RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16715
(225 letters)
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 139 bits (349), Expect = 2e-39
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSP 60
+ ++SD EL+ + + + AG+ET + S + LA HP VQ+++ E+ VL +
Sbjct: 257 TESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA 316
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
PTYD + +++ L V+ ET+RLFP A + R +V+ IP G + I Y L
Sbjct: 317 P--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 374
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
HR P+ W P +F P+RF + +P Y PF GPR CIG ++A++ MK + +L+
Sbjct: 375 HRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQ 434
Query: 181 RYKILPGDKCKSLQDIRYSGDLW 203
+ P + + + G L
Sbjct: 435 NFSFKPCKETQIPLKLSLGGLLQ 457
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 135 bits (340), Expect = 4e-38
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 3/209 (1%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
D + + L+ ++SL AG ET +L+ +P V E V E++ V+G
Sbjct: 251 DPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG--SH 308
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA-PYEVQCGDYTIPAGASIAIFIYGL 120
P D ++ VI E RL P + Q Y IP + +
Sbjct: 309 RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSA 368
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
P+ + PN F+P FL + + + G++PFSLG R C+G A ++ +TIL+
Sbjct: 369 LHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 428
Query: 181 RYKILPGDKCKSLQDIRYSGDLWTSPTKV 209
+ I + + + P
Sbjct: 429 NFSIASPVPPEDIDLTPRESGVGNVPPSY 457
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 134 bits (338), Expect = 6e-38
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 7/208 (3%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSP 60
D ++ S L+ + L+ AG ET + ++ +A++P++Q +V E+ ++G P
Sbjct: 250 NDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG--P 307
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYG 119
+ P++D ++ V+ E +R P+ I + + Y+IP G ++ +Y
Sbjct: 308 NGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYS 367
Query: 120 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+H + W +P F P+RFL S VPFSLG R C+G A ++M + +L
Sbjct: 368 VHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALL 427
Query: 180 RRYKI-LPGDKCKSLQDIRYSGDLWTSP 206
+R+ + P + + D++ + P
Sbjct: 428 QRFHLHFPHEL---VPDLKPRLGMTLQP 452
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 118 bits (296), Expect = 7e-32
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSP 60
+Q + + L + V L AG ET L+LL HP V +V E++ V+G
Sbjct: 251 HNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGR-- 308
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAP-YEVQCGDYTIPAGASIAIFIYG 119
+ +P + V+ E R P A +++ +Y IP G +I I +
Sbjct: 309 NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTS 368
Query: 120 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
+ + + NP FDP FL + + ++PFS G R C+G A +++ +++IL
Sbjct: 369 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSIL 428
Query: 180 RRYKILPGDKCKSLQDIRYSGDLWTSPTKV 209
+ + + K+L + P
Sbjct: 429 QNFNLKSLVDPKNLDTTPVVNGFASVPPFY 458
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 97.5 bits (241), Expect = 3e-24
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 2 DQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPD 61
+ + D + +++++ L AG ET + S L L +P V ++ E V D
Sbjct: 242 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV---LVD 298
Query: 62 SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA-PYEVQCGDYTIPAGASIAIFIYGL 120
P+Y Q+++L + V+ E +RL+P AP + A V G+Y + G + + I L
Sbjct: 299 PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQL 358
Query: 121 HRHPQLW-NNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 179
HR +W ++ +F P+RF S + PF G R CIG ++A+ + + +L
Sbjct: 359 HRDKTIWGDDVEEFRPERFENP--SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMML 416
Query: 180 RRYKILPGDK 189
+ +
Sbjct: 417 KHFDFEDHTN 426
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 87.9 bits (216), Expect = 6e-21
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 96 APYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFS 155
A + + I G I + +R ++++NP++FD RF P+ ++ F
Sbjct: 321 ALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF---------PNRHLGFG 371
Query: 156 LGPRGCIGSKYAMLQMKTTISTILRRYKIL 185
G C+G A L+MK +L + K +
Sbjct: 372 WGAHMCLGQHLAKLEMKIFFEELLPKLKSV 401
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 84.2 bits (206), Expect = 2e-19
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 99 EVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL-PSQSSHRNPSGYVPFSLG 157
E + + I G +A +R P+ + +P+ F P R+ P Q N ++PF G
Sbjct: 327 EFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAG 386
Query: 158 PRGCIGSKYAMLQMKTTISTILRRYKI 184
C+G+ +A++Q+K S +LR Y+
Sbjct: 387 RHRCVGAAFAIMQIKAIFSVLLREYEF 413
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 82.8 bits (203), Expect = 3e-19
Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 75 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 134
++E R +P P + + + G S+ + +YG + P+LW++P++F
Sbjct: 271 REMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 330
Query: 135 PDRFLPSQSSHRNPSGYVPFSLG----PRGCIGSKYAMLQMKTTISTILRRYKILPGDK 189
P+RF N +P G C G + MK ++ ++ + + ++
Sbjct: 331 PERFAE---REENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQ 386
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 81.8 bits (200), Expect = 8e-19
Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 29/179 (16%)
Query: 7 MSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTY 66
+S EL + LL AGFE + + + LL HP V + + +
Sbjct: 224 LSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEE----- 278
Query: 67 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 126
+R R A EV+ G IP +++ + +R P+
Sbjct: 279 ---------------ILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQ 323
Query: 127 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 185
+ +P++FD R G++ F G C+G A L+ + + + R+ L
Sbjct: 324 FPDPHRFDVTRD---------TRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL 373
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 81.0 bits (198), Expect = 2e-18
Identities = 27/181 (14%), Positives = 59/181 (32%), Gaps = 27/181 (14%)
Query: 5 NSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAP 64
+ +S EL ++ +++AG+ET + + + L P V ++
Sbjct: 219 DRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLR 278
Query: 65 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 124
++ + + TI G I +RHP
Sbjct: 279 HEPAVKH------------------LPLRYAVTDIALPDGRTIARGEPILASYAAANRHP 320
Query: 125 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 184
+ + FD R + ++ F G C+G+ A +++ + ++ R+
Sbjct: 321 DWHEDADTFDATRTVKE---------HLAFGHGVHFCLGAPLARMEVTLALESLFGRFPD 371
Query: 185 L 185
L
Sbjct: 372 L 372
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 77.2 bits (188), Expect = 3e-17
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 94 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 153
R+A +V GD + A I +R +++ NP++F+ +R P P +
Sbjct: 288 RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-------PQDPLG 340
Query: 154 FSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
F G CI A ++ T ST+ +++
Sbjct: 341 FGFGDHRCIAEHLAKAELTTVFSTLYQKFP 370
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 74.9 bits (182), Expect = 2e-16
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 97 PYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSL 156
+V+ I AG ++ + +R P+++ +P++ D +R +P+ +V F
Sbjct: 291 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER---------SPNPHVSFGF 341
Query: 157 GPRGCIGSKYAMLQMKTTISTILRRYK 183
GP C G A L+ + + +L R
Sbjct: 342 GPHYCPGGMLARLESELLVDAVLDRVP 368
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 74.8 bits (182), Expect = 2e-16
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+ + F P+RFL + + Y PF LG R C+G +A+L+ + R
Sbjct: 298 VTQRLHFPDGEAFRPERFLEERGTPSGR--YFPFGLGQRLCLGRDFALLEGPIVLRAFFR 355
Query: 181 RYKILPGDKCKSLQDI 196
R+++ P + L +
Sbjct: 356 RFRLDPLPFPRVLAQV 371
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 73.3 bits (178), Expect = 8e-16
Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 83 MRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQ 142
L R A ++ I G S+ + +R P L + ++ D R
Sbjct: 274 RYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR----- 328
Query: 143 SSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 185
P +V F G C+G+ A L+++T + + RR+ L
Sbjct: 329 ----EPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPAL 367
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 72.9 bits (177), Expect = 1e-15
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Query: 83 MRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN-NPNQFDPDRFLPS 141
P + V+ R A +V GD IPAG ++ + L R + ++FD R
Sbjct: 277 RFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRT--- 333
Query: 142 QSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 185
+ + ++ F GP C G+ + ++ + + R+ L
Sbjct: 334 -----SGNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHL 372
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 72.2 bits (175), Expect = 2e-15
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 96 APYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFS 155
A +++ +I G + + I R +++ P+ FD R S + +
Sbjct: 294 ARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD---------TSASLAYG 344
Query: 156 LGPRGCIGSKYAMLQMKTTISTILRRYKIL 185
GP C G A L+ + + TI RR+ +
Sbjct: 345 RGPHVCPGVSLARLEAEIAVGTIFRRFPEM 374
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 71.7 bits (174), Expect = 3e-15
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 78 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 137
V + L P R A +V I AG + I +R L +P+ D +R
Sbjct: 279 VNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR 338
Query: 138 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 183
V F G C+G+ A ++ T+ RR+
Sbjct: 339 A---------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFP 375
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 71.4 bits (173), Expect = 3e-15
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSP 60
+++SD E L ++ LL AG ET + S ++I
Sbjct: 188 RVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN------------------ 229
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
+ +++ +L + I+E +R P R V+ GD TI G + ++I
Sbjct: 230 ----LWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASA 285
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+R +++++ +F PDR NP+ ++ F G C+G+ A L+ + I +
Sbjct: 286 NRDEEVFHDGEKFIPDR---------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSK 336
Query: 181 RYKILP 186
R++ +
Sbjct: 337 RFRHIE 342
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 70.2 bits (170), Expect = 9e-15
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 97 PYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSL 156
++Q GD + G + + + G + P+ + NP + DR NP+ ++ F
Sbjct: 288 TADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRP--------NPTSHLAFGR 339
Query: 157 GPRGCIGSKYAMLQMKTTISTILRRYK 183
G C GS + I +L++
Sbjct: 340 GQHFCPGSALGRRHAQIGIEALLKKMP 366
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 69.8 bits (169), Expect = 1e-14
Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 98 YEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLG 157
+ + + G I + + P D R + F G
Sbjct: 293 SDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR---------QKVSHTTFGHG 343
Query: 158 PRGCIGSKYAMLQMKTTISTILRRYK 183
C+G A ++ T+ L R
Sbjct: 344 SHLCLGQHLARREIIVTLKEWLTRIP 369
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 68.7 bits (166), Expect = 3e-14
Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 32/189 (16%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSP 60
+++S+ E + L+ AG ET + + ++
Sbjct: 189 KIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYN------------------ 230
Query: 61 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGL 120
R + ++E +R P R +V+ D I G + ++I
Sbjct: 231 -----SWDYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASA 285
Query: 121 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 180
+R +++ +P+ F PDR P+ ++ F G C+G+ A L+ + + +
Sbjct: 286 NRDEEVFKDPDSFIPDR---------TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAK 336
Query: 181 RYKILPGDK 189
++++ K
Sbjct: 337 KFRVKEIVK 345
>d1vq0a1 d.193.1.1 (A:1-230) Heat shock protein 33, Hsp33
{Thermotoga maritima [TaxId: 2336]}
Length = 230
Score = 32.2 bits (73), Expect = 0.028
Identities = 9/57 (15%), Positives = 26/57 (45%)
Query: 35 LILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV 91
+ I ++++E ++ + + P + + + + LD+L R+ E + A +
Sbjct: 171 FAVQIIDRTLEQEKVEMIEKNIKNLPSISKLFQEAEPLDVLERIFGEKVGFVETAEI 227
>d1huwa_ a.26.1.1 (A:) Growth hormone, somatotropin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 191
Score = 28.7 bits (64), Expect = 0.41
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MDQRNSMSDRELLHEMVSLLNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVL 56
++ S+ ELL + L+ + E V F+ S ++ + VY+ L+D+
Sbjct: 64 KEETQQKSNLELLRISLLLIQSWLEPVQFLRS-VFANSLVYGASDSNVYDLLKDLE 118
>d1vzya1 d.193.1.1 (A:1-233) Heat shock protein 33, Hsp33 {Bacillus
subtilis [TaxId: 1423]}
Length = 233
Score = 26.5 bits (58), Expect = 2.2
Identities = 9/73 (12%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 20 LNAGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLGDSPDSAPTYDQ-LQRLDLLTRV 78
+ + + ++ + P +E +++ L + + L ++L V
Sbjct: 159 VGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEV 218
Query: 79 IKETMRLFPAAPV 91
+ E + PV
Sbjct: 219 LGEKPEILETMPV 231
>d1g62a_ d.126.1.1 (A:) Ribosome anti-association factor eIF6 (aIF6)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 224
Score = 24.7 bits (54), Expect = 8.2
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 22 AGFETVMFMTSLTLILLAIHPSVQEEVYNELQDVLG 57
+G V SL+ +HP + EL +L
Sbjct: 143 SGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQ 178
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 24.8 bits (53), Expect = 8.3
Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 8/64 (12%)
Query: 73 DLLTRVIKETMRLFPAAPVIARSAPYEVQ--------CGDYTIPAGASIAIFIYGLHRHP 124
+LL + F A P +A SAP V +P + + G R
Sbjct: 10 ELLAEARRAFREEFGAEPELAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKD 69
Query: 125 QLWN 128
L +
Sbjct: 70 GLVS 73
>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica
charantia) [TaxId: 3673]}
Length = 190
Score = 24.6 bits (53), Expect = 8.6
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 164 SKYAMLQMKTTISTILRRYKILPGDKCKSLQDIR 197
++ I LR + P + KS Q I+
Sbjct: 103 KLAVDMRNNYDIIGALRPHAAGPNGRTKSRQAIK 136
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.405
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 825,460
Number of extensions: 37414
Number of successful extensions: 106
Number of sequences better than 10.0: 1
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 27
Length of query: 225
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 143
Effective length of database: 1,281,736
Effective search space: 183288248
Effective search space used: 183288248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)