RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16715
(225 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 229 bits (587), Expect = 7e-74
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSL----TLILLAIHPSVQEEVYNELQDVLGDSP 60
+ D LL V+ AG ET ++ T++ L+ P + + E+ +V+G
Sbjct: 237 GAQDDEGLLDNFVTFFIAGHET----SANHLAFTVMELSRQPEIVARLQAEVDEVIGS-- 290
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
++ L RL L++V+KE++RL+P A R E +P + Y +
Sbjct: 291 KRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVM 350
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
R + +P F+PDRF P + Y PFSLG R CIG ++A +++K ++ +L+
Sbjct: 351 GRMDTYFEDPLTFNPDRFGPGAP--KPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQ 408
Query: 181 RYKILP 186
R +
Sbjct: 409 RLEFRL 414
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 229 bits (585), Expect = 2e-73
Identities = 61/180 (33%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
++D E+ ++ LL AG T ++ LA ++Q++ Y E + V G++
Sbjct: 246 RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP-PL 304
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
TYDQL+ L+LL R IKET+RL P ++ R A YTIP G + + R
Sbjct: 305 TYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLK 364
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
W F+PDR+L + YVPF G CIG +A +Q+KT ST+LR Y+
Sbjct: 365 DSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 226 bits (579), Expect = 2e-72
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 3/182 (1%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ + ++E+ ++V++L G ET+ L LA HP + + +E++ V G P
Sbjct: 257 DPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRP---V 313
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
++ +++L VI E MRL PA V+ R A E + G Y IPAGA I Y + R P
Sbjct: 314 AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
+ +++ +FDPDR+LP ++++ PFS G R C ++M Q+ + + +Y+
Sbjct: 374 KSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
Query: 185 LP 186
Sbjct: 434 EQ 435
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 222 bits (569), Expect = 1e-70
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 9/212 (4%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
++ + ++ +L A +T+ L L+A HP+V+E + E+Q V+G+
Sbjct: 289 GDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD---I 345
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
D +Q+L ++ I E+MR P ++ R A + Y + G +I + I +HR
Sbjct: 346 KIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-L 404
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
+ + PN+F + F + + PF GPRGC G AM+ MK + T+LRR+ +
Sbjct: 405 EFFPKPNEFTLENFAKN----VPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHV 460
Query: 185 LPGDKCKSLQDIRYSGDLWTSPTKVASFLEFK 216
++ I+ DL P + + LE
Sbjct: 461 KTLQGQC-VESIQKIHDLSLHPDETKNMLEMI 491
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 217 bits (555), Expect = 4e-69
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
S E+ +S++ AG T S TLI L H V +EL ++ GD
Sbjct: 236 TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--G 293
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ ++ L+++ L V+KET+RL P ++ R A E + + I G +A +
Sbjct: 294 RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISN 353
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSH-RNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
R P+ + +P+ F P R+ + N ++PF G C+G+ +A++Q+K S +LR
Sbjct: 354 RIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLR 413
Query: 181 RYKI 184
Y+
Sbjct: 414 EYEF 417
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 211 bits (539), Expect = 1e-66
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSL----TLILLAIHPSVQEEVYNELQDVLGDSP 60
+ D + +++++ L AG ET TS L L +P V ++ E VL D
Sbjct: 247 EPLDDENIRYQIITFLIAGHET----TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQ-CGDYTIPAGASIAIFIYG 119
P+Y Q+++L + V+ E +RL+P AP + A + G+Y + G + + I
Sbjct: 303 ---PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 120 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 178
LHR +W ++ +F P+RF + + PF G R CIG ++A+ + + +
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENPSA--IPQHAFKPFGNGQRACIGQQFALHEATLVLGMM 417
Query: 179 LRRYKILP 186
L+ +
Sbjct: 418 LKHFDFED 425
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 210 bits (537), Expect = 2e-66
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSV--QEEVYNELQDVLGDSPDS 62
MS E+ +V+ + AG T T+ +++ L +V E + E+++
Sbjct: 247 TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN-- 304
Query: 63 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
+ + + R +E++R P ++ R +V+ G Y +P G IA H
Sbjct: 305 --YNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 362
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+ + P ++DP+R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 363 DEEAFPEPRRWDPERDE------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
Query: 183 KI 184
Sbjct: 417 DF 418
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 203 bits (519), Expect = 6e-64
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D +S EL +++ LL AG ET+ S +LL H ++E V E +
Sbjct: 234 DNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQE- 292
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
T + L+++ L +V++E +RL P R + Q + P G ++ I H
Sbjct: 293 --LTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTH 350
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSG-YVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P L+ +P +FDP+RF P S+ NP +VPF G R C+G ++A L+MK + +++
Sbjct: 351 ADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQ 410
Query: 181 RYK--ILPGDKCK 191
++ +LPG +
Sbjct: 411 QFDWTLLPGQNLE 423
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 192 bits (491), Expect = 3e-59
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSP 60
+ Q++ +S +EL + L A ET L L+ +P Q + E+Q VL D
Sbjct: 273 IYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPD-- 330
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
+ P + L+ + L +KE+MRL P+ P R+ G+Y +P G + + L
Sbjct: 331 NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVL 390
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+ + ++F P+R+L + NP ++PF +G R CIG + A LQ+ + I++
Sbjct: 391 GSSEDNFEDSHKFRPERWLQKEKK-INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQ 449
Query: 181 RYKILPGDKCKSLQDIRYSGDLWTSPTK 208
+Y I+ D + + P++
Sbjct: 450 KYDIVATDN----EPVEMLHLGILVPSR 473
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 186 bits (474), Expect = 1e-57
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 32/191 (16%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSL----TLILLAIHPSVQEEVYNELQDVLG 57
+ + L E V+LL AG ET + + +LL+ P Q+ V + L
Sbjct: 201 PPLSHLPRERALSEAVTLLVAGHET----VASALTWSFLLLSHRPDWQKRVAESEEAALA 256
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFI 117
+E +RL+P A ++ R + G+ +P G ++ +
Sbjct: 257 --------------------AFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSP 296
Query: 118 YGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 177
Y R + + F P+RFL + + Y PF LG R C+G +A+L+ +
Sbjct: 297 YVTQRLH--FPDGEAFRPERFLEERGTPSG--RYFPFGLGQRLCLGRDFALLEGPIVLRA 352
Query: 178 ILRRYKILPGD 188
RR+++ P
Sbjct: 353 FFRRFRLDPLP 363
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 187 bits (477), Expect = 3e-57
Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 14/200 (7%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVM--FMTSLTLILLAIHPSVQEEVYNELQDVLGDSP 60
+ +S E H ++ M ++ + V + E++ V+ +
Sbjct: 274 DKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSN- 332
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA--PYEVQCGD--YTIPAGASIAIF 116
T +++++L V+ E +R P A ++ D + + AG + +
Sbjct: 333 GGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGY 392
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPF-------SLGPRGCIGSKYAML 169
R P++++ ++F P+RF+ + ++G + C G + +L
Sbjct: 393 QPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVL 452
Query: 170 QMKTTISTILRRYKILPGDK 189
+ + I RRY +
Sbjct: 453 VARLFVIEIFRRYDSFDIEV 472
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 185 bits (472), Expect = 2e-56
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLI----LLAIHPSVQEEVYNELQDVLGD 58
+ MS ++ + +L G +T TS+TL +A + VQ+ + E+
Sbjct: 267 GDSKMSFEDIKANVTEMLAGGVDT----TSMTLQWHLYEMARNLKVQDMLRAEVLAARHQ 322
Query: 59 SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIY 118
LQ + LL IKET+RL P + + R ++ DY IPA + + IY
Sbjct: 323 --AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIY 380
Query: 119 GLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 178
L R P + +P FDP R+L + + F G R C+G + A L+M + +
Sbjct: 381 ALGREPTFFFDPENFDPTRWLSKDKN-ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINM 439
Query: 179 LRRYKILPGDKCKSLQDIRYSGDLWTSPTK 208
L +++ + + L D+ + +L P K
Sbjct: 440 LENFRV----EIQHLSDVGTTFNLILMPEK 465
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 184 bits (469), Expect = 5e-56
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ ++SD EL+ + + + AG+ET + S + LA HP VQ+++ E+ VL +
Sbjct: 263 ESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN--K 320
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ PTYD + +++ L V+ ET+RLFP A + R +V+ IP G + I Y LH
Sbjct: 321 APPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALH 380
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ W P +F P+RF + +P Y PF GPR CIG ++A++ MK + +L+
Sbjct: 381 RDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQN 440
Query: 182 YKILPGDK 189
+ P +
Sbjct: 441 FSFKPCKE 448
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 181 bits (460), Expect = 7e-55
Identities = 32/203 (15%), Positives = 81/203 (39%), Gaps = 17/203 (8%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETV-MFMTSLTLILLAIHPSVQEEVYNELQDVLGDS 59
++ D + + + ++ F V + + + ++ ++ E++ +
Sbjct: 255 AEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSY 314
Query: 60 PDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA--PYEVQCGD--YTIPAGASIAI 115
D T + ++++ L V+ E++R+ P P A + ++ D + + G +
Sbjct: 315 GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFG 374
Query: 116 FIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP---------RGCIGSKY 166
+ + P++++ P ++ PDRF+ YV +S GP + C G +
Sbjct: 375 YQPFATKDPKVFDRPEEYVPDRFVGDG---EALLKYVWWSNGPETESPTVENKQCAGKDF 431
Query: 167 AMLQMKTTISTILRRYKILPGDK 189
+L + + + RRY +
Sbjct: 432 VVLITRLFVIELFRRYDSFEIEL 454
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 177 bits (452), Expect = 2e-53
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 29/216 (13%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLT----LILLAIHPSVQEEVYNELQDVL 56
D ++ D E + +L A T L + +P + E++ L
Sbjct: 247 NDTLSTFDDLEKAKTHLVVLWASQAN----TIPATFWSLFQMIRNPEAMKAATEEVKRTL 302
Query: 57 GDS--------PDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI---ARSAPYEVQCGDY 105
++ + +L L +L +IKE++RL A+ I ++ G Y
Sbjct: 303 ENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSY 362
Query: 106 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHR---------NPSGYVPFSL 156
I IA++ +H P+++ +P F DR+L + Y+PF
Sbjct: 363 NIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGS 422
Query: 157 GPRGCIGSKYAMLQMKTTISTILRRYKI-LPGDKCK 191
G C G +A+ ++K + +L +++ L + K
Sbjct: 423 GATICPGRLFAIHEIKQFLILMLSYFELELIEGQAK 458
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 173 bits (441), Expect = 7e-52
Identities = 43/217 (19%), Positives = 79/217 (36%), Gaps = 21/217 (9%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGD---- 58
+ +S+ +V L A + L+ L +P V EL+ +L
Sbjct: 254 EEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQP 313
Query: 59 -SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA--PYEVQCGD---YTIPAGAS 112
S + L +L V+ E++RL A P I R + D + + G
Sbjct: 314 VSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDR 372
Query: 113 IAIF-IYGLHRHPQLWNNPNQFDPDRFLPSQSSH---------RNPSGYVPFSLGPRGCI 162
+ +F R P+++ +P F +RFL S R + +P+ G C+
Sbjct: 373 LLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCL 432
Query: 163 GSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRYS 199
G YA+ +K + +L + + + + S
Sbjct: 433 GRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLS 469
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 155 bits (394), Expect = 1e-45
Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 28/192 (14%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSP 60
D+ + + + + + + + L ++ +
Sbjct: 220 RDRHDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAAL------------ 267
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
+Q+ D ++E R +P P + A + + P G + + +YG
Sbjct: 268 --------VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGS 319
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP----RGCIGSKYAMLQMKTTIS 176
+ W +P +F P+RF + ++P G C G + MK
Sbjct: 320 NHDAATWADPQEFRPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAH 376
Query: 177 TILRRYKI-LPG 187
++ + +P
Sbjct: 377 LLVNAMRYDVPD 388
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 152 bits (386), Expect = 2e-44
Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 27/184 (14%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ + R E++++L + + + + L HP +E + +
Sbjct: 226 SQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG------------- 271
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
++E R +P P + + + G S+ + +YG + P
Sbjct: 272 ------NSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDP 325
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP----RGCIGSKYAMLQMKTTISTILR 180
+LW++P++F P+RF + N +P G C G + MK ++ ++
Sbjct: 326 RLWDHPDEFRPERFAERE---ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVH 382
Query: 181 RYKI 184
+ +
Sbjct: 383 QIEY 386
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 132 bits (335), Expect = 1e-36
Identities = 38/206 (18%), Positives = 66/206 (32%), Gaps = 28/206 (13%)
Query: 3 QRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLI----LLAIHPSVQEEVYNELQDVLGD 58
Q + M+ L L HP V E+
Sbjct: 245 QDEGIDAEMQRRAMLLQLWVTQGN----AGPAAFWVMGYLLTHPEALRAVREEI-----Q 295
Query: 59 SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYEVQC---GDYTIPAGASIA 114
++ + + V+ ET+RL AA + + ++ +Y + G +
Sbjct: 296 GGKHLRLEERQKNTPVFDSVLWETLRLTAAALITRDVTQDKKICLSNGQEYHLRRGDRLC 355
Query: 115 IF-IYGLHRHPQLWNNPNQFDPDRFLPS---------QSSHRNPSGYVPFSLGPRGCIGS 164
+F PQ+ P F DRFL + ++ R VP+ C G
Sbjct: 356 VFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGR 415
Query: 165 KYAMLQMKTTISTILRRYKI-LPGDK 189
+A+ +K + TIL R+ + L
Sbjct: 416 HFAVHAIKELVFTILTRFDVELCDKN 441
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 126 bits (318), Expect = 4e-34
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 16/207 (7%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
+ + + + +V L G ET T+ TL L HP +Q + EL LG
Sbjct: 270 EGPGQLLEGHVHMSVVDLFIGGTET----TASTLSWAVAFLLHHPEIQRRLQEELDRELG 325
Query: 58 -DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAI 115
+ S TY RL LL I E +RL P P+ + Y IP G +
Sbjct: 326 PGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIP 385
Query: 116 FIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTI 175
+ G H +W P++F PDRFL ++ + F G R C+G A L++ +
Sbjct: 386 NLQGAHLDETVWEQPHEFRPDRFLEPGANPS----ALAFGCGARVCLGESLARLELFVVL 441
Query: 176 STILRRY--KILPGDKCKSLQDIRYSG 200
+ +L+ + P SLQ Y G
Sbjct: 442 ARLLQAFTLLPPPVGALPSLQPDPYCG 468
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 125 bits (316), Expect = 7e-34
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
D ++ S L+ + L+ AG ET T+ L + +A++P++Q +V E+ ++G
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTET----TTNVLRWAILFMALYPNIQGQVQKEIDLIMG 319
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
P+ P++D ++ V+ E +R P+ I + + Y+IP G ++
Sbjct: 320 --PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+Y +H + W +P F P+RFL S VPFSLG R C+G A ++M +
Sbjct: 378 LYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFT 437
Query: 177 TILRRYKILP 186
+L+R+ +
Sbjct: 438 ALLQRFHLHF 447
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 123 bits (312), Expect = 2e-33
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
+ +S +D L + L +AG T TS TL +L+ +HP VQ V E+ DV+G
Sbjct: 263 NPESSFNDENLRIVVADLFSAGMVT----TSTTLAWGLLLMILHPDVQRRVQQEIDDVIG 318
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
P + T VI E R P+ + +++ + IP G ++
Sbjct: 319 --QVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITN 376
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ + + +W P +F P+ FL +Q P ++PFS G R C+G A +++ +
Sbjct: 377 LSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFT 436
Query: 177 TILRRYKILP 186
++L+ +
Sbjct: 437 SLLQHFSFSV 446
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 122 bits (309), Expect = 9e-33
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
+SD +L + + AG ET T+ + L +P V++++Y E+ +G
Sbjct: 264 QDSELLSDNHILTTIGDIFGAGVET----TTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG 319
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
PT RL LL I+E +RL P AP+ I A + G++ + G + I
Sbjct: 320 --FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIIN 377
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPS--QSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTT 174
++ LH + + W+ P+QF P+RFL Y+PF GPR CIG A ++
Sbjct: 378 LWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLI 437
Query: 175 ISTILRRY--KILPGDKCKSLQ 194
++ +L+R+ ++ + SL+
Sbjct: 438 MAWLLQRFDLEVPDDGQLPSLE 459
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 121 bits (307), Expect = 2e-32
Identities = 47/197 (23%), Positives = 73/197 (37%), Gaps = 15/197 (7%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
+ + + + A +T S L +L +P VQ V EL V+G
Sbjct: 270 GGGARLDLENVPATITDIFGASQDT----LSTALQWLLLLFTRYPDVQTRVQAELDQVVG 325
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
D P L + + E MR PV I + Y IP + +
Sbjct: 326 --RDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVN 383
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHR--NPSGYVPFSLGPRGCIGSKYAMLQMKTT 174
+ ++ P W NP FDP RFL S + FS+G R CIG + + +Q+
Sbjct: 384 QWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLF 443
Query: 175 ISTILRRY--KILPGDK 189
IS + + + P +
Sbjct: 444 ISILAHQCDFRANPNEP 460
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 119 bits (302), Expect = 7e-32
Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
N + ++++ + + AGF+T + + + L P +Q ++ EL V+G
Sbjct: 273 ASGNLIPQEKIVNLVNDIFGAGFDT----VTTAISWSLMYLVTKPEIQRKIQKELDTVIG 328
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
+ P +L L I ET R P I S + + IP + +
Sbjct: 329 --RERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVN 386
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN---PSGYVPFSLGPRGCIGSKYAMLQMKT 173
+ ++ P+LW +P++F P+RFL + + N + F +G R CIG A ++
Sbjct: 387 QWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFL 446
Query: 174 TISTILRRYKILP 186
++ +L++ +
Sbjct: 447 FLAILLQQLEFSV 459
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 118 bits (297), Expect = 3e-31
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
+Q + + L + V L AG ET TS TL +LL HP V +V E++ V+G
Sbjct: 260 NQPSEFTIESLENTAVDLFGAGTET----TSTTLRYALLLLLKHPEVTAKVQEEIERVIG 315
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
+ +P + V+ E R P + + +++ +Y IP G +I I
Sbjct: 316 --RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILIS 373
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ + + + NP FDP FL + + ++PFS G R C+G A +++ ++
Sbjct: 374 LTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLT 433
Query: 177 TILRRYKILP 186
+IL+ + +
Sbjct: 434 SILQNFNLKS 443
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 116 bits (293), Expect = 1e-30
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
D + + L+ ++SL AG ET TS TL +L+ +P V E V E++ V+G
Sbjct: 259 DPSSEFHHQNLILTVLSLFFAGTET----TSTTLRYGFLLMLKYPHVTERVQKEIEQVIG 314
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
P D ++ VI E RL P + + + Q Y IP +
Sbjct: 315 --SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPV 372
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ P+ + PN F+P FL + + + G++PFSLG R C+G A ++ +
Sbjct: 373 LSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFT 432
Query: 177 TILRRYKILP 186
TIL+ + I
Sbjct: 433 TILQNFSIAS 442
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 115 bits (290), Expect = 3e-30
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 11/190 (5%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
+ + + L AG ET TS TL ++L +P ++E+++ E+ V+G
Sbjct: 258 SAERLYTMDGITVTVADLFFAGTET----TSTTLRYGLLILMKYPEIEEKLHEEIDRVIG 313
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
P P Q + + V+ E R P + A + Y IP G +
Sbjct: 314 --PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPT 371
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ + Q + +P +F P+ FL + + PFS G R C G A +++ +
Sbjct: 372 LDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLC 431
Query: 177 TILRRYKILP 186
IL+ + + P
Sbjct: 432 AILQHFNLKP 441
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 114 bits (287), Expect = 8e-30
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTL----ILLAIHPSVQEEVYNELQDVLG 57
+ + L+ ++L G ET S TL +LL HP V+ +V+ E+ V+G
Sbjct: 259 NPNTEFYLKNLVMTTLNLFIGGTET----VSTTLRYGFLLLMKHPEVEAKVHEEIDRVIG 314
Query: 58 DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
+ P ++ ++ + VI E R P+ +AR + + D+ +P G +
Sbjct: 315 --KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPM 372
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ + R P ++NP F+P FL + + +VPFS+G R C G A +++ +
Sbjct: 373 LGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 177 TILRRYKILP 186
T+++ +++
Sbjct: 433 TVMQNFRLKS 442
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 90.8 bits (226), Expect = 2e-21
Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 37/185 (20%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
++ E + SLL+AG +T + + + LA P
Sbjct: 231 SDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFP------------------- 271
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFI 117
D+ RL L +E +R R+ +V+ TI G + +F+
Sbjct: 272 -----DEFARLRADPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFL 326
Query: 118 YGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 177
+R P+ W++P+++D R SG+V F G C+G A L+ + ++
Sbjct: 327 GSANRDPRRWDDPDRYDI---------TRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAA 377
Query: 178 ILRRY 182
+ R+
Sbjct: 378 LARKV 382
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 89.7 bits (223), Expect = 4e-21
Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 29/181 (16%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+SD+++L ++++L A E +L + L +P
Sbjct: 254 LSDKDILALILNVLLAATEPADKTLALMIYHLLNNP------------------------ 289
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
+Q+ + L+ R I ET+R P +I R + G I + I +R
Sbjct: 290 EQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANR 349
Query: 123 HPQLWNNPNQFDPDR-FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
P+ + P+ F+ R L +S+ + ++ F G C+G+ +A +++ + +L +
Sbjct: 350 DPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDK 409
Query: 182 Y 182
Sbjct: 410 M 410
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 86.9 bits (216), Expect = 4e-20
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 37/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+++ E + L AG ET + + S +++ L HP
Sbjct: 219 LTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHP------------------------ 254
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
+QL +L DL+ ++E +R + AR A ++ TI G + + + +R
Sbjct: 255 EQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANR 314
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P ++ NP+ FD R+P+ ++ F G C+GS A L+ + I+T+L+R
Sbjct: 315 DPSIFTNPDVFDI---------TRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 86.2 bits (214), Expect = 6e-20
Identities = 38/182 (20%), Positives = 67/182 (36%), Gaps = 40/182 (21%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+L +++ G +TV M ++ LL P
Sbjct: 235 AGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRP------------------------ 270
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
DQ + L + + ++E +RL +AR+ +V GD TIPAG + + +R
Sbjct: 271 DQRRLLLDDPEGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANR 330
Query: 123 HPQLWNNPNQF--DPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+ Q+ D R P + FS G C+G+ A +Q + ++ +L
Sbjct: 331 ------DERQYGPDAAELDV----TRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLA 380
Query: 181 RY 182
R
Sbjct: 381 RC 382
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 85.8 bits (213), Expect = 7e-20
Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 37/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+++ E++ LL AG ET + + + + + P
Sbjct: 241 LTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTP------------------------ 276
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
Q L + VI+ETMR P +++R A ++ G +T+P G ++ + + HR
Sbjct: 277 GQWAALAADGSRASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHR 336
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P + P++FDPD R ++ F G C+G+ A L+ + + R+
Sbjct: 337 DPTIVGAPDRFDPD---------RAQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 85.4 bits (212), Expect = 1e-19
Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 35/180 (19%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+++ E + ++ G + ++ + + L A P
Sbjct: 218 ITESEAIATILVFYAVGHMAIGYLIASGIELFARRP------------------------ 253
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
+ +I E +R+ P R +V+ G I AG+ I I +R
Sbjct: 254 EVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANR 313
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P+++++P+ FD R P+ S + + F LGP C G + + T + + RY
Sbjct: 314 DPEVFDDPDVFDHTRP-PAASRN------LSFGLGPHSCAGQIISRAEATTVFAVLAERY 366
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 84.2 bits (209), Expect = 3e-19
Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 37/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S ++ V LL AG ET + ++ L H
Sbjct: 239 LSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHR------------------------ 274
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
D L L + ++E MR P + R A +++ GD+ IP G+ + + +R
Sbjct: 275 DVLDELRTTPESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANR 334
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P + +P+ D HR V F LG C+G+ A + + + +L
Sbjct: 335 DPARFPDPDVLDV---------HRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 83.9 bits (208), Expect = 4e-19
Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 35/180 (19%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D E + +LL AG T + + L HP
Sbjct: 226 LDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHP------------------------ 261
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
+ +++E +R P P + R+ + IPA + ++ +R
Sbjct: 262 AHWDAAAEDPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANR 321
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++P++FDP R + + F G C+G+ A L+ + + I+ R+
Sbjct: 322 DSDAHDDPDRFDPSR-------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 83.0 bits (206), Expect = 7e-19
Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 37/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S EL + LL AGFE + + + LL HP
Sbjct: 226 LSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHP------------------------ 261
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
DQL + L ++E +R R A EV+ G IP +++ + +R
Sbjct: 262 DQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 321
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P+ + +P++FD R+ G++ F G C+G A L+ + + + R+
Sbjct: 322 DPKQFPDPHRFDV---------TRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 83.1 bits (206), Expect = 7e-19
Identities = 34/180 (18%), Positives = 60/180 (33%), Gaps = 36/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ E +LL G +TV M + + LA HP
Sbjct: 219 WTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHP------------------------ 254
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
+ + L DL+ E MR +P ++R+A +V TI G + + +
Sbjct: 255 EDQRLLRERPDLIPAAADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNL 313
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P + P + DR P + +G C+G+ A +++ + L
Sbjct: 314 DPASFEAPEEVRFDR-------GLAPIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGM 366
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 82.6 bits (205), Expect = 8e-19
Identities = 39/179 (21%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MS E++ +V+ + G ETV ++ L HP
Sbjct: 218 MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHP------------------------ 253
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
DQL L DLL + ++E +R P+ R +V+ + + + +R
Sbjct: 254 DQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANR 313
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
P+ ++ P+ FD + R+P + F G R C+GS A Q++ ++ + R
Sbjct: 314 DPRRYDRPDDFDIE---------RDPVPSMSFGAGMRYCLGSYLARTQLRAAVAALARL 363
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 81.9 bits (203), Expect = 2e-18
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ D EL + ++L AG+ET +L + A HP
Sbjct: 238 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP------------------------ 273
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
DQ ++ +L + ++E +R P PV R A + + IP G + + + H
Sbjct: 274 DQWMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAH 333
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+++ + ++FD + + + F GP C+G+ A L++ ++ + R
Sbjct: 334 RDPRVFADADRFDITV--------KREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 385
Query: 182 Y 182
Sbjct: 386 L 386
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 81.5 bits (202), Expect = 2e-18
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 40/190 (21%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ + E++ + LL AG ET + +L + L HP
Sbjct: 223 LEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP------------------- 263
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFI 117
+Q+ L ++ V++E +R + I R A +++ G TI AG ++ + I
Sbjct: 264 -----EQIDVLLRDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSI 318
Query: 118 YGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 177
++R + + NP+ FD RN +V F G C+G A +++ +
Sbjct: 319 TLMNRDAKAYENPDIFDA---------RRNARHHVGFGHGIHQCLGQNLARAELEIALGG 369
Query: 178 ILRRYKILPG 187
+ R +PG
Sbjct: 370 LFAR---IPG 376
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 81.1 bits (201), Expect = 4e-18
Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 40/181 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S+ +L+ LL G + S LA
Sbjct: 217 LSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDI------------------------ 252
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ +RL +L+ + E +R + P + R EV GD T+ G + ++
Sbjct: 253 ELRRRLIAHPELIPNAVDELLRFYG--PAMVGRLVTQEVTVGDITMKPGQTAMLWFPIAS 310
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R +++P+ R P+ ++ G C+G+ ++ + I+ L+R
Sbjct: 311 RDRSAFDSPDNIVI---------ERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKR 361
Query: 182 Y 182
Sbjct: 362 I 362
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 81.2 bits (201), Expect = 4e-18
Identities = 33/181 (18%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S +EL+ + +++ AG +T +++ + ++ L P
Sbjct: 239 LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP------------------------ 274
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ L+ + L+ + E +R + R A +++ +I G + + I
Sbjct: 275 EALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSAL 334
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R +++ P+ FD R+ S + + GP C G A L+ + + TI RR
Sbjct: 335 RDGTVFSRPDVFDV---------RRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRR 385
Query: 182 Y 182
+
Sbjct: 386 F 386
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 80.1 bits (198), Expect = 8e-18
Identities = 25/172 (14%), Positives = 53/172 (30%), Gaps = 37/172 (21%)
Query: 15 EMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRL-- 72
+ L AG E ++ ++ P +R+
Sbjct: 215 PALRALFAGAEMTANTVVDAVLAVSAEP------------------------GLAERIAD 250
Query: 73 --DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNP 130
R + E +RL PA + R+A EV+ G++ I G + + + +R P+++ P
Sbjct: 251 DPAAAQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEP 310
Query: 131 NQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++ D D R + + + + +
Sbjct: 311 DRLDVD---------RPDADRALSAHRGHPGRLEELVTALATAALRAAAKAL 353
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 80.0 bits (198), Expect = 9e-18
Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
++ ELL LL AG ET + + + + L HP
Sbjct: 248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP------------------------ 283
Query: 67 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
DQL L LL ++E +R P R V IPAG ++ + + H
Sbjct: 284 DQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAH 343
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P+ + +P++FD R+ +G++ F G CIG+ A L+ + + +L R
Sbjct: 344 RTPERFPDPHRFDI---------RRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
Query: 182 Y 182
Sbjct: 395 C 395
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 79.7 bits (197), Expect = 1e-17
Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 40/181 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
++ E LL G +TV+ S ++ LA P
Sbjct: 234 ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSP------------------------ 269
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ Q L + + +E +R F V R + + + G I +
Sbjct: 270 EHRQELIERPERIPAACEELLRRFS--LVADGRILTSDYEFHGVQLKKGDQILLPQMLSG 327
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
+ P D R + F G C+G A ++ T+ L R
Sbjct: 328 LDERENACPMHVDFS---------RQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTR 378
Query: 182 Y 182
Sbjct: 379 I 379
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 79.6 bits (197), Expect = 1e-17
Identities = 37/180 (20%), Positives = 63/180 (35%), Gaps = 37/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+SD EL+ E + +L G ET S L +
Sbjct: 215 LSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNR------------------------ 250
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
DQ L LL I+E +R + R + + + AG + + +
Sbjct: 251 DQWDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANF 310
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++ P +FD RNP+ ++ F G C+G++ A L++ +LRR
Sbjct: 311 DEAVFCEPEKFDV---------QRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRL 361
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 79.6 bits (197), Expect = 1e-17
Identities = 37/191 (19%), Positives = 66/191 (34%), Gaps = 40/191 (20%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ +SD V+ AG + + LI L P
Sbjct: 213 PAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP------------------- 253
Query: 62 SAPTYDQLQRL----DLLTRVIKETMR-LFPAAPVIARSAPYEVQCGDYTIPAGASIAIF 116
L +L+ ++E +R A + R A ++Q GD + G + +
Sbjct: 254 -----QLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVL 308
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ G + P+ + NP + DR NP+ ++ F G C GS + I
Sbjct: 309 LEGANFDPEHFPNPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIE 360
Query: 177 TILRRYKILPG 187
+L++ +PG
Sbjct: 361 ALLKK---MPG 368
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 79.6 bits (197), Expect = 1e-17
Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 38/181 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S EL+ + LL AG ET + + ++ L HP
Sbjct: 221 LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHP------------------------ 256
Query: 67 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
DQ + L L++ ++E +R P + R +V TIPAG + + + +
Sbjct: 257 DQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAAN 316
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P++ D R+ SG V F G C+G++ A L+ + I +
Sbjct: 317 RDADWMPEPDRLDIT---------RDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFAD 367
Query: 182 Y 182
Sbjct: 368 R 368
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 78.9 bits (195), Expect = 2e-17
Identities = 36/186 (19%), Positives = 64/186 (34%), Gaps = 41/186 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+D EL V ++ AG + + M L ++ + HP
Sbjct: 221 ATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHP------------------------ 256
Query: 67 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+Q+ R + E +R R A ++ I G S+ + +
Sbjct: 257 EQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAAN 316
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P L + ++ D R P +V F G C+G+ A L+++T + + RR
Sbjct: 317 RDPALAPDVDRLDV---------TREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRR 367
Query: 182 YKILPG 187
P
Sbjct: 368 ---FPA 370
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 78.9 bits (195), Expect = 2e-17
Identities = 34/181 (18%), Positives = 57/181 (31%), Gaps = 40/181 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
M D L + LL G +TV+ +I L+ HP
Sbjct: 241 MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHP------------------------ 276
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+ + + L R ++E R F V AR +++ + G I +
Sbjct: 277 ETVAEMRREPLKLQRGVEELFRRFA--VVSDARYVVSDMEFHGTMLKEGDLILLPTALHG 334
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
+ ++P D R + F+ GP C G A L++ + L R
Sbjct: 335 LDDRHHDDPMTVDL---------SRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLAR 385
Query: 182 Y 182
Sbjct: 386 I 386
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 78.4 bits (194), Expect = 3e-17
Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 42/187 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+++ + H + LL AG ++V + ++LLA HP
Sbjct: 226 LTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHP------------------------ 261
Query: 67 DQLQRL----DLLTRVIKETMRLFPAA--PVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
DQ D++ R ++E +R A + R A +++ G TI AG + +
Sbjct: 262 DQRAAALADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLP 321
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+ + + P +FD R P+ ++ F G CIG+ A L+++T + +
Sbjct: 322 NFDERAFTGPEEFDA---------ARTPNPHLTFGHGIWHCIGAPLARLELRTMFTKLFT 372
Query: 181 RYKILPG 187
R LP
Sbjct: 373 R---LPE 376
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 78.0 bits (193), Expect = 4e-17
Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 39/191 (20%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ ++ + + LL AG T++ M +L + LA HP
Sbjct: 220 VKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHP------------------- 260
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIF 116
DQL +L L + ++E R +A I R+A +V GD + A I
Sbjct: 261 -----DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 315
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+R +++ NP++F+ +R P + F G CI A ++ T S
Sbjct: 316 NQSANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFS 368
Query: 177 TILRRYKILPG 187
T+ ++ P
Sbjct: 369 TLYQK---FPD 376
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 78.1 bits (193), Expect = 4e-17
Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 37/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
++ ++L ++L G ET + + LA P
Sbjct: 239 LTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVP------------------------ 274
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
L L + V++E +R A + R +V +P+G + ++ +R
Sbjct: 275 GLLTALRDGSADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANR 334
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P +++P+ F P R P+ ++ F G C+GS A +++ + + R
Sbjct: 335 DPAEFDDPDTFLPG---------RKPNRHITFGHGMHHCLGSALARIELSVVLRVLAERV 385
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 78.1 bits (193), Expect = 4e-17
Identities = 34/180 (18%), Positives = 55/180 (30%), Gaps = 38/180 (21%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
++ + + LL G +TV+ S +I LA HP
Sbjct: 240 IAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHP------------------------ 275
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
+ + L L R +E R FP AR + + + G I +
Sbjct: 276 ELVAELRSDPLKLMRGAEEMFRRFPVV-SEARMVAKDQEYKGVFLKRGDMILLPTALHGL 334
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P + D R + F GP C G A +++ T+ L+R
Sbjct: 335 DDAANPEPWKLDF---------SRRSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRI 385
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 78.1 bits (193), Expect = 5e-17
Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 43/187 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+ + E + L G + + +LL
Sbjct: 230 VGETEAVGLAGPLQIGGEAVTHNVGQMLYLLLT-RR------------------------ 264
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIA--RSAPYEVQCGDYTIPAGASIAIFIYGL 120
+ + R+ + E +R + R A +V+ I AG + +
Sbjct: 265 ELMARMRERPGARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAA 324
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+R P ++ +P++ D R+P+ ++ + G C G+ A +Q + + T+L
Sbjct: 325 NRDPDVFPDPDRIDL---------DRDPNPHLAYGNGHHFCTGAVLARMQTELLVDTLLE 375
Query: 181 RYKILPG 187
R LPG
Sbjct: 376 R---LPG 379
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 77.7 bits (192), Expect = 5e-17
Identities = 41/186 (22%), Positives = 64/186 (34%), Gaps = 41/186 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
++D EL +L+ G ETV M ++ L +P
Sbjct: 230 VTDEELKGLCTALILGGVETVAGMIGFGVLALLDNP------------------------ 265
Query: 67 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
Q++ L + RV+ E +R P R A +V I AG + I +
Sbjct: 266 GQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMAN 325
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R L +P+ D +R V F G C+G+ A ++ T+ RR
Sbjct: 326 RDEALTPDPDVLDA---------NRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRR 376
Query: 182 YKILPG 187
PG
Sbjct: 377 ---FPG 379
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 77.7 bits (192), Expect = 5e-17
Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 42/192 (21%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
DQ++S+S++ELL + LL AG+E+ + + LL P
Sbjct: 234 DQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRP------------------- 274
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLFPAAP--VIARSAPYEVQCGDYTIPAGASIAI 115
+ ++L +L+ ++E R P R A +V TI AG +
Sbjct: 275 -----ELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLA 329
Query: 116 FIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTI 175
+R + + ++ D R P+ ++ F G C+G+ A ++++ +
Sbjct: 330 STGAANRDQAQFPDADRIDV---------DRTPNQHLGFGHGVHHCLGAPLARVELQVAL 380
Query: 176 STILRRYKILPG 187
+L+R LPG
Sbjct: 381 EVLLQR---LPG 389
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 77.7 bits (192), Expect = 5e-17
Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+++ +LL + +NAG ET M +L+ +LL P
Sbjct: 229 LVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRP------------------- 269
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIF 116
+ L DL+ + E +R+ A + R A +++ T+PA +
Sbjct: 270 -----ELPAELRKDPDLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIAL 324
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ G + P+ +++P + D HR + +V F G C+G A L+++ +
Sbjct: 325 LAGANHDPEQFDDPERVDF---------HRTDNHHVAFGYGVHQCVGQHLARLELEVALE 375
Query: 177 TILRRYKILPG 187
T+LRR +P
Sbjct: 376 TLLRR---VPT 383
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 77.3 bits (191), Expect = 7e-17
Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 41/191 (21%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
Q ++ L+ LL AG ET M SL ++ L HP
Sbjct: 225 RQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHP------------------- 265
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIF 116
+QL + ++E +R F A V +R A +V+ G +I AG + +
Sbjct: 266 -----EQLTVVKANPGRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVS 320
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ + P ++ +P D R ++ F GP C+G A ++++
Sbjct: 321 MLSANWDPAVFKDPAVLDV---------ERGARHHLAFGFGPHQCLGQNLARMELQIVFD 371
Query: 177 TILRRYKILPG 187
T+ RR +P
Sbjct: 372 TLFRR---IPS 379
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 76.9 bits (190), Expect = 1e-16
Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 41/191 (21%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ EL+ + LL AG ET MTSL++I L HP
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHP------------------- 264
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIF 116
+Q L L+ ++E +R A + R A +++ I AG + +
Sbjct: 265 -----EQYAALRADRSLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVV 319
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+R ++ +P+ D HR+ ++ F G C+G A L+++ ++
Sbjct: 320 NSIANRDGTVYEDPDALDI---------HRSARHHLAFGFGVHQCLGQNLARLELEVILN 370
Query: 177 TILRRYKILPG 187
++ R +P
Sbjct: 371 ALMDR---VPT 378
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 76.9 bits (190), Expect = 1e-16
Identities = 43/191 (22%), Positives = 66/191 (34%), Gaps = 41/191 (21%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D + D L++ +LL A +T M L LL P
Sbjct: 217 DPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP------------------- 257
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIF 116
DQL L L+ ++E +R R A +V+ G I G +
Sbjct: 258 -----DQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAH 312
Query: 117 IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 176
+ P P +FD R P+ ++ F G CIG + A ++++
Sbjct: 313 VLAADFDPAFVEEPERFDI---------TRRPAPHLAFGFGAHQCIGQQLARIELQIVFE 363
Query: 177 TILRRYKILPG 187
T+ RR LPG
Sbjct: 364 TLFRR---LPG 371
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 76.1 bits (188), Expect = 2e-16
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 43/187 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
++ E + V L G + +LL+ P
Sbjct: 227 ITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLS-RP------------------------ 261
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPV--IARSAPYEVQCGDYTIPAGASIAIFIYGL 120
+ +RL ++ R I E +R P ++R A +V+ I AG ++ +
Sbjct: 262 ELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAA 321
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+R P+++ +P++ D R+P+ +V F GP C G A L+ + + +L
Sbjct: 322 NRDPEVFPDPDRIDF---------ERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLD 372
Query: 181 RYKILPG 187
R +PG
Sbjct: 373 R---VPG 376
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 75.4 bits (186), Expect = 4e-16
Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 41/183 (22%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S EL ++ +++AG+ET + + + L P
Sbjct: 227 LSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRP------------------------ 262
Query: 67 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSA--PYEVQCGDYTIPAGASIAIFIYG 119
DQL + V++ET+R + R A + G TI G I
Sbjct: 263 DQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDG-RTIARGEPILASYAA 321
Query: 120 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+RHP + + FD R ++ F G C+G+ A +++ + ++
Sbjct: 322 ANRHPDWHEDADTFDA---------TRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLF 372
Query: 180 RRY 182
R+
Sbjct: 373 GRF 375
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 74.6 bits (184), Expect = 7e-16
Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ + ++D E++ + ++ AG ET + + ++ L+ HP
Sbjct: 222 ENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP------------------- 262
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIF 116
+Q + + V++ET+R P + V+ R A +V GD IPAG ++ +
Sbjct: 263 -----EQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVS 317
Query: 117 IYGLHRHPQLWN-NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTI 175
L R + ++FD R S + H + F GP C G+ + ++ +
Sbjct: 318 YGALGRDERAHGPTADRFDLTR--TSGNRH------ISFGHGPHVCPGAALSRMEAGVAL 369
Query: 176 STILRRY 182
+ R+
Sbjct: 370 PALYARF 376
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 73.4 bits (181), Expect = 1e-15
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 37/179 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+SD E L ++ LL AG ET + S ++I
Sbjct: 194 LSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN------------------------ 229
Query: 67 DQLQRL---DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 123
QR+ +L + I+E +R P R V+ GD TI G + ++I +R
Sbjct: 230 -LWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRD 288
Query: 124 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+++++ +F PD RNP+ ++ F G C+G+ A L+ + I +R+
Sbjct: 289 EEVFHDGEKFIPD---------RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 73.0 bits (180), Expect = 2e-15
Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 46/186 (24%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+SD EL L E + ++ ++LL HP
Sbjct: 211 ISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHP------------------------ 246
Query: 67 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
DQ+ L +L+ +E +R R A +V+ I AG + + +
Sbjct: 247 DQMALLREKPELIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATN 306
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 181
R P ++FD R + ++ F G CIG+ A LQ++ + ++ R
Sbjct: 307 RAP-----GDRFDI---------TREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGR 352
Query: 182 YKILPG 187
P
Sbjct: 353 ---FPS 355
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 72.0 bits (177), Expect = 6e-15
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 37/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
MSDR+ + +AG +T ++ + LA P
Sbjct: 274 MSDRDTAGYYIITASAGHDTTSASSAGAALALARDP------------------------ 309
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
D R+ +LL +++E +R R+A + + I AG + + +
Sbjct: 310 DLFARVKADRNLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANH 369
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
P + P +FDP R + ++ F G C+G A L+M+ + +L R
Sbjct: 370 DPAQFPEPRKFDPT---------RPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRV 420
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 71.5 bits (176), Expect = 8e-15
Identities = 28/178 (15%), Positives = 64/178 (35%), Gaps = 36/178 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S+ E + L+ AG ET + + ++
Sbjct: 195 LSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLY------------------------- 229
Query: 67 DQLQRL--DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
+ + + ++E +R P R +V+ D I G + ++I +R
Sbjct: 230 NSWDYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDE 289
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
+++ +P+ F P R P+ ++ F G C+G+ A L+ + + +++
Sbjct: 290 EVFKDPDSFIP---------DRTPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKF 338
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 71.5 bits (176), Expect = 9e-15
Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
M+ E L ++ L+ G +T + ++ L +P
Sbjct: 250 MTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNP------------------------ 285
Query: 67 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 122
DQ +L L+ ++ E +R + R+A + + G TI G + ++ Y +R
Sbjct: 286 DQFAKLKANPALVETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNR 345
Query: 123 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++ + P +F DR P ++ F G C+G++ A +Q++ IL R+
Sbjct: 346 DDEVIDRPEEFIIDR--------PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 71.1 bits (175), Expect = 9e-15
Identities = 28/178 (15%), Positives = 65/178 (36%), Gaps = 36/178 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
++ E + ++ L+ G ET + + ++ +P
Sbjct: 173 LTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENP------------------------ 208
Query: 67 DQLQRL-DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
D + + ++ET+R + P + R A + + I G + +++ +R
Sbjct: 209 DIIDDALKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDE 268
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 182
++ P+ F R + H + F +G C+G+ A L+ ++ IL +
Sbjct: 269 TFFDEPDLFKIGR----REMH------LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 71.2 bits (175), Expect = 1e-14
Identities = 36/185 (19%), Positives = 69/185 (37%), Gaps = 37/185 (20%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
N + D+ + V++ AG +T + +I L+ +P
Sbjct: 247 LDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNP------------------- 287
Query: 62 SAPTYDQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFI 117
+QL L+ R++ E +R R+A + + I G I +
Sbjct: 288 -----EQLALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSY 342
Query: 118 YGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 177
+R ++++NP++FD R P+ ++ F G C+G A L+MK
Sbjct: 343 PSANRDEEVFSNPDEFDIT---------RFPNRHLGFGWGAHMCLGQHLAKLEMKIFFEE 393
Query: 178 ILRRY 182
+L +
Sbjct: 394 LLPKL 398
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 68.9 bits (169), Expect = 7e-14
Identities = 31/182 (17%), Positives = 67/182 (36%), Gaps = 39/182 (21%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S RE+ + L+ AG ET + ++ L+ +P
Sbjct: 259 LSSREIASFFILLVVAGNETTRNAITHGVLALSRYP------------------------ 294
Query: 67 DQLQRL-----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 121
+Q R L ++E +R + R+ +++ + AG ++++ +
Sbjct: 295 EQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSAN 354
Query: 122 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFS-LGPRGCIGSKYAMLQMKTTISTILR 180
R + +P FD RNP+ ++ F G C+G+ A +++ + R
Sbjct: 355 RDESKFADPWTFDLA---------RNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRR 405
Query: 181 RY 182
+
Sbjct: 406 QM 407
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 68.5 bits (168), Expect = 9e-14
Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 36/179 (20%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+SD E +V L AG ET + ++ A HP
Sbjct: 253 LSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHP------------------------ 288
Query: 67 DQLQRL--DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
DQ + E +R R+A + + I G + +F +
Sbjct: 289 DQWELYKKVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDE 348
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFS-LGPRGCIGSKYAMLQMKTTISTILRRY 182
+++ +P F+ RNP+ +V F G CIG+ A + + + +
Sbjct: 349 EVFQDPFTFNIL---------RNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHM 398
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 45.2 bits (106), Expect = 7e-06
Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 69/231 (29%)
Query: 11 ELLHEMVSLLNAGFETVMFMTSLTLI---LLAIHPSVQEEVYNELQDVLGDSPDSAP-TY 66
E + + ++ + ++ V T+I L + P+ ++++ L V P SA
Sbjct: 335 ESIRDGLATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS-VF---PPSAHIPT 389
Query: 67 DQLQRL--DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR-- 122
L + D++ + + ++ + + TI I ++
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK------ESTI--------SIPSIYLEL 435
Query: 123 ----------HPQL---WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAML 169
H + +N P FD D +P Y +G + +
Sbjct: 436 KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD-----QYFYSHIG--------HHLK 482
Query: 170 QMKTTISTILRRYKILPGDKCKSLQD-------IRYSGDLWTSPTKVASFL 213
++ R + D IR+ W + + + L
Sbjct: 483 NIEHP-----ERMTLFR----MVFLDFRFLEQKIRHDSTAWNASGSILNTL 524
Score = 43.3 bits (101), Expect = 3e-05
Identities = 48/279 (17%), Positives = 82/279 (29%), Gaps = 95/279 (34%)
Query: 4 RNSMSDRELLHEMVS-------------LLNAGFETV-MFMTSL-----TLILLAIH--- 41
++ +S E+ H ++S LL+ E V F+ + ++ I
Sbjct: 43 KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ 102
Query: 42 --PSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI------- 92
PS+ +Y E +D L + Y + RL ++ + + L PA V+
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKY-NVSRLQPYLKLRQALLELRPAKNVLIDGVLGS 161
Query: 93 -----ARSAPYEVQCGDYTIPAGASIAIF-I-YGLHRHP-----QLWNNPNQFDPDRFLP 140
A C Y + IF + P L Q DP+ +
Sbjct: 162 GKTWVALDV-----CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN-WTS 215
Query: 141 SQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL--RRYK----ILPGD------ 188
N K + ++ + +L + Y+ +L
Sbjct: 216 RSDHSSNI----------------KLRIHSIQAELRRLLKSKPYENCLLVL--LNVQNAK 257
Query: 189 -------KCKSLQDIRYSGDLWTSPTKVASFLEFKTETE 220
CK L L T +V FL T T
Sbjct: 258 AWNAFNLSCKIL--------LTTRFKQVTDFLSAATTTH 288
Score = 29.8 bits (66), Expect = 0.90
Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 43/157 (27%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYN-------------- 50
+S + + +H + + L ++ + L L+L V N
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCL-LVL--------LNVQNAKAWNAFNLSCKIL 269
Query: 51 ------ELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA---PYEVQ 101
++ D L + + + D LT E L + P EV
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHS--MTLTP--DEVKSLL--LKYLDCRPQDLPREV- 322
Query: 102 CGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 138
T P ++I + W+N + D+
Sbjct: 323 LT--TNPR--RLSIIAESIRDGLATWDNWKHVNCDKL 355
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.0 bits (74), Expect = 0.034
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 9/34 (26%)
Query: 68 QLQRLDLLTRVIKETMRLF-P-AAPVIARSAPYE 99
L++L +++L+ +AP +A A E
Sbjct: 21 ALKKLQ-------ASLKLYADDSAPALAIKATME 47
Score = 30.7 bits (68), Expect = 0.21
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 12/40 (30%)
Query: 45 QEEVYNELQDVLGD-SPDSAPTYDQLQRLDLLTRVIKETM 83
+++ +LQ L + DSAP L IK TM
Sbjct: 18 EKQALKKLQASLKLYADDSAPA---------LA--IKATM 46
>2cb4_A Mosquitocidal toxin; ADP-ribosyltransferase; 2.50A {Bacillus
sphaericus} PDB: 2cb6_A
Length = 291
Score = 29.5 bits (65), Expect = 0.90
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 115 IFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTT 174
IF+ G P++ N D L + +PS +V + +G + +
Sbjct: 89 IFLNGFI--PRVTNQNLSPVEDTHLLNYLRTNSPSIFVSTTRARYNNLGLEITPWTPHSA 146
Query: 175 ISTILRRYKI 184
+ I+ RY+I
Sbjct: 147 NNNIIYRYEI 156
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 29.6 bits (66), Expect = 1.1
Identities = 38/237 (16%), Positives = 68/237 (28%), Gaps = 108/237 (45%)
Query: 38 LAIHPS-VQEEVYNELQDVLGDSPDSAPTY---------DQLQRLDLLTRVIKETMRLFP 87
++ PS +++ + N + P+ +Q+Q + +T P
Sbjct: 317 TSLPPSILEDSLENN---------EGVPSPMLSISNLTQEQVQDY------VNKTNSHLP 361
Query: 88 AAPVIARS---APYE-VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD----P---- 135
A + S V G P + +YGL+ + P+ D P
Sbjct: 362 AGKQVEISLVNGAKNLVVSG----PPQS-----LYGLNLTLRKAKAPSGLDQSRIPFSER 412
Query: 136 -----DRFLP-SQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
+RFLP + PF S + I + L +
Sbjct: 413 KLKFSNRFLPVA----------SPFH--------SHL----LVPASDLINKD---LVKNN 447
Query: 190 C----KSLQ----------DIR-YSGDL--------------WTSPTKVAS--FLEF 215
K +Q D+R SG + W + T+ + L+F
Sbjct: 448 VSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDF 504
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex,
oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus
horikoshii}
Length = 382
Score = 29.1 bits (66), Expect = 1.3
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 55 VLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPA 88
+ G + PTYD + L V ++ PA
Sbjct: 261 IGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPA 294
>1vq0_A 33 kDa chaperonin; TM1394, joint center for structural genomics,
protein structure initiative, PSI, chaperone; HET: UNL;
2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1
Length = 302
Score = 28.4 bits (64), Expect = 1.8
Identities = 8/46 (17%), Positives = 21/46 (45%)
Query: 46 EEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV 91
+E ++ + + P + + + + LD+L R+ E + A +
Sbjct: 194 QEKVEMIEKNIKNLPSISKLFQEAEPLDVLERIFGEKVGFVETAEI 239
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme,
electron transfer, folate-ME enzyme, oxidoreductase;
HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia}
PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B*
3ada_B*
Length = 405
Score = 28.4 bits (64), Expect = 2.1
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 55 VLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPA 88
V+G DS Y Q ++ + + LFP
Sbjct: 282 VMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPI 315
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics,
D-alanyl-lipoteichoic acid biosynthesis structure
initiative, PSI-2; 2.24A {Streptococcus pneumoniae}
Length = 407
Score = 26.9 bits (59), Expect = 6.2
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 135 PDRFLPSQSSHRNPSGYVPFSLGPRGC 161
D P+ + + Y P+ LG G
Sbjct: 55 FDGAHPAVLAEKYNRSYRPYLLGQGGA 81
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll,
selenomethionine; 1.90A {Xanthomonas citri} SCOP:
b.18.1.13 c.69.1.21
Length = 615
Score = 26.7 bits (58), Expect = 8.6
Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 104 DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHR 146
++T G + + + P NP + P+ F ++
Sbjct: 553 NHTFQPGHRVMVQVQS-SLFPLYDRNPQTYVPNIFFAKPGDYQ 594
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.135 0.405
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,399,043
Number of extensions: 192987
Number of successful extensions: 667
Number of sequences better than 10.0: 1
Number of HSP's gapped: 479
Number of HSP's successfully gapped: 88
Length of query: 225
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 135
Effective length of database: 4,188,903
Effective search space: 565501905
Effective search space used: 565501905
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (24.9 bits)