BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16716
(141 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 13 PDSAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIY 71
P+ AP TYD + +++ L V+ ET+RLFP A + R +V+ IP G + I Y
Sbjct: 318 PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSY 377
Query: 72 GLHRHPQLWNNPNQFDPDRFLPSQSSHRNP 101
LHR P+ W P +F P+RF + +P
Sbjct: 378 ALHRDPKYWTEPEKFLPERFSKKNKDNIDP 407
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 13 PDSAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIY 71
P+ AP TYD + +++ L V+ ET+RLFP A + R +V+ IP G + I Y
Sbjct: 320 PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSY 379
Query: 72 GLHRHPQLWNNPNQFDPDRFLPSQSSHRNP 101
LHR P+ W P +F P+RF + +P
Sbjct: 380 ALHRDPKYWTEPEKFLPERFSKKNKDNIDP 409
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 13 PDSAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIY 71
P+ AP TYD + +++ L V+ ET+RLFP A + R +V+ IP G + I Y
Sbjct: 319 PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSY 378
Query: 72 GLHRHPQLWNNPNQFDPDRFLPSQSSHRNP 101
LHR P+ W P +F P+RF + +P
Sbjct: 379 ALHRDPKYWTEPEKFLPERFSKKNKDNIDP 408
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E++ V G P + ++ +++L VI E MRL PA V+ R A E + G Y I
Sbjct: 300 IRDEVEAVTGGRPVA---FEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRI 356
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMS 105
PAGA I Y + R P+ +++ +FDPDR+LP ++++ AM
Sbjct: 357 PAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMK 401
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDYT 59
+Y E+ +G S PT RL LL I+E +RL P AP +I A + G++
Sbjct: 310 LYEEIDQNVGFS--RTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFA 367
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL-PSQSSHRNPS 102
+ G + I ++ LH + + W+ P+QF P+RFL P+ + +PS
Sbjct: 368 VDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPS 411
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 9 LGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAI 68
+ + P A T L LL +KET+RL+P + R ++ +Y IPAG + +
Sbjct: 325 ISEHPQKATT-----ELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQV 379
Query: 69 FIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN 100
F+Y L R+ L+ P +++P R+L + S RN
Sbjct: 380 FLYSLGRNAALFPRPERYNPQRWLDIRGSGRN 411
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
LQ + LL IKET+RL P + + R ++ DY IPA + + IY + R P ++
Sbjct: 332 LQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFS 391
Query: 82 NPNQFDPDRFL 92
+P++FDP R+L
Sbjct: 392 SPDKFDPTRWL 402
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 55.5 bits (132), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 3 HELQDVLGDSP----DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGD 57
HELQ ++ D P+Y Q+++L + V+ E +RL+P AP + A + V G+
Sbjct: 285 HELQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 58 YTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
Y + G + + I LHR +W ++ +F P+RF NPSA+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 3 HELQDVLGDSP----DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGD 57
H LQ V ++ D P+Y Q+++L + V+ E +RL+P AP + A + V G+
Sbjct: 285 HVLQKVAEEATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 58 YTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
Y + G + + I LHR +W ++ +F P+RF NPSA+
Sbjct: 345 YPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G I + I
Sbjct: 306 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQ 365
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 366 LHRDKTIWGDDVEEFRPERF-------ENPSAI 391
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
LQ + LL IKET+RL P + + R ++ DY IPA + + IY L R P +
Sbjct: 328 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFF 387
Query: 82 NPNQFDPDRFL 92
+P FDP R+L
Sbjct: 388 DPENFDPTRWL 398
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAI 386
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 303 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 363 LHRDKTIWGDDVEEFRPERF-------ENPSAI 388
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAI 386
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAI 386
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAI 386
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
LQ + LL IKET+RL P + + R ++ DY IPA + + IY L R P +
Sbjct: 331 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFF 390
Query: 82 NPNQFDPDRFL 92
+P FDP R+L
Sbjct: 391 DPENFDPTRWL 401
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 3 HELQDVLGDSP----DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGD 57
HELQ ++ D P++ Q+++L + V+ E +RL+P AP + A + V G+
Sbjct: 286 HELQKAAEEAARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 345
Query: 58 YTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
Y + G + + I LHR +W ++ +F P+RF NPSA+
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF-------ENPSAI 386
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P +P + A + V G+Y + G + + I
Sbjct: 303 DPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 363 LHRDKTIWGDDVEEFRPERF-------ENPSAI 388
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAI 386
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%)
Query: 18 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 77
TYDQL+ L+LL R IKET+RL P ++ R A YTIP G + + R
Sbjct: 305 TYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLK 364
Query: 78 QLWNNPNQFDPDRFL 92
W F+PDR+L
Sbjct: 365 DSWVERLDFNPDRYL 379
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 52.4 bits (124), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P P + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAI 386
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 52.4 bits (124), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P P + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAI 385
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +RL+P P + A + V G+Y + G + + I
Sbjct: 303 DPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 363 LHRDKTIWGDDVEEFRPERF-------ENPSAI 388
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 14 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQC-GDYTIPAGASIAIFIYG 72
D P+Y Q+++L + V+ E +R++P AP + A + G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQ 360
Query: 73 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSAM 104
LHR +W ++ +F P+RF NPSA+
Sbjct: 361 LHRDKTVWGDDVEEFRPERF-------ENPSAI 386
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 31 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 90
VI+ETMR P +++R A ++ G +T+P G ++ + + HR P + P++FDPDR
Sbjct: 292 VIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR 351
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 18 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 77
T + L+++ L +V++E +RL P R + Q + P G ++ I H P
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADP 353
Query: 78 QLWNNPNQFDPDRFLPSQSSHRNP 101
L+ +P +FDP+RF P S+ NP
Sbjct: 354 DLYPDPEKFDPERFTPDGSATHNP 377
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 15 SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGL 73
S TY RL LL I E +RL P P+ + Y IP G + + G
Sbjct: 331 SRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGA 390
Query: 74 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMS 105
H +W P++F PDRFL + NPSA++
Sbjct: 391 HLDETVWEQPHEFRPDRFLEPGA---NPSALA 419
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E+ ++G P+ P++D ++ V+ E +R P+ I + + Y+
Sbjct: 310 VQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 367
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPS 94
IP G ++ +Y +H + W +P F P+RFL S
Sbjct: 368 IPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDS 402
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E+ ++G P+ P++D ++ V+ E +R P+ I + + Y+
Sbjct: 310 VQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 367
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPS 94
IP G ++ +Y +H + W +P F P+RFL S
Sbjct: 368 IPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDS 402
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 45.4 bits (106), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 3 HELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPA 62
E+Q VL D + P + L+ + L +KE+MRL P+ P R+ G+Y +P
Sbjct: 322 QEVQSVLPD--NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPK 379
Query: 63 GASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQ 95
G + + L + + ++F P+R+L +
Sbjct: 380 GTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE 412
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 19 YDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 78
++ L RL L++V+KE++RL+P A R E +P + Y + R
Sbjct: 296 FEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDT 355
Query: 79 LWNNPNQFDPDRFLPSQSSHR 99
+ +P F+PDRF P R
Sbjct: 356 YFEDPLTFNPDRFGPGAPKPR 376
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 43.9 bits (102), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V+ E+ V+G + P ++ ++ + VI E R P+ +AR + + D+
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFF 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
+P G + + + R P ++NP F+P FL + + A
Sbjct: 363 LPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 43.9 bits (102), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V+ E+ V+G + P ++ ++ + VI E R P+ +AR + + D+
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFF 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
+P G + + + R P ++NP F+P FL + + A
Sbjct: 363 LPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 43.9 bits (102), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V+ E+ V+G + P ++ ++ + VI E R P+ +AR + + D+
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFF 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
+P G + + + R P ++NP F+P FL + + A
Sbjct: 363 LPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 43.9 bits (102), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V+ E+ V+G + P ++ ++ + VI E R P+ +AR + + D+
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFF 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
+P G + + + R P ++NP F+P FL + + A
Sbjct: 363 LPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 43.9 bits (102), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V+ E+ V+G + P ++ ++ + VI E R P+ +AR + + D+
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFF 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
+P G + + + R P ++NP F+P FL + + A
Sbjct: 363 LPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 32 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 91
++E R +P P + + + G S+ + +YG + P+LW++P++F P+RF
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Query: 92 LPSQSS 97
+ +
Sbjct: 340 AEREEN 345
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 82 NPNQFDPDRF 91
+P +F P+RF
Sbjct: 328 DPQEFRPERF 337
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDYT 59
+ EL V+G + P +L L I ET R P I S + +
Sbjct: 319 IQKELDTVIGR--ERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFY 376
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTIC 119
IP + + + ++ P+LW +P++F P+RFL + + N ++ + R I
Sbjct: 377 IPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIG 436
Query: 120 NMRASIAIF 128
+ A IF
Sbjct: 437 EVLAKWEIF 445
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 82 NPNQFDPDRF 91
+P +F P+RF
Sbjct: 320 DPQEFRPERF 329
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 82 NPNQFDPDRF 91
+P +F P+RF
Sbjct: 328 DPQEFRPERF 337
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 82 NPNQFDPDRF 91
+P +F P+RF
Sbjct: 320 DPQEFRPERF 329
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 82 NPNQFDPDRF 91
+P +F P+RF
Sbjct: 320 DPQEFRPERF 329
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 82 NPNQFDPDRF 91
+P +F P+RF
Sbjct: 328 DPQEFRPERF 337
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 19 YDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 78
+ +++ +L + I+E +R P R V+ GD TI G + ++I +R +
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 79 LWNNPNQFDPDR 90
++++ +F PDR
Sbjct: 291 VFHDGEKFIPDR 302
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 19 YDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 78
+ +++ +L + I+E +R P R V+ GD TI G + ++I +R +
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 79 LWNNPNQFDPDR 90
++++ +F PDR
Sbjct: 291 VFHDGEKFIPDR 302
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V+ E+ V+G + P ++ ++ VI E R P+ +A + + D+
Sbjct: 305 VHEEIDRVIGK--NRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFF 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
+P G + + + R P+ ++NP F+P FL + + A
Sbjct: 363 LPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDA 406
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 39.7 bits (91), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 19 YDQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 77
YD + + R ++E++R P ++ R EV+ G Y +P G IA H
Sbjct: 309 YDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDE 368
Query: 78 QLWNNPNQFDPDR 90
+ + NP +DP+R
Sbjct: 369 EAFPNPRLWDPER 381
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 39.3 bits (90), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 19 YDQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 77
YD + + R ++E++R P ++ R EV+ G Y +P G IA H
Sbjct: 303 YDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDE 362
Query: 78 QLWNNPNQFDPDR 90
+ + NP +DP+R
Sbjct: 363 EAFPNPRLWDPER 375
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 39.3 bits (90), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 19 YDQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 77
YD + + R ++E++R P ++ R EV+ G Y +P G IA H
Sbjct: 318 YDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDE 377
Query: 78 QLWNNPNQFDPDR 90
+ + NP +DP+R
Sbjct: 378 EAFPNPRLWDPER 390
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 38.1 bits (87), Expect = 0.002, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E+Q V+G+ D +Q+L ++ I E+MR P ++ R A + Y +
Sbjct: 332 IIKEIQTVIGERDIKI---DDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPV 388
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 91
G +I + I +HR + + PN+F + F
Sbjct: 389 KKGTNIILNIGRMHRL-EFFPKPNEFTLENF 418
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 23 QRLDLLTR-------VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+++D+L R V++E +R + I R A +++ G TI AG ++ + I ++R
Sbjct: 264 EQIDVLLRDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNR 323
Query: 76 HPQLWNNPNQFDPDR 90
+ + NP+ FD R
Sbjct: 324 DAKAYENPDIFDARR 338
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGDG--RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 91
G +A +R P+ + +P+ F P R+
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGDG--RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 91
G +A +R P+ + +P+ F P R+
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGDG--RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 91
G +A +R P+ + +P+ F P R+
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGDG--RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 91
G +A +R P+ + +P+ F P R+
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E+ DV+G P + T VI E R P+ + +++ +
Sbjct: 309 VQQEIDDVIGQV--RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFR 366
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
IP G ++ + + + +W P +F P+ FL +Q P A
Sbjct: 367 IPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEA 410
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDYT 59
+ EL V+G S P L + I ET R P I S + +
Sbjct: 316 IQEELDTVIGRS--RRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFY 373
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
IP G + + + ++ +LW NP++F P+RFL
Sbjct: 374 IPKGRCVFVNQWQINHDQKLWVNPSEFLPERFL 406
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E+ DV+G P + T VI E R P+ + +++ +
Sbjct: 309 VQQEIDDVIGQV--RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFR 366
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
IP G ++ + + + +W P +F P+ FL +Q P A
Sbjct: 367 IPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEA 410
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 30 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 89
R + E +RL PA + R+A EV+ G++ I G + + + +R P+++ P++ D D
Sbjct: 257 RTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVD 316
Query: 90 RFLPSQ--SSHRN-PSAMSVIVT 109
R + S+HR P + +VT
Sbjct: 317 RPDADRALSAHRGHPGRLEELVT 339
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 36.2 bits (82), Expect = 0.006, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCG---- 56
V E++ V+G + +P + V+ E R P S P+ V C
Sbjct: 306 VQEEIERVIGR--NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT---SLPHAVTCDIKFR 360
Query: 57 DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
+Y IP G +I I + + + + NP FDP FL
Sbjct: 361 NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL 396
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 36.2 bits (82), Expect = 0.007, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCG---- 56
V E++ V+G + +P + V+ E R P S P+ V C
Sbjct: 304 VQEEIERVIGR--NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT---SLPHAVTCDIKFR 358
Query: 57 DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
+Y IP G +I I + + + + NP FDP FL
Sbjct: 359 NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL 394
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 21 QLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 76
+LQRL L +E +R R+ EV+ G I G + +F+ +R
Sbjct: 271 ELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRD 330
Query: 77 PQLWNNPNQFDPDR 90
P+ W++P+ +D R
Sbjct: 331 PRRWSDPDLYDITR 344
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 35.8 bits (81), Expect = 0.008, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 19 YDQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 77
YD ++ + + +E++R P ++ R VQ G Y +P G IA H+
Sbjct: 304 YDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDE 363
Query: 78 QLWNNPNQFDPDR 90
+ + NP +++P+R
Sbjct: 364 EAFPNPREWNPER 376
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 4/129 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V EL V+G D P L + + E MR PV I + Y
Sbjct: 316 VQAELDQVVGR--DRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYH 373
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTIC 119
IP + + + ++ P W NP FDP RFL + N S ++ + R I
Sbjct: 374 IPKDTVVFVNQWSVNHDPLKWPNPENFDPARFL-DKDGLINKDLTSRVMIFSVGKRRCIG 432
Query: 120 NMRASIAIF 128
+ + +F
Sbjct: 433 EELSKMQLF 441
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 2 YHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIP 61
+ ++ D L +P+S P ++E MR P + R A +++ GD+ IP
Sbjct: 273 HRDVLDELRTTPESTPA------------AVEELMRYDPPVQAVTRWAYEDIRLGDHDIP 320
Query: 62 AGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQ 95
G+ + + +R P + +P+ D R Q
Sbjct: 321 RGSRVVALLGSANRDPARFPDPDVLDVHRAAERQ 354
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 35.4 bits (80), Expect = 0.010, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 21 QLQRLDLLTRVIKETMRLFPAAPVIARSAPYE----VQCGDYTIPAGASIAIFIYGLHRH 76
+L L +L +IKE++RL A+ I R+A + ++ G Y I IA++ +H
Sbjct: 322 ELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 77 PQLWNNPNQFDPDRFL 92
P+++ +P F DR+L
Sbjct: 381 PEIYPDPLTFKYDRYL 396
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 35.4 bits (80), Expect = 0.010, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 21 QLQRLDLLTRVIKETMRLFPAAPVIARSAPYE----VQCGDYTIPAGASIAIFIYGLHRH 76
+L L +L +IKE++RL A+ I R+A + ++ G Y I IA++ +H
Sbjct: 322 ELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 77 PQLWNNPNQFDPDRFL 92
P+++ +P F DR+L
Sbjct: 381 PEIYPDPLTFKYDRYL 396
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 31 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 90
+I E +R+ P R +V+ G I AG+ I I +R P+++++P+ FD R
Sbjct: 269 IINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 328
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 31 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 90
+I E +R+ P R +V+ G I AG+ I I +R P+++++P+ FD R
Sbjct: 267 IINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 326
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+QL +L DL+ ++E +R + AR A ++ TI G + + + +R
Sbjct: 255 EQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANR 314
Query: 76 HPQLWNNPNQFDPDR 90
P ++ NP+ FD R
Sbjct: 315 DPSIFTNPDVFDITR 329
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 34.7 bits (78), Expect = 0.019, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
VY E++ V+G P P ++ VI E R P+ + Y
Sbjct: 305 VYREIEQVIG--PHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYI 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
IP + + + P + P+ F+PD FL + + + A
Sbjct: 363 IPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEA 406
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 34.3 bits (77), Expect = 0.022, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+ + R +E++R P ++ R +V+ G Y +P G IA H + +
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 368
Query: 82 NPNQFDPDR 90
P ++DP+R
Sbjct: 369 EPRRWDPER 377
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 34.3 bits (77), Expect = 0.024, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+ + R +E++R P ++ R +V+ G Y +P G IA H + +
Sbjct: 322 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 381
Query: 82 NPNQFDPDR 90
P ++DP+R
Sbjct: 382 EPRRWDPER 390
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 34.3 bits (77), Expect = 0.025, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+ + R +E++R P ++ R +V+ G Y +P G IA H + +
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 368
Query: 82 NPNQFDPDR 90
P ++DP+R
Sbjct: 369 EPRRWDPER 377
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 34.3 bits (77), Expect = 0.025, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+ + R +E++R P ++ R +V+ G Y +P G IA H + +
Sbjct: 308 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 367
Query: 82 NPNQFDPDR 90
P ++DP+R
Sbjct: 368 EPRRWDPER 376
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 34.3 bits (77), Expect = 0.025, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+ + R +E++R P ++ R +V+ G Y +P G IA H + +
Sbjct: 310 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 369
Query: 82 NPNQFDPDR 90
P ++DP+R
Sbjct: 370 EPRRWDPER 378
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
D+ RL L +E +R R+ +V+ TI G + +F+ +R
Sbjct: 272 DEFARLRADPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANR 331
Query: 76 HPQLWNNPNQFDPDR 90
P+ W++P+++D R
Sbjct: 332 DPRRWDDPDRYDITR 346
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 33.9 bits (76), Expect = 0.033, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E++ V+G +P R+ VI E R P + + +V+ +Y
Sbjct: 302 VQEEIERVIGRH--RSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYF 359
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
IP G I + + + + NP FDP FL
Sbjct: 360 IPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFL 392
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 33.5 bits (75), Expect = 0.036, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 305 VQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS-HRNPSAM 104
IP + + P+ + PN F+P FL + + RN M
Sbjct: 363 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFM 408
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 33.5 bits (75), Expect = 0.036, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 305 VQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS-HRNPSAM 104
IP + + P+ + PN F+P FL + + RN M
Sbjct: 363 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFM 408
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 33.5 bits (75), Expect = 0.036, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 305 VQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS-HRNPSAM 104
IP + + P+ + PN F+P FL + + RN M
Sbjct: 363 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFM 408
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 33.5 bits (75), Expect = 0.036, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 305 VQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS-HRNPSAM 104
IP + + P+ + PN F+P FL + + RN M
Sbjct: 363 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFM 408
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 33.5 bits (75), Expect = 0.036, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 305 VQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS-HRNPSAM 104
IP + + P+ + PN F+P FL + + RN M
Sbjct: 363 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFM 408
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 31 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 90
+++E +R P P + R+ + IPA + ++ +R ++P++FDP R
Sbjct: 277 IVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR 336
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 26 DLLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPN 84
+L + ++E +R P PV A R A + + IP G + + + HR P+++ + +
Sbjct: 284 ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 343
Query: 85 QFD 87
+FD
Sbjct: 344 RFD 346
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 22 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
+ + R +E++R P ++ R +V+ G Y +P G IA H + +
Sbjct: 322 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFP 381
Query: 82 NPNQFDPDR 90
P ++DP+R
Sbjct: 382 EPRRWDPER 390
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 31 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 90
+++E +R P P + R+ + IPA + ++ +R ++P++FDP R
Sbjct: 297 IVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR 356
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 26 DLLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPN 84
+L + ++E +R P PV A R A + + IP G + + + HR P+++ + +
Sbjct: 274 ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 333
Query: 85 QFD 87
+FD
Sbjct: 334 RFD 336
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 33.1 bits (74), Expect = 0.053, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCG---- 56
V E++ V+G + +P + V+ E R P S P+ V C
Sbjct: 306 VQEEIERVVGR--NRSPCMQDRGHMPYTDAVVHEVQRYIDLIPT---SLPHAVTCDVKFR 360
Query: 57 DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
+Y IP G +I + + + + NP FDP FL
Sbjct: 361 NYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFL 396
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 23 QRLDLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
++ +L+ ++E +R+ A A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 82 NPNQFDPDRFLPSQSSH 98
NP + DR P+ +SH
Sbjct: 321 NPGSIELDR--PNPTSH 335
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 82 NPNQFDPDRFLPSQSSH 98
NP + DR P+ +SH
Sbjct: 321 NPGSIELDR--PNPTSH 335
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 82 NPNQFDPDRFLPSQSSH 98
NP + DR P+ +SH
Sbjct: 321 NPGSIELDR--PNPTSH 335
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 260 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Query: 82 NPNQFDPDRFLPSQSSH 98
NP + DR P+ +SH
Sbjct: 320 NPGSIELDR--PNPTSH 334
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 82 NPNQFDPDRFLPSQSSH 98
NP + DR P+ +SH
Sbjct: 321 NPGSIELDR--PNPTSH 335
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 82 NPNQFDPDRFLPSQSSH 98
NP + DR P+ +SH
Sbjct: 321 NPGSIELDR--PNPTSH 335
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 82 NPNQFDPDRFLPSQSSH 98
NP + DR P+ +SH
Sbjct: 321 NPGSIELDR--PNPTSH 335
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 81
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 82 NPNQFDPDRFLPSQSSH 98
NP + DR P+ +SH
Sbjct: 321 NPGSIELDR--PNPTSH 335
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A+ + I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ 339
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A+ + I R+A +V GD + A I +
Sbjct: 261 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 320
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 321 RDEEVFENPDEFNMNRKWPPQ 341
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A+ + I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ 339
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A+ + I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ 339
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A+ + I R+A +V GD + A I +
Sbjct: 260 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 320 RDEEVFENPDEFNMNRKWPPQ 340
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A+ + I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ 339
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A+ + I R+A +V GD + A I +
Sbjct: 260 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 320 RDEEVFENPDEFNMNRKWPPQ 340
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ 339
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 260 DQLAQLKANPSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 320 RDEEVFENPDEFNMNRKWPPQ 340
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ 339
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A+ + I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ 339
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 20 DQLQRLD----LLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 260 DQLAQLKANPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
R +++ NP++F+ +R P Q
Sbjct: 320 RDEEVFENPDEFNMNRKWPPQ 340
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 31.6 bits (70), Expect = 0.15, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E+ V+G +P + V+ E R P + + + + +Y
Sbjct: 305 VQEEIDHVIGRH--RSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYL 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
IP G +I + + + + NPN FDP FL
Sbjct: 363 IPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFL 395
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 31 VIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 89
V++ET+R P + V+ R A +V GD IPAG ++ I YG + + P D
Sbjct: 278 VVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDAL-IVSYGALGRDERAHGPTA---D 333
Query: 90 RF-LPSQSSHRNPS 102
RF L S +R+ S
Sbjct: 334 RFDLTRTSGNRHIS 347
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 32 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYG 72
++E +RL +AR+ +V GD TIPAG + + +YG
Sbjct: 286 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYG 325
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 32 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYG 72
++E +RL +AR+ +V GD TIPAG + + +YG
Sbjct: 287 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYG 326
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 32 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYG 72
++E +RL +AR+ +V GD TIPAG + + +YG
Sbjct: 286 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYG 325
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 28 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 87
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 88 PDR 90
R
Sbjct: 333 VTR 335
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 28 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 87
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 88 PDR 90
R
Sbjct: 333 VTR 335
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 28 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 87
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 88 PDR 90
R
Sbjct: 334 VTR 336
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 28 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 87
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 88 PDR 90
R
Sbjct: 334 VTR 336
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 28 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 87
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 88 PDR 90
R
Sbjct: 334 VTR 336
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 LDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYGLHRHPQLWN 81
+ LL ++E +R PV + + + V+ D IPAG ++ + + HR P+ +
Sbjct: 293 MTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 82 NPNQFD 87
+P++FD
Sbjct: 351 DPHRFD 356
>pdb|1IW7|C Chain C, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1IW7|M Chain M, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1SMY|C Chain C, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1SMY|M Chain M, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1ZYR|C Chain C, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|1ZYR|M Chain M, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|2A68|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A68|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A69|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A69|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A6E|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6E|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6H|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2A6H|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2CW0|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2CW0|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2BE5|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2BE5|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2O5I|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5I|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5J|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2O5J|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2PPB|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|2PPB|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|3DXJ|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3DXJ|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3EQL|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3EQL|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3AOH|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOI|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|4G7H|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7H|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7O|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7O|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7Z|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4G7Z|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4GZY|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
pdb|4GZZ|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
Length = 1119
Score = 30.0 bits (66), Expect = 0.48, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 16 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHIPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 76 HPQLWNNPNQFDPDRFLPS 94
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 LDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYGLHRHPQLWN 81
+ LL ++E +R PV + + + V+ D IPAG ++ + + HR P+ +
Sbjct: 293 MTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 82 NPNQFD 87
+P++FD
Sbjct: 351 DPHRFD 356
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 LDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYGLHRHPQLWN 81
+ LL ++E +R PV + + + V+ D IPAG ++ + + HR P+ +
Sbjct: 293 MTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 82 NPNQFD 87
+P++FD
Sbjct: 351 DPHRFD 356
>pdb|1I6V|C Chain C, Thermus Aquaticus Core Rna Polymerase-Rifampicin Complex
Length = 1118
Score = 30.0 bits (66), Expect = 0.48, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 16 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 76 HPQLWNNPNQFDPDRFLPS 94
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1HQM|C Chain C, Crystal Structure Of Thermus Aquaticus Core Rna
Polymerase- Includes Complete Structure With Side-Chains
(Except For Disordered Regions)-Further Refined From
Original Deposition-Contains Additional Sequence
Information
Length = 1119
Score = 30.0 bits (66), Expect = 0.48, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 16 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 76 HPQLWNNPNQFDPDRFLPS 94
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1YNJ|C Chain C, Taq Rna Polymerase-Sorangicin Complex
pdb|1YNN|C Chain C, Taq Rna Polymerase-rifampicin Complex
pdb|2GHO|C Chain C, Recombinant Thermus Aquaticus Rna Polymerase For
Structural Studies
Length = 1119
Score = 30.0 bits (66), Expect = 0.48, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 16 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 76 HPQLWNNPNQFDPDRFLPS 94
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1L9U|C Chain C, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9U|L Chain L, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9Z|C Chain C, Thermus Aquaticus Rna Polymerase HoloenzymeFORK-Junction
Promoter Dna Complex At 6.5 A Resolution
Length = 1118
Score = 30.0 bits (66), Expect = 0.48, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 16 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 76 HPQLWNNPNQFDPDRFLPS 94
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 30.0 bits (66), Expect = 0.49, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 1 VYHELQDVL--GDSPDSAPTYDQLQRLD---LLTRVIKETMRLFPAAPVIARSAPYEVQC 55
V EL+ +L + P S T + LD +L V+ E++RL AAP I R ++
Sbjct: 299 VRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAM 357
Query: 56 G-----DYTIPAGASIAIFIY-GLHRHPQLWNNPNQFDPDRFLPSQSSHR 99
++ + G + +F + R P+++ +P F +RFL S +
Sbjct: 358 PMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEK 407
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 29.6 bits (65), Expect = 0.58, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
++ E+ V+G P P Q + + V+ E R P + A + Y
Sbjct: 304 LHEEIDRVIG--PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYL 361
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
IP G + + + Q + +P +F P+ FL
Sbjct: 362 IPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFL 394
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 28 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 87
L ++E +R R A EV+ G IP +++ + +R P + +P++FD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFD 332
Query: 88 PDR 90
R
Sbjct: 333 VTR 335
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 31 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 90
V++E +R A + R +V +P+G + ++ +R P ++ DPD
Sbjct: 290 VVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFD-----DPDT 344
Query: 91 FLPSQSSHRN 100
FLP + +R+
Sbjct: 345 FLPGRKPNRH 354
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 27 LLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQF 86
L+ R++ E +R R+A + + I G I + +R ++++NP++F
Sbjct: 299 LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEF 358
Query: 87 DPDRF 91
D RF
Sbjct: 359 DITRF 363
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 32 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 91
+E +RL+P A ++ R + G+ +P G ++ + Y R + F P+RF
Sbjct: 258 FQEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERF 315
Query: 92 LPSQSS 97
L + +
Sbjct: 316 LAERGT 321
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 20 DQL----QRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
DQL +R DLL + ++E +R P+ R +V+ + + + +R
Sbjct: 254 DQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANR 313
Query: 76 HPQLWNNPNQFDPDRF-LPSQS 96
P+ ++ P+ FD +R +PS S
Sbjct: 314 DPRRYDRPDDFDIERDPVPSMS 335
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 32 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR-HPQLWNNPNQFDPDR 90
+E +RL+P A ++ R + G+ +P G ++ + Y R H + + F P+R
Sbjct: 258 FQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH---FPDGEAFRPER 314
Query: 91 FLPSQSS 97
FL + +
Sbjct: 315 FLEERGT 321
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 1 VYHELQDVL--GDSPDSAPTYDQLQRLD---LLTRVIKETMRLFPAAPVIARSAPYEVQC 55
V EL+ +L + P S T + LD +L V+ E++RL AAP I R ++
Sbjct: 287 VRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAM 345
Query: 56 -----GDYTIPAGASIAIFIY-GLHRHPQLWNNPNQFDPDRFLPSQSSHRN 100
++ + G + +F + R P+++ +P F +RFL S +
Sbjct: 346 PMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKK 396
>pdb|3DNP|A Chain A, Crystal Structure Of Stress Response Protein Yhax From
Bacillus Subtilis
Length = 290
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 5 LQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI 45
L D+L D P SAP + D+ + + + FPA VI
Sbjct: 147 LSDLLXDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVI 187
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 26.2 bits (56), Expect = 6.9, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 26 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 85
+LL +++E +R R+A + + I AG + + + P + P +
Sbjct: 320 NLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 86 FDPDR 90
FDP R
Sbjct: 380 FDPTR 384
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,223,469
Number of Sequences: 62578
Number of extensions: 155017
Number of successful extensions: 514
Number of sequences better than 100.0: 169
Number of HSP's better than 100.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 306
Number of HSP's gapped (non-prelim): 172
length of query: 141
length of database: 14,973,337
effective HSP length: 89
effective length of query: 52
effective length of database: 9,403,895
effective search space: 489002540
effective search space used: 489002540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)