BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16719
(197 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 27 RVYHELQDVLGDSPDSAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY 85
++ E+ VL P+ AP TYD + +++ L V+ ET+RLFP A + R +V+
Sbjct: 308 KLQEEIDAVL---PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGM 364
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G + I Y LHR P+ W P +F P+RF + +P Y PF GPR CIG +
Sbjct: 365 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMR 424
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQ 174
+A++ MK + +L+ + P CK Q
Sbjct: 425 FALMNMKLALIRVLQNFSFKP---CKETQ 450
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 27 RVYHELQDVLGDSPDSAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY 85
++ E+ VL P+ AP TYD + +++ L V+ ET+RLFP A + R +V+
Sbjct: 309 KLQEEIDAVL---PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGM 365
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G + I Y LHR P+ W P +F P+RF + +P Y PF GPR CIG +
Sbjct: 366 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMR 425
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQ 174
+A++ MK + +L+ + P CK Q
Sbjct: 426 FALMNMKLALIRVLQNFSFKP---CKETQ 451
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 27 RVYHELQDVLGDSPDSAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY 85
++ E+ VL P+ AP TYD + +++ L V+ ET+RLFP A + R +V+
Sbjct: 310 KLQEEIDAVL---PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGM 366
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G + I Y LHR P+ W P +F P+RF + +P Y PF GPR CIG +
Sbjct: 367 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMR 426
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQ 174
+A++ MK + +L+ + P CK Q
Sbjct: 427 FALMNMKLALIRVLQNFSFKP---CKETQ 452
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYT 86
+ Y E + V G++ TYDQL+ L+LL R IKET+RL P ++ R A YT
Sbjct: 288 KCYLEQKTVCGENLPPL-TYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYT 346
Query: 87 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
IP G + + R W F+PDR+L + YVPF G CIG +
Sbjct: 347 IPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENF 406
Query: 147 AMLQMKTTISTILRRYK 163
A +Q+KT ST+LR Y+
Sbjct: 407 AYVQIKTIWSTMLRLYE 423
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDY 85
++Y E+ +G S PT RL LL I+E +RL P AP +I A + G++
Sbjct: 309 KLYEEIDQNVGFS--RTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEF 366
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL-PSQSSHRNPS-GYVPFSLGPRGCIG 143
+ G + I ++ LH + + W+ P+QF P+RFL P+ + +PS Y+PF GPR CIG
Sbjct: 367 AVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIG 426
Query: 144 SKYAMLQMKTTISTILRRYKI-LPGD 168
A ++ ++ +L+R+ + +P D
Sbjct: 427 EILARQELFLIMAWLLQRFDLEVPDD 452
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 23 ESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQC 82
E + R+ E++ V G P + ++ +++L VI E MRL PA V+ R A E +
Sbjct: 295 EHADRIRDEVEAVTGGRPVA---FEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESEL 351
Query: 83 GDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCI 142
G Y IPAGA I Y + R P+ +++ +FDPDR+LP ++++ PFS G R C
Sbjct: 352 GGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCP 411
Query: 143 GSKYAMLQMKTTISTILRRYK 163
++M Q+ + + +Y+
Sbjct: 412 SDHFSMAQLTLITAALATKYR 432
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYT 86
R+ E+Q VL D + P + L+ + L +KE+MRL P+ P R+ G+Y
Sbjct: 319 RLLQEVQSVLPD--NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYA 376
Query: 87 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
+P G + + L + + ++F P+R+L + NP ++PF +G R CIG +
Sbjct: 377 LPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWL-QKEKKINPFAHLPFGIGKRMCIGRRL 435
Query: 147 AMLQMKTTISTILRRYKILPGD 168
A LQ+ + I+++Y I+ D
Sbjct: 436 AELQLHLALCWIIQKYDIVATD 457
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYT 86
R+ E+ +V+G ++ L RL L++V+KE++RL+P A R E
Sbjct: 279 RLQAEVDEVIGSK--RYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVR 336
Query: 87 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
+P + Y + R + +P F+PDRF P R Y PFSLG R CIG ++
Sbjct: 337 VPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFT--YFPFSLGHRSCIGQQF 394
Query: 147 AMLQMKTTISTILRR--YKILPGDK 169
A +++K ++ +L+R ++++PG +
Sbjct: 395 AQMEVKVVMAKLLQRLEFRLVPGQR 419
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
+V E+ ++G P+ P++D ++ V+ E +R P+ I + + Y
Sbjct: 309 QVQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGY 366
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
+IP G ++ +Y +H + W +P F P+RFL S VPFSLG R C+G
Sbjct: 367 SIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEH 426
Query: 146 YAMLQMKTTISTILRRYKI-LPGDKCKSLQDIRFEFGMTMRSLP 188
A ++M + +L+R+ + P + + D++ GMT++ P
Sbjct: 427 LARMEMFLFFTALLQRFHLHFPHE---LVPDLKPRLGMTLQPQP 467
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
+V E+ ++G P+ P++D ++ V+ E +R P+ I + + Y
Sbjct: 309 QVQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGY 366
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
+IP G ++ +Y +H + W +P F P+RFL S VPFSLG R C+G
Sbjct: 367 SIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEH 426
Query: 146 YAMLQMKTTISTILRRYKI-LPGDKCKSLQDIRFEFGMTMRSLP 188
A ++M + +L+R+ + P + + D++ GMT++ P
Sbjct: 427 LARMEMFLFFTALLQRFHLHFPHE---LVPDLKPRLGMTLQPQP 467
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IA 73
+HP +EA +V+ E+ V+G + P ++ ++ + VI E R P+ +A
Sbjct: 297 KHPEVEA-----KVHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA 349
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R + + D+ +P G + + + R P ++NP F+P FL + + +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
FS+G R C G A +++ +T+++ +++
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IA 73
+HP +EA +V+ E+ V+G + P ++ ++ + VI E R P+ +A
Sbjct: 297 KHPEVEA-----KVHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA 349
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R + + D+ +P G + + + R P ++NP F+P FL + + +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
FS+G R C G A +++ +T+++ +++
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IA 73
+HP +EA +V+ E+ V+G + P ++ ++ + VI E R P+ +A
Sbjct: 297 KHPEVEA-----KVHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLA 349
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R + + D+ +P G + + + R P ++NP F+P FL + + +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
FS+G R C G A +++ +T+++ +++
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IA 73
+HP +EA +V+ E+ V+G + P ++ ++ + VI E R P+ +A
Sbjct: 297 KHPEVEA-----KVHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA 349
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R + + D+ +P G + + + R P ++NP F+P FL + + +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
FS+G R C G A +++ +T+++ +++
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IA 73
+HP +EA +V+ E+ V+G + P ++ ++ + VI E R P+ +A
Sbjct: 297 KHPEVEA-----KVHEEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA 349
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R + + D+ +P G + + + R P ++NP F+P FL + + +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
FS+G R C G A +++ +T+++ +++
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRL 440
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
++HP +E + E+Q V+G+ D +Q+L ++ I E+MR P ++
Sbjct: 323 AKHPNVEEA-----IIKEIQTVIGERDIKI---DDIQKLKVMENFIYESMRYQPVVDLVM 374
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYV- 132
R A + Y + G +I + I +HR + + PN+F + F + P Y
Sbjct: 375 RKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENF-----AKNVPYRYFQ 428
Query: 133 PFSLGPRGCIGSKYAMLQMKTTISTILRRY--KILPGDKCKSLQDI 176
PF GPRGC G AM+ MK + T+LRR+ K L G +S+Q I
Sbjct: 429 PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKI 474
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
Query: 45 TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 104
T + L+++ L +V++E +RL P R + Q + P G ++ I H P
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADP 353
Query: 105 QLWNNPNQFDPDRFLPSQSSHRNPS-GYVPFSLGPRGCIGSKYAMLQMKTTISTILRR-- 161
L+ +P +FDP+RF P S+ NP +VPF G R C+G ++A L+MK + ++++
Sbjct: 354 DLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFD 413
Query: 162 YKILPGDKCK 171
+ +LPG +
Sbjct: 414 WTLLPGQNLE 423
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 25 SFRVY------HELQDVLGDSP----DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIAR 74
SF +Y HELQ ++ D P+Y Q+++L + V+ E +RL+P AP +
Sbjct: 274 SFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 75 SAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS--- 129
A + V G+Y + G + + I LHR +W ++ +F P+RF NPS
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIP 386
Query: 130 --GYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ PF G R CIG ++A+ + + +L+ +
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
LQ + LL IKET+RL P + + R ++ DY IPA + + IY L R P +
Sbjct: 328 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFF 387
Query: 109 NPNQFDPDRFLPSQSSHRNPSGY--VPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILP 166
+P FDP R+L S +N + + + F G R C+G + A L+M + +L +++
Sbjct: 388 DPENFDPTRWL---SKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV-- 442
Query: 167 GDKCKSLQDIRFEFGMTM 184
+ + L D+ F + +
Sbjct: 443 --EIQHLSDVGTTFNLIL 458
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 25 SFRVY------HELQDVLGDSP----DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIAR 74
SF +Y H LQ V ++ D P+Y Q+++L + V+ E +RL+P AP +
Sbjct: 274 SFALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 75 SAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS--- 129
A + V G+Y + G + + I LHR +W ++ +F P+RF NPS
Sbjct: 334 YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF-------ENPSAIP 386
Query: 130 --GYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ PF G R CIG ++A+ + + +L+ +
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G I + I
Sbjct: 306 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQ 365
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 366 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 418
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 419 VLGMMLKHF 427
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
LQ + LL IKET+RL P + + R ++ DY IPA + + IY L R P +
Sbjct: 331 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFF 390
Query: 109 NPNQFDPDRFLPSQSSHRNPSGY--VPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILP 166
+P FDP R+L S +N + + + F G R C+G + A L+M + +L +++
Sbjct: 391 DPENFDPTRWL---SKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV-- 445
Query: 167 GDKCKSLQDIRFEFGMTM 184
+ + L D+ F + +
Sbjct: 446 --EIQHLSDVGTTFNLIL 461
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
LQ + LL IKET+RL P + + R ++ DY IPA + + IY + R P ++
Sbjct: 332 LQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFS 391
Query: 109 NPNQFDPDRFLPSQSS---HRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
+P++FDP R+L RN + F G R C+G + A L+M + IL +K+
Sbjct: 392 SPDKFDPTRWLSKDKDLIHFRN----LGFGWGVRQCVGRRIAELEMTLFLIHILENFKV 446
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGKQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 303 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 363 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 415
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 416 VLGMMLKHF 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 413
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 414 VLGMMLKHF 422
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 413
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 414 VLGMMLKHF 422
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 25 SFRVY------HELQDVLGDSP----DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIAR 74
SF +Y HELQ ++ D P++ Q+++L + V+ E +RL+P AP +
Sbjct: 275 SFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 75 SAPYE-VQCGDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS--- 129
A + V G+Y + G + + I LHR +W ++ +F P+RF NPS
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF-------ENPSAIP 387
Query: 130 --GYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ PF G R CIG ++A+ + + +L+ +
Sbjct: 388 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 413
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 414 VLGMMLKHF 422
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IA 73
+HP +EA +V+ E+ V+G + P ++ ++ VI E R P+ +A
Sbjct: 297 KHPEVEA-----KVHEEIDRVIGK--NRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLA 349
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
+ + D+ +P G + + + R P+ ++NP F+P FL + + +VP
Sbjct: 350 HRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVP 409
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
FS+G R C G A +++ +TI++ ++
Sbjct: 410 FSIGKRYCFGEGLARMELFLFFTTIMQNFRF 440
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 36 LGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAI 95
+ + P A T L LL +KET+RL+P + R ++ +Y IPAG + +
Sbjct: 325 ISEHPQKATT-----ELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQV 379
Query: 96 FIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
F+Y L R+ L+ P +++P R+L + S RN +VPF G R C+G +
Sbjct: 380 FLYSLGRNAALFPRPERYNPQRWLDIRGSGRN-FHHVPFGFGMRQCLGRR 428
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P +P + A + V G+Y + G + + I
Sbjct: 303 DPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 363 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 415
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 416 VLGMMLKHF 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + P+ G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPYGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P P + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 413
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 414 VLGMMLKHF 422
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 413
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 414 VLGMMLKHF 422
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P P + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P P + A + V G+Y + G + + I
Sbjct: 303 DPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 363 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 415
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 416 VLGMMLKHF 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + P+ G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPWGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQC-GDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +R++P AP + A + G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQ 360
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R CIG ++A+ +
Sbjct: 361 LHRDKTVWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATL 413
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 414 VLGMMLKHF 422
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 28 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 87
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGDG--RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 88 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
G +A +R P+ + +P+ F P R+ P Q N ++PF G C+G+ +
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 147 AMLQMKTTISTILRRYK 163
A++Q+K S +LR Y+
Sbjct: 400 AIMQIKAIFSVLLREYE 416
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 28 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 87
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGDG--RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 88 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
G +A +R P+ + +P+ F P R+ P Q N ++PF G C+G+ +
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 147 AMLQMKTTISTILRRYK 163
A++Q+K S +LR Y+
Sbjct: 400 AIMQIKAIFSVLLREYE 416
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 28 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 87
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGDG--RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 88 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
G +A +R P+ + +P+ F P R+ P Q N ++PF G C+G+ +
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 147 AMLQMKTTISTILRRYK 163
A++Q+K S +LR Y+
Sbjct: 400 AIMQIKAIFSVLLREYE 416
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 28 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 87
V EL ++ GD + ++ L+++ L V+KET+RL P ++ R A E + + I
Sbjct: 282 VIDELDELYGDG--RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 88 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRF-LPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
G +A +R P+ + +P+ F P R+ P Q N ++PF G C+G+ +
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 147 AMLQMKTTISTILRRYK 163
A++Q+K S +LR Y+
Sbjct: 400 AIMQIKAIFSVLLREYE 416
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R C G ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACEGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + P G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPHGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 300 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + P G R CIG ++A+ +
Sbjct: 360 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPAGNGQRACIGQQFALHEATL 412
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 413 VLGMMLKHF 421
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 41 DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE-VQCGDYTIPAGASIAIFIYG 99
D P+Y Q+++L + V+ E +RL+P AP + A + V G+Y + G + + I
Sbjct: 301 DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 100 LHRHPQLW-NNPNQFDPDRFLPSQSSHRNPS-----GYVPFSLGPRGCIGSKYAMLQMKT 153
LHR +W ++ +F P+RF NPS + PF G R C G ++A+ +
Sbjct: 361 LHRDKTIWGDDVEEFRPERF-------ENPSAIPQHAFKPFGNGQRACPGQQFALHEATL 413
Query: 154 TISTILRRY 162
+ +L+ +
Sbjct: 414 VLGMMLKHF 422
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 23 ESSFRVYHELQDVLGDSPD-SAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEV 80
E R+ EL LG S TY RL LL I E +RL P P+ +
Sbjct: 311 EIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPS 370
Query: 81 QCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRG 140
Y IP G + + G H +W P++F PDRFL + NPS + F G R
Sbjct: 371 SIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGA---NPSA-LAFGCGARV 426
Query: 141 CIGSKYAMLQMKTTISTILRRYKILP 166
C+G A L++ ++ +L+ + +LP
Sbjct: 427 CLGESLARLELFVVLARLLQAFTLLP 452
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 45 TYDQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 103
YD + + R ++E++R P ++ R EV+ G Y +P G IA H
Sbjct: 302 NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 361
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ + NP +DP+R + ++ F G CIG K+A+LQ+KT ++T R Y
Sbjct: 362 EEAFPNPRLWDPER------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 414
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 45 TYDQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 103
YD + + R ++E++R P ++ R EV+ G Y +P G IA H
Sbjct: 308 NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 367
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ + NP +DP+R + ++ F G CIG K+A+LQ+KT ++T R Y
Sbjct: 368 EEAFPNPRLWDPER------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 420
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 45 TYDQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 103
YD + + R ++E++R P ++ R EV+ G Y +P G IA H
Sbjct: 317 NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 376
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ + NP +DP+R + ++ F G CIG K+A+LQ+KT ++T R Y
Sbjct: 377 EEAFPNPRLWDPER------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREY 429
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 304 RVQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP + + P+ + PN F+P FL + + + G++PFSLG R C+G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
Query: 146 YAMLQMKTTISTILRRYKI 164
A ++ +TIL+ + I
Sbjct: 422 IARTELFLFFTTILQNFSI 440
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 304 RVQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP + + P+ + PN F+P FL + + + G++PFSLG R C+G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
Query: 146 YAMLQMKTTISTILRRYKI 164
A ++ +TIL+ + I
Sbjct: 422 IARTELFLFFTTILQNFSI 440
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 304 RVQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP + + P+ + PN F+P FL + + + G++PFSLG R C+G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
Query: 146 YAMLQMKTTISTILRRYKI 164
A ++ +TIL+ + I
Sbjct: 422 IARTELFLFFTTILQNFSI 440
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 304 RVQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP + + P+ + PN F+P FL + + + G++PFSLG R C+G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
Query: 146 YAMLQMKTTISTILRRYKI 164
A ++ +TIL+ + I
Sbjct: 422 IARTELFLFFTTILQNFSI 440
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E+ DV+G P + T VI E R P+ + +++ +
Sbjct: 308 RVQQEIDDVIGQV--RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGF 365
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G ++ + + + +W P +F P+ FL +Q P ++PFS G R C+G
Sbjct: 366 RIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEP 425
Query: 146 YAMLQMKTTISTILRRY 162
A +++ +++L+ +
Sbjct: 426 LARMELFLFFTSLLQHF 442
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 304 RVQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP + + P+ + PN F+P FL + + + G++PFSLG R C G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAGEG 421
Query: 146 YAMLQMKTTISTILRRYKI 164
A ++ +TIL+ + I
Sbjct: 422 IARTELFLFFTTILQNFSI 440
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 1 MFGVDFEIQRN--HYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRV 58
+FG E YS L+ E + RV E++ V+G +P R+ V
Sbjct: 273 LFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRH--RSPCMQDRSRMPYTDAV 330
Query: 59 IKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
I E R P + + +V+ +Y IP G I + + + + NP FDP
Sbjct: 331 IHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGH 390
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
FL + + ++PFS G R C+G A +++ +++IL+ +K+
Sbjct: 391 FLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKL 437
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E+ DV+G P + T VI E R P+ + +++ +
Sbjct: 308 RVQQEIDDVIGQV--RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGF 365
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G ++ + + + +W P +F P+ FL +Q P ++PFS G R C+G
Sbjct: 366 RIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEP 425
Query: 146 YAMLQMKTTISTILRRY 162
A +++ +++L+ +
Sbjct: 426 LARMELFLFFTSLLQHF 442
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RVY E++ V+G P P ++ VI E R P+ + Y
Sbjct: 304 RVYREIEQVIG--PHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGY 361
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP + + + P + P+ F+PD FL + + + ++PFSLG R C+G
Sbjct: 362 IIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEG 421
Query: 146 YAMLQMKTTISTILRRYKI 164
A ++ +TIL+ + +
Sbjct: 422 IARAELFLFFTTILQNFSM 440
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 23 ESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQC 82
E + +V E++ V+G + +P + V+ E R P S P+ V C
Sbjct: 299 EVTAKVQEEIERVIGR--NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT---SLPHAVTC 353
Query: 83 G----DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP 138
+Y IP G +I I + + + + NP FDP FL + + ++PFS G
Sbjct: 354 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 413
Query: 139 RGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQD 175
R C+G A +++ +++IL+ + + KSL D
Sbjct: 414 RICVGEALAGMELFLFLTSILQNFNL------KSLVD 444
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 23 ESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQC 82
E + +V E++ V+G + +P + V+ E R P S P+ V C
Sbjct: 301 EVTAKVQEEIERVIGR--NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT---SLPHAVTC 355
Query: 83 G----DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP 138
+Y IP G +I I + + + + NP FDP FL + + ++PFS G
Sbjct: 356 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 415
Query: 139 RGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQD 175
R C+G A +++ +++IL+ + + KSL D
Sbjct: 416 RICVGEALAGMELFLFLTSILQNFNL------KSLVD 446
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 10/175 (5%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IA 73
+HP + A +V E+ V+G +P + V+ E R P +
Sbjct: 297 KHPEVTA-----KVQEEIDHVIGRH--RSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVP 349
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
+ + + +Y IP G +I + + + + NPN FDP FL + + ++P
Sbjct: 350 HAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMP 409
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLP 188
FS G R C G A +++ ++TIL+ + + D K+L G+ SLP
Sbjct: 410 FSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAVTKGIV--SLP 462
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 45 TYDQ-LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 103
YD ++ + + +E++R P ++ R VQ G Y +P G IA H+
Sbjct: 303 NYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQD 362
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ + NP +++P+R + + F G CIG K+ +LQ+KT ++T+LR Y
Sbjct: 363 EEAFPNPREWNPERNMKLVDG-----AFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDY 416
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
VI+ETMR P +++R A ++ G +T+P G ++ + + HR P + P++FDPDR
Sbjct: 292 VIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR 351
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+Q H + F G C+G+ A L+ + + R+
Sbjct: 352 ---AQIRH------LGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 57 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
R +E++R P ++ R +V+ G Y +P G IA H + + P ++DP+
Sbjct: 318 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 377
Query: 117 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 378 R------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 417
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 57 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
R +E++R P ++ R +V+ G Y +P G IA H + + P ++DP+
Sbjct: 317 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
Query: 117 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 377 R------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 57 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
R +E++R P ++ R +V+ G Y +P G IA H + + P ++DP+
Sbjct: 317 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
Query: 117 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 377 R------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 416
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 57 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
R +E++R P ++ R +V+ G Y +P G IA H + + P ++DP+
Sbjct: 316 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 375
Query: 117 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 376 R------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 415
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 57 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
R +E++R P ++ R +V+ G Y +P G IA H + + P ++DP+
Sbjct: 330 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
Query: 117 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 390 R------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 57 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
R +E++R P ++ R +V+ G Y +P G IA H + + P ++DP+
Sbjct: 330 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
Query: 117 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
R + ++ F G CIG K+ +LQ+KT ++T R Y
Sbjct: 390 R------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY 429
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 59 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR-HPQLWNNPNQFDPDR 117
+E +RL+P A ++ R + G+ +P G ++ + Y R H + + F P+R
Sbjct: 258 FQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH---FPDGEAFRPER 314
Query: 118 FLPSQSSHRNPSG-YVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI--LPGDKCKSLQ 174
FL + + PSG Y PF LG R C+G +A+L+ + RR+++ LP + +
Sbjct: 315 FLEERGT---PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQV 371
Query: 175 DIRFEFGMTMRSLPGNDIR 193
+R E G+ R P ++R
Sbjct: 372 TLRPEGGLPAR--PREEVR 388
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 59 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 118
+E +RL+P A ++ R + G+ +P G ++ + Y R + F P+RF
Sbjct: 258 FQEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERF 315
Query: 119 LPSQSSHRNPSG-YVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI--LPGDKCKSLQD 175
L + + PSG Y PF LG R C+G +A+L+ + RR+++ LP + +
Sbjct: 316 LAERGT---PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQVT 372
Query: 176 IRFEFGMTMRSLPG 189
+R E G+ R G
Sbjct: 373 LRPEGGLPARPREG 386
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 23 ESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQC 82
E + +V E++ V+G + +P + V+ E R P S P+ V C
Sbjct: 301 EVTAKVQEEIERVVGR--NRSPCMQDRGHMPYTDAVVHEVQRYIDLIPT---SLPHAVTC 355
Query: 83 G----DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP 138
+Y IP G +I + + + + NP FDP FL + + + ++PFS G
Sbjct: 356 DVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGK 415
Query: 139 RGCIGSKYAMLQMKTTISTILRRYKI 164
R C+G A +++ ++ IL+ + +
Sbjct: 416 RICVGEGLARMELFLFLTFILQNFNL 441
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 11/164 (6%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV EL V+G D P L + + E MR PV I + Y
Sbjct: 315 RVQAELDQVVGR--DRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGY 372
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQS--SHRNPSGYVPFSLGPRGCIG 143
IP + + + ++ P W NP FDP RFL + S + FS+G R CIG
Sbjct: 373 HIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIG 432
Query: 144 SKYAMLQMKTTISTILRR--YKILPGDKCKSLQDIRFEFGMTMR 185
+ + +Q+ IS + + ++ P + K + F +G+T++
Sbjct: 433 EELSKMQLFLFISILAHQCDFRANPNEPAK----MNFSYGLTIK 472
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 46 YDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 105
+ +++ +L + I+E +R P R V+ GD TI G + ++I +R +
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 106 LWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 163
++++ +F PD RNP+ ++ F G C+G+ A L+ + I +R++
Sbjct: 291 VFHDGEKFIPD---------RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 46 YDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 105
+ +++ +L + I+E +R P R V+ GD TI G + ++I +R +
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 106 LWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 163
++++ +F PD RNP+ ++ F G C+G+ A L+ + I +R++
Sbjct: 291 VFHDGEKFIPD---------RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDY 85
++ EL V+G + P +L L I ET R P I S + +
Sbjct: 318 KIQKELDTVIGR--ERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGF 375
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNP---SGYVPFSLGPRGCI 142
IP + + + ++ P+LW +P++F P+RFL + + N + F +G R CI
Sbjct: 376 YIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCI 435
Query: 143 GSKYAMLQMKTTISTILRR--YKILPGDKCKSLQDIRFEFGMTMR 185
G A ++ ++ +L++ + + PG K D+ +G+TM+
Sbjct: 436 GEVLAKWEIFLFLAILLQQLEFSVPPGVKV----DLTPIYGLTMK 476
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 53 DLLTRVIKETMRLFPAAPVI-ARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPN 111
DL+ + E +R+ A I R A +++ T+PA + + G + P+ +++P
Sbjct: 280 DLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 112 QFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
+ D HR + +V F G C+G A L+++ + T+LRR L
Sbjct: 340 RVD---------FHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTL 384
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 18/153 (11%)
Query: 48 QLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 103
+LQRL L +E +R R+ EV+ G I G + +F+ +R
Sbjct: 271 ELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRD 330
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 163
P+ W++P+ +D R SG+V F G C+G A L+ + +S + R+
Sbjct: 331 PRRWSDPDLYD---------ITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVA 381
Query: 164 ILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEP 196
+ D ++ F T+R L +++ P
Sbjct: 382 AIDIDG-----PVKRRFNNTLRGLESLPVKLTP 409
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+QL +L DL+ ++E +R + AR A ++ TI G + + + +R
Sbjct: 255 EQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANR 314
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
P ++ NP+ FD R+P+ ++ F G C+GS A L+ + I+T+L+R
Sbjct: 315 DPSIFTNPDVFDIT---------RSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQR 364
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 21/149 (14%)
Query: 11 NHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAP 70
H + +L + R + ++ D L +P+S P ++E MR P
Sbjct: 255 GHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPA------------AVEELMRYDPPVQ 302
Query: 71 VIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSG 130
+ R A +++ GD+ IP G+ + + +R P + +P+ D HR
Sbjct: 303 AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD---------VHRAAER 353
Query: 131 YVPFSLGPRGCIGSKYAMLQMKTTISTIL 159
V F LG C+G+ A + + + +L
Sbjct: 354 QVGFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
+++ E+ V+G P P Q + + V+ E R P + A + Y
Sbjct: 303 KLHEEIDRVIG--PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGY 360
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G + + + Q + +P +F P+ FL + + PFS G R C G
Sbjct: 361 LIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEG 420
Query: 146 YAMLQMKTTISTILRRYKILP 166
A +++ + IL+ + + P
Sbjct: 421 LARMELFLLLCAILQHFNLKP 441
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 50 QRLDLLTR-------VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+++D+L R V++E +R + I R A +++ G TI AG ++ + I ++R
Sbjct: 264 EQIDVLLRDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNR 323
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
+ + NP+ FD + RN +V F G C+G A +++ + + R
Sbjct: 324 DAKAYENPDIFD---------ARRNARHHVGFGHGIHQCLGQNLARAELEIALGGLFAR 373
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYEVQCGDY 85
++ EL V+G S P L + I ET R P I S + +
Sbjct: 315 KIQEELDTVIGRS--RRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGF 372
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFL-PSQSSHRNPS-GYVPFSLGPRGCIG 143
IP G + + + ++ +LW NP++F P+RFL P + + S + F +G R CIG
Sbjct: 373 YIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIG 432
Query: 144 SKYAMLQMKTTISTILRR--YKILPGDKCKSLQDIRFEFGMTMR 185
A ++ ++ +L+R + + G K D+ +G+TM+
Sbjct: 433 ETIARWEVFLFLAILLQRVEFSVPLGVKV----DMTPIYGLTMK 472
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
D+ RL L +E +R R+ +V+ TI G + +F+ +R
Sbjct: 272 DEFARLRADPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANR 331
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P+ W++P+++D R SG+V F G C+G A L+ + ++ + R+
Sbjct: 332 DPRRWDDPDRYD---------ITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKV 382
Query: 163 KILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEP 196
+ + ++ F T+R L I++ P
Sbjct: 383 AAI-----EIAGPLKRRFNNTLRGLESLPIQLTP 411
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
+I E +R+ P R +V+ G I AG+ I I +R P+++++P+ FD R
Sbjct: 267 IINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 326
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 163
P +S RN S F LGP C G + + T + + RY+
Sbjct: 327 --PPAAS-RNLS----FGLGPHSCAGQIISRAEATTVFAVLAERYE 365
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
+I E +R+ P R +V+ G I AG+ I I +R P+++++P+ FD R
Sbjct: 269 IINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR 328
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 163
P +S RN S F LGP C G + + T + + RY+
Sbjct: 329 --PPAAS-RNLS----FGLGPHSCAGQIISRAEATTVFAVLAERYE 367
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 59 IKETMRLFPAAP-VIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
++E +R F A V +R A +V+ G +I AG + + + + P ++ +P D +R
Sbjct: 282 VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER 341
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
++ F GP C+G A ++++ T+ RR
Sbjct: 342 ---------GARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 57 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCK-SL 173
R+P+ +V F GP C G A L+ + + +L R +PG K +
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLKLAVAP 383
Query: 174 QDIRFEFGMTMRS 186
+D+ F+ G +R
Sbjct: 384 EDVPFKKGALIRG 396
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 57 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCK-SL 173
R+P+ +V F GP C G A L+ + + +L R +PG K +
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLKLAVAP 383
Query: 174 QDIRFEFGMTMRS 186
+D+ F+ G +R
Sbjct: 384 EDVPFKKGALIRG 396
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 57 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCK-SL 173
R+P+ +V F GP C G A L+ + + +L R +PG K +
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLKLAVAP 383
Query: 174 QDIRFEFGMTMRS 186
+D+ F+ G +R
Sbjct: 384 EDVPFKKGALIRG 396
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 57 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCK-SL 173
R+P+ +V F GP C G A L+ + + +L R +PG K +
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLKLAVAP 383
Query: 174 QDIRFEFGMTMRS 186
+D+ F+ G +R
Sbjct: 384 EDVPFKKGALIRG 396
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 57 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCK-SL 173
R+P+ +V F GP C G A L+ + + +L R +PG K +
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLKLAVAP 383
Query: 174 QDIRFEFGMTMRS 186
+D+ F+ G +R
Sbjct: 384 EDVPFKKGALIRG 396
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 57 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCK-SL 173
R+P+ +V F GP C G A L+ + + +L R +PG K +
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLKLAVAP 383
Query: 174 QDIRFEFGMTMRS 186
+D+ F+ G +R
Sbjct: 384 EDVPFKKGALIRG 396
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 57 RVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
R I E +R P A ++R A +V+ I AG ++ + +R P+++ +P++ D
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCK-SL 173
R+P+ +V F GP C G A L+ + + +L R +PG K +
Sbjct: 336 ---------FERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDR---VPGLKLAVAP 383
Query: 174 QDIRFEFGMTMRS 186
+D+ F+ G +R
Sbjct: 384 EDVPFKKGALIRG 396
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 35 VLGDSPDSAPTYDQLQRLD--LLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGA 91
+L DSPD L R D L+ ++E +R R A +V+ G I G
Sbjct: 252 LLLDSPDQL----ALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE 307
Query: 92 SIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQM 151
+ + P P +FD R P+ ++ F G CIG + A +++
Sbjct: 308 QVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAFGFGAHQCIGQQLARIEL 358
Query: 152 KTTISTILRRYKILPGDK-CKSLQDIRFEFGMT 183
+ T+ RR LPG + K ++++RF M
Sbjct: 359 QIVFETLFRR---LPGLRLAKPVEELRFRHDMV 388
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 35 VLGDSPDSAPTYDQLQRLD--LLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGA 91
+L DSPD L R D L+ ++E +R R A +V+ G I G
Sbjct: 252 LLLDSPDQL----ALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE 307
Query: 92 SIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQM 151
+ + P P +FD R P+ ++ F G CIG + A +++
Sbjct: 308 QVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAFGFGAHQCIGQQLARIEL 358
Query: 152 KTTISTILRRYKILPGDK-CKSLQDIRFEFGMT 183
+ T+ RR LPG + K ++++RF M
Sbjct: 359 QIVFETLFRR---LPGLRLAKPVEELRFRHDMV 388
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 57 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
+ ++E +R P R +V+ D I G + ++I +R +++ +P+ F PD
Sbjct: 242 KAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD 301
Query: 117 RFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKI 164
R P+ ++ F G C+G+ A L+ + + +++++
Sbjct: 302 R---------TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRV 340
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 53 DLLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPN 111
+L + ++E +R P PV A R A + + IP G + + + HR P+++ + +
Sbjct: 284 ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 343
Query: 112 QFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
+FD + + + + F GP C+G+ A L++ ++ + R
Sbjct: 344 RFD--------ITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 385
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 53 DLLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPN 111
+L + ++E +R P PV A R A + + IP G + + + HR P+++ + +
Sbjct: 274 ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 333
Query: 112 QFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
+FD + + + + F GP C+G+ A L++ ++ + R
Sbjct: 334 RFD--------ITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 375
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
++E +RL +AR+ +V GD TIPAG + + +YG + Q+ PD
Sbjct: 285 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYGSAN-----RDERQYGPD- 337
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R P + FS G C+G+ A +Q + ++ +L R
Sbjct: 338 -AAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
++E +RL +AR+ +V GD TIPAG + + +YG + Q+ PD
Sbjct: 286 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYGSAN-----RDERQYGPD- 338
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R P + FS G C+G+ A +Q + ++ +L R
Sbjct: 339 -AAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 381
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
++E +RL +AR+ +V GD TIPAG + + +YG + Q+ PD
Sbjct: 285 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRV-LLLYGSAN-----RDERQYGPD- 337
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R P + FS G C+G+ A +Q + ++ +L R
Sbjct: 338 -AAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLAR 380
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 20/148 (13%)
Query: 35 VLGDSPDSAPTYDQLQRLD--LLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGA 91
+L DSPD L R D L+ ++E +R R A +V+ G I G
Sbjct: 252 LLLDSPDQL----ALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE 307
Query: 92 SIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQM 151
+ + P P +FD R P+ ++ F G CIG + A +++
Sbjct: 308 QVVAHVLAADFDPAFVEEPERFD---------ITRRPAPHLAFGFGAHQCIGQQLARIEL 358
Query: 152 KTTISTILRRYKILPGDK-CKSLQDIRF 178
+ T+ RR LPG + K ++++RF
Sbjct: 359 QIVFETLFRR---LPGLRLAKPVEELRF 383
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
+++E +R P P + R+ + IPA + ++ +R ++P++FDP R
Sbjct: 277 IVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR 336
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 169
+ + F G C+G+ A L+ + + I+ R+ L D+
Sbjct: 337 -------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDR 381
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
+++E +R P P + R+ + IPA + ++ +R ++P++FDP R
Sbjct: 297 IVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR 356
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 169
+ + F G C+G+ A L+ + + I+ R+ L D+
Sbjct: 357 -------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDR 401
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 371
Query: 162 Y 162
+
Sbjct: 372 F 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 371
Query: 162 Y 162
+
Sbjct: 372 F 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 371
Query: 162 Y 162
+
Sbjct: 372 F 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 260 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 320 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 372
Query: 162 Y 162
+
Sbjct: 373 F 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 371
Query: 162 Y 162
+
Sbjct: 372 F 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 371
Query: 162 Y 162
+
Sbjct: 372 F 372
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 261 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 320
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 321 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 373
Query: 162 Y 162
+
Sbjct: 374 F 374
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 371
Query: 162 Y 162
+
Sbjct: 372 F 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 260 DQLAQLKANPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 320 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 372
Query: 162 Y 162
+
Sbjct: 373 F 373
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 260 DQLAQLKANPSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 320 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 372
Query: 162 Y 162
+
Sbjct: 373 F 373
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 260 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 320 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 372
Query: 162 Y 162
+
Sbjct: 373 F 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R A A I R+A +V GD + A I +
Sbjct: 259 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P Q +P G F G CI A ++ T ST+ ++
Sbjct: 319 RDEEVFENPDEFNMNRKWPPQ----DPLG---FGFGDHRCIAEHLAKAELTTVFSTLYQK 371
Query: 162 Y 162
+
Sbjct: 372 F 372
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYG 99
DQL L LL ++E +R PV + + + V+ D IPAG ++ + +
Sbjct: 284 DQLAALRADMTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLAD 341
Query: 100 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159
HR P+ + +P++FD R+ +G++ F G CIG+ A L+ + + +L
Sbjct: 342 AHRTPERFPDPHRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALL 392
Query: 160 RR 161
R
Sbjct: 393 ER 394
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYG 99
DQL L LL ++E +R PV + + + V+ D IPAG ++ + +
Sbjct: 284 DQLAALRADMTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLAD 341
Query: 100 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159
HR P+ + +P++FD R+ +G++ F G CIG+ A L+ + + +L
Sbjct: 342 AHRTPERFPDPHRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALL 392
Query: 160 RR 161
R
Sbjct: 393 ER 394
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDY---TIPAGASIAIFIYG 99
DQL L LL ++E +R PV + + + V+ D IPAG ++ + +
Sbjct: 284 DQLAALRADMTLLDGAVEEMLRY--EGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLAD 341
Query: 100 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159
HR P+ + +P++FD R+ +G++ F G CIG+ A L+ + + +L
Sbjct: 342 AHRTPERFPDPHRFD---------IRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALL 392
Query: 160 RR 161
R
Sbjct: 393 ER 394
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 54 LLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQF 113
L+ R++ E +R R+A + + I G I + +R ++++NP++F
Sbjct: 299 LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEF 358
Query: 114 DPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 163
D RF P+ ++ F G C+G A L+MK +L + K
Sbjct: 359 DITRF---------PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLK 399
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 109 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 164
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 328 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 59 IKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRF 118
++E R +P P + + + G S+ + +YG + P+LW++P++F P+RF
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Query: 119 LPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159
+ + + P G G R C G + MK ++ ++
Sbjct: 340 AEREENLFDMIPQGGGHAEKGHR-CPGEGITIEVMKASLDFLV 381
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 52 LDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPN 111
+DLL I+E +R + R+ + + AG I + + ++ +P+
Sbjct: 263 VDLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPD 322
Query: 112 QFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
F DR NP+ +V F G C+G++ A L+++ +LRR
Sbjct: 323 NFRIDR---------NPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRR 363
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 48 QLQRLDLLTRVIKETMRLFPAAPVIARSAPYE----VQCGDYTIPAGASIAIFIYGLHRH 103
+L L +L +IKE++RL A+ I R+A + ++ G Y I IA++ +H
Sbjct: 322 ELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNP---SG------YVPFSLGPRGCIGSKYAMLQMKTT 154
P+++ +P F DR+L + +G Y+PF G C G +A+ ++K
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 155 ISTILRRY--KILPGD-KCKSLQDIRFEFGMTMRSLPGNDIRIE 195
+ +L + +++ G KC L R G+ P NDI +
Sbjct: 441 LILMLSYFELELIEGQAKCPPLDQSRAGLGILP---PLNDIEFK 481
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 48 QLQRLDLLTRVIKETMRLFPAAPVIARSAPYE----VQCGDYTIPAGASIAIFIYGLHRH 103
+L L +L +IKE++RL A+ I R+A + ++ G Y I IA++ +H
Sbjct: 322 ELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNP---SG------YVPFSLGPRGCIGSKYAMLQMKTT 154
P+++ +P F DR+L + +G Y+PF G C G +A+ ++K
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 155 ISTILRRY--KILPGD-KCKSLQDIRFEFGMTMRSLPGNDIRIE 195
+ +L + +++ G KC L R G+ P NDI +
Sbjct: 441 LILMLSYFELELIEGQAKCPPLDQSRAGLGILP---PLNDIEFK 481
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 109 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 164
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 320 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 378
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 109 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 164
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 320 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 378
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 109 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 164
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 320 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 378
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 109 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 164
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 328 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
+Q+ D ++E R +P P + A + + P G + + +YG + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 109 NPNQFDPDRFLPSQSSHRN--PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR--RYKI 164
+P +F P+RF N P G LG R C G + MK ++ RY +
Sbjct: 328 DPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 13/141 (9%)
Query: 46 YDQLQRL-DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 104
+D LQR LL I+E +R + R + + + AG + + +
Sbjct: 253 WDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDE 312
Query: 105 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR--- 161
++ P +FD RNP+ ++ F G C+G++ A L++ +LRR
Sbjct: 313 AVFCEPEKFD---------VQRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPD 363
Query: 162 YKILPGDKCKSLQDIRFEFGM 182
+++ D L+ F G+
Sbjct: 364 LRLVADDSVLPLRPANFVSGL 384
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDR 117
V++E +R A + R +V +P+G + ++ +R P +++P+ F P
Sbjct: 290 VVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPG- 348
Query: 118 FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 163
R P+ ++ F G C+GS A +++ + + R
Sbjct: 349 --------RKPNRHITFGHGMHHCLGSALARIELSVVLRVLAERVS 386
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 55 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
R+ G++ F G C+G A L+ + + + R+ L
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL 374
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 55 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
R+ G++ F G C+G A L+ + + + R+ L
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL 374
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 55 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
R+ G++ F G C+G A L+ + + + R+ L
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL 375
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 55 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
R+ G++ F G C+G A L+ + + + R+ L
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL 375
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 55 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
L ++E +R R A EV+ G IP +++ + +R P+ + +P++FD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
R+ G++ F G C+G A L+ + + + R+ L
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL 375
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 50 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 109 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
NP + DR NP+ ++ F G C+GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCLGSALGRRHAQIGIEALLKK---MPG 368
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Query: 55 LTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD 114
L ++E +R R A EV+ G IP +++ + +R P + +P++FD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFD 332
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
R+ G++ F G C+G A L+ + + + R+ L
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL 374
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 53 DLLTRVIKETMRLFPAAPVIA--RSAPYEVQCGDYTIPAGASIAIFIYGL-HRHPQLWNN 109
D++ R ++E +R A + R A +++ G TI AG + +F GL + + +
Sbjct: 272 DVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAG-DLVLFDLGLPNFDERAFTG 330
Query: 110 PNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P +FD + R P+ ++ F G CIG+ A L+++T + + R
Sbjct: 331 PEEFD---------AARTPNPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRL 374
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA------RSAPYEV 80
R+ E++ V+ S T +++++L V+ E +R P PV A + E
Sbjct: 320 RLAEEIRSVI-KSNGGELTMGAIEKMELTKSVVYECLRFEP--PVTAQYGRAKKDLVIES 376
Query: 81 QCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSH--------RNPSGYV 132
+ + AG + + R P++++ ++F P+RF+ + P
Sbjct: 377 HDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETET 436
Query: 133 PFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P ++G + C G + +L + + I RRY
Sbjct: 437 P-TVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA------RSAPYEV 80
R+ E++ V+ S T +++++L V+ E +R P PV A + E
Sbjct: 320 RLAEEIRSVI-KSNGGELTMGAIEKMELTKSVVYECLRFEP--PVTAQYGRAKKDLVIES 376
Query: 81 QCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSH--------RNPSGYV 132
+ + AG + + R P++++ ++F P+RF+ + P
Sbjct: 377 HDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETET 436
Query: 133 PFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P ++G + C G + +L + + I RRY
Sbjct: 437 P-TVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 58 VIKETMRLFPAAPVIARSAPYEVQC-----GDYTIPAGASIAIFIY-GLHRHPQLWNNPN 111
V+ ET+RL AA +I R + + +Y + G + +F + PQ+ P
Sbjct: 315 VLWETLRL-TAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPE 373
Query: 112 QFDPDRFLPSQSSHRN-----------PSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160
F DRFL + + + PS VP+ C G +A+ +K + TIL
Sbjct: 374 MFQFDRFLNADRTEKKDFFKNGARVKYPS--VPWGTEDNLCPGRHFAVHAIKELVFTILT 431
Query: 161 RYKILPGDKCKSLQDI---RFEFGMTMRSLPGNDIRIEPR 197
R+ + DK ++ + R+ FG+ P D+ I R
Sbjct: 432 RFDVELCDKNATVPLVDPSRYGFGILQ---PAGDLEIRYR 468
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 58 VIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
V++ET+R P + V+ R A +V GD IPAG ++ I YG + + P D
Sbjct: 278 VVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDAL-IVSYGALGRDERAHGPTA---D 333
Query: 117 RF-LPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
RF L S +R ++ F GP C G+ + ++ + + R+
Sbjct: 334 RFDLTRTSGNR----HISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 50 QRLDLLTRVIKETMRLFPA-APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
++ +L+ ++E +R+ A A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 109 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 50 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 260 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Query: 109 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 320 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 367
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 50 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 109 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 50 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 109 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 50 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 109 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 50 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 109 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
NP + DR NP+ ++ F G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 53 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
+LL +++E +R R+A + + I AG + + + P + P +
Sbjct: 320 NLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
FDP R P+ ++ F G C+G A L+M+ + +L R L
Sbjct: 380 FDPTR--PANR-------HLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSL 423
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 49 LQRLDLLTRVIKETMRLFP--AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 106
L R +L+ ++E R P + R A +V TI AG + +R
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 107 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILP 166
+ + ++ D DR P+ ++ F G C+G+ A ++++ + +L+R LP
Sbjct: 341 FPDADRIDVDR---------TPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR---LP 388
Query: 167 GDKCKSLQ-DIRFEFGMTMRS 186
G + + +R+ GM +R
Sbjct: 389 GIRLGIPETQLRWSEGMLLRG 409
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 72 IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGY 131
+AR A +V+ I AG + + +R P ++ +P++ D D R+P+ +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLD---------RDPNPH 346
Query: 132 VPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
+ + G C G+ A +Q + + T+L R LPG
Sbjct: 347 LAYGNGHHFCTGAVLARMQTELLVDTLLER---LPG 379
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 72 IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGY 131
+AR A +V+ I AG + + +R P ++ +P++ D D R+P+ +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLD---------RDPNPH 346
Query: 132 VPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
+ + G C G+ A +Q + + T+L R LPG
Sbjct: 347 LAYGNGHHFCTGAVLARMQTELLVDTLLER---LPG 379
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 47 DQL----QRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
DQL +R DLL + ++E +R P+ R +V+ + + + +R
Sbjct: 254 DQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANR 313
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQ 150
P+ ++ P+ FD + R+P + F G R C+GS A Q
Sbjct: 314 DPRRYDRPDDFDIE---------RDPVPSMSFGAGMRYCLGSYLARTQ 352
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 57 RVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPD 116
R + E +RL PA + R+A EV+ G++ I G + + + +R P+++ P++ D D
Sbjct: 257 RTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVD 316
Query: 117 R 117
R
Sbjct: 317 R 317
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 23 ESSFRVYHELQDVL--GDSPDSAPTYDQLQRLD---LLTRVIKETMRLFPAAPVIARSAP 77
E+ V EL+ +L + P S T + LD +L V+ E++RL AAP I R
Sbjct: 282 EALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITREVV 340
Query: 78 YEVQC-----GDYTIPAGASIAIF-IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN---- 127
++ ++ + G + +F R P+++ +P F +RFL S +
Sbjct: 341 VDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYK 400
Query: 128 -----PSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159
+ +P+ G C+G YA+ +K + +L
Sbjct: 401 DGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVL 437
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 23 ESSFRVYHELQDVL--GDSPDSAPTYDQLQRLD---LLTRVIKETMRLFPAAPVIARSAP 77
E+ V EL+ +L + P S T + LD +L V+ E++RL AAP I R
Sbjct: 294 EALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITREVV 352
Query: 78 YEVQC-----GDYTIPAGASIAIF-IYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN---- 127
++ ++ + G + +F R P+++ +P F +RFL S +
Sbjct: 353 VDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYK 412
Query: 128 -----PSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159
+ +P+ G C+G YA+ +K + +L
Sbjct: 413 DGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVL 449
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 49 LQRLDLLTRVIKETMRLFP-----AAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 103
L R +L+ ++E R P AAP R A +V TI AG + +R
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAAP---RYAVEDVTLRGVTIRAGEPVLASTGAANRD 337
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYK 163
+ + ++ D DR P+ ++ F G C+G+ A ++++ + +L+R
Sbjct: 338 QAQFPDADRIDVDR---------TPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR-- 386
Query: 164 ILPGDKCKSLQ-DIRFEFGMTMRS 186
LPG + + +R+ GM +R
Sbjct: 387 -LPGIRLGIPETQLRWSEGMLLRG 409
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 49 LQRLDLLTRVIKETMRLFPAAPVIA--RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 106
L R +L+ ++E R P A R A +V TI AG + +R
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 107 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILP 166
+ + ++ D DR P+ ++ F G C+G+ A ++++ + +L+R LP
Sbjct: 341 FPDADRIDVDR---------TPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR---LP 388
Query: 167 GDKCKSLQ-DIRFEFGMTMRS 186
G + + +R+ GM +R
Sbjct: 389 GIRLGIPETQLRWSEGMLLRG 409
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 54 LLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
L+ ++E +R A + R A +++ I AG + + +R ++ +P+
Sbjct: 276 LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA 335
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
D HR+ ++ F G C+G A L+++ ++ ++ R L
Sbjct: 336 LD---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTL 379
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 54 LLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
L+ ++E +R A + R A +++ I AG + + +R ++ +P+
Sbjct: 276 LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA 335
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
D HR+ ++ F G C+G A L+++ ++ ++ R L
Sbjct: 336 LD---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTL 379
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 54 LLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
L+ ++E +R A + R A +++ I AG + + +R ++ +P+
Sbjct: 276 LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA 335
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
D HR+ ++ F G C+G A L+++ ++ ++ R L
Sbjct: 336 LD---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTL 379
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 54 LLTRVIKETMRLFPAAPVIA-RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
L+ ++E +R A + R A +++ I AG + + +R ++ +P+
Sbjct: 276 LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA 335
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
D HR+ ++ F G C+G A L+++ ++ ++ R L
Sbjct: 336 LD---------IHRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTL 379
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 13/124 (10%)
Query: 53 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
+L+ + E +R + A ++ R EV GD T+ G + ++ R +++P+
Sbjct: 262 ELIPNAVDELLRFYGPA-MVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDN 320
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR---YKILPGDK 169
R P+ ++ G C+G+ ++ + I+ L+R + + P +
Sbjct: 321 I---------VIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKE 371
Query: 170 CKSL 173
C+ L
Sbjct: 372 CEWL 375
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 13/124 (10%)
Query: 53 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
+L+ + E +R + A ++ R EV GD T+ G + ++ R +++P+
Sbjct: 262 ELIPNAVDELLRFYGPA-MVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDN 320
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR---YKILPGDK 169
R P+ ++ G C+G+ ++ + I+ L+R + + P +
Sbjct: 321 I---------VIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKE 371
Query: 170 CKSL 173
C+ L
Sbjct: 372 CEWL 375
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 13/124 (10%)
Query: 53 DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
+L+ + E +R + A ++ R EV GD T+ G + ++ R +++P+
Sbjct: 263 ELIPNAVDELLRFYGPA-MVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDN 321
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR---YKILPGDK 169
R P+ ++ G C+G+ ++ + I+ L+R + + P +
Sbjct: 322 I---------VIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKE 372
Query: 170 CKSL 173
C+ L
Sbjct: 373 CEWL 376
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 82 CGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGC 141
CG +I G + + I R +++ P+ FD R+ S + + GP C
Sbjct: 316 CG-ASIKKGEMVFLLIPSALRDGTVFSRPDVFD---------VRRDTSASLAYGRGPHVC 365
Query: 142 IGSKYAMLQMKTTISTILRRY 162
G A L+ + + TI RR+
Sbjct: 366 PGVSLARLEAEIAVGTIFRRF 386
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 50 QRLDLLTRVIKETMRL-FPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWN 108
++ +L+ ++E +R+ A + R A ++Q GD + G + + + G + P+ +
Sbjct: 261 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 109 NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPG 167
NP + DR NP+ ++ G C GS + I +L++ +PG
Sbjct: 321 NPGSIELDR--------PNPTSHLAHGRGQHFCPGSALGRRHAQIGIEALLKK---MPG 368
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 82 CGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGC 141
CG +I G + + I R +++ P+ FD R+ S + + GP C
Sbjct: 316 CG-ASIKKGEMVFLLIPSALRDGTVFSRPDVFD---------VRRDTSASLAYGRGPHVC 365
Query: 142 IGSKYAMLQMKTTISTILRRY 162
G A L+ + + TI RR+
Sbjct: 366 PGVSLARLEAEIAVGTIFRRF 386
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 16/113 (14%)
Query: 57 RVIKETMRLFPA----APVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQ 112
R + E +R P IAR ++ I G S+ + +R P L + ++
Sbjct: 271 RAVDELIRYLTVPYSPTPRIARE---DLTLAGQEIKKGDSVICSLPAANRDPALAPDVDR 327
Query: 113 FDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKIL 165
D R P +V F G C+G+ A L+++T + + RR+ L
Sbjct: 328 LD---------VTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPAL 371
>pdb|1IW7|C Chain C, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1IW7|M Chain M, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1SMY|C Chain C, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1SMY|M Chain M, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1ZYR|C Chain C, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|1ZYR|M Chain M, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|2A68|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A68|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A69|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A69|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A6E|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6E|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6H|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2A6H|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2CW0|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2CW0|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2BE5|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2BE5|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2O5I|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5I|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5J|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2O5J|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2PPB|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|2PPB|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|3DXJ|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3DXJ|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3EQL|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3EQL|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3AOH|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOI|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|4G7H|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7H|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7O|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7O|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7Z|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4G7Z|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4GZY|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
pdb|4GZZ|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
Length = 1119
Score = 30.8 bits (68), Expect = 0.52, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 43 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHIPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
P ++ P+ P R++ S ++ + P G + K
Sbjct: 143 SPGVYFTPDPARPGRYIASIIPLPKRGPWIDLEVEPNGVVSMK 185
>pdb|1V4R|A Chain A, Solution Structure Of Streptmycal Repressor Trar
Length = 102
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 143 GSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSL 187
G YA + T T+++ ++ PGD S+ DIR +FG+ +++
Sbjct: 10 GKGYA--DVATHFRTLIKSGELAPGDTLPSVADIRAQFGVAAKTV 52
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 57 RVIKETMR-LFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDP 115
RV+ E +R L P R A +V I AG + I +R L +P+ D
Sbjct: 280 RVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDA 339
Query: 116 DRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+R S V F G C+G+ A ++ T+ RR+
Sbjct: 340 NRAAVSD---------VGFGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>pdb|3M6Y|A Chain A, Structure Of 4-Hydroxy-2-Oxoglutarate Aldolase From
Bacillus Cereus At 1.45 A Resolution.
pdb|3M6Y|B Chain B, Structure Of 4-Hydroxy-2-Oxoglutarate Aldolase From
Bacillus Cereus At 1.45 A Resolution.
pdb|3M6Y|C Chain C, Structure Of 4-Hydroxy-2-Oxoglutarate Aldolase From
Bacillus Cereus At 1.45 A Resolution.
pdb|3M6Y|D Chain D, Structure Of 4-Hydroxy-2-Oxoglutarate Aldolase From
Bacillus Cereus At 1.45 A Resolution
Length = 275
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 110 PNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158
N + D ++ S S GYV S GP G + A++ +KT I+ +
Sbjct: 129 ANLGEKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVPIKTAIALV 177
>pdb|1L9U|C Chain C, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9U|L Chain L, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9Z|C Chain C, Thermus Aquaticus Rna Polymerase HoloenzymeFORK-Junction
Promoter Dna Complex At 6.5 A Resolution
Length = 1118
Score = 29.3 bits (64), Expect = 1.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 43 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 103 HPQLWNNPNQFDPDRFLPS 121
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1I6V|C Chain C, Thermus Aquaticus Core Rna Polymerase-Rifampicin Complex
Length = 1118
Score = 29.3 bits (64), Expect = 1.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 43 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 103 HPQLWNNPNQFDPDRFLPS 121
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1HQM|C Chain C, Crystal Structure Of Thermus Aquaticus Core Rna
Polymerase- Includes Complete Structure With Side-Chains
(Except For Disordered Regions)-Further Refined From
Original Deposition-Contains Additional Sequence
Information
Length = 1119
Score = 29.3 bits (64), Expect = 1.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 43 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 103 HPQLWNNPNQFDPDRFLPS 121
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|1YNJ|C Chain C, Taq Rna Polymerase-Sorangicin Complex
pdb|1YNN|C Chain C, Taq Rna Polymerase-rifampicin Complex
pdb|2GHO|C Chain C, Recombinant Thermus Aquaticus Rna Polymerase For
Structural Studies
Length = 1119
Score = 29.3 bits (64), Expect = 1.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 43 APTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
AP Y +LQ + T +IKE P++ + + D I + +HR
Sbjct: 92 APLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSFIINGADRVI---------VSQIHR 142
Query: 103 HPQLWNNPNQFDPDRFLPS 121
P ++ P+ P R++ S
Sbjct: 143 SPGVYFTPDPARPGRYIAS 161
>pdb|3N73|A Chain A, Crystal Structure Of A Putative 4-Hydroxy-2-Oxoglutarate
Ald Bacillus Cereus
pdb|3N73|B Chain B, Crystal Structure Of A Putative 4-Hydroxy-2-Oxoglutarate
Ald Bacillus Cereus
Length = 251
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 110 PNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158
N D ++ S S GYV S GP G + A++ +KT I+ +
Sbjct: 105 ANLGGKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVPIKTAIALV 153
>pdb|3MUX|A Chain A, The Crystal Structure Of A Putative
4-Hydroxy-2-Oxoglutarate From Bacillus Anthracis To
1.45a
pdb|3MUX|B Chain B, The Crystal Structure Of A Putative
4-Hydroxy-2-Oxoglutarate From Bacillus Anthracis To
1.45a
Length = 251
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 110 PNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158
N D ++ S S GYV S GP G + A++ +KT I+ +
Sbjct: 105 ANLGGKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVPIKTAIALV 153
>pdb|3DNP|A Chain A, Crystal Structure Of Stress Response Protein Yhax From
Bacillus Subtilis
Length = 290
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 32 LQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI 72
L D+L D P SAP + D+ + + + FPA VI
Sbjct: 147 LSDLLXDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVI 187
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,327,218
Number of Sequences: 62578
Number of extensions: 253318
Number of successful extensions: 839
Number of sequences better than 100.0: 206
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 498
Number of HSP's gapped (non-prelim): 206
length of query: 197
length of database: 14,973,337
effective HSP length: 94
effective length of query: 103
effective length of database: 9,091,005
effective search space: 936373515
effective search space used: 936373515
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)