5 Ensembl:ENSMUST00000066037
Ensembl:ENSMUST00000089399 Ensembl:ENSMUST00000089404
Ensembl:ENSMUST00000114488 Ensembl:ENSMUST00000138166 GeneID:70508
KEGG:mmu:70508 UCSC:uc007zkn.2 UCSC:uc007zkp.2 UCSC:uc007zkq.2
UCSC:uc007zkr.2 GeneTree:ENSGT00530000063757 InParanoid:Q8VBW5
EvolutionaryTrace:Q8VBW5 NextBio:331763 Bgee:Q8VBW5 CleanEx:MM_BBX
Genevestigator:Q8VBW5 GermOnline:ENSMUSG00000022641 Uniprot:Q8VBW5
Length = 907
Score = 240 (89.5 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
Identities = 44/85 (51%), Positives = 58/85 (68%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ R RRPMNAF++F KRHR+ V Q HP DNR +KIL +WW L P+EKQKY ++A E
Sbjct: 77 EQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEY 136
Query: 127 KEAHFKAHPEWKWCSKDKR--KSST 149
K+A KA+P ++WC + KS T
Sbjct: 137 KDAFMKANPGYRWCPTTNKPVKSPT 161
Score = 37 (18.1 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 304 PNVPYQRSHEMDTSEPPGGGQENKGTGPQTSHFKKDKDLETEP 346
PN P + + EP G Q+ K + +H + D P
Sbjct: 774 PNTPEPTTMQ----EPLVGSQKRKARKTKITHLVRTADGRVSP 812
>WB|WBGene00004950 [details] [associations]
symbol:sox-3 species:6239 "Caenorhabditis elegans"
[GO:0003690 "double-stranded DNA binding" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003690
GeneTree:ENSGT00690000101940 EMBL:Z69792 HSSP:P48432
eggNOG:NOG302715 KO:K09267 PIR:T22022 RefSeq:NP_510439.1
UniGene:Cel.1041 ProteinModelPortal:Q20201 SMR:Q20201
EnsemblMetazoa:F40E10.2 GeneID:185534 KEGG:cel:CELE_F40E10.2
UCSC:F40E10.2 CTD:185534 WormBase:F40E10.2 HOGENOM:HOG000018340
InParanoid:Q20201 OMA:KTSYDED NextBio:928610 Uniprot:Q20201
Length = 212
Score = 182 (69.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 42/117 (35%), Positives = 64/117 (54%)
Query: 33 LCSKDGCSKESQRRGYCSRHLSLKGAGSATGLR-SKDRIRRPMNAFMIFSKRHRAKVHQI 91
LC++ +K S S L GS L+ S D ++RPMNAFM++S+ R K+ Q
Sbjct: 12 LCTE--AAKTSYDEDTTSVSSGLSPPGSPVDLQNSLDHVKRPMNAFMVWSRGQRRKMAQD 69
Query: 92 HPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSS 148
+P N +SK LG W L +EK+ + + A ++ H K HP++K+ + K KSS
Sbjct: 70 NPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSS 126
Score = 41 (19.5 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 197 TGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQSNIEMQNASVAAAN 247
T LS YS+ FQ P+ S G+ P ++Q+ A+VAAA+
Sbjct: 158 THDLSQYYSSFFQSPVLS---GSTYAPYNMMAAYARQA------AAVAAAS 199
>UNIPROTKB|B4DWU7 [details] [associations]
symbol:SOX15 "Protein SOX-15" species:9606 "Homo sapiens"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
evidence=IEA] [GO:0045843 "negative regulation of striated muscle
tissue development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048627 "myoblast development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003682 GO:GO:0045843 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0043403 EMBL:AC016876 GO:GO:0048627 IPI:IPI00028451
HGNC:HGNC:11196 HOVERGEN:HBG055512 EMBL:AK301687 SMR:B4DWU7
STRING:B4DWU7 Ensembl:ENST00000570788 Uniprot:B4DWU7
Length = 178
Score = 183 (69.5 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 56 KGAGS--ATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
+GAGS A G ++++RPMNAFM++S R ++ Q +P N +SK LG W L
Sbjct: 33 EGAGSPAAPGTLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDE 92
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSS------TGSGRGKLGSMDEGTGEGF 167
+EK+ + E A ++ H + +P++K+ + K KSS G GRG L S G G+
Sbjct: 93 DEKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSGAGPSRCGQGRGNLASGGPLWGPGY 152
>UNIPROTKB|O60248 [details] [associations]
symbol:SOX15 "Protein SOX-15" species:9606 "Homo sapiens"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043403 "skeletal muscle tissue
regeneration" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0006325 "chromatin
organization" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008584 "male gonad development" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0014718 "positive
regulation of satellite cell activation involved in skeletal muscle
regeneration" evidence=ISS] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=ISS] [GO:0048627
"myoblast development" evidence=ISS] [GO:2000288 "positive
regulation of myoblast proliferation" evidence=ISS] [GO:0030154
"cell differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0070318 "positive regulation of G0 to G1
transition" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 EMBL:CH471108 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 GO:GO:0008584
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006325 GO:GO:0014718
GO:GO:0070318 GO:GO:0043403 GO:GO:2000288 GO:GO:0048627
CleanEx:HS_SOX12 HOGENOM:HOG000231647 CTD:6665 EMBL:AB006867
EMBL:BC000985 EMBL:BC072003 EMBL:X73039 EMBL:AJ006222 EMBL:AB025355
IPI:IPI00028451 PIR:S34119 RefSeq:NP_008873.1 UniGene:Hs.95582
ProteinModelPortal:O60248 SMR:O60248 STRING:O60248
PhosphoSite:O60248 PRIDE:O60248 DNASU:6665 Ensembl:ENST00000250055
Ensembl:ENST00000538513 GeneID:6665 KEGG:hsa:6665 UCSC:uc002ghy.1
GeneCards:GC17M007491 HGNC:HGNC:11196 MIM:601297 neXtProt:NX_O60248
PharmGKB:PA36033 eggNOG:NOG311451 HOVERGEN:HBG055512
InParanoid:O60248 KO:K09271 OMA:PQSDPRL OrthoDB:EOG40K80Q
PhylomeDB:O60248 GenomeRNAi:6665 NextBio:25987 ArrayExpress:O60248
Bgee:O60248 CleanEx:HS_SOX15 Genevestigator:O60248
GermOnline:ENSG00000129194 Uniprot:O60248
Length = 233
Score = 183 (69.5 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 56 KGAGS--ATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
+GAGS A G ++++RPMNAFM++S R ++ Q +P N +SK LG W L
Sbjct: 33 EGAGSPAAPGTLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDE 92
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSS------TGSGRGKLGSMDEGTGEGF 167
+EK+ + E A ++ H + +P++K+ + K KSS G GRG L S G G+
Sbjct: 93 DEKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSGAGPSRCGQGRGNLASGGPLWGPGY 152
>UNIPROTKB|F1ST29 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048627 "myoblast development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 KO:K09271 OMA:PQSDPRL EMBL:CU914279
RefSeq:XP_003131994.1 UniGene:Ssc.61757 Ensembl:ENSSSCT00000019538
GeneID:100522397 KEGG:ssc:100522397 Uniprot:F1ST29
Length = 233
Score = 183 (69.5 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 39/113 (34%), Positives = 64/113 (56%)
Query: 56 KGAGS--ATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
+GAGS +G ++++RPMNAFM++S R ++ Q +P N +SK LG W LG
Sbjct: 33 EGAGSPVVSGGLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGE 92
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEG 166
+EK+ + E A ++ H + +P++K+ + K K+S G+G G G G
Sbjct: 93 DEKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKTS-GAGSAHFGQGSSGVAGG 144
>UNIPROTKB|A6PVD3 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9606
"Homo sapiens" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007422 "peripheral nervous system development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0014015 "positive regulation of gliogenesis" evidence=IEA]
[GO:0030318 "melanocyte differentiation" evidence=IEA] [GO:0031315
"extrinsic to mitochondrial outer membrane" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048546 "digestive
tract morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0048863 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0048709 GO:GO:0031315
GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
EMBL:AL031587 GO:GO:0014015 HOVERGEN:HBG002061 InterPro:IPR022151
Pfam:PF12444 UniGene:Hs.376984 HGNC:HGNC:11190 IPI:IPI00908479
SMR:A6PVD3 STRING:A6PVD3 Ensembl:ENST00000427770 UCSC:uc010gxj.3
HOGENOM:HOG000070122 Uniprot:A6PVD3
Length = 213
Score = 157 (60.3 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 30/100 (30%), Positives = 56/100 (56%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 99 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 158
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEG 162
++ H K HP++K+ + ++ G + G ++G
Sbjct: 159 RLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEAEQG 198
Score = 45 (20.9 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 317 SEPPGGGQENKGTGPQTSHFK 337
+E PGG E GT +H+K
Sbjct: 188 AECPGGEAEQGGTAAIQAHYK 208
>UNIPROTKB|E2R3H4 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048627
"myoblast development" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045843 "negative regulation of striated muscle
tissue development" evidence=IEA] [GO:0043403 "skeletal muscle
tissue regeneration" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 CTD:6665 KO:K09271 OMA:PQSDPRL
EMBL:AAEX03003621 RefSeq:XP_003434661.1 ProteinModelPortal:E2R3H4
Ensembl:ENSCAFT00000026387 GeneID:100688349 KEGG:cfa:100688349
Uniprot:E2R3H4
Length = 233
Score = 181 (68.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 40/113 (35%), Positives = 63/113 (55%)
Query: 56 KGAGS--ATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
+GAGS G ++++RPMNAFM++S R ++ Q +P N +SK LG W LG
Sbjct: 33 EGAGSPGVPGALPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGE 92
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEG 166
+EK+ + E A ++ H + +P++K+ + K KSS G+G G G G
Sbjct: 93 DEKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSS-GAGPPHFGQGGGGVAGG 144
>FB|FBgn0024251 [details] [associations]
symbol:bbx "bobby sox" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 EMBL:AE014298 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:56987 eggNOG:NOG305473
GeneTree:ENSGT00530000063757 EMBL:AF017777 UniGene:Dm.2637
HOGENOM:HOG000219040 EMBL:AY094952 PIR:T08431 RefSeq:NP_001027087.1
RefSeq:NP_001027088.1 HSSP:Q05066 SMR:O61348 DIP:DIP-18948N
MINT:MINT-750571 STRING:O61348 EnsemblMetazoa:FBtr0100598
EnsemblMetazoa:FBtr0100599 EnsemblMetazoa:FBtr0331744
EnsemblMetazoa:FBtr0331745 GeneID:3772670 KEGG:dme:Dmel_CG1414
UCSC:CG1414-RB FlyBase:FBgn0024251 InParanoid:O61348 OMA:WWAALDE
OrthoDB:EOG42Z359 NextBio:854600 Uniprot:O61348
Length = 769
Score = 201 (75.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 60 SATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKY 119
+A R + RRPMNAF+IF KRHR V + + +NR ++KILG+WW +L +EK +
Sbjct: 287 TADNTRPEHHARRPMNAFLIFCKRHRGIVKERYKTLENRAITKILGDWWAALDEQEKHCF 346
Query: 120 HELASEVKEAHFKAHPEWKW 139
+LA + K+A F A+P +KW
Sbjct: 347 TDLAQQNKDAFFNANPNFKW 366
>MGI|MGI:98363 [details] [associations]
symbol:Sox15 "SRY-box containing gene 15" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IGI;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030154
"cell differentiation" evidence=IGI] [GO:0043403 "skeletal muscle
tissue regeneration" evidence=IMP] [GO:0045843 "negative regulation
of striated muscle tissue development" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0048627 "myoblast development"
evidence=IMP] InterPro:IPR009071 MGI:MGI:98363 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014718
GO:GO:0070318 GO:GO:0043403 GO:GO:2000288 GO:GO:0048627 CTD:6665
eggNOG:NOG311451 HOVERGEN:HBG055512 KO:K09271 OMA:PQSDPRL
OrthoDB:EOG40K80Q EMBL:AB014474 EMBL:AF182945 EMBL:AB039214
EMBL:AB039215 EMBL:AB039216 EMBL:AB039217 EMBL:AB039218
EMBL:AB039219 EMBL:AB039220 EMBL:AB039221 EMBL:AB039222 EMBL:U70443
EMBL:X70909 EMBL:X98369 IPI:IPI00118219 PIR:S33715
RefSeq:NP_033261.1 UniGene:Mm.347499 ProteinModelPortal:P43267
SMR:P43267 MINT:MINT-4788454 STRING:P43267 PhosphoSite:P43267
PRIDE:P43267 Ensembl:ENSMUST00000047373 GeneID:20670 KEGG:mmu:20670
InParanoid:P43267 NextBio:299147 Bgee:P43267 CleanEx:MM_SOX15
Genevestigator:P43267 GermOnline:ENSMUSG00000041287 Uniprot:P43267
Length = 231
Score = 177 (67.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 37/96 (38%), Positives = 59/96 (61%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G+ A+G ++++RPMNAFM++S R ++ Q +P N +SK LG W LG EEK
Sbjct: 34 GSPGASGGLPLEKVKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEK 93
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRK-SSTGS 151
+ + E A ++ H + +P++K+ + K K SSTGS
Sbjct: 94 RPFVEEAKRLRARHLRDYPDYKYRPRRKSKNSSTGS 129
>UNIPROTKB|E1B9L6 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048627 "myoblast development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 CTD:6665 KO:K09271 OMA:PQSDPRL
EMBL:DAAA02048793 IPI:IPI00703496 RefSeq:NP_001179004.1
UniGene:Bt.15965 Ensembl:ENSBTAT00000007184 GeneID:505878
KEGG:bta:505878 NextBio:20867356 Uniprot:E1B9L6
Length = 233
Score = 172 (65.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 56 KGAGSATGLRSK--DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
+GAGS R ++++RPMNAFM++S R ++ Q +P N +SK LG W LG
Sbjct: 33 EGAGSPVVSRGLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGE 92
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEG 166
+EK+ + E A ++ H + +P++K+ + K KS+ G+G G G
Sbjct: 93 DEKRPFVEEAKRLRARHLRDYPDYKYRPRRKSKSA-GAGSPHFSQGSGGVAGG 144
>UNIPROTKB|F1S992 [details] [associations]
symbol:SOX-6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101789 PANTHER:PTHR10270:SF89 EMBL:CU462935
EMBL:CU576535 Ensembl:ENSSSCT00000014619 ArrayExpress:F1S992
Uniprot:F1S992
Length = 247
Score = 178 (67.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 36 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQAR 95
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ + H + +P +K+ + KR + ++G
Sbjct: 96 LSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIG 127
>RGD|1309072 [details] [associations]
symbol:Sox8 "SRY (sex determining region Y)-box 8" species:10116
"Rattus norvegicus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=ISO;ISS] [GO:0001649
"osteoblast differentiation" evidence=ISO;ISS] [GO:0001701 "in
utero embryonic development" evidence=ISO;ISS] [GO:0001755 "neural
crest cell migration" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007165 "signal transduction" evidence=ISO;ISS] [GO:0007283
"spermatogenesis" evidence=ISO;ISS] [GO:0007422 "peripheral nervous
system development" evidence=ISO;ISS] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008584 "male gonad development" evidence=ISO;ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0010817 "regulation of hormone levels" evidence=ISO;ISS]
[GO:0014015 "positive regulation of gliogenesis" evidence=ISO;ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISO;ISS] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO;ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISO] [GO:0045165 "cell fate commitment"
evidence=ISO;ISS] [GO:0045444 "fat cell differentiation"
evidence=ISO;ISS] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISO;ISS] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046533
"negative regulation of photoreceptor cell differentiation"
evidence=IEA;ISO] [GO:0048469 "cell maturation" evidence=IEA;ISO]
[GO:0048484 "enteric nervous system development" evidence=ISO;ISS]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISO;ISS]
[GO:0060009 "Sertoli cell development" evidence=ISO;ISS]
[GO:0060018 "astrocyte fate commitment" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye"
evidence=ISO;ISS] [GO:0060221 "retinal rod cell differentiation"
evidence=ISO;ISS] [GO:0060612 "adipose tissue development"
evidence=ISO;ISS] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=ISO;ISS] [GO:0072034 "renal vesicle induction"
evidence=ISO;ISS] [GO:0072197 "ureter morphogenesis"
evidence=ISO;ISS] [GO:0072289 "metanephric nephron tubule
formation" evidence=ISO;ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISO;ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISO;ISS] InterPro:IPR009071 Pfam:PF00505 RGD:1309072
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0007165
GO:GO:0045893 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0060612 GO:GO:0003700
GO:GO:0007283 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0060009 GO:GO:0090190 GO:GO:0001649
GO:GO:0045444 GO:GO:0000979 EMBL:CH473948 GO:GO:0048709
GO:GO:0048484 GO:GO:0010817 GO:GO:0048469 GO:GO:0033690
GO:GO:0045662 GO:GO:0046533 GO:GO:0060018 GO:GO:0014015
GO:GO:0072289 GO:GO:0072197 GeneTree:ENSGT00670000097649 KO:K09270
InterPro:IPR022151 Pfam:PF12444 CTD:30812 OrthoDB:EOG4ZKJMD
OMA:DQSHGSP GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
IPI:IPI00368755 RefSeq:NP_001100459.1 UniGene:Rn.141194
Ensembl:ENSRNOT00000025494 GeneID:302993 KEGG:rno:302993
UCSC:RGD:1309072 NextBio:650512 Uniprot:D3ZR96
Length = 463
Score = 188 (71.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 43/136 (31%), Positives = 74/136 (54%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHP 93
C +D S+ + + + ++G G T L++K ++RPMNAFM++++ R K+ +P
Sbjct: 64 CIRDAVSQVLKGYDWSLVPMPVRGGGGGT-LKAKPHVKRPMNAFMVWAQAARRKLADQYP 122
Query: 94 NQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
+ N +SK LG+ W L EK+ + E A ++ H K HP++K+ + +R+ S +GR
Sbjct: 123 HLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY--QPRRRKSVKTGR 180
Query: 154 GKLGSMDEGTGEGFMP 169
D GT G P
Sbjct: 181 S---DSDSGTELGHHP 193
Score = 41 (19.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 228 VIVSKQSNIEMQNASVAAANAELMQQADKNKDSEQQKYRNFN 269
++ S + NI+ N ++ ++E++ D E +Y N
Sbjct: 249 LVDSGRQNIDFSNVDISELSSEVISNMDTFDVHEFDQYLPLN 290
>MGI|MGI:98370 [details] [associations]
symbol:Sox8 "SRY-box containing gene 8" species:10090 "Mus
musculus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0001649
"osteoblast differentiation" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IGI] [GO:0001755 "neural crest cell
migration" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IMP;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IGI;IMP] [GO:0007422 "peripheral nervous system
development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008584 "male gonad development"
evidence=IGI] [GO:0010628 "positive regulation of gene expression"
evidence=IGI] [GO:0010817 "regulation of hormone levels"
evidence=IMP] [GO:0014015 "positive regulation of gliogenesis"
evidence=IMP] [GO:0033690 "positive regulation of osteoblast
proliferation" evidence=IMP] [GO:0035914 "skeletal muscle cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045444 "fat cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA;IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048469 "cell
maturation" evidence=IGI;IMP] [GO:0048484 "enteric nervous system
development" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0060009 "Sertoli cell
development" evidence=IGI] [GO:0060018 "astrocyte fate commitment"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] [GO:0060221 "retinal rod cell differentiation"
evidence=IGI] [GO:0060612 "adipose tissue development"
evidence=IMP] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=IGI] [GO:0072034 "renal vesicle induction" evidence=IMP]
[GO:0072197 "ureter morphogenesis" evidence=IGI] [GO:0072289
"metanephric nephron tubule formation" evidence=IGI] [GO:0090184
"positive regulation of kidney development" evidence=IGI]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=IMP] InterPro:IPR009071 MGI:MGI:98370
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0007165 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0060612 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060009 GO:GO:0090190
GO:GO:0001649 GO:GO:0045444 GO:GO:0035914 GO:GO:0000979
GO:GO:0048709 GO:GO:0048484 GO:GO:0010817 GO:GO:0048469
GO:GO:0033690 GO:GO:0045662 GO:GO:0046533 GO:GO:0060018
GO:GO:0014015 GO:GO:0072289 GO:GO:0072197 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
CTD:30812 eggNOG:NOG324597 OrthoDB:EOG4ZKJMD OMA:DQSHGSP
ChiTaRS:SOX8 GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
EMBL:AF191325 EMBL:BC085619 EMBL:Z18957 IPI:IPI00111141 PIR:S30246
RefSeq:NP_035577.1 UniGene:Mm.258220 ProteinModelPortal:Q04886
SMR:Q04886 IntAct:Q04886 STRING:Q04886 PhosphoSite:Q04886
PRIDE:Q04886 Ensembl:ENSMUST00000025003 GeneID:20681 KEGG:mmu:20681
InParanoid:Q04886 NextBio:299189 Bgee:Q04886 CleanEx:MM_SOX8
Genevestigator:Q04886 GermOnline:ENSMUSG00000024176 Uniprot:Q04886
Length = 464
Score = 188 (71.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 43/136 (31%), Positives = 74/136 (54%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHP 93
C +D S+ + + + ++G G T L++K ++RPMNAFM++++ R K+ +P
Sbjct: 64 CIRDAVSQVLKGYDWSLVPMPVRGGGGGT-LKAKPHVKRPMNAFMVWAQAARRKLADQYP 122
Query: 94 NQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
+ N +SK LG+ W L EK+ + E A ++ H K HP++K+ + +R+ S +GR
Sbjct: 123 HLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY--QPRRRKSVKTGR 180
Query: 154 GKLGSMDEGTGEGFMP 169
D GT G P
Sbjct: 181 S---DSDSGTELGHHP 193
Score = 41 (19.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 228 VIVSKQSNIEMQNASVAAANAELMQQADKNKDSEQQKYRNFN 269
++ S + NI+ N ++ ++E++ D E +Y N
Sbjct: 250 LVDSGRQNIDFSNVDISELSSEVISNMDTFDVHEFDQYLPLN 291
>MGI|MGI:894659 [details] [associations]
symbol:Hbp1 "high mobility group box transcription factor 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0043268 "positive regulation of potassium ion
transport" evidence=ISO] InterPro:IPR009071 InterPro:IPR003652
InterPro:IPR013723 Pfam:PF08517 PROSITE:PS51148 SMART:SM00536
MGI:MGI:894659 Pfam:PF00505 GO:GO:0005634 GO:GO:0006355
GO:GO:0016055 GO:GO:0003677 GO:GO:0006351 GO:GO:0003723
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
SUPFAM:SSF102031 eggNOG:NOG149693 HOGENOM:HOG000065753
HOVERGEN:HBG052810 CTD:26959 OrthoDB:EOG4KKZ36 EMBL:BC026853
EMBL:AK028674 EMBL:AK082770 EMBL:AK133127 IPI:IPI00988685
IPI:IPI00988992 RefSeq:NP_694878.2 RefSeq:NP_818774.2
UniGene:Mm.390461 UniGene:Mm.458534 PDB:1S5R PDB:1V06 PDBsum:1S5R
PDBsum:1V06 ProteinModelPortal:Q8R316 SMR:Q8R316 STRING:Q8R316
PhosphoSite:Q8R316 PRIDE:Q8R316 GeneID:73389 KEGG:mmu:73389
UCSC:uc007nhu.2 UCSC:uc007nhv.2 InParanoid:Q8R316
EvolutionaryTrace:Q8R316 NextBio:338141 Bgee:Q8R316 CleanEx:MM_HBP1
Genevestigator:Q8R316 GermOnline:ENSMUSG00000002996 Uniprot:Q8R316
Length = 516
Score = 191 (72.3 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 47/133 (35%), Positives = 75/133 (56%)
Query: 20 GIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRHLS-LKGAGSATGLRSKDRIRRPMNAFM 78
G ++F+G ++ + C G S+ S Y S G SAT S ++ +RPMNAFM
Sbjct: 388 GTGQEFSGSEFSKSCGSPGSSQLSSSSLYAKAVKSHSSGTVSAT---SPNKCKRPMNAFM 444
Query: 79 IFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK 138
+F+K++R + Q++P +DNR +S ILG+ W + EE++ Y A + E + +P+
Sbjct: 445 LFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPD-- 502
Query: 139 WCSKDKRKSSTGS 151
C K KR +S GS
Sbjct: 503 -CWKRKRTNS-GS 513
>FB|FBgn0029123 [details] [associations]
symbol:SoxN "SoxNeuro" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0030111 "regulation of Wnt receptor signaling pathway"
evidence=IMP] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0007411 EMBL:AE014134 GO:GO:0030111 GO:GO:0045944
GO:GO:0007417 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031490
GeneTree:ENSGT00690000101940 ChiTaRS:QSOX2 HSSP:P48432 KO:K09267
FlyBase:FBgn0029123 EMBL:BT001514 RefSeq:NP_524735.1
UniGene:Dm.3272 SMR:Q9VLH8 STRING:Q9VLH8 EnsemblMetazoa:FBtr0079733
GeneID:44275 KEGG:dme:Dmel_CG18024 UCSC:CG18024-RA CTD:44275
InParanoid:Q9VLH8 OMA:HMSAHIA GenomeRNAi:44275 NextBio:837102
Uniprot:Q9VLH8
Length = 572
Score = 169 (64.5 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 60 SATGLRSK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
SAT +++ DR++RPMNAFM++S+ R K+ +P N +SK LG W L EK
Sbjct: 166 SATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEK 225
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K HP++K+ + K K+ T
Sbjct: 226 RPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLT 258
Score = 54 (24.1 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 302 GAPNVPYQRS---HEMDTSEPPGGGQENKGTGPQTSHFKKDKDLETEPMAKS 350
G+P+ PY S + + P GGG G SH D +++EP++ S
Sbjct: 396 GSPS-PYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSSIKSEPVSPS 446
Score = 47 (21.6 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 204 YSTGFQIPISSESLGNVKQPTTPTVIVSKQSNIEMQNASVAAANAELMQQADKNKDSEQQ 263
Y G +P + G +P TPT + + + N S +A A A + + Q
Sbjct: 264 YPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQARQD 323
Query: 264 KYR 266
Y+
Sbjct: 324 MYQ 326
>UNIPROTKB|P48433 [details] [associations]
symbol:SOX3 "Transcription factor SOX-3" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=ISS] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISS] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IMP] [GO:0060324
"face development" evidence=ISS] [GO:0007423 "sensory organ
development" evidence=ISS] [GO:0021983 "pituitary gland
development" evidence=ISS] [GO:0021854 "hypothalamus development"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007423 GO:GO:0045665
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 UniGene:Gga.3795 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:U12467 IPI:IPI00586970 PIR:I50705
ProteinModelPortal:P48433 SMR:P48433 Uniprot:P48433
Length = 312
Score = 184 (69.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 41/107 (38%), Positives = 65/107 (60%)
Query: 46 RGYCSRHLSLK--GAGSATGLRS-KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSK 102
RG +R + K GA +A G RS +DR++RPMNAFM++S+ R K+ Q +P N +SK
Sbjct: 19 RGEPARAATAKVGGAAAADGCRSDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISK 78
Query: 103 ILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
LG W L EK+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 79 RLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKY--RPRRKTKT 123
>RGD|620444 [details] [associations]
symbol:Hbp1 "HMG-box transcription factor 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0043268 "positive regulation of
potassium ion transport" evidence=IDA] InterPro:IPR009071
InterPro:IPR003652 InterPro:IPR013723 Pfam:PF08517 PROSITE:PS51148
SMART:SM00536 Pfam:PF00505 RGD:620444 GO:GO:0005634 GO:GO:0006355
GO:GO:0016055 GO:GO:0003677 GO:GO:0043268 GO:GO:0006351
GO:GO:0003723 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 SUPFAM:SSF102031 eggNOG:NOG149693
HOGENOM:HOG000065753 HOVERGEN:HBG052810 CTD:26959 OMA:CCEIHIG
OrthoDB:EOG4KKZ36 EMBL:U09551 EMBL:BC091165 IPI:IPI00207138
PIR:I58311 RefSeq:NP_037353.2 UniGene:Rn.89226
ProteinModelPortal:Q62661 SMR:Q62661 STRING:Q62661
PhosphoSite:Q62661 PRIDE:Q62661 Ensembl:ENSRNOT00000012004
GeneID:27080 KEGG:rno:27080 GeneTree:ENSGT00390000011239
InParanoid:Q62661 NextBio:608045 Genevestigator:Q62661
GermOnline:ENSRNOG00000008927 Uniprot:Q62661
Length = 513
Score = 187 (70.9 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 47/133 (35%), Positives = 74/133 (55%)
Query: 20 GIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRHLS-LKGAGSATGLRSKDRIRRPMNAFM 78
G ++F G ++ + C G S+ S Y S G SAT S ++ +RPMNAFM
Sbjct: 385 GTGQEFAGSEFSKSCGSPGSSQLSSSSLYTKAVKSHSSGTVSAT---SPNKCKRPMNAFM 441
Query: 79 IFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK 138
+F+K++R + Q++P +DNR +S ILG+ W + EE++ Y A + E + +P+
Sbjct: 442 LFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPD-- 499
Query: 139 WCSKDKRKSSTGS 151
C K KR +S GS
Sbjct: 500 -CWKRKRTNS-GS 510
>UNIPROTKB|Q9PSV6 [details] [associations]
symbol:Sox3 "SOX3" species:9031 "Gallus gallus" [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0007530 "sex determination"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0021854 "hypothalamus development" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0048515 "spermatid
differentiation" evidence=IEA] [GO:0060009 "Sertoli cell
development" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000979
GO:GO:0001106 UniGene:Gga.3795 GeneTree:ENSGT00690000101940
HSSP:P48432 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658 OMA:AQSYMNV
EMBL:AADN02013475 EMBL:AB011803 EMBL:AB753847 IPI:IPI00820761
RefSeq:NP_989526.1 SMR:Q9PSV6 STRING:Q9PSV6
Ensembl:ENSGALT00000011718 GeneID:374019 KEGG:gga:374019
InParanoid:Q9PSV6 NextBio:20813546 Uniprot:Q9PSV6
Length = 316
Score = 180 (68.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/94 (39%), Positives = 58/94 (61%)
Query: 57 GAGSATGLRS-KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
GAGS G S +DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L E
Sbjct: 34 GAGSGAGAGSDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAE 93
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
K+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 94 KRPFIDEAKRLRAVHMKEYPDYKY--RPRRKTKT 125
>UNIPROTKB|E2R0K1 [details] [associations]
symbol:SOX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072197 "ureter morphogenesis" evidence=ISS]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048484 "enteric nervous system
development" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0014015 "positive regulation
of gliogenesis" evidence=ISS] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0001755
"neural crest cell migration" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0061138
"morphogenesis of a branching epithelium" evidence=ISS] [GO:0060612
"adipose tissue development" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060041 "retina development
in camera-type eye" evidence=ISS] [GO:0060009 "Sertoli cell
development" evidence=ISS] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=ISS] [GO:0045165 "cell fate
commitment" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=ISS] [GO:0010817 "regulation of hormone levels"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0007422 "peripheral nervous system development" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0001701 "in utero
embryonic development" evidence=ISS] [GO:0001649 "osteoblast
differentiation" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0090184
"positive regulation of kidney development" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0060018
"astrocyte fate commitment" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0045893
GO:GO:0043066 GO:GO:0001755 GO:GO:0001701 GO:GO:0045944
GO:GO:0007422 GO:GO:0060612 GO:GO:0003700 GO:GO:0007283
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060009 GO:GO:0090190 GO:GO:0001649 GO:GO:0045444
GO:GO:0000979 GO:GO:0048709 GO:GO:0048484 GO:GO:0010817
GO:GO:0048469 GO:GO:0033690 GO:GO:0045662 GO:GO:0046533
GO:GO:0060018 GO:GO:0014015 GO:GO:0072289 GO:GO:0072197
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:0061138 GO:GO:0072034 GO:GO:0060221 EMBL:AAEX03004665
EMBL:AAEX03004666 Ensembl:ENSCAFT00000031157 Uniprot:E2R0K1
Length = 462
Score = 184 (69.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 38/125 (30%), Positives = 69/125 (55%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHP 93
C +D S+ + + + ++G G T L++K ++RPMNAFM++++ R K+ +P
Sbjct: 67 CIRDAVSQVLKGYDWSLVPMPVRGGGGGT-LKAKPHVKRPMNAFMVWAQAARRKLADQYP 125
Query: 94 NQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
+ N +SK LG+ W L EK+ + E A ++ H K HP++K+ + ++ TG G
Sbjct: 126 HLHNAELSKTLGKLWGLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKTGQGD 185
Query: 154 GKLGS 158
G+
Sbjct: 186 SDSGA 190
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 231 SKQSNIEMQNASVAAANAELMQQADKNKDSEQQKYRNFN 269
S + NI+ N ++ ++E++ D E +Y N
Sbjct: 252 SGRQNIDFSNVDISELSSEVIGNMDTFDVHEFDQYLPLN 290
>UNIPROTKB|Q5JRY4 [details] [associations]
symbol:TCF7L2 "Transcription factor 7-like 2" species:9606
"Homo sapiens" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 HOGENOM:HOG000116032 HOVERGEN:HBG000419
PANTHER:PTHR10373 EMBL:AL135792 EMBL:AL158212 EMBL:AL445486
EMBL:AL451084 UniGene:Hs.593995 HGNC:HGNC:11641 ChiTaRS:TCF7L2
IPI:IPI00944473 SMR:Q5JRY4 Ensembl:ENST00000369389 Uniprot:Q5JRY4
Length = 176
Score = 161 (61.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 32 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 91
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 92 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 147
>UNIPROTKB|Q5JRY5 [details] [associations]
symbol:TCF7L2 "Transcription factor 7-like 2" species:9606
"Homo sapiens" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 HOGENOM:HOG000116032 HOVERGEN:HBG000419
PANTHER:PTHR10373 EMBL:AL135792 EMBL:AL158212 EMBL:AL445486
EMBL:AL451084 UniGene:Hs.593995 HGNC:HGNC:11641 ChiTaRS:TCF7L2
SMR:Q5JRY5 Ensembl:ENST00000277945 Uniprot:Q5JRY5
Length = 207
Score = 161 (61.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 38 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 97
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 98 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 153
>UNIPROTKB|F1S3U8 [details] [associations]
symbol:SOX13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
OMA:TMVNCTV EMBL:CU972366 Ensembl:ENSSSCT00000016646 Uniprot:F1S3U8
Length = 545
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 39/121 (32%), Positives = 64/121 (52%)
Query: 38 GCSKESQRRGY-CSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQD 96
GC + + GY S + R+ I+RPMNAFM+++K R K+ Q P+
Sbjct: 408 GCDVDGEGSGYWASGQEGPPLLPTRARSRNSSHIKRPMNAFMVWAKDERRKILQAFPDMH 467
Query: 97 NRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL 156
N ++SKILG W S+ +EKQ Y+E + + H + +P++K+ + KR R ++
Sbjct: 468 NSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRV 527
Query: 157 G 157
G
Sbjct: 528 G 528
>UNIPROTKB|Q86G49 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform b" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 HSSP:P35710 UCSC:T22B7.1c.2 HOGENOM:HOG000020384
NextBio:911168 ProteinModelPortal:Q86G49 SMR:Q86G49 STRING:Q86G49
EnsemblMetazoa:T22B7.1b.1 EnsemblMetazoa:T22B7.1b.2
WormBase:T22B7.1b ArrayExpress:Q86G49 Uniprot:Q86G49
Length = 316
Score = 177 (67.4 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+S + I+RPMNAFM++++ R K+ + +P+ N +SKILG W + EKQ Y+E S
Sbjct: 170 KSPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQS 229
Query: 125 EVKEAHFKAHPEWKWCSKDKR 145
+ + H + HP++++ + KR
Sbjct: 230 RLSKLHMEQHPDYRYRPRPKR 250
>UNIPROTKB|O57401 [details] [associations]
symbol:SOX1 "Transcription factor SOX-1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48432 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:AB011802 IPI:IPI00597708 RefSeq:NP_989664.1
UniGene:Gga.165 ProteinModelPortal:O57401 SMR:O57401 GeneID:374240
KEGG:gga:374240 CTD:6656 NextBio:20813736 Uniprot:O57401
Length = 373
Score = 179 (68.1 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G G G +DR++RPMNAFM++S+ R K+ Q +P N +SK LG W + EK
Sbjct: 35 GGGGGGGKAGQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEK 94
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 95 RPFIDEAKRLRALHMKEHPDYKY--RPRRKTKT 125
>UNIPROTKB|E1BL97 [details] [associations]
symbol:SOX13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
OMA:TMVNCTV EMBL:DAAA02041911 IPI:IPI00825051
Ensembl:ENSBTAT00000010692 Uniprot:E1BL97
Length = 622
Score = 183 (69.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
R+ I+RPMNAFM+++K R K+ Q P+ N ++SKILG W S+ +EKQ Y+E +
Sbjct: 419 RNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQA 478
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ H + +P++K+ + KR R ++G
Sbjct: 479 RLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVG 511
>UNIPROTKB|H2L0M3 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform d" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 ProteinModelPortal:H2L0M3 SMR:H2L0M3
EnsemblMetazoa:T22B7.1d WormBase:T22B7.1d Uniprot:H2L0M3
Length = 319
Score = 177 (67.4 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+S + I+RPMNAFM++++ R K+ + +P+ N +SKILG W + EKQ Y+E S
Sbjct: 173 KSPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQS 232
Query: 125 EVKEAHFKAHPEWKWCSKDKR 145
+ + H + HP++++ + KR
Sbjct: 233 RLSKLHMEQHPDYRYRPRPKR 253
>UNIPROTKB|E1BHN5 [details] [associations]
symbol:LOC614121 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043588 GO:GO:0003677 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 OMA:KPKTLMK EMBL:DAAA02034004
EMBL:DAAA02034005 IPI:IPI00694817 Ensembl:ENSBTAT00000030439
Uniprot:E1BHN5
Length = 204
Score = 160 (61.4 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D ++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A ++
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKSST 149
H K HP++K+ + +RK T
Sbjct: 66 AMHMKEHPDYKY--RPRRKPKT 85
>UNIPROTKB|H0YBC8 [details] [associations]
symbol:TCF7 "Transcription factor 7" species:9606 "Homo
sapiens" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
PANTHER:PTHR10373 HGNC:HGNC:11639 ChiTaRS:TCF7 EMBL:AC008608
EMBL:AC011336 Ensembl:ENST00000517855 Uniprot:H0YBC8
Length = 204
Score = 160 (61.4 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R+L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 39 RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 98
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEW---------KWCSKDKRKSSTGSGR 153
L EE+ KY+ELA + ++ H + +P W K S++K + ST G+
Sbjct: 99 LSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGK 150
>UNIPROTKB|F6RRS7 [details] [associations]
symbol:SOX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072091 "regulation of stem cell proliferation"
evidence=IEA] [GO:0061028 "establishment of endothelial barrier"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060836 "lymphatic endothelial cell
differentiation" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043534 "blood vessel endothelial cell migration"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001946 "lymphangiogenesis" evidence=IEA]
[GO:0001942 "hair follicle development" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0001942
GO:GO:0001946 GO:GO:0060836 GO:GO:0043534 GO:GO:0001570
GO:GO:0048469 GO:GO:0035050 GO:GO:0072091 GO:GO:0060956
GO:GO:0060214 GO:GO:0061028 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 GO:GO:0048866
OMA:YLNCSRT EMBL:DAAA02036216 EMBL:DAAA02036215 IPI:IPI00717042
Ensembl:ENSBTAT00000015485 Uniprot:F6RRS7
Length = 388
Score = 179 (68.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 53 LSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLG 112
LS G G G + RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W L
Sbjct: 68 LSPAGRGERQGT-DESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELS 126
Query: 113 PEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKS 147
P EK+ + E A ++ H + HP +K+ + K+++
Sbjct: 127 PAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQA 161
>FB|FBgn0005613 [details] [associations]
symbol:Sox15 "Sox box protein 15" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0022416 "chaeta development" evidence=IGI;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IGI] InterPro:IPR009071 Pfam:PF00505
EMBL:AE013599 GO:GO:0005634 GO:GO:0043066 GO:GO:0008285
GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0022416
GO:GO:0035220 eggNOG:NOG242943 GeneTree:ENSGT00670000097649
EMBL:AJ250955 EMBL:BT022122 EMBL:BT025204 EMBL:X65668 PIR:S22936
RefSeq:NP_523739.2 UniGene:Dm.2578 ProteinModelPortal:P40657
SMR:P40657 DIP:DIP-21090N MINT:MINT-990874 STRING:P40657
PRIDE:P40657 EnsemblMetazoa:FBtr0087576 GeneID:36575
KEGG:dme:Dmel_CG8404 CTD:6665 FlyBase:FBgn0005613 InParanoid:P40657
OMA:KESRIRR OrthoDB:EOG4MCVFC PhylomeDB:P40657 GenomeRNAi:36575
NextBio:799285 Bgee:P40657 GermOnline:CG8404 Uniprot:P40657
Length = 784
Score = 181 (68.8 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 52/166 (31%), Positives = 84/166 (50%)
Query: 47 GYCSRH------LSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
GY RH L + G+ + + RIRRPMNAFM+++K R K+ +P+ N +
Sbjct: 186 GYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADL 245
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMD 160
SK+LG+ W SL P++++ Y E A ++ H HP +K+ + +RK S KL +M
Sbjct: 246 SKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPR-RRKQS------KLRAMQ 298
Query: 161 EGTGEGFMPDDLEHFENSLEMVTSSNETTVQYLLHPTGRLSNIYST 206
G G+ E E+S T +++ + P S+ Y+T
Sbjct: 299 PG-GK-------EQSESSPNPGTGGSKSNPKLATPPLATASSSYTT 336
Score = 45 (20.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 299 MDSGAPNVPYQRSHEMDTSEPPGGGQEN-----KGTGPQTSHFKKDKDLETEPMAKS 350
++S A N P +E S P GGG +N K T P S K + E +AKS
Sbjct: 384 IESLAANCPPALLNE---SSPTGGGYDNSLLLKKLTKPSPSRAAKSRQ---EKLAKS 434
>UNIPROTKB|H0YAR8 [details] [associations]
symbol:TCF7 "Transcription factor 7" species:9606 "Homo
sapiens" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
PANTHER:PTHR10373 HGNC:HGNC:11639 ChiTaRS:TCF7 EMBL:AC008608
EMBL:AC011336 Ensembl:ENST00000517799 Bgee:H0YAR8 Uniprot:H0YAR8
Length = 147
Score = 159 (61.0 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R+L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 28 RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 87
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEWKW---CSKDKRKS 147
L EE+ KY+ELA + ++ H + +P W K KR+S
Sbjct: 88 LSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRS 127
>UNIPROTKB|O00570 [details] [associations]
symbol:SOX1 "Transcription factor SOX-1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002089 "lens
morphogenesis in camera-type eye" evidence=IEA] [GO:0021521
"ventral spinal cord interneuron specification" evidence=IEA]
[GO:0021884 "forebrain neuron development" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0006325 "chromatin organization" evidence=NAS]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH471085 GO:GO:0006325 GO:GO:0001046 eggNOG:NOG321816
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 OMA:MHRYDMT CTD:6656 EMBL:Y13436 EMBL:AL138691
IPI:IPI00012162 RefSeq:NP_005977.2 UniGene:Hs.202526
ProteinModelPortal:O00570 SMR:O00570 IntAct:O00570 STRING:O00570
PhosphoSite:O00570 PRIDE:O00570 Ensembl:ENST00000330949 GeneID:6656
KEGG:hsa:6656 UCSC:uc001vsb.1 GeneCards:GC13P112721 HGNC:HGNC:11189
MIM:602148 neXtProt:NX_O00570 PharmGKB:PA36026 InParanoid:O00570
OrthoDB:EOG4DFPQ1 PhylomeDB:O00570 GenomeRNAi:6656 NextBio:25947
Bgee:O00570 CleanEx:HS_SOX1 Genevestigator:O00570
GermOnline:ENSG00000182968 Uniprot:O00570
Length = 391
Score = 178 (67.7 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 57 GAGSATGLRS-KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
G G G ++ +DR++RPMNAFM++S+ R K+ Q +P N +SK LG W + E
Sbjct: 37 GGGGGGGAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAE 96
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEGTGEG 166
K+ + + A ++ H K HP++K+ + K K+ + L G + G G G
Sbjct: 97 KRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLAAGAGGG 149
>MGI|MGI:98368 [details] [associations]
symbol:Sox6 "SRY-box containing gene 6" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP;IDA] [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IGI;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0005667
"transcription factor complex" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0021778 "oligodendrocyte cell fate
specification" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0030218 "erythrocyte differentiation"
evidence=IMP] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISO;IDA] [GO:0035051 "cardiocyte
differentiation" evidence=IDA] [GO:0042692 "muscle cell
differentiation" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048708 "astrocyte differentiation" evidence=ISO]
[GO:0048709 "oligodendrocyte differentiation" evidence=IMP]
[GO:0048821 "erythrocyte development" evidence=IMP] [GO:0051216
"cartilage development" evidence=IGI] [GO:0061036 "positive
regulation of cartilage development" evidence=ISO] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=ISO] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISO] InterPro:IPR009071
InterPro:IPR027153 MGI:MGI:98368 Pfam:PF00505 GO:GO:0071560
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042692 GO:GO:0009791 GO:GO:0000902 GO:GO:0032332
GO:GO:0051216 GO:GO:0048821 GO:GO:0016458 GO:GO:0035051
GO:GO:0061036 GO:GO:0021778 HOVERGEN:HBG003915 KO:K09269
HOGENOM:HOG000056455 eggNOG:NOG253815 GO:GO:2000741 CTD:55553
OMA:FENLGPQ ChiTaRS:SOX6 PANTHER:PTHR10270:SF89 EMBL:U32614
EMBL:D61689 EMBL:AJ010605 EMBL:X65659 IPI:IPI00620986
IPI:IPI00623688 PIR:S22944 PIR:S59121 RefSeq:NP_035575.1
UniGene:Mm.323365 ProteinModelPortal:P40645 SMR:P40645
IntAct:P40645 STRING:P40645 PhosphoSite:P40645 PRIDE:P40645
Ensembl:ENSMUST00000072804 Ensembl:ENSMUST00000166207 GeneID:20679
KEGG:mmu:20679 UCSC:uc009jin.1 InParanoid:P40645 OrthoDB:EOG4N8R45
NextBio:299177 Bgee:P40645 CleanEx:MM_SOX6 Genevestigator:P40645
GermOnline:ENSMUSG00000051910 Uniprot:P40645
Length = 827
Score = 183 (69.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 54/209 (25%), Positives = 99/209 (47%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 616 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQAR 675
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSS 185
+ + H + +P +K+ + KR + ++G + ++ F ++
Sbjct: 676 LSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRS--RRQEMRQFF-TVGQQPQM 732
Query: 186 NETTVQYLLHPTGRLSNIYSTGF-QIPISSESLGNVKQPTTPTVIVSKQSNIEMQNASVA 244
TT +++P G ++ +T Q+ S +P+ P ++ ++M AS+A
Sbjct: 733 PITTGTGVVYP-GAITMATTTPSPQMTSDCSSTSASPEPSLP--VIQSTYGMKMDGASLA 789
Query: 245 A---ANAE-LMQQADKNKDSEQQKYRNFN 269
N E M+ D +D + Y + N
Sbjct: 790 GNDMINGEDEMEAYDDYEDDPKSDYSSEN 818
>UNIPROTKB|Q6VVD7 [details] [associations]
symbol:sox8 "Transcription factor Sox-8" species:8355
"Xenopus laevis" [GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014029 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 CTD:30812 EMBL:AY324658
EMBL:BC169521 EMBL:BC169525 RefSeq:NP_001083964.1 UniGene:Xl.29789
ProteinModelPortal:Q6VVD7 SMR:Q6VVD7 GeneID:399214 KEGG:xla:399214
Xenbase:XB-GENE-480869 Uniprot:Q6VVD7
Length = 459
Score = 179 (68.1 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 47/156 (30%), Positives = 84/156 (53%)
Query: 18 PTGIRKKFNGKQW--RRL--CSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRP 73
P GI K+ +G++ R C +D S+ + + + ++G+G GL++K ++RP
Sbjct: 46 PPGISKR-DGEEPMDERFPACIRDAVSQVLKGYDWSLVPMPVRGSG---GLKAKPHVKRP 101
Query: 74 MNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKA 133
MNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A ++ H K
Sbjct: 102 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKD 161
Query: 134 HPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMP 169
HP++K+ + +R+ S +G+ D G G P
Sbjct: 162 HPDYKY--QPRRRKSVKAGQS---DSDSGAELGHHP 192
>UNIPROTKB|F1MIK5 [details] [associations]
symbol:SOX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021884 "forebrain neuron development" evidence=IEA]
[GO:0021521 "ventral spinal cord interneuron specification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0002089 "lens
morphogenesis in camera-type eye" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001046 GeneTree:ENSGT00690000101940
KO:K09267 InterPro:IPR022097 Pfam:PF12336 OMA:MHRYDMT CTD:6656
EMBL:DAAA02034934 IPI:IPI00693232 RefSeq:XP_002692040.1
RefSeq:XP_875555.1 Ensembl:ENSBTAT00000052847 GeneID:618135
KEGG:bta:618135 NextBio:20901019 Uniprot:F1MIK5
Length = 369
Score = 177 (67.4 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 37/112 (33%), Positives = 60/112 (53%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G G ++DR++RPMNAFM++S+ R K+ Q +P N +SK LG W + EK
Sbjct: 33 GGGGGGSKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEK 92
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEGTGEG 166
+ + + A ++ H K HP++K+ + K K+ + L G + G G G
Sbjct: 93 RPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLAAGAGGG 144
>MGI|MGI:98361 [details] [associations]
symbol:Sox13 "SRY-box containing gene 13" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 MGI:MGI:98361
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00690000101789 CTD:9580
eggNOG:NOG275089 HOVERGEN:HBG003915 KO:K09269 OMA:TMVNCTV
EMBL:BC007130 EMBL:AB006329 EMBL:AJ000740 EMBL:Z18962
IPI:IPI00228353 PIR:JC6550 PIR:S30241 RefSeq:NP_035569.2
UniGene:Mm.8575 ProteinModelPortal:Q04891 SMR:Q04891 STRING:Q04891
PhosphoSite:Q04891 PRIDE:Q04891 Ensembl:ENSMUST00000094551
Ensembl:ENSMUST00000153799 GeneID:20668 KEGG:mmu:20668
UCSC:uc007cqk.1 HOGENOM:HOG000056455 InParanoid:Q04891
NextBio:299137 Bgee:Q04891 CleanEx:MM_SOX13 Genevestigator:Q04891
GermOnline:ENSMUSG00000070643 Uniprot:Q04891
Length = 613
Score = 181 (68.8 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
R+ I+RPMNAFM+++K R K+ Q P+ N ++SKILG W S+ +EKQ Y+E +
Sbjct: 411 RNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQA 470
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ H + +P++K+ + KR R ++G
Sbjct: 471 RLSRQHLEKYPDYKYKPRPKRTCVVEGRRLRVG 503
>RGD|1309674 [details] [associations]
symbol:Sox13 "SRY (sex determining region Y)-box 13"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1309674
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
OrthoDB:EOG40S0F9 IPI:IPI00869801 Ensembl:ENSRNOT00000032244
UCSC:RGD:1309674 Uniprot:D4A8S0
Length = 613
Score = 181 (68.8 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
R+ I+RPMNAFM+++K R K+ Q P+ N ++SKILG W S+ +EKQ Y+E +
Sbjct: 411 RNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQA 470
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ H + +P++K+ + KR R ++G
Sbjct: 471 RLSRQHLEKYPDYKYKPRPKRTCVVEGRRLRVG 503
>UNIPROTKB|Q9UN79 [details] [associations]
symbol:SOX13 "Transcription factor SOX-13" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0043565
EMBL:CH471067 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009653
EMBL:AL592146 EMBL:AF083105 EMBL:AF098915 EMBL:AF116571
EMBL:AK304192 EMBL:AF149301 EMBL:BC106038 IPI:IPI00219551
RefSeq:NP_005677.2 UniGene:Hs.201671 ProteinModelPortal:Q9UN79
SMR:Q9UN79 IntAct:Q9UN79 MINT:MINT-1179847 STRING:Q9UN79
PhosphoSite:Q9UN79 DMDM:288558840 PRIDE:Q9UN79 DNASU:9580
Ensembl:ENST00000367204 GeneID:9580 KEGG:hsa:9580 UCSC:uc001ham.3
CTD:9580 GeneCards:GC01P204043 HGNC:HGNC:11192 MIM:604748
neXtProt:NX_Q9UN79 PharmGKB:PA36029 eggNOG:NOG275089
HOVERGEN:HBG003915 InParanoid:Q9UN79 KO:K09269 OMA:TMVNCTV
OrthoDB:EOG40S0F9 GenomeRNAi:9580 NextBio:35933 ArrayExpress:Q9UN79
Bgee:Q9UN79 CleanEx:HS_SOX13 Genevestigator:Q9UN79
GermOnline:ENSG00000143842 Uniprot:Q9UN79
Length = 622
Score = 181 (68.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
R+ I+RPMNAFM+++K R K+ Q P+ N ++SKILG W S+ +EKQ Y+E +
Sbjct: 419 RNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQA 478
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ H + +P++K+ + KR R ++G
Sbjct: 479 RLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVG 511
>RGD|1309000 [details] [associations]
symbol:Sox6 "SRY (sex determining region Y)-box 6" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000902 "cell morphogenesis" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0009791 "post-embryonic
development" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=ISO] [GO:0021778 "oligodendrocyte cell fate specification"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030218
"erythrocyte differentiation" evidence=ISO] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISO]
[GO:0035051 "cardiocyte differentiation" evidence=ISO] [GO:0042692
"muscle cell differentiation" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048708 "astrocyte
differentiation" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=ISO] [GO:0048821 "erythrocyte
development" evidence=ISO] [GO:0051216 "cartilage development"
evidence=ISO] [GO:0061036 "positive regulation of cartilage
development" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO] [GO:2000741
"positive regulation of mesenchymal stem cell differentiation"
evidence=ISO] InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505
RGD:1309000 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0048708 HOVERGEN:HBG003915 KO:K09269
HOGENOM:HOG000056455 eggNOG:NOG253815 CTD:55553
PANTHER:PTHR10270:SF89 IPI:IPI00371181 EMBL:BC097403
RefSeq:NP_001019922.1 UniGene:Rn.76073 ProteinModelPortal:Q4V8G3
SMR:Q4V8G3 STRING:Q4V8G3 GeneID:293165 KEGG:rno:293165
UCSC:RGD:1309000 NextBio:635493 Genevestigator:Q4V8G3
Uniprot:Q4V8G3
Length = 787
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 54/209 (25%), Positives = 99/209 (47%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 576 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQAR 635
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSS 185
+ + H + +P +K+ + KR + ++G + ++ F ++
Sbjct: 636 LSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRS--RRQEMRQFF-TVGQQPQI 692
Query: 186 NETTVQYLLHPTGRLSNIYSTGF-QIPISSESLGNVKQPTTPTVIVSKQSNIEMQNASVA 244
TT +++P G ++ +T Q+ S +P+ P ++ ++M AS+A
Sbjct: 693 PITTGTGVVYP-GAITMATTTPSPQMTSDCSSTSASPEPSLP--VIQSTYGMKMDGASLA 749
Query: 245 A---ANAE-LMQQADKNKDSEQQKYRNFN 269
N E M+ D +D + Y + N
Sbjct: 750 GNDMINGEDEMEAYDDYEDDPKSDYSSEN 778
>WB|WBGene00004949 [details] [associations]
symbol:sox-2 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0010171 GO:GO:0040011
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0040035 eggNOG:NOG321816 GeneTree:ENSGT00690000101940
HSSP:P48432 KO:K09267 EMBL:FO080256 PIR:T16581 RefSeq:NP_741836.1
ProteinModelPortal:Q21305 SMR:Q21305 STRING:Q21305 PaxDb:Q21305
PRIDE:Q21305 EnsemblMetazoa:K08A8.2a.1 EnsemblMetazoa:K08A8.2a.2
GeneID:181002 KEGG:cel:CELE_K08A8.2 UCSC:K08A8.2a.1 CTD:181002
WormBase:K08A8.2a HOGENOM:HOG000020950 InParanoid:Q21305
OMA:AQNIQNA NextBio:911930 ArrayExpress:Q21305 Uniprot:Q21305
Length = 283
Score = 172 (65.6 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 35/103 (33%), Positives = 58/103 (56%)
Query: 63 GLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
G ++ DR++RPMNAFM++S+ R K+ +P N +SK LG W L +EK+ + +
Sbjct: 53 GKKNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDE 112
Query: 123 ASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEGT 163
A ++ H K HP++K+ + K KS + G++D T
Sbjct: 113 AKRLRAIHMKEHPDYKYRPRRKTKSINKKNGAPIPFGNLDTKT 155
>UNIPROTKB|Q2PG84 [details] [associations]
symbol:sox1 "Transcription factor Sox-1" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007399
"nervous system development" evidence=IMP] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0051091
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6656 EMBL:AB219572 EMBL:EF672727 EMBL:EF192051
EMBL:BC169643 RefSeq:NP_001089143.1 UniGene:Xl.55964
ProteinModelPortal:Q2PG84 SMR:Q2PG84 GeneID:734174 KEGG:xla:734174
Xenbase:XB-GENE-1018276 Uniprot:Q2PG84
Length = 393
Score = 174 (66.3 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 36/104 (34%), Positives = 58/104 (55%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+DR++RPMNAFM++S+ R K+ Q +P N +SK LG W + EK+ + + A
Sbjct: 30 SQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKR 89
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL-GSMDEGTGEGFM 168
++ H K HP++K+ + K K+ + L G + G G M
Sbjct: 90 LRALHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLHAAGGGHM 133
Score = 40 (19.1 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 244 AAANAELMQQADKNKDSEQQKY 265
AAA A +MQ+A +QQ++
Sbjct: 186 AAAAAAMMQEAQLAYSQQQQQH 207
>UNIPROTKB|Q4PIT4 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 UniGene:Cel.8590 GeneID:180833 KEGG:cel:CELE_T22B7.1
UCSC:T22B7.1c.2 CTD:180833 HOGENOM:HOG000020384 NextBio:911168
RefSeq:NP_001024920.1 ProteinModelPortal:Q4PIT4 SMR:Q4PIT4
STRING:Q4PIT4 EnsemblMetazoa:T22B7.1c.1 EnsemblMetazoa:T22B7.1c.2
WormBase:T22B7.1c ArrayExpress:Q4PIT4 Uniprot:Q4PIT4
Length = 422
Score = 177 (67.4 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+S + I+RPMNAFM++++ R K+ + +P+ N +SKILG W + EKQ Y+E S
Sbjct: 276 KSPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQS 335
Query: 125 EVKEAHFKAHPEWKWCSKDKR 145
+ + H + HP++++ + KR
Sbjct: 336 RLSKLHMEQHPDYRYRPRPKR 356
>ZFIN|ZDB-GENE-060322-5 [details] [associations]
symbol:sox1b "SRY-box containing gene 1b"
species:7955 "Danio rerio" [GO:0005667 "transcription factor
complex" evidence=IC] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-060322-5 GO:GO:0007275 GO:GO:0051091
GO:GO:0003677 GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 HOGENOM:HOG000231647 KO:K09267
InterPro:IPR022097 Pfam:PF12336 OrthoDB:EOG40K80Q
HOVERGEN:HBG105663 EMBL:AB242328 EMBL:AL929216 EMBL:BC154495
IPI:IPI00498420 RefSeq:NP_001032751.1 UniGene:Dr.52415
ProteinModelPortal:Q2Z1R2 SMR:Q2Z1R2 STRING:Q2Z1R2 PRIDE:Q2Z1R2
Ensembl:ENSDART00000010894 GeneID:562710 KEGG:dre:562710 CTD:562710
InParanoid:Q2Z1R2 OMA:AMSTTHA NextBio:20884544 Bgee:Q2Z1R2
Uniprot:Q2Z1R2
Length = 340
Score = 174 (66.3 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 37/110 (33%), Positives = 63/110 (57%)
Query: 59 GSATGLR-SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
G +G + ++DR++RPMNAFM++S+ R K+ Q +P N +SK LG W + EK+
Sbjct: 25 GPNSGSKVNQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLMSEAEKR 84
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL-GSMDEGTGEG 166
+ + A ++ H K HP++K+ + K K+ + L G + G+G G
Sbjct: 85 PFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLAGSGGG 134
>WB|WBGene00001182 [details] [associations]
symbol:egl-13 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0009653 "anatomical
structure morphogenesis" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045026 "plasma membrane fusion"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0001708
GO:GO:0018991 GO:GO:0040011 GO:GO:0003700 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0040035
GO:GO:0030163 GO:GO:0009653 GO:GO:0040025 GO:GO:0045026
GeneTree:ENSGT00690000101789 eggNOG:NOG253815 EMBL:FO081738
EMBL:AF097319 PIR:T25909 PIR:T43675 RefSeq:NP_001024918.1
UniGene:Cel.8590 HSSP:P35710 ProteinModelPortal:Q23045 SMR:Q23045
IntAct:Q23045 STRING:Q23045 PRIDE:Q23045 EnsemblMetazoa:T22B7.1a
GeneID:180833 KEGG:cel:CELE_T22B7.1 UCSC:T22B7.1c.2 CTD:180833
WormBase:T22B7.1a HOGENOM:HOG000020384 InParanoid:Q23045
OMA:STISDHT NextBio:911168 ArrayExpress:Q23045 Uniprot:Q23045
Length = 470
Score = 177 (67.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+S + I+RPMNAFM++++ R K+ + +P+ N +SKILG W + EKQ Y+E S
Sbjct: 324 KSPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQS 383
Query: 125 EVKEAHFKAHPEWKWCSKDKR 145
+ + H + HP++++ + KR
Sbjct: 384 RLSKLHMEQHPDYRYRPRPKR 404
>UNIPROTKB|Q23045 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
eggNOG:NOG253815 EMBL:FO081738 EMBL:AF097319 PIR:T25909 PIR:T43675
RefSeq:NP_001024918.1 UniGene:Cel.8590 HSSP:P35710
ProteinModelPortal:Q23045 SMR:Q23045 IntAct:Q23045 STRING:Q23045
PRIDE:Q23045 EnsemblMetazoa:T22B7.1a GeneID:180833
KEGG:cel:CELE_T22B7.1 UCSC:T22B7.1c.2 CTD:180833 WormBase:T22B7.1a
HOGENOM:HOG000020384 InParanoid:Q23045 OMA:STISDHT NextBio:911168
ArrayExpress:Q23045 Uniprot:Q23045
Length = 470
Score = 177 (67.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+S + I+RPMNAFM++++ R K+ + +P+ N +SKILG W + EKQ Y+E S
Sbjct: 324 KSPNHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQS 383
Query: 125 EVKEAHFKAHPEWKWCSKDKR 145
+ + H + HP++++ + KR
Sbjct: 384 RLSKLHMEQHPDYRYRPRPKR 404
>ZFIN|ZDB-GENE-030909-1 [details] [associations]
symbol:sox2 "SRY-box containing gene 2" species:7955
"Danio rerio" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0031101 "fin regeneration" evidence=IMP]
[GO:0048592 "eye morphogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-030909-1 GO:GO:0005737 GO:GO:0051091 GO:GO:0003677
GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031101 OrthoDB:EOG4MPHQV
GeneTree:ENSGT00690000101940 GO:GO:0048592 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:AB242329 EMBL:BC056743
EMBL:BC065656 IPI:IPI00499339 RefSeq:NP_998283.1 UniGene:Dr.5379
ProteinModelPortal:Q6P0E1 SMR:Q6P0E1 STRING:Q6P0E1 PRIDE:Q6P0E1
Ensembl:ENSDART00000104493 GeneID:378723 KEGG:dre:378723
InParanoid:Q6P0E1 NextBio:20813795 Bgee:Q6P0E1 Uniprot:Q6P0E1
Length = 315
Score = 172 (65.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S DRI+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A
Sbjct: 34 SPDRIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKR 93
Query: 126 VKEAHFKAHPEWKWCSKDKRKSST 149
++ H K HP++K+ + +RK+ T
Sbjct: 94 LRALHMKEHPDYKY--RPRRKTKT 115
>UNIPROTKB|F1MBL5 [details] [associations]
symbol:SOX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072289 "metanephric
nephron tubule formation" evidence=IEA] [GO:0072197 "ureter
morphogenesis" evidence=IEA] [GO:0072034 "renal vesicle induction"
evidence=IEA] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=IEA] [GO:0060612 "adipose tissue development"
evidence=IEA] [GO:0060221 "retinal rod cell differentiation"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048469
"cell maturation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IEA] [GO:0045444
"fat cell differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0033690
"positive regulation of osteoblast proliferation" evidence=IEA]
[GO:0014015 "positive regulation of gliogenesis" evidence=IEA]
[GO:0010817 "regulation of hormone levels" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007422 "peripheral nervous system development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0001755 "neural crest cell migration" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0007422
GO:GO:0060612 GO:GO:0003700 GO:GO:0007283 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060009
GO:GO:0090190 GO:GO:0001649 GO:GO:0045444 GO:GO:0000979
GO:GO:0048709 GO:GO:0048484 GO:GO:0010817 GO:GO:0048469
GO:GO:0033690 GO:GO:0045662 GO:GO:0046533 GO:GO:0060018
GO:GO:0014015 GO:GO:0072289 GO:GO:0072197
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
OMA:DQSHGSP GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
EMBL:DAAA02057285 IPI:IPI00696341 Ensembl:ENSBTAT00000027633
Uniprot:F1MBL5
Length = 468
Score = 176 (67.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 58/239 (24%), Positives = 110/239 (46%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHP 93
C +D S+ + + + ++G G L++K ++RPMNAFM++++ R K+ +P
Sbjct: 73 CIRDAVSQVLKGYDWSLVPMPVRGGGGGA-LKAKPHVKRPMNAFMVWAQAARRKLADQYP 131
Query: 94 NQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
+ N +SK LG+ W L EK+ + E A ++ H K HP++K+ + +R+ S +G+
Sbjct: 132 HLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY--QPRRRKSVKTGQ 189
Query: 154 GKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSNETTVQYL---LHPTGRLSNIYSTGFQI 210
D G G P + + L ++ T Q PT ++++ G Q
Sbjct: 190 S---DSDSGAELGHHPGSMYKTDAGLGDAHHHSDHTGQTHGPPTPPTTPKTDLHHGGKQ- 245
Query: 211 PISSESLGNVKQPTTPTVIVSKQSNIEMQNASVAAANAELMQQADKNKDSEQQKYRNFN 269
+ E G ++ S + NI+ N ++ ++E++ D E +Y N
Sbjct: 246 ELKLE--GR-------RLVDSGRQNIDFSNVDISELSSEVIGNMDTFDVHEFDQYLPLN 295
>UNIPROTKB|P48431 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030910 "olfactory placode
formation" evidence=IEA] [GO:0032526 "response to retinoic acid"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0046148 "pigment biosynthetic process"
evidence=IEA] [GO:0048286 "lung alveolus development" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA] [GO:0048852
"diencephalon morphogenesis" evidence=IEA] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=IEA] [GO:0050973 "detection of mechanical stimulus
involved in equilibrioception" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0060235 "lens
induction in camera-type eye" evidence=IEA] [GO:0060441 "epithelial
tube branching involved in lung morphogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC;IDA;NAS] [GO:0003677 "DNA
binding" evidence=IDA;NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA;NAS] [GO:0006325 "chromatin organization"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0001654 "eye development"
evidence=IEP] [GO:0021983 "pituitary gland development"
evidence=IEP] [GO:0030900 "forebrain development" evidence=IEP]
[GO:0048839 "inner ear development" evidence=IEP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0035019 "somatic
stem cell maintenance" evidence=IDA;IMP] [GO:0007050 "cell cycle
arrest" evidence=IDA] [GO:0043281 "regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0070848
"response to growth factor stimulus" evidence=IDA] [GO:0001649
"osteoblast differentiation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0009611 "response to
wounding" evidence=IEP] [GO:0021781 "glial cell fate commitment"
evidence=NAS] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0097150 "neuronal stem cell maintenance" evidence=ISS]
[GO:0001714 "endodermal cell fate specification" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=TAS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0006351
GO:GO:0003682 Orphanet:98938 GO:GO:0005667 GO:GO:0030539
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0042472 GO:GO:0032526
GO:GO:0048286 GO:GO:0050910 GO:GO:0043410 GO:GO:0045666
GO:GO:0090090 GO:GO:0035198 GO:GO:0035019 GO:GO:0001649
GO:GO:0021983 GO:GO:0048839 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0006325 GO:GO:0046148 GO:GO:0021879 GO:GO:0021984
GO:GO:0002052 GO:GO:0048663 GO:GO:0030910 GO:GO:0001654
GO:GO:0060441 GO:GO:0043281 eggNOG:NOG321816 OrthoDB:EOG4MPHQV
GO:GO:0097150 GO:GO:0043586 GO:GO:0060042 GO:GO:0021781
Orphanet:3157 GO:GO:0048852 GO:GO:0050973 PDB:1O4X PDBsum:1O4X
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:Z31560 EMBL:L07335
EMBL:BC013923 IPI:IPI00009703 RefSeq:NP_003097.1 UniGene:Hs.518438
UniGene:Hs.732963 PDB:2LE4 PDBsum:2LE4 ProteinModelPortal:P48431
SMR:P48431 DIP:DIP-59913N STRING:P48431 PhosphoSite:P48431
DMDM:1351091 PRIDE:P48431 DNASU:6657 Ensembl:ENST00000325404
Ensembl:ENST00000431565 GeneID:6657 KEGG:hsa:6657 UCSC:uc003fkx.3
GeneCards:GC03P181429 HGNC:HGNC:11195 HPA:CAB010648 MIM:184429
MIM:206900 neXtProt:NX_P48431 Orphanet:77298 PharmGKB:PA36032
InParanoid:P48431 PhylomeDB:P48431 EvolutionaryTrace:P48431
GenomeRNAi:6657 NextBio:25951 Bgee:P48431 CleanEx:HS_SOX2
Genevestigator:P48431 GermOnline:ENSG00000181449 Uniprot:P48431
Length = 317
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 54 SLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
S A S DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L
Sbjct: 25 STAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSE 84
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
EK+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 85 TEKRPFIDEAKRLRALHMKEHPDYKY--RPRRKTKT 118
>UNIPROTKB|B1PXF9 [details] [associations]
symbol:Sox2 "Sex determining region Y-box 2" species:9823
"Sus scrofa" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0070848 "response to
growth factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
eggNOG:NOG321816 OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973
HOGENOM:HOG000231647 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 OMA:MSALQYN EMBL:CU914271 EMBL:EU503117
UniGene:Ssc.42849 ProteinModelPortal:B1PXF9 SMR:B1PXF9
STRING:B1PXF9 Ensembl:ENSSSCT00000012883 Uniprot:B1PXF9
Length = 319
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 54 SLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
S A S DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L
Sbjct: 27 STAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSE 86
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
EK+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 87 TEKRPFIDEAKRLRALHMKEHPDYKY--RPRRKTKT 120
>ZFIN|ZDB-GENE-051113-268 [details] [associations]
symbol:sox14 "SRY-box containing gene 14"
species:7955 "Danio rerio" [GO:0021854 "hypothalamus development"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-051113-268 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021854
GeneTree:ENSGT00690000101940 HSSP:P48431 CTD:8403 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 OrthoDB:EOG47D9H0 InterPro:IPR022097
Pfam:PF12336 EMBL:BC108033 IPI:IPI00511312 RefSeq:NP_001032769.1
UniGene:Dr.52424 ProteinModelPortal:Q32PP9 SMR:Q32PP9 STRING:Q32PP9
Ensembl:ENSDART00000104532 GeneID:557661 KEGG:dre:557661
InParanoid:Q32PP9 OMA:LGCPSQH NextBio:20882094 Bgee:Q32PP9
Uniprot:Q32PP9
Length = 238
Score = 165 (63.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ Y + A ++
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKS 147
H K HP++K+ + K K+
Sbjct: 66 AQHMKEHPDYKYRPRRKPKN 85
>UNIPROTKB|A2VDX8 [details] [associations]
symbol:SOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070848 "response to growth
factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
eggNOG:NOG321816 OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:DAAA02001921
EMBL:BC133458 IPI:IPI00701823 RefSeq:NP_001098933.1
UniGene:Bt.103364 SMR:A2VDX8 STRING:A2VDX8
Ensembl:ENSBTAT00000015411 GeneID:784383 KEGG:bta:784383
InParanoid:A2VDX8 NextBio:20926664 Uniprot:A2VDX8
Length = 320
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 54 SLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
S A S DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L
Sbjct: 28 STAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSE 87
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
EK+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 88 TEKRPFIDEAKRLRALHMKEHPDYKY--RPRRKTKT 121
>UNIPROTKB|P54231 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9940 "Ovis
aries" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISS] [GO:0097150
"neuronal stem cell maintenance" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0045665 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0097150 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 EMBL:X96997
ProteinModelPortal:P54231 SMR:P54231 Uniprot:P54231
Length = 320
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 54 SLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
S A S DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L
Sbjct: 28 STAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSE 87
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
EK+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 88 TEKRPFIDEAKRLRALHMKEHPDYKY--RPRRKTKT 121
>UNIPROTKB|E2R1W3 [details] [associations]
symbol:SOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0070848 "response to
growth factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
GeneTree:ENSGT00690000101940 GO:GO:0043586 GO:GO:0060042
GO:GO:0048852 GO:GO:0050973 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6657 OMA:MSALQYN EMBL:AAEX03017262
RefSeq:XP_545216.3 Ensembl:ENSCAFT00000018476 GeneID:488092
KEGG:cfa:488092 NextBio:20861523 Uniprot:E2R1W3
Length = 324
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 54 SLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
S A S DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L
Sbjct: 32 STAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSE 91
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
EK+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 92 TEKRPFIDEAKRLRALHMKEHPDYKY--RPRRKTKT 125
>UNIPROTKB|A2TED3 [details] [associations]
symbol:sox1 "Transcription factor Sox-1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007399
GO:GO:0051091 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
CTD:6656 EMBL:EF192052 EMBL:BC121846 EMBL:BC159121
RefSeq:NP_001074465.1 UniGene:Str.35422 ProteinModelPortal:A2TED3
SMR:A2TED3 STRING:A2TED3 GeneID:779569 KEGG:xtr:779569
Xenbase:XB-GENE-1018269 Uniprot:A2TED3
Length = 401
Score = 172 (65.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 59 GSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQK 118
G ++DR++RPMNAFM++S+ R K+ Q +P N +SK LG W + EK+
Sbjct: 26 GGGGNKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRP 85
Query: 119 YHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL-GSMDEGTGEGFM 168
+ + A ++ H K HP++K+ + K K+ + L G + G G M
Sbjct: 86 FIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLHAAGGGHM 136
Score = 40 (19.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 244 AAANAELMQQADKNKDSEQQKY 265
AAA A +MQ+A +QQ++
Sbjct: 186 AAAAAAMMQEAQLAYSQQQQQH 207
>UNIPROTKB|Q9W7R6 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AB026622 EMBL:AF193760 EMBL:M86326 IPI:IPI00585113 PIR:I50196
RefSeq:NP_990092.1 UniGene:Gga.286 ProteinModelPortal:Q9W7R6
SMR:Q9W7R6 STRING:Q9W7R6 GeneID:395526 KEGG:gga:395526 CTD:8403
eggNOG:NOG302715 HOGENOM:HOG000231647 HOVERGEN:HBG105618
InParanoid:Q9W7R6 KO:K09267 OrthoDB:EOG47D9H0 NextBio:20815603
InterPro:IPR022097 Pfam:PF12336 Uniprot:Q9W7R6
Length = 240
Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+ D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ Y + A
Sbjct: 3 KPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAK 62
Query: 125 EVKEAHFKAHPEWKWCSKDKRKS 147
++ H K HP++K+ + K K+
Sbjct: 63 RLRAQHMKEHPDYKYRPRRKPKN 85
>UNIPROTKB|O95416 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007399
"nervous system development" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0007399 EMBL:CH471052 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:8403 eggNOG:NOG302715 HOGENOM:HOG000231647
HOVERGEN:HBG105618 KO:K09267 OrthoDB:EOG47D9H0 InterPro:IPR022097
Pfam:PF12336 OMA:LGCPSQH EMBL:AF107043 EMBL:AJ006230 EMBL:AF193436
EMBL:AK314127 EMBL:BC106729 EMBL:BC106730 EMBL:AF032451
IPI:IPI00030676 RefSeq:NP_004180.1 UniGene:Hs.248184
ProteinModelPortal:O95416 SMR:O95416 STRING:O95416
PhosphoSite:O95416 PRIDE:O95416 Ensembl:ENST00000306087 GeneID:8403
KEGG:hsa:8403 UCSC:uc003erm.2 GeneCards:GC03P137483 HGNC:HGNC:11193
MIM:604747 neXtProt:NX_O95416 PharmGKB:PA36030 InParanoid:O95416
PhylomeDB:O95416 GenomeRNAi:8403 NextBio:31446 Bgee:O95416
CleanEx:HS_SOX14 Genevestigator:O95416 GermOnline:ENSG00000168875
Uniprot:O95416
Length = 240
Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+ D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ Y + A
Sbjct: 3 KPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAK 62
Query: 125 EVKEAHFKAHPEWKWCSKDKRKS 147
++ H K HP++K+ + K K+
Sbjct: 63 RLRAQHMKEHPDYKYRPRRKPKN 85
>UNIPROTKB|P61259 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9541
"Macaca fascicularis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG105618
InterPro:IPR022097 Pfam:PF12336 EMBL:AB063098
ProteinModelPortal:P61259 SMR:P61259 Uniprot:P61259
Length = 240
Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+ D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ Y + A
Sbjct: 3 KPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAK 62
Query: 125 EVKEAHFKAHPEWKWCSKDKRKS 147
++ H K HP++K+ + K K+
Sbjct: 63 RLRAQHMKEHPDYKYRPRRKPKN 85
>MGI|MGI:98362 [details] [associations]
symbol:Sox14 "SRY-box containing gene 14" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
MGI:MGI:98362 Pfam:PF00505 GO:GO:0005634 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:8403 eggNOG:NOG302715
HOVERGEN:HBG105618 KO:K09267 OrthoDB:EOG47D9H0 OMA:LGCPSQH
EMBL:AF193437 EMBL:AF193435 EMBL:AF182357 EMBL:Z18963
IPI:IPI00929882 PIR:S30244 RefSeq:NP_035570.1 UniGene:Mm.261595
UniGene:Mm.484077 ProteinModelPortal:Q04892 SMR:Q04892
STRING:Q04892 PhosphoSite:Q04892 PRIDE:Q04892
Ensembl:ENSMUST00000054819 GeneID:20669 KEGG:mmu:20669
InParanoid:Q04892 NextBio:299141 Bgee:Q04892 CleanEx:MM_SOX14
Genevestigator:Q04892 Uniprot:Q04892
Length = 240
Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+ D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ Y + A
Sbjct: 3 KPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAK 62
Query: 125 EVKEAHFKAHPEWKWCSKDKRKS 147
++ H K HP++K+ + K K+
Sbjct: 63 RLRAQHMKEHPDYKYRPRRKPKN 85
>RGD|1309654 [details] [associations]
symbol:Sox14 "SRY (sex determining region Y)-box 14"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
Pfam:PF00505 RGD:1309654 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:CH473954 CTD:8403
HOVERGEN:HBG105618 KO:K09267 OMA:LGCPSQH EMBL:EU853677
IPI:IPI00870866 RefSeq:NP_001100320.1 UniGene:Rn.141574 SMR:B7SZV3
GeneID:300954 KEGG:rno:300954 UCSC:RGD:1309654 NextBio:647780
Genevestigator:B7SZV3 Uniprot:B7SZV3
Length = 240
Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+ D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ Y + A
Sbjct: 3 KPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAK 62
Query: 125 EVKEAHFKAHPEWKWCSKDKRKS 147
++ H K HP++K+ + K K+
Sbjct: 63 RLRAQHMKEHPDYKYRPRRKPKN 85
>ZFIN|ZDB-GENE-040718-186 [details] [associations]
symbol:sox1a "SRY-box containing gene 1a"
species:7955 "Danio rerio" [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-040718-186
GO:GO:0007275 GO:GO:0051091 GO:GO:0003677 GO:GO:0006351
GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 eggNOG:NOG321816 GeneTree:ENSGT00690000101940
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
EMBL:AB242327 EMBL:CR392332 EMBL:BC076326 EMBL:BC096992
IPI:IPI00492442 RefSeq:NP_001002483.1 UniGene:Dr.6453
ProteinModelPortal:Q6DGL6 SMR:Q6DGL6 STRING:Q6DGL6
Ensembl:ENSDART00000102021 GeneID:436756 KEGG:dre:436756 CTD:436756
HOVERGEN:HBG105663 InParanoid:Q6DGL6 OMA:MHRYDMT OrthoDB:EOG40K80R
NextBio:20831193 Bgee:Q6DGL6 Uniprot:Q6DGL6
Length = 336
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 37/110 (33%), Positives = 62/110 (56%)
Query: 59 GSATGLRS-KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
G +G ++ +DR++RPMNAFM++S+ R K+ Q +P N +SK LG W + EK+
Sbjct: 25 GPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKR 84
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL-GSMDEGTGEG 166
+ + A ++ H K HP++K+ + K K+ + L G + G G G
Sbjct: 85 PFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLGGAGGG 134
>FB|FBgn0039938 [details] [associations]
symbol:Sox102F "Sox102F" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AE014135 GeneTree:ENSGT00690000101789 eggNOG:NOG253815
EMBL:BT133294 RefSeq:NP_001014695.1 UniGene:Dm.18582 SMR:Q59DN5
EnsemblMetazoa:FBtr0100600 GeneID:43844 KEGG:dme:Dmel_CG11153
UCSC:CG11153-RB CTD:43844 FlyBase:FBgn0039938 OMA:LMRNRRA
OrthoDB:EOG42BVQS GenomeRNAi:43844 NextBio:836205 Uniprot:Q59DN5
Length = 618
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 34/90 (37%), Positives = 55/90 (61%)
Query: 57 GAGSATG-LRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
G G G + SK I+RPMNAFM+++K R K+ + P+ N +SKILG W ++ +
Sbjct: 409 GHGGNHGHVHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNAD 468
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKR 145
KQ Y+E S + + H + HP++++ + KR
Sbjct: 469 KQPYYEEQSRLSKLHMEQHPDYRYRPRPKR 498
>MGI|MGI:98364 [details] [associations]
symbol:Sox2 "SRY-box containing gene 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001649 "osteoblast differentiation" evidence=ISO] [GO:0001708
"cell fate specification" evidence=IMP] [GO:0001714 "endodermal
cell fate specification" evidence=ISO] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=ISO;IGI;IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0010468
"regulation of gene expression" evidence=ISO] [GO:0019827 "stem
cell maintenance" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021984 "adenohypophysis
development" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IGI] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IDA]
[GO:0030910 "olfactory placode formation" evidence=IGI] [GO:0032526
"response to retinoic acid" evidence=IDA] [GO:0035019 "somatic stem
cell maintenance" evidence=ISO] [GO:0035198 "miRNA binding"
evidence=ISO] [GO:0042221 "response to chemical stimulus"
evidence=IDA] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0043586
"tongue development" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045165 "cell
fate commitment" evidence=IDA] [GO:0045596 "negative regulation of
cell differentiation" evidence=IMP] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IMP]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IDA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046148 "pigment biosynthetic
process" evidence=IMP] [GO:0048286 "lung alveolus development"
evidence=IDA] [GO:0048568 "embryonic organ development"
evidence=IMP] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=IMP] [GO:0048663 "neuron fate
commitment" evidence=IMP] [GO:0048852 "diencephalon morphogenesis"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IDA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISO] [GO:0050767 "regulation of neurogenesis"
evidence=IGI] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IMP] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IMP] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IMP] [GO:0060235 "lens induction in camera-type eye"
evidence=IGI] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IDA] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISO;IDA]
[GO:0097150 "neuronal stem cell maintenance" evidence=IGI]
InterPro:IPR009071 MGI:MGI:98364 Pfam:PF00505 GO:GO:0005737
GO:GO:0021987 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0045666 GO:GO:0090090 GO:GO:0060235 GO:GO:0030858
GO:GO:0001714 GO:GO:0045668 GO:GO:0046148 GO:GO:0021879
GO:GO:0021984 GO:GO:0002052 GO:GO:0048663 GO:GO:0030910
GO:GO:0060441 eggNOG:NOG321816 OrthoDB:EOG4MPHQV GO:GO:0097150
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973 PDB:1GT0
PDBsum:1GT0 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6657 EMBL:U31967 EMBL:X94127
IPI:IPI00319017 PIR:S10949 RefSeq:NP_035573.3 UniGene:Mm.65396
ProteinModelPortal:P48432 SMR:P48432 DIP:DIP-54522N IntAct:P48432
STRING:P48432 PhosphoSite:P48432 PRIDE:P48432 GeneID:20674
KEGG:mmu:20674 InParanoid:P48432 EvolutionaryTrace:P48432
NextBio:299161 CleanEx:MM_SOX2 Genevestigator:P48432
GermOnline:ENSMUSG00000074637 Uniprot:P48432
Length = 319
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 60 SATGLRSK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
+ATG K DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK
Sbjct: 30 AATGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEK 89
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 90 RPFIDEAKRLRALHMKEHPDYKY--RPRRKTKT 120
>RGD|1565646 [details] [associations]
symbol:Sox2 "SRY (sex determining region Y)-box 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IDA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0001654 "eye development" evidence=ISO]
[GO:0001708 "cell fate specification" evidence=ISO] [GO:0001714
"endodermal cell fate specification" evidence=IEA;ISO] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007050 "cell cycle
arrest" evidence=IEA;ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009611 "response to wounding" evidence=IEA;ISO] [GO:0010468
"regulation of gene expression" evidence=ISO] [GO:0019827 "stem
cell maintenance" evidence=ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021983 "pituitary gland
development" evidence=ISO] [GO:0021984 "adenohypophysis
development" evidence=IEA;ISO] [GO:0021987 "cerebral cortex
development" evidence=IEA;ISO] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=ISO] [GO:0030539 "male
genitalia development" evidence=IEA;ISO] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IEA;ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030910
"olfactory placode formation" evidence=IEA;ISO] [GO:0032526
"response to retinoic acid" evidence=IEA;ISO] [GO:0035019 "somatic
stem cell maintenance" evidence=IEA;ISO] [GO:0035198 "miRNA
binding" evidence=IEA;ISO] [GO:0042221 "response to chemical
stimulus" evidence=ISO] [GO:0042472 "inner ear morphogenesis"
evidence=IEA;ISO] [GO:0043281 "regulation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043586 "tongue development" evidence=IEA;ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045165 "cell fate commitment" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA;ISO]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046148 "pigment biosynthetic process"
evidence=IEA;ISO] [GO:0048286 "lung alveolus development"
evidence=IEA;ISO] [GO:0048568 "embryonic organ development"
evidence=ISO] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISO] [GO:0048663 "neuron fate
commitment" evidence=IEA;ISO] [GO:0048839 "inner ear development"
evidence=ISO] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=ISO] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA;ISO]
[GO:0050973 "detection of mechanical stimulus involved in
equilibrioception" evidence=IEA;ISO] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA;ISO] [GO:0060235
"lens induction in camera-type eye" evidence=IEA;ISO] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IEA;ISO] [GO:0070848 "response to growth factor stimulus"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:0097150 "neuronal
stem cell maintenance" evidence=ISO] InterPro:IPR009071
Pfam:PF00505 RGD:1565646 GO:GO:0005829 GO:GO:0005634 GO:GO:0021987
GO:GO:0009611 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0045747 GO:GO:0007050 GO:GO:0003682 GO:GO:0005667
GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0042472 GO:GO:0032526
GO:GO:0048286 GO:GO:0050910 GO:GO:0043410 GO:GO:0045666
GO:GO:0090090 GO:GO:0035198 GO:GO:0035019 GO:GO:0001649
GO:GO:0000976 GO:GO:0050680 GO:GO:0070848 GO:GO:0060235
GO:GO:0030858 GO:GO:0001714 GO:GO:0045668 GO:GO:0046148
GO:GO:0021879 GO:GO:0021984 GO:GO:0002052 GO:GO:0048663
GO:GO:0030910 GO:GO:0060441 GO:GO:0043281 EMBL:CH473961
OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940 GO:GO:0043586
GO:GO:0060042 GO:GO:0048852 GO:GO:0050973 KO:K09267
InterPro:IPR022097 Pfam:PF12336 CTD:6657 OMA:MSALQYN
IPI:IPI00215605 RefSeq:NP_001102651.1 UniGene:Rn.17369 SMR:D4A543
Ensembl:ENSRNOT00000016236 GeneID:499593 KEGG:rno:499593
UCSC:RGD:1565646 NextBio:703377 Uniprot:D4A543
Length = 319
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 60 SATGLRSK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
+ATG K DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK
Sbjct: 30 AATGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEK 89
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 90 RPFIDEAKRLRALHMKEHPDYKY--RPRRKTKT 120
>UNIPROTKB|F1NAU5 [details] [associations]
symbol:SOX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016458 "gene silencing" evidence=IEA]
[GO:0021778 "oligodendrocyte cell fate specification" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0035051 "cardiocyte differentiation"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0048821 "erythrocyte development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0061036 "positive
regulation of cartilage development" evidence=IEA] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=IEA] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=IEA] InterPro:IPR009071
InterPro:IPR027153 Pfam:PF00505 GO:GO:0005634 GO:GO:0071560
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0032332 GO:GO:0045165 GO:GO:0016458
GO:GO:0061036 GeneTree:ENSGT00690000101789 GO:GO:2000741
OMA:FENLGPQ PANTHER:PTHR10270:SF89 EMBL:AADN02030483
EMBL:AADN02030484 EMBL:AADN02030485 EMBL:AADN02030486
EMBL:AADN02030487 EMBL:AADN02030488 EMBL:AADN02030489
EMBL:AADN02030490 EMBL:AADN02030491 EMBL:AADN02030492
EMBL:AADN02030493 EMBL:AADN02030494 EMBL:AADN02030495
EMBL:AADN02030496 EMBL:AADN02030497 EMBL:AADN02030498
EMBL:AADN02030499 EMBL:AADN02030500 EMBL:AADN02030501
EMBL:AADN02030502 EMBL:AADN02030503 EMBL:AADN02030504
EMBL:AADN02030505 IPI:IPI00597024 Ensembl:ENSGALT00000009804
Uniprot:F1NAU5
Length = 783
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 572 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQAR 631
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ + H + +P +K+ + KR + ++G
Sbjct: 632 LSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIG 663
>UNIPROTKB|F6UQM4 [details] [associations]
symbol:SOX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR027153
Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00690000101789 OMA:FENLGPQ
PANTHER:PTHR10270:SF89 Ensembl:ENSCAFT00000013736 EMBL:AAEX03012946
EMBL:AAEX03012947 EMBL:AAEX03012948 Uniprot:F6UQM4
Length = 793
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 582 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQAR 641
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ + H + +P +K+ + KR + ++G
Sbjct: 642 LSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIG 673
>UNIPROTKB|P35712 [details] [associations]
symbol:SOX6 "Transcription factor SOX-6" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016458 "gene silencing" evidence=IEA]
[GO:0021778 "oligodendrocyte cell fate specification" evidence=IEA]
[GO:0035051 "cardiocyte differentiation" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048821 "erythrocyte
development" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0007517 "muscle
organ development" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IDA] [GO:0061036 "positive regulation of
cartilage development" evidence=IDA] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=IDA]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505
GO:GO:0005634 EMBL:CH471064 GO:GO:0071560 GO:GO:0003677
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0042692
GO:GO:0009791 GO:GO:0007517 GO:GO:0000902 GO:GO:0032332
GO:GO:0051216 GO:GO:0048821 GO:GO:0016458 GO:GO:0035051
GO:GO:0061036 GO:GO:0021778 HOVERGEN:HBG003915 KO:K09269
HOGENOM:HOG000056455 eggNOG:NOG253815 GO:GO:2000741 EMBL:AF309034
EMBL:AF309476 EMBL:AF309471 EMBL:AF309472 EMBL:AF309473
EMBL:AF309474 EMBL:AF309475 EMBL:AL136780 EMBL:AC009869
EMBL:AC013595 EMBL:AC027016 EMBL:AC068405 EMBL:AC103794
EMBL:BC037866 EMBL:BC047064 EMBL:X65663 IPI:IPI00218631
IPI:IPI00641980 IPI:IPI00872738 IPI:IPI00926649
RefSeq:NP_001139283.1 RefSeq:NP_001139291.1 RefSeq:NP_059978.1
RefSeq:NP_201583.2 UniGene:Hs.368226 ProteinModelPortal:P35712
SMR:P35712 IntAct:P35712 STRING:P35712 PhosphoSite:P35712
DMDM:215274178 PaxDb:P35712 PRIDE:P35712 DNASU:55553
Ensembl:ENST00000316399 Ensembl:ENST00000352083
Ensembl:ENST00000396356 Ensembl:ENST00000527619
Ensembl:ENST00000528252 Ensembl:ENST00000528429 GeneID:55553
KEGG:hsa:55553 UCSC:uc001mmd.3 UCSC:uc001mme.3 UCSC:uc001mmf.3
UCSC:uc001mmg.3 CTD:55553 GeneCards:GC11M015949 HGNC:HGNC:16421
HPA:HPA001923 HPA:HPA003908 MIM:607257 neXtProt:NX_P35712
PharmGKB:PA38137 InParanoid:P35712 OMA:FENLGPQ ChiTaRS:SOX6
GenomeRNAi:55553 NextBio:60012 ArrayExpress:P35712 Bgee:P35712
CleanEx:HS_SOX6 Genevestigator:P35712 GermOnline:ENSG00000110693
PANTHER:PTHR10270:SF89 Uniprot:P35712
Length = 828
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 617 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQAR 676
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ + H + +P +K+ + KR + ++G
Sbjct: 677 LSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIG 708
>UNIPROTKB|E2QTS7 [details] [associations]
symbol:SOX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR027153
Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 PANTHER:PTHR10270:SF89 Ensembl:ENSCAFT00000013736
Uniprot:E2QTS7
Length = 829
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 618 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQAR 677
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ + H + +P +K+ + KR + ++G
Sbjct: 678 LSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIG 709
>UNIPROTKB|A4QNG3 [details] [associations]
symbol:sox14 "Transcription factor Sox-14" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007399
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021854
GeneTree:ENSGT00690000101940 CTD:8403 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 OMA:LGCPSQH EMBL:AM922298
EMBL:BC135637 RefSeq:NP_001093703.1 UniGene:Str.72434
ProteinModelPortal:A4QNG3 SMR:A4QNG3 STRING:A4QNG3
Ensembl:ENSXETT00000049107 GeneID:100101715 KEGG:xtr:100101715
Xenbase:XB-GENE-485370 Bgee:A4QNG3 Uniprot:A4QNG3
Length = 239
Score = 164 (62.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ Y + A ++
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKS 147
H K HP++K+ + K K+
Sbjct: 66 AQHMKEHPDYKYRPRRKPKN 85
>UNIPROTKB|B0ZTE2 [details] [associations]
symbol:sox14 "Transcription factor Sox-14" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0007399 "nervous
system development" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:8403 KO:K09267 EMBL:EU403425
RefSeq:NP_001165685.1 UniGene:Xl.85736 ProteinModelPortal:B0ZTE2
SMR:B0ZTE2 GeneID:100337614 KEGG:xla:100337614
Xenbase:XB-GENE-6458188 Uniprot:B0ZTE2
Length = 239
Score = 164 (62.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ Y + A ++
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKS 147
H K HP++K+ + K K+
Sbjct: 66 AQHMKEHPDYKYRPRRKPKN 85
>UNIPROTKB|E1BE01 [details] [associations]
symbol:SOX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0061036
"positive regulation of cartilage development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048821
"erythrocyte development" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0035051 "cardiocyte differentiation"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0021778 "oligodendrocyte cell
fate specification" evidence=IEA] [GO:0016458 "gene silencing"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR009071
InterPro:IPR027153 Pfam:PF00505 GO:GO:0005634 GO:GO:0071560
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0042692 GO:GO:0009791
GO:GO:0000902 GO:GO:0032332 GO:GO:0051216 GO:GO:0048821
GO:GO:0016458 GO:GO:0035051 GO:GO:0061036 GO:GO:0021778
GeneTree:ENSGT00690000101789 KO:K09269 GO:GO:2000741 CTD:55553
OMA:FENLGPQ PANTHER:PTHR10270:SF89 EMBL:DAAA02040602
EMBL:DAAA02040603 EMBL:DAAA02040604 EMBL:DAAA02040605
EMBL:DAAA02040606 EMBL:DAAA02040607 EMBL:DAAA02040608
EMBL:DAAA02040609 EMBL:DAAA02040610 EMBL:DAAA02040611
EMBL:DAAA02040612 IPI:IPI01000762 RefSeq:NP_001178347.1
UniGene:Bt.62052 Ensembl:ENSBTAT00000061473 GeneID:534321
KEGG:bta:534321 NextBio:20876354 Uniprot:E1BE01
Length = 841
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 630 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQAR 689
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
+ + H + +P +K+ + KR + ++G
Sbjct: 690 LSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIG 721
>ZFIN|ZDB-GENE-001103-2 [details] [associations]
symbol:sox9b "SRY-box containing gene 9b"
species:7955 "Danio rerio" [GO:0048839 "inner ear development"
evidence=IGI;IMP] [GO:0043049 "otic placode formation"
evidence=IGI;IMP] [GO:0060041 "retina development in camera-type
eye" evidence=IMP] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IMP] [GO:0030318
"melanocyte differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IGI] [GO:0050935 "iridophore
differentiation" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-001103-2 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060041 GO:GO:0051216
GO:GO:0031016 GO:GO:0030318 GO:GO:0035118 GO:GO:0043049
GO:GO:0050935 GeneTree:ENSGT00670000097649 InterPro:IPR022151
Pfam:PF12444 EMBL:CU855796 IPI:IPI00994467
Ensembl:ENSDART00000124464 ArrayExpress:F1QDZ3 Bgee:F1QDZ3
Uniprot:F1QDZ3
Length = 408
Score = 173 (66.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 55/186 (29%), Positives = 98/186 (52%)
Query: 33 LCSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIH 92
+C +D S+ +GY + + S +G +SK ++RPMNAFM++++ R K+ +
Sbjct: 57 VCIRDAVSQVL--KGYDWSLVPMPVRVSGSG-KSKPHVKRPMNAFMVWAQAARRKLADQY 113
Query: 93 PNQDNRTVSKILGEWWYSLGPE-EKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGS 151
P+ N +SK LG+ W L E EK+ + E A ++ H K HP++K+ + +R+ S
Sbjct: 114 PHLHNAELSKTLGKLWSRLLNEGEKRPFVEEAERLRVQHKKDHPDYKY--QPRRRKSV-- 169
Query: 152 GRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSNETTVQYLLHPTGRLSNIYSTGF-QI 210
K GS + GE F +L+ + + +T + LH G S +S GF Q+
Sbjct: 170 ---KSGSAESEDGEQTQISTNALFR-ALQRAETPDSSTGE--LHSPGEHSE-FSLGFKQM 222
Query: 211 PISSES 216
P+++++
Sbjct: 223 PLTAKT 228
>UNIPROTKB|O42569 [details] [associations]
symbol:sox2 "Transcription factor Sox-2" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007399
"nervous system development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267
InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663 CTD:6657
EMBL:AF005476 EMBL:AF022928 EMBL:BC076717 RefSeq:NP_001081691.1
UniGene:Xl.188 ProteinModelPortal:O42569 SMR:O42569 DIP:DIP-29886N
GeneID:398000 KEGG:xla:398000 Xenbase:XB-GENE-865099 Uniprot:O42569
Length = 311
Score = 170 (64.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A
Sbjct: 33 SPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKR 92
Query: 126 VKEAHFKAHPEWKWCSKDKRKSST 149
++ H K HP++K+ + +RK+ T
Sbjct: 93 LRALHMKEHPDYKY--RPRRKTKT 114
>UNIPROTKB|Q6NVN0 [details] [associations]
symbol:sox2 "Transcription factor Sox-2" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0051091 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0031101 OrthoDB:EOG4MPHQV
GeneTree:ENSGT00690000101940 GO:GO:0048592 HSSP:P48432
eggNOG:NOG302715 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6657 EMBL:CR760314 EMBL:BC067975
RefSeq:NP_998869.1 UniGene:Str.6201 ProteinModelPortal:Q6NVN0
SMR:Q6NVN0 Ensembl:ENSXETT00000004031 GeneID:407873 KEGG:xtr:407873
Xenbase:XB-GENE-484553 InParanoid:Q6NVN0 OMA:SAHNAPQ Bgee:Q6NVN0
Uniprot:Q6NVN0
Length = 311
Score = 170 (64.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A
Sbjct: 33 SPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKR 92
Query: 126 VKEAHFKAHPEWKWCSKDKRKSST 149
++ H K HP++K+ + +RK+ T
Sbjct: 93 LRALHMKEHPDYKY--RPRRKTKT 114
>ZFIN|ZDB-GENE-991213-1 [details] [associations]
symbol:sox17 "SRY-box containing gene 17"
species:7955 "Danio rerio" [GO:0070121 "Kupffer's vesicle
development" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0035469 "determination of
pancreatic left/right asymmetry" evidence=IMP] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-991213-1 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0070121 GO:GO:0061371
HSSP:P48432 HOVERGEN:HBG000517 GO:GO:0035469 EMBL:AF168614
IPI:IPI00490847 UniGene:Dr.81308 ProteinModelPortal:Q9PTN0
SMR:Q9PTN0 STRING:Q9PTN0 InParanoid:Q9PTN0 ArrayExpress:Q9PTN0
Uniprot:Q9PTN0
Length = 413
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 37/97 (38%), Positives = 60/97 (61%)
Query: 50 SRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWY 109
S+H AG G +S+ RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W
Sbjct: 44 SKHEKCSAAGPGRG-KSEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWK 102
Query: 110 SLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRK 146
+L +K+ + E A ++ H + HP +K+ K +RK
Sbjct: 103 ALPMVDKRPFVEEAERLRVKHMQDHPNYKYRPK-RRK 138
>UNIPROTKB|P48430 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IEA] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0032526
"response to retinoic acid" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IEA] [GO:0043586 "tongue
development" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0045747
"positive regulation of Notch signaling pathway" evidence=IEA]
[GO:0046148 "pigment biosynthetic process" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0048663
"neuron fate commitment" evidence=IEA] [GO:0048852 "diencephalon
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=IEA] [GO:0050973 "detection of mechanical stimulus
involved in equilibrioception" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0060235 "lens
induction in camera-type eye" evidence=IEA] [GO:0060441 "epithelial
tube branching involved in lung morphogenesis" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0005634
GO:GO:0001708 GO:GO:0009611 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0045665 GO:GO:0003700 GO:GO:0045747
GO:GO:0007050 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0032526 GO:GO:0043410
GO:GO:0090090 GO:GO:0035198 GO:GO:0050680 GO:GO:0070848
GO:GO:0030858 GO:GO:0045668 GO:GO:0046148 GO:GO:0043281
OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940 HOGENOM:HOG000231647
KO:K09267 InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663
EMBL:U12532 EMBL:D50603 EMBL:AB092842 IPI:IPI00578945 PIR:I50706
RefSeq:NP_990519.1 UniGene:Gga.601 ProteinModelPortal:P48430
SMR:P48430 STRING:P48430 Ensembl:ENSGALT00000014379 GeneID:396105
KEGG:gga:396105 CTD:6657 InParanoid:P48430 OMA:MSALQYN
NextBio:20816163 ArrayExpress:P48430 Uniprot:P48430
Length = 315
Score = 170 (64.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A
Sbjct: 35 SPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKR 94
Query: 126 VKEAHFKAHPEWKWCSKDKRKSST 149
++ H K HP++K+ + +RK+ T
Sbjct: 95 LRALHMKEHPDYKY--RPRRKTKT 116
>ZFIN|ZDB-GENE-980526-333 [details] [associations]
symbol:sox3 "SRY-box containing gene 3"
species:7955 "Danio rerio" [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0043049 "otic
placode formation" evidence=IGI;IMP] [GO:0007422 "peripheral
nervous system development" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-980526-333
GO:GO:0005634 GO:GO:0051091 GO:GO:0030182 GO:GO:0003677
GO:GO:0007422 GO:GO:0007417 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 OrthoDB:EOG45MN6C GO:GO:0043049
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6658 EMBL:AY316135 EMBL:AB242330
EMBL:AB117960 EMBL:BX088596 EMBL:BC092845 IPI:IPI00551951
RefSeq:NP_001001811.2 UniGene:Dr.104569 ProteinModelPortal:Q6EJB7
SMR:Q6EJB7 STRING:Q6EJB7 Ensembl:ENSDART00000075617 GeneID:30529
KEGG:dre:30529 InParanoid:Q6EJB7 OMA:NNSANDP NextBio:20806912
ArrayExpress:Q6EJB7 Bgee:Q6EJB7 Uniprot:Q6EJB7
Length = 300
Score = 169 (64.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 54 SLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
S+ G G +DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L
Sbjct: 20 SVTG-GKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTD 78
Query: 114 EEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
EK+ + + A ++ H K HP++K+ + +RK+ T
Sbjct: 79 AEKRPFIDEAKRLRAMHMKEHPDYKY--RPRRKTKT 112
>UNIPROTKB|A4IIJ8 [details] [associations]
symbol:sox10 "Transcription factor Sox-10" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0014029 "neural crest
formation" evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0030318 "melanocyte differentiation" evidence=ISS] [GO:0032183
"SUMO binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0001755 GO:GO:0006351 GO:GO:0019899
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0010628 GO:GO:0014044 GO:GO:0030318 GO:GO:0048709
GO:GO:0050768 GO:GO:0048484 GO:GO:0048840 GO:GO:0048752
GO:GO:0032183 GO:GO:0071600 GO:GO:0014029 CTD:6663 eggNOG:NOG295709
GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876 KO:K09270
OrthoDB:EOG41C6WH InterPro:IPR022151 Pfam:PF12444 EMBL:BC136047
RefSeq:NP_001093691.1 UniGene:Str.9225 ProteinModelPortal:A4IIJ8
SMR:A4IIJ8 STRING:A4IIJ8 Ensembl:ENSXETT00000013902
GeneID:100101700 KEGG:xtr:100101700 Xenbase:XB-GENE-480304
OMA:STSHYTE Bgee:A4IIJ8 Uniprot:A4IIJ8
Length = 436
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 46/174 (26%), Positives = 86/174 (49%)
Query: 6 PHKYKKGDIVTTPTGIRKKFNGKQWR-RLCSKDGCSKESQRRGYCSRHLSLKGAGSATGL 64
PH + D T ++K+ + + R +C ++ S+ + + ++ G G
Sbjct: 29 PHAHSSPDD-DEETKVKKEQDSEDERFPVCIREAVSQVLSGYDWTLVPMPVRVNG---GS 84
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 85 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAE 144
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENS 178
++ H K HP++K+ + ++ G G GS + EG H++NS
Sbjct: 145 RLRMQHKKDHPDYKYQPRRRKNGKPNPGEGD-GSSE---AEGGAASIQAHYKNS 194
>UNIPROTKB|P40618 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011
HOVERGEN:HBG009000 UniGene:Gga.4513 CTD:3149 KO:K11296 EMBL:X63463
IPI:IPI00580706 PIR:S22359 RefSeq:NP_990626.2
ProteinModelPortal:P40618 SMR:P40618 STRING:P40618 GeneID:396232
KEGG:gga:396232 NextBio:20816284 Uniprot:P40618
Length = 202
Score = 152 (58.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 7 HKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRH-LSLKGAGSATGLR 65
HK K ++ KK + ++W+ + SK+ + + R+ +K G A G +
Sbjct: 27 HKKKNPEVPVNFAEFSKKCS-ERWKTMSSKEKAKFDEMAKADKVRYDREMKDYGPAKGGK 85
Query: 66 SK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
K + +RP +AF +F R K+ +P V+K LGE W +L EKQ Y+
Sbjct: 86 KKKDPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNK 145
Query: 123 ASEVKEAHFKAHPEWKWCSK-DKRK-SSTGSGRGKLGSMDEGTGEGFMPDD 171
A+++KE + K ++K K D K ++T + R K+ DE E +D
Sbjct: 146 AAKLKEKYEKDVADYKSKGKFDGAKGAATKAARKKVEEEDEEEEEDEEEED 196
>UNIPROTKB|P55863 [details] [associations]
symbol:sox3-a "Transcription factor Sox-3-A" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001704
"formation of primary germ layer" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=IDA] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090090 GO:GO:0008013
GO:GO:0030514 GO:GO:0001704 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 EMBL:AB000825 EMBL:Y07542
EMBL:BC072222 PIR:S22946 RefSeq:NP_001084148.1 UniGene:Xl.22
ProteinModelPortal:P55863 SMR:P55863 GeneID:399335 KEGG:xla:399335
CTD:6658 Xenbase:XB-GENE-484819 Uniprot:P55863
Length = 309
Score = 169 (64.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 34/93 (36%), Positives = 58/93 (62%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G G+A+ L +DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L +K
Sbjct: 28 GKGNASTL-DQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSDK 86
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 87 RPFIDEAKRLRAVHMKDYPDYKY--RPRRKTKT 117
>UNIPROTKB|F1SFJ1 [details] [associations]
symbol:SOX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0061036
"positive regulation of cartilage development" evidence=IEA]
[GO:0060164 "regulation of timing of neuron differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0071560 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0032332
GO:GO:0051216 GO:GO:0048709 GO:GO:0045165 GO:GO:0061036
GO:GO:0060164 GO:GO:0021953 GeneTree:ENSGT00690000101789
GO:GO:2000741 EMBL:CU695217 Ensembl:ENSSSCT00000000610 OMA:GEEPHII
Uniprot:F1SFJ1
Length = 316
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 37 DGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQD 96
DG + S+ R Y +G GS ++ I+RPMNAFM+++K R K+ Q P+
Sbjct: 89 DGSAGVSESRIYRES----RGRGS-----NEPHIKRPMNAFMVWAKDERRKILQAFPDMH 139
Query: 97 NRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL 156
N +SKILG W ++ EKQ Y+E + + + H + +P++K+ + KR + ++
Sbjct: 140 NSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRI 199
Query: 157 G 157
G
Sbjct: 200 G 200
>UNIPROTKB|Q28EW4 [details] [associations]
symbol:sox13 "Transcription factor Sox-13" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
CTD:9580 eggNOG:NOG275089 KO:K09269 HOGENOM:HOG000056455
EMBL:CR762311 RefSeq:NP_001017004.1 UniGene:Str.11026
ProteinModelPortal:Q28EW4 SMR:Q28EW4 Ensembl:ENSXETT00000064129
GeneID:549758 KEGG:xtr:549758 Xenbase:XB-GENE-481889 Bgee:Q28EW4
Uniprot:Q28EW4
Length = 566
Score = 174 (66.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 70 IRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEA 129
I+RPMNAFM+++K R K+ Q P+ N ++SKILG W S+ EKQ Y+E + +
Sbjct: 378 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNAEKQPYYEEQARLSRQ 437
Query: 130 HFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
H + +P++K+ + KR R ++G
Sbjct: 438 HLERYPDYKYKPRPKRTCIVEGKRLRVG 465
>UNIPROTKB|F1NJ38 [details] [associations]
symbol:F1NJ38 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101789 OMA:TMVNCTV EMBL:AADN02044887
EMBL:AADN02044888 IPI:IPI00584532 Ensembl:ENSGALT00000000813
Uniprot:F1NJ38
Length = 491
Score = 173 (66.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 26 NGKQWRRL--CS-KDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSK 82
+G +W R C KDG + R +RH R+ + I+RPMNAFM+++K
Sbjct: 264 SGPRWHRCFPCEGKDGGDTHTPR----TRHFPES--------RNNNHIKRPMNAFMVWAK 311
Query: 83 RHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSK 142
R K+ Q P+ N ++SKIL + W + +EKQ Y+E + + H + +P++K+ +
Sbjct: 312 DERRKILQAFPDMHNSSISKILTQLWGGMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPR 371
Query: 143 DKRKSSTGSGRGKLG 157
KR R ++G
Sbjct: 372 PKRTCIVEGKRLRVG 386
>UNIPROTKB|P40649 [details] [associations]
symbol:sox13 "Transcription factor Sox-13" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:9580 HOVERGEN:HBG003915 KO:K09269 EMBL:D50552
EMBL:BC068647 EMBL:X65655 PIR:S71466 RefSeq:NP_001081238.1
UniGene:Xl.13036 ProteinModelPortal:P40649 SMR:P40649 GeneID:397727
KEGG:xla:397727 Xenbase:XB-GENE-865496 Uniprot:P40649
Length = 567
Score = 174 (66.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 33/90 (36%), Positives = 54/90 (60%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
+ I+RPMNAFM+++K R K+ Q P+ N ++SKILG W S+ EKQ Y+E + +
Sbjct: 390 NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNGEKQPYYEEQARLS 449
Query: 128 EAHFKAHPEWKWCSKDKRKSSTGSGRGKLG 157
H + +P++K+ + KR R ++G
Sbjct: 450 RQHLERYPDYKYKPRPKRTCIVEGKRLRVG 479
>UNIPROTKB|Q3KQ35 [details] [associations]
symbol:sox17a-a "Transcription factor Sox-17-alpha-A"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=IDA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007442
"hindgut morphogenesis" evidence=IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007494 "midgut development"
evidence=IMP] [GO:0008013 "beta-catenin binding" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0008285 GO:GO:0016055 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 GO:GO:0007494 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090090
GO:GO:0008013 GO:GO:0042074 GO:GO:0007492 GO:GO:0007440
GO:GO:0007442 HSSP:P48431 EMBL:AJ001730 EMBL:BC106403 EMBL:AB052690
RefSeq:NP_001081631.1 UniGene:Xl.3831 ProteinModelPortal:Q3KQ35
SMR:Q3KQ35 GeneID:397966 KEGG:xla:397966 CTD:397966
Xenbase:XB-GENE-865067 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 Uniprot:Q3KQ35
Length = 380
Score = 169 (64.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 42/104 (40%), Positives = 62/104 (59%)
Query: 58 AGSATGLRSKD--RIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
AGSA RSK RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W SL E
Sbjct: 48 AGSANS-RSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAE 106
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSM 159
K+ + E A ++ H + HP +K+ + +RK R + G M
Sbjct: 107 KRPFVEEAERLRVQHMQDHPNYKYRPR-RRKQVKRMKRAENGFM 149
Score = 39 (18.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 33 LCSKDG-CSKESQRRGYCSRHLSLKGAG 59
+ S DG + + Q +G CS + + G G
Sbjct: 1 MSSPDGGYASDDQNQGKCSVPIMMTGLG 28
>UNIPROTKB|Q90ZH8 [details] [associations]
symbol:sox18-a "Transcription factor Sox-18A" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48431 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
KO:K09270 EMBL:AB052692 EMBL:BC169575 RefSeq:NP_001082102.1
UniGene:Xl.11958 ProteinModelPortal:Q90ZH8 SMR:Q90ZH8 GeneID:398226
KEGG:xla:398226 CTD:398226 Xenbase:XB-GENE-864957 Uniprot:Q90ZH8
Length = 363
Score = 170 (64.9 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/140 (35%), Positives = 75/140 (53%)
Query: 69 RIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKE 128
RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK+ + E A ++
Sbjct: 67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSVEKRPFVEEAERLRV 126
Query: 129 AHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT---GEGF---MPD-DLEHFENSLEM 181
H + HP +K+ + K+++ KL MD EGF P +L HF N L
Sbjct: 127 QHLQDHPNYKYRPRRKKQAK------KLKRMDPSPLLRNEGFTRGQPMVNLSHFRN-LHP 179
Query: 182 VTSSNETTVQYLLHPTGRLS 201
+ S E Y L PT +S
Sbjct: 180 LGGSGELE-SYGL-PTPEMS 197
>ZFIN|ZDB-GENE-081120-6 [details] [associations]
symbol:sox6 "SRY-box containing gene 6" species:7955
"Danio rerio" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505
ZFIN:ZDB-GENE-081120-6 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
PANTHER:PTHR10270:SF89 EMBL:BX537340 EMBL:BX936464 EMBL:BX936427
IPI:IPI01024072 Ensembl:ENSDART00000150068 ArrayExpress:F8W2H3
Bgee:F8W2H3 Uniprot:F8W2H3
Length = 785
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 51/208 (24%), Positives = 99/208 (47%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
++ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E +
Sbjct: 572 NEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPYYEEQAR 631
Query: 126 VKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSS 185
+ + H + +P +K+ + KR + ++ + + + F + T
Sbjct: 632 LSKIHLEKYPNYKYKPRPKRTCIIDGKKLRISEYKQMM-RSRRQEMRQFFTVGQQPQTQI 690
Query: 186 NETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVK-QPTTPTVIVSKQSNIEMQNASVA 244
TT +++P G ++ +T S S + +PT P ++ N++M+ ++
Sbjct: 691 PITTSAGVVYP-GAITMATTTPSPHMTSDCSSASASPEPTIP--VIQSTFNMKMEPGTMV 747
Query: 245 ---AANAELMQQADKNKDSEQQKYRNFN 269
A N E + D +D E + +++
Sbjct: 748 PSDAVNGE--DEMDMYEDFEDEPKSDYS 773
>UNIPROTKB|P57073 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0046533 "negative regulation of photoreceptor
cell differentiation" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0001755
"neural crest cell migration" evidence=ISS] [GO:0014015 "positive
regulation of gliogenesis" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0048484 "enteric
nervous system development" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0001649 "osteoblast differentiation"
evidence=ISS] [GO:0001701 "in utero embryonic development"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0007422 "peripheral nervous system development" evidence=ISS]
[GO:0010817 "regulation of hormone levels" evidence=ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISS] [GO:0045444 "fat cell differentiation" evidence=ISS]
[GO:0045165 "cell fate commitment" evidence=ISS] [GO:0060009
"Sertoli cell development" evidence=ISS] [GO:0048709
"oligodendrocyte differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0061138 "morphogenesis
of a branching epithelium" evidence=ISS] [GO:0072197 "ureter
morphogenesis" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0090184
"positive regulation of kidney development" evidence=ISS]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=ISS] [GO:0060612 "adipose
tissue development" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0007422
GO:GO:0060612 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060009 GO:GO:0090190 GO:GO:0001649 GO:GO:0045444
GO:GO:0000979 GO:GO:0048709 GO:GO:0048484 GO:GO:0010817
GO:GO:0048469 GO:GO:0033690 GO:GO:0045662 GO:GO:0046533
EMBL:AE006465 GO:GO:0060018 GO:GO:0014015 GO:GO:0072289
GO:GO:0072197 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 CTD:30812 eggNOG:NOG324597
OrthoDB:EOG4ZKJMD EMBL:AF226675 EMBL:Z99757 EMBL:BC031797
EMBL:AF164104 IPI:IPI00299069 RefSeq:NP_055402.2 UniGene:Hs.243678
ProteinModelPortal:P57073 SMR:P57073 IntAct:P57073 STRING:P57073
PhosphoSite:P57073 DMDM:10720294 PRIDE:P57073
Ensembl:ENST00000293894 GeneID:30812 KEGG:hsa:30812 UCSC:uc002ckn.3
GeneCards:GC16P001033 HGNC:HGNC:11203 HPA:HPA041640 MIM:605923
neXtProt:NX_P57073 PharmGKB:PA36040 InParanoid:P57073 OMA:DQSHGSP
PhylomeDB:P57073 ChiTaRS:SOX8 GenomeRNAi:30812 NextBio:52860
Bgee:P57073 CleanEx:HS_SOX8 Genevestigator:P57073
GermOnline:ENSG00000005513 GO:GO:0061138 GO:GO:0072034
GO:GO:0060221 Uniprot:P57073
Length = 446
Score = 171 (65.3 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 35/125 (28%), Positives = 67/125 (53%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHP 93
C +D S+ + + + ++G G L++K ++RPMNAFM++++ R K+ +P
Sbjct: 67 CIRDAVSQVLKGYDWSLVPMPVRGGGGGA-LKAKPHVKRPMNAFMVWAQAARRKLADQYP 125
Query: 94 NQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
+ N +SK LG+ W L EK+ + E A ++ H K HP++K+ + ++ + G
Sbjct: 126 HLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSD 185
Query: 154 GKLGS 158
G+
Sbjct: 186 SDSGA 190
Score = 39 (18.8 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 231 SKQSNIEMQNASVAAANAELMQQADKNKDSEQQKY 265
S + NI+ N ++ ++E+M D E +Y
Sbjct: 254 SGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQY 288
>UNIPROTKB|A7E3Q4 [details] [associations]
symbol:HBP1 "HMG box-containing protein 1" species:9913
"Bos taurus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR003652 InterPro:IPR013723
Pfam:PF08517 PROSITE:PS51148 SMART:SM00536 Pfam:PF00505
GO:GO:0003723 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 SUPFAM:SSF102031 IPI:IPI00686846 UniGene:Bt.51416
HOVERGEN:HBG052810 OMA:CCEIHIG GeneTree:ENSGT00390000011239
EMBL:DAAA02010577 EMBL:DAAA02010578 EMBL:DAAA02010579
EMBL:DAAA02010580 EMBL:DAAA02010581 EMBL:BT030675 SMR:A7E3Q4
STRING:A7E3Q4 Ensembl:ENSBTAT00000007265 Uniprot:A7E3Q4
Length = 512
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 41/127 (32%), Positives = 71/127 (55%)
Query: 25 FNGKQWRRLCSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRH 84
F + + C G S+ S Y ++ + +G+ + S ++ +RPMNAFM+F+K++
Sbjct: 389 FERSGFSKNCGSPGSSQLSSSSLY-AKAVKTHSSGTVSAT-SPNKCKRPMNAFMLFAKKY 446
Query: 85 RAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDK 144
R + Q++P +DNR +S ILG+ W + EE++ Y A + E + +P+ C K K
Sbjct: 447 RVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPD---CWKRK 503
Query: 145 RKSSTGS 151
R +S GS
Sbjct: 504 RTNS-GS 509
>UNIPROTKB|Q2KJ34 [details] [associations]
symbol:HBP1 "HMG box-containing protein 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR003652 InterPro:IPR013723
Pfam:PF08517 PROSITE:PS51148 SMART:SM00536 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0016055 GO:GO:0003677
GO:GO:0006351 GO:GO:0003723 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 SUPFAM:SSF102031 EMBL:BC105542
IPI:IPI00686846 UniGene:Bt.51416 ProteinModelPortal:Q2KJ34
SMR:Q2KJ34 STRING:Q2KJ34 PRIDE:Q2KJ34 eggNOG:NOG149693
HOGENOM:HOG000065753 HOVERGEN:HBG052810 NextBio:20871765
Uniprot:Q2KJ34
Length = 512
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 41/127 (32%), Positives = 71/127 (55%)
Query: 25 FNGKQWRRLCSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRH 84
F + + C G S+ S Y ++ + +G+ + S ++ +RPMNAFM+F+K++
Sbjct: 389 FERSGFSKNCGSPGSSQLSSSSLY-AKAVKTHSSGTVSAT-SPNKCKRPMNAFMLFAKKY 446
Query: 85 RAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDK 144
R + Q++P +DNR +S ILG+ W + EE++ Y A + E + +P+ C K K
Sbjct: 447 RVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPD---CWKRK 503
Query: 145 RKSSTGS 151
R +S GS
Sbjct: 504 RTNS-GS 509
>UNIPROTKB|Q8AXX8 [details] [associations]
symbol:sox10 "Transcription factor Sox-10" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0014029 "neural crest formation"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0032183
"SUMO binding" evidence=IPI] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030318 GO:GO:0014029
HSSP:P48431 CTD:6663 KO:K09270 InterPro:IPR022151 Pfam:PF12444
EMBL:AY149116 EMBL:AY157667 EMBL:BC170062 RefSeq:NP_001082358.1
UniGene:Xl.1588 ProteinModelPortal:Q8AXX8 SMR:Q8AXX8 GeneID:398422
KEGG:xla:398422 Xenbase:XB-GENE-865362 Uniprot:Q8AXX8
Length = 446
Score = 171 (65.3 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 63 GLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
G +SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E
Sbjct: 91 GSKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEE 150
Query: 123 ASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENS 178
A ++ H K HP++K+ + ++ G G GS + EG H++NS
Sbjct: 151 AERLRMQHKKDHPDYKYQPRRRKNGKPSPGEGD-GSSE---AEGGAASIQAHYKNS 202
>UNIPROTKB|O60381 [details] [associations]
symbol:HBP1 "HMG box-containing protein 1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0043268 "positive
regulation of potassium ion transport" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=NAS] InterPro:IPR009071 InterPro:IPR003652
InterPro:IPR013723 Pfam:PF08517 PROSITE:PS51148 SMART:SM00536
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 Pathway_Interaction_DB:p38alphabetadownstreampathway
GO:GO:0007050 GO:GO:0006351 GO:GO:0003723 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 EMBL:CH471070
SUPFAM:SSF102031 eggNOG:NOG149693 HOVERGEN:HBG052810 EMBL:AF182038
EMBL:AK074353 EMBL:AK122785 EMBL:AC004492 EMBL:BC017069
EMBL:BC022329 IPI:IPI00099615 IPI:IPI00550468 IPI:IPI00607765
RefSeq:NP_001231191.1 RefSeq:NP_036389.2 UniGene:Hs.162032 PDB:2E6O
PDB:3QVE PDBsum:2E6O PDBsum:3QVE ProteinModelPortal:O60381
SMR:O60381 IntAct:O60381 MINT:MINT-1185770 STRING:O60381
PhosphoSite:O60381 PaxDb:O60381 PRIDE:O60381 DNASU:26959
Ensembl:ENST00000222574 Ensembl:ENST00000468410
Ensembl:ENST00000485846 GeneID:26959 KEGG:hsa:26959 UCSC:uc003vdy.3
UCSC:uc003veb.1 CTD:26959 GeneCards:GC07P106809 HGNC:HGNC:23200
HPA:CAB032824 neXtProt:NX_O60381 PharmGKB:PA134901346
InParanoid:O60381 OMA:CCEIHIG OrthoDB:EOG4KKZ36 PhylomeDB:O60381
ChiTaRS:HBP1 EvolutionaryTrace:O60381 GenomeRNAi:26959
NextBio:49416 ArrayExpress:O60381 Bgee:O60381 CleanEx:HS_HBP1
Genevestigator:O60381 GermOnline:ENSG00000105856 Uniprot:O60381
Length = 514
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 42/119 (35%), Positives = 66/119 (55%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSAT-GLRSKDRIRRPMNAFMIFSKRHRAKVHQIH 92
C G S+ S Y ++K S T S ++ +RPMNAFM+F+K++R + Q++
Sbjct: 400 CGSPGSSQLSSNSLYAK---AVKNHSSGTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMY 456
Query: 93 PNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGS 151
P +DNR +S ILG+ W + EE++ Y A + E + +P+ C K KR +S GS
Sbjct: 457 PGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPD---CWKRKRTNS-GS 511
>UNIPROTKB|E2RRE1 [details] [associations]
symbol:HBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR003652 InterPro:IPR013723
Pfam:PF08517 PROSITE:PS51148 SMART:SM00536 Pfam:PF00505
GO:GO:0003723 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 SUPFAM:SSF102031 CTD:26959 OMA:CCEIHIG
GeneTree:ENSGT00390000011239 EMBL:AAEX03011216 EMBL:AAEX03011215
RefSeq:XP_848983.1 Ensembl:ENSCAFT00000006332 GeneID:475886
KEGG:cfa:475886 Uniprot:E2RRE1
Length = 522
Score = 172 (65.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 42/119 (35%), Positives = 66/119 (55%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSAT-GLRSKDRIRRPMNAFMIFSKRHRAKVHQIH 92
C G S+ S Y ++K S T S ++ +RPMNAFM+F+K++R + Q++
Sbjct: 408 CGSPGSSQLSSNSLYAK---AVKNHSSGTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMY 464
Query: 93 PNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGS 151
P +DNR +S ILG+ W + EE++ Y A + E + +P+ C K KR +S GS
Sbjct: 465 PGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPD---CWKRKRTNS-GS 519
>UNIPROTKB|Q5FWM3 [details] [associations]
symbol:sox3-b "Transcription factor Sox-3-B" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001704
"formation of primary germ layer" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008013 "beta-catenin binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0008013
GO:GO:0001704 HSSP:P48432 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:BC089283 EMBL:X65654 RefSeq:NP_001166875.1
UniGene:Xl.37985 ProteinModelPortal:Q5FWM3 SMR:Q5FWM3 GeneID:398329
KEGG:xla:398329 CTD:398329 Uniprot:Q5FWM3
Length = 307
Score = 167 (63.8 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G G+ T +DR++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK
Sbjct: 28 GKGN-TSTPDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEK 86
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 87 RPFIDEAKRLRAVHMKDYPDYKY--RPRRKTKT 117
>UNIPROTKB|Q68FA4 [details] [associations]
symbol:sox3 "Transcription factor Sox-3" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0001704 "formation of primary germ layer" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0051091 GO:GO:0030182 GO:GO:0043565
GO:GO:0007422 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0008013 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 OrthoDB:EOG45MN6C GO:GO:0043049
GO:GO:0001704 HSSP:P48432 HOGENOM:HOG000231647 KO:K09267
InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658
EMBL:BC079938 RefSeq:NP_001007502.1 UniGene:Str.27268
ProteinModelPortal:Q68FA4 SMR:Q68FA4 STRING:Q68FA4
Ensembl:ENSXETT00000016558 GeneID:493228 KEGG:xtr:493228
Xenbase:XB-GENE-484815 InParanoid:Q68FA4 OMA:PDPPAHR Bgee:Q68FA4
Uniprot:Q68FA4
Length = 307
Score = 167 (63.8 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G G+A+ + ++R++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK
Sbjct: 28 GKGNAS-IPDQERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEK 86
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 87 RPFIDEAKRLRAVHMKEYPDYKY--RPRRKTKT 117
>UNIPROTKB|P36402 [details] [associations]
symbol:TCF7 "Transcription factor 7" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0021915 "neural tube development" evidence=IEA] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IEA] [GO:0033153 "T
cell receptor V(D)J recombination" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0046632
"alpha-beta T cell differentiation" evidence=IEA] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IEA] [GO:0048619
"embryonic hindgut morphogenesis" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IBA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IBA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IBA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IBA] [GO:0007420 "brain
development" evidence=IBA] [GO:0008013 "beta-catenin binding"
evidence=IDA;IBA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IBA] [GO:0022008 "neurogenesis" evidence=IBA] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0048699
"generation of neurons" evidence=IBA] [GO:0060070 "canonical Wnt
receptor signaling pathway" evidence=IBA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071353 "cellular response to interleukin-4" evidence=IDA]
[GO:0006955 "immune response" evidence=TAS] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0007420 GO:GO:0006955
GO:GO:0042981 EMBL:CH471062 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
GO:GO:0042127 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0021915 GO:GO:0008013
GO:GO:0046632 GO:GO:0060070 GO:GO:0033153 GO:GO:0048619
GO:GO:0048699 GO:GO:0071353 GO:GO:0048557 GO:GO:0030538
HOGENOM:HOG000116032 HOVERGEN:HBG000419 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916 EMBL:X59869
EMBL:X59870 EMBL:X59871 EMBL:X63901 EMBL:Z47361 EMBL:Z47362
EMBL:Z47363 EMBL:Z47364 EMBL:AK093530 EMBL:BC048769 EMBL:BC072023
EMBL:AF163776 IPI:IPI00003325 IPI:IPI00219960 IPI:IPI00219961
IPI:IPI00219962 IPI:IPI00219964 IPI:IPI00219965 IPI:IPI00334125
IPI:IPI00385101 IPI:IPI00402002 IPI:IPI00477092 IPI:IPI00477635
IPI:IPI00478219 IPI:IPI00478950 IPI:IPI00478992 IPI:IPI00479370
IPI:IPI00479759 PIR:A38095 PIR:B38095 PIR:C38095 PIR:D38095
PIR:S61796 RefSeq:NP_001128323.2 RefSeq:NP_003193.2
RefSeq:NP_963963.1 RefSeq:NP_963965.1 RefSeq:NP_998813.1
UniGene:Hs.573153 ProteinModelPortal:P36402 SMR:P36402
IntAct:P36402 MINT:MINT-1779551 STRING:P36402 PhosphoSite:P36402
DMDM:209572716 PRIDE:P36402 DNASU:6932 Ensembl:ENST00000321584
Ensembl:ENST00000321603 Ensembl:ENST00000342854
Ensembl:ENST00000378560 Ensembl:ENST00000378564
Ensembl:ENST00000395023 Ensembl:ENST00000518915
Ensembl:ENST00000520958 GeneID:6932 KEGG:hsa:6932 UCSC:uc003kyt.3
UCSC:uc003kyu.2 UCSC:uc003kyv.3 UCSC:uc003kyw.3 UCSC:uc003kza.3
CTD:6932 GeneCards:GC05P133478 HGNC:HGNC:11639 HPA:CAB019403
MIM:189908 neXtProt:NX_P36402 PharmGKB:PA36392 KO:K02620
BindingDB:P36402 ChEMBL:CHEMBL1075124 ChiTaRS:TCF7 GenomeRNAi:6932
NextBio:27121 ArrayExpress:P36402 Bgee:P36402 CleanEx:HS_TCF7
Genevestigator:P36402 GermOnline:ENSG00000081059 Uniprot:P36402
Length = 384
Score = 169 (64.5 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 43/138 (31%), Positives = 73/138 (52%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R+L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 250 RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 309
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPD 170
L EE+ KY+ELA + ++ H + +P W ++D R K E T E P
Sbjct: 310 LSREEQAKYYELARKERQLHMQLYPGWS--ARDNYGKKKRRSREK---HQESTTETNWPR 364
Query: 171 DLE--HFENSLEMVTSSN 186
+L+ + + SL M +SS+
Sbjct: 365 ELKDGNGQESLSMSSSSS 382
>UNIPROTKB|E1C2B1 [details] [associations]
symbol:HBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR013723 Pfam:PF08517 PROSITE:PS51148 Pfam:PF00505
GO:GO:0003723 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 SUPFAM:SSF102031 CTD:26959 OMA:CCEIHIG
GeneTree:ENSGT00390000011239 EMBL:AADN02036859 IPI:IPI00575798
RefSeq:NP_001186383.1 UniGene:Gga.11573 Ensembl:ENSGALT00000013062
GeneID:417705 KEGG:gga:417705 NextBio:20820962 Uniprot:E1C2B1
Length = 517
Score = 169 (64.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 36/95 (37%), Positives = 57/95 (60%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G S S ++ +RPMNAFM+F+K++R + Q++P +DNR +S ILG+ W + EE+
Sbjct: 424 GTASTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEER 483
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGS 151
+ Y A + E + +P+ C K KR +S GS
Sbjct: 484 RMYTLEAKALAEEQKRLNPD---CWKRKRTNS-GS 514
Score = 42 (19.8 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 32 RLCSKDGCSKESQ 44
RLC GC+KE Q
Sbjct: 219 RLCFHKGCNKEWQ 231
>UNIPROTKB|F1N1F9 [details] [associations]
symbol:SOX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA] [GO:2000035 "regulation of stem cell division"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA] [GO:0072001 "renal system
development" evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0061010 "gall bladder development"
evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060913 "cardiac cell fate determination"
evidence=IEA] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IEA]
[GO:0042074 "cell migration involved in gastrulation" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007493 "endodermal cell fate determination" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003308 "negative
regulation of Wnt receptor signaling pathway involved in heart
development" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 CTD:64321 OMA:ALPCRDG GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
EMBL:DAAA02038302 IPI:IPI00687993 RefSeq:NP_001193180.1
UniGene:Bt.112292 Ensembl:ENSBTAT00000007553 GeneID:534010
KEGG:bta:534010 NextBio:20876231 Uniprot:F1N1F9
Length = 410
Score = 163 (62.4 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 58 AGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
AG A + + RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK+
Sbjct: 56 AGPAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKR 115
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRK 146
+ E A ++ H + HP +K+ + +RK
Sbjct: 116 PFVEEAERLRVQHMQDHPNYKYRPR-RRK 143
Score = 45 (20.9 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 300 DSGAPNVPYQRSHEMDTS---EPPGGGQENKGTGPQ 332
D AP PY + D + EPPG G + GP+
Sbjct: 244 DCPAPG-PYSYAPAADYAGPPEPPGAGPLHPRLGPE 278
Score = 38 (18.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 302 GAPNVPYQRSHEMDTSEPPGGGQENKGTGPQT 333
G P+ P + H D++EP G E G +T
Sbjct: 327 GQPSPPPEALHCRDSAEP-GAPAELLGEVERT 357
>RGD|1583621 [details] [associations]
symbol:Tcf7l2 "transcription factor 7-like 2 (T-cell specific,
HMG-box)" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO;IBA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IBA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO;IBA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IBA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IBA] [GO:0007050 "cell cycle arrest"
evidence=ISO] [GO:0007420 "brain development" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IBA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO] [GO:0010909 "positive regulation of heparan sulfate
proteoglycan biosynthetic process" evidence=ISO] [GO:0014003
"oligodendrocyte development" evidence=ISO] [GO:0016055 "Wnt
receptor signaling pathway" evidence=ISO;IBA] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0021915 "neural tube development"
evidence=ISO] [GO:0021983 "pituitary gland development"
evidence=ISO] [GO:0022008 "neurogenesis" evidence=IBA] [GO:0030282
"bone mineralization" evidence=ISO] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=ISO] [GO:0030538
"embryonic genitalia morphogenesis" evidence=ISO] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0032024 "positive
regulation of insulin secretion" evidence=ISO] [GO:0032092
"positive regulation of protein binding" evidence=ISO] [GO:0032252
"secretory granule localization" evidence=ISO] [GO:0032350
"regulation of hormone metabolic process" evidence=ISO] [GO:0032993
"protein-DNA complex" evidence=ISO] [GO:0035019 "somatic stem cell
maintenance" evidence=ISO] [GO:0035257 "nuclear hormone receptor
binding" evidence=ISO] [GO:0035411 "catenin import into nucleus"
evidence=ISO] [GO:0040037 "negative regulation of fibroblast growth
factor receptor signaling pathway" evidence=ISO] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISO]
[GO:0042593 "glucose homeostasis" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IBA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=ISO]
[GO:0043588 "skin development" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IBA]
[GO:0044334 "canonical Wnt receptor signaling pathway involved in
positive regulation of epithelial to mesenchymal transition"
evidence=ISO] [GO:0045295 "gamma-catenin binding" evidence=ISO]
[GO:0045444 "fat cell differentiation" evidence=ISO] [GO:0045599
"negative regulation of fat cell differentiation" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046621 "negative regulation of organ growth" evidence=ISO]
[GO:0046827 "positive regulation of protein export from nucleus"
evidence=ISO] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=ISO] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=ISO] [GO:0048625 "myoblast cell fate commitment"
evidence=ISO] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0048660 "regulation of smooth muscle
cell proliferation" evidence=ISO] [GO:0048699 "generation of
neurons" evidence=IBA] [GO:0048713 "regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISO] [GO:0051897 "positive
regulation of protein kinase B signaling cascade" evidence=ISO]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IBA] [GO:0060325 "face morphogenesis" evidence=ISO]
[GO:0061178 "regulation of insulin secretion involved in cellular
response to glucose stimulus" evidence=ISO;IMP] [GO:0070016
"armadillo repeat domain binding" evidence=ISO] [GO:0070369
"beta-catenin-TCF7L2 complex" evidence=ISO] [GO:0071664
"catenin-TCF7L2 complex" evidence=ISO] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISO] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
RGD:1583621 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0008013
GO:GO:0060070 GO:GO:0061178 GO:GO:0048699 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 IPI:IPI00202300
Ensembl:ENSRNOT00000019655 UCSC:RGD:1583621 ArrayExpress:D4A9H4
Uniprot:D4A9H4
Length = 459
Score = 169 (64.5 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 38/116 (32%), Positives = 64/116 (55%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + G+ + K I++P+NAFM++ K RAKV +++ +
Sbjct: 298 QESSQSDVGSLHSSKRLFGTREEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 357
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 358 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 413
>UNIPROTKB|P40647 [details] [associations]
symbol:sox5 "Transcription factor Sox-5" species:8355
"Xenopus laevis" [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0090263 HOVERGEN:HBG003915 KO:K09269 CTD:6660
EMBL:BC142559 EMBL:DR718509 EMBL:X65653 PIR:S22949
RefSeq:NP_001167508.1 UniGene:Xl.21446 UniGene:Xl.85854
GeneID:100381154 KEGG:xla:100381154 Xenbase:XB-GENE-865667
Uniprot:P40647
Length = 757
Score = 172 (65.6 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 41/121 (33%), Positives = 67/121 (55%)
Query: 37 DGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQD 96
DG + S+ R Y R +G GS ++ I+RPMNAFM+++K R K+ Q P+
Sbjct: 535 DGSAGISESRIY--REA--RGRGS-----NEPHIKRPMNAFMVWAKDERRKILQAFPDMH 585
Query: 97 NRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL 156
N +SKILG W S+ EKQ Y+E + + + H + +P++K+ + KR + ++
Sbjct: 586 NSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRI 645
Query: 157 G 157
G
Sbjct: 646 G 646
>UNIPROTKB|F1MAJ5 [details] [associations]
symbol:Sox6 "Protein Sox6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505 RGD:1309000
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101789 PANTHER:PTHR10270:SF89 IPI:IPI00371181
Ensembl:ENSRNOT00000048020 ArrayExpress:F1MAJ5 Uniprot:F1MAJ5
Length = 789
Score = 172 (65.6 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 54/211 (25%), Positives = 99/211 (46%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEW--WYSLGPEEKQKYHELA 123
S+ I+RPMNAFM+++K R K+ Q P+ N +SKILG W S+ +EKQ Y+E
Sbjct: 576 SEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGNGSRWKSMSNQEKQPYYEEQ 635
Query: 124 SEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVT 183
+ + + H + +P +K+ + KR + ++G + ++ F ++
Sbjct: 636 ARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRS--RRQEMRQFF-TVGQQP 692
Query: 184 SSNETTVQYLLHPTGRLSNIYSTGF-QIPISSESLGNVKQPTTPTVIVSKQSNIEMQNAS 242
TT +++P G ++ +T Q+ S +P+ P ++ ++M AS
Sbjct: 693 QIPITTGTGVVYP-GAITMATTTPSPQMTSDCSSTSASPEPSLP--VIQSTYGMKMDGAS 749
Query: 243 VAA---ANAE-LMQQADKNKDSEQQKYRNFN 269
+A N E M+ D +D + Y + N
Sbjct: 750 LAGNDMINGEDEMEAYDDYEDDPKSDYSSEN 780
>RGD|620474 [details] [associations]
symbol:Sox9 "SRY-box containing gene 9" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO;IDA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IDA] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001502 "cartilage
condensation" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001894 "tissue homeostasis" evidence=IMP]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IMP;IDA] [GO:0001942 "hair follicle development"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002063 "chondrocyte development"
evidence=IMP] [GO:0002683 "negative regulation of immune system
process" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
[GO:0003188 "heart valve formation" evidence=IMP] [GO:0003203
"endocardial cushion morphogenesis" evidence=IMP] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISO] [GO:0003415 "chondrocyte hypertrophy"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO;IMP;IDA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISO;IDA]
[GO:0004672 "protein kinase activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=ISO] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IGI]
[GO:0007507 "heart development" evidence=IMP] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0008584 "male gonad development" evidence=ISO;IGI;IMP]
[GO:0010564 "regulation of cell cycle process" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=IGI]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019100
"male germ-line sex determination" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IMP] [GO:0030198 "extracellular matrix
organization" evidence=IMP] [GO:0030238 "male sex determination"
evidence=IGI] [GO:0030279 "negative regulation of ossification"
evidence=IMP] [GO:0030502 "negative regulation of bone
mineralization" evidence=IMP] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISO;IMP;IDA]
[GO:0034236 "protein kinase A catalytic subunit binding"
evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035326 "enhancer binding" evidence=ISO;IDA]
[GO:0035622 "intrahepatic bile duct development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043491 "protein kinase B signaling cascade" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045595 "regulation of cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051216 "cartilage development"
evidence=IEP;IMP;TAS] [GO:0060008 "Sertoli cell differentiation"
evidence=IMP] [GO:0060009 "Sertoli cell development" evidence=IGI]
[GO:0060018 "astrocyte fate commitment" evidence=IGI] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0060221
"retinal rod cell differentiation" evidence=IGI] [GO:0060350
"endochondral bone morphogenesis" evidence=IMP] [GO:0060512
"prostate gland morphogenesis" evidence=IMP] [GO:0060517
"epithelial cell proliferation involved in prostatic bud
elongation" evidence=IMP] [GO:0060729 "intestinal epithelial
structure maintenance" evidence=IMP] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISO;IDA] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=IGI] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=IMP] [GO:0070371 "ERK1 and
ERK2 cascade" evidence=IDA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=IDA] [GO:0071364 "cellular response to
epidermal growth factor stimulus" evidence=IDA] [GO:0071504
"cellular response to heparin" evidence=IDA] [GO:0071560 "cellular
response to transforming growth factor beta stimulus" evidence=ISO]
[GO:0072034 "renal vesicle induction" evidence=IMP] [GO:0072197
"ureter morphogenesis" evidence=IGI] [GO:0072289 "metanephric
nephron tubule formation" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IDA] [GO:0090103 "cochlea morphogenesis" evidence=IMP]
[GO:0090184 "positive regulation of kidney development"
evidence=IGI] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:2000020
"positive regulation of male gonad development" evidence=ISO]
[GO:2000138 "positive regulation of cell proliferation involved in
heart morphogenesis" evidence=IMP] [GO:2000741 "positive regulation
of mesenchymal stem cell differentiation" evidence=ISO]
InterPro:IPR009071 Pfam:PF00505 RGD:620474 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0051216 InterPro:IPR022151 Pfam:PF12444 HSSP:P48432
IPI:IPI00392284 EMBL:AB073720 UniGene:Rn.95086
ProteinModelPortal:Q91WY3 STRING:Q91WY3 HOVERGEN:HBG098066
Genevestigator:Q91WY3 Uniprot:Q91WY3
Length = 164
Score = 147 (56.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 85 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 144
Query: 125 EVKEAHFKAHPEWKW 139
++ H K HP++K+
Sbjct: 145 RLRVQHRKDHPDYKY 159
>ZFIN|ZDB-GENE-040429-1 [details] [associations]
symbol:sox21b "SRY-box containing gene 21 b"
species:7955 "Danio rerio" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-040429-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00690000101940 HSSP:P48431
eggNOG:NOG302715 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 OrthoDB:EOG40K80Q OMA:KPKTLMK EMBL:AY489186
EMBL:CT027987 EMBL:BC095366 IPI:IPI00492387 RefSeq:NP_001009888.1
UniGene:Dr.116538 ProteinModelPortal:Q6RVD7 SMR:Q6RVD7
STRING:Q6RVD7 PRIDE:Q6RVD7 Ensembl:ENSDART00000003310 GeneID:406246
KEGG:dre:406246 CTD:406246 InParanoid:Q6RVD7 NextBio:20817881
Bgee:Q6RVD7 Uniprot:Q6RVD7
Length = 245
Score = 160 (61.4 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D ++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A ++
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKSST 149
H K HP++K+ + +RK T
Sbjct: 66 AMHMKEHPDYKY--RPRRKPKT 85
>UNIPROTKB|F1P1Z5 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9031
"Gallus gallus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007422 "peripheral nervous system development"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010817 "regulation of hormone levels"
evidence=IEA] [GO:0014015 "positive regulation of gliogenesis"
evidence=IEA] [GO:0033690 "positive regulation of osteoblast
proliferation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0060009
"Sertoli cell development" evidence=IEA] [GO:0060018 "astrocyte
fate commitment" evidence=IEA] [GO:0060221 "retinal rod cell
differentiation" evidence=IEA] [GO:0060612 "adipose tissue
development" evidence=IEA] [GO:0061138 "morphogenesis of a
branching epithelium" evidence=IEA] [GO:0072034 "renal vesicle
induction" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0007165 GO:GO:0043066 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0090190 GO:GO:0045444 GO:GO:0000979
GO:GO:0010817 GO:GO:0033690 GO:GO:0045662
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
IPI:IPI00593054 OMA:DQSHGSP GO:GO:0072034 EMBL:AADN02023690
Ensembl:ENSGALT00000008449 Uniprot:F1P1Z5
Length = 470
Score = 169 (64.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 37/120 (30%), Positives = 69/120 (57%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHP 93
C +D S+ + + + ++G GS L++K ++RPMNAFM++++ R K+ +P
Sbjct: 76 CIRDAVSQVLKGYDWSLVPMPVRGNGS---LKAKPHVKRPMNAFMVWAQAARRKLADQYP 132
Query: 94 NQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
+ N +SK LG+ W L EK+ + E A ++ H K HP++K+ + +R+ S +G+
Sbjct: 133 HLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKY--QPRRRKSVKAGQ 190
Score = 38 (18.4 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 8/42 (19%), Positives = 20/42 (47%)
Query: 228 VIVSKQSNIEMQNASVAAANAELMQQADKNKDSEQQKYRNFN 269
++ S + NI+ N ++ ++E++ + E +Y N
Sbjct: 259 LVESGRQNIDFSNVDISELSSEVINNMETFDVHEFDQYLPLN 300
>UNIPROTKB|P57074 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0048709 GO:GO:0003170 HOGENOM:HOG000108876 HOVERGEN:HBG002061
KO:K09270 InterPro:IPR022151 Pfam:PF12444 EMBL:AF228664
IPI:IPI00593054 RefSeq:NP_990062.1 UniGene:Gga.4309
ProteinModelPortal:P57074 SMR:P57074 GeneID:395483 KEGG:gga:395483
CTD:30812 eggNOG:NOG324597 InParanoid:P57074 OrthoDB:EOG4ZKJMD
NextBio:20815563 Uniprot:P57074
Length = 470
Score = 169 (64.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 37/120 (30%), Positives = 69/120 (57%)
Query: 34 CSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHP 93
C +D S+ + + + ++G GS L++K ++RPMNAFM++++ R K+ +P
Sbjct: 76 CIRDAVSQVLKGYDWSLVPMPVRGNGS---LKAKPHVKRPMNAFMVWAQAARRKLADQYP 132
Query: 94 NQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
+ N +SK LG+ W L EK+ + E A ++ H K HP++K+ + +R+ S +G+
Sbjct: 133 HLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKY--QPRRRKSVKAGQ 190
Score = 38 (18.4 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 8/42 (19%), Positives = 20/42 (47%)
Query: 228 VIVSKQSNIEMQNASVAAANAELMQQADKNKDSEQQKYRNFN 269
++ S + NI+ N ++ ++E++ + E +Y N
Sbjct: 259 LVESGRQNIDFSNVDISELSSEVINNMETFDVHEFDQYLPLN 300
>UNIPROTKB|Q8AWH3 [details] [associations]
symbol:sox17a "Transcription factor Sox-17-alpha"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007492 "endoderm development" evidence=ISS]
[GO:0008013 "beta-catenin binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0016055 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0070121 GO:GO:0008013
GO:GO:0007492 GO:GO:0007369 GO:GO:0061371 HSSP:P48431
eggNOG:NOG242943 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 HOGENOM:HOG000069999
OrthoDB:EOG4KD6M5 EMBL:AY157635 EMBL:AC148408 EMBL:CR848309
EMBL:BC074527 RefSeq:NP_989425.1 UniGene:Str.114
ProteinModelPortal:Q8AWH3 SMR:Q8AWH3 STRING:Q8AWH3
Ensembl:ENSXETT00000053697 GeneID:395066 KEGG:xtr:395066 CTD:395066
Xenbase:XB-GENE-484295 InParanoid:Q8AWH3 OMA:FNGHEAN Bgee:Q8AWH3
GO:GO:0035469 Uniprot:Q8AWH3
Length = 383
Score = 165 (63.1 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 38/103 (36%), Positives = 61/103 (59%)
Query: 58 AGSATGL-RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
AGSA +++ RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK
Sbjct: 48 AGSANSRGKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEK 107
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSM 159
+ + E A ++ H + HP +K+ + +RK R G M
Sbjct: 108 RPFVEEAERLRVQHMQDHPNYKYRPR-RRKQVKRMKRADTGFM 149
Score = 39 (18.8 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 33 LCSKDG-CSKESQRRGYCSRHLSLKGAG 59
+ S DG + + Q +G CS + + G G
Sbjct: 1 MSSPDGGYASDDQNQGKCSVPIMMTGLG 28
>UNIPROTKB|F1Q1X7 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AAEX03015533 EMBL:AAEX03015534
EMBL:AAEX03015535 Ensembl:ENSCAFT00000017507 Uniprot:F1Q1X7
Length = 260
Score = 161 (61.7 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 127 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 186
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 187 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 242
>UNIPROTKB|I3LUM5 [details] [associations]
symbol:TCF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071353 "cellular response to interleukin-4"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0046632 "alpha-beta T cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0033153 "T cell receptor V(D)J
recombination" evidence=IEA] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IEA] [GO:0021915 "neural tube development"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0005634 GO:GO:0042981 GO:GO:0016055 GO:GO:0003700
GO:GO:0042127 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0021915 GO:GO:0046632
GO:GO:0033153 GO:GO:0048619 GO:GO:0071353 GO:GO:0048557
GO:GO:0030538 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:HISADIN EMBL:CU694278
Ensembl:ENSSSCT00000023234 Uniprot:I3LUM5
Length = 280
Score = 162 (62.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 40/120 (33%), Positives = 67/120 (55%)
Query: 54 SLKGAGSATGLRS--KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSL 111
SLK + G + K I++P+NAFM++ K RAKV +++ +++ILG W++L
Sbjct: 147 SLKTQAESKGEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 206
Query: 112 GPEEKQKYHELASEVKEAHFKAHPEW---------KWCSKDKRK-SSTGSGRGKLGSMDE 161
EE+ KY+ELA + ++ H + +P W K S++K + S+TG R G+ E
Sbjct: 207 SREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQDSNTGGKRNAFGTYPE 266
>UNIPROTKB|D4A8X6 [details] [associations]
symbol:683733 "Protein 683733" species:10116 "Rattus
norvegicus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
IPI:IPI00196253 Ensembl:ENSRNOT00000019681 ArrayExpress:D4A8X6
Uniprot:D4A8X6
Length = 598
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 38/116 (32%), Positives = 64/116 (55%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + G+ + K I++P+NAFM++ K RAKV +++ +
Sbjct: 298 QESSQSDVGSLHSSKRLFGTREEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 357
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 358 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 413
>RGD|1305371 [details] [associations]
symbol:Sox17 "SRY (sex determining region Y)-box 17"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001570
"vasculogenesis" evidence=IEA;ISO] [GO:0001706 "endoderm formation"
evidence=ISO] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA;ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0003142 "cardiogenic plate morphogenesis" evidence=IEA;ISO]
[GO:0003143 "embryonic heart tube morphogenesis" evidence=ISO]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA;ISO]
[GO:0003308 "negative regulation of Wnt receptor signaling pathway
involved in heart development" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0007369 "gastrulation" evidence=ISO]
[GO:0007492 "endoderm development" evidence=ISO] [GO:0007493
"endodermal cell fate determination" evidence=IEA;ISO] [GO:0008013
"beta-catenin binding" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010628 "positive regulation of gene expression"
evidence=ISO] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA;ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA;ISO] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=IEA;ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=ISO] [GO:0042074 "cell migration involved in gastrulation"
evidence=IEA;ISO] [GO:0042661 "regulation of mesodermal cell fate
specification" evidence=ISO] [GO:0042662 "negative regulation of
mesodermal cell fate specification" evidence=IEA;ISO] [GO:0042789
"mRNA transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA;ISO] [GO:0045595 "regulation of cell differentiation"
evidence=ISO] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA;ISO] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0045995 "regulation
of embryonic development" evidence=ISO] [GO:0048568 "embryonic
organ development" evidence=IEA;ISO] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA;ISO] [GO:0048643 "positive regulation
of skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0048863 "stem cell differentiation" evidence=ISO] [GO:0048866
"stem cell fate specification" evidence=IEA;ISO] [GO:0050821
"protein stabilization" evidence=IEA;ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0060214
"endocardium formation" evidence=IEA;ISO] [GO:0060807 "regulation
of transcription from RNA polymerase II promoter involved in
definitive endodermal cell fate specification" evidence=IEA;ISO]
[GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
[GO:0060956 "endocardial cell differentiation" evidence=IEA;ISO]
[GO:0061009 "common bile duct development" evidence=IEA;ISO]
[GO:0061010 "gall bladder development" evidence=IEA;ISO]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IEA;ISO] [GO:0072001 "renal system development"
evidence=IEA;ISO] [GO:0072091 "regulation of stem cell
proliferation" evidence=IEA;ISO] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:2000035 "regulation of stem cell division" evidence=IEA;ISO]
[GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1305371
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH473984 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 CTD:64321 OMA:ALPCRDG
RefSeq:NP_001101372.1 UniGene:Rn.7884 Ensembl:ENSRNOT00000033116
GeneID:312936 KEGG:rno:312936 NextBio:665393 Uniprot:G3V923
Length = 423
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/89 (37%), Positives = 59/89 (66%)
Query: 58 AGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
AG+++ +++ RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK+
Sbjct: 56 AGTSSRAKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKR 115
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRK 146
+ E A ++ H + HP +K+ + +RK
Sbjct: 116 PFVEEAERLRVQHMQDHPNYKYRPR-RRK 143
>FB|FBgn0042630 [details] [associations]
symbol:Sox21b "Sox21b" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0008301 "DNA
binding, bending" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 EMBL:AE014296 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 OrthoDB:EOG4HHMJQ HSSP:P48432
CTD:406246 EMBL:AY058313 RefSeq:NP_648695.1 UniGene:Dm.955
SMR:Q9VUD3 IntAct:Q9VUD3 MINT:MINT-324417 STRING:Q9VUD3
EnsemblMetazoa:FBtr0075747 EnsemblMetazoa:FBtr0330115 GeneID:39569
KEGG:dme:Dmel_CG32139 UCSC:CG32139-RA FlyBase:FBgn0042630
InParanoid:Q9VUD3 OMA:NEEHIKR GenomeRNAi:39569 NextBio:814314
Uniprot:Q9VUD3
Length = 571
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/93 (35%), Positives = 55/93 (59%)
Query: 60 SATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKY 119
+ T ++++ I+RPMNAFM++S+ R K+ Q +P N +SK LG W L EEK+ +
Sbjct: 238 NTTKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPF 297
Query: 120 HELASEVKEAHFKAHPEWKWCSKDKRKSSTGSG 152
+ A ++ H K HP++K+ + K K+ G
Sbjct: 298 IDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDG 330
>UNIPROTKB|P35713 [details] [associations]
symbol:SOX18 "Transcription factor SOX-18" species:9606
"Homo sapiens" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048866 "stem cell
fate specification" evidence=IEA] [GO:0072091 "regulation of stem
cell proliferation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0061028 "establishment of endothelial barrier" evidence=IMP]
[GO:0001525 "angiogenesis" evidence=IEP] [GO:0043534 "blood vessel
endothelial cell migration" evidence=IEP] [GO:0001946
"lymphangiogenesis" evidence=IMP] [GO:0022405 "hair cycle process"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003151 "outflow tract morphogenesis"
evidence=ISS] [GO:0001947 "heart looping" evidence=ISS] [GO:0001570
"vasculogenesis" evidence=ISS] [GO:0001944 "vasculature
development" evidence=ISS] [GO:0035050 "embryonic heart tube
development" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0060214 "endocardium formation" evidence=ISS] [GO:0060836
"lymphatic endothelial cell differentiation" evidence=ISS]
[GO:0060956 "endocardial cell differentiation" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001701 GO:GO:0001525
GO:GO:0000978 GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000790
GO:GO:0001942 GO:GO:0001946 GO:GO:0060836 GO:GO:0043534
GO:GO:0001570 GO:GO:0001947 GO:GO:0003151 GO:GO:0042789
GO:GO:0048469 GO:GO:0072091 GO:GO:0060956 GO:GO:0060214
GO:GO:0061028 EMBL:AL355803 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
GO:GO:0048866 EMBL:AJ243896 EMBL:AB033888 EMBL:AF270652
EMBL:BC038590 EMBL:BC073971 EMBL:BC111390 EMBL:X65664
IPI:IPI00020428 PIR:S22941 RefSeq:NP_060889.1 UniGene:Hs.8619
ProteinModelPortal:P35713 SMR:P35713 IntAct:P35713 STRING:P35713
PhosphoSite:P35713 DMDM:12644232 PaxDb:P35713 PRIDE:P35713
Ensembl:ENST00000340356 GeneID:54345 KEGG:hsa:54345 UCSC:uc002yhs.3
CTD:54345 GeneCards:GC20M062679 HGNC:HGNC:11194 MIM:601618
MIM:607823 neXtProt:NX_P35713 Orphanet:69735 PharmGKB:PA36031
eggNOG:NOG252325 InParanoid:P35713 OMA:YLNCSRT OrthoDB:EOG4KSPKP
GenomeRNAi:54345 NextBio:56587 Bgee:P35713 CleanEx:HS_SOX18
Genevestigator:P35713 GermOnline:ENSG00000203883 GO:GO:0022405
Uniprot:P35713
Length = 384
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 34/95 (35%), Positives = 56/95 (58%)
Query: 53 LSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLG 112
LS G G + RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W L
Sbjct: 69 LSPAGRGERQAA-DESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELN 127
Query: 113 PEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKS 147
EK+ + E A ++ H + HP +K+ + K+++
Sbjct: 128 AAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQA 162
>UNIPROTKB|Q9W7R5 [details] [associations]
symbol:SOX21 "Transcription factor SOX-21" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HOVERGEN:HBG105618 InterPro:IPR022097 Pfam:PF12336 EMBL:AB026623
IPI:IPI00574367 ProteinModelPortal:Q9W7R5 SMR:Q9W7R5 STRING:Q9W7R5
Uniprot:Q9W7R5
Length = 280
Score = 161 (61.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D ++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A ++
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKSST 149
H K HP++K+ + +RK T
Sbjct: 66 AMHMKEHPDYKY--RPRRKPKT 85
>UNIPROTKB|A4FUB3 [details] [associations]
symbol:SOX5 "SOX5 protein" species:9913 "Bos taurus"
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0061036
"positive regulation of cartilage development" evidence=IEA]
[GO:0060164 "regulation of timing of neuron differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0071560 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0032332
GO:GO:0051216 GO:GO:0048709 GO:GO:0045165 GO:GO:0061036
GO:GO:0060164 GO:GO:0021953 GeneTree:ENSGT00690000101789
HOVERGEN:HBG003915 KO:K09269 HOGENOM:HOG000056455 CTD:6660
eggNOG:NOG253815 OMA:PSEHSSM OrthoDB:EOG42BX84 GO:GO:2000741
EMBL:DAAA02014069 EMBL:DAAA02014070 EMBL:DAAA02014071
EMBL:DAAA02014072 EMBL:DAAA02014073 EMBL:DAAA02014074 EMBL:BC114658
IPI:IPI00704971 RefSeq:NP_001076940.1 UniGene:Bt.32918 SMR:A4FUB3
STRING:A4FUB3 Ensembl:ENSBTAT00000030260 GeneID:533829
KEGG:bta:533829 InParanoid:A4FUB3 NextBio:20876164 Uniprot:A4FUB3
Length = 728
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 37 DGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQD 96
DG + S+ R Y +G GS ++ I+RPMNAFM+++K R K+ Q P+
Sbjct: 497 DGSAGVSESRIYRES----RGRGS-----NEPHIKRPMNAFMVWAKDERRKILQAFPDMH 547
Query: 97 NRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL 156
N +SKILG W ++ EKQ Y+E + + + H + +P++K+ + KR + ++
Sbjct: 548 NSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRI 607
Query: 157 G 157
G
Sbjct: 608 G 608
>UNIPROTKB|F1RSI1 [details] [associations]
symbol:SOX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA] [GO:2000035 "regulation of stem cell division"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA] [GO:0072001 "renal system
development" evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0061010 "gall bladder development"
evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060913 "cardiac cell fate determination"
evidence=IEA] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IEA]
[GO:0042074 "cell migration involved in gastrulation" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007493 "endodermal cell fate determination" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003308 "negative
regulation of Wnt receptor signaling pathway involved in heart
development" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 OMA:ALPCRDG GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
EMBL:CU463866 RefSeq:XP_001928411.1 Ensembl:ENSSSCT00000006855
GeneID:100154087 KEGG:ssc:100154087 Uniprot:F1RSI1
Length = 407
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/89 (38%), Positives = 57/89 (64%)
Query: 58 AGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
AG+A + + RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK+
Sbjct: 56 AGTAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKR 115
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRK 146
+ E A ++ H + HP +K+ + +RK
Sbjct: 116 PFVEEAERLRVQHMQDHPNYKYRPR-RRK 143
>UNIPROTKB|Q90ZH9 [details] [associations]
symbol:sox17a-b "Transcription factor Sox-17-alpha-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007442 "hindgut morphogenesis" evidence=IMP] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007494 "midgut
development" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0007494
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0008013 GO:GO:0042074 GO:GO:0007492 GO:GO:0007442 HSSP:P48431
KO:K04495 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
EMBL:AB052691 EMBL:BC060350 RefSeq:NP_001083136.1 UniGene:Xl.11957
ProteinModelPortal:Q90ZH9 SMR:Q90ZH9 GeneID:398765 KEGG:xla:398765
CTD:398765 Xenbase:XB-GENE-6255435 Uniprot:Q90ZH9
Length = 377
Score = 163 (62.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 55/183 (30%), Positives = 83/183 (45%)
Query: 47 GYC--SRHLSLKGAG---SATGLRSK--DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRT 99
G C S ++ G G S RSK RIRRPMNAFM+++K R ++ Q +P+ N
Sbjct: 28 GQCQWSEPMTSLGEGKLKSDANSRSKAEGRIRRPMNAFMVWAKDERKRLAQQNPDLHNAE 87
Query: 100 VSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLG-- 157
+SK+LG+ W +L EK+ + E A ++ H + HP +K+ + +RK R + G
Sbjct: 88 LSKMLGKSWKALSLAEKRPFVEEAERLRVQHMQDHPNYKYRPR-RRKQVKRMKRAENGFM 146
Query: 158 SMDEGTGEGFMPDD----LEHFENSLEMVTSSNETTVQYLLHPTGRLSNIYSTGFQIPIS 213
M E M D LE+F T + P + Y G+ +P
Sbjct: 147 HMTEAQESAVMGTDGRMCLENFNLGFHEQTYPQLPQASHYREPQAMAPH-YD-GYSLPTP 204
Query: 214 SES 216
S
Sbjct: 205 ESS 207
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 33 LCSKDG-CSKESQRRGYCSRHLSLKGAG 59
+ S DG + Q +G CS + + G G
Sbjct: 1 MSSPDGGYGSDDQNQGKCSVPIMMSGLG 28
>UNIPROTKB|P35711 [details] [associations]
symbol:SOX5 "Transcription factor SOX-5" species:9606 "Homo
sapiens" [GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060164 "regulation of timing of neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032332
"positive regulation of chondrocyte differentiation" evidence=IDA]
[GO:0061036 "positive regulation of cartilage development"
evidence=IDA] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IDA] [GO:2000741 "positive
regulation of mesenchymal stem cell differentiation" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0045892
GO:GO:0071560 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0006366 GO:GO:0032332 GO:GO:0051216
GO:GO:0048709 GO:GO:0045165 GO:GO:0061036 GO:GO:0060164
GO:GO:0021953 HOVERGEN:HBG003915 KO:K09269 EMBL:AB081588
EMBL:AB081589 EMBL:AB081590 EMBL:AB081591 EMBL:AK074317
EMBL:AK098610 EMBL:AK303970 EMBL:AC087244 EMBL:AC087260
EMBL:AC087319 EMBL:AC092864 EMBL:BC029220 EMBL:BC035227
EMBL:BC047665 EMBL:BC060773 EMBL:S83308 EMBL:X65662 IPI:IPI00166143
IPI:IPI00171247 IPI:IPI00216317 IPI:IPI00221270 IPI:IPI01010805
PIR:S22939 RefSeq:NP_001248343.1 RefSeq:NP_001248344.1
RefSeq:NP_008871.3 RefSeq:NP_694534.1 RefSeq:NP_821078.1
UniGene:Hs.657542 ProteinModelPortal:P35711 SMR:P35711
IntAct:P35711 MINT:MINT-1198407 STRING:P35711 PhosphoSite:P35711
DMDM:30179883 PRIDE:P35711 DNASU:6660 Ensembl:ENST00000309359
Ensembl:ENST00000381381 Ensembl:ENST00000396007
Ensembl:ENST00000451604 Ensembl:ENST00000541536
Ensembl:ENST00000545921 Ensembl:ENST00000546136 GeneID:6660
KEGG:hsa:6660 UCSC:uc001rfv.3 UCSC:uc001rfw.3 UCSC:uc001rfy.3
CTD:6660 GeneCards:GC12M023585 HGNC:HGNC:11201 MIM:604975
neXtProt:NX_P35711 PharmGKB:PA36038 eggNOG:NOG253815
InParanoid:P35711 OMA:PSEHSSM OrthoDB:EOG42BX84 PhylomeDB:P35711
ChiTaRS:SOX5 GenomeRNAi:6660 NextBio:25963 ArrayExpress:P35711
Bgee:P35711 Genevestigator:P35711 GermOnline:ENSG00000134532
GO:GO:2000741 Uniprot:P35711
Length = 763
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 37 DGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQD 96
DG + S+ R Y +G GS ++ I+RPMNAFM+++K R K+ Q P+
Sbjct: 532 DGSAGVSESRIYRES----RGRGS-----NEPHIKRPMNAFMVWAKDERRKILQAFPDMH 582
Query: 97 NRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL 156
N +SKILG W ++ EKQ Y+E + + + H + +P++K+ + KR + ++
Sbjct: 583 NSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRI 642
Query: 157 G 157
G
Sbjct: 643 G 643
>MGI|MGI:98367 [details] [associations]
symbol:Sox5 "SRY-box containing gene 5" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IGI;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0021953 "central
nervous system neuron differentiation" evidence=IGI] [GO:0032332
"positive regulation of chondrocyte differentiation"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048709 "oligodendrocyte differentiation" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060164
"regulation of timing of neuron differentiation" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISO] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=ISO] [GO:2000741 "positive
regulation of mesenchymal stem cell differentiation" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98367 Pfam:PF00505 GO:GO:0005634
GO:GO:0045892 GO:GO:0006355 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0032332 GO:GO:0051216 GO:GO:0048709 GO:GO:0045165
GO:GO:0060164 GO:GO:0021953 HOVERGEN:HBG003915 KO:K09269
HOGENOM:HOG000056455 CTD:6660 eggNOG:NOG253815 OrthoDB:EOG42BX84
EMBL:X65657 EMBL:X65658 EMBL:AB006330 EMBL:AJ010604 IPI:IPI00128018
IPI:IPI00466410 IPI:IPI00467353 PIR:S25195 RefSeq:NP_001230092.1
UniGene:Mm.1752 PDB:1I11 PDBsum:1I11 ProteinModelPortal:P35710
SMR:P35710 IntAct:P35710 STRING:P35710 PhosphoSite:P35710
PRIDE:P35710 Ensembl:ENSMUST00000111748 GeneID:20678 KEGG:mmu:20678
InParanoid:P35710 EvolutionaryTrace:P35710 NextBio:299173
Bgee:P35710 CleanEx:MM_SOX5 Genevestigator:P35710
GermOnline:ENSMUSG00000041540 Uniprot:P35710
Length = 763
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 37 DGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQD 96
DG + S+ R Y +G GS ++ I+RPMNAFM+++K R K+ Q P+
Sbjct: 532 DGSAGVSESRIYRES----RGRGS-----NEPHIKRPMNAFMVWAKDERRKILQAFPDMH 582
Query: 97 NRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL 156
N +SKILG W ++ EKQ Y+E + + + H + +P++K+ + KR + ++
Sbjct: 583 NSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRI 642
Query: 157 G 157
G
Sbjct: 643 G 643
>UNIPROTKB|Q9H6I2 [details] [associations]
symbol:SOX17 "Transcription factor SOX-17" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001828 "inner
cell mass cellular morphogenesis" evidence=IEA] [GO:0003308
"negative regulation of Wnt receptor signaling pathway involved in
heart development" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007493 "endodermal cell fate determination"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0042074 "cell
migration involved in gastrulation" evidence=IEA] [GO:0042662
"negative regulation of mesodermal cell fate specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0048568 "embryonic
organ development" evidence=IEA] [GO:0048643 "positive regulation
of skeletal muscle tissue development" evidence=IEA] [GO:0048866
"stem cell fate specification" evidence=IEA] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA] [GO:0061009 "common
bile duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0072091 "regulation of stem cell
proliferation" evidence=IEA] [GO:2000035 "regulation of stem cell
division" evidence=IEA] [GO:2000043 "regulation of cardiac cell
fate specification" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0001706 "endoderm formation" evidence=IDA]
[GO:0001947 "heart looping" evidence=ISS] [GO:0045995 "regulation
of embryonic development" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0060956 "endocardial cell differentiation" evidence=ISS]
[GO:0060214 "endocardium formation" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0035050 "embryonic heart tube development" evidence=ISS]
[GO:0001570 "vasculogenesis" evidence=ISS] [GO:0001525
"angiogenesis" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0060914 "heart formation" evidence=TAS]
[GO:0060913 "cardiac cell fate determination" evidence=IMP]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=ISS] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=ISS] [GO:0048617 "embryonic foregut
morphogenesis" evidence=ISS] [GO:0003143 "embryonic heart tube
morphogenesis" evidence=ISS] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=ISS] [GO:0072001 "renal system development"
evidence=IMP] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] InterPro:IPR009071
Pfam:PF00505 GO:GO:0050821 GO:GO:0030308 GO:GO:0043565
GO:GO:0045597 GO:GO:0045944 GO:GO:0007283 GO:GO:0001525
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0003713 GO:GO:0001570 GO:GO:0090090 GO:GO:0001947
GO:GO:0045732 GO:GO:0042074 GO:GO:0003151 GO:GO:0060070
GO:GO:0060914 GO:GO:0042789 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0045995 GO:GO:0048643 GO:GO:2000035 GO:GO:0042662
GO:GO:0072001 GO:GO:0007493 GO:GO:0072091 GO:GO:0061031
GO:GO:0061009 GO:GO:0061010 GO:GO:0060913 GO:GO:0060956
GO:GO:0060214 eggNOG:NOG242943 Orphanet:289365 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 EMBL:AB073988
EMBL:AK025905 IPI:IPI00007874 RefSeq:NP_071899.1 UniGene:Hs.98367
PDB:2YUL PDB:4A3N PDBsum:2YUL PDBsum:4A3N ProteinModelPortal:Q9H6I2
SMR:Q9H6I2 STRING:Q9H6I2 PhosphoSite:Q9H6I2 DMDM:23822216
PRIDE:Q9H6I2 DNASU:64321 Ensembl:ENST00000297316 GeneID:64321
KEGG:hsa:64321 UCSC:uc003xsb.4 CTD:64321 GeneCards:GC08P055370
H-InvDB:HIX0034521 HGNC:HGNC:18122 HPA:CAB025594 MIM:610928
MIM:613674 neXtProt:NX_Q9H6I2 PharmGKB:PA38296 HOGENOM:HOG000069999
HOVERGEN:HBG000517 InParanoid:Q9H6I2 OMA:ALPCRDG OrthoDB:EOG4KD6M5
PhylomeDB:Q9H6I2 EvolutionaryTrace:Q9H6I2 GenomeRNAi:64321
NextBio:66237 ArrayExpress:Q9H6I2 Bgee:Q9H6I2 CleanEx:HS_SOX17
Genevestigator:Q9H6I2 GermOnline:ENSG00000164736 GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
Uniprot:Q9H6I2
Length = 414
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 34/89 (38%), Positives = 57/89 (64%)
Query: 58 AGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
AG+A + + RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK+
Sbjct: 56 AGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKR 115
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRK 146
+ E A ++ H + HP +K+ + +RK
Sbjct: 116 PFVEEAERLRVQHMQDHPNYKYRPR-RRK 143
>MGI|MGI:98365 [details] [associations]
symbol:Sox3 "SRY-box containing gene 3" species:10090 "Mus
musculus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007423 "sensory organ development"
evidence=IMP] [GO:0007530 "sex determination" evidence=ISO;IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0021854
"hypothalamus development" evidence=IMP] [GO:0021983 "pituitary
gland development" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IMP] [GO:0048515 "spermatid differentiation"
evidence=IMP] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR009071 MGI:MGI:98365 Pfam:PF00505 GO:GO:0005634
GO:GO:0007423 GO:GO:0045665 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 eggNOG:NOG321816 GO:GO:0007530
HOGENOM:HOG000231647 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:X94125 EMBL:AF434675 EMBL:AB108674
IPI:IPI00986516 PIR:S10948 UniGene:Mm.35784
ProteinModelPortal:P53784 SMR:P53784 STRING:P53784
PhosphoSite:P53784 PRIDE:P53784 InParanoid:Q80XF1 ChiTaRS:SOX3
Bgee:P53784 CleanEx:MM_SOX3 Genevestigator:P53784
GermOnline:ENSMUSG00000045179 Uniprot:P53784
Length = 375
Score = 164 (62.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G G G +DR++RPMNAFM++S+ R K+ +P N +SK LG W L EK
Sbjct: 56 GGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEK 115
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 116 RPFIDEAKRLRAVHMKEYPDYKY--RPRRKTKT 146
>UNIPROTKB|B3DLD3 [details] [associations]
symbol:sox18 "Transcription factor Sox-18" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007507 "heart development" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0006355 GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030178
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270 CTD:54345
EMBL:BC167402 RefSeq:NP_001123409.1 UniGene:Str.78926
GeneID:100170185 KEGG:xtr:100170185 Xenbase:XB-GENE-483233
Uniprot:B3DLD3
Length = 362
Score = 162 (62.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 30/79 (37%), Positives = 52/79 (65%)
Query: 69 RIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKE 128
RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK+ + E A ++
Sbjct: 67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLSSAEKRPFVEEAERLRV 126
Query: 129 AHFKAHPEWKWCSKDKRKS 147
H + HP +K+ + K+++
Sbjct: 127 QHLQDHPNYKYRPRRKKQA 145
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 194 LHPTGRLSNIYSTGFQIPISSESLGNVKQPTTP 226
LHP G ++ S G P S +V +P+ P
Sbjct: 176 LHPLGGSGDLESYGLPTPEMSPL--DVVEPSEP 206
>FB|FBgn0000411 [details] [associations]
symbol:D "Dichaete" species:7227 "Drosophila melanogaster"
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=NAS;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0035120 "post-embryonic appendage
morphogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0007442 "hindgut morphogenesis"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0060810 "intracellular mRNA
localization involved in pattern specification process"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0007420 EMBL:AE014296 GO:GO:0043565
GO:GO:0045944 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0003730 GO:GO:0009950 GO:GO:0002168 GO:GO:0007350
GeneTree:ENSGT00690000101940 EMBL:U68056 EMBL:X96419 EMBL:AY118670
EMBL:BT030105 RefSeq:NP_524066.1 UniGene:Dm.1835
ProteinModelPortal:Q24533 SMR:Q24533 DIP:DIP-21577N
MINT:MINT-800284 STRING:Q24533 PRIDE:Q24533
EnsemblMetazoa:FBtr0075746 EnsemblMetazoa:FBtr0333034
EnsemblMetazoa:FBtr0333035 EnsemblMetazoa:FBtr0333036 GeneID:39570
KEGG:dme:Dmel_CG5893 FlyBase:FBgn0000411 eggNOG:NOG319555
InParanoid:Q24533 OMA:QEGHIKR OrthoDB:EOG4HHMJQ PhylomeDB:Q24533
GenomeRNAi:39570 NextBio:814319 Bgee:Q24533 GermOnline:CG5893
GO:GO:0007442 GO:GO:0060810 GO:GO:0035120 Uniprot:Q24533
Length = 382
Score = 164 (62.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 50 SRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWY 109
S H S AT + I+RPMNAFM++S+ R ++ + +P N +SK LG W
Sbjct: 122 SGHQSAGMHSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWK 181
Query: 110 SLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSG-RGKLGSMDEGTGE 165
L EK+ + + A ++ H K HP++K+ + K K+ +G +G L G G+
Sbjct: 182 LLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQ 238
>MGI|MGI:98371 [details] [associations]
symbol:Sox9 "SRY-box containing gene 9" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO;IDA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IDA] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001502 "cartilage
condensation" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001894 "tissue homeostasis" evidence=IMP]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IMP;IDA] [GO:0001942 "hair follicle development"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002063 "chondrocyte development"
evidence=IMP] [GO:0002683 "negative regulation of immune system
process" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
[GO:0003188 "heart valve formation" evidence=IMP] [GO:0003203
"endocardial cushion morphogenesis" evidence=IMP] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISO] [GO:0003415 "chondrocyte hypertrophy"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO;IMP;IDA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISO;IDA]
[GO:0004672 "protein kinase activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=ISO] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IGI]
[GO:0007507 "heart development" evidence=IMP] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0008584 "male gonad development" evidence=ISO;IGI;IMP]
[GO:0010564 "regulation of cell cycle process" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=IGI]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019100
"male germ-line sex determination" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IMP] [GO:0030198 "extracellular matrix
organization" evidence=IMP] [GO:0030238 "male sex determination"
evidence=IGI] [GO:0030279 "negative regulation of ossification"
evidence=IMP] [GO:0030502 "negative regulation of bone
mineralization" evidence=IMP] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISO;IDA;IMP]
[GO:0034236 "protein kinase A catalytic subunit binding"
evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035326 "enhancer binding" evidence=ISO;IDA]
[GO:0035622 "intrahepatic bile duct development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043491 "protein kinase B signaling cascade" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045595 "regulation of cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0060008 "Sertoli cell differentiation"
evidence=IMP] [GO:0060009 "Sertoli cell development" evidence=IGI]
[GO:0060018 "astrocyte fate commitment" evidence=IGI] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0060221
"retinal rod cell differentiation" evidence=IGI] [GO:0060350
"endochondral bone morphogenesis" evidence=IMP] [GO:0060512
"prostate gland morphogenesis" evidence=IMP] [GO:0060517
"epithelial cell proliferation involved in prostatic bud
elongation" evidence=IMP] [GO:0060729 "intestinal epithelial
structure maintenance" evidence=IMP] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISO;IDA] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=IGI] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=IMP] [GO:0070371 "ERK1 and
ERK2 cascade" evidence=IDA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=IDA] [GO:0071364 "cellular response to
epidermal growth factor stimulus" evidence=IDA] [GO:0071504
"cellular response to heparin" evidence=IDA] [GO:0071560 "cellular
response to transforming growth factor beta stimulus" evidence=ISO]
[GO:0072034 "renal vesicle induction" evidence=IMP] [GO:0072197
"ureter morphogenesis" evidence=IGI] [GO:0072289 "metanephric
nephron tubule formation" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IDA] [GO:0090103 "cochlea morphogenesis" evidence=IMP]
[GO:0090184 "positive regulation of kidney development"
evidence=IGI] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:2000020
"positive regulation of male gonad development" evidence=ISO]
[GO:2000138 "positive regulation of cell proliferation involved in
heart morphogenesis" evidence=IMP] [GO:2000741 "positive regulation
of mesenchymal stem cell differentiation" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98371 Pfam:PF00505 GO:GO:0001708
GO:GO:0007173 GO:GO:0045892 GO:GO:0043066 GO:GO:0006461
GO:GO:0030155 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0071300 GO:GO:0030198 GO:GO:0014068 GO:GO:0007283
GO:GO:0003682 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0060174 GO:GO:0030903
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0060018
GO:GO:0035622 GO:GO:0072190 GO:GO:0072289 GO:GO:0072197
GO:GO:0003188 eggNOG:NOG295709 GeneTree:ENSGT00670000097649
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 CTD:6662 OMA:GAGHVWM EMBL:AF421878 EMBL:AK030187
EMBL:AK049986 EMBL:BC004064 EMBL:BC023796 EMBL:BC023808
EMBL:BC023953 EMBL:BC024958 EMBL:BC034264 EMBL:Z18958
IPI:IPI00131219 PIR:S30243 PIR:S52469 RefSeq:NP_035578.3
UniGene:Mm.286407 ProteinModelPortal:Q04887 SMR:Q04887
IntAct:Q04887 STRING:Q04887 PhosphoSite:Q04887 PRIDE:Q04887
Ensembl:ENSMUST00000000579 GeneID:20682 KEGG:mmu:20682
InParanoid:Q04887 NextBio:299193 Bgee:Q04887 CleanEx:MM_SOX9
Genevestigator:Q04887 GermOnline:ENSMUSG00000000567 Uniprot:Q04887
Length = 507
Score = 159 (61.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
Score = 48 (22.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P +L H+ S +T S ++ + Y H G+ S +YST
Sbjct: 418 YSPFNLPHYSPSYPPITRSQYDYADHQNSGSYYSHAAGQGSGLYST 463
>UNIPROTKB|D4A3R7 [details] [associations]
symbol:683733 "Protein 683733" species:10116 "Rattus
norvegicus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
IPI:IPI00565348 Ensembl:ENSRNOT00000042687 ArrayExpress:D4A3R7
Uniprot:D4A3R7
Length = 435
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 33/97 (34%), Positives = 58/97 (59%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + G+ + K I++P+NAFM++ K RAKV +++ +
Sbjct: 322 QESSQSDVGSLHSSKRLFGTREEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 381
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEW 137
++ILG W++L EE+ KY+ELA + ++ H + +P W
Sbjct: 382 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 418
>RGD|3759 [details] [associations]
symbol:Sry "sex determining region Y" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007530 "sex determination" evidence=ISO]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008301 "DNA
binding, bending" evidence=ISO] [GO:0008584 "male gonad development"
evidence=ISO] [GO:0010629 "negative regulation of gene expression"
evidence=ISO] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=ISO;IEP]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IDA] [GO:2000020 "positive regulation of male
gonad development" evidence=ISO] InterPro:IPR009071 Pfam:PF00505
RGD:3759 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0016607
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GO:GO:0030238 HOVERGEN:HBG008712 InterPro:IPR027151
PANTHER:PTHR10270:SF84 EMBL:X89730 EMBL:AJ222688 EMBL:Z26907
IPI:IPI00551785 PIR:S58088 ProteinModelPortal:P36394 SMR:P36394
PRIDE:P36394 Genevestigator:P36394 Uniprot:P36394
Length = 121
Score = 144 (55.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 69 RIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKE 128
+++RPMNAFM++S+ R K+ Q +P+ N +SK LG W SL EK+ + + A +K
Sbjct: 4 QVKRPMNAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKT 63
Query: 129 AHFKAHPEWKW 139
H + +P +K+
Sbjct: 64 LHREKYPNYKY 74
>UNIPROTKB|Q9Y651 [details] [associations]
symbol:SOX21 "Transcription factor SOX-21" species:9606
"Homo sapiens" [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=NAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=NAS]
InterPro:IPR009071 EMBL:AF107044 Pfam:PF00505 GO:GO:0005634
GO:GO:0043588 GO:GO:0003677 GO:GO:0048863 GO:GO:0045665
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH471085 GO:GO:0001942 GO:GO:0000981 eggNOG:NOG302715
HOGENOM:HOG000231647 HOVERGEN:HBG105618 KO:K09267
InterPro:IPR022097 Pfam:PF12336 EMBL:AL137061 EMBL:X71136
EMBL:X65666 IPI:IPI00001824 PIR:I38238 PIR:S22937
RefSeq:NP_009015.1 UniGene:Hs.187577 ProteinModelPortal:Q9Y651
SMR:Q9Y651 STRING:Q9Y651 PhosphoSite:Q9Y651 DMDM:6831690
PRIDE:Q9Y651 DNASU:11166 Ensembl:ENST00000376945 GeneID:11166
KEGG:hsa:11166 UCSC:uc001vma.3 CTD:11166 GeneCards:GC13M095361
H-InvDB:HIX0037360 HGNC:HGNC:11197 MIM:604974 neXtProt:NX_Q9Y651
PharmGKB:PA36034 InParanoid:Q9Y651 OMA:KPKTLMK OrthoDB:EOG4S1T8V
PhylomeDB:Q9Y651 GenomeRNAi:11166 NextBio:42483 Bgee:Q9Y651
CleanEx:HS_SOX21 Genevestigator:Q9Y651 GermOnline:ENSG00000125285
Uniprot:Q9Y651
Length = 276
Score = 160 (61.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D ++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A ++
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKSST 149
H K HP++K+ + +RK T
Sbjct: 66 AMHMKEHPDYKY--RPRRKPKT 85
>MGI|MGI:2654070 [details] [associations]
symbol:Sox21 "SRY-box containing gene 21" species:10090 "Mus
musculus" [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0042633 "hair cycle" evidence=IMP] [GO:0043588 "skin
development" evidence=IMP] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR009071 PROSITE:PS00353
MGI:MGI:2654070 Pfam:PF00505 GO:GO:0005634 GO:GO:0043588
GO:GO:0003677 GO:GO:0048863 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
CleanEx:MM_SOX21 eggNOG:NOG302715 HOGENOM:HOG000231647
HOVERGEN:HBG105618 KO:K09267 InterPro:IPR022097 Pfam:PF12336
CTD:11166 OMA:KPKTLMK EMBL:AY142959 EMBL:AY069926 EMBL:BC069176
EMBL:BC147556 EMBL:BC147565 IPI:IPI00453678 RefSeq:NP_808421.1
UniGene:Mm.70950 ProteinModelPortal:Q811W0 SMR:Q811W0 STRING:Q811W0
PhosphoSite:Q811W0 PRIDE:Q811W0 Ensembl:ENSMUST00000082178
Ensembl:ENSMUST00000170662 GeneID:223227 KEGG:mmu:223227
UCSC:uc007uyt.2 NextBio:376665 Bgee:Q811W0 Genevestigator:Q811W0
GermOnline:ENSMUSG00000061517 Uniprot:Q811W0
Length = 276
Score = 160 (61.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D ++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A ++
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKSST 149
H K HP++K+ + +RK T
Sbjct: 66 AMHMKEHPDYKY--RPRRKPKT 85
>UNIPROTKB|F1RV30 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9823 "Sus
scrofa" [GO:0035622 "intrahepatic bile duct development"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0034236 "protein kinase A catalytic subunit
binding" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030916 "otic vesicle formation" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0019100 "male germ-line
sex determination" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0014032
"neural crest cell development" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010564
"regulation of cell cycle process" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003415 "chondrocyte hypertrophy"
evidence=IEA] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IEA] [GO:2000741
"positive regulation of mesenchymal stem cell differentiation"
evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0072197 "ureter morphogenesis" evidence=IEA]
[GO:0072190 "ureter urothelium development" evidence=IEA]
[GO:0072034 "renal vesicle induction" evidence=IEA] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0070371 "ERK1 and ERK2
cascade" evidence=IEA] [GO:0061036 "positive regulation of
cartilage development" evidence=IEA] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=IEA] [GO:0060221 "retinal rod
cell differentiation" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060009 "Sertoli cell development" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0060174 GO:GO:0030903
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0060018
GO:GO:0035622 GO:GO:0072190 GO:GO:0072289 GO:GO:0072197
GO:GO:0003188 GeneTree:ENSGT00670000097649 InterPro:IPR022151
Pfam:PF12444 GO:GO:2000741 GO:GO:0072034 GO:GO:0060221
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 OMA:GAGHVWM EMBL:CU640384 Ensembl:ENSSSCT00000018780
ArrayExpress:F1RV30 Uniprot:F1RV30
Length = 511
Score = 159 (61.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
Score = 48 (22.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P +L H+ S +T S ++ + Y H G+ S +YST
Sbjct: 422 YSPFNLPHYSPSYPPITRSQYDYTDHQNSGSYYSHAAGQGSGLYST 467
>UNIPROTKB|Q7YRJ7 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9615
"Canis lupus familiaris" [GO:0006468 "protein phosphorylation"
evidence=ISS] [GO:0010564 "regulation of cell cycle process"
evidence=ISS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=ISS] [GO:0003170 "heart valve
development" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0060784 "regulation of cell proliferation involved in tissue
homeostasis" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISS] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:2000741 "positive regulation of
mesenchymal stem cell differentiation" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0006334 "nucleosome
assembly" evidence=ISS] [GO:0071504 "cellular response to heparin"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071260 "cellular response to
mechanical stimulus" evidence=ISS] [GO:0070371 "ERK1 and ERK2
cascade" evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=ISS] [GO:0070168 "negative
regulation of biomineral tissue development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=ISS] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0090103
"cochlea morphogenesis" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0003415
"chondrocyte hypertrophy" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=ISS] [GO:0046533 "negative regulation of photoreceptor
cell differentiation" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0042981
"regulation of apoptotic process" evidence=ISS] [GO:0042127
"regulation of cell proliferation" evidence=ISS] [GO:0035019
"somatic stem cell maintenance" evidence=ISS] [GO:0030916 "otic
vesicle formation" evidence=ISS] [GO:0030858 "positive regulation
of epithelial cell differentiation" evidence=ISS] [GO:0019100 "male
germ-line sex determination" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003179
"heart valve morphogenesis" evidence=ISS] [GO:0001708 "cell fate
specification" evidence=ISS] [GO:0001837 "epithelial to mesenchymal
transition" evidence=ISS] [GO:0001942 "hair follicle development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0032332
"positive regulation of chondrocyte differentiation" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0006461
"protein complex assembly" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0090184 "positive regulation of kidney
development" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708
GO:GO:0007173 GO:GO:0045892 GO:GO:0043066 GO:GO:0006461
GO:GO:0019933 GO:GO:0070371 GO:GO:0014068 GO:GO:0007283
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0001942 GO:GO:0032332
GO:GO:0030279 GO:GO:0090090 GO:GO:0071260 GO:GO:0035019
GO:GO:0001934 GO:GO:0090190 GO:GO:0071364 GO:GO:0043491
GO:GO:0001502 GO:GO:0001837 GO:GO:0050680 GO:GO:0001158
GO:GO:0030858 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0060008
GO:GO:0030916 GO:GO:2000020 GO:GO:0046533 GO:GO:0090103
GO:GO:0010564 GO:GO:0019100 GO:GO:0003179 GO:GO:0070168
GO:GO:0072289 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 EMBL:AY237827 RefSeq:NP_001002978.1 UniGene:Cfa.175
ProteinModelPortal:Q7YRJ7 SMR:Q7YRJ7 STRING:Q7YRJ7 GeneID:403464
KEGG:cfa:403464 CTD:6662 NextBio:20816981 Uniprot:Q7YRJ7
Length = 513
Score = 159 (61.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
Score = 48 (22.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P L H+ S +T S ++ + Y H G+ S++YST
Sbjct: 424 YSPFSLPHYSPSYPPITRSQYDYTDHQNSGSYYSHAAGQGSSLYST 469
>FB|FBgn0036411 [details] [associations]
symbol:Sox21a "Sox21a" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0006911 EMBL:AE014296
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 OrthoDB:EOG4HHMJQ HSSP:P48432
eggNOG:NOG302715 KO:K09267 CTD:30543 EMBL:BT022137
RefSeq:NP_648694.1 UniGene:Dm.24001 SMR:Q9VUD1
EnsemblMetazoa:FBtr0075748 GeneID:39567 KEGG:dme:Dmel_CG7345
UCSC:CG7345-RA FlyBase:FBgn0036411 InParanoid:Q9VUD1 OMA:PWRYLPL
GenomeRNAi:39567 NextBio:814309 Uniprot:Q9VUD1
Length = 388
Score = 162 (62.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 40/117 (34%), Positives = 60/117 (51%)
Query: 58 AGSATGLR--SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
+ S TG S D I+RPMNAFM++S+ R K+ Q +P N +SK LG W L +
Sbjct: 107 SNSNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQ 166
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKRKSST------GSGRGKLGSMDEGTGEG 166
K+ + + A ++ H K HP++K+ + K K+ G G G G + G G
Sbjct: 167 KRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGANGGVNAG 223
Score = 40 (19.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 322 GGQENKG-TGPQTSHFKKDKDLETEPMAKS 350
GG N G +GP + KD + P+ +S
Sbjct: 223 GGAGNSGPSGPGSVGSPKDMQPQLSPLGQS 252
>UNIPROTKB|A6QPP5 [details] [associations]
symbol:TCF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HOGENOM:HOG000116032 HOVERGEN:HBG000419 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
EMBL:DAAA02020329 EMBL:DAAA02020330 EMBL:DAAA02020331
EMBL:DAAA02020332 EMBL:DAAA02020333 UniGene:Bt.44634 EMBL:BC149418
IPI:IPI00838387 SMR:A6QPP5 STRING:A6QPP5 Ensembl:ENSBTAT00000001328
Uniprot:A6QPP5
Length = 253
Score = 158 (60.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/121 (31%), Positives = 66/121 (54%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 119 RSLKAQADSKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 178
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEW---------KWCSKDK-RKSSTGSGRGKLGSMD 160
L EE+ KY+ELA + ++ H + +P W K S++K ++S++G R G+
Sbjct: 179 LSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESNSGGKRNAFGTYP 238
Query: 161 E 161
E
Sbjct: 239 E 239
>UNIPROTKB|Q90ZH7 [details] [associations]
symbol:sox18-b "Transcription factor Sox-18B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007507
"heart development" evidence=IMP] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007507 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030178 HSSP:P48431
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270
EMBL:AB052693 EMBL:BC072123 RefSeq:NP_001082104.1 UniGene:Xl.11959
ProteinModelPortal:Q90ZH7 SMR:Q90ZH7 GeneID:398227 KEGG:xla:398227
CTD:398227 Xenbase:XB-GENE-6251810 Uniprot:Q90ZH7
Length = 361
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/134 (32%), Positives = 71/134 (52%)
Query: 69 RIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKE 128
RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK+ + E A ++
Sbjct: 65 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSAEKRPFVEEAERLRV 124
Query: 129 AHFKAHPEWKWCSKDKRKSSTGSGRGKLGSM-DEGTGEGFMPDDLEHFENSLEMVTSSNE 187
H + HP +K+ + K+++ + +EG G +L HF L + S E
Sbjct: 125 QHLQDHPNYKYRPRRKKQAKKLKRMDPSHHLRNEGYTGGQPMVNLSHFRE-LHPLGGSGE 183
Query: 188 TTVQYLLHPTGRLS 201
Y L PT +S
Sbjct: 184 LE-SYGL-PTPEMS 195
>UNIPROTKB|F1PSM5 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9615
"Canis lupus familiaris" [GO:2000741 "positive regulation of
mesenchymal stem cell differentiation" evidence=IEA] [GO:2000138
"positive regulation of cell proliferation involved in heart
morphogenesis" evidence=IEA] [GO:2000020 "positive regulation of
male gonad development" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0090103 "cochlea morphogenesis" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0072289 "metanephric nephron
tubule formation" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072190 "ureter urothelium development"
evidence=IEA] [GO:0072034 "renal vesicle induction" evidence=IEA]
[GO:0071560 "cellular response to transforming growth factor beta
stimulus" evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0070371 "ERK1 and ERK2
cascade" evidence=IEA] [GO:0061036 "positive regulation of
cartilage development" evidence=IEA] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=IEA] [GO:0060221 "retinal rod
cell differentiation" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060009 "Sertoli cell development" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0035622 "intrahepatic bile
duct development" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0034236 "protein kinase A catalytic
subunit binding" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030916 "otic vesicle formation" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0019100 "male germ-line
sex determination" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0014032
"neural crest cell development" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010564
"regulation of cell cycle process" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003415 "chondrocyte hypertrophy"
evidence=IEA] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708 GO:GO:0007173
GO:GO:0045892 GO:GO:0043066 GO:GO:0006461 GO:GO:0030155
GO:GO:0071560 GO:GO:0019933 GO:GO:0070371 GO:GO:0071300
GO:GO:0030198 GO:GO:0014068 GO:GO:0007283 GO:GO:0003682
GO:GO:0003705 GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672
GO:GO:0071504 GO:GO:0001942 GO:GO:0032332 GO:GO:0060009
GO:GO:0090090 GO:GO:0071260 GO:GO:0035019 GO:GO:0001934
GO:GO:0090190 GO:GO:0071364 GO:GO:0031018 GO:GO:0043491
GO:GO:0014032 GO:GO:0001502 GO:GO:0045732 GO:GO:0001837
GO:GO:0050680 GO:GO:0001503 GO:GO:0001658 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0048709 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0030879
GO:GO:0050679 GO:GO:0002053 GO:GO:0001046 GO:GO:0030502
GO:GO:2000138 GO:GO:0061036 GO:GO:0003203 GO:GO:0032331
GO:GO:0045662 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0060174 GO:GO:0030903 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0060018 GO:GO:0035622 GO:GO:0072190
GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 GO:GO:0003415
GO:GO:0060517 GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 OMA:GAGHVWM
EMBL:AAEX03006327 Ensembl:ENSCAFT00000007033 Uniprot:F1PSM5
Length = 505
Score = 158 (60.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 36/131 (27%), Positives = 72/131 (54%)
Query: 33 LCSKDGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIH 92
+C ++G S+ + + + ++ GS+ ++K ++RPMNAFM+++ K+ +
Sbjct: 71 VCIREGVSQVLKGYDWTLVPMPVRVNGSS---KNKPHVKRPMNAFMVWAHAAPRKLPDQY 127
Query: 93 PNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSG 152
P+ N +SK+LG+ W L EK+ + E A ++ H K HP++K+ + +R+ S +G
Sbjct: 128 PHLHNAELSKLLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKY--QPRRRKSVKNG 185
Query: 153 RGKLGSMDEGT 163
+ + E T
Sbjct: 186 QAEAEEATEQT 196
Score = 48 (22.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P L H+ S +T S ++ + Y H G+ S++YST
Sbjct: 416 YSPFSLPHYSPSYPPITRSQYDYTDHQNSGSYYSHAAGQGSSLYST 461
>UNIPROTKB|B0ZTE1 [details] [associations]
symbol:sox21 "Transcription factor Sox-21" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0007399 "nervous
system development" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:11166 EMBL:EU403424 RefSeq:NP_001165684.1
UniGene:Xl.85657 ProteinModelPortal:B0ZTE1 SMR:B0ZTE1
GeneID:100337612 KEGG:xla:100337612 Xenbase:XB-GENE-6464309
Uniprot:B0ZTE1
Length = 262
Score = 158 (60.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D ++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A ++
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKSST 149
H K HP++K+ + +RK T
Sbjct: 66 AMHMKDHPDYKY--RPRRKPKT 85
>UNIPROTKB|I3LG51 [details] [associations]
symbol:LOC100623770 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0060324 "face development" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048515
"spermatid differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0007530 "sex determination" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0007423 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 GeneTree:ENSGT00690000101940
GO:GO:0007530 KO:K09267 InterPro:IPR022097 Pfam:PF12336 OMA:PDPPAHR
EMBL:CU856631 RefSeq:XP_003360512.1 Ensembl:ENSSSCT00000024126
GeneID:100623770 KEGG:ssc:100623770 Uniprot:I3LG51
Length = 448
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G G G +DR++RPMNAFM++S+ R K+ +P N +SK LG W L EK
Sbjct: 129 GGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEK 188
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 189 RPFIDEAKRLRAVHMKEYPDYKY--RPRRKTKT 219
>UNIPROTKB|E2GH20 [details] [associations]
symbol:TCF7L2 "T-cell factor-4 variant X2" species:9606
"Homo sapiens" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 PANTHER:PTHR10373 EMBL:AL135792 EMBL:AL158212
EMBL:AL445486 EMBL:AL451084 UniGene:Hs.593995 HGNC:HGNC:11641
ChiTaRS:TCF7L2 EMBL:HM352845 IPI:IPI01014645 SMR:E2GH20
Ensembl:ENST00000542695 UCSC:uc021pyg.1 Uniprot:E2GH20
Length = 335
Score = 161 (61.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 37 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 96
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 97 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 152
>MGI|MGI:107543 [details] [associations]
symbol:Sox17 "SRY-box containing gene 17" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0001525
"angiogenesis" evidence=IGI] [GO:0001570 "vasculogenesis"
evidence=IGI] [GO:0001706 "endoderm formation" evidence=ISO]
[GO:0001828 "inner cell mass cellular morphogenesis" evidence=IMP]
[GO:0001947 "heart looping" evidence=IMP] [GO:0003142 "cardiogenic
plate morphogenesis" evidence=IMP] [GO:0003143 "embryonic heart
tube morphogenesis" evidence=IMP] [GO:0003151 "outflow tract
morphogenesis" evidence=IGI] [GO:0003308 "negative regulation of
Wnt receptor signaling pathway involved in heart development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IDA] [GO:0007369 "gastrulation"
evidence=IMP] [GO:0007492 "endoderm development" evidence=IMP]
[GO:0007493 "endodermal cell fate determination" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IMP] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IDA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IDA;IMP] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0035050 "embryonic heart tube
development" evidence=IGI] [GO:0042074 "cell migration involved in
gastrulation" evidence=IMP] [GO:0042661 "regulation of mesodermal
cell fate specification" evidence=IMP] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IMP]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] [GO:0045597 "positive regulation of
cell differentiation" evidence=IMP;IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0045995 "regulation
of embryonic development" evidence=IMP] [GO:0048568 "embryonic
organ development" evidence=IMP] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IMP] [GO:0048643 "positive regulation of
skeletal muscle tissue development" evidence=IDA] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0048866 "stem cell fate
specification" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=ISO] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IDA] [GO:0060214 "endocardium formation"
evidence=IGI] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IMP] [GO:0060913 "cardiac cell fate
determination" evidence=ISO] [GO:0060956 "endocardial cell
differentiation" evidence=IGI] [GO:0061009 "common bile duct
development" evidence=IMP] [GO:0061010 "gall bladder development"
evidence=IMP] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IMP] [GO:0072001 "renal system development"
evidence=ISO] [GO:0072091 "regulation of stem cell proliferation"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:2000035 "regulation
of stem cell division" evidence=IMP] [GO:2000043 "regulation of
cardiac cell fate specification" evidence=IMP] InterPro:IPR009071
MGI:MGI:107543 Pfam:PF00505 GO:GO:0005634 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214
eggNOG:NOG242943 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 CTD:64321
HOGENOM:HOG000069999 HOVERGEN:HBG000517 OMA:ALPCRDG
OrthoDB:EOG4KD6M5 GO:GO:0003142 GO:GO:0001828 GO:GO:2000043
GO:GO:0060807 GO:GO:0048866 EMBL:D49474 EMBL:D49473 EMBL:AK004781
EMBL:L29085 IPI:IPI00121298 IPI:IPI00230012 RefSeq:NP_035571.1
UniGene:Mm.279103 PDB:3F27 PDBsum:3F27 ProteinModelPortal:Q61473
SMR:Q61473 STRING:Q61473 PhosphoSite:Q61473 PRIDE:Q61473
DNASU:20671 Ensembl:ENSMUST00000027035 Ensembl:ENSMUST00000116652
GeneID:20671 KEGG:mmu:20671 UCSC:uc007aey.1 UCSC:uc007afb.1
InParanoid:Q61473 NextBio:299151 Bgee:Q61473 CleanEx:MM_SOX17
Genevestigator:Q61473 GermOnline:ENSMUSG00000025902 Uniprot:Q61473
Length = 419
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 33/89 (37%), Positives = 58/89 (65%)
Query: 58 AGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
AG++ +++ RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W +L EK+
Sbjct: 56 AGTSGRAKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKR 115
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRK 146
+ E A ++ H + HP +K+ + +RK
Sbjct: 116 PFVEEAERLRVQHMQDHPNYKYRPR-RRK 143
>UNIPROTKB|F1NEB2 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 PANTHER:PTHR10373 GeneTree:ENSGT00390000009964
EMBL:AADN02030905 EMBL:AADN02030906 EMBL:AADN02030907
EMBL:AADN02030908 EMBL:AADN02030909 IPI:IPI00581399
Ensembl:ENSGALT00000033105 ArrayExpress:F1NEB2 Uniprot:F1NEB2
Length = 339
Score = 161 (61.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 75 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 134
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 135 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 190
>UNIPROTKB|P48436 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9606 "Homo
sapiens" [GO:0001503 "ossification" evidence=IEA] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0003188 "heart valve formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0014032 "neural crest cell
development" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030502 "negative regulation of
bone mineralization" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030903 "notochord development"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0035622 "intrahepatic bile duct development"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043491 "protein kinase B signaling cascade"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0060009 "Sertoli cell
development" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060174 "limb bud formation" evidence=IEA]
[GO:0072190 "ureter urothelium development" evidence=IEA]
[GO:0072197 "ureter morphogenesis" evidence=IEA] [GO:2000138
"positive regulation of cell proliferation involved in heart
morphogenesis" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEP;IMP] [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0003203 "endocardial cushion morphogenesis"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=ISS] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=ISS] [GO:0035019 "somatic
stem cell maintenance" evidence=ISS] [GO:0042127 "regulation of
cell proliferation" evidence=ISS] [GO:0042981 "regulation of
apoptotic process" evidence=ISS] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=ISS] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=ISS]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IEP;ISS] [GO:0050680 "negative regulation of epithelial
cell proliferation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0060221 "retinal rod cell
differentiation" evidence=ISS] [GO:0060517 "epithelial cell
proliferation involved in prostatic bud elongation" evidence=ISS]
[GO:0060784 "regulation of cell proliferation involved in tissue
homeostasis" evidence=ISS] [GO:0061138 "morphogenesis of a
branching epithelium" evidence=ISS] [GO:0072289 "metanephric
nephron tubule formation" evidence=ISS] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0034236 "protein kinase A
catalytic subunit binding" evidence=IPI] [GO:0071347 "cellular
response to interleukin-1" evidence=IEP] [GO:0030850 "prostate
gland development" evidence=IEP] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0007173 "epidermal
growth factor receptor signaling pathway" evidence=ISS] [GO:0070371
"ERK1 and ERK2 cascade" evidence=ISS] [GO:0071260 "cellular
response to mechanical stimulus" evidence=ISS] [GO:0071364
"cellular response to epidermal growth factor stimulus"
evidence=ISS] [GO:0071504 "cellular response to heparin"
evidence=ISS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=IDA] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=IDA] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=IMP;IDA]
[GO:0071560 "cellular response to transforming growth factor beta
stimulus" evidence=IDA] [GO:0061036 "positive regulation of
cartilage development" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IDA] [GO:0006461 "protein
complex assembly" evidence=IDA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0090184 "positive regulation of kidney
development" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:0035326 "enhancer binding" evidence=IDA] [GO:0019933
"cAMP-mediated signaling" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP;IDA] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0003413 "chondrocyte differentiation
involved in endochondral bone morphogenesis" evidence=IMP]
[GO:0071300 "cellular response to retinoic acid" evidence=IEP]
[GO:0010564 "regulation of cell cycle process" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS;IMP] [GO:0003415 "chondrocyte
hypertrophy" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IMP]
[GO:0001502 "cartilage condensation" evidence=ISS] [GO:0003179
"heart valve morphogenesis" evidence=ISS] [GO:0030916 "otic vesicle
formation" evidence=ISS] [GO:0051216 "cartilage development"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0090103 "cochlea morphogenesis"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708 GO:GO:0007173
GO:GO:0045892 GO:GO:0043066 GO:GO:0006461 GO:GO:0030155
GO:GO:0071560 GO:GO:0019933 GO:GO:0070371 GO:GO:0071300
GO:GO:0030198 GO:GO:0014068 GO:GO:0007283 GO:GO:0003682
GO:GO:0003705 GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672
GO:GO:0071504 GO:GO:0001942 EMBL:CH471099 GO:GO:0032332
GO:GO:0030279 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0060008
GO:GO:0030916 GO:GO:2000020 GO:GO:0046533 GO:GO:0060174
GO:GO:0030903 GO:GO:0090103 GO:GO:0010564 GO:GO:0019100
GO:GO:0003179 GO:GO:0070168 GO:GO:0060018 GO:GO:0035622
GO:GO:0072190 GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:Z46629
EMBL:S74506 EMBL:S74504 EMBL:S74505 EMBL:BT006875 EMBL:BC007951
EMBL:BC056420 IPI:IPI00009713 PIR:A55204 RefSeq:NP_000337.1
UniGene:Hs.647409 PDB:1S9M PDB:1SX9 PDB:4EUW PDBsum:1S9M
PDBsum:1SX9 PDBsum:4EUW ProteinModelPortal:P48436 SMR:P48436
IntAct:P48436 STRING:P48436 PhosphoSite:P48436 DMDM:1351096
PRIDE:P48436 DNASU:6662 Ensembl:ENST00000245479 GeneID:6662
KEGG:hsa:6662 UCSC:uc002jiw.3 GeneCards:GC17P070117 HGNC:HGNC:11204
HPA:CAB022456 HPA:HPA001758 MIM:114290 MIM:278850 MIM:608160
neXtProt:NX_P48436 Orphanet:140 Orphanet:2138 PharmGKB:PA36041
InParanoid:P48436 OMA:GAGHVWM PhylomeDB:P48436 GenomeRNAi:6662
NextBio:25973 ArrayExpress:P48436 Bgee:P48436 CleanEx:HS_SOX9
Genevestigator:P48436 GermOnline:ENSG00000125398 Uniprot:P48436
Length = 509
Score = 159 (61.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
Score = 46 (21.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P +L H+ S +T S ++ + Y H G+ + +YST
Sbjct: 420 YSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYST 465
>UNIPROTKB|P61753 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9544
"Macaca mulatta" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0071364 "cellular response to epidermal
growth factor stimulus" evidence=ISS] [GO:0071504 "cellular
response to heparin" evidence=ISS] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0090103 "cochlea morphogenesis" evidence=ISS]
[GO:0090184 "positive regulation of kidney development"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:AF322900
RefSeq:NP_001028040.1 UniGene:Mmu.3543 ProteinModelPortal:P61753
SMR:P61753 STRING:P61753 PRIDE:P61753 GeneID:574208 KEGG:mcc:574208
InParanoid:P61753 NextBio:19987290 Uniprot:P61753
Length = 509
Score = 159 (61.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
Score = 46 (21.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P +L H+ S +T S ++ + Y H G+ + +YST
Sbjct: 420 YSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYST 465
>UNIPROTKB|P61754 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9600
"Pongo pygmaeus" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0071364 "cellular response to epidermal
growth factor stimulus" evidence=ISS] [GO:0071504 "cellular
response to heparin" evidence=ISS] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0090103 "cochlea morphogenesis" evidence=ISS]
[GO:0090184 "positive regulation of kidney development"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 GO:GO:0003415 GO:GO:0060517 GO:GO:0060729
GO:GO:0002683 GO:GO:0060784 EMBL:AF322898 ProteinModelPortal:P61754
SMR:P61754 STRING:P61754 PRIDE:P61754 InParanoid:P61754
Uniprot:P61754
Length = 509
Score = 159 (61.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
Score = 46 (21.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P +L H+ S +T S ++ + Y H G+ + +YST
Sbjct: 420 YSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYST 465
>UNIPROTKB|Q9BG89 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9598 "Pan
troglodytes" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0004672 "protein kinase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0006468
"protein phosphorylation" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0070168 "negative regulation of biomineral tissue development"
evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade" evidence=ISS]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071504 "cellular response to
heparin" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0072289 "metanephric nephron tubule formation"
evidence=ISS] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISS] [GO:0090103 "cochlea
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0019933 GO:GO:0070371 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0030279 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0001502 GO:GO:0001837 GO:GO:0050680
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0003413 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0003203 GO:GO:0032331 GO:GO:0045662
GO:GO:0060008 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0003179
GO:GO:0070168 GO:GO:0072289 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 CTD:6662 EMBL:AF322902 RefSeq:NP_001009029.1
UniGene:Ptr.6522 ProteinModelPortal:Q9BG89 SMR:Q9BG89 STRING:Q9BG89
GeneID:450101 KEGG:ptr:450101 InParanoid:Q9BG89 NextBio:20833065
Uniprot:Q9BG89
Length = 509
Score = 159 (61.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLGDQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
Score = 46 (21.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P +L H+ S +T S ++ + Y H G+ + +YST
Sbjct: 420 YSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYST 465
>UNIPROTKB|Q9BG91 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9483
"Callithrix jacchus" [GO:0001046 "core promoter sequence-specific
DNA binding" evidence=ISS] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001502 "cartilage
condensation" evidence=ISS] [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0002683 "negative regulation of immune system
process" evidence=ISS] [GO:0003170 "heart valve development"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0003203 "endocardial cushion morphogenesis" evidence=ISS]
[GO:0003413 "chondrocyte differentiation involved in endochondral
bone morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte
hypertrophy" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004672 "protein kinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006334 "nucleosome
assembly" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0007173 "epidermal growth
factor receptor signaling pathway" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0070168 "negative regulation of biomineral tissue development"
evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade" evidence=ISS]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071504 "cellular response to
heparin" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0072289 "metanephric nephron tubule formation"
evidence=ISS] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISS] [GO:0090103 "cochlea
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0019933 GO:GO:0070371 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0030279 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0001502 GO:GO:0001837 GO:GO:0050680
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0003413 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0003203 GO:GO:0032331 GO:GO:0045662
GO:GO:0060008 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0003179
GO:GO:0070168 GO:GO:0072289 HOVERGEN:HBG002061 InterPro:IPR022151
Pfam:PF12444 GO:GO:2000741 GO:GO:0072034 GO:GO:0060221
EMBL:AF322899 ProteinModelPortal:Q9BG91 SMR:Q9BG91
OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517 GO:GO:0060729
GO:GO:0002683 GO:GO:0060784 Uniprot:Q9BG91
Length = 509
Score = 159 (61.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
Score = 46 (21.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 167 FMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
+ P +L H+ S +T S ++ + Y H G+ + +YST
Sbjct: 420 YSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYST 465
>ZFIN|ZDB-GENE-990715-6 [details] [associations]
symbol:sox21a "SRY-box containing gene 21a"
species:7955 "Danio rerio" [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA;ISS;IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;IMP] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-990715-6 GO:GO:0005634 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009953
GeneTree:ENSGT00690000101940 GO:GO:0001071 HSSP:P48431
eggNOG:NOG302715 HOGENOM:HOG000231647 OrthoDB:EOG40K80Q
EMBL:AF101266 EMBL:U85092 EMBL:AL591389 EMBL:BC056274 EMBL:BC065639
IPI:IPI00506374 RefSeq:NP_571361.1 UniGene:Dr.132865
ProteinModelPortal:Q7SZS1 SMR:Q7SZS1 PRIDE:Q7SZS1
Ensembl:ENSDART00000049339 GeneID:30543 KEGG:dre:30543 CTD:30543
InParanoid:Q9YH21 NextBio:20806923 Bgee:Q7SZS1 Uniprot:Q7SZS1
Length = 239
Score = 155 (59.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D ++RPMNAFM++S+ R K+ +P N +SK LG W L EK+ + + A ++
Sbjct: 6 DHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAKRLR 65
Query: 128 EAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEG 166
H K HP++K+ + K K+ R ++ GEG
Sbjct: 66 AVHMKEHPDYKYRPRRKPKNLIKKDRYHF-NVTYNLGEG 103
>UNIPROTKB|Q9W757 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001755 "neural
crest cell migration" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048546 "digestive
tract morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0060959 "cardiac
neuron development" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0045944 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0031315 EMBL:AF152356
EMBL:AJ245601 IPI:IPI00599244 RefSeq:NP_990123.1 UniGene:Gga.4428
ProteinModelPortal:Q9W757 SMR:Q9W757 STRING:Q9W757
Ensembl:ENSGALT00000020083 GeneID:395573 KEGG:gga:395573 CTD:6663
eggNOG:NOG295709 GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876
HOVERGEN:HBG002061 InParanoid:Q9W757 KO:K09270 OMA:GPSMASD
OrthoDB:EOG41C6WH NextBio:20815647 GO:GO:0060959 InterPro:IPR022151
Pfam:PF12444 Uniprot:Q9W757
Length = 461
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENS 178
++ H K HP++K+ + ++ G G+ G + EG G H++N+
Sbjct: 153 RLRMQHKKDHPDYKYQPRRRKNGKATQGEGE-GQV-EGEAGGAASIQA-HYKNA 203
>WB|WBGene00004771 [details] [associations]
symbol:sem-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 EMBL:FO080144 eggNOG:NOG130659
GeneTree:ENSGT00690000101789 HSSP:P35710 RefSeq:NP_740846.1
ProteinModelPortal:Q8T3B9 SMR:Q8T3B9 EnsemblMetazoa:C32E12.5.1
EnsemblMetazoa:C32E12.5.2 GeneID:172162 KEGG:cel:CELE_C32E12.5
UCSC:C32E12.5.1 CTD:172162 WormBase:C32E12.5 HOGENOM:HOG000019701
InParanoid:Q8T3B9 OMA:PSEFGHA NextBio:874275 Uniprot:Q8T3B9
Length = 404
Score = 156 (60.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+S + I+RPMNAFM++S+ R K+ + P+ N +SK LG W SL EEK + A
Sbjct: 88 KSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLGSRWRSLTDEEKAPFVAEAE 147
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSS 148
++ H + +P++K+ + K K +
Sbjct: 148 RLRVCHMQEYPDYKYKPRKKPKKN 171
Score = 45 (20.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 218 GNVKQPTTPTVIVSKQSNIEMQNASVAAANAELMQQADKNKD--SEQQKYRNF 268
G ++QP P Q+ + Q A A+ + Q+ N D SE Q+++NF
Sbjct: 174 GTLQQPAQP------QAP-QQQQAPPRGASPQARQRKRPNTDQQSETQQFQNF 219
>MGI|MGI:103559 [details] [associations]
symbol:Sox18 "SRY-box containing gene 18" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001525 "angiogenesis" evidence=IGI] [GO:0001568 "blood vessel
development" evidence=IMP] [GO:0001570 "vasculogenesis"
evidence=IGI] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0001944 "vasculature development" evidence=IMP] [GO:0001945
"lymph vessel development" evidence=IMP] [GO:0001946
"lymphangiogenesis" evidence=ISO;IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007507 "heart development" evidence=IMP]
[GO:0022405 "hair cycle process" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IGI] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048469 "cell maturation"
evidence=IDA] [GO:0048866 "stem cell fate specification"
evidence=IDA] [GO:0060214 "endocardium formation" evidence=IGI]
[GO:0060836 "lymphatic endothelial cell differentiation"
evidence=IMP] [GO:0060956 "endocardial cell differentiation"
evidence=IGI] [GO:0061028 "establishment of endothelial barrier"
evidence=ISO] [GO:0072091 "regulation of stem cell proliferation"
evidence=IDA] InterPro:IPR009071 MGI:MGI:103559 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0001942 GO:GO:0001946
GO:GO:0060836 GO:GO:0043534 GO:GO:0001570 GO:GO:0048469
GO:GO:0035050 GO:GO:0072091 GO:GO:0060956 GO:GO:0060214
GO:GO:0061028 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
HOVERGEN:HBG000517 GO:GO:0048866 CTD:54345 eggNOG:NOG252325
OMA:YLNCSRT OrthoDB:EOG4KSPKP EMBL:L35032 EMBL:AF288518
EMBL:BC006612 EMBL:L29086 IPI:IPI00377924 RefSeq:NP_033262.2
UniGene:Mm.264904 ProteinModelPortal:P43680 SMR:P43680
STRING:P43680 PhosphoSite:P43680 PRIDE:P43680
Ensembl:ENSMUST00000054491 GeneID:20672 KEGG:mmu:20672
InParanoid:P43680 NextBio:299155 Bgee:P43680 CleanEx:MM_SOX18
Genevestigator:P43680 GermOnline:ENSMUSG00000046470 Uniprot:P43680
Length = 377
Score = 161 (61.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 69 RIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKE 128
RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W L EK+ + E A ++
Sbjct: 78 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKRPFVEEAERLRV 137
Query: 129 AHFKAHPEWKWCSKDKRKS 147
H + HP +K+ + K+++
Sbjct: 138 QHLRDHPNYKYRPRRKKQA 156
>RGD|1311718 [details] [associations]
symbol:Sox18 "SRY (sex determining region Y)-box 18"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0001568 "blood vessel development" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001942 "hair follicle
development" evidence=IEA;ISO] [GO:0001944 "vasculature
development" evidence=ISO] [GO:0001945 "lymph vessel development"
evidence=ISO] [GO:0001946 "lymphangiogenesis" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0022405 "hair cycle process" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IEA;ISO] [GO:0042789
"mRNA transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043534 "blood vessel endothelial cell migration"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0048469 "cell
maturation" evidence=IEA;ISO] [GO:0048866 "stem cell fate
specification" evidence=IEA;ISO] [GO:0060214 "endocardium
formation" evidence=IEA;ISO] [GO:0060836 "lymphatic endothelial
cell differentiation" evidence=IEA;ISO] [GO:0060956 "endocardial
cell differentiation" evidence=IEA;ISO] [GO:0061028 "establishment
of endothelial barrier" evidence=IEA;ISO] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA;ISO] InterPro:IPR009071
Pfam:PF00505 RGD:1311718 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0001942 GO:GO:0001946 GO:GO:0060836
GO:GO:0043534 GO:GO:0001570 GO:GO:0048469 GO:GO:0035050
GO:GO:0072091 GO:GO:0060956 GO:GO:0060214 GO:GO:0061028
EMBL:CH474066 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
HOVERGEN:HBG000517 GO:GO:0048866 CTD:54345 eggNOG:NOG252325
OMA:YLNCSRT OrthoDB:EOG4KSPKP EMBL:BC097973 IPI:IPI00211524
RefSeq:NP_001019952.1 UniGene:Rn.22446 SMR:Q4V7E4
Ensembl:ENSRNOT00000021790 GeneID:311723 KEGG:rno:311723
UCSC:RGD:1311718 InParanoid:Q4V7E4 NextBio:664090
Genevestigator:Q4V7E4 Uniprot:Q4V7E4
Length = 377
Score = 161 (61.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 69 RIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKE 128
RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W L EK+ + E A ++
Sbjct: 78 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKRPFVEEAERLRV 137
Query: 129 AHFKAHPEWKWCSKDKRKS 147
H + HP +K+ + K+++
Sbjct: 138 QHLRDHPNYKYRPRRKKQA 156
>UNIPROTKB|P41225 [details] [associations]
symbol:SOX3 "Transcription factor SOX-3" species:9606 "Homo
sapiens" [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0048515 "spermatid differentiation" evidence=IEA] [GO:0060009
"Sertoli cell development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISS] [GO:0060324 "face development"
evidence=ISS] [GO:0007423 "sensory organ development" evidence=ISS]
[GO:0021983 "pituitary gland development" evidence=ISS] [GO:0021854
"hypothalamus development" evidence=ISS] [GO:0007530 "sex
determination" evidence=IMP] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007417
"central nervous system development" evidence=TAS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007423
GO:GO:0045665 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009 GO:GO:0060324
GO:GO:0021983 GO:GO:0000979 GO:GO:0001106 GO:GO:0021854
GO:GO:0048515 eggNOG:NOG321816 GO:GO:0007530 Orphanet:3157
Orphanet:90695 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658 EMBL:X71135 EMBL:AF264713
EMBL:AL121875 EMBL:BC093863 EMBL:BC093865 EMBL:X65665
IPI:IPI00240510 PIR:I38239 PIR:S22942 RefSeq:NP_005625.2
UniGene:Hs.157429 ProteinModelPortal:P41225 SMR:P41225
STRING:P41225 PhosphoSite:P41225 DMDM:48429228 PRIDE:P41225
Ensembl:ENST00000370536 GeneID:6658 KEGG:hsa:6658 UCSC:uc004fbd.1
GeneCards:GC0XM139585 HGNC:HGNC:11199 MIM:300123 MIM:300833
MIM:312000 MIM:313430 neXtProt:NX_P41225 Orphanet:79495
Orphanet:67045 PharmGKB:PA36036 InParanoid:P41225 OMA:AQSYMNV
PhylomeDB:P41225 GenomeRNAi:6658 NextBio:25955 Bgee:P41225
CleanEx:HS_SOX3 Genevestigator:P41225 GermOnline:ENSG00000134595
Uniprot:P41225
Length = 446
Score = 162 (62.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
GA G +DR++RPMNAFM++S+ R K+ +P N +SK LG W L EK
Sbjct: 126 GASGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEK 185
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 186 RPFIDEAKRLRAVHMKEYPDYKY--RPRRKTKT 216
>UNIPROTKB|O73668 [details] [associations]
symbol:Sox9 "SOX9" species:9031 "Gallus gallus" [GO:0001046
"core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0001708 "cell fate
specification" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IEA] [GO:0001942 "hair follicle
development" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003413 "chondrocyte
differentiation involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0003415 "chondrocyte hypertrophy" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004672 "protein
kinase activity" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=IEA] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0010564 "regulation of
cell cycle process" evidence=IEA] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=IEA] [GO:0014032 "neural
crest cell development" evidence=IEA] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA]
[GO:0019100 "male germ-line sex determination" evidence=IEA]
[GO:0019933 "cAMP-mediated signaling" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030903 "notochord development"
evidence=IEA] [GO:0030916 "otic vesicle formation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0034236 "protein kinase A
catalytic subunit binding" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0035622 "intrahepatic bile duct
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=IEA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0060018
"astrocyte fate commitment" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060221 "retinal rod cell
differentiation" evidence=IEA] [GO:0060517 "epithelial cell
proliferation involved in prostatic bud elongation" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060784 "regulation of cell proliferation
involved in tissue homeostasis" evidence=IEA] [GO:0061036 "positive
regulation of cartilage development" evidence=IEA] [GO:0070371
"ERK1 and ERK2 cascade" evidence=IEA] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEA] [GO:0071300
"cellular response to retinoic acid" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0071364
"cellular response to epidermal growth factor stimulus"
evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEA] [GO:0072034 "renal vesicle
induction" evidence=IEA] [GO:0072190 "ureter urothelium
development" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090103 "cochlea
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0032332 GO:GO:0090090
GO:GO:0071260 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0045732 GO:GO:0050680 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0030502 GO:GO:2000138 GO:GO:0061036 GO:GO:0032331
GO:GO:0045662 GO:GO:2000020 GO:GO:0010564
GeneTree:ENSGT00670000097649 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 GO:GO:2000741
GO:GO:0072034 GO:GO:0002683 CTD:6662 UniGene:Gga.890
EMBL:AADN02030063 EMBL:AB012236 IPI:IPI00603266 RefSeq:NP_989612.1
SMR:O73668 STRING:O73668 Ensembl:ENSGALT00000006994 GeneID:374148
KEGG:gga:374148 InParanoid:O73668 NextBio:20813662 Uniprot:O73668
Length = 494
Score = 157 (60.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGS 158
++ H K HP++K+ + ++ G + GS
Sbjct: 160 RLRVQHKKDHPDYKYQPRRRKSVKNGQSEQEEGS 193
Score = 46 (21.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 166 GFMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
G+ +L+H+ +S +T S ++ + Y H G+ +YST
Sbjct: 404 GYGSFNLQHYGSSYPPITRSQYDYTEHQNSGSYYSHAAGQSGGLYST 450
>UNIPROTKB|F1P307 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9031
"Gallus gallus" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0001503 "ossification" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001708
"cell fate specification" evidence=IEA] [GO:0001837 "epithelial to
mesenchymal transition" evidence=IEA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002683 "negative regulation of immune system process"
evidence=IEA] [GO:0003188 "heart valve formation" evidence=IEA]
[GO:0003203 "endocardial cushion morphogenesis" evidence=IEA]
[GO:0003413 "chondrocyte differentiation involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0003415 "chondrocyte
hypertrophy" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0010564 "regulation of cell cycle process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0014032 "neural crest cell
development" evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0019100
"male germ-line sex determination" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0030155 "regulation of
cell adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030502 "negative regulation of
bone mineralization" evidence=IEA] [GO:0030858 "positive regulation
of epithelial cell differentiation" evidence=IEA] [GO:0030879
"mammary gland development" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0034236 "protein
kinase A catalytic subunit binding" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0035622
"intrahepatic bile duct development" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043491 "protein kinase B signaling cascade" evidence=IEA]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=IEA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0060009 "Sertoli cell development"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0060174 "limb bud formation" evidence=IEA] [GO:0060221 "retinal
rod cell differentiation" evidence=IEA] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=IEA] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=IEA] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0061036 "positive regulation of cartilage development"
evidence=IEA] [GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071347 "cellular response to interleukin-1"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071504 "cellular response to
heparin" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0072034
"renal vesicle induction" evidence=IEA] [GO:0072190 "ureter
urothelium development" evidence=IEA] [GO:0072197 "ureter
morphogenesis" evidence=IEA] [GO:0072289 "metanephric nephron
tubule formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0032332 GO:GO:0090090
GO:GO:0071260 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0045732 GO:GO:0050680 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0030502 GO:GO:2000138 GO:GO:0061036 GO:GO:0032331
GO:GO:0045662 GO:GO:2000020 GO:GO:0010564
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0002683 OMA:GAGHVWM
EMBL:AADN02030063 IPI:IPI00818672 Ensembl:ENSGALT00000038513
Uniprot:F1P307
Length = 496
Score = 157 (60.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 102 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 161
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGS 158
++ H K HP++K+ + ++ G + GS
Sbjct: 162 RLRVQHKKDHPDYKYQPRRRKSVKNGQSEQEEGS 195
Score = 46 (21.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 166 GFMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
G+ +L+H+ +S +T S ++ + Y H G+ +YST
Sbjct: 406 GYGSFNLQHYGSSYPPITRSQYDYTEHQNSGSYYSHAAGQSGGLYST 452
>UNIPROTKB|P56693 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9606
"Homo sapiens" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0048484 "enteric nervous system development" evidence=IEA]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048863 "stem
cell differentiation" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0048863
GO:GO:0007422 GO:GO:0006357 GO:GO:0003682 GO:GO:0003705
GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003713 GO:GO:0048589
GO:GO:0090090 GO:GO:0009653 GO:GO:0030318 GO:GO:0048709
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546
GO:GO:0048469 EMBL:AL031587 Orphanet:897 GO:GO:0014015 Orphanet:895
CTD:6663 eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
KO:K09270 InterPro:IPR022151 Pfam:PF12444 EMBL:AJ001183
EMBL:CR456584 EMBL:BT020029 EMBL:BC002824 EMBL:BC007595
IPI:IPI00010781 RefSeq:NP_008872.1 UniGene:Hs.376984
ProteinModelPortal:P56693 SMR:P56693 IntAct:P56693
MINT:MINT-1781695 STRING:P56693 PhosphoSite:P56693 DMDM:6175075
PRIDE:P56693 DNASU:6663 Ensembl:ENST00000360880
Ensembl:ENST00000396884 GeneID:6663 KEGG:hsa:6663 UCSC:uc003aun.1
GeneCards:GC22M038366 HGNC:HGNC:11190 HPA:CAB003171 MIM:602229
MIM:609136 MIM:611584 MIM:613266 neXtProt:NX_P56693 Orphanet:163746
PharmGKB:PA36027 InParanoid:P56693 OMA:YYGHSSQ PhylomeDB:P56693
GenomeRNAi:6663 NextBio:25977 ArrayExpress:P56693 Bgee:P56693
CleanEx:HS_SOX10 Genevestigator:P56693 GermOnline:ENSG00000100146
Uniprot:P56693
Length = 466
Score = 157 (60.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 30/100 (30%), Positives = 56/100 (56%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 99 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 158
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEG 162
++ H K HP++K+ + ++ G + G ++G
Sbjct: 159 RLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEAEQG 198
Score = 45 (20.9 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 317 SEPPGGGQENKGTGPQTSHFK 337
+E PGG E GT +H+K
Sbjct: 188 AECPGGEAEQGGTAAIQAHYK 208
>MGI|MGI:98507 [details] [associations]
symbol:Tcf7 "transcription factor 7, T cell specific"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IBA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IBA] [GO:0007420 "brain
development" evidence=IBA] [GO:0008013 "beta-catenin binding"
evidence=ISO;IBA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IDA] [GO:0021915 "neural tube development" evidence=IGI]
[GO:0022008 "neurogenesis" evidence=IBA] [GO:0030538 "embryonic
genitalia morphogenesis" evidence=IGI] [GO:0033153 "T cell receptor
V(D)J recombination" evidence=IGI] [GO:0042127 "regulation of cell
proliferation" evidence=IDA] [GO:0042981 "regulation of apoptotic
process" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IBA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IBA] [GO:0046632 "alpha-beta T cell
differentiation" evidence=IGI] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0048619 "embryonic hindgut
morphogenesis" evidence=IGI] [GO:0048699 "generation of neurons"
evidence=IBA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IBA] [GO:0071353 "cellular response to
interleukin-4" evidence=ISO] InterPro:IPR009071 InterPro:IPR024940
MGI:MGI:98507 Pfam:PF00505 GO:GO:0007420 GO:GO:0042981
GO:GO:0043565 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0042127 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0021915 GO:GO:0008013 GO:GO:0046632 GO:GO:0060070
GO:GO:0033153 GO:GO:0048619 GO:GO:0048699 GO:GO:0071353
GO:GO:0048557 GO:GO:0030538 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
CTD:6932 KO:K02620 ChiTaRS:TCF7 EMBL:X61385 IPI:IPI00118921
IPI:IPI00990113 PIR:JH0401 RefSeq:NP_033357.1 UniGene:Mm.31630
ProteinModelPortal:Q00417 SMR:Q00417 IntAct:Q00417 STRING:Q00417
PhosphoSite:Q00417 PRIDE:Q00417 Ensembl:ENSMUST00000086844
Ensembl:ENSMUST00000109071 GeneID:21414 KEGG:mmu:21414
InParanoid:Q00417 OMA:HISADIN OrthoDB:EOG4ZGPCV NextBio:300706
Bgee:Q00417 CleanEx:MM_TCF7 Genevestigator:Q00417
GermOnline:ENSMUSG00000000782 Uniprot:Q00417
Length = 419
Score = 161 (61.7 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 39/121 (32%), Positives = 67/121 (55%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R+L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 285 RNLKTQAEPKAEKEAKKPVIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 344
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEW---------KWCSKDK-RKSSTGSGRGKLGSMD 160
L EE+ KY+ELA + ++ H + +P W K S++K ++S+TG R G+
Sbjct: 345 LSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYP 404
Query: 161 E 161
E
Sbjct: 405 E 405
>ZFIN|ZDB-GENE-011207-1 [details] [associations]
symbol:sox10 "SRY-box containing gene 10"
species:7955 "Danio rerio" [GO:0014044 "Schwann cell development"
evidence=IMP] [GO:0048840 "otolith development" evidence=IMP]
[GO:0048839 "inner ear development" evidence=IGI;IMP] [GO:0048752
"semicircular canal morphogenesis" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI] [GO:0001755
"neural crest cell migration" evidence=IMP] [GO:0048484 "enteric
nervous system development" evidence=IMP] [GO:0010001 "glial cell
differentiation" evidence=IGI] [GO:0071600 "otic vesicle
morphogenesis" evidence=IMP] [GO:0030318 "melanocyte
differentiation" evidence=IGI] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0014037 "Schwann cell
differentiation" evidence=IMP] [GO:0050768 "negative regulation of
neurogenesis" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-011207-1 GO:GO:0001755 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0010628
GO:GO:0014044 GO:GO:0030318 GO:GO:0048709 GO:GO:0050768
GO:GO:0048484 GO:GO:0048840 GO:GO:0048752 GO:GO:0071600 CTD:6663
GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 OMA:GPSMASD InterPro:IPR022151
Pfam:PF12444 HSSP:P48432 EMBL:CU695115 EMBL:BC163868 EMBL:BC163883
EMBL:AF402677 IPI:IPI00512024 RefSeq:NP_571950.1 UniGene:Dr.83682
SMR:Q90XD1 STRING:Q90XD1 Ensembl:ENSDART00000112979 GeneID:140616
KEGG:dre:140616 NextBio:20797027 Uniprot:Q90XD1
Length = 485
Score = 162 (62.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 38/118 (32%), Positives = 67/118 (56%)
Query: 62 TGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHE 121
+G +SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E
Sbjct: 100 SGSKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNETDKRPFIE 159
Query: 122 LASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG--EGFMPDDLEHFEN 177
A +++ H K +PE+K+ + +RK+ GK GS E EG + H+++
Sbjct: 160 EAERLRKQHKKDYPEYKYQPR-RRKN------GKPGSSSEADAHSEGEVSHSQSHYKS 210
>UNIPROTKB|F1Q1X1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AAEX03015533 EMBL:AAEX03015534
EMBL:AAEX03015535 Ensembl:ENSCAFT00000017515 Uniprot:F1Q1X1
Length = 438
Score = 161 (61.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 136 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 195
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 196 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 251
>ZFIN|ZDB-GENE-010111-1 [details] [associations]
symbol:sox19b "SRY-box containing gene 19b"
species:7955 "Danio rerio" [GO:0005667 "transcription factor
complex" evidence=IC] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-010111-1
GO:GO:0051091 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 EMBL:CR848737 IPI:IPI00495401
Ensembl:ENSDART00000058910 ArrayExpress:F1R211 Bgee:F1R211
Uniprot:F1R211
Length = 293
Score = 157 (60.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 63 GLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
G+ D+++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + +
Sbjct: 46 GVDPMDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDE 105
Query: 123 ASEVKEAHFKAHPEWKWCSKDKRKS 147
A ++ H K +P++K+ K +RK+
Sbjct: 106 AKRLRAVHMKEYPDYKY--KPRRKT 128
>UNIPROTKB|F1NEB1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AADN02030905 EMBL:AADN02030906
EMBL:AADN02030907 EMBL:AADN02030908 EMBL:AADN02030909
IPI:IPI00818186 Ensembl:ENSGALT00000033106 ArrayExpress:F1NEB1
Uniprot:F1NEB1
Length = 450
Score = 161 (61.7 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 150 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 209
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 210 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 265
>MGI|MGI:1202879 [details] [associations]
symbol:Tcf7l2 "transcription factor 7 like 2, T cell
specific, HMG box" species:10090 "Mus musculus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO] [GO:0001103
"RNA polymerase II repressing transcription factor binding"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IBA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0008013
"beta-catenin binding" evidence=ISO;IDA;IPI] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0009749 "response to glucose
stimulus" evidence=IMP] [GO:0010909 "positive regulation of heparan
sulfate proteoglycan biosynthetic process" evidence=ISO]
[GO:0014003 "oligodendrocyte development" evidence=IMP] [GO:0016055
"Wnt receptor signaling pathway" evidence=IGI;IDA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0021915 "neural tube
development" evidence=IGI] [GO:0021983 "pituitary gland
development" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IGI] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IGI] [GO:0031641 "regulation of
myelination" evidence=IMP] [GO:0032024 "positive regulation of
insulin secretion" evidence=ISO;IMP] [GO:0032092 "positive
regulation of protein binding" evidence=ISO] [GO:0032252 "secretory
granule localization" evidence=IMP] [GO:0032350 "regulation of
hormone metabolic process" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
evidence=IGI;IMP] [GO:0035257 "nuclear hormone receptor binding"
evidence=ISO] [GO:0035411 "catenin import into nucleus"
evidence=IDA] [GO:0040037 "negative regulation of fibroblast growth
factor receptor signaling pathway" evidence=IMP] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IGI]
[GO:0042593 "glucose homeostasis" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IBA;IDA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=ISO]
[GO:0043588 "skin development" evidence=IGI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IDA;IBA]
[GO:0044334 "canonical Wnt receptor signaling pathway involved in
positive regulation of epithelial to mesenchymal transition"
evidence=ISO] [GO:0045295 "gamma-catenin binding" evidence=ISO]
[GO:0045444 "fat cell differentiation" evidence=ISO] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA] [GO:0046621 "negative regulation of organ
growth" evidence=IMP] [GO:0046827 "positive regulation of protein
export from nucleus" evidence=ISO] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0048619 "embryonic hindgut
morphogenesis" evidence=IGI] [GO:0048625 "myoblast cell fate
commitment" evidence=ISO;IMP] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IMP] [GO:0048660 "regulation of
smooth muscle cell proliferation" evidence=ISO] [GO:0048713
"regulation of oligodendrocyte differentiation" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=ISO] [GO:0060070 "canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:0060325 "face
morphogenesis" evidence=IGI] [GO:0061178 "regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=ISO;IMP] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] [GO:0070369 "beta-catenin-TCF7L2 complex"
evidence=ISO] [GO:0071664 "catenin-TCF7L2 complex" evidence=IDA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR009071
InterPro:IPR024940 MGI:MGI:1202879 Pfam:PF00505 GO:GO:0005829
GO:GO:0043588 GO:GO:0016605 GO:GO:0009749 GO:GO:0043565
GO:GO:0045944 GO:GO:0032024 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043065
GO:GO:0048641 GO:GO:0045599 GO:GO:0042475 GO:GO:0035019
GO:GO:0021915 GO:GO:0021983 GO:GO:0030282 GO:GO:0008013
GO:GO:0035411 GO:GO:0060325 GO:GO:0046621 GO:GO:0060070
GO:GO:0014003 GO:GO:0050679 GO:GO:0030514 GO:GO:0048619
GO:GO:0061178 GO:GO:0031641 GO:GO:0040037 GO:GO:0048713
GO:GO:0048625 GO:GO:0048557 GO:GO:0030538 GO:GO:0032252
CleanEx:MM_TCF4 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
GeneTree:ENSGT00390000009964 CTD:6934 KO:K04491 OrthoDB:EOG43XV3J
ChiTaRS:TCF7L2 EMBL:AJ223070 EMBL:AF107298 EMBL:AF107299
EMBL:AF363722 EMBL:AF363724 EMBL:AF363725 EMBL:AF363726
EMBL:AY072035 EMBL:AK048536 EMBL:AC118695 EMBL:AC137148
EMBL:AC157916 IPI:IPI00129307 IPI:IPI00224936 IPI:IPI00224938
IPI:IPI00224939 IPI:IPI00224941 IPI:IPI00830945 IPI:IPI00831494
IPI:IPI00831648 IPI:IPI00918384 RefSeq:NP_001136390.1
RefSeq:NP_001136393.1 RefSeq:NP_001136396.1 UniGene:Mm.139815
ProteinModelPortal:Q924A0 SMR:Q924A0 DIP:DIP-40920N IntAct:Q924A0
MINT:MINT-421706 STRING:Q924A0 PhosphoSite:Q924A0 PRIDE:Q924A0
Ensembl:ENSMUST00000111646 Ensembl:ENSMUST00000111649
Ensembl:ENSMUST00000111651 Ensembl:ENSMUST00000111652
Ensembl:ENSMUST00000111659 GeneID:21416 KEGG:mmu:21416
UCSC:uc008hya.2 UCSC:uc008hyb.2 UCSC:uc008hyh.2 UCSC:uc008hyk.2
UCSC:uc008hyl.2 NextBio:300716 Bgee:Q924A0 Genevestigator:Q924A0
GermOnline:ENSMUSG00000024985 GO:GO:0071664 Uniprot:Q924A0
Length = 459
Score = 161 (61.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 298 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 357
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 358 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 413
>UNIPROTKB|O42342 [details] [associations]
symbol:sox7 "Transcription factor Sox-7" species:8355
"Xenopus laevis" [GO:0001706 "endoderm formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007507 "heart development"
evidence=IMP] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0048793 "pronephros development" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0030154 GO:GO:0043565 GO:GO:0045944 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0030178 GO:GO:0048793 GO:GO:0001706 HSSP:P48431
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270 CTD:83595
EMBL:D83649 RefSeq:NP_001079337.1 UniGene:Xl.1241
ProteinModelPortal:O42342 SMR:O42342 GeneID:378665 KEGG:xla:378665
Xenbase:XB-GENE-865761 Uniprot:O42342
Length = 362
Score = 159 (61.0 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ RIRRPMNAFM+++K R ++ +P+ N +SK+LG+ W +L P +K+ Y E A
Sbjct: 38 SETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSPAQKRPYVEEAER 97
Query: 126 VKEAHFKAHPEWKWCSKDKRK 146
++ H + +P +K+ + K++
Sbjct: 98 LRVQHMQDYPNYKYRPRRKKQ 118
>UNIPROTKB|Q28GD5 [details] [associations]
symbol:sox7 "Transcription factor Sox-7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0001706 "endoderm formation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007507
"heart development" evidence=ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048793 "pronephros development" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0001570 GO:GO:0048793 GO:GO:0001706 eggNOG:NOG242943
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
CTD:83595 OrthoDB:EOG447FTC EMBL:CR761431 EMBL:BC170859
RefSeq:NP_001016326.1 UniGene:Str.66419 ProteinModelPortal:Q28GD5
SMR:Q28GD5 STRING:Q28GD5 Ensembl:ENSXETT00000001530 GeneID:549080
KEGG:xtr:549080 Xenbase:XB-GENE-488067 OMA:SFECSAG Bgee:Q28GD5
Uniprot:Q28GD5
Length = 362
Score = 159 (61.0 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ RIRRPMNAFM+++K R ++ +P+ N +SK+LG+ W +L P +K+ Y E A
Sbjct: 38 SETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSPAQKRPYVEEAER 97
Query: 126 VKEAHFKAHPEWKWCSKDKRK 146
++ H + +P +K+ + K++
Sbjct: 98 LRVQHMQDYPNYKYRPRRKKQ 118
>UNIPROTKB|E1BYU0 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007050 "cell
cycle arrest" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010909 "positive regulation of heparan sulfate proteoglycan
biosynthetic process" evidence=IEA] [GO:0014003 "oligodendrocyte
development" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0030282
"bone mineralization" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=IEA] [GO:0032024 "positive
regulation of insulin secretion" evidence=IEA] [GO:0032092
"positive regulation of protein binding" evidence=IEA] [GO:0032252
"secretory granule localization" evidence=IEA] [GO:0032350
"regulation of hormone metabolic process" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0035411 "catenin import into nucleus"
evidence=IEA] [GO:0040037 "negative regulation of fibroblast growth
factor receptor signaling pathway" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0044334 "canonical Wnt receptor signaling pathway involved in
positive regulation of epithelial to mesenchymal transition"
evidence=IEA] [GO:0045295 "gamma-catenin binding" evidence=IEA]
[GO:0045444 "fat cell differentiation" evidence=IEA] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046621 "negative
regulation of organ growth" evidence=IEA] [GO:0046827 "positive
regulation of protein export from nucleus" evidence=IEA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA]
[GO:0048619 "embryonic hindgut morphogenesis" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048641 "regulation of skeletal muscle tissue development"
evidence=IEA] [GO:0048660 "regulation of smooth muscle cell
proliferation" evidence=IEA] [GO:0048713 "regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0060325 "face morphogenesis"
evidence=IEA] [GO:0061178 "regulation of insulin secretion involved
in cellular response to glucose stimulus" evidence=IEA] [GO:0070016
"armadillo repeat domain binding" evidence=IEA] [GO:0070369
"beta-catenin-TCF7L2 complex" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0046827 GO:GO:0032092 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0032024 GO:GO:0003700 GO:GO:0007050
GO:GO:0003682 GO:GO:0042593 GO:GO:0005667 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0043065 GO:GO:0048641 GO:GO:0051897
GO:GO:0045599 GO:GO:0043433 GO:GO:0090090 GO:GO:0045444
GO:GO:0048660 GO:GO:0035411 GO:GO:0046621 GO:GO:0043570
GO:GO:0050679 GO:GO:0032993 GO:GO:0030514 GO:GO:0061178
GO:GO:0031641 GO:GO:0040037 GO:GO:0070369 GO:GO:0044334
GO:GO:0010909 GO:GO:0032350 GO:GO:0032252 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
OMA:EPWCLES EMBL:AADN02030905 EMBL:AADN02030906 EMBL:AADN02030907
EMBL:AADN02030908 EMBL:AADN02030909 IPI:IPI00684907
Ensembl:ENSGALT00000014436 ArrayExpress:E1BYU0 Uniprot:E1BYU0
Length = 468
Score = 161 (61.7 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 168 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 227
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 228 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 283
>UNIPROTKB|D4PHA3 [details] [associations]
symbol:TCF7 "Transcription factor 7" species:9606 "Homo
sapiens" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HOGENOM:HOG000116032 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 HGNC:HGNC:11639 ChiTaRS:TCF7 EMBL:AC008608
EMBL:AC011336 IPI:IPI00976178 ProteinModelPortal:D4PHA3 SMR:D4PHA3
Ensembl:ENST00000432532 UCSC:uc003kyz.3 ArrayExpress:D4PHA3
Bgee:D4PHA3 Uniprot:D4PHA3
Length = 366
Score = 159 (61.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R+L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 135 RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 194
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEWKW---CSKDKRKS 147
L EE+ KY+ELA + ++ H + +P W K KR+S
Sbjct: 195 LSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRS 234
>UNIPROTKB|F2Z520 [details] [associations]
symbol:SOX21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043588 GO:GO:0003677 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 EMBL:CU633813
Ensembl:ENSSSCT00000010410 Uniprot:F2Z520
Length = 416
Score = 160 (61.4 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D ++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A ++
Sbjct: 157 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLR 216
Query: 128 EAHFKAHPEWKWCSKDKRKSST 149
H K HP++K+ + +RK T
Sbjct: 217 AMHMKEHPDYKY--RPRRKPKT 236
>ZFIN|ZDB-GENE-011026-1 [details] [associations]
symbol:sox32 "SRY-box containing gene 32"
species:7955 "Danio rerio" [GO:0001706 "endoderm formation"
evidence=IDA;IMP] [GO:0003007 "heart morphogenesis" evidence=IMP]
[GO:0007498 "mesoderm development" evidence=IDA] [GO:0001885
"endothelial cell development" evidence=IMP] [GO:0035050 "embryonic
heart tube development" evidence=IMP] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IGI;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007493 "endodermal cell
fate determination" evidence=IMP] [GO:0042074 "cell migration
involved in gastrulation" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IMP] [GO:0061035 "regulation of cartilage
development" evidence=IGI;IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-011026-1 GO:GO:0005634 GO:GO:0045893 GO:GO:0007498
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007368 GO:GO:0042074
GO:GO:0001885 GO:GO:0035050 GO:GO:0007493 GO:GO:0061035 HSSP:P48432
GO:GO:0003262 EMBL:BC097087 EMBL:AF362749 IPI:IPI00494054
RefSeq:NP_571926.1 UniGene:Dr.133216 SMR:Q90Z46 STRING:Q90Z46
GeneID:116990 KEGG:dre:116990 CTD:116990 HOVERGEN:HBG098276
InParanoid:Q90Z46 NextBio:20796959 Uniprot:Q90Z46
Length = 307
Score = 157 (60.3 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 52/188 (27%), Positives = 89/188 (47%)
Query: 42 ESQRRGYC--SRHLSLKGAGSATGLRSKD-------RIRRPMNAFMIFSKRHRAKVHQIH 92
E +R +C S LS GS + S + R+RRP+NAF+I++K R ++ Q++
Sbjct: 33 EQRRTAHCPASGPLSPVSVGSESSCSSPEAKAPVETRVRRPLNAFIIWTKEERRRLAQLN 92
Query: 93 PNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSG 152
P+ +N +SKILG+ W ++ +K+ Y + A ++ H +P +K+ + +RK + S
Sbjct: 93 PDLENTDLSKILGKTWKAMSLADKRPYMQEAERLRIQHTIDYPNYKYRPR-RRKCNKRSS 151
Query: 153 RGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSNETTVQYLLHPTGRLSNIYSTGFQIPI 212
K+ S E DL + N+ L H N +S+ +
Sbjct: 152 --KMPS-SENVSSPNATFDLSYMFQGQAPQRPYNQINSYRLPHNGFSFEN-HSSSYHFEA 207
Query: 213 SSESLGNV 220
+S S GNV
Sbjct: 208 TSSS-GNV 214
>UNIPROTKB|F1MUJ1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:DAAA02059239 EMBL:DAAA02059240
EMBL:DAAA02059241 EMBL:DAAA02059242 EMBL:DAAA02059243
IPI:IPI01028215 Ensembl:ENSBTAT00000028748 Uniprot:F1MUJ1
Length = 338
Score = 158 (60.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 32/92 (34%), Positives = 54/92 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+ K I++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA
Sbjct: 218 KKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELAR 277
Query: 125 EVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
+ ++ H + +P W + K KRK G
Sbjct: 278 KERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 309
>UNIPROTKB|J9P2V1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AAEX03015533 EMBL:AAEX03015534
EMBL:AAEX03015535 Ensembl:ENSCAFT00000046482 Uniprot:J9P2V1
Length = 487
Score = 161 (61.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 168 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 227
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 228 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 283
>UNIPROTKB|E2QXK1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:EPWCLES EMBL:AAEX03015533
EMBL:AAEX03015534 EMBL:AAEX03015535 Ensembl:ENSCAFT00000017510
Uniprot:E2QXK1
Length = 507
Score = 161 (61.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 206 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 265
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 266 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 321
>ZFIN|ZDB-GENE-991110-8 [details] [associations]
symbol:tcf7l2 "transcription factor 7-like 2 (T-cell
specific, HMG-box)" species:7955 "Danio rerio" [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IBA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IMP;IBA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0022008 "neurogenesis" evidence=IBA] [GO:0008013 "beta-catenin
binding" evidence=IBA] [GO:0007420 "brain development"
evidence=IBA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IBA] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0003682
"chromatin binding" evidence=IBA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IBA] [GO:0048699
"generation of neurons" evidence=IBA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IBA]
[GO:0044333 "Wnt receptor signaling pathway involved in digestive
tract morphogenesis" evidence=IMP] [GO:0060729 "intestinal
epithelial structure maintenance" evidence=IMP] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 ZFIN:ZDB-GENE-991110-8
GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0008013
GO:GO:0060070 GO:GO:0048699 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 GO:GO:0060729
EMBL:AF507958 IPI:IPI00499161 UniGene:Dr.67692
ProteinModelPortal:Q71G52 SMR:Q71G52 STRING:Q71G52
InParanoid:Q71G52 ArrayExpress:Q71G52 GO:GO:0044333 Uniprot:Q71G52
Length = 610
Score = 162 (62.1 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 32/94 (34%), Positives = 56/94 (59%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+ + I++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA
Sbjct: 328 KKQPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELAR 387
Query: 125 EVKEAHFKAHPEWK----WCSKDKRKSSTGSGRG 154
+ ++ H + +P W + K KRK +G G
Sbjct: 388 KERQLHMQLYPGWSARDNYGKKKKRKREKQAGEG 421
>UNIPROTKB|F1PHT3 [details] [associations]
symbol:SOX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0048546 "digestive tract
morphogenesis" evidence=IEA] [GO:0048484 "enteric nervous system
development" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0031315
"extrinsic to mitochondrial outer membrane" evidence=IEA]
[GO:0030318 "melanocyte differentiation" evidence=IEA] [GO:0014015
"positive regulation of gliogenesis" evidence=IEA] [GO:0007422
"peripheral nervous system development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0003682 GO:GO:0003705
GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589 GO:GO:0090090
GO:GO:0030318 GO:GO:0048709 GO:GO:0031315 GO:GO:0048484
GO:GO:0002052 GO:GO:0048546 GO:GO:0048469 GO:GO:0014015 CTD:6663
GeneTree:ENSGT00670000097649 KO:K09270 InterPro:IPR022151
Pfam:PF12444 OMA:YYGHSSQ EMBL:AAEX03007323 RefSeq:XP_538379.3
Ensembl:ENSCAFT00000002231 GeneID:481258 KEGG:cfa:481258
Uniprot:F1PHT3
Length = 468
Score = 157 (60.3 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 30/100 (30%), Positives = 56/100 (56%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 101 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 160
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEG 162
++ H K HP++K+ + ++ G + G ++G
Sbjct: 161 RLRMQHKKDHPDYKYQPRRRKNGKAAQGESECPGGEAEQG 200
Score = 43 (20.2 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 317 SEPPGGGQENKGTGPQTSHFK 337
SE PGG E G +H+K
Sbjct: 190 SECPGGEAEQGGAAAIQAHYK 210
>UNIPROTKB|F1N6W0 [details] [associations]
symbol:SOX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0048484 "enteric nervous system development"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031315 "extrinsic to
mitochondrial outer membrane" evidence=IEA] [GO:0030318 "melanocyte
differentiation" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000980 "RNA polymerase II
distal enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0043066 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0048709 GO:GO:0031315
GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
GO:GO:0014015 CTD:6663 GeneTree:ENSGT00670000097649 KO:K09270
InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ EMBL:DAAA02014653
EMBL:DAAA02014645 EMBL:DAAA02014646 EMBL:DAAA02014647
EMBL:DAAA02014648 EMBL:DAAA02014649 EMBL:DAAA02014650
EMBL:DAAA02014651 EMBL:DAAA02014652 IPI:IPI00718217
RefSeq:NP_001180176.1 UniGene:Bt.22876 Ensembl:ENSBTAT00000034677
GeneID:353115 KEGG:bta:353115 NextBio:20812699 Uniprot:F1N6W0
Length = 469
Score = 157 (60.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 30/100 (30%), Positives = 56/100 (56%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 102 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 161
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEG 162
++ H K HP++K+ + ++ G + G ++G
Sbjct: 162 RLRMQHKKDHPDYKYQPRRRKNGKAAQGESECPGGEAEQG 201
Score = 43 (20.2 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 317 SEPPGGGQENKGTGPQTSHFK 337
SE PGG E G +H+K
Sbjct: 191 SECPGGEAEQGGAAAIQAHYK 211
>UNIPROTKB|A5A763 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:6663 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 OrthoDB:EOG41C6WH InterPro:IPR022151
Pfam:PF12444 EMBL:AB271933 RefSeq:NP_001093403.1 UniGene:Ssc.27602
ProteinModelPortal:A5A763 SMR:A5A763 STRING:A5A763 GeneID:414903
KEGG:ssc:414903 Uniprot:A5A763
Length = 469
Score = 157 (60.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 30/100 (30%), Positives = 56/100 (56%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 102 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 161
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEG 162
++ H K HP++K+ + ++ G + G ++G
Sbjct: 162 RLRMQHKKDHPDYKYQPRRRKNGKAAQGESECPGGEAEQG 201
Score = 43 (20.2 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 317 SEPPGGGQENKGTGPQTSHFK 337
SE PGG E G +H+K
Sbjct: 191 SECPGGEAEQGGAAAIQAHYK 211
>UNIPROTKB|F1S5J6 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070369 "beta-catenin-TCF7L2
complex" evidence=IEA] [GO:0070016 "armadillo repeat domain
binding" evidence=IEA] [GO:0061178 "regulation of insulin secretion
involved in cellular response to glucose stimulus" evidence=IEA]
[GO:0060325 "face morphogenesis" evidence=IEA] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048713 "regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0048660
"regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0048641 "regulation of skeletal muscle tissue development"
evidence=IEA] [GO:0048625 "myoblast cell fate commitment"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=IEA] [GO:0046621 "negative regulation of
organ growth" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045599 "negative regulation of fat cell differentiation"
evidence=IEA] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0045295 "gamma-catenin binding" evidence=IEA] [GO:0044334
"canonical Wnt receptor signaling pathway involved in positive
regulation of epithelial to mesenchymal transition" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0040037 "negative regulation of fibroblast growth factor
receptor signaling pathway" evidence=IEA] [GO:0035411 "catenin
import into nucleus" evidence=IEA] [GO:0035257 "nuclear hormone
receptor binding" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0032350 "regulation of hormone metabolic process"
evidence=IEA] [GO:0032252 "secretory granule localization"
evidence=IEA] [GO:0032092 "positive regulation of protein binding"
evidence=IEA] [GO:0032024 "positive regulation of insulin
secretion" evidence=IEA] [GO:0031641 "regulation of myelination"
evidence=IEA] [GO:0030538 "embryonic genitalia morphogenesis"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0010909 "positive
regulation of heparan sulfate proteoglycan biosynthetic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0007050 "cell
cycle arrest" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0046827 GO:GO:0043588
GO:GO:0032092 GO:GO:0008283 GO:GO:0043565 GO:GO:0045944
GO:GO:0032024 GO:GO:0003700 GO:GO:0007050 GO:GO:0003682
GO:GO:0042593 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0043065 GO:GO:0048641 GO:GO:0051897 GO:GO:0045599
GO:GO:0042475 GO:GO:0043433 GO:GO:0090090 GO:GO:0035019
GO:GO:0001568 GO:GO:0045444 GO:GO:0021915 GO:GO:0021983
GO:GO:0030282 GO:GO:0048660 GO:GO:0035411 GO:GO:0060325
GO:GO:0046621 GO:GO:0014003 GO:GO:0043570 GO:GO:0050679
GO:GO:0032993 GO:GO:0030514 GO:GO:0048619 GO:GO:0061178
GO:GO:0031641 GO:GO:0040037 GO:GO:0070369 GO:GO:0044334
GO:GO:0010909 GO:GO:0048713 GO:GO:0048625 GO:GO:0048557
GO:GO:0030538 GO:GO:0032350 GO:GO:0032252 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
OMA:EPWCLES EMBL:CT737264 EMBL:CT737332 EMBL:CT826377
Ensembl:ENSSSCT00000011635 Uniprot:F1S5J6
Length = 468
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H + + K I++P+NAFM++ K RAKV +++ +
Sbjct: 168 QESSQSDVSSLHSAKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 227
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 228 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 283
>UNIPROTKB|F1NNF2 [details] [associations]
symbol:SOX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060164 "regulation of timing of neuron differentiation"
evidence=IEA] [GO:0061036 "positive regulation of cartilage
development" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:2000741
"positive regulation of mesenchymal stem cell differentiation"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0045892 GO:GO:0071560 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0032332 GO:GO:0045165 GO:GO:0061036
GeneTree:ENSGT00690000101789 OMA:PSEHSSM GO:GO:2000741
EMBL:AADN02006625 EMBL:AADN02006626 EMBL:AADN02006627
EMBL:AADN02006628 EMBL:AADN02006629 IPI:IPI00574856
Ensembl:ENSGALT00000037410 ArrayExpress:F1NNF2 Uniprot:F1NNF2
Length = 762
Score = 163 (62.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 57/238 (23%), Positives = 106/238 (44%)
Query: 37 DGCSKESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQD 96
DG + S+ R Y +G GS ++ I+RPMNAFM+++K R K+ Q P+
Sbjct: 530 DGSAGVSESRIYRES----RGRGS-----NEPHIKRPMNAFMVWAKDERRKILQAFPDMH 580
Query: 97 NRTVSKIL-GEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGK 155
N +SKIL G W ++ EKQ Y+E + + + H + +P++K+ + KR + +
Sbjct: 581 NSNISKILAGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLR 640
Query: 156 LGSMDEGTGEGFMPDDLEHFENSLEMVTSSN-ETTVQYLLHPTGRLSNIYSTGFQIPISS 214
+G + M + + + + +++P G ++ +P
Sbjct: 641 IGEY-----KAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYP-GAIAMAGMPSPHLPSEH 694
Query: 215 ESLGNVKQPTTPTV-----IVSKQSNI--EMQNASVAAANAELMQQADKNKDSEQQKY 265
S+ + +P P + I ++ +I EMQ V N E+ + D+ +D Y
Sbjct: 695 SSVSSSPEPGMPVIQSTYGIKGEEPHIKEEMQTDDV---NGEIYDEYDEEEDDPDVDY 749
>UNIPROTKB|G3MX34 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070369 "beta-catenin-TCF7L2
complex" evidence=IEA] [GO:0070016 "armadillo repeat domain
binding" evidence=IEA] [GO:0061178 "regulation of insulin secretion
involved in cellular response to glucose stimulus" evidence=IEA]
[GO:0060325 "face morphogenesis" evidence=IEA] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048713 "regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0048660
"regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0048641 "regulation of skeletal muscle tissue development"
evidence=IEA] [GO:0048625 "myoblast cell fate commitment"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=IEA] [GO:0046621 "negative regulation of
organ growth" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045599 "negative regulation of fat cell differentiation"
evidence=IEA] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0045295 "gamma-catenin binding" evidence=IEA] [GO:0044334
"canonical Wnt receptor signaling pathway involved in positive
regulation of epithelial to mesenchymal transition" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0040037 "negative regulation of fibroblast growth factor
receptor signaling pathway" evidence=IEA] [GO:0035411 "catenin
import into nucleus" evidence=IEA] [GO:0035257 "nuclear hormone
receptor binding" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0032350 "regulation of hormone metabolic process"
evidence=IEA] [GO:0032252 "secretory granule localization"
evidence=IEA] [GO:0032092 "positive regulation of protein binding"
evidence=IEA] [GO:0032024 "positive regulation of insulin
secretion" evidence=IEA] [GO:0031641 "regulation of myelination"
evidence=IEA] [GO:0030538 "embryonic genitalia morphogenesis"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0010909 "positive
regulation of heparan sulfate proteoglycan biosynthetic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0007050 "cell
cycle arrest" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0046827 GO:GO:0043588
GO:GO:0032092 GO:GO:0008283 GO:GO:0043565 GO:GO:0045944
GO:GO:0032024 GO:GO:0003700 GO:GO:0007050 GO:GO:0003682
GO:GO:0042593 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0043065 GO:GO:0048641 GO:GO:0051897 GO:GO:0045599
GO:GO:0042475 GO:GO:0043433 GO:GO:0090090 GO:GO:0035019
GO:GO:0001568 GO:GO:0045444 GO:GO:0021915 GO:GO:0021983
GO:GO:0030282 GO:GO:0048660 GO:GO:0035411 GO:GO:0060325
GO:GO:0046621 GO:GO:0014003 GO:GO:0043570 GO:GO:0050679
GO:GO:0032993 GO:GO:0030514 GO:GO:0048619 GO:GO:0061178
GO:GO:0031641 GO:GO:0040037 GO:GO:0070369 GO:GO:0044334
GO:GO:0010909 GO:GO:0048713 GO:GO:0048625 GO:GO:0048557
GO:GO:0030538 GO:GO:0032350 GO:GO:0032252 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
EMBL:DAAA02059239 EMBL:DAAA02059240 EMBL:DAAA02059241
EMBL:DAAA02059242 EMBL:DAAA02059243 Ensembl:ENSBTAT00000065150
OMA:PRDTILV Uniprot:G3MX34
Length = 371
Score = 158 (60.7 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 32/92 (34%), Positives = 54/92 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+ K I++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA
Sbjct: 251 KKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELAR 310
Query: 125 EVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
+ ++ H + +P W + K KRK G
Sbjct: 311 KERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 342
>UNIPROTKB|E2RRW8 [details] [associations]
symbol:TCF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:QDDKSRD EMBL:AAEX03007782
Ensembl:ENSCAFT00000001527 Uniprot:E2RRW8
Length = 418
Score = 159 (61.0 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 36/105 (34%), Positives = 62/105 (59%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K I++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 300 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 359
Query: 127 KEAHFKAHPEW---------KWCSKDK-RKSSTGSGRGKLGSMDE 161
++ H + +P W K S++K ++S+TG R G+ E
Sbjct: 360 RQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPE 404
>UNIPROTKB|O42601 [details] [associations]
symbol:sox17b.1 "Transcription factor Sox-17-beta.1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007494 "midgut development"
evidence=IMP] [GO:0008013 "beta-catenin binding" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0007494
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0008013 GO:GO:0007492 GO:GO:0030178
GO:GO:0007369 HSSP:P48431 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 EMBL:AJ001742 EMBL:BC070615 RefSeq:NP_001081633.1
UniGene:Xl.44 ProteinModelPortal:O42601 SMR:O42601 GeneID:397967
KEGG:xla:397967 CTD:397967 Xenbase:XB-GENE-6252148 Uniprot:O42601
Length = 373
Score = 158 (60.7 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 50/154 (32%), Positives = 78/154 (50%)
Query: 59 GSATGLRSK--DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
GSA RSK RIRRPMNAFM+++K R ++ Q +P+ N +SK+LG+ W SL K
Sbjct: 46 GSADS-RSKAEGRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLATK 104
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKR--KSSTGSGRGKLGSMDEGTGEGFMPDDLEH 174
+ + E A ++ H + +P++K+ + K+ K G L S + G M +++
Sbjct: 105 RPFVEEAERLRVQHIQDYPDYKYRPRRKKQVKRMKREEDGFLPSANF-PGSQIMDNNVMV 163
Query: 175 FENSLEMVTSSNETTVQYLLHPTGRLSNIYSTGF 208
EN ++ N Q L P G S G+
Sbjct: 164 GENYRMQYSAQNHQQNQ--LPPAGYFEGHNSMGY 195
>UNIPROTKB|A5PK15 [details] [associations]
symbol:TCF7 "TCF7 protein" species:9913 "Bos taurus"
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HOGENOM:HOG000116032 HOVERGEN:HBG000419 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
GeneTree:ENSGT00390000009964 CTD:6932 KO:K02620 EMBL:DAAA02020329
EMBL:DAAA02020330 EMBL:DAAA02020331 EMBL:DAAA02020332
EMBL:DAAA02020333 EMBL:BC142317 IPI:IPI00854470
RefSeq:NP_001092656.1 UniGene:Bt.44634 SMR:A5PK15 STRING:A5PK15
Ensembl:ENSBTAT00000001327 GeneID:782690 KEGG:bta:782690
NextBio:20925627 Uniprot:A5PK15
Length = 388
Score = 158 (60.7 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 38/121 (31%), Positives = 66/121 (54%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 254 RSLKAQADSKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 313
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEW---------KWCSKDK-RKSSTGSGRGKLGSMD 160
L EE+ KY+ELA + ++ H + +P W K S++K ++S++G R G+
Sbjct: 314 LSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESNSGGKRNAFGTYP 373
Query: 161 E 161
E
Sbjct: 374 E 374
>UNIPROTKB|E2R800 [details] [associations]
symbol:SOX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060324 "face development" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048515
"spermatid differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0007530 "sex determination" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0007423 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 GeneTree:ENSGT00690000101940
GO:GO:0007530 KO:K09267 InterPro:IPR022097 Pfam:PF12336 CTD:6658
OMA:AQSYMNV EMBL:AAEX03026974 RefSeq:XP_852934.1
Ensembl:ENSCAFT00000030220 GeneID:492178 KEGG:cfa:492178
NextBio:20864806 Uniprot:E2R800
Length = 444
Score = 159 (61.0 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 32/93 (34%), Positives = 54/93 (58%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G+ G +DR++RPMNAFM++S+ R K+ +P N +SK LG W L EK
Sbjct: 126 GSSGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEK 185
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSST 149
+ + + A ++ H K +P++K+ + +RK+ T
Sbjct: 186 RPFIDEAKRLRAVHMKEYPDYKY--RPRRKTKT 216
>UNIPROTKB|Q9NQB0 [details] [associations]
symbol:TCF7L2 "Transcription factor 7-like 2" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0030282
"bone mineralization" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=IEA] [GO:0032252 "secretory
granule localization" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0035411 "catenin import into
nucleus" evidence=IEA] [GO:0040037 "negative regulation of
fibroblast growth factor receptor signaling pathway" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0045599 "negative regulation of fat cell differentiation"
evidence=IEA] [GO:0046621 "negative regulation of organ growth"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0048713 "regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0061178 "regulation of insulin secretion involved in cellular
response to glucose stimulus" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0003682 "chromatin binding" evidence=IBA] [GO:0005667
"transcription factor complex" evidence=IBA] [GO:0007420 "brain
development" evidence=IBA] [GO:0022008 "neurogenesis" evidence=IBA]
[GO:0048699 "generation of neurons" evidence=IBA] [GO:0005515
"protein binding" evidence=IPI] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA;IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0031016 "pancreas development" evidence=TAS] [GO:0007050 "cell
cycle arrest" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0045444 "fat cell differentiation" evidence=IDA]
[GO:0048625 "myoblast cell fate commitment" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008013 "beta-catenin
binding" evidence=IDA;IPI] [GO:0032350 "regulation of hormone
metabolic process" evidence=IDA] [GO:0042593 "glucose homeostasis"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IC] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP;IDA] [GO:0001568 "blood vessel
development" evidence=IMP] [GO:0032993 "protein-DNA complex"
evidence=IDA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IPI] [GO:0032092 "positive regulation of protein
binding" evidence=IDA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0044334
"canonical Wnt receptor signaling pathway involved in positive
regulation of epithelial to mesenchymal transition" evidence=IMP]
[GO:0043570 "maintenance of DNA repeat elements" evidence=IMP]
[GO:0048660 "regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0070369 "beta-catenin-TCF7L2 complex"
evidence=IDA] [GO:0045295 "gamma-catenin binding" evidence=IPI]
[GO:0010909 "positive regulation of heparan sulfate proteoglycan
biosynthetic process" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0009749 "response to glucose stimulus"
evidence=ISS] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=IMP] [GO:0046827 "positive regulation
of protein export from nucleus" evidence=IMP] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 InterPro:IPR024940
Pfam:PF00505 GO:GO:0043066 GO:GO:0046827 GO:GO:0043588
GO:GO:0007420 GO:GO:0032092 GO:GO:0016605 GO:GO:0008283
GO:GO:0009749 GO:GO:0045944 GO:GO:0032024 GO:GO:0003700
GO:GO:0007050 GO:GO:0006351 GO:GO:0003682 GO:GO:0042593
GO:GO:0005667 GO:GO:0000978 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0043065
GO:GO:0000790 GO:GO:0048641 GO:GO:0051897 GO:GO:0045599 MIM:125853
GO:GO:0042475 GO:GO:0043433 GO:GO:0090090 GO:GO:0035019
GO:GO:0001568 GO:GO:0045444 GO:GO:0021915 GO:GO:0031016
GO:GO:0021983 GO:GO:0030282 GO:GO:0008013 GO:GO:0048660
GO:GO:0035411 GO:GO:0060325 GO:GO:0046621 GO:GO:0014003
GO:GO:0043570 GO:GO:0050679 PDB:2GL7 PDBsum:2GL7 GO:GO:0032993
GO:GO:0030514 GO:GO:0048619 GO:GO:0061178 GO:GO:0031641
GO:GO:0048699 GO:GO:0040037 GO:GO:0070369 GO:GO:0044334
GO:GO:0010909 PDB:1JDH PDB:1JPW PDBsum:1JDH PDBsum:1JPW
GO:GO:0048713 GO:GO:0048625 GO:GO:0048557 GO:GO:0030538
GO:GO:0032350 GO:GO:0032252 CleanEx:HS_TCF4 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
EMBL:Y11306 EMBL:AJ270770 EMBL:AJ270771 EMBL:AJ270772 EMBL:AJ270773
EMBL:AJ270774 EMBL:AJ270775 EMBL:AJ270776 EMBL:AJ270778
EMBL:AJ270777 EMBL:AL135792 EMBL:AL158212 EMBL:AL445486
EMBL:AL451084 EMBL:BC032656 EMBL:AB034691 IPI:IPI00164708
IPI:IPI00221004 IPI:IPI00221005 IPI:IPI00221006 IPI:IPI00221007
IPI:IPI00221008 IPI:IPI00221009 IPI:IPI00221010 IPI:IPI00221011
IPI:IPI00335587 IPI:IPI00479483 IPI:IPI00983769 PIR:S22807
RefSeq:NP_001139746.1 RefSeq:NP_001139756.1 UniGene:Hs.593995
DisProt:DP00175 ProteinModelPortal:Q9NQB0 SMR:Q9NQB0 DIP:DIP-36236N
IntAct:Q9NQB0 MINT:MINT-222146 STRING:Q9NQB0 PhosphoSite:Q9NQB0
DMDM:29337146 PaxDb:Q9NQB0 PRIDE:Q9NQB0 Ensembl:ENST00000352065
Ensembl:ENST00000355717 Ensembl:ENST00000355995
Ensembl:ENST00000369397 Ensembl:ENST00000534894
Ensembl:ENST00000536810 Ensembl:ENST00000538897
Ensembl:ENST00000543371 Ensembl:ENST00000545257 GeneID:6934
KEGG:hsa:6934 UCSC:uc001lad.4 UCSC:uc001lae.4 UCSC:uc021pyi.1
UCSC:uc021pyj.1 CTD:6934 GeneCards:GC10P114700 HGNC:HGNC:11641
HPA:CAB013535 MIM:602228 neXtProt:NX_Q9NQB0 PharmGKB:PA36394
KO:K04491 OMA:EPWCLES OrthoDB:EOG43XV3J ChEMBL:CHEMBL1914264
ChiTaRS:TCF7L2 EvolutionaryTrace:Q9NQB0 GenomeRNAi:6934
NextBio:27133 ArrayExpress:Q9NQB0 Bgee:Q9NQB0 Genevestigator:Q9NQB0
GermOnline:ENSG00000148737 Uniprot:Q9NQB0
Length = 619
Score = 161 (61.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 41 KESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTV 100
+ES + S H S + K I++P+NAFM++ K RAKV +++ +
Sbjct: 321 QESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI 380
Query: 101 SKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRKSSTGSG 152
++ILG W++L EE+ KY+ELA + ++ H + +P W + K KRK G
Sbjct: 381 NQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPG 436
>RGD|3735 [details] [associations]
symbol:Sox10 "SRY (sex determining region Y)-box 10" species:10116
"Rattus norvegicus" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0001755 "neural crest cell migration" evidence=IEA;ISO]
[GO:0002052 "positive regulation of neuroblast proliferation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007422 "peripheral nervous system
development" evidence=IEA;ISO] [GO:0008134 "transcription factor
binding" evidence=IDA;IPI] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030318 "melanocyte differentiation"
evidence=IEA;ISO] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0048468 "cell development"
evidence=NAS] [GO:0048469 "cell maturation" evidence=IEA;ISO]
[GO:0048484 "enteric nervous system development" evidence=IEA;ISO]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA;ISO]
[GO:0048589 "developmental growth" evidence=IEA;ISO] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA;ISO] [GO:0048863 "stem
cell differentiation" evidence=IEP] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
InterPro:IPR009071 Pfam:PF00505 RGD:3735 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0043066 GO:GO:0003677 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0048863 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0008134 GO:GO:0030318 GO:GO:0048709 GO:GO:0048468
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
GO:GO:0014015 CTD:6663 eggNOG:NOG295709 GeneTree:ENSGT00670000097649
HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270 OrthoDB:EOG41C6WH
InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ EMBL:AJ001029
EMBL:BC062067 IPI:IPI00195985 RefSeq:NP_062066.1 UniGene:Rn.10883
ProteinModelPortal:O55170 SMR:O55170 IntAct:O55170 MINT:MINT-3376332
STRING:O55170 Ensembl:ENSRNOT00000015283 GeneID:29361 KEGG:rno:29361
UCSC:RGD:3735 InParanoid:O55170 NextBio:608888 Genevestigator:O55170
GermOnline:ENSRNOG00000011305 Uniprot:O55170
Length = 466
Score = 161 (61.7 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 99 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 158
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEG 162
++ H K HP++K+ + ++ G + G D+G
Sbjct: 159 RLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGETDQG 198
Score = 37 (18.1 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 317 SEPPGGGQENKGTGPQTSHFK 337
+E PGG + G +H+K
Sbjct: 188 AECPGGETDQGGAAAIQAHYK 208
>UNIPROTKB|A7MAZ8 [details] [associations]
symbol:TCF7 "TCF7 protein" species:9913 "Bos taurus"
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IBA] [GO:0048699 "generation of neurons" evidence=IBA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
evidence=IBA] [GO:0022008 "neurogenesis" evidence=IBA] [GO:0016055
"Wnt receptor signaling pathway" evidence=IBA] [GO:0008013
"beta-catenin binding" evidence=IBA] [GO:0007420 "brain
development" evidence=IBA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IBA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IBA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IBA] [GO:0003682 "chromatin binding"
evidence=IBA] [GO:0071353 "cellular response to interleukin-4"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0046632 "alpha-beta T cell differentiation"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0033153 "T cell receptor V(D)J recombination"
evidence=IEA] [GO:0030538 "embryonic genitalia morphogenesis"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0007420
GO:GO:0042981 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0003682 GO:GO:0005667 GO:GO:0042127 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0021915 GO:GO:0008013 GO:GO:0046632 GO:GO:0060070
GO:GO:0033153 GO:GO:0048619 GO:GO:0048699 GO:GO:0071353
GO:GO:0048557 GO:GO:0030538 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OrthoDB:EOG4ZGPCV EMBL:DAAA02020329
EMBL:DAAA02020330 EMBL:DAAA02020331 EMBL:DAAA02020332
EMBL:DAAA02020333 UniGene:Bt.44634 EMBL:BC151260 IPI:IPI00685438
SMR:A7MAZ8 STRING:A7MAZ8 Ensembl:ENSBTAT00000001329
InParanoid:A7MAZ8 OMA:QDDKSRD Uniprot:A7MAZ8
Length = 419
Score = 158 (60.7 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 38/121 (31%), Positives = 66/121 (54%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 285 RSLKAQADSKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 344
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEW---------KWCSKDK-RKSSTGSGRGKLGSMD 160
L EE+ KY+ELA + ++ H + +P W K S++K ++S++G R G+
Sbjct: 345 LSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESNSGGKRNAFGTYP 404
Query: 161 E 161
E
Sbjct: 405 E 405
>UNIPROTKB|Q6DFF5 [details] [associations]
symbol:sox9-b "Transcription factor Sox-9-B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0014029 "neural crest formation"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0043049 "otic placode formation" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0006351 GO:GO:0019899 GO:GO:0007506 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0051216
GO:GO:0043049 GO:GO:0014029 KO:K09270 InterPro:IPR022151
Pfam:PF12444 HSSP:P48432 EMBL:AB439583 EMBL:BC076783
RefSeq:NP_001087942.1 UniGene:Xl.28992 ProteinModelPortal:Q6DFF5
SMR:Q6DFF5 GeneID:494585 KEGG:xla:494585 CTD:494585
Xenbase:XB-GENE-1034775 Uniprot:Q6DFF5
Length = 476
Score = 156 (60.0 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQSEQDDSAEQT 196
Score = 43 (20.2 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 171 DLEHFENSLEMVT------SSNETTVQYLLHPTGRLSNIYS 205
+L+H+ +S +T + ++ + Y H +G+ S +YS
Sbjct: 391 NLQHYSSSYPTITRAQYDYTEHQGSNSYYTHASGQNSGLYS 431
>UNIPROTKB|B7WNT5 [details] [associations]
symbol:TCF7 "Transcription factor 7" species:9606 "Homo
sapiens" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
EMBL:CH471062 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 IPI:IPI00219960
UniGene:Hs.573153 HGNC:HGNC:11639 ChiTaRS:TCF7 EMBL:AC008608
EMBL:AC011336 SMR:B7WNT5 STRING:B7WNT5 Ensembl:ENST00000395029
Uniprot:B7WNT5
Length = 481
Score = 159 (61.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYS 110
R+L + A K I++P+NAFM++ K RAKV +++ +++ILG W++
Sbjct: 250 RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHA 309
Query: 111 LGPEEKQKYHELASEVKEAHFKAHPEWKW---CSKDKRKS 147
L EE+ KY+ELA + ++ H + +P W K KR+S
Sbjct: 310 LSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRS 349
>ZFIN|ZDB-GENE-050522-414 [details] [associations]
symbol:hbp1 "HMG-box transcription factor 1"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR013723 Pfam:PF08517 PROSITE:PS51148
Pfam:PF00505 ZFIN:ZDB-GENE-050522-414 GO:GO:0003723
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
SUPFAM:SSF102031 eggNOG:NOG149693 HOGENOM:HOG000065753
HOVERGEN:HBG052810 CTD:26959 OrthoDB:EOG4KKZ36 EMBL:BC095740
IPI:IPI00481952 RefSeq:NP_001019602.2 UniGene:Dr.27055
ProteinModelPortal:Q502D8 SMR:Q502D8 STRING:Q502D8 GeneID:554137
KEGG:dre:554137 InParanoid:Q502D8 NextBio:20880696 Uniprot:Q502D8
Length = 481
Score = 159 (61.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 50 SRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWY 109
S+ G+ AT + K RPMNAFM+F+K++R + Q++P +DNR +S ILG+ W
Sbjct: 385 SQRSHASGSSGATPTKCK----RPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDKWK 440
Query: 110 SLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSS 148
+ EE++ Y A + E + +P+ C K KR +S
Sbjct: 441 KMKNEERRMYTMEAKALAEEQKRLNPD---CWKRKRTNS 476
>UNIPROTKB|F5H3H1 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
PANTHER:PTHR10270:SF48 HGNC:HGNC:11311 EMBL:AC006040
IPI:IPI01013243 ProteinModelPortal:F5H3H1 SMR:F5H3H1
Ensembl:ENST00000534739 ArrayExpress:F5H3H1 Bgee:F5H3H1
Uniprot:F5H3H1
Length = 165
Score = 137 (53.3 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 62 TGLRSK----DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
TG SK DR++RPMNAF+++S+ R K+ +P N +SK LG W L EK
Sbjct: 48 TGENSKGNVQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKW 107
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRK 146
+ + A +++ H + +P +K+ + K K
Sbjct: 108 PFFQEAQKLQAMHREKYPNYKYRPRRKAK 136
>UNIPROTKB|F1M1R9 [details] [associations]
symbol:LOC100361823 "Protein LOC100361823" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046022 "positive regulation of transcription from RNA
polymerase II promoter during mitosis" evidence=IEA] [GO:0048319
"axial mesoderm morphogenesis" evidence=IEA] [GO:2000036
"regulation of stem cell maintenance" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 RGD:2319352
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 IPI:IPI00768045
Ensembl:ENSRNOT00000020005 ArrayExpress:F1M1R9 Uniprot:F1M1R9
Length = 442
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 197 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 256
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSN 186
++ H + +P W ++D G+ K ++ + ++ E +L V+ S
Sbjct: 257 RQLHAQLYPTWS--ARDNY------GKKKKRKREKQLSQTQSQQQIQEAEGAL--VSKSK 306
Query: 187 ETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQS 234
+ +QYL S S G + + + P P S+Q+
Sbjct: 307 KPCIQYLPPEKPCDSPASSHGSTLDSPATPSAALASPAAPAATHSEQA 354
>UNIPROTKB|O18896 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9823 "Sus
scrofa" [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0002683 "negative regulation of immune system
process" evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0030916 "otic vesicle formation" evidence=ISS] [GO:0001708
"cell fate specification" evidence=ISS] [GO:2000741 "positive
regulation of mesenchymal stem cell differentiation" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0010564 "regulation of cell cycle process"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006334 "nucleosome assembly" evidence=ISS]
[GO:0071504 "cellular response to heparin" evidence=ISS]
[GO:0071364 "cellular response to epidermal growth factor stimulus"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=ISS] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=ISS] [GO:0070168 "negative
regulation of biomineral tissue development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0003170 "heart valve development" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISS] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0061138
"morphogenesis of a branching epithelium" evidence=ISS] [GO:0060784
"regulation of cell proliferation involved in tissue homeostasis"
evidence=ISS] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0090103
"cochlea morphogenesis" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0003415 "chondrocyte hypertrophy" evidence=ISS]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=ISS] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=ISS] [GO:0045662
"negative regulation of myoblast differentiation" evidence=ISS]
[GO:0042981 "regulation of apoptotic process" evidence=ISS]
[GO:0042127 "regulation of cell proliferation" evidence=ISS]
[GO:0035019 "somatic stem cell maintenance" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=ISS] [GO:0019100 "male germ-line sex
determination" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0003203 "endocardial cushion morphogenesis"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0035326 "enhancer
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0032332
"positive regulation of chondrocyte differentiation" evidence=ISS]
[GO:0001502 "cartilage condensation" evidence=ISS] [GO:0019933
"cAMP-mediated signaling" evidence=ISS] [GO:0008584 "male gonad
development" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=ISS] [GO:0001501
"skeletal system development" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0072034 "renal vesicle
induction" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:AF029696
RefSeq:NP_999008.1 UniGene:Ssc.16373 ProteinModelPortal:O18896
SMR:O18896 STRING:O18896 GeneID:396840 KEGG:ssc:396840
Uniprot:O18896
Length = 509
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGT 163
++ H K HP++K+ + +R+ S +G+ + E T
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQAEAEEATEQT 196
>ZFIN|ZDB-GENE-040109-4 [details] [associations]
symbol:sox7 "SRY-box containing gene 7" species:7955
"Danio rerio" [GO:0001570 "vasculogenesis" evidence=IGI]
[GO:0048793 "pronephros development" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-040109-4
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0001570 GO:GO:0048793 eggNOG:NOG242943 InterPro:IPR021934
Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270
HOGENOM:HOG000069999 HOVERGEN:HBG000517 CTD:83595 OrthoDB:EOG447FTC
OMA:SFECSAG EMBL:BX510941 EMBL:BC075872 EMBL:AY423014
IPI:IPI00504949 RefSeq:NP_001074219.1 UniGene:Dr.151971
UniGene:Dr.27174 SMR:Q6TEN5 STRING:Q6TEN5
Ensembl:ENSDART00000044224 Ensembl:ENSDART00000130271 GeneID:394203
KEGG:dre:394203 InParanoid:Q6TEN5 NextBio:20815136 Uniprot:Q6TEN5
Length = 390
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ RIRRPMNAFM+++K R ++ +P+ N +SK+LG+ W +L P +K+ Y E A
Sbjct: 39 SEPRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTPPQKRPYVEEAER 98
Query: 126 VKEAHFKAHPEWKWCSKDKRK 146
++ H + +P +K+ + K++
Sbjct: 99 LRVQHMQDYPNYKYRPRRKKQ 119
>UNIPROTKB|P48434 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IEP] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEP] [GO:0003170 "heart valve
development" evidence=IEP] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0071300
GO:GO:0006351 GO:GO:0008584 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001658 GO:GO:0003170
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
InterPro:IPR022151 Pfam:PF12444 OrthoDB:EOG4TXBRZ EMBL:U12533
IPI:IPI00589733 UniGene:Gga.890 ProteinModelPortal:P48434
SMR:P48434 STRING:P48434 InParanoid:P48434 Uniprot:P48434
Length = 494
Score = 156 (60.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 101 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAE 160
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGS 158
++ H K HP++K+ + ++ G + GS
Sbjct: 161 RLRVQHKKDHPDYKYQPRRRKTVKNGQSEQEEGS 194
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 166 GFMPDDLEHFENSLEMVTSS------NETTVQYLLHPTGRLSNIYST 206
G+ +L+H+ S +T S ++ + Y H G+ ++YST
Sbjct: 403 GYGSFNLQHYGFSYPPITRSEYDYTEHQNSGSYYSHAAGQSGSLYST 449
>MGI|MGI:96770 [details] [associations]
symbol:Lef1 "lymphoid enhancer binding factor 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001569 "patterning of blood vessels"
evidence=IMP] [GO:0001649 "osteoblast differentiation"
evidence=IBA] [GO:0001755 "neural crest cell migration"
evidence=IBA] [GO:0001756 "somitogenesis" evidence=IGI;IMP]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IMP]
[GO:0001944 "vasculature development" evidence=IMP] [GO:0002040
"sprouting angiogenesis" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO;IPI] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006917 "induction of apoptosis" evidence=IMP]
[GO:0008013 "beta-catenin binding" evidence=ISO;IBA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0010628 "positive regulation of
gene expression" evidence=ISO] [GO:0010718 "positive regulation of
epithelial to mesenchymal transition" evidence=ISO] [GO:0016055
"Wnt receptor signaling pathway" evidence=ISO;IGI;IMP;IDA]
[GO:0021542 "dentate gyrus development" evidence=IMP] [GO:0021766
"hippocampus development" evidence=IMP] [GO:0021854 "hypothalamus
development" evidence=IBA] [GO:0021861 "forebrain radial glial cell
differentiation" evidence=IGI] [GO:0021873 "forebrain neuroblast
division" evidence=IGI] [GO:0021879 "forebrain neuron
differentiation" evidence=IBA] [GO:0021943 "formation of radial
glial scaffolds" evidence=IGI] [GO:0022407 "regulation of cell-cell
adhesion" evidence=IMP] [GO:0022408 "negative regulation of
cell-cell adhesion" evidence=ISO] [GO:0022409 "positive regulation
of cell-cell adhesion" evidence=ISO] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IGI] [GO:0030223 "neutrophil
differentiation" evidence=ISO;IBA] [GO:0030284 "estrogen receptor
activity" evidence=ISO] [GO:0030307 "positive regulation of cell
growth" evidence=ISO] [GO:0030326 "embryonic limb morphogenesis"
evidence=IGI] [GO:0030331 "estrogen receptor binding"
evidence=ISO;IBA] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030509 "BMP signaling pathway"
evidence=IDA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IBA] [GO:0030854 "positive regulation
of granulocyte differentiation" evidence=ISO] [GO:0030879 "mammary
gland development" evidence=IMP] [GO:0032696 "negative regulation
of interleukin-13 production" evidence=ISO;IBA] [GO:0032713
"negative regulation of interleukin-4 production" evidence=ISO;IBA]
[GO:0032714 "negative regulation of interleukin-5 production"
evidence=ISO;IBA] [GO:0032993 "protein-DNA complex" evidence=ISO]
[GO:0033153 "T cell receptor V(D)J recombination" evidence=IGI]
[GO:0035326 "enhancer binding" evidence=ISO;IBA] [GO:0042100 "B
cell proliferation" evidence=IMP] [GO:0042393 "histone binding"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI;IMP] [GO:0043027 "cysteine-type endopeptidase
inhibitor activity involved in apoptotic process" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IBA] [GO:0043392 "negative regulation of DNA binding"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IBA] [GO:0043586 "tongue development" evidence=IMP]
[GO:0043923 "positive regulation by host of viral transcription"
evidence=ISO] [GO:0043966 "histone H3 acetylation" evidence=ISO]
[GO:0043967 "histone H4 acetylation" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IDA]
[GO:0045063 "T-helper 1 cell differentiation" evidence=IDA]
[GO:0045295 "gamma-catenin binding" evidence=ISO;IBA] [GO:0045843
"negative regulation of striated muscle tissue development"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO;IMP;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IGI;IMP;IDA] [GO:0046632 "alpha-beta T cell
differentiation" evidence=IGI] [GO:0048069 "eye pigmentation"
evidence=IBA] [GO:0048341 "paraxial mesoderm formation"
evidence=IGI] [GO:0048468 "cell development" evidence=IGI]
[GO:0048747 "muscle fiber development" evidence=IBA] [GO:0050909
"sensory perception of taste" evidence=IMP] [GO:0060021 "palate
development" evidence=IMP] [GO:0060033 "anatomical structure
regression" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO;IBA] [GO:0060325 "face
morphogenesis" evidence=IGI] [GO:0060326 "cell chemotaxis"
evidence=ISO] [GO:0060561 "apoptotic process involved in
morphogenesis" evidence=IMP] [GO:0060710 "chorio-allantoic fusion"
evidence=IGI] [GO:0061153 "trachea gland development" evidence=IMP]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO;IBA]
[GO:0070742 "C2H2 zinc finger domain binding" evidence=ISO]
[GO:0071345 "cellular response to cytokine stimulus" evidence=ISO]
[GO:0071353 "cellular response to interleukin-4" evidence=ISO]
[GO:0071864 "positive regulation of cell proliferation in bone
marrow" evidence=ISO;IBA] [GO:0071866 "negative regulation of
apoptotic process in bone marrow" evidence=ISO;IBA] [GO:0071895
"odontoblast differentiation" evidence=ISO;IBA] [GO:0071899
"negative regulation of estrogen receptor binding" evidence=ISO]
[GO:0090068 "positive regulation of cell cycle process"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] InterPro:IPR009071
InterPro:IPR024940 MGI:MGI:96770 Pfam:PF00505 GO:GO:0005737
GO:GO:0043154 GO:GO:0030307 GO:GO:0043588 GO:GO:0006917
GO:GO:0030111 GO:GO:0010226 GO:GO:0001755 GO:GO:0031100
GO:GO:0043565 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0003705 GO:GO:0045843 GO:GO:0000122 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0001756 GO:GO:0030326 GO:GO:0001822 GO:GO:0048747
GO:GO:0043967 GO:GO:0030509 GO:GO:0010718 GO:GO:0001569
GO:GO:0030335 GO:GO:0022407 GO:GO:0042475 GO:GO:0090090
GO:GO:0060326 GO:GO:0001649 GO:GO:0060021 GO:GO:0001837
GO:GO:0008013 GO:GO:0002040 GO:GO:0030331 GO:GO:0060325
GO:GO:0043027 GO:GO:0060070 GO:GO:0030520 GO:GO:0021879
GO:GO:0021873 GO:GO:0070016 GO:GO:0030879 GO:GO:0022408
GO:GO:0021854 GO:GO:0033153 GO:GO:0042100 GO:GO:0032993
GO:GO:0043966 GO:GO:0021542 GO:GO:0022409 GO:GO:0032713
GO:GO:0030854 GO:GO:0043392 GO:GO:0071353 GO:GO:0060561 PDB:3OUW
PDB:3OUX PDBsum:3OUW PDBsum:3OUX GO:GO:0060710 GO:GO:0071895
GO:GO:0050909 GO:GO:0061153 GO:GO:0043923 GO:GO:0043586
GO:GO:0030284 GO:GO:0032714 GO:GO:0045063 GO:GO:0021861
GO:GO:0048341 GO:GO:0048069 GO:GO:0032696 GO:GO:0030223 CTD:51176
eggNOG:NOG299161 HOGENOM:HOG000116032 HOVERGEN:HBG000419 KO:K04492
OMA:GYSGYIM OrthoDB:EOG480HWS ChiTaRS:LEF1 GO:GO:0035326
GO:GO:0060033 GO:GO:0021943 GO:GO:0071866 GO:GO:0071899
GO:GO:0090068 GO:GO:0071864 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 EMBL:X58636 EMBL:D16503 IPI:IPI00119934
IPI:IPI00230713 PIR:A39565 RefSeq:NP_034833.2 UniGene:Mm.255219
PDB:2LEF PDBsum:2LEF ProteinModelPortal:P27782 SMR:P27782
DIP:DIP-35132N IntAct:P27782 STRING:P27782 PhosphoSite:P27782
PRIDE:P27782 DNASU:16842 Ensembl:ENSMUST00000029611 GeneID:16842
KEGG:mmu:16842 InParanoid:P27782 EvolutionaryTrace:P27782
NextBio:290768 Bgee:P27782 CleanEx:MM_LEF1 Genevestigator:P27782
GermOnline:ENSMUSG00000027985 GO:GO:0045295 Uniprot:P27782
Length = 397
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 294 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 353
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 354 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESTSGTG 389
>RGD|620241 [details] [associations]
symbol:Lef1 "lymphoid enhancer binding factor 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=ISO] [GO:0001228 "RNA polymerase II
transcription regulatory region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0001569 "patterning of blood
vessels" evidence=ISO;IBA] [GO:0001649 "osteoblast differentiation"
evidence=ISO;IBA] [GO:0001755 "neural crest cell migration"
evidence=IBA] [GO:0001756 "somitogenesis" evidence=ISO;IBA]
[GO:0001822 "kidney development" evidence=IEP] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISO;IBA]
[GO:0001944 "vasculature development" evidence=ISO] [GO:0002040
"sprouting angiogenesis" evidence=ISO;IBA] [GO:0003677 "DNA
binding" evidence=ISO;ISS] [GO:0003682 "chromatin binding"
evidence=ISO;IBA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IBA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISO;IBA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO;IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IBA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IBA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006917 "induction of apoptosis" evidence=ISO;IBA] [GO:0007155
"cell adhesion" evidence=IEP] [GO:0007420 "brain development"
evidence=IBA] [GO:0008013 "beta-catenin binding" evidence=ISO;IBA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO;ISS]
[GO:0010226 "response to lithium ion" evidence=IEP] [GO:0010628
"positive regulation of gene expression" evidence=ISO] [GO:0010718
"positive regulation of epithelial to mesenchymal transition"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO;IBA] [GO:0016202 "regulation of striated muscle
tissue development" evidence=IBA] [GO:0021542 "dentate gyrus
development" evidence=ISO;IBA] [GO:0021766 "hippocampus
development" evidence=ISO] [GO:0021854 "hypothalamus development"
evidence=IBA] [GO:0021861 "forebrain radial glial cell
differentiation" evidence=ISO;IBA] [GO:0021873 "forebrain
neuroblast division" evidence=ISO;IBA] [GO:0021879 "forebrain
neuron differentiation" evidence=IBA] [GO:0021943 "formation of
radial glial scaffolds" evidence=ISO;IBA] [GO:0022008
"neurogenesis" evidence=IBA] [GO:0022407 "regulation of cell-cell
adhesion" evidence=ISO;IBA] [GO:0022408 "negative regulation of
cell-cell adhesion" evidence=ISO] [GO:0022409 "positive regulation
of cell-cell adhesion" evidence=ISO] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=ISO] [GO:0030223 "neutrophil
differentiation" evidence=ISO;IBA] [GO:0030284 "estrogen receptor
activity" evidence=ISO] [GO:0030307 "positive regulation of cell
growth" evidence=ISO] [GO:0030326 "embryonic limb morphogenesis"
evidence=ISO;IBA] [GO:0030331 "estrogen receptor binding"
evidence=ISO;IBA] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030509 "BMP signaling pathway"
evidence=ISO;IBA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IBA] [GO:0030854 "positive regulation
of granulocyte differentiation" evidence=ISO] [GO:0030879 "mammary
gland development" evidence=ISO;IBA] [GO:0031100 "organ
regeneration" evidence=IEP] [GO:0032696 "negative regulation of
interleukin-13 production" evidence=ISO;IBA] [GO:0032713 "negative
regulation of interleukin-4 production" evidence=ISO;IBA]
[GO:0032714 "negative regulation of interleukin-5 production"
evidence=ISO;IBA] [GO:0032993 "protein-DNA complex" evidence=ISO]
[GO:0033153 "T cell receptor V(D)J recombination" evidence=ISO]
[GO:0035326 "enhancer binding" evidence=ISO;IBA] [GO:0042100 "B
cell proliferation" evidence=ISO;IBA] [GO:0042393 "histone binding"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=ISO] [GO:0043027 "cysteine-type endopeptidase
inhibitor activity involved in apoptotic process" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IBA] [GO:0043392 "negative regulation of DNA binding"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IBA] [GO:0043586 "tongue development" evidence=ISO]
[GO:0043588 "skin development" evidence=IEP] [GO:0043923 "positive
regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0043967
"histone H4 acetylation" evidence=ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IBA] [GO:0045063
"T-helper 1 cell differentiation" evidence=ISO] [GO:0045295
"gamma-catenin binding" evidence=ISO;IBA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046632 "alpha-beta T cell differentiation" evidence=ISO;IBA]
[GO:0048069 "eye pigmentation" evidence=IBA] [GO:0048341 "paraxial
mesoderm formation" evidence=ISO;IBA] [GO:0048468 "cell
development" evidence=ISO] [GO:0048699 "generation of neurons"
evidence=IBA] [GO:0048747 "muscle fiber development" evidence=IBA]
[GO:0050909 "sensory perception of taste" evidence=ISO] [GO:0060021
"palate development" evidence=ISO] [GO:0060033 "anatomical
structure regression" evidence=ISO] [GO:0060070 "canonical Wnt
receptor signaling pathway" evidence=ISO;IBA] [GO:0060325 "face
morphogenesis" evidence=ISO;IBA] [GO:0060326 "cell chemotaxis"
evidence=ISO] [GO:0060561 "apoptotic process involved in
morphogenesis" evidence=ISO;IBA] [GO:0060710 "chorio-allantoic
fusion" evidence=ISO;IBA] [GO:0061153 "trachea gland development"
evidence=ISO;IBA] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO;IBA] [GO:0070742 "C2H2 zinc finger domain binding"
evidence=ISO] [GO:0071345 "cellular response to cytokine stimulus"
evidence=ISO] [GO:0071353 "cellular response to interleukin-4"
evidence=ISO] [GO:0071864 "positive regulation of cell
proliferation in bone marrow" evidence=ISO;IBA] [GO:0071866
"negative regulation of apoptotic process in bone marrow"
evidence=ISO;IBA] [GO:0071895 "odontoblast differentiation"
evidence=IMP] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISO] [GO:0090068 "positive regulation of cell
cycle process" evidence=ISO] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISO]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 RGD:620241
GO:GO:0005737 GO:GO:0043154 GO:GO:0030307 GO:GO:0043588
GO:GO:0006917 GO:GO:0010226 GO:GO:0001755 GO:GO:0031100
GO:GO:0043565 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0003705 GO:GO:0045843 GO:GO:0000122 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0001756 GO:GO:0014070 GO:GO:0030326 GO:GO:0001822
GO:GO:0048747 GO:GO:0043967 GO:GO:0030509 GO:GO:0010718
GO:GO:0001569 GO:GO:0030335 GO:GO:0022407 GO:GO:0042475
GO:GO:0090090 GO:GO:0060326 GO:GO:0001649 GO:GO:0060021
GO:GO:0001837 GO:GO:0008013 GO:GO:0002040 GO:GO:0030331
GO:GO:0060325 GO:GO:0046632 GO:GO:0043027 GO:GO:0060070
GO:GO:0030520 GO:GO:0021879 GO:GO:0021873 GO:GO:0070016
GO:GO:0030879 GO:GO:0022408 GO:GO:0021854 GO:GO:0033153
GO:GO:0042100 GO:GO:0032993 GO:GO:0043966 GO:GO:0021542
GO:GO:0022409 GO:GO:0032713 GO:GO:0016202 GO:GO:0030854
GO:GO:0043392 GO:GO:0071353 GO:GO:0060561 GO:GO:0060710
GO:GO:0071895 GO:GO:0050909 GO:GO:0061153 GO:GO:0043923
GO:GO:0043586 GO:GO:0030284 GO:GO:0032714 GO:GO:0045063
GO:GO:0021861 GO:GO:0048341 GO:GO:0048069 GO:GO:0032696
GO:GO:0030223 CTD:51176 eggNOG:NOG299161 HOGENOM:HOG000116032
HOVERGEN:HBG000419 KO:K04492 GO:GO:0035326 GO:GO:0060033
GO:GO:0021943 GO:GO:0071866 GO:GO:0071899 GO:GO:0090068
GO:GO:0071864 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GO:GO:0045295 EMBL:AF198533 IPI:IPI00213373 RefSeq:NP_569113.1
UniGene:Rn.228611 DisProt:DP00046 ProteinModelPortal:Q9QXN1
SMR:Q9QXN1 STRING:Q9QXN1 GeneID:161452 KEGG:rno:161452
InParanoid:Q9QXN1 NextBio:620971 ArrayExpress:Q9QXN1
Genevestigator:Q9QXN1 GermOnline:ENSRNOG00000010121 Uniprot:Q9QXN1
Length = 397
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 294 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 353
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 354 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESTSGTG 389
>UNIPROTKB|G3V7C1 [details] [associations]
symbol:Lef1 "Lymphoid enhancer binding factor 1, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001837
"epithelial to mesenchymal transition" evidence=IEA] [GO:0002040
"sprouting angiogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008301 "DNA binding, bending" evidence=IEA]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=IEA] [GO:0021542 "dentate gyrus development"
evidence=IEA] [GO:0021861 "forebrain radial glial cell
differentiation" evidence=IEA] [GO:0021873 "forebrain neuroblast
division" evidence=IEA] [GO:0021943 "formation of radial glial
scaffolds" evidence=IEA] [GO:0022408 "negative regulation of
cell-cell adhesion" evidence=IEA] [GO:0022409 "positive regulation
of cell-cell adhesion" evidence=IEA] [GO:0030223 "neutrophil
differentiation" evidence=IEA] [GO:0030284 "estrogen receptor
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0030854
"positive regulation of granulocyte differentiation" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0032696
"negative regulation of interleukin-13 production" evidence=IEA]
[GO:0032713 "negative regulation of interleukin-4 production"
evidence=IEA] [GO:0032714 "negative regulation of interleukin-5
production" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0033153 "T cell receptor V(D)J recombination"
evidence=IEA] [GO:0035326 "enhancer binding" evidence=IEA]
[GO:0042100 "B cell proliferation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043027 "cysteine-type
endopeptidase inhibitor activity involved in apoptotic process"
evidence=IEA] [GO:0043392 "negative regulation of DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043923 "positive regulation by host of viral transcription"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0045063
"T-helper 1 cell differentiation" evidence=IEA] [GO:0045295
"gamma-catenin binding" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048341 "paraxial
mesoderm formation" evidence=IEA] [GO:0050909 "sensory perception
of taste" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0060033 "anatomical structure regression"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0060325 "face morphogenesis"
evidence=IEA] [GO:0060326 "cell chemotaxis" evidence=IEA]
[GO:0060561 "apoptotic process involved in morphogenesis"
evidence=IEA] [GO:0060710 "chorio-allantoic fusion" evidence=IEA]
[GO:0061153 "trachea gland development" evidence=IEA] [GO:0070016
"armadillo repeat domain binding" evidence=IEA] [GO:0070742 "C2H2
zinc finger domain binding" evidence=IEA] [GO:0071353 "cellular
response to interleukin-4" evidence=IEA] [GO:0071864 "positive
regulation of cell proliferation in bone marrow" evidence=IEA]
[GO:0071866 "negative regulation of apoptotic process in bone
marrow" evidence=IEA] [GO:0071899 "negative regulation of estrogen
receptor binding" evidence=IEA] [GO:0090068 "positive regulation of
cell cycle process" evidence=IEA] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 RGD:620241
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 EMBL:CH473952 OMA:GYSGYIM InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 UniGene:Rn.228611
GeneTree:ENSGT00390000009964 Ensembl:ENSRNOT00000013694
Uniprot:G3V7C1
Length = 397
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 294 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 353
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 354 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESTSGTG 389
>UNIPROTKB|B3GQS6 [details] [associations]
symbol:LEF1 "Lymphoid enhancer-binding factor-1"
species:9823 "Sus scrofa" [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090068
"positive regulation of cell cycle process" evidence=IEA]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=IEA] [GO:0071866 "negative regulation of apoptotic process
in bone marrow" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0071353
"cellular response to interleukin-4" evidence=IEA] [GO:0070742
"C2H2 zinc finger domain binding" evidence=IEA] [GO:0070016
"armadillo repeat domain binding" evidence=IEA] [GO:0061153
"trachea gland development" evidence=IEA] [GO:0060710
"chorio-allantoic fusion" evidence=IEA] [GO:0060561 "apoptotic
process involved in morphogenesis" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] [GO:0060325 "face morphogenesis"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0060033 "anatomical structure
regression" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0048341 "paraxial mesoderm formation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045843
"negative regulation of striated muscle tissue development"
evidence=IEA] [GO:0045295 "gamma-catenin binding" evidence=IEA]
[GO:0045063 "T-helper 1 cell differentiation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0043923 "positive
regulation by host of viral transcription" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0043027 "cysteine-type
endopeptidase inhibitor activity involved in apoptotic process"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042100 "B cell proliferation" evidence=IEA] [GO:0035326
"enhancer binding" evidence=IEA] [GO:0033153 "T cell receptor V(D)J
recombination" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0032714 "negative regulation of interleukin-5
production" evidence=IEA] [GO:0032713 "negative regulation of
interleukin-4 production" evidence=IEA] [GO:0032696 "negative
regulation of interleukin-13 production" evidence=IEA] [GO:0030879
"mammary gland development" evidence=IEA] [GO:0030854 "positive
regulation of granulocyte differentiation" evidence=IEA]
[GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0030335
"positive regulation of cell migration" evidence=IEA] [GO:0030331
"estrogen receptor binding" evidence=IEA] [GO:0030326 "embryonic
limb morphogenesis" evidence=IEA] [GO:0030307 "positive regulation
of cell growth" evidence=IEA] [GO:0030284 "estrogen receptor
activity" evidence=IEA] [GO:0030223 "neutrophil differentiation"
evidence=IEA] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IEA] [GO:0022408 "negative regulation of
cell-cell adhesion" evidence=IEA] [GO:0021943 "formation of radial
glial scaffolds" evidence=IEA] [GO:0021873 "forebrain neuroblast
division" evidence=IEA] [GO:0021861 "forebrain radial glial cell
differentiation" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0010718 "positive regulation of
epithelial to mesenchymal transition" evidence=IEA] [GO:0008301
"DNA binding, bending" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002040 "sprouting angiogenesis" evidence=IEA]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0001569 "patterning of blood
vessels" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0005737
GO:GO:0030307 GO:GO:0006917 GO:GO:0043565 GO:GO:0045944
GO:GO:0003682 GO:GO:0005667 GO:GO:0003705 GO:GO:0045843
GO:GO:0000122 GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001756 GO:GO:0030326
GO:GO:0043967 GO:GO:0030509 GO:GO:0010718 GO:GO:0001569
GO:GO:0030335 GO:GO:0042475 GO:GO:0090090 GO:GO:0060326
GO:GO:0001649 GO:GO:0060021 GO:GO:0001837 GO:GO:0002040
GO:GO:0060325 GO:GO:0043027 GO:GO:0060070 GO:GO:0021873
GO:GO:0030879 GO:GO:0022408 GO:GO:0033153 GO:GO:0042100
GO:GO:0032993 GO:GO:0043966 GO:GO:0021542 GO:GO:0022409
GO:GO:0032713 GO:GO:0030854 GO:GO:0043392 GO:GO:0071353
GO:GO:0060561 GO:GO:0060710 GO:GO:0050909 GO:GO:0061153
GO:GO:0043923 GO:GO:0043586 GO:GO:0030284 GO:GO:0032714
GO:GO:0045063 GO:GO:0021861 GO:GO:0048341 GO:GO:0032696
GO:GO:0030223 CTD:51176 eggNOG:NOG299161 HOGENOM:HOG000116032
HOVERGEN:HBG000419 KO:K04492 OMA:GYSGYIM OrthoDB:EOG480HWS
GO:GO:0035326 GO:GO:0060033 GO:GO:0021943 GO:GO:0071866
GO:GO:0071899 GO:GO:0090068 GO:GO:0071864 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
EMBL:CU463204 EMBL:CU466301 EMBL:EU719607 RefSeq:NP_001123439.1
UniGene:Ssc.14025 STRING:B3GQS6 Ensembl:ENSSSCT00000010018
GeneID:100170126 KEGG:ssc:100170126 Uniprot:B3GQS6
Length = 398
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 295 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 354
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 355 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESTSGTG 390
>UNIPROTKB|Q5R2J3 [details] [associations]
symbol:PsLEF-1 "Uncharacterized protein" species:13735
"Pelodiscus sinensis" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0008301 "DNA binding, bending" evidence=ISS] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0005737 GO:GO:0030307
GO:GO:0006917 GO:GO:0043565 GO:GO:0045944 GO:GO:0003682
GO:GO:0005667 GO:GO:0003705 GO:GO:0045843 GO:GO:0000122
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0043967 GO:GO:0030509 GO:GO:0010718
GO:GO:0030335 GO:GO:0090090 GO:GO:0060326 GO:GO:0043027
GO:GO:0060070 GO:GO:0022408 GO:GO:0042100 GO:GO:0032993
GO:GO:0043966 GO:GO:0022409 GO:GO:0032713 GO:GO:0030854
GO:GO:0043392 GO:GO:0071353 GO:GO:0030284 GO:GO:0032714
GO:GO:0032696 HOVERGEN:HBG000419 OMA:GYSGYIM GO:GO:0035326
GO:GO:0071866 GO:GO:0071899 GO:GO:0090068 GO:GO:0071864
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 EMBL:AGCU01059196
EMBL:AGCU01059197 EMBL:AGCU01059198 EMBL:AGCU01059199
EMBL:AGCU01059200 EMBL:AGCU01059201 EMBL:AGCU01059202
EMBL:AGCU01059203 EMBL:AGCU01059204 EMBL:AGCU01059205
EMBL:AGCU01059206 EMBL:AB124566 ProteinModelPortal:Q5R2J3
SMR:Q5R2J3 Ensembl:ENSPSIT00000003484 Uniprot:Q5R2J3
Length = 398
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 295 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 354
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 355 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESTSGTG 390
>RGD|2319352 [details] [associations]
symbol:LOC100361823 "transcription factor 3" species:10116
"Rattus norvegicus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
RGD:2319352 GO:GO:0005634 GO:GO:0045892 GO:GO:0043588 GO:GO:0016055
GO:GO:0003677 GO:GO:0008595 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0035019 GO:GO:0046022 GO:GO:0048319 GO:GO:2000036
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 IPI:IPI00781056
Ensembl:ENSRNOT00000057962 ArrayExpress:F1M4H6 Uniprot:F1M4H6
Length = 456
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 211 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 270
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSN 186
++ H + +P W ++D G+ K ++ + ++ E +L V+ S
Sbjct: 271 RQLHAQLYPTWS--ARDNY------GKKKKRKREKQLSQTQSQQQIQEAEGAL--VSKSK 320
Query: 187 ETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQS 234
+ +QYL S S G + + + P P S+Q+
Sbjct: 321 KPCIQYLPPEKPCDSPASSHGSTLDSPATPSAALASPAAPAATHSEQA 368
>UNIPROTKB|E1BJ93 [details] [associations]
symbol:LEF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032993 "protein-DNA complex" evidence=IEA] [GO:0032714
"negative regulation of interleukin-5 production" evidence=IEA]
[GO:0032713 "negative regulation of interleukin-4 production"
evidence=IEA] [GO:0032696 "negative regulation of interleukin-13
production" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0030854 "positive regulation of granulocyte
differentiation" evidence=IEA] [GO:0030509 "BMP signaling pathway"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0030284 "estrogen receptor activity" evidence=IEA] [GO:0030223
"neutrophil differentiation" evidence=IEA] [GO:0022409 "positive
regulation of cell-cell adhesion" evidence=IEA] [GO:0022408
"negative regulation of cell-cell adhesion" evidence=IEA]
[GO:0021943 "formation of radial glial scaffolds" evidence=IEA]
[GO:0021873 "forebrain neuroblast division" evidence=IEA]
[GO:0021861 "forebrain radial glial cell differentiation"
evidence=IEA] [GO:0021542 "dentate gyrus development" evidence=IEA]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=IEA] [GO:0008301 "DNA binding, bending"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002040 "sprouting angiogenesis" evidence=IEA]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0001569 "patterning of blood
vessels" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0090068 "positive regulation
of cell cycle process" evidence=IEA] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=IEA] [GO:0071866
"negative regulation of apoptotic process in bone marrow"
evidence=IEA] [GO:0071864 "positive regulation of cell
proliferation in bone marrow" evidence=IEA] [GO:0071353 "cellular
response to interleukin-4" evidence=IEA] [GO:0070742 "C2H2 zinc
finger domain binding" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0061153 "trachea gland
development" evidence=IEA] [GO:0060710 "chorio-allantoic fusion"
evidence=IEA] [GO:0060561 "apoptotic process involved in
morphogenesis" evidence=IEA] [GO:0060326 "cell chemotaxis"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0060033 "anatomical structure regression"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0048341
"paraxial mesoderm formation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045843 "negative regulation of striated muscle
tissue development" evidence=IEA] [GO:0045295 "gamma-catenin
binding" evidence=IEA] [GO:0045063 "T-helper 1 cell
differentiation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0043923 "positive regulation by host of viral transcription"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043392 "negative regulation of DNA binding" evidence=IEA]
[GO:0043027 "cysteine-type endopeptidase inhibitor activity
involved in apoptotic process" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0042100 "B cell
proliferation" evidence=IEA] [GO:0035326 "enhancer binding"
evidence=IEA] [GO:0033153 "T cell receptor V(D)J recombination"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0005737 GO:GO:0030307 GO:GO:0006917 GO:GO:0043565
GO:GO:0045944 GO:GO:0003682 GO:GO:0005667 GO:GO:0003705
GO:GO:0045843 GO:GO:0000122 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001756
GO:GO:0030326 GO:GO:0043967 GO:GO:0030509 GO:GO:0010718
GO:GO:0001569 GO:GO:0030335 GO:GO:0042475 GO:GO:0090090
GO:GO:0060326 GO:GO:0001649 GO:GO:0060021 GO:GO:0001837
GO:GO:0002040 GO:GO:0060325 GO:GO:0043027 GO:GO:0060070
GO:GO:0021873 GO:GO:0030879 GO:GO:0022408 GO:GO:0033153
GO:GO:0042100 GO:GO:0032993 GO:GO:0043966 GO:GO:0021542
GO:GO:0022409 GO:GO:0032713 GO:GO:0030854 GO:GO:0043392
GO:GO:0071353 GO:GO:0060561 GO:GO:0060710 GO:GO:0050909
GO:GO:0061153 GO:GO:0043923 GO:GO:0043586 GO:GO:0030284
GO:GO:0032714 GO:GO:0045063 GO:GO:0021861 GO:GO:0048341
GO:GO:0032696 GO:GO:0030223 CTD:51176 KO:K04492 OMA:GYSGYIM
GO:GO:0035326 GO:GO:0060033 GO:GO:0021943 GO:GO:0071866
GO:GO:0071899 GO:GO:0090068 GO:GO:0071864 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
EMBL:DAAA02016616 EMBL:DAAA02016617 IPI:IPI00706448
RefSeq:NP_001179785.1 UniGene:Bt.18467 Ensembl:ENSBTAT00000008991
GeneID:535399 KEGG:bta:535399 NextBio:20876731 Uniprot:E1BJ93
Length = 399
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 296 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 355
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 356 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESTSGTG 391
>UNIPROTKB|F1Q334 [details] [associations]
symbol:LEF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:51176 KO:K04492 OMA:GYSGYIM InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
EMBL:AAEX03016813 RefSeq:XP_863334.2 Ensembl:ENSCAFT00000017891
GeneID:478507 KEGG:cfa:478507 Uniprot:F1Q334
Length = 400
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 297 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 356
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 357 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESTSGTG 392
>UNIPROTKB|Q56R97 [details] [associations]
symbol:Lef-1 "Lymphoid enhancer binding factor 1"
species:452646 "Neovison vison" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0008301 "DNA binding, bending" evidence=ISS]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 HOVERGEN:HBG000419 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 EMBL:AY757356
ProteinModelPortal:Q56R97 SMR:Q56R97 Uniprot:Q56R97
Length = 400
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 297 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 356
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 357 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESTSGTG 392
>UNIPROTKB|Q90ZB6 [details] [associations]
symbol:tcf7l1-b "Transcription factor 7-like 1-B"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 KO:K04490
EMBL:AF287149 EMBL:BC077764 RefSeq:NP_001080938.1 UniGene:Xl.85456
ProteinModelPortal:Q90ZB6 SMR:Q90ZB6 MINT:MINT-4979333
GeneID:394281 KEGG:xla:394281 CTD:394281 Xenbase:XB-GENE-1031992
Uniprot:Q90ZB6
Length = 551
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 41 KESQRRGYCSRHLSLKG-AGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRT 99
K+ G S +LS K K I++P+NAFM++ K RAKV +++
Sbjct: 294 KQEPSSGNISPNLSTKSNVVVKKEEEKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAA 353
Query: 100 VSKILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWK----WCSKDKRK 146
+++ILG W+SL EE+ KY+ELA + ++ H + +P W + K KRK
Sbjct: 354 INQILGRRWHSLSREEQAKYYELARKERQLHSQLYPSWSARDNYGKKKKRK 404
>UNIPROTKB|O93345 [details] [associations]
symbol:Lef-1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001569 "patterning of blood vessels" evidence=IBA]
[GO:0001649 "osteoblast differentiation" evidence=IBA] [GO:0001755
"neural crest cell migration" evidence=IBA] [GO:0001756
"somitogenesis" evidence=ISS;IBA] [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISS;IBA] [GO:0002040 "sprouting
angiogenesis" evidence=IBA] [GO:0003682 "chromatin binding"
evidence=ISS;IBA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IBA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISS;IBA] [GO:0005667
"transcription factor complex" evidence=ISS;IBA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IBA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS;IBA] [GO:0006917 "induction of apoptosis"
evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=IBA] [GO:0016202
"regulation of striated muscle tissue development" evidence=IBA]
[GO:0021542 "dentate gyrus development" evidence=IBA] [GO:0021854
"hypothalamus development" evidence=IBA] [GO:0021861 "forebrain
radial glial cell differentiation" evidence=IBA] [GO:0021873
"forebrain neuroblast division" evidence=IBA] [GO:0021879
"forebrain neuron differentiation" evidence=IBA] [GO:0021943
"formation of radial glial scaffolds" evidence=IBA] [GO:0022407
"regulation of cell-cell adhesion" evidence=IBA] [GO:0030223
"neutrophil differentiation" evidence=IBA] [GO:0030326 "embryonic
limb morphogenesis" evidence=ISS;IBA] [GO:0030331 "estrogen
receptor binding" evidence=IBA] [GO:0030509 "BMP signaling pathway"
evidence=IBA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IBA] [GO:0030879 "mammary gland
development" evidence=IBA] [GO:0032696 "negative regulation of
interleukin-13 production" evidence=IBA] [GO:0032713 "negative
regulation of interleukin-4 production" evidence=IBA] [GO:0032714
"negative regulation of interleukin-5 production" evidence=IBA]
[GO:0035326 "enhancer binding" evidence=IBA] [GO:0042100 "B cell
proliferation" evidence=IBA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
evidence=IBA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IBA] [GO:0045295 "gamma-catenin binding"
evidence=IBA] [GO:0046632 "alpha-beta T cell differentiation"
evidence=IBA] [GO:0048341 "paraxial mesoderm formation"
evidence=ISS;IBA] [GO:0048747 "muscle fiber development"
evidence=IBA] [GO:0060325 "face morphogenesis" evidence=IBA]
[GO:0060561 "apoptotic process involved in morphogenesis"
evidence=IBA] [GO:0060710 "chorio-allantoic fusion" evidence=IBA]
[GO:0061153 "trachea gland development" evidence=IBA] [GO:0070016
"armadillo repeat domain binding" evidence=IBA] [GO:0071864
"positive regulation of cell proliferation in bone marrow"
evidence=IBA] [GO:0071866 "negative regulation of apoptotic process
in bone marrow" evidence=IBA] [GO:0071895 "odontoblast
differentiation" evidence=IBA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010718 "positive regulation of
epithelial to mesenchymal transition" evidence=IEA] [GO:0022408
"negative regulation of cell-cell adhesion" evidence=IEA]
[GO:0022409 "positive regulation of cell-cell adhesion"
evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0030307 "positive regulation of cell growth"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030854 "positive regulation of granulocyte
differentiation" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0033153 "T cell receptor V(D)J recombination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043027 "cysteine-type endopeptidase inhibitor
activity involved in apoptotic process" evidence=IEA] [GO:0043392
"negative regulation of DNA binding" evidence=IEA] [GO:0043586
"tongue development" evidence=IEA] [GO:0043923 "positive regulation
by host of viral transcription" evidence=IEA] [GO:0043966 "histone
H3 acetylation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0045063 "T-helper 1 cell differentiation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060033 "anatomical structure regression"
evidence=IEA] [GO:0060326 "cell chemotaxis" evidence=IEA]
[GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA]
[GO:0071353 "cellular response to interleukin-4" evidence=IEA]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=IEA] [GO:0090068 "positive regulation of cell cycle
process" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0060021 "palate development"
evidence=ISS] [GO:0008301 "DNA binding, bending" evidence=ISS]
[GO:0021766 "hippocampus development" evidence=ISS] [GO:0045843
"negative regulation of striated muscle tissue development"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0048468 "cell
development" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=NAS;IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0048069 "eye pigmentation" evidence=IMP] [GO:0035108 "limb
morphogenesis" evidence=NAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS;IMP] [GO:0045665
"negative regulation of neuron differentiation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0005737 GO:GO:0043154 GO:GO:0030307 GO:GO:0006917
GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003682 GO:GO:0005667 GO:GO:0003705 GO:GO:0045843
GO:GO:0000122 GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001756 GO:GO:0030326
GO:GO:0048747 GO:GO:0043967 GO:GO:0030509 GO:GO:0010718
GO:GO:0001569 GO:GO:0030335 GO:GO:0022407 GO:GO:0090090
GO:GO:0060326 GO:GO:0001649 GO:GO:0060021 GO:GO:0001837
GO:GO:0008013 GO:GO:0002040 GO:GO:0030331 GO:GO:0060325
GO:GO:0046632 GO:GO:0043027 GO:GO:0060070 GO:GO:0030520
GO:GO:0021879 GO:GO:0021873 GO:GO:0070016 GO:GO:0030879
GO:GO:0022408 GO:GO:0021854 GO:GO:0042100 GO:GO:0032993
GO:GO:0043966 GO:GO:0021542 GO:GO:0022409 GO:GO:0032713
GO:GO:0030854 GO:GO:0043392 GO:GO:0071353 GO:GO:0060561
GO:GO:0060710 GO:GO:0071895 GO:GO:0061153 GO:GO:0030284
GO:GO:0032714 GO:GO:0021861 GO:GO:0048341 GO:GO:0048069
GO:GO:0032696 GO:GO:0030223 CTD:51176 eggNOG:NOG299161
HOGENOM:HOG000116032 HOVERGEN:HBG000419 KO:K04492 OMA:GYSGYIM
OrthoDB:EOG480HWS GO:GO:0035326 GO:GO:0021943 GO:GO:0071866
GO:GO:0071899 GO:GO:0090068 GO:GO:0071864 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GO:GO:0045295
GeneTree:ENSGT00390000009964 HSSP:P27782 EMBL:AADN02008806
EMBL:AADN02008797 EMBL:AADN02008798 EMBL:AADN02008799
EMBL:AADN02008800 EMBL:AADN02008801 EMBL:AADN02008802
EMBL:AADN02008803 EMBL:AADN02008804 EMBL:AADN02008805 EMBL:AF064462
EMBL:AB188385 IPI:IPI00586718 RefSeq:NP_990344.1 UniGene:Gga.2694
SMR:O93345 STRING:O93345 Ensembl:ENSGALT00000017142 GeneID:395865
KEGG:gga:395865 InParanoid:O93345 NextBio:20815932 Uniprot:O93345
Length = 369
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 266 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 325
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 326 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESASGTG 361
>ZFIN|ZDB-GENE-980526-102 [details] [associations]
symbol:sox19a "SRY-box containing gene 19a"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=IC] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-980526-102 GO:GO:0051091 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 EMBL:BX119902 InterPro:IPR022097
Pfam:PF12336 IPI:IPI00931891 Ensembl:ENSDART00000013309
ArrayExpress:E7F9F4 Bgee:E7F9F4 Uniprot:E7F9F4
Length = 314
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 68 DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEVK 127
D+++RPMNAFM++S+ R K+ Q +P N +SK LG W L EK+ + + A ++
Sbjct: 49 DKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLR 108
Query: 128 EAHFKAHPEWKWCSKDKRKS 147
H K +P++K+ K +RK+
Sbjct: 109 ALHMKEYPDYKY--KPRRKT 126
>ZFIN|ZDB-GENE-001103-1 [details] [associations]
symbol:sox9a "SRY-box containing gene 9a"
species:7955 "Danio rerio" [GO:0048839 "inner ear development"
evidence=IGI;IMP] [GO:0033339 "pectoral fin development"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0048708 "astrocyte differentiation" evidence=IMP] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0043049 "otic
placode formation" evidence=IGI] [GO:0035118 "embryonic pectoral
fin morphogenesis" evidence=IMP] [GO:0030916 "otic vesicle
formation" evidence=IGI] [GO:0060536 "cartilage morphogenesis"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-001103-1
GO:GO:0005737 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0048709 GO:GO:0035118 GO:GO:0043049
GO:GO:0060536 GO:GO:0048708 GeneTree:ENSGT00670000097649
HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 OMA:GAGHVWM
EMBL:CU074420 EMBL:AF277096 EMBL:AY090034 EMBL:AY090035
IPI:IPI00507610 RefSeq:NP_571718.1 UniGene:Dr.80814 SMR:Q9DFH2
STRING:Q9DFH2 Ensembl:ENSDART00000005676 GeneID:60641
KEGG:dre:60641 CTD:60641 InParanoid:Q9DFH2 NextBio:20892427
Uniprot:Q9DFH2
Length = 462
Score = 156 (60.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 102 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEVEKRPFVEEAE 161
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGS 158
++ H K HP++K+ + ++ G + GS
Sbjct: 162 RLRVQHKKDHPDYKYQPRRRKSVKNGQSESEDGS 195
Score = 41 (19.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 167 FMPDDLEHFENSLEMVT--------SSNETTVQYLLHPTGRLSNIYSTGFQIPISSE 215
F L+H+ S +T S Y H G+ S +YST F SS+
Sbjct: 369 FNVQHLQHYSTSFPSITRAQYDYSDSHQGGASSYYTHAGGQSSGLYST-FSYMSSSQ 424
>MGI|MGI:98358 [details] [associations]
symbol:Sox10 "SRY-box containing gene 10" species:10090 "Mus
musculus" [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0000980
"RNA polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IGI]
[GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007422 "peripheral nervous system development" evidence=IGI]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0014015 "positive regulation of gliogenesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0030318
"melanocyte differentiation" evidence=IMP] [GO:0031315 "extrinsic
to mitochondrial outer membrane" evidence=IDA] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA;IMP] [GO:0048469 "cell maturation"
evidence=IGI;IMP] [GO:0048484 "enteric nervous system development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IGI;IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048709 "oligodendrocyte differentiation" evidence=IMP]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IDA] InterPro:IPR009071 MGI:MGI:98358
Pfam:PF00505 GO:GO:0005634 GO:GO:0043066 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0048863 GO:GO:0007422
GO:GO:0003682 GO:GO:0003705 GO:GO:0000980 GO:GO:0000978
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0048589 GO:GO:0090090 GO:GO:0030318 GO:GO:0048709
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546
GO:GO:0048469 GO:GO:0014015 CTD:6663 eggNOG:NOG295709
GeneTree:ENSGT00670000097649 HOVERGEN:HBG002061 KO:K09270
OrthoDB:EOG41C6WH InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ
EMBL:AF017182 EMBL:AF047043 EMBL:U66141 EMBL:BC018551 EMBL:BC023356
EMBL:BC025171 EMBL:Z18959 EMBL:U70441 IPI:IPI00929823 PIR:S30242
RefSeq:NP_035567.1 UniGene:Mm.276739 ProteinModelPortal:Q04888
SMR:Q04888 STRING:Q04888 PhosphoSite:Q04888 PaxDb:Q04888
PRIDE:Q04888 Ensembl:ENSMUST00000040019 GeneID:20665 KEGG:mmu:20665
InParanoid:Q04888 ChiTaRS:SOX10 NextBio:299123 Bgee:Q04888
CleanEx:MM_SOX10 CleanEx:MM_SOX21 Genevestigator:Q04888
GermOnline:ENSMUSG00000033006 Uniprot:Q04888
Length = 466
Score = 157 (60.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/100 (30%), Positives = 56/100 (56%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L +K+ + E A
Sbjct: 99 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 158
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL--GSMDEG 162
++ H K HP++K+ + ++ G + G ++G
Sbjct: 159 RLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEAEQG 198
Score = 40 (19.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 317 SEPPGGGQENKGTGPQTSHFK 337
+E PGG E G +H+K
Sbjct: 188 AECPGGEAEQGGAAAIQAHYK 208
>UNIPROTKB|Q9UJU2 [details] [associations]
symbol:LEF1 "Lymphoid enhancer-binding factor 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0022407 "regulation of cell-cell adhesion" evidence=IEA]
[GO:0033153 "T cell receptor V(D)J recombination" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=IEA] [GO:0050909 "sensory perception of
taste" evidence=IEA] [GO:0060033 "anatomical structure regression"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IBA] [GO:0001755 "neural crest cell migration"
evidence=IBA] [GO:0001756 "somitogenesis" evidence=IBA] [GO:0002040
"sprouting angiogenesis" evidence=IBA] [GO:0003682 "chromatin
binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IBA] [GO:0006917 "induction of apoptosis"
evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
[GO:0016202 "regulation of striated muscle tissue development"
evidence=IBA] [GO:0021542 "dentate gyrus development" evidence=IBA]
[GO:0021854 "hypothalamus development" evidence=IBA] [GO:0021861
"forebrain radial glial cell differentiation" evidence=IBA]
[GO:0021873 "forebrain neuroblast division" evidence=IBA]
[GO:0021879 "forebrain neuron differentiation" evidence=IBA]
[GO:0021943 "formation of radial glial scaffolds" evidence=IBA]
[GO:0022008 "neurogenesis" evidence=IBA] [GO:0030326 "embryonic
limb morphogenesis" evidence=IBA] [GO:0030509 "BMP signaling
pathway" evidence=IBA] [GO:0030879 "mammary gland development"
evidence=IBA] [GO:0042100 "B cell proliferation" evidence=IBA]
[GO:0046632 "alpha-beta T cell differentiation" evidence=IBA]
[GO:0048069 "eye pigmentation" evidence=IBA] [GO:0048341 "paraxial
mesoderm formation" evidence=IBA] [GO:0048699 "generation of
neurons" evidence=IBA] [GO:0048747 "muscle fiber development"
evidence=IBA] [GO:0060325 "face morphogenesis" evidence=IBA]
[GO:0060561 "apoptotic process involved in morphogenesis"
evidence=IBA] [GO:0060710 "chorio-allantoic fusion" evidence=IBA]
[GO:0061153 "trachea gland development" evidence=IBA] [GO:0071895
"odontoblast differentiation" evidence=IBA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0008301 "DNA binding, bending" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0001649 "osteoblast differentiation"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0045063 "T-helper
1 cell differentiation" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0032714 "negative regulation of interleukin-5 production"
evidence=IDA] [GO:0043392 "negative regulation of DNA binding"
evidence=IDA] [GO:0032713 "negative regulation of interleukin-4
production" evidence=IDA] [GO:0032696 "negative regulation of
interleukin-13 production" evidence=IDA] [GO:0071864 "positive
regulation of cell proliferation in bone marrow" evidence=IMP]
[GO:0071866 "negative regulation of apoptotic process in bone
marrow" evidence=IMP] [GO:0030223 "neutrophil differentiation"
evidence=IMP] [GO:0071353 "cellular response to interleukin-4"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0030284 "estrogen receptor activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IMP] [GO:0030335
"positive regulation of cell migration" evidence=IMP;IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0030854 "positive regulation of granulocyte
differentiation" evidence=IMP;IDA] [GO:0010718 "positive regulation
of epithelial to mesenchymal transition" evidence=IMP] [GO:0042393
"histone binding" evidence=IPI] [GO:0043966 "histone H3
acetylation" evidence=IMP] [GO:0043967 "histone H4 acetylation"
evidence=IMP] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IDA;IMP] [GO:0060326 "cell chemotaxis"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0030307 "positive regulation of cell
growth" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IDA;TAS;IPI] [GO:0043027 "cysteine-type endopeptidase
inhibitor activity involved in apoptotic process" evidence=IMP]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IMP] [GO:0035326
"enhancer binding" evidence=IDA] [GO:0043923 "positive regulation
by host of viral transcription" evidence=IDA] [GO:0070742 "C2H2
zinc finger domain binding" evidence=IPI] [GO:0090068 "positive
regulation of cell cycle process" evidence=IDA] [GO:0022408
"negative regulation of cell-cell adhesion" evidence=IDA]
[GO:0022409 "positive regulation of cell-cell adhesion"
evidence=IDA] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=IDA] [GO:0010628 "positive regulation of gene
expression" evidence=IDA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IDA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=ISS] [GO:0060021 "palate development"
evidence=ISS] [GO:0045295 "gamma-catenin binding" evidence=IPI]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0071345 "cellular response to cytokine stimulus" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0001228 "RNA
polymerase II transcription regulatory region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0032993 "protein-DNA complex"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0070016 "armadillo
repeat domain binding" evidence=IPI] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0030307 GO:GO:0043588
Pathway_Interaction_DB:wnt_canonical_pathway GO:GO:0006917
GO:GO:0016055 GO:GO:0010226 GO:GO:0008284 GO:GO:0001755
GO:GO:0031100 GO:GO:0003682 GO:GO:0005667 GO:GO:0003705
GO:GO:0045843 GO:GO:0000122 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001756
GO:GO:0044212 GO:GO:0030326 GO:GO:0001822 GO:GO:0048747
GO:GO:0043967 GO:GO:0030509 GO:GO:0010718 GO:GO:0001569
GO:GO:0030335 GO:GO:0022407 EMBL:CH471057 GO:GO:0042475
GO:GO:0090090 GO:GO:0060326 GO:GO:0001649 GO:GO:0060021
GO:GO:0001837 GO:GO:0008013 GO:GO:0002040 GO:GO:0030331
GO:GO:0060325 GO:GO:0043027 GO:GO:0060070 GO:GO:0000977
GO:GO:0021879 GO:GO:0021873 GO:GO:0030879 GO:GO:0022408
GO:GO:0021854 GO:GO:0033153 GO:GO:0042100 GO:GO:0032993
GO:GO:0043966 GO:GO:0021542 GO:GO:0022409 GO:GO:0032713
GO:GO:0016202 GO:GO:0030854 GO:GO:0043392 GO:GO:0071353
GO:GO:0060561 GO:GO:0060710 GO:GO:0071895 GO:GO:0050909
GO:GO:0061153 GO:GO:0043923 GO:GO:0043586 GO:GO:0030284
GO:GO:0032714 GO:GO:0045063 GO:GO:0001228 GO:GO:0021861
EMBL:AC118062 GO:GO:0048341 GO:GO:0048069 GO:GO:0032696
GO:GO:0030223 EMBL:AF288571 EMBL:AF198532 EMBL:AF294627
EMBL:AK294395 EMBL:AK303272 EMBL:AC092539 EMBL:AC097067
EMBL:AC123576 EMBL:BC040559 EMBL:BC050632 IPI:IPI00007156
IPI:IPI00220455 IPI:IPI00220456 IPI:IPI00220457 IPI:IPI00651680
IPI:IPI00909155 IPI:IPI00946679 PIR:A39625 RefSeq:NP_001124185.1
RefSeq:NP_001124186.1 RefSeq:NP_001159591.1 RefSeq:NP_057353.1
UniGene:Hs.555947 ProteinModelPortal:Q9UJU2 SMR:Q9UJU2
DIP:DIP-29946N IntAct:Q9UJU2 STRING:Q9UJU2 PhosphoSite:Q9UJU2
DMDM:8928194 PaxDb:Q9UJU2 PRIDE:Q9UJU2 DNASU:51176
Ensembl:ENST00000265165 Ensembl:ENST00000379951
Ensembl:ENST00000438313 Ensembl:ENST00000506680
Ensembl:ENST00000510624 GeneID:51176 KEGG:hsa:51176 UCSC:uc003hyt.2
UCSC:uc003hyu.2 UCSC:uc003hyv.2 CTD:51176 GeneCards:GC04M108968
HGNC:HGNC:6551 HPA:CAB019405 HPA:HPA002087 MIM:153245
neXtProt:NX_Q9UJU2 PharmGKB:PA30331 eggNOG:NOG299161
HOGENOM:HOG000116032 HOVERGEN:HBG000419 InParanoid:Q9UJU2 KO:K04492
OMA:GYSGYIM OrthoDB:EOG480HWS ChiTaRS:LEF1 GenomeRNAi:51176
NextBio:54133 ArrayExpress:Q9UJU2 Bgee:Q9UJU2 CleanEx:HS_LEF1
Genevestigator:Q9UJU2 GermOnline:ENSG00000138795 GO:GO:0035326
GO:GO:0060033 GO:GO:0021943 GO:GO:0071866 GO:GO:0071899
GO:GO:0090068 GO:GO:0071864 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 Uniprot:Q9UJU2
Length = 399
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 296 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 355
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTG 164
++ H + +P W ++D R KL GTG
Sbjct: 356 RQLHMQLYPGWS--ARDNYGKKKKRKREKLQESASGTG 391
>UNIPROTKB|F1PYV9 [details] [associations]
symbol:TCF7L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AAEX03010938
Ensembl:ENSCAFT00000012528 Uniprot:F1PYV9
Length = 463
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/168 (25%), Positives = 80/168 (47%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 218 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 277
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSN 186
++ H + +P W ++D G+ K ++ + ++ E +L + S
Sbjct: 278 RQLHSQLYPTWS--ARDNY------GKKKKRKREKQLSQTQSQQQVQEAEGAL--ASKSK 327
Query: 187 ETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQS 234
+ VQYL S S G + + + P P S+Q+
Sbjct: 328 KPCVQYLPPEKSCDSPASSHGSMLDSPATPSAALASPAAPAATHSEQA 375
>ZFIN|ZDB-GENE-990714-26 [details] [associations]
symbol:lef1 "lymphocyte enhancer binding factor 1"
species:7955 "Danio rerio" [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA;IGI;IMP] [GO:0071895 "odontoblast
differentiation" evidence=IBA] [GO:0048341 "paraxial mesoderm
formation" evidence=IBA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IBA] [GO:0006917 "induction of apoptosis"
evidence=IBA] [GO:0001569 "patterning of blood vessels"
evidence=IBA] [GO:0048069 "eye pigmentation" evidence=IBA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IBA]
[GO:0016202 "regulation of striated muscle tissue development"
evidence=IBA] [GO:0001649 "osteoblast differentiation"
evidence=IBA] [GO:0060325 "face morphogenesis" evidence=IBA]
[GO:0071866 "negative regulation of apoptotic process in bone
marrow" evidence=IBA] [GO:0032696 "negative regulation of
interleukin-13 production" evidence=IBA] [GO:0002040 "sprouting
angiogenesis" evidence=IBA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IBA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IBA] [GO:0021542 "dentate gyrus development" evidence=IBA]
[GO:0035326 "enhancer binding" evidence=IBA] [GO:0030509 "BMP
signaling pathway" evidence=IBA] [GO:0070016 "armadillo repeat
domain binding" evidence=IBA] [GO:0005667 "transcription factor
complex" evidence=IBA] [GO:0045295 "gamma-catenin binding"
evidence=IBA] [GO:0030879 "mammary gland development" evidence=IBA]
[GO:0046632 "alpha-beta T cell differentiation" evidence=IBA]
[GO:0022407 "regulation of cell-cell adhesion" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0008013 "beta-catenin
binding" evidence=IBA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IBA] [GO:0032713 "negative regulation of
interleukin-4 production" evidence=IBA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IBA] [GO:0071864 "positive regulation of cell
proliferation in bone marrow" evidence=IBA] [GO:0030331 "estrogen
receptor binding" evidence=IBA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IBA] [GO:0021943 "formation of
radial glial scaffolds" evidence=IBA] [GO:0061153 "trachea gland
development" evidence=IBA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IBA] [GO:0021873 "forebrain neuroblast division"
evidence=IBA] [GO:0021861 "forebrain radial glial cell
differentiation" evidence=IBA] [GO:0003682 "chromatin binding"
evidence=IBA] [GO:0030223 "neutrophil differentiation"
evidence=IBA] [GO:0042100 "B cell proliferation" evidence=IBA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IBA] [GO:0032714
"negative regulation of interleukin-5 production" evidence=IBA]
[GO:0060561 "apoptotic process involved in morphogenesis"
evidence=IBA] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0048747
"muscle fiber development" evidence=IMP] [GO:0001755 "neural crest
cell migration" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IPI] [GO:0010628 "positive regulation of gene
expression" evidence=IMP] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IGI] [GO:1900052
"regulation of retinoic acid biosynthetic process" evidence=IGI]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0008301 "DNA binding,
bending" evidence=ISS] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0021979 "hypothalamus cell
differentiation" evidence=IMP] [GO:0033334 "fin morphogenesis"
evidence=IMP] [GO:0033339 "pectoral fin development" evidence=IMP]
[GO:0048922 "posterior lateral line neuromast deposition"
evidence=IMP] [GO:0033336 "caudal fin development" evidence=IMP]
[GO:0048916 "posterior lateral line development" evidence=IMP]
[GO:0021879 "forebrain neuron differentiation" evidence=IMP]
[GO:0021854 "hypothalamus development" evidence=IMP] [GO:0060784
"regulation of cell proliferation involved in tissue homeostasis"
evidence=IMP] [GO:0033333 "fin development" evidence=IMP]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
ZFIN:ZDB-GENE-990714-26 GO:GO:0005737 GO:GO:0043154 GO:GO:0006917
GO:GO:0001755 GO:GO:0043565 GO:GO:0003682 GO:GO:0005667
GO:GO:0003705 GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001756 GO:GO:0030326
GO:GO:0050769 GO:GO:0048747 GO:GO:0030509 GO:GO:0001569
GO:GO:0022407 GO:GO:0010628 GO:GO:0001649 GO:GO:0001837
GO:GO:0008013 GO:GO:0002040 GO:GO:0030331 GO:GO:0060325
GO:GO:0046632 GO:GO:0060070 GO:GO:0030520 GO:GO:0033339
GO:GO:0021879 GO:GO:0021873 GO:GO:0070016 GO:GO:0031101
GO:GO:0030879 GO:GO:0042100 GO:GO:0021542 GO:GO:0032713
GO:GO:0016202 GO:GO:0060561 GO:GO:0071895 GO:GO:0061153
GO:GO:0032714 GO:GO:0021861 GO:GO:0048341 GO:GO:0048069
GO:GO:0032696 GO:GO:0030223 CTD:51176 eggNOG:NOG299161
HOGENOM:HOG000116032 HOVERGEN:HBG000419 KO:K04492 OMA:GYSGYIM
OrthoDB:EOG480HWS GO:GO:0035326 GO:GO:0021943 GO:GO:0071866
GO:GO:0071864 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GO:GO:0045295 GO:GO:0021979 GeneTree:ENSGT00390000009964
GO:GO:0060784 HSSP:P27782 GO:GO:1900052 EMBL:BX572104 EMBL:CR391978
EMBL:AF136454 EMBL:BC162097 IPI:IPI00497827 RefSeq:NP_571501.1
UniGene:Dr.64686 SMR:Q9W7C0 STRING:Q9W7C0
Ensembl:ENSDART00000132405 GeneID:30701 KEGG:dre:30701
InParanoid:Q9W7C0 NextBio:20807051 GO:GO:0033336 GO:GO:0048922
Uniprot:Q9W7C0
Length = 365
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 31/99 (31%), Positives = 56/99 (56%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
+ I++P+NAFM++ K RA V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 262 RPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 321
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGE 165
++ H + +P W ++D R K+ GTG+
Sbjct: 322 RQLHMQLYPGWS--ARDNYGKKKKRKREKIQEPASGTGQ 358
>ZFIN|ZDB-GENE-991110-10 [details] [associations]
symbol:tcf7l1b "transcription factor 7-like 1b
(T-cell specific, HMG-box)" species:7955 "Danio rerio" [GO:0016055
"Wnt receptor signaling pathway" evidence=IEA] [GO:0021903
"rostrocaudal neural tube patterning" evidence=IMP] [GO:0030901
"midbrain development" evidence=IMP] [GO:0010456 "cell
proliferation in dorsal spinal cord" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IBA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0003682 "chromatin binding" evidence=IBA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IBA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IBA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IBA] [GO:0008013
"beta-catenin binding" evidence=IBA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IBA]
[GO:0030902 "hindbrain development" evidence=IMP] [GO:0035284
"brain segmentation" evidence=IMP] [GO:0008284 "positive regulation
of cell proliferation" evidence=IGI] [GO:0021513 "spinal cord
dorsal/ventral patterning" evidence=IGI] [GO:0048699 "generation of
neurons" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 ZFIN:ZDB-GENE-991110-10
GO:GO:0008284 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0030901 GO:GO:0030902 GO:GO:0008013 GO:GO:0009880
GO:GO:0060070 GO:GO:0021903 GO:GO:0048699 GO:GO:0035284
HOGENOM:HOG000116032 HOVERGEN:HBG000419 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916 OrthoDB:EOG46MBJM
GO:GO:0010456 EMBL:AY221031 IPI:IPI00492715 RefSeq:NP_571371.1
UniGene:Dr.8108 ProteinModelPortal:Q800Q5 SMR:Q800Q5 STRING:Q800Q5
GeneID:30556 KEGG:dre:30556 CTD:30556 InParanoid:Q800Q5
NextBio:20806931 ArrayExpress:Q800Q5 Uniprot:Q800Q5
Length = 551
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K I++P+NAFM++ K RAKV ++N +++ILG W+SL EE+ KY+ELA +
Sbjct: 323 KPHIKKPLNAFMLYMKEMRAKVVAECTLKENAAINQILGRRWHSLSREEQAKYYELARKE 382
Query: 127 KEAHFKAHPEW 137
++ H + +P W
Sbjct: 383 RQLHSQLYPGW 393
>RGD|1311671 [details] [associations]
symbol:Tcf7l1 "transcription factor 7-like 1 (T-cell specific,
HMG-box)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008595 "anterior/posterior
axis specification, embryo" evidence=ISO] [GO:0035019 "somatic stem
cell maintenance" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046022 "positive regulation of
transcription from RNA polymerase II promoter during mitosis"
evidence=ISO] [GO:0048319 "axial mesoderm morphogenesis"
evidence=ISO] [GO:0048863 "stem cell differentiation" evidence=ISO]
[GO:2000036 "regulation of stem cell maintenance" evidence=ISO]
REFSEQ:NM_001107865 Ncbi:NP_001101335
Length = 587
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 342 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 401
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSN 186
++ H + +P W ++D G+ K ++ + ++ E +L V+ S
Sbjct: 402 RQLHAQLYPTWS--ARDNY------GKKKKRKREKQLSQTQSQQQIQEAEGAL--VSKSK 451
Query: 187 ETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQS 234
+ +QYL S S G + + + P P S+Q+
Sbjct: 452 KPCIQYLPPEKPCDSPASSHGSTLDSPATPSAALASPAAPAATHSEQA 499
>UNIPROTKB|E7ES08 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 EMBL:AF003626 HGNC:HGNC:5004 IPI:IPI00643317
ProteinModelPortal:E7ES08 SMR:E7ES08 PRIDE:E7ES08
Ensembl:ENST00000419110 ArrayExpress:E7ES08 Bgee:E7ES08
Uniprot:E7ES08
Length = 188
Score = 137 (53.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 43/160 (26%), Positives = 71/160 (44%)
Query: 7 HKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRH-LSLKGAGSATGLR 65
HK K ++ KK + ++W+ + K+ + + R+ +K G A G +
Sbjct: 27 HKKKNPEVPVNFAEFSKKCS-ERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGK 85
Query: 66 SK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
K + +RP + F +F R K+ +P V+K LGE W +L EKQ Y
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK 145
Query: 123 ASEVKEAHFKAHPEWKWCSK-DKRKSSTGSGRGKLGSMDE 161
A+++KE + K ++K K D K R K+ DE
Sbjct: 146 AAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEDE 185
>UNIPROTKB|I3LMN8 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GeneTree:ENSGT00690000101940 GO:GO:0030238 PANTHER:PTHR10270:SF48
EMBL:FQ311950 Ensembl:ENSSSCT00000030781 Uniprot:I3LMN8
Length = 208
Score = 144 (55.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 56 KGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
+G+G +G +DR++RPMNAF+++S+ R KV +P N +SK LG W L E
Sbjct: 51 RGSGRESG---QDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAE 107
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKRK 146
K+ + E A ++ H +P +K+ + +RK
Sbjct: 108 KRPFFEEAQRLQAVHRDKYPGYKY--RPRRK 136
>UNIPROTKB|P36393 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
CTD:6736 HOVERGEN:HBG008712 PANTHER:PTHR10270:SF48 EMBL:U49860
EMBL:Z23070 EMBL:S79625 EMBL:Z26909 PIR:I47151 RefSeq:NP_999617.2
ProteinModelPortal:P36393 SMR:P36393 GeneID:407740 KEGG:ssc:407740
Uniprot:P36393
Length = 208
Score = 144 (55.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 56 KGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
+G+G +G +DR++RPMNAF+++S+ R KV +P N +SK LG W L E
Sbjct: 51 RGSGRESG---QDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAE 107
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKRK 146
K+ + E A ++ H +P +K+ + +RK
Sbjct: 108 KRPFFEEAQRLQAVHRDKYPGYKY--RPRRK 136
>UNIPROTKB|Q6F2E7 [details] [associations]
symbol:sox9 "Transcription factor Sox-9" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0014029
"neural crest formation" evidence=ISS] [GO:0019899 "enzyme binding"
evidence=ISS] [GO:0043049 "otic placode formation" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051216
"cartilage development" evidence=IEP] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0006351 GO:GO:0019899 GO:GO:0007506
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0051216 GO:GO:0043049 GO:GO:0014029 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 CTD:6662 EMBL:AC148478
EMBL:CR855424 RefSeq:NP_001016853.1 UniGene:Str.15584
ProteinModelPortal:Q6F2E7 SMR:Q6F2E7 STRING:Q6F2E7 GeneID:549607
KEGG:xtr:549607 Xenbase:XB-GENE-1034769 eggNOG:NOG295090
Uniprot:Q6F2E7
Length = 482
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 31/91 (34%), Positives = 56/91 (61%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
+SK ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGRGK 155
++ H K HP++K+ + +R+ S +G+ +
Sbjct: 160 RLRIQHKKDHPDYKY--QPRRRKSVKNGQSE 188
>FB|FBgn0005612 [details] [associations]
symbol:Sox14 "Sox box protein 14" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;IMP;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0016322 "neuron remodeling" evidence=IGI]
[GO:0048813 "dendrite morphogenesis" evidence=IGI] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007552 "metamorphosis" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 EMBL:AE013599 GO:GO:0005634
GO:GO:0043565 GO:GO:0016322 GO:GO:0006357 GO:GO:0006351
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0048813 GO:GO:0007552 eggNOG:NOG130659
GeneTree:ENSGT00690000101789 CTD:8403 EMBL:AJ252125 EMBL:X65667
PIR:S22935 RefSeq:NP_476894.1 RefSeq:NP_599117.1 UniGene:Dm.760
ProteinModelPortal:P40656 SMR:P40656 IntAct:P40656 MINT:MINT-791196
STRING:P40656 EnsemblMetazoa:FBtr0072157 EnsemblMetazoa:FBtr0072158
GeneID:37822 KEGG:dme:Dmel_CG3090 FlyBase:FBgn0005612
InParanoid:P40656 OMA:NDANLHS OrthoDB:EOG4ZGMVV PhylomeDB:P40656
GenomeRNAi:37822 NextBio:805561 Bgee:P40656 GermOnline:CG3090
Uniprot:P40656
Length = 669
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 53/190 (27%), Positives = 90/190 (47%)
Query: 62 TGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHE 121
T S I+RPMNAFM++S+ R K+ + P+ N +SK LG W L ++KQ Y
Sbjct: 179 TKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYII 238
Query: 122 LASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEM 181
A ++++ H +P +K+ + K+ S GS + + D E +D + NSL
Sbjct: 239 EAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKP---NQDADGCEA--RNDTTNNNNSLTT 293
Query: 182 VTSSNETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTT--PTVIVSKQSNIEMQ 239
+ + TT GR S ++ Q +S+ L N T+ P V +S ++
Sbjct: 294 LAINGTTTA-------GRKSKRSTSTCQSGSASKRLRNDSGDTSSKPKYEVKMESAEQLN 346
Query: 240 NASVAAANAE 249
+A + +A+
Sbjct: 347 SADIILPSAD 356
>ZFIN|ZDB-GENE-080725-1 [details] [associations]
symbol:sox18 "SRY-box containing gene 18"
species:7955 "Danio rerio" [GO:0001570 "vasculogenesis"
evidence=IGI] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-080725-1 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001570 InterPro:IPR021934
Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270
CTD:54345 EMBL:CR457456 IPI:IPI00632675 RefSeq:XP_001337702.1
UniGene:Dr.88332 Ensembl:ENSDART00000132992 GeneID:797246
KEGG:dre:797246 NextBio:20932931 Bgee:E7F9I2 Uniprot:E7F9I2
Length = 431
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 39/121 (32%), Positives = 64/121 (52%)
Query: 59 GSATGLRS-KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
GS+ G + RIRRPMNAFM+++K R ++ +P+ N +SK+LG+ W +L +K+
Sbjct: 82 GSSEGKSGGESRIRRPMNAFMVWAKDERKRLAIQNPDLHNAVLSKMLGQSWKALSTLDKR 141
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKR--KSSTGSGRGKL--GSMDEGTGEGFMPDDLE 173
+ E A ++ H + HP +K+ + K+ K G L G G G+ + P
Sbjct: 142 PFVEEAERLRLQHLQDHPNYKYRPRRKKQPKKMKRVEPGLLLQGLAHGGPGDAYSPHRHA 201
Query: 174 H 174
H
Sbjct: 202 H 202
>UNIPROTKB|F1PX33 [details] [associations]
symbol:TCF7L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000036 "regulation of stem cell maintenance"
evidence=IEA] [GO:0048319 "axial mesoderm morphogenesis"
evidence=IEA] [GO:0046022 "positive regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0008595 "anterior/posterior axis specification, embryo"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0043588 GO:GO:0016055
GO:GO:0003677 GO:GO:0008595 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0035019 GO:GO:0046022 GO:GO:0048319 GO:GO:2000036
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:TTVKDTR EMBL:AAEX03010938
Ensembl:ENSCAFT00000012532 Uniprot:F1PX33
Length = 584
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 43/168 (25%), Positives = 80/168 (47%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 339 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 398
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSN 186
++ H + +P W ++D G+ K ++ + ++ E +L + S
Sbjct: 399 RQLHSQLYPTWS--ARDNY------GKKKKRKREKQLSQTQSQQQVQEAEGAL--ASKSK 448
Query: 187 ETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQS 234
+ VQYL S S G + + + P P S+Q+
Sbjct: 449 KPCVQYLPPEKSCDSPASSHGSMLDSPATPSAALASPAAPAATHSEQA 496
>UNIPROTKB|Q4H2Q5 [details] [associations]
symbol:Ci-Tcf/Lef "Transcription factor protein"
species:7719 "Ciona intestinalis" [GO:0005667 "transcription factor
complex" evidence=IBA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IBA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=IBA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IBA] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IBA]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IBA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0043565 GO:GO:0006357 GO:GO:0005667 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0008013 GO:GO:0060070 HOVERGEN:HBG000419 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916 KO:K04491
EMBL:AB210717 RefSeq:NP_001071831.1 UniGene:Cin.1608
ProteinModelPortal:Q4H2Q5 SMR:Q4H2Q5 STRING:Q4H2Q5 GeneID:778773
KEGG:cin:778773 CTD:373203 InParanoid:Q4H2Q5 Uniprot:Q4H2Q5
Length = 351
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 66 SKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASE 125
S+ +++P+NAFM++ K RAKV +++ +++ILG W+SL EE+QKY+E+A +
Sbjct: 273 SRPYVKKPLNAFMLYMKEQRAKVVAECTLKESAAINQILGRKWHSLNREEQQKYYEMARK 332
Query: 126 VKEAHFKAHPEW 137
++ H + P W
Sbjct: 333 ERQLHQQMFPGW 344
>UNIPROTKB|Q870J1 [details] [associations]
symbol:Q870J1 "HMG-box protein STE11" species:4754
"Pneumocystis carinii" [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000750
EMBL:AY257481 ProteinModelPortal:Q870J1 Uniprot:Q870J1
Length = 501
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 32/98 (32%), Positives = 61/98 (62%)
Query: 56 KGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
K + S +G S I+RP+N+FM++ + ++ + P +++++S+I+GE W EE
Sbjct: 188 KKSPSRSG-SSSSGIKRPLNSFMLYRRDKQSSI----PTNNHQSISRIIGEMWKRETIEE 242
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
K++Y E+A +E H K +P++K+ + K+ ST SG+
Sbjct: 243 KERYAEMAQRERERHAKEYPDYKFLPRKKKDRST-SGK 279
>UNIPROTKB|F1NYW9 [details] [associations]
symbol:TCF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0021915 "neural tube development" evidence=IEA] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IEA] [GO:0033153 "T
cell receptor V(D)J recombination" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0046632 "alpha-beta T cell differentiation" evidence=IEA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA]
[GO:0048619 "embryonic hindgut morphogenesis" evidence=IEA]
[GO:0071353 "cellular response to interleukin-4" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0005634
GO:GO:0042981 GO:GO:0016055 GO:GO:0003700 GO:GO:0042127
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0071353 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 GeneTree:ENSGT00390000009964 EMBL:AADN02028324
EMBL:AADN02028325 EMBL:AADN02028326 EMBL:AADN02028327
EMBL:AADN02028328 IPI:IPI00581442 Ensembl:ENSGALT00000010476
OMA:RFPHPLM Uniprot:F1NYW9
Length = 386
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K I++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 250 KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 309
Query: 127 KEAHFKAHPEWKW---CSKDKRKS 147
++ H + +P W K KR+S
Sbjct: 310 RQLHMQLYPGWSARDNYGKKKRRS 333
>UNIPROTKB|A8WWH5 [details] [associations]
symbol:pop-1 "Protein pop-1" species:6238 "Caenorhabditis
briggsae" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008356 "asymmetric cell division"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 InterPro:IPR024940
Pfam:PF00505 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0016055 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0008356
PANTHER:PTHR10373 eggNOG:NOG252916 EMBL:HE600926 STRING:A8WWH5
EnsemblMetazoa:CBG04236 WormBase:CBG04236 HOGENOM:HOG000184838
Uniprot:A8WWH5
Length = 439
Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 51 RHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRT--VSKILGEWW 108
+H +G G ++ +D I++P+NAFM + K +R K+ + N ++ ++K LG+ W
Sbjct: 181 QHNERRGHGGGK-VKKEDHIKKPLNAFMWYMKENRPKLLEEVGNDQKQSAELNKELGKRW 239
Query: 109 YSLGPEEKQKYHELASEVKEAHFKAHPEW 137
+ L EE+QKY E+A + +E+H + +P+W
Sbjct: 240 HDLPKEEQQKYFEMAKKDRESHKEKYPQW 268
>UNIPROTKB|P36194 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0003677 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 HOVERGEN:HBG009000 EMBL:D14314 IPI:IPI00591130
PIR:I50254 UniGene:Gga.4513 ProteinModelPortal:P36194 SMR:P36194
STRING:P36194 PRIDE:P36194 Uniprot:P36194
Length = 201
Score = 141 (54.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 7 HKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRH-LSLKGAGSATGLR 65
HK K ++ KK + ++W+ + SK+ + + R+ +K G A G +
Sbjct: 27 HK-KNPEVPVNFAEFSKKCS-ERWKTMSSKEKAKFDEMAKADKVRYDREMKDYGPAKGGK 84
Query: 66 SK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
K + +RP + F +F R K+ +P V+K LGE W +L EKQ Y+
Sbjct: 85 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNK 144
Query: 123 ASEVKEAHFKAHPEWKWCSK-DKRK-SSTGSGRGKLGSMDEGTGEGFMPDD 171
A+++KE + K ++K K D K ++T + R K+ DE E +D
Sbjct: 145 AAKLKEKYEKDVADYKSKGKFDGAKGAATKAARKKVEEEDEEEEEDEEEED 195
>UNIPROTKB|E1BQW7 [details] [associations]
symbol:SOX30 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000981 "sequence-specific DNA binding RNA polymerase
II transcription factor activity" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031960 "response to
corticosteroid stimulus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043565 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000981 GO:GO:0031960
OMA:VPQLDIG GeneTree:ENSGT00670000098123 EMBL:AADN02028684
IPI:IPI00596095 Ensembl:ENSGALT00000005911 Uniprot:E1BQW7
Length = 548
Score = 155 (59.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 66 SKDR---IRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
SKD+ ++RPMNAFM++++ HR + + +PN +N +S LG W L E+KQ Y++
Sbjct: 128 SKDKTGHVKRPMNAFMVWARIHRPALAKANPNANNAEISVQLGLEWSKLTEEQKQPYYDE 187
Query: 123 ASEVKEAHFKAHPEWKWCSKD-KRK 146
A ++K+ H + P W + + KRK
Sbjct: 188 ARKIKQRHREEFPGWVYQPRPGKRK 212
>UNIPROTKB|P70062 [details] [associations]
symbol:tcf7l1-a "Transcription factor 7-like 1-A"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0007275 GO:GO:0005737 GO:GO:0016055 GO:GO:0043565
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 PDB:1G3J PDBsum:1G3J
HOVERGEN:HBG000419 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 KO:K04490 EMBL:X99308 RefSeq:NP_001081483.1
UniGene:Xl.1100 ProteinModelPortal:P70062 SMR:P70062 IntAct:P70062
MINT:MINT-4790980 GeneID:397863 KEGG:xla:397863 CTD:397863
Xenbase:XB-GENE-6252329 EvolutionaryTrace:P70062 Uniprot:P70062
Length = 554
Score = 155 (59.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K I++P+NAFM++ K RAKV +++ +++ILG W+SL EE+ KY+ELA +
Sbjct: 321 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELARKE 380
Query: 127 KEAHFKAHPEW 137
++ H + +P W
Sbjct: 381 RQLHSQLYPSW 391
>MGI|MGI:1202876 [details] [associations]
symbol:Tcf7l1 "transcription factor 7 like 1 (T cell
specific, HMG box)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=IPI] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IBA]
[GO:0022008 "neurogenesis" evidence=IBA] [GO:0035019 "somatic stem
cell maintenance" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IBA] [GO:0043588 "skin development" evidence=IGI]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IBA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046022 "positive regulation of
transcription from RNA polymerase II promoter during mitosis"
evidence=IDA] [GO:0048319 "axial mesoderm morphogenesis"
evidence=IMP] [GO:0048699 "generation of neurons" evidence=IBA]
[GO:0048863 "stem cell differentiation" evidence=IMP] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IBA]
[GO:2000036 "regulation of stem cell maintenance" evidence=IMP]
InterPro:IPR009071 InterPro:IPR024940 MGI:MGI:1202876 Pfam:PF00505
GO:GO:0045892 GO:GO:0043588 GO:GO:0007420 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0035019 GO:GO:0046022
GO:GO:0060070 GO:GO:0048699 GO:GO:0048319 GO:GO:2000036
HOVERGEN:HBG000419 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 eggNOG:NOG252916 KO:K04490 OrthoDB:EOG46MBJM CTD:83439
ChiTaRS:TCF7L1 EMBL:AJ223069 EMBL:AJ223233 EMBL:AF057691
IPI:IPI00135957 RefSeq:NP_001073290.1 RefSeq:NP_033358.2
UniGene:Mm.440067 ProteinModelPortal:Q9Z1J1 SMR:Q9Z1J1
IntAct:Q9Z1J1 STRING:Q9Z1J1 PhosphoSite:Q9Z1J1 PRIDE:Q9Z1J1
GeneID:21415 KEGG:mmu:21415 NextBio:300710 CleanEx:MM_TCF3
Genevestigator:Q9Z1J1 GermOnline:ENSMUSG00000055799 Uniprot:Q9Z1J1
Length = 584
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 41/170 (24%), Positives = 83/170 (48%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 339 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 398
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSN 186
++ H + +P W ++D G+ K ++ + ++ E +L + S
Sbjct: 399 RQLHAQLYPTWS--ARDNY------GKKKKRKREKQLSQTQSQQQIQEAEGAL--ASKSK 448
Query: 187 ETTVQYLL--HPTGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQS 234
+ +QYL P ++ + + P + + + P P S+Q+
Sbjct: 449 KPCIQYLPPEKPCDSPASSHGSALDSPATPSAA--LASPAAPAATHSEQA 496
>UNIPROTKB|Q9HCS4 [details] [associations]
symbol:TCF7L1 "Transcription factor 7-like 1" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008595 "anterior/posterior axis specification,
embryo" evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046022 "positive regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IEA]
[GO:0048319 "axial mesoderm morphogenesis" evidence=IEA]
[GO:2000036 "regulation of stem cell maintenance" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IBA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IBA;NAS]
[GO:0006325 "chromatin organization" evidence=NAS] [GO:0030111
"regulation of Wnt receptor signaling pathway" evidence=NAS]
[GO:0003682 "chromatin binding" evidence=IBA] [GO:0005667
"transcription factor complex" evidence=IBA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=IBA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IBA] [GO:0022008
"neurogenesis" evidence=IBA] [GO:0043565 "sequence-specific DNA
binding" evidence=IBA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IBA] [GO:0048699 "generation of neurons"
evidence=IBA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IBA] InterPro:IPR009071 InterPro:IPR024940
Pfam:PF00505 GO:GO:0045892 GO:GO:0043588 GO:GO:0007420
GO:GO:0030111 GO:GO:0008595 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0035019 GO:GO:0008013 GO:GO:0046022
GO:GO:0060070 GO:GO:0006325 GO:GO:0048699 GO:GO:0048319
GO:GO:2000036 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
EMBL:AC093162 KO:K04490 OMA:TTVKDTR OrthoDB:EOG46MBJM EMBL:AB031046
EMBL:AC011236 EMBL:BC058894 EMBL:X62870 IPI:IPI00010396 PIR:S22806
RefSeq:NP_112573.1 UniGene:Hs.516297 ProteinModelPortal:Q9HCS4
SMR:Q9HCS4 STRING:Q9HCS4 PhosphoSite:Q9HCS4 DMDM:29337134
PRIDE:Q9HCS4 Ensembl:ENST00000282111 GeneID:83439 KEGG:hsa:83439
UCSC:uc002soy.3 CTD:83439 GeneCards:GC02P085272 HGNC:HGNC:11640
MIM:604652 neXtProt:NX_Q9HCS4 PharmGKB:PA36393 InParanoid:Q9HCS4
ChiTaRS:TCF7L1 GenomeRNAi:83439 NextBio:72314 ArrayExpress:Q9HCS4
Bgee:Q9HCS4 CleanEx:HS_TCF3 CleanEx:HS_TCF7L1 Genevestigator:Q9HCS4
GermOnline:ENSG00000152284 Uniprot:Q9HCS4
Length = 588
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 43/168 (25%), Positives = 80/168 (47%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 343 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 402
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLEMVTSSN 186
++ H + +P W ++D G+ K ++ + ++ E +L + S
Sbjct: 403 RQLHSQLYPTWS--ARDNY------GKKKKRKREKQLSQTQSQQQVQEAEGAL--ASKSK 452
Query: 187 ETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTTPTVIVSKQS 234
+ VQYL S S G + + + P P S+Q+
Sbjct: 453 KPCVQYLPPEKPCDSPASSHGSMLDSPATPSAALASPAAPAATHSEQA 500
>WB|WBGene00004077 [details] [associations]
symbol:pop-1 species:6239 "Caenorhabditis elegans"
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0010085
"polarity specification of proximal/distal axis" evidence=IGI]
[GO:0042659 "regulation of cell fate specification" evidence=IGI]
[GO:0009786 "regulation of asymmetric cell division" evidence=IGI]
[GO:0007500 "mesodermal cell fate determination" evidence=IGI;IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043282 "pharyngeal muscle development"
evidence=IGI;IMP] [GO:0009880 "embryonic pattern specification"
evidence=IGI;IMP] [GO:0040026 "positive regulation of vulval
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0035035 "histone acetyltransferase binding"
evidence=IPI] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IDA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0009792 GO:GO:0002009
GO:GO:0005737 GO:GO:0006915 GO:GO:0045892 GO:GO:0007052
GO:GO:0016246 GO:GO:0045944 GO:GO:0003700 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0040035 GO:GO:0009786 GO:GO:0009880 GO:GO:0008356
GO:GO:0060070 GO:GO:0040027 GO:GO:0000977 GO:GO:0040026
GO:GO:0042659 GO:GO:0007500 GO:GO:0001703 GO:GO:0043282
PANTHER:PTHR10373 GO:GO:0010085 eggNOG:NOG252916
GeneTree:ENSGT00390000009964 HOGENOM:HOG000184838 EMBL:U37532
EMBL:FO081765 PIR:A57667 PIR:C87732 PIR:T32931 RefSeq:NP_491053.4
UniGene:Cel.19670 PDB:3C2G PDBsum:3C2G ProteinModelPortal:Q10666
SMR:Q10666 DIP:DIP-25683N IntAct:Q10666 MINT:MINT-214603
STRING:Q10666 PaxDb:Q10666 EnsemblMetazoa:W10C8.2 GeneID:171849
KEGG:cel:CELE_W10C8.2 UCSC:W10C8.2 CTD:171849 WormBase:W10C8.2
InParanoid:Q10666 OMA:QQLADDK EvolutionaryTrace:Q10666
NextBio:872963 Uniprot:Q10666
Length = 438
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 56 KGAGSATGLRSKDRIRRPMNAFMIFSKRHR-AKVHQIHPNQ-DNRTVSKILGEWWYSLGP 113
+G G A + D +++P+NAFM F K +R A + +I N+ + ++K LG+ W+ L
Sbjct: 181 QGGGKA---KKDDHVKKPLNAFMWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSK 237
Query: 114 EEKQKYHELASEVKEAHFKAHPEW 137
EE+ KY E+A + KE H + +PEW
Sbjct: 238 EEQAKYFEMAKKDKETHKERYPEW 261
>UNIPROTKB|Q10666 [details] [associations]
symbol:pop-1 "Protein pop-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0008356
"asymmetric cell division" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IBA;TAS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IBA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IBA] [GO:0005667 "transcription factor complex"
evidence=IBA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0009792 GO:GO:0002009 GO:GO:0005737 GO:GO:0006915
GO:GO:0045892 GO:GO:0007052 GO:GO:0016246 GO:GO:0045944
GO:GO:0003700 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0040035 GO:GO:0009786
GO:GO:0009880 GO:GO:0008356 GO:GO:0060070 GO:GO:0040027
GO:GO:0000977 GO:GO:0040026 GO:GO:0042659 GO:GO:0007500
GO:GO:0001703 GO:GO:0043282 PANTHER:PTHR10373 GO:GO:0010085
eggNOG:NOG252916 GeneTree:ENSGT00390000009964 HOGENOM:HOG000184838
EMBL:U37532 EMBL:FO081765 PIR:A57667 PIR:C87732 PIR:T32931
RefSeq:NP_491053.4 UniGene:Cel.19670 PDB:3C2G PDBsum:3C2G
ProteinModelPortal:Q10666 SMR:Q10666 DIP:DIP-25683N IntAct:Q10666
MINT:MINT-214603 STRING:Q10666 PaxDb:Q10666 EnsemblMetazoa:W10C8.2
GeneID:171849 KEGG:cel:CELE_W10C8.2 UCSC:W10C8.2 CTD:171849
WormBase:W10C8.2 InParanoid:Q10666 OMA:QQLADDK
EvolutionaryTrace:Q10666 NextBio:872963 Uniprot:Q10666
Length = 438
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 56 KGAGSATGLRSKDRIRRPMNAFMIFSKRHR-AKVHQIHPNQ-DNRTVSKILGEWWYSLGP 113
+G G A + D +++P+NAFM F K +R A + +I N+ + ++K LG+ W+ L
Sbjct: 181 QGGGKA---KKDDHVKKPLNAFMWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSK 237
Query: 114 EEKQKYHELASEVKEAHFKAHPEW 137
EE+ KY E+A + KE H + +PEW
Sbjct: 238 EEQAKYFEMAKKDKETHKERYPEW 261
>UNIPROTKB|F1MJS2 [details] [associations]
symbol:TCF7L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:TTVKDTR EMBL:DAAA02031141
EMBL:DAAA02031142 EMBL:DAAA02031143 IPI:IPI00999462
Ensembl:ENSBTAT00000013336 ArrayExpress:F1MJS2 Uniprot:F1MJS2
Length = 442
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 196 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 255
Query: 127 KEAHFKAHPEWK----WCSKDKRK 146
++ H + +P W + K KRK
Sbjct: 256 RQLHSQLYPTWSARDNYGKKKKRK 279
>UNIPROTKB|F1SVA7 [details] [associations]
symbol:TCF7L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000036 "regulation of stem cell maintenance"
evidence=IEA] [GO:0048319 "axial mesoderm morphogenesis"
evidence=IEA] [GO:0046022 "positive regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0008595 "anterior/posterior axis specification, embryo"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0043588 GO:GO:0016055
GO:GO:0003677 GO:GO:0008595 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0035019 GO:GO:0046022 GO:GO:0048319 GO:GO:2000036
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:TTVKDTR EMBL:CU951451
Ensembl:ENSSSCT00000009025 Uniprot:F1SVA7
Length = 442
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K +++P+NAFM++ K RAKV +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 197 KPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 256
Query: 127 KEAHFKAHPEWK----WCSKDKRK 146
++ H + +P W + K KRK
Sbjct: 257 RQLHSQLYPTWSARDNYGKKKKRK 280
>FB|FBgn0024288 [details] [associations]
symbol:Sox100B "Sox100B" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=ISS] [GO:0008584 "male gonad development"
evidence=IMP;IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0008584
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 EMBL:AJ251580
ProteinModelPortal:Q9VA16 SMR:Q9VA16 STRING:Q9VA16
FlyBase:FBgn0024288 InParanoid:Q9VA16 OrthoDB:EOG4Q83CZ Bgee:Q9VA16
Uniprot:Q9VA16
Length = 529
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 28/91 (30%), Positives = 56/91 (61%)
Query: 55 LKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPE 114
++ + A R K+ I+RPMNAFM++++ R + + +P+ N +SK LG+ W +L
Sbjct: 62 VQASAKAPSDRKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDS 121
Query: 115 EKQKYHELASEVKEAHFKAHPEWKWCSKDKR 145
+K+ + E A +++ H + HP++K+ + K+
Sbjct: 122 DKKPFMEFAEKLRMTHKQEHPDYKYQPRRKK 152
>UNIPROTKB|O94993 [details] [associations]
symbol:SOX30 "Transcription factor SOX-30" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0031960 "response to corticosteroid stimulus" evidence=IEP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0006355 GO:GO:0043565 GO:GO:0007283 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0000981 GO:GO:0031960 KO:K09271 EMBL:AB022083 EMBL:AB022441
EMBL:BC033492 IPI:IPI00016680 IPI:IPI00220989 RefSeq:NP_008948.1
RefSeq:NP_848511.1 UniGene:Hs.529462 ProteinModelPortal:O94993
SMR:O94993 IntAct:O94993 MINT:MINT-1439929 STRING:O94993
PhosphoSite:O94993 PaxDb:O94993 PRIDE:O94993 DNASU:11063
Ensembl:ENST00000265007 Ensembl:ENST00000311371 GeneID:11063
KEGG:hsa:11063 UCSC:uc003lxb.1 UCSC:uc003lxc.1 CTD:11063
GeneCards:GC05M157053 H-InvDB:HIX0005360 HGNC:HGNC:30635
HPA:CAB009382 HPA:HPA006159 MIM:606698 neXtProt:NX_O94993
PharmGKB:PA134876614 eggNOG:NOG329829 HOGENOM:HOG000070158
HOVERGEN:HBG057980 InParanoid:O94993 OMA:VPQLDIG OrthoDB:EOG4CVG6C
PhylomeDB:O94993 ChiTaRS:SOX30 GenomeRNAi:11063 NextBio:42041
ArrayExpress:O94993 Bgee:O94993 CleanEx:HS_SOX30
Genevestigator:O94993 GermOnline:ENSG00000039600 Uniprot:O94993
Length = 753
Score = 152 (58.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 66 SKDR---IRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
SKDR ++RPMNAFM++++ HR + + +P +N +S LG W L E+K+ Y++
Sbjct: 330 SKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDE 389
Query: 123 ASEVKEAHFKAHPEWKWCSKD-KRK 146
A ++KE H + P W + + KRK
Sbjct: 390 AQKIKEKHREEFPGWVYQPRPGKRK 414
Score = 47 (21.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 175 FENSLEMVTSSNETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTT-PTVIVSKQ 233
F + + + S+N TTV PT ++ Q PI+ +G PT V
Sbjct: 424 FSGTTQNIISTNPTTVYPYRSPT---YSVVIPSLQNPIT-HPVGETSPAIQLPTPAVQSP 479
Query: 234 SNIEMQNASVAAA 246
S + + SV++A
Sbjct: 480 SPVTLFQPSVSSA 492
Score = 38 (18.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 212 ISSESLGNVKQPTTPTVIVSKQSNIEMQNASVAAA 246
+ SE+ VKQPT P + S +N +AS A A
Sbjct: 524 LHSEATHTVKQPT-PVSLES--ANRISSSASTAHA 555
>UNIPROTKB|F1RQF2 [details] [associations]
symbol:SOX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0031960 "response to corticosteroid stimulus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0043565 GO:GO:0007283 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000981 GO:GO:0031960
OMA:VPQLDIG GeneTree:ENSGT00670000098123 EMBL:CU570950
Ensembl:ENSSSCT00000018564 Uniprot:F1RQF2
Length = 764
Score = 152 (58.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 66 SKDR---IRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
SKDR ++RPMNAFM++++ HR + + +P +N +S LG W L E+K+ Y++
Sbjct: 341 SKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDE 400
Query: 123 ASEVKEAHFKAHPEWKWCSKD-KRK 146
A ++KE H + P W + + KRK
Sbjct: 401 AQKIKEKHREEFPGWVYQPRPGKRK 425
Score = 47 (21.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 175 FENSLEMVTSSNETTVQYLLHPTGR--LSNIYSTGFQIPISSESLGNVKQPTTPTVIVSK 232
F + + + S+N TT+ PT + ++ +T P+ E+ ++ PT P V +
Sbjct: 435 FSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNT-ITHPVEGEAPPAIQLPT-PAV--QR 490
Query: 233 QSNIEMQNASVAAA 246
S I + SV+ A
Sbjct: 491 PSPITLFQPSVSTA 504
>UNIPROTKB|Q6GL68 [details] [associations]
symbol:tcf7l1 "Transcription factor 7-like 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin binding"
evidence=IBA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IBA] [GO:0005667
"transcription factor complex" evidence=ISS;IBA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IBA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IBA] [GO:0007420 "brain development"
evidence=IBA] [GO:0008013 "beta-catenin binding" evidence=IBA]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IBA]
[GO:0022008 "neurogenesis" evidence=IBA] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IBA]
[GO:0048699 "generation of neurons" evidence=IBA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IBA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0007420
GO:GO:0043565 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0008134
GO:GO:0008013 GO:GO:0060070 GO:GO:0048699 HOGENOM:HOG000116032
HOVERGEN:HBG000419 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 eggNOG:NOG252916 GeneTree:ENSGT00390000009964
KO:K04490 OrthoDB:EOG46MBJM CTD:83439 EMBL:BC074638
RefSeq:NP_001005640.1 UniGene:Str.11534 ProteinModelPortal:Q6GL68
SMR:Q6GL68 STRING:Q6GL68 Ensembl:ENSXETT00000045614 GeneID:448107
KEGG:xtr:448107 Xenbase:XB-GENE-1031985 InParanoid:Q6GL68
OMA:VNESENH Bgee:Q6GL68 Uniprot:Q6GL68
Length = 553
Score = 154 (59.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K I++P+NAFM++ K RAKV +++ +++ILG W+SL EE+ KY+ELA +
Sbjct: 321 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELARKE 380
Query: 127 KEAHFKAHPEW 137
++ H + +P W
Sbjct: 381 RQLHSQLYPTW 391
>UNIPROTKB|Q32L31 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9913
"Bos taurus" [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0008301 "DNA binding, bending" evidence=IDA]
[GO:0006310 "DNA recombination" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006310
GO:GO:0003690 Pfam:PF09011 HSSP:P48431 HOGENOM:HOG000197861
GeneTree:ENSGT00560000076717 HOVERGEN:HBG009000 OrthoDB:EOG4TTGK2
eggNOG:NOG320947 EMBL:BC109793 IPI:IPI00883385
RefSeq:NP_001069753.2 RefSeq:NP_001106728.1 UniGene:Bt.62966
ProteinModelPortal:Q32L31 SMR:Q32L31 Ensembl:ENSBTAT00000005793
Ensembl:ENSBTAT00000006785 GeneID:613729 KEGG:bta:613729 CTD:3149
InParanoid:Q32L31 KO:K11296 OMA:DNEKQPY NextBio:20898733
ArrayExpress:Q32L31 Uniprot:Q32L31
Length = 200
Score = 140 (54.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 7 HKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRH-LSLKGAGSATGLR 65
HK K ++ KK + ++W+ + K+ + + R+ +K G A G +
Sbjct: 27 HKKKNPEVPVNFAEFSKKCS-ERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGK 85
Query: 66 SK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
K + +RP + F +F R K+ +P V+K LGE W +L EKQ Y
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINK 145
Query: 123 ASEVKEAHFKAHPEWKWCSK-DKRKSSTGSGRGKLGSMDE 161
A+++KE + K ++K K D K + R K+ DE
Sbjct: 146 AAKLKEKYEKDVADYKSKGKFDGAKGAAKVARKKVEEEDE 185
>UNIPROTKB|Q8AXQ4 [details] [associations]
symbol:sox12 "Transcription factor Sox-12" species:8355
"Xenopus laevis" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48431 KO:K09268 CTD:6666 EMBL:AB086020 EMBL:BC169671
EMBL:BC169697 RefSeq:NP_001079045.1 UniGene:Xl.21610
ProteinModelPortal:Q8AXQ4 GeneID:373574 KEGG:xla:373574
Xenbase:XB-GENE-864958 Uniprot:Q8AXQ4
Length = 244
Score = 146 (56.5 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 31/115 (26%), Positives = 57/115 (49%)
Query: 42 ESQRRGYCSRHLSLKGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVS 101
+++ G C + + G + S I+RPMNAFM++S+ R K+ + PN N +S
Sbjct: 3 QNKTTGSCPKPTEVAPGGPSWCKTSNGHIKRPMNAFMVWSQIERRKLMSLCPNMHNADIS 62
Query: 102 KILGEWWYSLGPEEKQKYHELASEVKEAHFKAHPEWKWCSKDKRKSSTGSGRGKL 156
+ LG+ W L +K Y A ++ H +P +K+ + + ++ R +L
Sbjct: 63 RSLGQRWKLLQDTDKIPYVREAERLRLKHMADYPNYKYRPRRRSRTQESKTRARL 117
>UNIPROTKB|F1RQ19 [details] [associations]
symbol:LOC100517745 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 KO:K11296 OMA:DNEKQPY
EMBL:CU929821 RefSeq:XP_003135516.1 UniGene:Ssc.27311
Ensembl:ENSSSCT00000013934 GeneID:100517745 KEGG:ssc:100517745
Uniprot:F1RQ19
Length = 202
Score = 140 (54.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 48/179 (26%), Positives = 77/179 (43%)
Query: 7 HKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRH-LSLKGAGSATGLR 65
HK K ++ KK + ++W+ + K+ + + R+ +K G A G +
Sbjct: 27 HKKKNPEVPVNFAEFSKKCS-ERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGK 85
Query: 66 SK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
K + +RP + F +F R K+ +P V+K LGE W +L EKQ Y
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINK 145
Query: 123 ASEVKEAHFKAHPEWKWCSK-DKRKSSTGSGRGKLGSMDEGTGEGFMPDDLEHFENSLE 180
A+++KE + K ++K K D K R K+ DE + DD E E E
Sbjct: 146 AAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEDDEDEDDD--DDDEEEEEEEDE 202
>ZFIN|ZDB-GENE-980605-30 [details] [associations]
symbol:tcf7l1a "transcription factor 7-like 1a
(T-cell specific, HMG-box)" species:7955 "Danio rerio" [GO:0016055
"Wnt receptor signaling pathway" evidence=IEA] [GO:0021903
"rostrocaudal neural tube patterning" evidence=IMP] [GO:0030901
"midbrain development" evidence=IMP] [GO:0010456 "cell
proliferation in dorsal spinal cord" evidence=IGI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IBA]
[GO:0043565 "sequence-specific DNA binding" evidence=IBA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IBA] [GO:0008013 "beta-catenin binding"
evidence=IBA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IBA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IBA] [GO:0003682 "chromatin
binding" evidence=IBA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IBA] [GO:0005667 "transcription factor
complex" evidence=IBA] [GO:0048596 "embryonic camera-type eye
morphogenesis" evidence=IGI] [GO:0060323 "head morphogenesis"
evidence=IMP] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0048699 "generation of neurons" evidence=IGI] [GO:0008284
"positive regulation of cell proliferation" evidence=IGI]
[GO:0021513 "spinal cord dorsal/ventral patterning" evidence=IGI]
[GO:0030900 "forebrain development" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 ZFIN:ZDB-GENE-980605-30
GO:GO:0008284 GO:GO:0043565 GO:GO:0030900 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0030901 GO:GO:0008013 GO:GO:0030178
GO:GO:0060070 GO:GO:0021903 GO:GO:0048596 GO:GO:0048699
GO:GO:0060323 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
GeneTree:ENSGT00390000009964 EMBL:AF097410 EMBL:BC053135
IPI:IPI00490974 RefSeq:NP_571344.1 UniGene:Dr.79155
ProteinModelPortal:Q9YHE8 SMR:Q9YHE8 STRING:Q9YHE8
Ensembl:ENSDART00000099262 GeneID:30523 KEGG:dre:30523 CTD:30523
InParanoid:Q9YHE8 KO:K04490 OMA:TTVKDTR OrthoDB:EOG46MBJM
NextBio:20806907 ArrayExpress:Q9YHE8 Bgee:Q9YHE8 GO:GO:0010456
Uniprot:Q9YHE8
Length = 560
Score = 153 (58.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K I++P+NAFM++ K RAKV +++ +++ILG W+SL EE+ KY+ELA +
Sbjct: 326 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELARKE 385
Query: 127 KEAHFKAHPEW 137
++ H + +P W
Sbjct: 386 RQLHSQLYPGW 396
>UNIPROTKB|Q5I921 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GeneTree:ENSGT00690000101940 GO:GO:0030238 CTD:6736
HOVERGEN:HBG008712 KO:K09266 OMA:QSYASAM PANTHER:PTHR10270:SF48
EMBL:FP565153 EMBL:AY842532 EMBL:AY842533 EMBL:AY842535
EMBL:GU991615 EMBL:GU143100 EMBL:GU143101 EMBL:GU143102
EMBL:GU143104 EMBL:GU143105 EMBL:GU143106 EMBL:GU143107
EMBL:GU143108 EMBL:GU143123 EMBL:GU143124 EMBL:GU143127
EMBL:GU143128 EMBL:GU143129 EMBL:GU143130 EMBL:GU143131
EMBL:GU143132 EMBL:GU143136 EMBL:GU143137 EMBL:GU143138
EMBL:GU143139 EMBL:GU143143 EMBL:GU143147 EMBL:GU143148
EMBL:GU143152 EMBL:GU143153 EMBL:GU143154 EMBL:GU143155
EMBL:GU143156 EMBL:GU143157 EMBL:GU143158 EMBL:GU143159
EMBL:GU143160 EMBL:GU143161 EMBL:GU143164 EMBL:GU143165
EMBL:GU143168 EMBL:GU143169 EMBL:GU143172 EMBL:GU143173
EMBL:GU143178 EMBL:GU143186 EMBL:GU143187 EMBL:GU143188
EMBL:GU143189 EMBL:GU143190 EMBL:GU143191 EMBL:GU143196
EMBL:GU143198 EMBL:GU143199 EMBL:GU143200 EMBL:GU143202
EMBL:GU143204 EMBL:GU143205 EMBL:GU143206 EMBL:GU143207
EMBL:GU143210 EMBL:GU143211 EMBL:GU143212 EMBL:GU143213
EMBL:GU143220 EMBL:GU143221 EMBL:GU143223 EMBL:GU143224
EMBL:GU143229 EMBL:GU143230 EMBL:GU143232 EMBL:GU143233
EMBL:GU143234 EMBL:GU143235 EMBL:GU143236 EMBL:GU143237
EMBL:GU143241 EMBL:GU143242 EMBL:GU143243 EMBL:GU143244
EMBL:GU143246 EMBL:GU143249 RefSeq:XP_003360585.1 SMR:Q5I921
Ensembl:ENSSSCT00000027478 GeneID:100625818 KEGG:ssc:100625818
Uniprot:Q5I921
Length = 236
Score = 144 (55.7 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 56 KGAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEE 115
+G+G +G +DR++RPMNAF+++S+ R KV +P N +SK LG W L E
Sbjct: 51 RGSGRESG---QDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAE 107
Query: 116 KQKYHELASEVKEAHFKAHPEWKWCSKDKRK 146
K+ + E A ++ H +P +K+ + +RK
Sbjct: 108 KRPFFEEAQRLQAVHRDKYPGYKY--RPRRK 136
>UNIPROTKB|E7EQU1 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 EMBL:AF003626 HGNC:HGNC:5004 IPI:IPI00640781
ProteinModelPortal:E7EQU1 SMR:E7EQU1 PRIDE:E7EQU1
Ensembl:ENST00000455596 ArrayExpress:E7EQU1 Bgee:E7EQU1
Uniprot:E7EQU1
Length = 193
Score = 137 (53.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 43/160 (26%), Positives = 71/160 (44%)
Query: 7 HKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRH-LSLKGAGSATGLR 65
HK K ++ KK + ++W+ + K+ + + R+ +K G A G +
Sbjct: 27 HKKKNPEVPVNFAEFSKKCS-ERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGK 85
Query: 66 SK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
K + +RP + F +F R K+ +P V+K LGE W +L EKQ Y
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK 145
Query: 123 ASEVKEAHFKAHPEWKWCSK-DKRKSSTGSGRGKLGSMDE 161
A+++KE + K ++K K D K R K+ DE
Sbjct: 146 AAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEDE 185
>UNIPROTKB|J9NVS3 [details] [associations]
symbol:HMGB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 OMA:DNEKQPY
EMBL:AAEX03027044 EMBL:AAEX03027045 Ensembl:ENSCAFT00000045229
Uniprot:J9NVS3
Length = 219
Score = 142 (55.0 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 7 HKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRH-LSLKGAGSATGLR 65
HK K ++ KK + ++W+ + K+ + + R+ +K G A G +
Sbjct: 45 HKKKNPEVPVNFAEFSKKCS-ERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGK 103
Query: 66 SK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
K + +RP + F +F R K+ +P V+K LGE W +L EKQ Y+
Sbjct: 104 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNK 163
Query: 123 ASEVKEAHFKAHPEWKWCSK-DKRKSSTGSGRGKLGSMDE 161
A+++KE + K ++K K D K R K+ DE
Sbjct: 164 AAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEDE 203
>UNIPROTKB|Q9XT60 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9615
"Canis lupus familiaris" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0016607 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GO:GO:0030238 HOVERGEN:HBG008712 PANTHER:PTHR10270:SF48
EMBL:AF107021 ProteinModelPortal:Q9XT60 SMR:Q9XT60 Uniprot:Q9XT60
Length = 220
Score = 142 (55.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 31/92 (33%), Positives = 54/92 (58%)
Query: 57 GAGSATGLRSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEK 116
G G +G ++R+RRPMNAF+++S+ R K+ +P N +SK LG W L EK
Sbjct: 43 GNGRDSG---RNRVRRPMNAFLVWSRDQRRKMALENPQMQNSEISKQLGYQWKMLTEAEK 99
Query: 117 QKYHELASEVKEAHFKAHPEWKWCSKDKRKSS 148
+ E A ++ H + +P++K+ + +RK++
Sbjct: 100 WPFFEEAQRLQAMHREKYPDYKY--RPRRKAT 129
>RGD|1586382 [details] [associations]
symbol:Sox30 "SRY (sex determining region Y)-box 30"
species:10116 "Rattus norvegicus" [GO:0000981 "sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0031960 "response to corticosteroid
stimulus" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1586382
GO:GO:0043565 GO:GO:0007283 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000981 GO:GO:0031960
GeneTree:ENSGT00670000098123 IPI:IPI00930917
Ensembl:ENSRNOT00000007978 Uniprot:F1M453
Length = 627
Score = 152 (58.6 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 66 SKDR---IRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
SKDR ++RPMNAFM++++ HR + + +P +N +S LG W L E+K+ Y++
Sbjct: 204 SKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDE 263
Query: 123 ASEVKEAHFKAHPEWKWCSKD-KRK 146
A ++KE H + P W + + KRK
Sbjct: 264 AQKIKEKHREEFPGWVYQPRPGKRK 288
Score = 42 (19.8 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 175 FENSLEMVTSSNETTVQYLLHPTGRLSNIYSTGFQIPISSESLGNVKQPTT-PTVIVSKQ 233
F + + + S+N TT+ PT ++ G Q I+ +G PT V +
Sbjct: 298 FSGTTQNIISTNPTTIYPYRSPT---YSVVIPGLQNTIT-HPVGEAPPAIQLPTPAVQRP 353
Query: 234 SNIEMQNASVAA 245
S I + SV++
Sbjct: 354 SPITLFQPSVSS 365
>UNIPROTKB|B7ZR65 [details] [associations]
symbol:sox9-a "Transcription factor Sox-9-A" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0014029 "neural crest formation" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0043049 "otic
placode formation" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0051216 "cartilage development"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0007506 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0051216 GO:GO:0043049 GO:GO:0014029
InterPro:IPR022151 Pfam:PF12444 EMBL:AY035397 EMBL:BC170058
EMBL:BC170060 RefSeq:NP_001084276.1 UniGene:Xl.1690 GeneID:399405
KEGG:xla:399405 CTD:399405 Xenbase:XB-GENE-6253910 Uniprot:B7ZR65
Length = 477
Score = 153 (58.9 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 30/89 (33%), Positives = 55/89 (61%)
Query: 65 RSKDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELAS 124
++K ++RPMNAFM++++ R K+ +P+ N +SK LG+ W L EK+ + E A
Sbjct: 100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAE 159
Query: 125 EVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
++ H K HP++K+ + +R+ S +G+
Sbjct: 160 RLRVQHKKDHPDYKY--QPRRRKSVKNGQ 186
Score = 37 (18.1 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 230 VSKQSNIEMQNASVAAANAELMQQADKNKDSEQQ 263
+SKQ + Q S++ N+E Q + +Q
Sbjct: 335 MSKQQQQQPQQHSLSTLNSEQSQSQQRTHIKTEQ 368
>RGD|1564407 [details] [associations]
symbol:Hmgb3 "high mobility group box 3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0045578 "negative regulation of B
cell differentiation" evidence=ISO] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=ISO]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
RGD:1564407 GO:GO:0005634 GO:GO:0003677 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 HOGENOM:HOG000197861 GeneTree:ENSGT00560000076717
HOVERGEN:HBG009000 OrthoDB:EOG4TTGK2 CTD:3149 KO:K11296 OMA:DNEKQPY
EMBL:BC158739 EMBL:CH474187 IPI:IPI00955625 RefSeq:NP_001166812.1
RefSeq:XP_003751731.1 UniGene:Rn.203482 SMR:B0BN99 STRING:B0BN99
Ensembl:ENSRNOT00000015044 GeneID:100912369 GeneID:305373
KEGG:rno:100912369 KEGG:rno:305373 NextBio:654455
Genevestigator:B0BN99 Uniprot:B0BN99
Length = 200
Score = 138 (53.6 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 7 HKYKKGDIVTTPTGIRKKFNGKQWRRLCSKDGCSKESQRRGYCSRH-LSLKGAGSATGLR 65
HK K ++ KK + ++W+ + SK+ + + R+ +K G A G +
Sbjct: 27 HKKKNPEVPVNFAEFSKKCS-ERWKTMSSKEKSKFDEMAKADKVRYDREMKDYGPAKGGK 85
Query: 66 SK---DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
K + +RP + F +F R K+ +P V+K LGE W +L EKQ Y
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTK 145
Query: 123 ASEVKEAHFKAHPEWKWCSKDKRKSSTGSGR 153
A+++KE + K ++K SK K + G +
Sbjct: 146 AAKLKEKYEKDVADYK--SKGKFDGAKGPAK 174
>ZFIN|ZDB-GENE-050222-4 [details] [associations]
symbol:tcf7 "transcription factor 7 (T-cell specific,
HMG-box)" species:7955 "Danio rerio" [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0021513 "spinal cord
dorsal/ventral patterning" evidence=IMP] [GO:0033339 "pectoral fin
development" evidence=IMP] [GO:0033333 "fin development"
evidence=IMP] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
ZFIN:ZDB-GENE-050222-4 GO:GO:0016055 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0033339
HOVERGEN:HBG000419 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 GO:GO:0021513 EMBL:AY825025 IPI:IPI00896294
UniGene:Dr.134827 ProteinModelPortal:Q5PU94 SMR:Q5PU94
STRING:Q5PU94 Uniprot:Q5PU94
Length = 355
Score = 148 (57.2 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 32/100 (32%), Positives = 57/100 (57%)
Query: 67 KDRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHELASEV 126
K I++P+NAFM++ K R +V +++ +++ILG W++L EE+ KY+ELA +
Sbjct: 234 KPVIKKPLNAFMLYMKEMRTEVIAECTLKESAAINQILGRRWHALTREEQAKYYELARKE 293
Query: 127 KEAHFKAHPEWKWCSKDKRKSSTGSG--RGKLGSMDEGTG 164
++ H + +P W ++D S+ G R + D TG
Sbjct: 294 RQLHMQLYPSWS--ARDNYVSALGKKKRRKRDKQQDSSTG 331
>DICTYBASE|DDB_G0270260 [details] [associations]
symbol:nhp6 "HMG1/2 (high mobility group)
box-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR009071 dictyBase:DDB_G0270260 Pfam:PF00505
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
eggNOG:COG5648 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0000790 GO:GO:0006325 HSSP:P63159
RefSeq:XP_646657.1 ProteinModelPortal:Q55C24 STRING:Q55C24
EnsemblProtists:DDB0216420 GeneID:8617629 KEGG:ddi:DDB_G0270260
OMA:ERVKNAN Uniprot:Q55C24
Length = 141
Score = 128 (50.1 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 56 KGAGSATGLRSKDRI--RRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGP 113
K G T + KD RR ++ F+ FSK HR+ + HPN + +LG+ W +
Sbjct: 37 KKEGKKTKKKPKDENAPRRYLSPFIFFSKDHRSVIKNSHPNCSFGEIGSLLGQEWAKISA 96
Query: 114 EEKQKYHELASEVK---EAHFKAHPEWKWCSKDKRKSSTGS 151
E+K+KY +LA+E K E K + E K ++ + +SS+ S
Sbjct: 97 EDKKKYEKLAAEDKKRWELEKKNYDE-KLKTQSQAESSSDS 136
>UNIPROTKB|F5H6J8 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR009071
InterPro:IPR017253 PIRSF:PIRSF037653 Pfam:PF00505 GO:GO:0043231
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
PANTHER:PTHR10270:SF48 HGNC:HGNC:11311 EMBL:AC006040
IPI:IPI01012788 ProteinModelPortal:F5H6J8 SMR:F5H6J8
Ensembl:ENST00000525526 ArrayExpress:F5H6J8 Bgee:F5H6J8
Uniprot:F5H6J8
Length = 197
Score = 137 (53.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 62 TGLRSK----DRIRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQ 117
TG SK DR++RPMNAF+++S+ R K+ +P N +SK LG W L EK
Sbjct: 48 TGENSKGNVQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKW 107
Query: 118 KYHELASEVKEAHFKAHPEWKWCSKDKRK 146
+ + A +++ H + +P +K+ + K K
Sbjct: 108 PFFQEAQKLQAMHREKYPNYKYRPRRKAK 136
>UNIPROTKB|Q29RR8 [details] [associations]
symbol:SOX30 "SRY (Sex determining region Y)-box 30"
species:9913 "Bos taurus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0031960 "response to corticosteroid
stimulus" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043565 GO:GO:0007283 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000981
GO:GO:0031960 KO:K09271 CTD:11063 eggNOG:NOG329829
HOGENOM:HOG000070158 HOVERGEN:HBG057980 OMA:VPQLDIG
OrthoDB:EOG4CVG6C GeneTree:ENSGT00670000098123 EMBL:DAAA02020795
EMBL:DAAA02020796 EMBL:BC114054 IPI:IPI00687049
RefSeq:NP_001039894.1 UniGene:Bt.50786 Ensembl:ENSBTAT00000027304
GeneID:538232 KEGG:bta:538232 InParanoid:Q29RR8 NextBio:20877312
Uniprot:Q29RR8
Length = 766
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 66 SKDR---IRRPMNAFMIFSKRHRAKVHQIHPNQDNRTVSKILGEWWYSLGPEEKQKYHEL 122
SKDR ++RPMNAFM++++ HR + + +P +N +S LG W L E+K+ Y++
Sbjct: 344 SKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDE 403
Query: 123 ASEVKEAHFKAHPEWKWCSKD-KRK 146
A ++KE H + P W + + KRK
Sbjct: 404 AQKIKEKHREEFPGWVYQPRPGKRK 428
WARNING: HSPs involving 105 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 357 331 0.00090 116 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 355
No. of states in DFA: 610 (65 KB)
Total size of DFA: 238 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 32.79u 0.10s 32.89t Elapsed: 00:00:14
Total cpu time: 32.83u 0.10s 32.93t Elapsed: 00:00:18
Start: Thu Aug 15 16:57:59 2013 End: Thu Aug 15 16:58:17 2013
WARNINGS ISSUED: 2