BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16715
(225 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ ++SD EL+ + + + AG+ET + S + LA HP VQ+++ E+ VL P+
Sbjct: 263 ESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL---PN 319
Query: 62 SAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
AP TYD + +++ L V+ ET+RLFP A + R +V+ IP G + I Y L
Sbjct: 320 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 379
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
HR P+ W P +F P+RF + +P Y PF GPR CIG ++A++ MK + +L+
Sbjct: 380 HRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQ 439
Query: 181 RYKILPGDKCKSLQ 194
+ P CK Q
Sbjct: 440 NFSFKP---CKETQ 450
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ ++SD EL+ + + + AG+ET + S + LA HP VQ+++ E+ VL P+
Sbjct: 265 ESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL---PN 321
Query: 62 SAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
AP TYD + +++ L V+ ET+RLFP A + R +V+ IP G + I Y L
Sbjct: 322 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 381
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
HR P+ W P +F P+RF + +P Y PF GPR CIG ++A++ MK + +L+
Sbjct: 382 HRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQ 441
Query: 181 RYKILPGDKCKSLQ 194
+ P CK Q
Sbjct: 442 NFSFKP---CKETQ 452
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ ++SD EL+ + + + AG+ET + S + LA HP VQ+++ E+ VL P+
Sbjct: 264 ESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL---PN 320
Query: 62 SAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
AP TYD + +++ L V+ ET+RLFP A + R +V+ IP G + I Y L
Sbjct: 321 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 380
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
HR P+ W P +F P+RF + +P Y PF GPR CIG ++A++ MK + +L+
Sbjct: 381 HRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQ 440
Query: 181 RYKILPGDKCKSLQ 194
+ P CK Q
Sbjct: 441 NFSFKP---CKETQ 451
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 6/186 (3%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+SD +L + + AG ET + TL L +P V++++Y E+ +G S PT
Sbjct: 269 LSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFS--RTPTI 326
Query: 67 DQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 125
RL LL I+E +RL P AP +I A + G++ + G + I ++ LH + +
Sbjct: 327 SDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEK 386
Query: 126 LWNNPNQFDPDRFL-PSQSSHRNPS-GYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
W+ P+QF P+RFL P+ + +PS Y+PF GPR CIG A ++ ++ +L+R+
Sbjct: 387 EWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFD 446
Query: 184 I-LPGD 188
+ +P D
Sbjct: 447 LEVPDD 452
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 97/182 (53%), Gaps = 3/182 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D + + ++E+ ++V++L G ET+ L LA HP + + +E++ V G P
Sbjct: 254 DNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPV 313
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ ++ +++L VI E MRL PA V+ R A E + G Y IPAGA I Y +
Sbjct: 314 A---FEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQ 370
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ +++ +FDPDR+LP ++++ PFS G R C ++M Q+ + + +
Sbjct: 371 RDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATK 430
Query: 182 YK 183
Y+
Sbjct: 431 YR 432
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
++D E+ ++ LL AG T ++ LA ++Q++ Y E + V G++ TY
Sbjct: 248 LTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPL-TY 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
DQL+ L+LL R IKET+RL P ++ R A YTIP G + + R
Sbjct: 307 DQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDS 366
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
W F+PDR+L + YVPF G CIG +A +Q+KT ST+LR Y+
Sbjct: 367 WVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D ++ S L+ + L+ AG ET + ++ +A++P++Q +V E+ ++G P+
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG--PN 321
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
P++D ++ V+ E +R P+ I + + Y+IP G ++ +Y +
Sbjct: 322 GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
H + W +P F P+RFL S VPFSLG R C+G A ++M + +L+
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQ 441
Query: 181 RYKI 184
R+ +
Sbjct: 442 RFHL 445
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D ++ S L+ + L+ AG ET + ++ +A++P++Q +V E+ ++G P+
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG--PN 321
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
P++D ++ V+ E +R P+ I + + Y+IP G ++ +Y +
Sbjct: 322 GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
H + W +P F P+RFL S VPFSLG R C+G A ++M + +L+
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQ 441
Query: 181 RYKI 184
R+ +
Sbjct: 442 RFHL 445
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
++R ++ + ++ +L A +T+ L L+A HP+V+E + E+Q V+G+
Sbjct: 286 EKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDI 345
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
D +Q+L ++ I E+MR P ++ R A + Y + G +I + I +H
Sbjct: 346 KI---DDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMH 402
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYV-PFSLGPRGCIGSKYAMLQMKTTISTILR 180
R + + PN+F + F + P Y PF GPRGC G AM+ MK + T+LR
Sbjct: 403 R-LEFFPKPNEFTLENF-----AKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLR 456
Query: 181 RY--KILPGDKCKSLQDIRYSGDLWTSPTKVASFLE 214
R+ K L G +S+Q I DL P + + LE
Sbjct: 457 RFHVKTLQGQCVESIQKIH---DLSLHPDETKNMLE 489
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDS 62
+ + D LL V+ AG ET + T++ L+ P + + E+ +V+G
Sbjct: 235 EEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK--R 292
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
++ L RL L++V+KE++RL+P A R E +P + Y + R
Sbjct: 293 YLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGR 352
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR- 181
+ +P F+PDRF P R Y PFSLG R CIG ++A +++K ++ +L+R
Sbjct: 353 MDTYFEDPLTFNPDRFGPGAPKPRFT--YFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRL 410
Query: 182 -YKILPGDK 189
++++PG +
Sbjct: 411 EFRLVPGQR 419
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++V+ L AG ET + S TL L +P V ++ E VL D P+Y
Sbjct: 255 LDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL---VDPVPSY 311
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G I + I LHR
Sbjct: 312 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKT 371
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 372 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 424
Query: 180 RRY 182
+ +
Sbjct: 425 KHF 427
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 10 RELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQL 69
+ L+ ++L AG ETV +LL HP V+ +V+ E+ V+G + P ++
Sbjct: 267 KNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK--NRQPKFEDR 324
Query: 70 QRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ + VI E R P+ +AR + + D+ +P G + + + R P ++
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
NP F+P FL + + +VPFS+G R C G A +++ +T+++ +++
Sbjct: 385 NPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDS 62
Q++ +S +EL + L A ET L L+ +P Q + E+Q VL D +
Sbjct: 275 QQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPD--NQ 332
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
P + L+ + L +KE+MRL P+ P R+ G+Y +P G + + L
Sbjct: 333 TPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGS 392
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ + ++F P+R+L + NP ++PF +G R CIG + A LQ+ + I+++Y
Sbjct: 393 SEDNFEDSHKFRPERWL-QKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKY 451
Query: 183 KILPGD 188
I+ D
Sbjct: 452 DIVATD 457
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 6/193 (3%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D +S EL +++ LL AG ET+ S +LL H ++E V E Q+ L S +
Sbjct: 234 DNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQE-QNKLQLSQE 292
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
T + L+++ L +V++E +RL P R + Q + P G ++ I H
Sbjct: 293 L--TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTH 350
Query: 122 RHPQLWNNPNQFDPDRFLPSQSS-HRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P L+ +P +FDP+RF P S+ H P +VPF G R C+G ++A L+MK + +++
Sbjct: 351 ADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQ 410
Query: 181 RYK--ILPGDKCK 191
++ +LPG +
Sbjct: 411 QFDWTLLPGQNLE 423
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 10 RELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQL 69
+ L+ ++L G ETV +LL HP V+ +V+ E+ V+G + P ++
Sbjct: 267 KNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK--NRQPKFEDR 324
Query: 70 QRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ + VI E R P+ +AR + + D+ +P G + + + R P ++
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
NP F+P FL + + +VPFS+G R C G A +++ +T+++ +++
Sbjct: 385 NPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++V E VL D P+Y
Sbjct: 249 LDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 10 RELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQL 69
+ L+ + L G ETV +LL HP V+ +V+ E+ V+G + P ++
Sbjct: 267 KNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK--NRQPKFEDR 324
Query: 70 QRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ + VI E R P+ +AR + + D+ +P G + + + R P ++
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
NP F+P FL + + +VPFS+G R C G A +++ +T+++ +++
Sbjct: 385 NPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 10 RELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQL 69
+ L+ + L G ETV +LL HP V+ +V+ E+ V+G + P ++
Sbjct: 267 KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK--NRQPKFEDR 324
Query: 70 QRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ + VI E R P+ +AR + + D+ +P G + + + R P ++
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
NP F+P FL + + +VPFS+G R C G A +++ +T+++ +++
Sbjct: 385 NPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 10 RELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQL 69
+ L+ + L G ETV +LL HP V+ +V+ E+ V+G + P ++
Sbjct: 267 KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK--NRQPKFEDR 324
Query: 70 QRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ + VI E R P+ +AR + + D+ +P G + + + R P ++
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
NP F+P FL + + +VPFS+G R C G A +++ +T+++ +++
Sbjct: 385 NPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 307 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 367 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 180 RRY 182
+ +
Sbjct: 420 KHF 422
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 308
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 309 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 368
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 369 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 180 RRY 182
+ +
Sbjct: 422 KHF 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 307 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 367 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 180 RRY 182
+ +
Sbjct: 420 KHF 422
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 308
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P +P + A + V G+Y + G + + I LHR
Sbjct: 309 KQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 368
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 369 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 180 RRY 182
+ +
Sbjct: 422 KHF 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 307 KQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 367 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 180 RRY 182
+ +
Sbjct: 420 KHF 422
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E+ + S L L +P V ++ E VL D P+Y
Sbjct: 250 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 307 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 367 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 180 RRY 182
+ +
Sbjct: 420 KHF 422
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E+ + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E+ + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + P+ G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 308
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P P + A + V G+Y + G + + I LHR
Sbjct: 309 KQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 368
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 369 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 180 RRY 182
+ +
Sbjct: 422 KHF 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L G ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L G ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + P+ G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L G ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L G ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L G ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 10 RELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQL 69
+ L+ ++L AG ETV +LL HP V+ +V+ E+ V+G + P ++
Sbjct: 267 KNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK--NRQPKFEDR 324
Query: 70 QRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ VI E R P+ +A + + D+ +P G + + + R P+ ++
Sbjct: 325 AKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFS 384
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
NP F+P FL + + +VPFS+G R C G A +++ +TI++ ++
Sbjct: 385 NPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRF 440
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L G ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E + S L L +P V ++ E VL D P+Y
Sbjct: 250 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P P + A + V G+Y + G + + I LHR
Sbjct: 307 KQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 367 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 180 RRY 182
+ +
Sbjct: 420 KHF 422
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P P + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R C G ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + P G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 307 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R C G ++A+ + + +L
Sbjct: 367 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMML 419
Query: 180 RRY 182
+ +
Sbjct: 420 KHF 422
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + + L L +P V ++ E VL D P+Y
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQC-GDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +R++P AP + A + G+Y + G + + I LHR
Sbjct: 307 KQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 367 VWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 180 RRY 182
+ +
Sbjct: 420 KHF 422
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG ET + S L L +P V ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + P G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E + S L L +P ++ E VL D P+Y
Sbjct: 249 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL---VDPVPSY 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 366 IWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 180 RRY 182
+ +
Sbjct: 419 KHF 421
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 11 ELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQ 70
E+ +S++ AG T S TLI L H V +EL ++ GD + ++ L+
Sbjct: 245 EITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG--RSVSFHALR 302
Query: 71 RLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNP 130
++ L V+KET+RL P ++ R A E + + I G +A +R P+ + +P
Sbjct: 303 QIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 131 NQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
+ F P R+ P Q N ++PF G C+G+ +A++Q+K S +LR Y+
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 11 ELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQ 70
E+ +S++ AG T S TLI L H V +EL ++ GD + ++ L+
Sbjct: 245 EITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG--RSVSFHALR 302
Query: 71 RLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNP 130
++ L V+KET+RL P ++ R A E + + I G +A +R P+ + +P
Sbjct: 303 QIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 131 NQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
+ F P R+ P Q N ++PF G C+G+ +A++Q+K S +LR Y+
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 11 ELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQ 70
E+ +S++ AG T S TLI L H V +EL ++ GD + ++ L+
Sbjct: 245 EITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG--RSVSFHALR 302
Query: 71 RLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNP 130
++ L V+KET+RL P ++ R A E + + I G +A +R P+ + +P
Sbjct: 303 QIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 131 NQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
+ F P R+ P Q N ++PF G C+G+ +A++Q+K S +LR Y+
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 11 ELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQ 70
E+ +S++ AG T S TLI L H V +EL ++ GD + ++ L+
Sbjct: 245 EITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG--RSVSFHALR 302
Query: 71 RLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNP 130
++ L V+KET+RL P ++ R A E + + I G +A +R P+ + +P
Sbjct: 303 QIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 131 NQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
+ F P R+ P Q N ++PF G C+G+ +A++Q+K S +LR Y+
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D + +++++ L AG E + S L L +P ++ E VL D P++
Sbjct: 250 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL---VDPVPSH 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQ 125
Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I LHR
Sbjct: 307 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 126 LW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+W ++ +F P+RF NPS + PF G R CIG ++A+ + + +L
Sbjct: 367 VWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 180 RRY 182
+ +
Sbjct: 420 KHF 422
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+S +D L + L +AG T + L+L+ +HP VQ V E+ DV+G P
Sbjct: 266 SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQV--RRP 323
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 123
+ T VI E R P+ + +++ + IP G ++ + + +
Sbjct: 324 EMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 124 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
+W P +F P+ FL +Q P ++PFS G R C+G A +++ +++L+ +
Sbjct: 384 EAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFS 443
Query: 184 I 184
Sbjct: 444 F 444
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+S +D L + L +AG T + L+L+ +HP VQ V E+ DV+G P
Sbjct: 266 SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQV--RRP 323
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 123
+ T VI E R P+ + +++ + IP G ++ + + +
Sbjct: 324 EMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 124 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
+W P +F P+ FL +Q P ++PFS G R C+G A +++ +++L+ +
Sbjct: 384 EAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFS 443
Query: 184 I 184
Sbjct: 444 F 444
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 16 MVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD-SAPTYDQLQRLDL 74
+V L G ET S + L HP +Q + EL LG S TY RL L
Sbjct: 284 VVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPL 343
Query: 75 LTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQF 133
L I E +RL P P+ + Y IP G + + G H +W P++F
Sbjct: 344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEF 403
Query: 134 DPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILP 186
PDRFL + NPS + F G R C+G A L++ ++ +L+ + +LP
Sbjct: 404 RPDRFLEPGA---NPSA-LAFGCGARVCLGESLARLELFVVLARLLQAFTLLP 452
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D + + L+ ++SL AG ET +L+ +P V E V E++ V+G
Sbjct: 259 DPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH-- 316
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
P D ++ VI E RL P + + + Q Y IP + +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P+ + PN F+P FL + + + G++PFSLG R C+G A ++ +TIL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 436
Query: 181 RYKI 184
+ I
Sbjct: 437 NFSI 440
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 20 LNAG-FETVMFMTSLTLILLAIHPSVQEEVYNE---LQDVLGDSPDSAPTYDQLQRLDLL 75
L AG +T F +TL LA +P VQ+ + E + + P A T L LL
Sbjct: 285 LTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATT-----ELPLL 339
Query: 76 TRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDP 135
+KET+RL+P + R ++ +Y IPAG + +F+Y L R+ L+ P +++P
Sbjct: 340 RAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNP 399
Query: 136 DRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 165
R+L + S RN +VPF G R C+G +
Sbjct: 400 QRWLDIRGSGRN-FHHVPFGFGMRQCLGRR 428
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D + + L+ ++SL AG ET +L+ +P V E V E++ V+G
Sbjct: 259 DPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH-- 316
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
P D ++ VI E RL P + + + Q Y IP + +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P+ + PN F+P FL + + + G++PFSLG R C+G A ++ +TIL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 436
Query: 181 RYKI 184
+ I
Sbjct: 437 NFSI 440
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D + + L+ ++SL AG ET +L+ +P V E V E++ V+G
Sbjct: 259 DPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH-- 316
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
P D ++ VI E RL P + + + Q Y IP + +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P+ + PN F+P FL + + + G++PFSLG R C+G A ++ +TIL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 436
Query: 181 RYKI 184
+ I
Sbjct: 437 NFSI 440
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D + + L+ ++SL AG ET +L+ +P V E V E++ V+G
Sbjct: 259 DPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH-- 316
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
P D ++ VI E RL P + + + Q Y IP + +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P+ + PN F+P FL + + + G++PFSLG R C+G A ++ +TIL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 436
Query: 181 RYKI 184
+ I
Sbjct: 437 NFSI 440
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+SD ++++ ++ L AGF+TV S +L+ L ++P VQ ++ EL V+G S P
Sbjct: 275 LSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS--RRPRL 332
Query: 67 DQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 125
L + I ET R P I S + + IP G + + + ++ +
Sbjct: 333 SDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQK 392
Query: 126 LWNNPNQFDPDRFL-PSQSSHRNPS-GYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
LW NP++F P+RFL P + + S + F +G R CIG A ++ ++ +L+R
Sbjct: 393 LWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQR 450
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D + + L+ ++SL AG ET +L+ +P V E V E++ V+G
Sbjct: 259 DPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH-- 316
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
P D ++ VI E RL P + + + Q Y IP + +
Sbjct: 317 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 376
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P+ + PN F+P FL + + + G++PFSLG R C G A ++ +TIL+
Sbjct: 377 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQ 436
Query: 181 RYKI 184
+ I
Sbjct: 437 NFSI 440
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ MS ++ + +L G +T L +A + VQ+ + E+ +
Sbjct: 269 SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMA 328
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
T LQ + LL IKET+RL P + + R ++ DY IPA + + IY L R P
Sbjct: 329 T--MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP 386
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGY--VPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ +P FDP R+L S +N + + + F G R C+G + A L+M + +L +
Sbjct: 387 TFFFDPENFDPTRWL---SKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 443
Query: 183 KILPGDKCKSLQDIRYSGDLWTSPTKVASFLEFKTETECGEE 224
++ + + L D+ + +L P K SF + E ++
Sbjct: 444 RV----EIQHLSDVGTTFNLILMPEKPISFTFWPFNQEATQQ 481
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ MS ++ + +L G +T L +A + VQ+ + E+ +
Sbjct: 266 SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMA 325
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
T LQ + LL IKET+RL P + + R ++ DY IPA + + IY L R P
Sbjct: 326 T--MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP 383
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGY--VPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ +P FDP R+L S +N + + + F G R C+G + A L+M + +L +
Sbjct: 384 TFFFDPENFDPTRWL---SKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 440
Query: 183 KILPGDKCKSLQDIRYSGDLWTSPTKVASF 212
++ + + L D+ + +L P K SF
Sbjct: 441 RV----EIQHLSDVGTTFNLILMPEKPISF 466
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 8/190 (4%)
Query: 1 MDQRNSMSDRELLHE-----MVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDV 55
M++ S + E H+ +SL AG ET +L+ +P V E VY E++ V
Sbjct: 253 MEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQV 312
Query: 56 LGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIA 114
+G P P ++ VI E R P+ + Y IP +
Sbjct: 313 IG--PHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVF 370
Query: 115 IFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTT 174
+ + P + P+ F+PD FL + + + ++PFSLG R C+G A ++
Sbjct: 371 LILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLF 430
Query: 175 ISTILRRYKI 184
+TIL+ + +
Sbjct: 431 FTTILQNFSM 440
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 18/182 (9%)
Query: 38 LAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAP 97
L + ++EEV N + GD LQ + LL IKET+RL P + + R
Sbjct: 307 LNVQEMLREEVLNARRQAEGD------ISKMLQMVPLLKASIKETLRLHPISVTLQRYPE 360
Query: 98 YEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS---HRNPSGYVPF 154
++ DY IPA + + IY + R P +++P++FDP R+L RN + F
Sbjct: 361 SDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRN----LGF 416
Query: 155 SLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRYSGDLWTSPTKVASFLE 214
G R C+G + A L+M + IL +K+ + + + D+ +L +P K FL
Sbjct: 417 GWGVRQCVGRRIAELEMTLFLIHILENFKV----EMQHIGDVDTIFNLILTPDK-PIFLV 471
Query: 215 FK 216
F+
Sbjct: 472 FR 473
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T TS +++ L +HP ++ ++L + + P
Sbjct: 253 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPK-NKKWLDKLHKEIDEFPAQLNYD 310
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R ++E++R P ++ R EV+ G Y +P G IA H +
Sbjct: 311 NVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEA 370
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ NP +DP+R + ++ F G CIG K+A+LQ+KT ++T R Y
Sbjct: 371 FPNPRLWDPER------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 420
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T TS +++ L +HP ++ ++L + + P
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPK-NKKWLDKLHKEIDEFPAQLNYD 319
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R ++E++R P ++ R EV+ G Y +P G IA H +
Sbjct: 320 NVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEA 379
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ NP +DP+R + ++ F G CIG K+A+LQ+KT ++T R Y
Sbjct: 380 FPNPRLWDPER------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 429
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T TS +++ L +HP ++ ++L + + P
Sbjct: 247 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPK-NKKWLDKLHKEIDEFPAQLNYD 304
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R ++E++R P ++ R EV+ G Y +P G IA H +
Sbjct: 305 NVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEA 364
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ NP +DP+R + ++ F G CIG K+A+LQ+KT ++T R Y
Sbjct: 365 FPNPRLWDPER------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 414
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 1 MDQRNSM--SDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGD 58
M+Q N++ + L+ + L AG ET +L+LL HP V V E++ V+G
Sbjct: 253 MEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGR 312
Query: 59 SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFI 117
+P R+ VI E R P + + +V+ +Y IP G I +
Sbjct: 313 H--RSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSL 370
Query: 118 YGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 177
+ + + NP FDP FL + + ++PFS G R C+G A +++ +++
Sbjct: 371 TSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTS 430
Query: 178 ILRRYKI 184
IL+ +K+
Sbjct: 431 ILQNFKL 437
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
N + ++++ + + AGF+TV S +L+ L P +Q ++ EL V+G + P
Sbjct: 276 NLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGR--ERRP 333
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 123
+L L I ET R P I S + + IP + + + ++
Sbjct: 334 RLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHD 393
Query: 124 PQLWNNPNQFDPDRFLPSQSSHRNP---SGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P+LW +P++F P+RFL + + N + F +G R CIG A ++ ++ +L+
Sbjct: 394 PELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQ 453
Query: 181 R--YKILPGDKC 190
+ + + PG K
Sbjct: 454 QLEFSVPPGVKV 465
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+Q + + L + V L AG ET L+LL HP V +V E++ V+G +
Sbjct: 258 NQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGR--N 315
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCG----DYTIPAGASIAIFI 117
+P + V+ E R P S P+ V C +Y IP G +I I +
Sbjct: 316 RSPCMQDRSHMPYTDAVVHEVQRYIDLLPT---SLPHAVTCDIKFRNYLIPKGTTILISL 372
Query: 118 YGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 177
+ + + NP FDP FL + + ++PFS G R C+G A +++ +++
Sbjct: 373 TSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTS 432
Query: 178 ILRRYKILPGDKCKSLQDIRYSGDLWTSPT 207
IL+ + + KSL D + +L T+P
Sbjct: 433 ILQNFNL------KSLVDPK---NLDTTPV 453
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+Q + + L + V L AG ET L+LL HP V +V E++ V+G +
Sbjct: 260 NQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGR--N 317
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCG----DYTIPAGASIAIFI 117
+P + V+ E R P S P+ V C +Y IP G +I I +
Sbjct: 318 RSPCMQDRSHMPYTDAVVHEVQRYIDLLPT---SLPHAVTCDIKFRNYLIPKGTTILISL 374
Query: 118 YGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 177
+ + + NP FDP FL + + ++PFS G R C+G A +++ +++
Sbjct: 375 TSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTS 434
Query: 178 ILRRYKILPGDKCKSLQDIRYSGDLWTSPT 207
IL+ + + KSL D + +L T+P
Sbjct: 435 ILQNFNL------KSLVDPK---NLDTTPV 455
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+Q++ + L+ + L AG ET L+LL HP V +V E+ V+G
Sbjct: 259 NQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRH-- 316
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
+P + V+ E R P + + + + +Y IP G +I + +
Sbjct: 317 RSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSV 376
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+ + NPN FDP FL + + ++PFS G R C G A +++ ++TIL+
Sbjct: 377 LHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQ 436
Query: 181 RYKILPGDKCKSLQDIRYSGDLWTSP 206
+ + D K+L + + + P
Sbjct: 437 NFNLKSVDDLKNLNTTAVTKGIVSLP 462
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+Q++ + L+ LL AG ET L+LL HP V +V E++ V+G +
Sbjct: 260 NQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGR--N 317
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCG----DYTIPAGASIAIFI 117
+P + V+ E R P S P+ V C +Y IP G +I +
Sbjct: 318 RSPCMQDRGHMPYTDAVVHEVQRYIDLIPT---SLPHAVTCDVKFRNYLIPKGTTILTSL 374
Query: 118 YGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 177
+ + + NP FDP FL + + + ++PFS G R C+G A +++ ++
Sbjct: 375 TSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTF 434
Query: 178 ILRRYKILPGDKCKSLQDIRYSGDLWTSPT 207
IL+ + + KSL D + DL T+P
Sbjct: 435 ILQNFNL------KSLIDPK---DLDTTPV 455
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 28/199 (14%)
Query: 13 LHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRL 72
L E V+LL AG ETV + + +LL+ P Q+ V +
Sbjct: 212 LSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA----------------- 254
Query: 73 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 132
+E +RL+P A ++ R + G+ +P G ++ + Y R +
Sbjct: 255 ---LAAFQEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEA 309
Query: 133 FDPDRFLPSQSSHRNPSG-YVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI--LPGDK 189
F P+RFL + + PSG Y PF LG R C+G +A+L+ + RR+++ LP +
Sbjct: 310 FQPERFLAERGT---PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR 366
Query: 190 CKSLQDIRYSGDLWTSPTK 208
+ +R G L P +
Sbjct: 367 VLAQVTLRPEGGLPARPRE 385
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 30/200 (15%)
Query: 13 LHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRL 72
L E V+LL AG ETV + + +LL+ P Q+ V +
Sbjct: 212 LSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA----------------- 254
Query: 73 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR-HPQLWNNPN 131
+E +RL+P A ++ R + G+ +P G ++ + Y R H + +
Sbjct: 255 ---LAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH---FPDGE 308
Query: 132 QFDPDRFLPSQSSHRNPSG-YVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI--LPGD 188
F P+RFL + + PSG Y PF LG R C+G +A+L+ + RR+++ LP
Sbjct: 309 AFRPERFLEERGT---PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFP 365
Query: 189 KCKSLQDIRYSGDLWTSPTK 208
+ + +R G L P +
Sbjct: 366 RVLAQVTLRPEGGLPARPRE 385
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T T+ +L+ L + P + + Q++ D + Y
Sbjct: 248 MSQHEVCGMIVAAMFAGQHTSTITTTWSLLHL-MDPRNKRHLAKLHQEI--DEFPAQLNY 304
Query: 67 DQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 125
D ++ + + +E++R P ++ R VQ G Y +P G IA H+ +
Sbjct: 305 DNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEE 364
Query: 126 LWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ NP +++P+R + + F G CIG K+ +LQ+KT ++T+LR Y
Sbjct: 365 AFPNPREWNPERNMKLVDG-----AFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDY 416
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T T+ +++ L +HP+ + + L+ + + P
Sbjct: 249 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL-EALRKEIEEFPAQLNYN 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R +E++R P ++ R +V+ G Y +P G IA H +
Sbjct: 307 NVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 366
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ P ++DP+R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 367 FPEPRRWDPER------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T T+ +++ L +HP+ + + L+ + + P
Sbjct: 250 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL-EALRKEIEEFPAQLNYN 307
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R +E++R P ++ R +V+ G Y +P G IA H +
Sbjct: 308 NVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 367
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ P ++DP+R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 368 FPEPRRWDPER------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 417
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T T+ +++ L +HP+ + + L+ + + P
Sbjct: 249 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL-EALRKEIEEFPAQLNYN 306
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R +E++R P ++ R +V+ G Y +P G IA H +
Sbjct: 307 NVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 366
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ P ++DP+R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 367 FPEPRRWDPER------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T T+ +++ L +HP+ + + L+ + + P
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL-EALRKEIEEFPAQLNYN 319
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R +E++R P ++ R +V+ G Y +P G IA H +
Sbjct: 320 NVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 379
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ P ++DP+R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 380 FPEPRRWDPER------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T T+ +++ L +HP+ + + L+ + + P
Sbjct: 248 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL-EALRKEIEEFPAQLNYN 305
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R +E++R P ++ R +V+ G Y +P G IA H +
Sbjct: 306 NVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 365
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ P ++DP+R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 366 FPEPRRWDPER------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 415
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 8/176 (4%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E+ +V+ + AG T T+ +++ L +HP+ + + L+ + + P
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHL-EALRKEIEEFPAQLNYN 319
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+ + + R +E++R P ++ R +V+ G Y +P G IA H +
Sbjct: 320 NVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 379
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ P ++DP+R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 380 FPEPRRWDPER------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 3/172 (1%)
Query: 16 MVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLL 75
+ L AG ET L++L +P ++E+++ E+ V+G P P Q + +
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIG--PSRIPAIKDRQEMPYM 329
Query: 76 TRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
V+ E R P + A + Y IP G + + + Q + +P +F
Sbjct: 330 DAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFK 389
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILP 186
P+ FL + + PFS G R C G A +++ + IL+ + + P
Sbjct: 390 PEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKP 441
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVM--FMTSLTLILLAIHPSVQEEVYNELQDVLGD 58
+D+R +L+ +V++ +G + + + L+L+A H + + N +L
Sbjct: 216 IDERRRTPGEDLMSGLVAVEESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRT 275
Query: 59 SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIY 118
A R + VI+ETMR P +++R A ++ G +T+P G ++ + +
Sbjct: 276 PGQWAALAADGSRA---SAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLA 332
Query: 119 GLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 178
HR P + P++FDPDR +Q H + F G C+G+ A L+ + +
Sbjct: 333 AAHRDPTIVGAPDRFDPDR---AQIRH------LGFGKGAHFCLGAPLARLEATVALPAL 383
Query: 179 LRRY 182
R+
Sbjct: 384 AARF 387
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+++ +LL + +NAG ET M +L+ +LL P + E+ +
Sbjct: 232 GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDP------------ 279
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRH 123
DL+ + E +R+ A I R A +++ T+PA + + G +
Sbjct: 280 --------DLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHD 331
Query: 124 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
P+ +++P + D HR + +V F G C+G A L+++ + T+LRR
Sbjct: 332 PEQFDDPERVD---------FHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRVP 382
Query: 184 IL 185
L
Sbjct: 383 TL 384
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 5/166 (3%)
Query: 16 MVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLL 75
+ + A +T+ L+L +P VQ V EL V+G D P L +
Sbjct: 284 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR--DRLPCMGDQPNLPYV 341
Query: 76 TRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
+ E MR PV I + Y IP + + + ++ P W NP FD
Sbjct: 342 LAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFD 401
Query: 135 PDRFLPSQS--SHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 178
P RFL + S + FS+G R CIG + + +Q+ IS +
Sbjct: 402 PARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISIL 447
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDS 62
Q ++ L+ LL AG ET M SL ++ L HP E V+ +P
Sbjct: 226 QEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHP--------EQLTVVKANPGR 277
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
P ++E +R F A V +R A +V+ G +I AG + + + +
Sbjct: 278 TPM------------AVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSAN 325
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
P ++ +P D +R ++ F GP C+G A ++++ T+ RR
Sbjct: 326 WDPAVFKDPAVLDVER---------GARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
Query: 182 YKILPGDKCKSLQDIRYSGD 201
L ++D+ + GD
Sbjct: 377 IPSL--RLAVPMEDVPFKGD 394
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 15 EMVS-LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLD 73
E+VS ++N+ + + + L+L+A + + + N + D + +++ +
Sbjct: 184 EVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFT-----RFNLWQRIREEN 238
Query: 74 LLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQF 133
L + I+E +R P R V+ GD TI G + ++I +R +++++ +F
Sbjct: 239 LYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 134 DPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
PD RNP+ ++ F G C+G+ A L+ + I +R++
Sbjct: 299 IPD---------RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 15 EMVS-LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLD 73
E+VS ++N+ + + + L+L+A + + + N + D + +++ +
Sbjct: 184 EVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFT-----RFNLWQRIREEN 238
Query: 74 LLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQF 133
L + I+E +R P R V+ GD TI G + ++I +R +++++ +F
Sbjct: 239 LYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 134 DPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
PD RNP+ ++ F G C+G+ A L+ + I +R++
Sbjct: 299 IPD---------RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDS 62
+++ +++ E + L AG ET + + S +++ L HP E++ L ++PD
Sbjct: 215 EKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHP---EQLLK-----LRENPD- 265
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
L+ ++E +R + AR A ++ TI G + + + +R
Sbjct: 266 -----------LIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANR 314
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
P ++ NP+ FD R+P+ ++ F G C+GS A L+ + I+T+L+R
Sbjct: 315 DPSIFTNPDVFDIT---------RSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQR 364
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 17 VSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLT 76
V LL AG ET + ++ L H V +E L +P+S P
Sbjct: 249 VHLLTAGHETTTNFLAKAVLTLRAHRDVLDE--------LRTTPESTPA----------- 289
Query: 77 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 136
++E MR P + R A +++ GD+ IP G+ + + +R P + +P+ D
Sbjct: 290 -AVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD-- 346
Query: 137 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDI 196
HR V F LG C+G+ A + + + +L L + ++
Sbjct: 347 -------VHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPAL----GRGAHEV 395
Query: 197 RYSGDL-WTSPTK 208
Y+ D+ + PT+
Sbjct: 396 EYADDMVFHGPTR 408
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 32/185 (17%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDS 62
+ + E++ + LL AG ET + +L + L HP E DVL P +
Sbjct: 224 EEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP--------EQIDVLLRDPGA 275
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
++ V++E +R + I R A +++ G TI AG ++ + I ++R
Sbjct: 276 ------------VSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNR 323
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ + NP+ FD + RN +V F G C+G A +++ + + R
Sbjct: 324 DAKAYENPDIFD---------ARRNARHHVGFGHGIHQCLGQNLARAELEIALGGLFAR- 373
Query: 183 KILPG 187
+PG
Sbjct: 374 --IPG 376
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D EL + ++L AG+ET +L + A HP ++ ++P+ AP
Sbjct: 238 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK--------ENPELAP-- 287
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 125
+ ++E +R P PV A R A + + IP G + + + HR P+
Sbjct: 288 ----------QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPR 337
Query: 126 LWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
++ + ++FD + + + + F GP C+G+ A L++ ++ + R
Sbjct: 338 VFADADRFD--------ITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 385
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D EL + ++L AG+ET +L + A HP ++ ++P+ AP
Sbjct: 228 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK--------ENPELAP-- 277
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 125
+ ++E +R P PV A R A + + IP G + + + HR P+
Sbjct: 278 ----------QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPR 327
Query: 126 LWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
++ + ++FD + + + + F GP C+G+ A L++ ++ + R
Sbjct: 328 VFADADRFD--------ITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 375
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 29/168 (17%)
Query: 18 SLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTR 77
SLL+AG +T + + LA P ELQ + D PT L
Sbjct: 245 SLLSAGLDTTVNGIGAAVYCLARFP-------GELQRLRSD-----PT--------LARN 284
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
+E +R R+ EV+ G I G + +F+ +R P+ W++P+ +D
Sbjct: 285 AFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYD--- 341
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 185
R SG+V F G C+G A L+ + +S + R+ +
Sbjct: 342 ------ITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAI 383
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 29/184 (15%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D +S EL + LL AGFET + + + LL HP ++L V D P
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHP-------DQLALVRRD-PS 272
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ P ++E +R R A EV+ G IP +++ + +
Sbjct: 273 ALPN------------AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAAN 320
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ G++ F G C+G A L+ + + + R
Sbjct: 321 RDPKQFPDPHRFD---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGR 371
Query: 182 YKIL 185
+ L
Sbjct: 372 FPAL 375
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
DQ++S+S++ELL + LL AG+E+ + + LL P ++ ++
Sbjct: 234 DQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQL------------- 280
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYG 119
L R +L+ ++E R P + R A +V TI AG +
Sbjct: 281 -------LDRPELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGA 333
Query: 120 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+R + + ++ D D R P+ ++ F G C+G+ A ++++ + +L
Sbjct: 334 ANRDQAQFPDADRIDVD---------RTPNQHLGFGHGVHHCLGAPLARVELQVALEVLL 384
Query: 180 RRYKILPG 187
+R LPG
Sbjct: 385 QR---LPG 389
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
+I E +R+ P R +V+ G I AG+ I I +R P+++++P+ FD R
Sbjct: 267 IINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 326
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
P +S RN S F LGP C G + + T + + RY+
Sbjct: 327 --PPAAS-RNLS----FGLGPHSCAGQIISRAEATTVFAVLAERYE 365
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
+I E +R+ P R +V+ G I AG+ I I +R P+++++P+ FD R
Sbjct: 269 IINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 328
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
P +S RN S F LGP C G + + T + + RY+
Sbjct: 329 --PPAAS-RNLS----FGLGPHSCAGQIISRAEATTVFAVLAERYE 367
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 29/184 (15%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D +S EL + LL AGFE+ + + + LL HP ++L V D P
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHP-------DQLALVRRD-PS 271
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ P ++E +R R A EV+ G IP +++ + +
Sbjct: 272 ALPN------------AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAAN 319
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ G++ F G C+G A L+ + + + R
Sbjct: 320 RDPKQFPDPHRFD---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGR 370
Query: 182 YKIL 185
+ L
Sbjct: 371 FPAL 374
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 29/184 (15%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D +S EL + LL AGFE+ + + + LL HP ++L V D P
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHP-------DQLALVRRD-PS 272
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ P ++E +R R A EV+ G IP +++ + +
Sbjct: 273 ALPN------------AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAAN 320
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ G++ F G C+G A L+ + + + R
Sbjct: 321 RDPKQFPDPHRFD---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGR 371
Query: 182 YKIL 185
+ L
Sbjct: 372 FPAL 375
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 29/184 (15%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D +S EL + LL AGFE + + + LL HP ++L V D P
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHP-------DQLALVRAD-PS 271
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ P ++E +R R A EV+ G IP +++ + +
Sbjct: 272 ALPN------------AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAAN 319
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P + +P++FD R+ G++ F G C+G A L+ + + + R
Sbjct: 320 RDPSQFPDPHRFD---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGR 370
Query: 182 YKIL 185
+ L
Sbjct: 371 FPAL 374
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
DQ++S+S++ELL + LL AG+E+ + + LL P EL+ L D P+
Sbjct: 234 DQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRP--------ELRRQLLDRPE 285
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
P+ ++ LTR + + + AAP R A +V TI AG + +
Sbjct: 286 LIPSA-----VEELTRWVP--LGVGTAAP---RYAVEDVTLRGVTIRAGEPVLASTGAAN 335
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R + + ++ D D R P+ ++ F G C+G+ A ++++ + +L+R
Sbjct: 336 RDQAQFPDADRIDVD---------RTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR 386
Query: 182 YKILPG 187
LPG
Sbjct: 387 ---LPG 389
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 29/184 (15%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D +S EL + LL AGFE + + + LL HP ++L V D P
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHP-------DQLALVRRD-PS 271
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ P ++E +R R A EV+ G IP +++ + +
Sbjct: 272 ALPN------------AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAAN 319
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ G++ F G C+G A L+ + + + R
Sbjct: 320 RDPKQFPDPHRFD---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGR 370
Query: 182 YKIL 185
+ L
Sbjct: 371 FPAL 374
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 237 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 276
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 277 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 336
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 337 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 275
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 276 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 336 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 274
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 335 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 274
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 275 VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 335 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 275
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 276 VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 336 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 29/184 (15%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D +S EL + LL AGFE + + + LL HP ++L V D P
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHP-------DQLALVRRD-PS 272
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ P ++E +R R A EV+ G IP +++ + +
Sbjct: 273 ALPN------------AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAAN 320
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ G++ F G C+G A L+ + + + R
Sbjct: 321 RDPKQFPDPHRFD---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGR 371
Query: 182 YKIL 185
+ L
Sbjct: 372 FPAL 375
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 275
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 276 VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 336 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 274
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 335 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 274
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 275 VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 335 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG T++ M +L + LA HP + L +P AP +
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 275
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 276 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 336 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ ++ ELL LL AG ET + + + + L HP ++L + D
Sbjct: 246 SRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP-------DQLAALRAD------ 292
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYGLH 121
+ LL ++E +R PV + + + V+ D IPAG ++ + + H
Sbjct: 293 -------MTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAH 343
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ +G++ F G CIG+ A L+ + + +L R
Sbjct: 344 RTPERFPDPHRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ ++ ELL LL AG ET + + + + L HP ++L + D
Sbjct: 246 SRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP-------DQLAALRAD------ 292
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYGLH 121
+ LL ++E +R PV + + + V+ D IPAG ++ + + H
Sbjct: 293 -------MTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAH 343
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ +G++ F G CIG+ A L+ + + +L R
Sbjct: 344 RTPERFPDPHRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
DQ++S+S++ELL + LL AG+E+ + + LL P ++ ++
Sbjct: 234 DQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQL------------- 280
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYG 119
L R +L+ ++E R P R A +V TI AG +
Sbjct: 281 -------LDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGA 333
Query: 120 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+R + + ++ D D R P+ ++ F G C+G+ A ++++ + +L
Sbjct: 334 ANRDQAQFPDADRIDVD---------RTPNQHLGFGHGVHHCLGAPLARVELQVALEVLL 384
Query: 180 RRYKILPG 187
+R LPG
Sbjct: 385 QR---LPG 389
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ ++ ELL LL AG ET + + + + L HP ++L + D
Sbjct: 246 SRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP-------DQLAALRAD------ 292
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYGLH 121
+ LL ++E +R PV + + + V+ D IPAG ++ + + H
Sbjct: 293 -------MTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAH 343
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ +G++ F G CIG+ A L+ + + +L R
Sbjct: 344 RTPERFPDPHRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 5 NSMSDRE-LLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSA 63
N DRE L+ + LL AG ET MTSL++I L HP E Y L+
Sbjct: 226 NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHP----EQYAALR---------- 271
Query: 64 PTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
D+ L+ ++E +R A + R A +++ I AG + + +R
Sbjct: 272 --ADR----SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANR 325
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++ +P+ D HR+ ++ F G C+G A L+++ ++ ++ R
Sbjct: 326 DGTVYEDPDALD---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRV 376
Query: 183 KIL 185
L
Sbjct: 377 PTL 379
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 5 NSMSDRE-LLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSA 63
N DRE L+ + LL AG ET MTSL++I L HP E Y L+
Sbjct: 226 NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHP----EQYAALR---------- 271
Query: 64 PTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
L+ ++E +R A + R A +++ I AG + + +R
Sbjct: 272 ------ADRSLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANR 325
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++ +P+ D HR+ ++ F G C+G A L+++ ++ ++ R
Sbjct: 326 DGTVYEDPDALD---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRV 376
Query: 183 KIL 185
L
Sbjct: 377 PTL 379
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 5 NSMSDRE-LLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSA 63
N DRE L+ + LL AG ET MTSL++I L HP E Y L+
Sbjct: 226 NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHP----EQYAALR---------- 271
Query: 64 PTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
L+ ++E +R A + R A +++ I AG + + +R
Sbjct: 272 ------ADRSLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANR 325
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++ +P+ D HR+ ++ F G C+G A L+++ ++ ++ R
Sbjct: 326 DGTVYEDPDALD---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRV 376
Query: 183 KIL 185
L
Sbjct: 377 PTL 379
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 5 NSMSDRE-LLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSA 63
N DRE L+ + LL AG ET MTSL++I L HP E Y L+
Sbjct: 226 NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHP----EQYAALR---------- 271
Query: 64 PTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
L+ ++E +R A + R A +++ I AG + + +R
Sbjct: 272 ------ADRSLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANR 325
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++ +P+ D HR+ ++ F G C+G A L+++ ++ ++ R
Sbjct: 326 DGTVYEDPDALD---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRV 376
Query: 183 KIL 185
L
Sbjct: 377 PTL 379
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 33/180 (18%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+++ + H + LL AG ++V + ++LLA HP ++ L D
Sbjct: 224 GELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHP-------DQRAAALADP----- 271
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVI--ARSAPYEVQCGDYTIPAGASIAIFIYGL-H 121
D++ R ++E +R A + R A +++ G TI AG + +F GL +
Sbjct: 272 --------DVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAG-DLVLFDLGLPN 322
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
+ + P +FD + R P+ ++ F G CIG+ A L+++T + + R
Sbjct: 323 FDERAFTGPEEFD---------AARTPNPHLTFGHGIWHCIGAPLARLELRTMFTKLFTR 373
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 94 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 153
R A +V+ G I G + + P P +FD R P+ ++
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLA 340
Query: 154 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK-CKSLQDIRYSGDL 202
F G CIG + A ++++ T+ RR LPG + K ++++R+ D+
Sbjct: 341 FGFGAHQCIGQQLARIELQIVFETLFRR---LPGLRLAKPVEELRFRHDM 387
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 94 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 153
R A +V+ G I G + + P P +FD R P+ ++
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLA 340
Query: 154 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK-CKSLQDIRYSGDL 202
F G CIG + A ++++ T+ RR LPG + K ++++R+ D+
Sbjct: 341 FGFGAHQCIGQQLARIELQIVFETLFRR---LPGLRLAKPVEELRFRHDM 387
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG ++ M +L + LA HP + L +P AP +
Sbjct: 235 LLVAGNANMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 274
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 335 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG ++ M +L + LA HP + L +P AP +
Sbjct: 235 LLVAGNAVMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 274
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 335 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 28/165 (16%)
Query: 19 LLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRV 78
LL AG ++ M +L + LA HP + L +P AP +
Sbjct: 235 LLVAGNAAMVNMIALGVATLAQHPDQLAQ--------LKANPSLAPQF------------ 274
Query: 79 IKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E R A A I R+A +V GD + A I +R +++ NP++F+ +R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P Q +P G F G CI A ++ T ST+ +++
Sbjct: 335 KWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 94 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 153
R A +V+ G I G + + P P +FD R P+ ++
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLA 340
Query: 154 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK-CKSLQDIRYSGDL 202
F G CIG + A ++++ T+ RR LPG + K ++++R+ D+
Sbjct: 341 FGFGAHQCIGQQLARIELQIVFETLFRR---LPGLRLAKPVEELRFRHDI 387
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ ++D E++ + ++ AG ET + + ++ L+ HP + V + G++ SA
Sbjct: 225 DHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLS------GEAEWSA- 277
Query: 65 TYDQLQRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 123
V++ET+R P + V+ R A +V GD IPAG ++ I YG
Sbjct: 278 -------------VVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDAL-IVSYGALGR 323
Query: 124 PQLWNNPNQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ + P DRF L S +R ++ F GP C G+ + ++ + + R+
Sbjct: 324 DERAHGPTA---DRFDLTRTSGNR----HISFGHGPHVCPGAALSRMEAGVALPALYARF 376
Query: 183 KIL----PGDKCKSLQDIRYSGDLWTSPTKVA 210
L P + ++ + + DL+ P ++A
Sbjct: 377 PHLDLAVPAAELRN-KPVVTQNDLFELPVRLA 407
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 37/172 (21%)
Query: 18 SLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRL----D 73
SLL+AG +T + + + LA P D+ RL
Sbjct: 247 SLLSAGLDTTVNGIAAAVYCLARFP------------------------DEFARLRADPS 282
Query: 74 LLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQF 133
L +E +R R+ +V+ TI G + +F+ +R P+ W++P+++
Sbjct: 283 LARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY 342
Query: 134 DPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 185
D R SG+V F G C+G A L+ + ++ + R+ +
Sbjct: 343 D---------ITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAI 385
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 18 SLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTR 77
+++ AG +TV M ++ LL P + + +L D P+ P
Sbjct: 245 TMVTAGNDTVTGMLGGSMPLLHRRP--------DQRRLLLDDPEGIPD------------ 284
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E +RL +AR+ +V GD TIPAG + + +YG + Q+ PD
Sbjct: 285 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYGSAN-----RDERQYGPD- 337
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P + FS G C+G+ A +Q + ++ +L R
Sbjct: 338 -AAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 77 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 136
+ ++E +R P R +V+ D I G + ++I +R +++ +P+ F PD
Sbjct: 242 KAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD 301
Query: 137 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
R P+ ++ F G C+G+ A L+ + + +++++
Sbjct: 302 R---------TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRV 340
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
+++E +R P P + R+ + IPA + ++ +R ++P++FDP R
Sbjct: 277 IVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR 336
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
+ + F G C+G+ A L+ + + I+ R+ L D+
Sbjct: 337 -------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDR 381
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 18 SLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTR 77
+++ G +TV M ++ LL P + + +L D P+ P
Sbjct: 246 TMVTGGNDTVTGMLGGSMPLLHRRP--------DQRRLLLDDPEGIPD------------ 285
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E +RL +AR+ +V GD TIPAG + + +YG + Q+ PD
Sbjct: 286 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYGSAN-----RDERQYGPD- 338
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P + FS G C+G+ A +Q + ++ +L R
Sbjct: 339 -AAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 381
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
+++E +R P P + R+ + IPA + ++ +R ++P++FDP R
Sbjct: 297 IVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR 356
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
+ + F G C+G+ A L+ + + I+ R+ L D+
Sbjct: 357 -------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDR 401
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 18 SLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTR 77
+++ G +TV M ++ LL P + + +L D P+ P
Sbjct: 245 TMVTGGNDTVTGMLGGSMPLLHRRP--------DQRRLLLDDPEGIPD------------ 284
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
++E +RL +AR+ +V GD TIPAG + + +YG + Q+ PD
Sbjct: 285 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYGSAN-----RDERQYGPD- 337
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P + FS G C+G+ A +Q + ++ +L R
Sbjct: 338 -AAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 79 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 138
++E R +P P + + + G S+ + +YG + P+LW++P++F P+RF
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Query: 139 LPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+ + + P G G R C G + MK ++ ++
Sbjct: 340 AEREENLFDMIPQGGGHAEKGHR-CPGEGITIEVMKASLDFLV 381
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 69 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 129 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 184
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 328 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 69 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 129 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 184
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 320 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 378
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 69 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 129 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 184
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 320 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 378
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 69 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 129 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 184
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 320 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 378
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 69 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 129 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 184
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 328 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 69 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 129 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 184
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 328 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 74 LLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQF 133
L+ R++ E +R R+A + + I G I + +R ++++NP++F
Sbjct: 299 LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEF 358
Query: 134 DPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
D RF P+ ++ F G C+G A L+MK +L + K
Sbjct: 359 DITRF---------PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLK 399
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 72 LDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPN 131
+DLL I+E +R + R+ + + AG I + + ++ +P+
Sbjct: 263 VDLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPD 322
Query: 132 QFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
F DR NP+ +V F G C+G++ A L+++ +LRR
Sbjct: 323 NFRIDR---------NPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRR 363
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 77 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
R+P+ +V F GP C G A L+ + + +L R +PG K
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLK 378
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 77 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
R+P+ +V F GP C G A L+ + + +L R +PG K
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLK 378
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 77 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
R+P+ +V F GP C G A L+ + + +L R +PG K
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLK 378
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 77 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
R+P+ +V F GP C G A L+ + + +L R +PG K
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLK 378
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 77 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
R+P+ +V F GP C G A L+ + + +L R +PG K
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLK 378
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 77 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
R+P+ +V F GP C G A L+ + + +L R +PG K
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLK 378
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 77 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
R+P+ +V F GP C G A L+ + + +L R +PG K
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLK 378
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 37/172 (21%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDS 62
R MS E++ +V+ + G ETV ++ L HP
Sbjct: 214 DRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHP-------------------- 253
Query: 63 APTYDQL----QRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIY 118
DQL +R DLL + ++E +R P+ R +V+ + + +
Sbjct: 254 ----DQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAG 309
Query: 119 GLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQ 170
+R P+ ++ P+ FD + R+P + F G R C+GS A Q
Sbjct: 310 AANRDPRRYDRPDDFDIE---------RDPVPSMSFGAGMRYCLGSYLARTQ 352
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 66 YDQLQRL-DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
+D LQR LL I+E +R + R + + + AG + + +
Sbjct: 253 WDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDE 312
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
++ P +FD RNP+ ++ F G C+G++ A L++ +LRR
Sbjct: 313 AVFCEPEKFD---------VQRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRR--- 360
Query: 185 LPGDKCKSLQDIRYSGDLWTSPTKVASFL 213
L D+R D P + A+F+
Sbjct: 361 --------LPDLRLVADDSVLPLRPANFV 381
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 68 QLQRLDLLTRVIKETMRLFPAAPVIARSAPYE----VQCGDYTIPAGASIAIFIYGLHRH 123
+L L +L +IKE++RL A+ I R+A + ++ G Y I IA++ +H
Sbjct: 322 ELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 124 PQLWNNPNQFDPDRFLPSQSSHRNP---SG------YVPFSLGPRGCIGSKYAMLQMKTT 174
P+++ +P F DR+L + +G Y+PF G C G +A+ ++K
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 175 ISTILRRYKI 184
+ +L +++
Sbjct: 441 LILMLSYFEL 450
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ +S +EL+ + +++ AG +T +++ + ++ L P E V E ++ ++ D
Sbjct: 237 SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE-PGLMRNALDEVL 295
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
+D + R+ + R A +++ +I G + + I R
Sbjct: 296 RFDNILRIGTV------------------RFARQDLEYCGASIKKGEMVFLLIPSALRDG 337
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+++ P+ FD R+ S + + GP C G A L+ + + TI RR+
Sbjct: 338 TVFSRPDVFD---------VRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 68 QLQRLDLLTRVIKETMRLFPAAPVIARSAPYE----VQCGDYTIPAGASIAIFIYGLHRH 123
+L L +L +IKE++RL A+ I R+A + ++ G Y I IA++ +H
Sbjct: 322 ELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 124 PQLWNNPNQFDPDRFLPSQSSHRNP---SG------YVPFSLGPRGCIGSKYAMLQMKTT 174
P+++ +P F DR+L + +G Y+PF G C G +A+ ++K
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 175 ISTILRRYKI 184
+ +L +++
Sbjct: 441 LILMLSYFEL 450
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 34/210 (16%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D ++++D EL +L+ G ETV M ++ L +P E +L +SP+
Sbjct: 225 DHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIE--------LLFESPE 276
Query: 62 SAPTYDQLQRLDLLTRVIKETMR-LFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
A RV+ E +R L P R A +V I AG + I
Sbjct: 277 KA------------ERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMA 324
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+R L +P+ D +R S V F G C+G+ A ++ T+ R
Sbjct: 325 NRDEALTPDPDVLDANRAAVSD---------VGFGHGIHYCVGAALARSMLRMAYQTLWR 375
Query: 181 RYKILPGDKCKS-LQDIRYSGDLWTSPTKV 209
R+ PG + +++++Y P +V
Sbjct: 376 RF---PGLRLAVPIEEVKYRSAFVDCPDQV 402
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
V++E +R A + R +V +P+G + ++ +R P +++P+ F P
Sbjct: 290 VVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPG- 348
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ ++ F G C+GS A +++ + + R
Sbjct: 349 --------RKPNRHITFGHGMHHCLGSALARIELSVVLRVLAER 384
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 70 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
NP + DR NP+ ++ F G C+GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCLGSALGRRHAQIGIEALLKK---MPG 368
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 28/181 (15%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ +D EL V ++ AG + + M L ++ + HP ++ GD +
Sbjct: 219 DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHP-------EQIDAFRGDEQSAQR 271
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
D+L I+ + P IAR ++ I G S+ + +R P
Sbjct: 272 AVDEL---------IRYLTVPYSPTPRIARE---DLTLAGQEIKKGDSVICSLPAANRDP 319
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
L + ++ D R P +V F G C+G+ A L+++T + + RR+
Sbjct: 320 ALAPDVDRLD---------VTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPA 370
Query: 185 L 185
L
Sbjct: 371 L 371
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 42/208 (20%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHP----SVQEEVYNELQDVLGD 58
QR +M LL V+ NAG M L HP +V+EE+ L +
Sbjct: 254 QRRAM----LLQLWVTQGNAGPAAFWVMG-----YLLTHPEALRAVREEIQGGKHLRLEE 304
Query: 59 SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQC-----GDYTIPAGASI 113
+ P +D V+ ET+RL AA +I R + + +Y + G +
Sbjct: 305 RQKNTPVFDS---------VLWETLRL-TAAALITRDVTQDKKICLSNGQEYHLRRGDRL 354
Query: 114 AIFIY-GLHRHPQLWNNPNQFDPDRFLPSQSSHRN-----------PSGYVPFSLGPRGC 161
+F + PQ+ P F DRFL + + + PS VP+ C
Sbjct: 355 CVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPS--VPWGTEDNLC 412
Query: 162 IGSKYAMLQMKTTISTILRRYKILPGDK 189
G +A+ +K + TIL R+ + DK
Sbjct: 413 PGRHFAVHAIKELVFTILTRFDVELCDK 440
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ +S +EL+ + +++ AG +T +++ + ++ L P E V E ++ ++ D
Sbjct: 237 SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE-PGLMRNALDEVL 295
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
++ + R+ + R A +++ +I G + + I R
Sbjct: 296 RFENILRIGTV------------------RFARQDLEYCGASIKKGEMVFLLIPSALRDG 337
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+++ P+ FD R+ S + + GP C G A L+ + + TI RR+
Sbjct: 338 TVFSRPDVFD---------VRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 70 QRLDLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ +L+ ++E +R+ A A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 70 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 70 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 70 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 70 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 260 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 320 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 367
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 30/161 (18%)
Query: 40 IHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA------ 93
+H + EE+ + ++ G+ T +++++L V+ E +R P PV A
Sbjct: 317 VHNRLAEEIRSVIKSNGGEL-----TMGAIEKMELTKSVVYECLRFEP--PVTAQYGRAK 369
Query: 94 RSAPYEVQCGDYTIPAGASIAIFIYGLH----RHPQLWNNPNQFDPDRFLPSQSSH---- 145
+ E + + AG +YG R P++++ ++F P+RF+ +
Sbjct: 370 KDLVIESHDAAFKVKAGE----MLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRH 425
Query: 146 ----RNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P P ++G + C G + +L + + I RRY
Sbjct: 426 VLWSNGPETETP-TVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 30/161 (18%)
Query: 40 IHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA------ 93
+H + EE+ + ++ G+ T +++++L V+ E +R P PV A
Sbjct: 317 VHNRLAEEIRSVIKSNGGEL-----TMGAIEKMELTKSVVYECLRFEP--PVTAQYGRAK 369
Query: 94 RSAPYEVQCGDYTIPAGASIAIFIYGLH----RHPQLWNNPNQFDPDRFLPSQSSH---- 145
+ E + + AG +YG R P++++ ++F P+RF+ +
Sbjct: 370 KDLVIESHDAAFKVKAGE----MLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRH 425
Query: 146 ----RNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P P ++G + C G + +L + + I RRY
Sbjct: 426 VLWSNGPETETP-TVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 70 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 21/159 (13%)
Query: 41 HPSVQEEVYNELQDVL--GDSPDSAPTYDQLQRLD---LLTRVIKETMRLFPAAPVIARS 95
+P V EL+ +L + P S T + LD +L V+ E++RL AAP I R
Sbjct: 292 NPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITRE 350
Query: 96 APYEVQC-----GDYTIPAGASIAIFIY-GLHRHPQLWNNPNQFDPDRFLPSQSSHRN-- 147
++ ++ + G + +F + R P+++ +P F +RFL S +
Sbjct: 351 VVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDF 410
Query: 148 -------PSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+ +P+ G C+G YA+ +K + +L
Sbjct: 411 YKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVL 449
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 21/159 (13%)
Query: 41 HPSVQEEVYNELQDVL--GDSPDSAPTYDQLQRLD---LLTRVIKETMRLFPAAPVIARS 95
+P V EL+ +L + P S T + LD +L V+ E++RL AAP I R
Sbjct: 280 NPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITRE 338
Query: 96 APYEVQC-----GDYTIPAGASIAIFIY-GLHRHPQLWNNPNQFDPDRFLPSQSSHRN-- 147
++ ++ + G + +F + R P+++ +P F +RFL S +
Sbjct: 339 VVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDF 398
Query: 148 -------PSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+ +P+ G C+G YA+ +K + +L
Sbjct: 399 YKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVL 437
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 92 IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGY 151
+AR A +V+ I AG + + +R P ++ +P++ D D R+P+ +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLD---------RDPNPH 346
Query: 152 VPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
+ + G C G+ A +Q + + T+L R LPG
Sbjct: 347 LAYGNGHHFCTGAVLARMQTELLVDTLLER---LPG 379
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 92 IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGY 151
+AR A +V+ I AG + + +R P ++ +P++ D D R+P+ +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLD---------RDPNPH 346
Query: 152 VPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
+ + G C G+ A +Q + + T+L R LPG
Sbjct: 347 LAYGNGHHFCTGAVLARMQTELLVDTLLER---LPG 379
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 73 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 132
+LL +++E +R R+A + + I AG + + + P + P +
Sbjct: 320 NLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 133 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 185
FDP R P+ ++ F G C+G A L+M+ + +L R L
Sbjct: 380 FDPTR--PANR-------HLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSL 423
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 77 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 136
R + E +RL PA + R+A EV+ G++ I G + + + +R P+++ P++ D D
Sbjct: 257 RTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVD 316
Query: 137 RFLPSQ--SSHRNPSGYV 152
R + S+HR G +
Sbjct: 317 RPDADRALSAHRGHPGRL 334
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 70 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 128
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 129 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 187
NP + DR NP+ ++ G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAHGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 73 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 132
+L+ + E +R + A ++ R EV GD T+ G + ++ P + +
Sbjct: 262 ELIPNAVDELLRFYGPA-MVGRLVTQEVTVGDITMKPGQTAMLWF------PIASRDRSA 314
Query: 133 FD-PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR---YKILPGD 188
FD PD + R P+ ++ G C+G+ ++ + I+ L+R + + P
Sbjct: 315 FDSPDNIV----IERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK 370
Query: 189 KCKSL 193
+C+ L
Sbjct: 371 ECEWL 375
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 73 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 132
+L+ + E +R + A ++ R EV GD T+ G + ++ P + +
Sbjct: 263 ELIPNAVDELLRFYGPA-MVGRLVTQEVTVGDITMKPGQTAMLWF------PIASRDRSA 315
Query: 133 FD-PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR---YKILPGD 188
FD PD + R P+ ++ G C+G+ ++ + I+ L+R + + P
Sbjct: 316 FDSPDNIV----IERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK 371
Query: 189 KCKSL 193
+C+ L
Sbjct: 372 ECEWL 376
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 73 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 132
+L+ + E +R + A ++ R EV GD T+ G + ++ P + +
Sbjct: 262 ELIPNAVDELLRFYGPA-MVGRLVTQEVTVGDITMKPGQTAMLWF------PIASRDRSA 314
Query: 133 FD-PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR---YKILPGD 188
FD PD + R P+ ++ G C+G+ ++ + I+ L+R + + P
Sbjct: 315 FDSPDNIV----IERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK 370
Query: 189 KCKSL 193
+C+ L
Sbjct: 371 ECEWL 375
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 28/154 (18%)
Query: 18 SLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTR 77
+LL G +TV M + + LA HP E Q +L + PD P
Sbjct: 230 NLLFGGLDTVAAMIGMVALHLARHP--------EDQRLLRERPDLIPA------------ 269
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
E MR +P ++R+A +V TI G + + + P + P + DR
Sbjct: 270 AADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR 328
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQM 171
L P + +G C+G+ A +++
Sbjct: 329 GL-------APIRHTTMGVGAHRCVGAGLARMEV 355
>pdb|1IW7|C Chain C, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1IW7|M Chain M, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1SMY|C Chain C, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1SMY|M Chain M, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1ZYR|C Chain C, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|1ZYR|M Chain M, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|2A68|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A68|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A69|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A69|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A6E|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6E|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6H|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2A6H|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2CW0|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2CW0|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2BE5|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2BE5|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2O5I|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5I|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5J|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2O5J|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2PPB|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|2PPB|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|3DXJ|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3DXJ|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3EQL|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3EQL|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3AOH|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOI|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|4G7H|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7H|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7O|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7O|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7Z|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4G7Z|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4GZY|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
pdb|4GZZ|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
Length = 1119
Score = 31.2 bits (69), Expect = 0.46, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHIPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 165
P ++ P+ P R++ S ++ + P G + K
Sbjct: 143 SPGVYFTPDPARPGRYIASIIPLPKRGPWIDLEVEPNGVVSMK 185
>pdb|1I6V|C Chain C, Thermus Aquaticus Core Rna Polymerase-Rifampicin Complex
Length = 1118
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 123 HPQLWNNPNQFDPDRFLPS 141
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1HQM|C Chain C, Crystal Structure Of Thermus Aquaticus Core Rna
Polymerase- Includes Complete Structure With Side-Chains
(Except For Disordered Regions)-Further Refined From
Original Deposition-Contains Additional Sequence
Information
Length = 1119
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 123 HPQLWNNPNQFDPDRFLPS 141
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1YNJ|C Chain C, Taq Rna Polymerase-Sorangicin Complex
pdb|1YNN|C Chain C, Taq Rna Polymerase-rifampicin Complex
pdb|2GHO|C Chain C, Recombinant Thermus Aquaticus Rna Polymerase For
Structural Studies
Length = 1119
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 123 HPQLWNNPNQFDPDRFLPS 141
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1L9U|C Chain C, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9U|L Chain L, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9Z|C Chain C, Thermus Aquaticus Rna Polymerase HoloenzymeFORK-Junction
Promoter Dna Complex At 6.5 A Resolution
Length = 1118
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 123 HPQLWNNPNQFDPDRFLPS 141
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1V0D|A Chain A, Crystal Structure Of Caspase-Activated Dnase (Cad)
Length = 329
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 134 DPDRFLPSQSSHRNPSGYVPFSLGP--RGCIGSKYAMLQMKTTISTILRRYKILPGDKCK 191
DP F +S RN SGY+ +S RG + A M + Y + G C+
Sbjct: 141 DPSWFEGLESRFRNKSGYLRYSCESRIRGYLREVSAYTSMVDEAAQ--EEYLRVLGSMCQ 198
Query: 192 SLQDIRYSGDLWTSPTKVASFL 213
L+ ++Y+G + + +S L
Sbjct: 199 KLKSVQYNGSYFDRGAEASSRL 220
>pdb|3M6Y|A Chain A, Structure Of 4-Hydroxy-2-Oxoglutarate Aldolase From
Bacillus Cereus At 1.45 A Resolution.
pdb|3M6Y|B Chain B, Structure Of 4-Hydroxy-2-Oxoglutarate Aldolase From
Bacillus Cereus At 1.45 A Resolution.
pdb|3M6Y|C Chain C, Structure Of 4-Hydroxy-2-Oxoglutarate Aldolase From
Bacillus Cereus At 1.45 A Resolution.
pdb|3M6Y|D Chain D, Structure Of 4-Hydroxy-2-Oxoglutarate Aldolase From
Bacillus Cereus At 1.45 A Resolution
Length = 275
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 131 NQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 178
N + D ++ S S GYV S GP G + A++ +KT I+ +
Sbjct: 130 NLGEKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVPIKTAIALV 177
>pdb|3DNP|A Chain A, Crystal Structure Of Stress Response Protein Yhax From
Bacillus Subtilis
Length = 290
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 12 LLHEMVSLLNAGFETVMFMTSLTLILLAIHPS------VQEEVYNELQDVLGDSPDSAPT 65
LLHE S+ N + S L IHPS VQ L D+L D P SAP
Sbjct: 108 LLHEKYSIGNK-----KKVNSNLLGKALIHPSDPIFYPVQ--FVESLSDLLXDEPVSAPV 160
Query: 66 YDQLQRLDLLTRVIKETMRLFPAAPVI 92
+ D+ + + + FPA VI
Sbjct: 161 IEVYTEHDIQHDITETITKAFPAVDVI 187
>pdb|3N73|A Chain A, Crystal Structure Of A Putative 4-Hydroxy-2-Oxoglutarate
Ald Bacillus Cereus
pdb|3N73|B Chain B, Crystal Structure Of A Putative 4-Hydroxy-2-Oxoglutarate
Ald Bacillus Cereus
Length = 251
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 131 NQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 178
N D ++ S S GYV S GP G + A++ +KT I+ +
Sbjct: 106 NLGGKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVPIKTAIALV 153
>pdb|3MUX|A Chain A, The Crystal Structure Of A Putative
4-Hydroxy-2-Oxoglutarate From Bacillus Anthracis To
1.45a
pdb|3MUX|B Chain B, The Crystal Structure Of A Putative
4-Hydroxy-2-Oxoglutarate From Bacillus Anthracis To
1.45a
Length = 251
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 131 NQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 178
N D ++ S S GYV S GP G + A++ +KT I+ +
Sbjct: 106 NLGGKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVPIKTAIALV 153
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,774,919
Number of Sequences: 62578
Number of extensions: 269719
Number of successful extensions: 1004
Number of sequences better than 100.0: 206
Number of HSP's better than 100.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 609
Number of HSP's gapped (non-prelim): 207
length of query: 225
length of database: 14,973,337
effective HSP length: 95
effective length of query: 130
effective length of database: 9,028,427
effective search space: 1173695510
effective search space used: 1173695510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)