RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16716
(141 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 139 bits (353), Expect = 2e-40
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E+ +V+G ++ L RL L++V+KE++RL+P A R E +
Sbjct: 280 LQAEVDEVIGS--KRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRV 337
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHR 99
P + Y + R + +P F+PDRF P R
Sbjct: 338 PGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPR 376
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 135 bits (342), Expect = 7e-39
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E++ V G P ++ +++L VI E MRL PA V+ R A E + G Y I
Sbjct: 300 IRDEVEAVTGGRP---VAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRI 356
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
PAGA I Y + R P+ +++ +FDPDR+LP ++++ A
Sbjct: 357 PAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYA 399
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 133 bits (336), Expect = 5e-38
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
Y E + V G++ TYDQL+ L+LL R IKET+RL P ++ R A YTI
Sbjct: 289 CYLEQKTVCGENLP-PLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTI 347
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
P G + + R W F+PDR+L + A
Sbjct: 348 PPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFA 390
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 125 bits (316), Expect = 3e-35
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGD--GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSH-RNPSA 103
G +A +R P+ + +P+ F P R+ + N
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWT 383
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 125 bits (316), Expect = 4e-35
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQ-CGDYT 59
E VL D P+Y Q+++L + V+ E +RL+P AP + A + G+Y
Sbjct: 290 AAEEAARVLVDPV---PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP 346
Query: 60 IPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRN 100
+ G + + I LHR +W ++ +F P+RF + ++
Sbjct: 347 LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH 388
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 124 bits (313), Expect = 1e-34
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E+Q V+G+ D +Q+L ++ I E+MR P ++ R A + Y +
Sbjct: 332 IIKEIQTVIGERD---IKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPV 388
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSH 98
G +I + I +HR + + PN+F + F +
Sbjct: 389 KKGTNIILNIGRMHR-LEFFPKPNEFTLENFAKNVPYR 425
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 121 bits (306), Expect = 7e-34
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E+++ + + + R +E++R P ++ R +V+ G Y +
Sbjct: 292 LRKEIEEFPAQLN----YNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVV 347
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS 97
P G IA H + + P ++DP+R + +
Sbjct: 348 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA 384
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 118 bits (296), Expect = 2e-32
Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA--PYEVQCGD- 57
+ E++ V+ + T +++++L V+ E +R P A ++ D
Sbjct: 321 LAEEIRSVIKSN-GGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDA 379
Query: 58 -YTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNP 101
+ + AG + + R P++++ ++F P+RF+ +
Sbjct: 380 AFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLR 424
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 113 bits (284), Expect = 9e-31
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
V E + T + L+++ L +V++E +RL P R + Q +
Sbjct: 280 VRQEQNKLQLSQE---LTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHF 336
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNP 101
P G ++ I H P L+ +P +FDP+RF P S+ NP
Sbjct: 337 PKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNP 377
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 113 bits (284), Expect = 1e-30
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E+Q VL D + P + L+ + L +KE+MRL P+ P R+ G+Y +
Sbjct: 320 LLQEVQSVLPD--NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYAL 377
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN 100
P G + + L + + ++F P+R+L +
Sbjct: 378 PKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINP 417
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 113 bits (283), Expect = 1e-30
Identities = 18/97 (18%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA--PYEVQCGD- 57
+ E++ + D T + ++++ L V+ E++R+ P P A + ++ D
Sbjct: 303 LAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDA 362
Query: 58 -YTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLP 93
+ + G + + + P++++ P ++ PDRF+
Sbjct: 363 TFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVG 399
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 111 bits (279), Expect = 8e-30
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E+ LQ + LL IKET+RL P + + R ++ DY I
Sbjct: 312 LRAEVLAARHQ--AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMI 369
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN 100
PA + + IY L R P + +P FDP R+L +
Sbjct: 370 PAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY 409
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 105 bits (264), Expect = 1e-27
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 1 VYHELQDVLGDS--------PDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI---ARSA 49
E++ L ++ + +L L +L +IKE++RL A+ I
Sbjct: 294 ATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDF 353
Query: 50 PYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN 100
++ G Y I IA++ +H P+++ +P F DR+L +
Sbjct: 354 TLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKT 404
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 104 bits (263), Expect = 2e-27
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
+ E+ VL + + PTYD + +++ L V+ ET+RLFP A + R +V+ I
Sbjct: 309 LQEEIDAVLPN--KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFI 366
Query: 61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
P G + I Y LHR P+ W P +F P+RF + +P
Sbjct: 367 PKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYI 409
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 99.8 bits (249), Expect = 7e-26
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 20 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 79
+Q+ D ++E R +P P + A + + P G + + +YG +
Sbjct: 266 ALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 80 WNNPNQFDPDRFLPSQSS 97
W +P +F P+RF
Sbjct: 326 WADPQEFRPERFRAWDED 343
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 98.1 bits (245), Expect = 2e-25
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 25 LDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPN 84
+ +E +RL+P A ++ R + G+ +P G ++ + Y R + +
Sbjct: 251 EEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDGE 308
Query: 85 QFDPDRFLPSQSSHRN 100
F P+RFL + +
Sbjct: 309 AFRPERFLEERGTPSG 324
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 98.3 bits (245), Expect = 3e-25
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 12/112 (10%)
Query: 1 VYHELQDVLGD-----SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA--PYEV 53
V EL+ +L S + L +L V+ E++RL AP I R +
Sbjct: 299 VRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAM 357
Query: 54 QCGD---YTIPAGASIAIF-IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNP 101
D + + G + +F R P+++ +P F +RFL S +
Sbjct: 358 PMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKD 409
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 95.5 bits (238), Expect = 2e-24
Identities = 16/77 (20%), Positives = 35/77 (45%)
Query: 21 QLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLW 80
+ ++E R +P P + + + G S+ + +YG + P+LW
Sbjct: 269 RSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLW 328
Query: 81 NNPNQFDPDRFLPSQSS 97
++P++F P+RF + +
Sbjct: 329 DHPDEFRPERFAEREEN 345
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 86.6 bits (215), Expect = 5e-21
Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYEVQC---G 56
V E+ ++ + + V+ ET+RL AA + + ++
Sbjct: 290 VREEI-----QGGKHLRLEERQKNTPVFDSVLWETLRLTAAALITRDVTQDKKICLSNGQ 344
Query: 57 DYTIPAGASIAIF-IYGLHRHPQLWNNPNQFDPDRFLPS 94
+Y + G + +F PQ+ P F DRFL +
Sbjct: 345 EYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNA 383
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 71.8 bits (177), Expect = 8e-16
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
+Y E+ +G PT RL LL I+E +RL P AP+ I A + G++
Sbjct: 310 LYEEIDQNVG--FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFA 367
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
+ G + I ++ LH + + W+ P+QF P+RFL
Sbjct: 368 VDKGTEVIINLWALHHNEKEWHQPDQFMPERFL 400
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 71.1 bits (175), Expect = 1e-15
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 1 VYHELQDVLG-DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 58
+ EL LG + S TY RL LL I E +RL P P+ + Y
Sbjct: 316 LQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGY 375
Query: 59 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
IP G + + G H +W P++F PDRFL
Sbjct: 376 DIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFL 409
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 68.7 bits (169), Expect = 1e-14
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
+ EL V+G + P +L L I ET R P I S + +
Sbjct: 319 IQKELDTVIG--RERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFY 376
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
IP + + + ++ P+LW +P++F P+RFL
Sbjct: 377 IPKKCCVFVNQWQVNHDPELWEDPSEFRPERFL 409
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 67.6 bits (166), Expect = 2e-14
Identities = 28/108 (25%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V EL V+G D P L + + E MR PV I + Y
Sbjct: 316 VQAELDQVVG--RDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYH 373
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVI 107
IP + + + ++ P W NP FDP RFL V+
Sbjct: 374 IPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVM 421
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 67.6 bits (166), Expect = 3e-14
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E+ ++G P+ P++D ++ V+ E +R P+ I + + Y+
Sbjct: 310 VQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 367
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
IP G ++ +Y +H + W +P F P+RFL S A
Sbjct: 368 IPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEA 411
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 66.0 bits (162), Expect = 7e-14
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E+ DV+G P + T VI E R P+ + +++ +
Sbjct: 309 VQQEIDDVIG--QVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFR 366
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
IP G ++ + + + +W P +F P+ FL +Q P A
Sbjct: 367 IPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEA 410
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 63.7 bits (156), Expect = 5e-13
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E++ V+G + +P + V+ E R P + + +++ +Y
Sbjct: 306 VQEEIERVIG--RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYL 363
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
IP G +I I + + + + NP FDP FL + +
Sbjct: 364 IPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY 407
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 63.4 bits (155), Expect = 6e-13
Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 305 VQKEIEQVIG--SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
IP + + P+ + PN F+P FL + + +
Sbjct: 363 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG 406
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 63.3 bits (155), Expect = 7e-13
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
++ E+ V+G P P Q + + V+ E R P + A + Y
Sbjct: 304 LHEEIDRVIG--PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYL 361
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL 92
IP G + + + Q + +P +F P+ FL
Sbjct: 362 IPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFL 394
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 62.6 bits (153), Expect = 1e-12
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
V+ E+ V+G + P ++ ++ + VI E R P+ +AR + + D+
Sbjct: 305 VHEEIDRVIG--KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFF 362
Query: 60 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
+P G + + + R P ++NP F+P FL + + A
Sbjct: 363 LPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 51.1 bits (123), Expect = 1e-08
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
Q L + VI+ETMR P +++R A ++ G +T+P G ++ + + HR
Sbjct: 277 GQWAALAADGSRASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHR 336
Query: 76 HPQLWNNPNQFDPDR 90
P + P++FDPDR
Sbjct: 337 DPTIVGAPDRFDPDR 351
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 51.2 bits (123), Expect = 1e-08
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+Q+ + L+ R I ET+R P +I R + G I + I +R
Sbjct: 290 EQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANR 349
Query: 76 HPQLWNNPNQFDPDR 90
P+ + P+ F+ R
Sbjct: 350 DPEAFEQPDVFNIHR 364
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 50.7 bits (122), Expect = 2e-08
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
D+ RL L +E +R R+ +V+ TI G + +F+ +R
Sbjct: 272 DEFARLRADPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANR 331
Query: 76 HPQLWNNPNQFDPDR 90
P+ W++P+++D R
Sbjct: 332 DPRRWDDPDRYDITR 346
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 50.3 bits (121), Expect = 2e-08
Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+ +++E +R P P + R+ + IPA + ++ +R
Sbjct: 262 AHWDAAAEDPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANR 321
Query: 76 HPQLWNNPNQFDPDRFLPSQSSH 98
++P++FDP R ++
Sbjct: 322 DSDAHDDPDRFDPSRK-SGGAAQ 343
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 50.3 bits (121), Expect = 2e-08
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+QL +L DL+ ++E +R + AR A ++ TI G + + + +R
Sbjct: 255 EQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANR 314
Query: 76 HPQLWNNPNQFDPDR 90
P ++ NP+ FD R
Sbjct: 315 DPSIFTNPDVFDITR 329
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 50.0 bits (120), Expect = 3e-08
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
D L L + ++E MR P + R A +++ GD+ IP G+ + + +R
Sbjct: 275 DVLDELRTTPESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANR 334
Query: 76 HPQLWNNPNQFDPDR 90
P + +P+ D R
Sbjct: 335 DPARFPDPDVLDVHR 349
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 49.5 bits (119), Expect = 4e-08
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+ +I E +R+ P R +V+ G I AG+ I I +R
Sbjct: 254 EVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANR 313
Query: 76 HPQLWNNPNQFDPDR 90
P+++++P+ FD R
Sbjct: 314 DPEVFDDPDVFDHTR 328
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 49.5 bits (119), Expect = 5e-08
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
DQL L DLL + ++E +R P+ R +V+ + + + +R
Sbjct: 254 DQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANR 313
Query: 76 HPQLWNNPNQFDPDR 90
P+ ++ P+ FD +R
Sbjct: 314 DPRRYDRPDDFDIER 328
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 49.1 bits (118), Expect = 6e-08
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
DQL + L ++E +R R A EV+ G IP +++ + +R
Sbjct: 262 DQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 321
Query: 76 HPQLWNNPNQFDPDR 90
P+ + +P++FD R
Sbjct: 322 DPKQFPDPHRFDVTR 336
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 48.9 bits (117), Expect = 7e-08
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+R+ R + E +RL PA + R+A EV+ G++ I G + + + +R
Sbjct: 243 GLAERIADDPAAAQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANR 302
Query: 76 HPQLWNNPNQFDPDR 90
P+++ P++ D DR
Sbjct: 303 DPEVFAEPDRLDVDR 317
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 47.2 bits (113), Expect = 3e-07
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+Q+ L ++ V++E +R + I R A +++ G TI AG ++ + I ++R
Sbjct: 264 EQIDVLLRDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNR 323
Query: 76 HPQLWNNPNQFDPDR 90
+ + NP+ FD R
Sbjct: 324 DAKAYENPDIFDARR 338
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 46.9 bits (112), Expect = 3e-07
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
DQ + L + + ++E +RL +AR+ +V GD TIPAG + + +R
Sbjct: 271 DQRRLLLDDPEGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANR 330
Query: 76 HPQLWN-NPNQFDPDR 90
+ + + + D R
Sbjct: 331 DERQYGPDAAELDVTR 346
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 46.1 bits (110), Expect = 6e-07
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL L LL ++E +R P R V IPAG ++ + + H
Sbjct: 284 DQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAH 343
Query: 75 RHPQLWNNPNQFDPDR 90
R P+ + +P++FD R
Sbjct: 344 RTPERFPDPHRFDIRR 359
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 45.6 bits (109), Expect = 9e-07
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 19 YDQLQRL---DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
++ QR+ +L + I+E +R P R V+ GD TI G + ++I +R
Sbjct: 228 FNLWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANR 287
Query: 76 HPQLWNNPNQFDPDR 90
+++++ +F PDR
Sbjct: 288 DEEVFHDGEKFIPDR 302
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 45.7 bits (109), Expect = 9e-07
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
+ L+ + L+ + E +R + R A +++ +I G + + I
Sbjct: 275 EALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSAL 334
Query: 75 RHPQLWNNPNQFDPDR 90
R +++ P+ FD R
Sbjct: 335 RDGTVFSRPDVFDVRR 350
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 45.3 bits (108), Expect = 1e-06
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 19 YDQLQRL--DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 76
Y+ + + ++E +R P R +V+ D I G + ++I +R
Sbjct: 229 YNSWDYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRD 288
Query: 77 PQLWNNPNQFDPDR 90
+++ +P+ F PDR
Sbjct: 289 EEVFKDPDSFIPDR 302
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 44.9 bits (107), Expect = 2e-06
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
DQ L LL I+E +R + R + + + AG + + +
Sbjct: 251 DQWDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANF 310
Query: 76 HPQLWNNPNQFDPDR 90
++ P +FD R
Sbjct: 311 DEAVFCEPEKFDVQR 325
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 44.9 bits (107), Expect = 2e-06
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQ + L L++ ++E +R P + R +V TIPAG + + + +
Sbjct: 257 DQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAAN 316
Query: 75 RHPQLWNNPNQFDPDR 90
R P++ D R
Sbjct: 317 RDADWMPEPDRLDITR 332
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 44.5 bits (106), Expect = 2e-06
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 20 DQLQRL----DLLTRVIKETMR-LFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
L +L+ ++E +R A + R A ++Q GD + G + + + G +
Sbjct: 254 QLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGAN 313
Query: 75 RHPQLWNNPNQFDPDRFLPSQ 95
P+ + NP + DR P+
Sbjct: 314 FDPEHFPNPGSIELDRPNPTS 334
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 44.5 bits (106), Expect = 2e-06
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+ +RL +L+ + E +R + A + R EV GD T+ G + ++ R
Sbjct: 253 ELRRRLIAHPELIPNAVDELLRFYGPAM-VGRLVTQEVTVGDITMKPGQTAMLWFPIASR 311
Query: 76 HPQLWNNPNQFDPDR 90
+++P+ +R
Sbjct: 312 DRSAFDSPDNIVIER 326
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 44.2 bits (105), Expect = 3e-06
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
+Q+ R + E +R R A ++ I G S+ + +
Sbjct: 257 EQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAAN 316
Query: 75 RHPQLWNNPNQFDPDR 90
R P L + ++ D R
Sbjct: 317 RDPALAPDVDRLDVTR 332
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 43.8 bits (104), Expect = 4e-06
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
L L + V++E +R A + R +V +P+G + ++ +R
Sbjct: 275 GLLTALRDGSADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANR 334
Query: 76 HPQLWNNPNQFDPDR 90
P +++P+ F P R
Sbjct: 335 DPAEFDDPDTFLPGR 349
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 43.8 bits (104), Expect = 4e-06
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAA--PVIARSAPYEVQCGDYTIPAGASIAIFIYGL 73
DQ D++ R ++E +R A + R A +++ G TI AG + +
Sbjct: 262 DQRAAALADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLP 321
Query: 74 HRHPQLWNNPNQFDPDR 90
+ + + P +FD R
Sbjct: 322 NFDERAFTGPEEFDAAR 338
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 43.8 bits (104), Expect = 4e-06
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
Q++ L + RV+ E +R P R A +V I AG + I +
Sbjct: 266 GQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMAN 325
Query: 75 RHPQLWNNPNQFDPDR 90
R L +P+ D +R
Sbjct: 326 RDEALTPDPDVLDANR 341
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 43.8 bits (104), Expect = 4e-06
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQ ++ +L + ++E +R P PV R A + + IP G + + + H
Sbjct: 274 DQWMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAH 333
Query: 75 RHPQLWNNPNQFDPDR 90
R P+++ + ++FD
Sbjct: 334 RDPRVFADADRFDITV 349
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 43.8 bits (104), Expect = 5e-06
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
+QL + ++E +R F A V +R A +V+ G +I AG + + + +
Sbjct: 266 EQLTVVKANPGRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSAN 325
Query: 75 RHPQLWNNPNQFDPDR 90
P ++ +P D +R
Sbjct: 326 WDPAVFKDPAVLDVER 341
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 43.8 bits (104), Expect = 5e-06
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
+ L DL+ + E +R+ A + R A +++ T+PA + + G +
Sbjct: 270 ELPAELRKDPDLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGAN 329
Query: 75 RHPQLWNNPNQFDPDR 90
P+ +++P + D R
Sbjct: 330 HDPEQFDDPERVDFHR 345
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 43.1 bits (102), Expect = 7e-06
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+ + + L R ++E R F AR +++ + G I +
Sbjct: 277 ETVAEMRREPLKLQRGVEELFRRFAVVS-DARYVVSDMEFHGTMLKEGDLILLPTALHGL 335
Query: 76 HPQLWNNPNQFDPDR 90
+ ++P D R
Sbjct: 336 DDRHHDDPMTVDLSR 350
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 43.1 bits (102), Expect = 8e-06
Identities = 12/76 (15%), Positives = 22/76 (28%), Gaps = 7/76 (9%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
+ Q L + + +E +R F V R + + + G I +
Sbjct: 270 EHRQELIERPERIPAACEELLRRFS--LVADGRILTSDYEFHGVQLKKGDQILLPQMLSG 327
Query: 75 RHPQLWNNPNQFDPDR 90
+ P D R
Sbjct: 328 LDERENACPMHVDFSR 343
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 42.6 bits (101), Expect = 1e-05
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSA--PYEVQCGDYTIPAGASIAIFIYG 72
DQL + V++ET+R + R A + G TI G I
Sbjct: 263 DQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDG-RTIARGEPILASYAA 321
Query: 73 LHRHPQLWNNPNQFDPDR 90
+RHP + + FD R
Sbjct: 322 ANRHPDWHEDADTFDATR 339
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 42.6 bits (101), Expect = 1e-05
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL +L L + ++E R +A I R+A +V GD + A I +
Sbjct: 261 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 320
Query: 75 RHPQLWNNPNQFDPDR 90
R +++ NP++F+ +R
Sbjct: 321 RDEEVFENPDEFNMNR 336
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 42.6 bits (101), Expect = 1e-05
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+ + L DL+ E MR +P ++R+A +V TI G + + +
Sbjct: 255 EDQRLLRERPDLIPAAADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNL 313
Query: 76 HPQLWNNPNQFDPDR 90
P + P + DR
Sbjct: 314 DPASFEAPEEVRFDR 328
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 42.2 bits (100), Expect = 1e-05
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAP--VIARSAPYEVQCGDYTIPAGASIAIFIYGL 73
+ ++L +L+ ++E R P R A +V TI AG +
Sbjct: 275 ELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAA 334
Query: 74 HRHPQLWNNPNQFDPDR 90
+R + + ++ D DR
Sbjct: 335 NRDQAQFPDADRIDVDR 351
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 42.2 bits (100), Expect = 1e-05
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPV--IARSAPYEVQCGDYTIPAGASIAIFIYGL 73
+ +RL ++ R I E +R P ++R A +V+ I AG ++ +
Sbjct: 262 ELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAA 321
Query: 74 HRHPQLWNNPNQFDPDR 90
+R P+++ +P++ D +R
Sbjct: 322 NRDPEVFPDPDRIDFER 338
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 42.2 bits (100), Expect = 1e-05
Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQL L L+ ++E +R R A +V+ G I G + +
Sbjct: 258 DQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAAD 317
Query: 75 RHPQLWNNPNQFDPDR 90
P P +FD R
Sbjct: 318 FDPAFVEEPERFDITR 333
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 42.2 bits (100), Expect = 1e-05
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
+Q L L+ ++E +R A + R A +++ I AG + + +
Sbjct: 265 EQYAALRADRSLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIAN 324
Query: 75 RHPQLWNNPNQFDPDR 90
R ++ +P+ D R
Sbjct: 325 RDGTVYEDPDALDIHR 340
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 42.2 bits (100), Expect = 2e-05
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
+Q + + V++ET+R P + V+ R A +V GD IPAG ++ + L
Sbjct: 263 EQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALG 322
Query: 75 RHPQLWN-NPNQFDPDRFLPSQSSH 98
R + ++FD R S + H
Sbjct: 323 RDERAHGPTADRFDLTR--TSGNRH 345
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 41.9 bits (99), Expect = 2e-05
Identities = 14/75 (18%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+ + L L R +E R FP AR + + + G I +
Sbjct: 276 ELVAELRSDPLKLMRGAEEMFRRFPVV-SEARMVAKDQEYKGVFLKRGDMILLPTALHGL 334
Query: 76 HPQLWNNPNQFDPDR 90
P + D R
Sbjct: 335 DDAANPEPWKLDFSR 349
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 41.9 bits (99), Expect = 2e-05
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIA--RSAPYEVQCGDYTIPAGASIAIFIYGL 73
+ + R+ + E +R + R A +V+ I AG + +
Sbjct: 265 ELMARMRERPGARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAA 324
Query: 74 HRHPQLWNNPNQFDPDR 90
+R P ++ +P++ D DR
Sbjct: 325 NRDPDVFPDPDRIDLDR 341
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 41.5 bits (98), Expect = 2e-05
Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 20 DQLQRL-----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
+Q R L ++E +R + R+ +++ + AG ++++ +
Sbjct: 295 EQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSAN 354
Query: 75 RHPQLWNNPNQFDPDR 90
R + +P FD R
Sbjct: 355 RDESKFADPWTFDLAR 370
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 41.1 bits (97), Expect = 4e-05
Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 20 DQLQRL--DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 77
DQ + E +R R+A + + I G + +F +
Sbjct: 289 DQWELYKKVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDE 348
Query: 78 QLWNNPNQFDPDR 90
+++ +P F+ R
Sbjct: 349 EVFQDPFTFNILR 361
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 41.0 bits (97), Expect = 4e-05
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 20 DQLQRL-DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 77
D + + ++ET+R + P + R A + + I G + +++ +R
Sbjct: 209 DIIDDALKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDE 268
Query: 78 QLWNNPNQFDPDR 90
++ P+ F R
Sbjct: 269 TFFDEPDLFKIGR 281
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 40.4 bits (95), Expect = 7e-05
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
D R+ +LL +++E +R R+A + + I AG + + +
Sbjct: 310 DLFARVKADRNLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANH 369
Query: 76 HPQLWNNPNQFDPDR 90
P + P +FDP R
Sbjct: 370 DPAQFPEPRKFDPTR 384
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 39.9 bits (94), Expect = 8e-05
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
DQ +L L+ ++ E +R + R+A + + G TI G + ++ Y +R
Sbjct: 286 DQFAKLKANPALVETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNR 345
Query: 76 HPQLWNNPNQFDPDRFLP 93
++ + P +F DR P
Sbjct: 346 DDEVIDRPEEFIIDRPRP 363
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 39.6 bits (93), Expect = 1e-04
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 20 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 75
+QL L+ R++ E +R R+A + + I G I + +R
Sbjct: 288 EQLALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANR 347
Query: 76 HPQLWNNPNQFDPDR 90
++++NP++FD R
Sbjct: 348 DEEVFSNPDEFDITR 362
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 39.1 bits (92), Expect = 2e-04
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 20 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 74
DQ+ L +L+ +E +R R A +V+ I AG + + +
Sbjct: 247 DQMALLREKPELIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATN 306
Query: 75 RHPQLWNNPNQFDPDR 90
R P ++FD R
Sbjct: 307 RAP-----GDRFDITR 317
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.0 bits (74), Expect = 0.015
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 9/34 (26%)
Query: 21 QLQRLDLLTRVIKETMRLF-P-AAPVIARSAPYE 52
L++L +++L+ +AP +A A E
Sbjct: 21 ALKKLQ-------ASLKLYADDSAPALAIKATME 47
Score = 30.3 bits (67), Expect = 0.12
Identities = 13/40 (32%), Positives = 14/40 (35%), Gaps = 18/40 (45%)
Query: 4 ELQDV--LGDS-----PDSAPTYDQLQRLDLLTRVIKETM 36
E Q + L S DSAP L IK TM
Sbjct: 18 EKQALKKLQASLKLYADDSAPA---------LA--IKATM 46
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.1 bits (72), Expect = 0.057
Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 33/141 (23%)
Query: 5 LQDVLGD-SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARS-------------AP 50
LQ +L P+ D + L I+ +R +
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 51 YEVQCGDYTIPAGASIAIFIYGLHR-HPQLWNNPNQFDPDR----F----------LPSQ 95
+ + C + F+ H L ++ PD LP +
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 96 SSHRNPSAMSVIVTLDALRLR 116
NP +S+I A +R
Sbjct: 322 VLTTNPRRLSII----AESIR 338
Score = 31.0 bits (69), Expect = 0.14
Identities = 18/123 (14%), Positives = 45/123 (36%), Gaps = 25/123 (20%)
Query: 14 DSAPTYDQLQRLDL--LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI-PAGASIAIFI 70
D T+D + ++ LT +I+ ++ + P R ++ ++ P A I +
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLE--PAEYRKM-FD----RLSVFPPSAHIPTIL 391
Query: 71 YGLHRHPQLWNNPNQFDPDRFLPSQSSH------RNPSAMSVIVTLDALRLRTICNMRAS 124
L +W + + D + H + P + +++ ++ L +
Sbjct: 392 LSL-----IWFDVIKSDVMVVV--NKLHKYSLVEKQPKEST--ISIPSIYLELKVKLENE 442
Query: 125 IAI 127
A+
Sbjct: 443 YAL 445
Score = 30.2 bits (67), Expect = 0.22
Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 27/126 (21%)
Query: 7 DVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA---PYEVQCGDYTIPAG 63
D L + + + D LT E L + P EV T P
Sbjct: 279 DFLSAATTTHISLDHHS--MTLTP--DEVKSLL--LKYLDCRPQDLPREV-LT--TNPR- 328
Query: 64 ASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVI-VTLDALRLRTICNMR 122
++I + W+N + D+ ++I +L+ L M
Sbjct: 329 -RLSIIAESIRDGLATWDNWKHVNCDKL------------TTIIESSLNVLEPAEYRKMF 375
Query: 123 ASIAIF 128
+++F
Sbjct: 376 DRLSVF 381
Score = 27.9 bits (61), Expect = 1.2
Identities = 22/153 (14%), Positives = 46/153 (30%), Gaps = 45/153 (29%)
Query: 4 ELQDVLGDSPDSAPTYDQLQRL-DLLTRVIKETMRLF------PAAPVIARSAPYEVQCG 56
E+ ++ S D+ RL L +E ++ F + +P + +
Sbjct: 50 EIDHIIM-SKDAV---SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM--SPIKTEQR 103
Query: 57 DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN---------PSA---- 103
P+ + ++I R L+N+ F + + P+
Sbjct: 104 Q---PSMMTR-MYIEQRDR---LYNDNQVFAK-YNVSRLQPYLKLRQALLELRPAKNVLI 155
Query: 104 --M-----SVIVTLDALR-LRTICNMRASIAIF 128
+ + + LD + C M IF
Sbjct: 156 DGVLGSGKTWVA-LDVCLSYKVQCKM--DFKIF 185
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex,
oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus
horikoshii}
Length = 382
Score = 28.7 bits (65), Expect = 0.54
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 8 VLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPA 41
+ G + PTYD + L V ++ PA
Sbjct: 261 IGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPA 294
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme,
electron transfer, folate-ME enzyme, oxidoreductase;
HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia}
PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B*
3ada_B*
Length = 405
Score = 28.0 bits (63), Expect = 1.0
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 8 VLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPA 41
V+G DS Y Q ++ + + LFP
Sbjct: 282 VMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPI 315
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 27.7 bits (61), Expect = 1.4
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 6/31 (19%)
Query: 112 ALRLRTICNMRASI-AIFSGQ-NTAKRSTYL 140
AL R + A + AIF GQ NT Y
Sbjct: 144 AL-FRAVGEGNAQLVAIFGGQGNT---DDYF 170
>1vq0_A 33 kDa chaperonin; TM1394, joint center for structural genomics,
protein structure initiative, PSI, chaperone; HET: UNL;
2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1
Length = 302
Score = 26.1 bits (58), Expect = 4.5
Identities = 7/41 (17%), Positives = 19/41 (46%)
Query: 4 ELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV 44
++ + + P + + + + LD+L R+ E + A +
Sbjct: 199 MIEKNIKNLPSISKLFQEAEPLDVLERIFGEKVGFVETAEI 239
>2xhi_A N-glycosylase/DNA lyase; lyase-DNA complex, lyase/DNA complex,
separation-OF-function helix-hairpin-helix, DNA repair;
HET: 8OG; 1.55A {Homo sapiens} PDB: 1ko9_A 1lwy_A*
1hu0_A* 1lwv_A* 1lww_A* 2noe_A* 2noh_A* 2nol_A* 1n3c_A*
1fn7_A* 2noz_A* 1yqk_A 1yqr_A* 1yql_A* 1yqm_A* 2noi_A
1ebm_A* 1m3q_A* 1m3h_A* 1n39_A* ...
Length = 360
Score = 25.5 bits (55), Expect = 6.8
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 13/65 (20%)
Query: 72 GLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAM-----SVIVTLDALRLRTICNMRASIA 126
G H H +PN LP + HR ++ S+ LRL +
Sbjct: 2 GSHHHHHHSQDPNSMPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLV-------- 53
Query: 127 IFSGQ 131
+ SGQ
Sbjct: 54 LPSGQ 58
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll,
selenomethionine; 1.90A {Xanthomonas citri} SCOP:
b.18.1.13 c.69.1.21
Length = 615
Score = 25.5 bits (55), Expect = 8.3
Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 57 DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHR 99
++T G + + + P NP + P+ F ++
Sbjct: 553 NHTFQPGHRVMVQVQS-SLFPLYDRNPQTYVPNIFFAKPGDYQ 594
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer,
family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo
sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A*
2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Length = 507
Score = 25.5 bits (56), Expect = 9.2
Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 5/44 (11%)
Query: 2 YHELQDVLGDSPDSAPTYDQL-----QRLDLLTRVIKETMRLFP 40
+L + ++ + LT KE +FP
Sbjct: 253 QKDLLTPCYSRQNKLDSFGPINPTLNTTYSFLTTFFKEISEVFP 296
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase
(decarboxylating)); hypothetical protein, structural
genomics, PSI; 2.50A {Streptococcus pyogenes}
Length = 398
Score = 25.2 bits (56), Expect = 9.3
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 25 LDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIP 61
LD + I M++ AA IA P + IP
Sbjct: 333 LDARAKTITVEMQI-AAAKGIASLVPDDALSTTNIIP 368
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.135 0.406
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,198,740
Number of extensions: 120037
Number of successful extensions: 341
Number of sequences better than 10.0: 1
Number of HSP's gapped: 324
Number of HSP's successfully gapped: 95
Length of query: 141
Length of database: 6,701,793
Length adjustment: 84
Effective length of query: 57
Effective length of database: 4,356,429
Effective search space: 248316453
Effective search space used: 248316453
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (23.7 bits)