Query psy16719
Match_columns 197
No_of_seqs 142 out of 1902
Neff 9.3
Searched_HMMs 46136
Date Fri Aug 16 20:14:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16719.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16719hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158|consensus 100.0 5.4E-54 1.2E-58 360.7 18.3 194 1-197 304-498 (499)
2 KOG0157|consensus 100.0 1.8E-50 3.8E-55 345.3 18.9 192 1-197 301-495 (497)
3 PLN02169 fatty acid (omega-1)- 100.0 4.8E-50 1E-54 343.2 18.6 185 1-197 311-499 (500)
4 KOG0159|consensus 100.0 6.6E-50 1.4E-54 331.4 15.5 192 1-197 326-517 (519)
5 KOG0156|consensus 100.0 1.9E-49 4E-54 335.9 17.8 190 1-197 296-487 (489)
6 PLN02971 tryptophan N-hydroxyl 100.0 4.5E-49 9.7E-54 340.3 19.4 193 1-197 337-533 (543)
7 PLN02394 trans-cinnamate 4-mon 100.0 5.1E-49 1.1E-53 337.2 19.6 194 1-197 303-501 (503)
8 PLN02500 cytochrome P450 90B1 100.0 4.7E-49 1E-53 336.5 18.6 190 1-196 289-488 (490)
9 PLN02738 carotene beta-ring hy 100.0 9E-49 1.9E-53 342.2 20.1 191 1-197 401-594 (633)
10 PLN03195 fatty acid omega-hydr 100.0 3.2E-49 7E-54 339.4 16.9 193 1-197 302-515 (516)
11 PLN02426 cytochrome P450, fami 100.0 8.2E-49 1.8E-53 335.7 19.2 194 1-197 303-499 (502)
12 PTZ00404 cytochrome P450; Prov 100.0 6.3E-49 1.4E-53 335.1 17.8 188 1-197 293-482 (482)
13 PLN02183 ferulate 5-hydroxylas 100.0 8.6E-49 1.9E-53 336.8 18.5 194 1-197 314-511 (516)
14 PLN00168 Cytochrome P450; Prov 100.0 1.5E-48 3.2E-53 335.5 19.4 194 1-197 316-516 (519)
15 PLN03234 cytochrome P450 83B1; 100.0 1.3E-48 2.8E-53 334.4 18.3 195 1-197 298-498 (499)
16 PLN02290 cytokinin trans-hydro 100.0 1.2E-48 2.5E-53 335.9 17.9 188 1-197 326-514 (516)
17 PLN02655 ent-kaurene oxidase 100.0 5.4E-48 1.2E-52 328.2 18.9 191 1-197 272-463 (466)
18 PLN00110 flavonoid 3',5'-hydro 100.0 5.4E-48 1.2E-52 331.0 18.3 193 1-197 299-496 (504)
19 PF00067 p450: Cytochrome P450 100.0 1.8E-48 3.9E-53 326.1 14.7 190 1-194 272-463 (463)
20 PLN02774 brassinosteroid-6-oxi 100.0 9.9E-48 2.1E-52 326.3 18.2 188 1-196 274-462 (463)
21 PLN02966 cytochrome P450 83A1 100.0 1.6E-47 3.5E-52 327.9 19.0 169 1-169 299-470 (502)
22 PLN02687 flavonoid 3'-monooxyg 100.0 5.5E-47 1.2E-51 325.7 19.2 194 1-197 307-508 (517)
23 PLN03112 cytochrome P450 famil 100.0 7.8E-47 1.7E-51 324.5 18.7 194 1-197 306-507 (514)
24 PLN03141 3-epi-6-deoxocathaste 100.0 8.8E-47 1.9E-51 319.6 18.6 187 1-197 261-449 (452)
25 PLN03018 homomethionine N-hydr 100.0 1.4E-46 3E-51 323.9 19.4 193 1-197 324-523 (534)
26 PLN02196 abscisic acid 8'-hydr 100.0 1.3E-46 2.9E-51 319.4 17.6 188 1-197 274-462 (463)
27 PLN02936 epsilon-ring hydroxyl 100.0 3E-46 6.5E-51 319.2 18.7 190 1-197 288-481 (489)
28 PLN02302 ent-kaurenoic acid ox 100.0 4.3E-46 9.3E-51 318.0 18.0 188 1-197 297-487 (490)
29 PLN02987 Cytochrome P450, fami 100.0 8.6E-46 1.9E-50 314.9 19.4 190 1-197 277-468 (472)
30 KOG0684|consensus 100.0 3.2E-44 6.9E-49 292.1 14.8 193 1-197 283-484 (486)
31 PLN02648 allene oxide synthase 100.0 2.9E-39 6.2E-44 274.7 17.2 165 2-169 283-462 (480)
32 COG2124 CypX Cytochrome P450 [ 100.0 2E-38 4.3E-43 265.6 13.0 164 1-196 246-409 (411)
33 PF09201 SRX: SRX; InterPro: 68.1 4.4 9.5E-05 28.8 2.1 23 139-161 18-40 (148)
34 PF12508 DUF3714: Protein of u 64.4 2.6 5.5E-05 32.1 0.4 43 52-95 52-94 (200)
35 PF08492 SRP72: SRP72 RNA-bind 62.3 6.1 0.00013 23.8 1.6 9 113-121 43-51 (59)
36 PF14129 DUF4296: Domain of un 47.7 39 0.00085 21.8 3.8 34 4-37 46-79 (87)
37 PF05952 ComX: Bacillus compet 46.7 18 0.00038 21.6 1.9 17 14-30 5-21 (57)
38 PF08285 DPM3: Dolichol-phosph 38.1 44 0.00095 22.0 2.9 29 8-36 53-81 (91)
39 PF15300 INT_SG_DDX_CT_C: INTS 37.6 47 0.001 20.4 2.8 14 53-66 41-54 (65)
40 KOG3506|consensus 36.2 17 0.00036 21.4 0.6 11 132-142 12-22 (56)
41 TIGR03779 Bac_Flav_CT_M Bacter 35.3 14 0.00031 31.3 0.3 20 76-95 278-297 (410)
42 PRK06789 flagellar motor switc 31.3 70 0.0015 20.2 2.9 39 58-96 21-62 (74)
43 PF11227 DUF3025: Protein of u 30.6 30 0.00065 26.6 1.3 23 95-117 188-211 (212)
44 PF12554 MOZART1: Mitotic-spin 28.1 75 0.0016 18.2 2.4 30 3-32 18-47 (48)
45 COG2101 SPT15 TATA-box binding 27.4 18 0.0004 26.8 -0.2 35 111-145 35-70 (185)
46 PF12444 Sox_N: Sox developmen 26.7 46 0.00099 21.6 1.5 21 149-169 60-80 (84)
47 cd00642 GTP_cyclohydro1 GTP cy 23.0 1.2E+02 0.0025 22.9 3.3 27 11-37 103-129 (185)
48 PRK11901 hypothetical protein; 22.2 2.1E+02 0.0045 23.6 4.8 36 111-146 2-37 (327)
49 PLN03044 GTP cyclohydrolase I; 21.6 1.5E+02 0.0031 22.5 3.6 28 10-37 103-130 (188)
50 TIGR00063 folE GTP cyclohydrol 20.9 1.4E+02 0.003 22.4 3.3 27 11-37 98-124 (180)
51 COG0302 FolE GTP cyclohydrolas 20.6 1.4E+02 0.0031 22.6 3.3 27 11-37 112-138 (195)
52 PF09551 Spore_II_R: Stage II 20.6 1.8E+02 0.004 20.5 3.7 71 22-92 19-98 (130)
No 1
>KOG0158|consensus
Probab=100.00 E-value=5.4e-54 Score=360.69 Aligned_cols=194 Identities=29% Similarity=0.596 Sum_probs=177.3
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||.||||++|++++|+|++||++|+|+++||+++..+..+ + +++.+.+|+||++||+||||+||+++.+.|.+.+|+
T Consensus 304 ~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~-l-tyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~ 381 (499)
T KOG0158|consen 304 LAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEG-L-TYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDY 381 (499)
T ss_pred HhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCC-C-CHHHHhCCcHHHHHHHHHHhhCCCcccccceecCce
Confidence 59999999999999999999999999999999999765433 6 999999999999999999999999999999999999
Q ss_pred ecC-CEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHHh
Q psy16719 81 QCG-DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159 (197)
Q Consensus 81 ~~~-g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll 159 (197)
++. ++.|++|+.|.++++++||||++|+||++|+||||.+++.+...+..|+|||.|||+|+|.+||++|+|+.++.||
T Consensus 382 ~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL 461 (499)
T KOG0158|consen 382 EIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLL 461 (499)
T ss_pred ecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999998887677889999999999999999999999999999999
Q ss_pred hhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 160 RRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 160 ~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
++|+++..+.. .+.......+.++.|++++++++++|
T Consensus 462 ~~f~~~~~~~t-~~~~~~~~~~~~l~pk~gi~Lkl~~r 498 (499)
T KOG0158|consen 462 RNFSFEVCPTT-IIPLEGDPKGFTLSPKGGIWLKLEPR 498 (499)
T ss_pred hhCEEecCCcc-cCcccCCccceeeecCCceEEEEEeC
Confidence 99999999841 12211112278899999999999987
No 2
>KOG0157|consensus
Probab=100.00 E-value=1.8e-50 Score=345.27 Aligned_cols=192 Identities=36% Similarity=0.717 Sum_probs=173.3
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||+|||+++++|+++.|+.||++|+|+++|+++++++..... +....++|+|+++||+|+|||||++|.+.|.+.+|+
T Consensus 301 faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~-~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~ 379 (497)
T KOG0157|consen 301 FAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKW-EVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDV 379 (497)
T ss_pred eeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCC-ChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCe
Confidence 6999999999999999999999999999999999998543333 333344799999999999999999999999999999
Q ss_pred ec-CCEEeCCCCEEEecchhhhcCCCCCC-CCCCCCCCCCCCCCCC-CCCCCCCcccCCCCcCCccHHHHHHHHHHHHHH
Q psy16719 81 QC-GDYTIPAGASIAIFIYGLHRHPQLWN-NPNQFDPDRFLPSQSS-HRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 157 (197)
Q Consensus 81 ~~-~g~~ip~g~~v~~~~~~~~~~~~~~~-~p~~F~p~R~l~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ 157 (197)
++ +|+.||+|+.|+++++.+|||+++|+ ||++|+||||+++... ..++++|+|||+|+|+|+|++||++|++++++.
T Consensus 380 ~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ 459 (497)
T KOG0157|consen 380 KLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAH 459 (497)
T ss_pred EcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHH
Confidence 99 58999999999999999999999996 9999999999975443 456799999999999999999999999999999
Q ss_pred HhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 158 ILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 158 ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
|+++|+|++..+. . ......++++|+.+++|++++|
T Consensus 460 ll~~f~~~~~~~~---~-~~~~~~~~l~~~~gl~v~~~~r 495 (497)
T KOG0157|consen 460 LLRRFRIEPVGGD---K-PKPVPELTLRPKNGLKVKLRPR 495 (497)
T ss_pred HHHheEEEecCCC---C-ceeeeEEEEEecCCeEEEEEeC
Confidence 9999999999872 2 5566789999999999999987
No 3
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=4.8e-50 Score=343.25 Aligned_cols=185 Identities=22% Similarity=0.395 Sum_probs=166.1
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||+|||+++++|++++|+.||++|+|+++||++++ +++++++|||++||++|+||++|++|...|.+.+|.
T Consensus 311 ~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~--------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~ 382 (500)
T PLN02169 311 LAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF--------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPD 382 (500)
T ss_pred HhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC--------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCC
Confidence 589999999999999999999999999999999763 678999999999999999999999999888777665
Q ss_pred e-cCCEEeCCCCEEEecchhhhcCCCCC-CCCCCCCCCCCCCCCCCC--CCCCCCcccCCCCcCCccHHHHHHHHHHHHH
Q psy16719 81 Q-CGDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSH--RNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 156 (197)
Q Consensus 81 ~-~~g~~ip~g~~v~~~~~~~~~~~~~~-~~p~~F~p~R~l~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 156 (197)
+ ++|+.||+|+.|.+++|++||||++| +||++|+||||+++++.. ..++.|+|||+|+|+|+|++||++|++++++
T Consensus 383 ~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la 462 (500)
T PLN02169 383 VLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVAL 462 (500)
T ss_pred CccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 5 49999999999999999999999999 899999999999765433 2367899999999999999999999999999
Q ss_pred HHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 157 TILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 157 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
.|+++|+|+..++. ++.....++++|++++++++++|
T Consensus 463 ~ll~~f~~~~~~~~----~~~~~~~~~l~~~~gl~l~l~~~ 499 (500)
T PLN02169 463 EIIKNYDFKVIEGH----KIEAIPSILLRMKHGLKVTVTKK 499 (500)
T ss_pred HHHHHCEEEEcCCC----CcccccceEEecCCCEEEEEEeC
Confidence 99999999998652 33334568889999999999987
No 4
>KOG0159|consensus
Probab=100.00 E-value=6.6e-50 Score=331.39 Aligned_cols=192 Identities=26% Similarity=0.499 Sum_probs=180.6
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||.|||+.++.|+||+|++||++|+++++|+.+++....... +.+.+.++|||.|||+|++||||.+++..|...+|.
T Consensus 326 ~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~-~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~ 404 (519)
T KOG0159|consen 326 AAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSEL-TQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDL 404 (519)
T ss_pred HHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCccccc-chHHHhhCHHHHHHHHhhhceeccccccccccchhc
Confidence 5899999999999999999999999999999999998753444 899999999999999999999999999999999999
Q ss_pred ecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHHhh
Q psy16719 81 QCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160 (197)
Q Consensus 81 ~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~ 160 (197)
.+.||.||+||.|.++.+.+.+||++|++|++|+|||||+++.+..+++.++|||.|+|+|+|++||++|+.+.+|.|++
T Consensus 405 vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr 484 (519)
T KOG0159|consen 405 VLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLR 484 (519)
T ss_pred eeccceecCCCeEEEeehhhccChhhCCCccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998866678999999999999999999999999999999999
Q ss_pred hCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 161 RYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 161 ~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+|+++..++ .+++....+++.|..++.++|++|
T Consensus 485 ~f~V~~~~~----~pv~~~~~~il~P~~~l~f~f~~r 517 (519)
T KOG0159|consen 485 NFKVEFLHE----EPVEYVYRFILVPNRPLRFKFRPR 517 (519)
T ss_pred hcceeecCC----CCccceeEEEEcCCCCcceeeeeC
Confidence 999999985 467777789999999999999876
No 5
>KOG0156|consensus
Probab=100.00 E-value=1.9e-49 Score=335.87 Aligned_cols=190 Identities=26% Similarity=0.505 Sum_probs=168.7
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCcc-ceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~ 79 (197)
+||+|||++++.|++.+|++||++|+|+++||++++|.+ +.++.+|+.+||||+|+|+|++|++|++|. ++|.+.+|
T Consensus 296 ~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~--r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d 373 (489)
T KOG0156|consen 296 LAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG--RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTED 373 (489)
T ss_pred hcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC--CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCC
Confidence 599999999999999999999999999999999999863 324999999999999999999999999997 69999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQ-SSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~l 158 (197)
+.++||.||+||.|++++|++||||++|+||++|+||||++++ ... ....++|||.|+|.|+|..+|.+++.++++.|
T Consensus 374 ~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~l 452 (489)
T KOG0156|consen 374 TKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSNDGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANL 452 (489)
T ss_pred eeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCccccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999984 444 77899999999999999999999999999999
Q ss_pred hhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 159 LRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 159 l~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+++|||+..++ ..+.... +++...+.++.+...+|
T Consensus 453 lq~F~w~~~~~---~~d~~e~-~~~~~~~~pl~~~~~~r 487 (489)
T KOG0156|consen 453 LQRFDWKLPGG---KVDMEEA-GLTLKKKKPLKAVPVPR 487 (489)
T ss_pred HheeeeecCCC---CCCCccc-ccceecCCcceeeeecC
Confidence 99999999976 2233333 25555555666555443
No 6
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=4.5e-49 Score=340.31 Aligned_cols=193 Identities=22% Similarity=0.373 Sum_probs=168.4
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCcc-ceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~ 79 (197)
+||+|||+++++|++++|+.||++|+|+++||+++++. +..++++++++|||++|||+|+||++|+++. ++|.+.+|
T Consensus 337 ~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~--~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d 414 (543)
T PLN02971 337 MAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK--ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSD 414 (543)
T ss_pred eeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCC
Confidence 58999999999999999999999999999999999975 3345999999999999999999999999997 78999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCcccCCCCcCCccHHHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS---HRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 156 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 156 (197)
++++||.||||+.|+++.|++||||++|+||++|+||||++++.+ ...+..|+|||.|+|+|+|++||++|++++++
T Consensus 415 ~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la 494 (543)
T PLN02971 415 TTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLA 494 (543)
T ss_pred eeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975432 13456899999999999999999999999999
Q ss_pred HHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 157 TILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 157 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
.|+++|+|+..+++. ..+..-..+ ++..++++.+.+++|
T Consensus 495 ~ll~~f~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 533 (543)
T PLN02971 495 RLLQGFKWKLAGSET-RVELMESSH-DMFLSKPLVMVGELR 533 (543)
T ss_pred HHHHhCEEEeCCCCC-CcchhhhcC-cccccccceeeeeec
Confidence 999999999886521 223322334 553344888888877
No 7
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=5.1e-49 Score=337.20 Aligned_cols=194 Identities=24% Similarity=0.468 Sum_probs=168.3
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccc-eeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~-~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+|+++||+++++.. ..+ +++++++|||++|||+|+||++|+++.. .|.+.+|
T Consensus 303 ~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~-~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d 380 (503)
T PLN02394 303 VAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG-NQV-TEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLED 380 (503)
T ss_pred HhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC-CCC-CHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCC
Confidence 599999999999999999999999999999999999752 334 8999999999999999999999999985 7888999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCcccCCCCcCCccHHHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS---HRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 156 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 156 (197)
++++|+.||+||.|.++.|.+||||++|+||++|+||||+++++. ......|+|||.|+|+|+|++||++|+++++|
T Consensus 381 ~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la 460 (503)
T PLN02394 381 AKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLG 460 (503)
T ss_pred cccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975432 22456899999999999999999999999999
Q ss_pred HHhhhCeEeeCCCCCCcccceeec-ceeEeeCCCceeEEEeC
Q psy16719 157 TILRRYKILPGDKCKSLQDIRFEF-GMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 157 ~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~v~~~~R 197 (197)
.|+++|++++.++.. ..+..... +++...+.++.+++.+|
T Consensus 461 ~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r 501 (503)
T PLN02394 461 RLVQNFELLPPPGQS-KIDVSEKGGQFSLHIAKHSTVVFKPR 501 (503)
T ss_pred HHHHHceeEeCCCCC-cCccccccCceeeccCCCceEEeecC
Confidence 999999999877631 12222223 24553444999999987
No 8
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=4.7e-49 Score=336.50 Aligned_cols=190 Identities=22% Similarity=0.339 Sum_probs=165.4
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCC---CCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecC
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGD---SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAP 77 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~---~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~ 77 (197)
+||+|||+++++|++++|++||++|+|+++||+++++. .+...++++++++|||++|||+|+||++|+++.+.|.+.
T Consensus 289 ~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~ 368 (490)
T PLN02500 289 FAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKAL 368 (490)
T ss_pred HhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeC
Confidence 58999999999999999999999999999999998742 112234999999999999999999999999999899999
Q ss_pred ceeecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCcccCCCCcCCccHHHHHHH
Q psy16719 78 YEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSH-------RNPSGYVPFSLGPRGCIGSKYAMLQ 150 (197)
Q Consensus 78 ~~~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~-------~~~~~~~~Fg~G~r~C~G~~~A~~e 150 (197)
+|++++||.||||+.|+++.|++||||++|+||++|+||||++++... ..++.|+|||+|+|+|+|++||++|
T Consensus 369 ~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~e 448 (490)
T PLN02500 369 KDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLE 448 (490)
T ss_pred CCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHH
Confidence 999999999999999999999999999999999999999999754321 2457899999999999999999999
Q ss_pred HHHHHHHHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEe
Q psy16719 151 MKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEP 196 (197)
Q Consensus 151 ~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~ 196 (197)
++++++.|+++|+|+..++. .... .. ...+.++++|++++
T Consensus 449 l~~~la~ll~~f~~~~~~~~---~~~~--~~-~~~~~~~l~~~~~~ 488 (490)
T PLN02500 449 MAVFIHHLVLNFNWELAEAD---QAFA--FP-FVDFPKGLPIRVRR 488 (490)
T ss_pred HHHHHHHHHhccEEEEcCCC---ccee--cc-cccCCCCceEEEEe
Confidence 99999999999999998762 2222 12 23445699999875
No 9
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=9e-49 Score=342.22 Aligned_cols=191 Identities=26% Similarity=0.528 Sum_probs=171.8
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||+|||+.+++|++++|++||++|+|+++||++++++ ..++++++++||||+|||+|+|||+|+++.+.|.+.+|+
T Consensus 401 ~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~---~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~ 477 (633)
T PLN02738 401 IAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD---RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEND 477 (633)
T ss_pred hcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC---CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCc
Confidence 59999999999999999999999999999999999873 344999999999999999999999999999889999999
Q ss_pred ecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHH
Q psy16719 81 QCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQS---SHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 157 (197)
Q Consensus 81 ~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ 157 (197)
+++|+.||+||.|.++.|.+||||++|+||++|+||||++.+. .......|+|||.|+|+|+|++||++|+++++|.
T Consensus 478 ~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~ 557 (633)
T PLN02738 478 MLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAM 557 (633)
T ss_pred eECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999985321 1234568999999999999999999999999999
Q ss_pred HhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 158 ILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 158 ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
|+++|+|++.++. .++......+..|++++++++++|
T Consensus 558 Llr~F~~el~~~~---~~~~~~~~~~~~p~~~l~v~l~~R 594 (633)
T PLN02738 558 LVRRFDFQLAPGA---PPVKMTTGATIHTTEGLKMTVTRR 594 (633)
T ss_pred HHHhCeeEeCCCC---CCcccccceEEeeCCCcEEEEEEC
Confidence 9999999998762 334444467888889999999987
No 10
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=3.2e-49 Score=339.42 Aligned_cols=193 Identities=23% Similarity=0.390 Sum_probs=167.7
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCC------------------CCCCCCHHhhccChHHHHHHHHH
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDS------------------PDSAPTYDQLQRLDLLTRVIKET 62 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~------------------~~~~~~~~~~~~l~~l~a~i~E~ 62 (197)
+||+|||+++++|++++|+.||++|+|+++||++++++. .+..++++++++|||++|||+|+
T Consensus 302 ~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~Et 381 (516)
T PLN03195 302 IAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITET 381 (516)
T ss_pred HHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHH
Confidence 489999999999999999999999999999999987531 01234899999999999999999
Q ss_pred hcCCCCCccceeecCceeec-CCEEeCCCCEEEecchhhhcCCCCC-CCCCCCCCCCCCCCCC-CCCCCCCCcccCCCCc
Q psy16719 63 MRLFPAAPVIARSAPYEVQC-GDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQS-SHRNPSGYVPFSLGPR 139 (197)
Q Consensus 63 lRl~~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~~~~~~-~~p~~F~p~R~l~~~~-~~~~~~~~~~Fg~G~r 139 (197)
||++|+++...|.+.+|..+ +|+.||+|+.|.++.|++||||++| +||++|+||||++++. ....++.|+|||+|+|
T Consensus 382 LRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R 461 (516)
T PLN03195 382 LRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPR 461 (516)
T ss_pred hhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCC
Confidence 99999999987777776555 9999999999999999999999999 9999999999996432 2234567999999999
Q ss_pred CCccHHHHHHHHHHHHHHHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 140 GCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 140 ~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+|+|++||++|++++++.|+++|++++.++. +.......+..|+++++|++++|
T Consensus 462 ~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~r 515 (516)
T PLN03195 462 ICLGKDSAYLQMKMALALLCRFFKFQLVPGH----PVKYRMMTILSMANGLKVTVSRR 515 (516)
T ss_pred cCcCHHHHHHHHHHHHHHHHHhceeEecCCC----cceeeeeeEEecCCCEEEEEEeC
Confidence 9999999999999999999999999987641 23333446778999999999987
No 11
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=8.2e-49 Score=335.70 Aligned_cols=194 Identities=23% Similarity=0.397 Sum_probs=171.6
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||+|||+++++|+++.|++||++|+|+++||+++++.....+ +++++++|||++|||+|+||++|+++...|.+.+|.
T Consensus 303 ~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~-t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~ 381 (502)
T PLN02426 303 LAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAA-SFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDD 381 (502)
T ss_pred HhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCC-CHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCC
Confidence 5899999999999999999999999999999999987533334 999999999999999999999999998889999887
Q ss_pred ec-CCEEeCCCCEEEecchhhhcCCCCC-CCCCCCCCCCCCCCCCC-CCCCCCCcccCCCCcCCccHHHHHHHHHHHHHH
Q psy16719 81 QC-GDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSS-HRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 157 (197)
Q Consensus 81 ~~-~g~~ip~g~~v~~~~~~~~~~~~~~-~~p~~F~p~R~l~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ 157 (197)
.+ +|+.||+|+.|.++.+++||||++| +||++|+||||++++.. ...++.|+|||+|+|.|+|++||++|++++++.
T Consensus 382 ~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ 461 (502)
T PLN02426 382 VLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVA 461 (502)
T ss_pred CcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 77 9999999999999999999999999 99999999999974321 234568999999999999999999999999999
Q ss_pred HhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 158 ILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 158 ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
|+++|+++..++. ...+....+++++|+++++|++++|
T Consensus 462 ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~gl~v~~~~r 499 (502)
T PLN02426 462 VVRRFDIEVVGRS--NRAPRFAPGLTATVRGGLPVRVRER 499 (502)
T ss_pred HHHHceEEEecCC--CCCCcccceeEEecCCCEEEEEEEc
Confidence 9999999997541 1223444568899999999999987
No 12
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=6.3e-49 Score=335.05 Aligned_cols=188 Identities=28% Similarity=0.490 Sum_probs=168.0
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCcc-ceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+|+++||++++++. ... +++++++|||++||++|+||++|+++. ++|.+.+|
T Consensus 293 ~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~-~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d 370 (482)
T PTZ00404 293 LAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR-NKV-LLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSND 370 (482)
T ss_pred HhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC-CCC-CccccccChHHHHHHHHHHHhcCCcccccceeccCC
Confidence 599999999999999999999999999999999999753 334 999999999999999999999999997 69999999
Q ss_pred eec-CCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHH
Q psy16719 80 VQC-GDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158 (197)
Q Consensus 80 ~~~-~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~l 158 (197)
+++ +|+.||+|+.|.++.+++||||++|+||++|+||||++.. ....|+|||+|+|+|+|++||++|++++++.|
T Consensus 371 ~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~l 446 (482)
T PTZ00404 371 IIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNI 446 (482)
T ss_pred EEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC----CCCceeccCCCCCCCccHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999998642 45689999999999999999999999999999
Q ss_pred hhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 159 LRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 159 l~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+++|+++..+++ +.+.....++++.|. ++++++++|
T Consensus 447 l~~f~~~~~~~~--~~~~~~~~~~~~~~~-~~~v~~~~R 482 (482)
T PTZ00404 447 ILNFKLKSIDGK--KIDETEEYGLTLKPN-KFKVLLEKR 482 (482)
T ss_pred HHhcEEecCCCC--CCCcccccceeecCC-CceeeeecC
Confidence 999999987652 112222345666754 899999987
No 13
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=8.6e-49 Score=336.82 Aligned_cols=194 Identities=23% Similarity=0.413 Sum_probs=166.7
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||+|||+++++|+++.|++||++|+|+++||+++++.. ..+ +++++++|+|++|||+|+||++|++|...|.+.+|+
T Consensus 314 ~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~-~~~-~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~ 391 (516)
T PLN02183 314 FGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLN-RRV-EESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDA 391 (516)
T ss_pred HcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-CCC-CHHHhccChHHHHHHHHHhccCCCccceeeeccCce
Confidence 599999999999999999999999999999999999742 334 999999999999999999999999999889999999
Q ss_pred ecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCcccCCCCcCCccHHHHHHHHHHHHHHH
Q psy16719 81 QCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSH--RNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158 (197)
Q Consensus 81 ~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~l 158 (197)
+++|+.||||+.|.++.|++||||++|+||++|+||||++++... ...+.|+|||+|+|+|+|++||++|+++++|.|
T Consensus 392 ~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~l 471 (516)
T PLN02183 392 EVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHL 471 (516)
T ss_pred eECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999755422 245689999999999999999999999999999
Q ss_pred hhhCeEeeCCCCCCcccce--eecceeEeeCCCceeEEEeC
Q psy16719 159 LRRYKILPGDKCKSLQDIR--FEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 159 l~~f~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~R 197 (197)
+++|+++..++... .... ...+.+..+..++.+.+++|
T Consensus 472 l~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r 511 (516)
T PLN02183 472 LHCFTWELPDGMKP-SELDMNDVFGLTAPRATRLVAVPTYR 511 (516)
T ss_pred HheeEEEcCCCCCC-CCCChhhccccccccCCCcEEEeecC
Confidence 99999998775321 1122 12234433344667777665
No 14
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=1.5e-48 Score=335.53 Aligned_cols=194 Identities=21% Similarity=0.378 Sum_probs=170.2
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCcc-ceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~ 79 (197)
+||+|||+.+++|++++|++||++|+|+++||++++++....+ +++++++|||++||++|+||++|+++. +.|.+.+|
T Consensus 316 ~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~-~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d 394 (519)
T PLN00168 316 NAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEV-SEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAED 394 (519)
T ss_pred HhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC-CHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCC
Confidence 5899999999999999999999999999999999997533445 999999999999999999999999987 58999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCcccCCCCcCCccHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS------HRNPSGYVPFSLGPRGCIGSKYAMLQMKT 153 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~------~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~ 153 (197)
++++|+.||+|+.|.++.+++||||++|+||++|+||||++++.. ....+.|+|||.|+|+|+|++||++|+++
T Consensus 395 ~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~ 474 (519)
T PLN00168 395 MEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEY 474 (519)
T ss_pred ccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999974321 12346899999999999999999999999
Q ss_pred HHHHHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 154 TISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 154 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+++.|+++|+|++.++. ..+......++..+++++.+++++|
T Consensus 475 ~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~R 516 (519)
T PLN00168 475 FVANMVREFEWKEVPGD--EVDFAEKREFTTVMAKPLRARLVPR 516 (519)
T ss_pred HHHHHHHHccceeCCCC--cCChhhhceeEEeecCCcEEEEEec
Confidence 99999999999997652 1222222346777777999999887
No 15
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.3e-48 Score=334.44 Aligned_cols=195 Identities=22% Similarity=0.381 Sum_probs=171.1
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccc-eeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~-~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+|+++||++++++. .. ++++++++|||++|||+|+||++|+++.. .|.+.+|
T Consensus 298 ~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~-~~-~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d 375 (499)
T PLN03234 298 VPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK-GY-VSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIAD 375 (499)
T ss_pred hcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CC-CCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCC
Confidence 599999999999999999999999999999999998752 33 49999999999999999999999999984 7999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCC-CCCCCCCCCCCCCCCCC---CCCCCCCcccCCCCcCCccHHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSS---HRNPSGYVPFSLGPRGCIGSKYAMLQMKTTI 155 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~-~~p~~F~p~R~l~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 155 (197)
++++|+.||+||.|.++.+.+||||++| +||++|+||||+++.+. ......|+|||.|+|+|+|+++|++|+++++
T Consensus 376 ~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~l 455 (499)
T PLN03234 376 AKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPF 455 (499)
T ss_pred eeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999 89999999999976433 2245689999999999999999999999999
Q ss_pred HHHhhhCeEeeCCCCC-CcccceeecceeEeeCCCceeEEEeC
Q psy16719 156 STILRRYKILPGDKCK-SLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 156 ~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
|.|+++|+|++.++.. .....+...+++..|++.+.+.+++|
T Consensus 456 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 456 ANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred HHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 9999999999987531 11133445577778888888877765
No 16
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=1.2e-48 Score=335.94 Aligned_cols=188 Identities=27% Similarity=0.512 Sum_probs=169.6
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||+|||+++++|++++|++||++|+|+++||+++++. +.+ +++++++|||++|||+|+||++|+++.+.|.+.+|+
T Consensus 326 ~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~--~~~-~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~ 402 (516)
T PLN02290 326 FAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGG--ETP-SVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDI 402 (516)
T ss_pred hhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC--CCC-CHHHHhcChHHHHHHHHHHHcCCCccccceeecCCe
Confidence 59999999999999999999999999999999999974 344 999999999999999999999999998899999999
Q ss_pred ecCCEEeCCCCEEEecchhhhcCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHHh
Q psy16719 81 QCGDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159 (197)
Q Consensus 81 ~~~g~~ip~g~~v~~~~~~~~~~~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll 159 (197)
+++|+.||+|+.|+++.|++||||++| +||++|+||||++.+. .....|+|||.|+|.|+|++||++|++++++.|+
T Consensus 403 ~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~--~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll 480 (516)
T PLN02290 403 KLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF--APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLI 480 (516)
T ss_pred eECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC--CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 8999999999995421 2345799999999999999999999999999999
Q ss_pred hhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 160 RRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 160 ~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
++|++++.++. +......++.+|++++++++++|
T Consensus 481 ~~f~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~~~ 514 (516)
T PLN02290 481 SKFSFTISDNY----RHAPVVVLTIKPKYGVQVCLKPL 514 (516)
T ss_pred HhceEeeCCCc----ccCccceeeecCCCCCeEEEEeC
Confidence 99999987651 11112357889999999999987
No 17
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=5.4e-48 Score=328.17 Aligned_cols=191 Identities=27% Similarity=0.473 Sum_probs=172.1
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccc-eeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~-~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+|+++||++++++ ..+ ++++++++||++||++|+||++|+++.. +|.+.+|
T Consensus 272 ~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~--~~~-~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d 348 (466)
T PLN02655 272 IEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD--ERV-TEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHED 348 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC--CCC-CHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCC
Confidence 58999999999999999999999999999999999985 335 9999999999999999999999999985 7999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHHh
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll 159 (197)
++++|+.||+|+.|+++.+++||||++|+||++|+||||++.+........++|||+|+|.|+|++||.+|++++++.||
T Consensus 349 ~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll 428 (466)
T PLN02655 349 TTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLV 428 (466)
T ss_pred cccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997654333457899999999999999999999999999999
Q ss_pred hhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 160 RRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 160 ~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
++|++++.++. .+.....+++..+++++.+++++|
T Consensus 429 ~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r 463 (466)
T PLN02655 429 QEFEWRLREGD---EEKEDTVQLTTQKLHPLHAHLKPR 463 (466)
T ss_pred HHeEEEeCCCC---ccccchhheeEeecCCcEEEEeec
Confidence 99999997662 222224577888989999999876
No 18
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=5.4e-48 Score=330.95 Aligned_cols=193 Identities=23% Similarity=0.467 Sum_probs=171.0
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCcc-ceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~ 79 (197)
+||+|||+++++|++++|+.||++|+|+++|++++++.. ..+ +++++++|||++|||+|+||++|+++. +.|.+.+|
T Consensus 299 ~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~-~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d 376 (504)
T PLN00110 299 TAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRN-RRL-VESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQA 376 (504)
T ss_pred cccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCC-CHHHhhcChHHHHHHHHHhcCCCCcccccccccCCC
Confidence 589999999999999999999999999999999999752 334 999999999999999999999999997 78999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCcccCCCCcCCccHHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHR----NPSGYVPFSLGPRGCIGSKYAMLQMKTTI 155 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~----~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 155 (197)
+.++|+.||+|+.|.++.+++|+||++|+||++|+||||++++.... ....++|||+|+|.|+|++||++|+++++
T Consensus 377 ~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~l 456 (504)
T PLN00110 377 CEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYIL 456 (504)
T ss_pred eeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999996543221 23579999999999999999999999999
Q ss_pred HHHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 156 STILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 156 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+.|+++|+|++.++. +.+.....++++.|+.++.+++++|
T Consensus 457 a~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r 496 (504)
T PLN00110 457 GTLVHSFDWKLPDGV--ELNMDEAFGLALQKAVPLSAMVTPR 496 (504)
T ss_pred HHHHHhceeecCCCC--ccCcccccccccccCCCceEeeccC
Confidence 999999999997762 1222223567888888999999887
No 19
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.8e-48 Score=326.08 Aligned_cols=190 Identities=31% Similarity=0.560 Sum_probs=163.7
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCc-cceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAP-VIARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~-~~~r~~~~~ 79 (197)
+||+|||+.+++|++++|++||++|+++++||++++++ +... +.+++++||||+|||+|+||++|+++ .+.|.+.+|
T Consensus 272 ~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~-~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d 349 (463)
T PF00067_consen 272 FAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD-GREI-TFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATED 349 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT-SSSH-HHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSS
T ss_pred cccccccccccccccccccccccccccccccccccccc-cccc-cccccccccccccccccccccccccccccccccccc
Confidence 48999999999999999999999999999999999954 2344 89999999999999999999999999 689999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQS-SHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~l 158 (197)
++++|+.||+|+.|.++.+.+|+||++|+||++|+|+||++.+. .......|+|||.|+|.|+|++||++|++++++.|
T Consensus 350 ~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~l 429 (463)
T PF00067_consen 350 VTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKL 429 (463)
T ss_dssp EEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876 34567899999999999999999999999999999
Q ss_pred hhhCeEeeCCCCCCcccceeecceeEeeCCCceeEE
Q psy16719 159 LRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRI 194 (197)
Q Consensus 159 l~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~ 194 (197)
+++||+++.++.. .........+..|+.++.|.|
T Consensus 430 l~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 463 (463)
T PF00067_consen 430 LRRFDFELVPGSE--PEPQEQQNGFLLPPKPLKVKF 463 (463)
T ss_dssp HHHEEEEESTTSS--GGEEECSCSSSEEESSSEEEE
T ss_pred HHhCEEEECCCCC--CCCccccCceEeeCCCcEEeC
Confidence 9999999977521 222222223444444887765
No 20
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=9.9e-48 Score=326.33 Aligned_cols=188 Identities=18% Similarity=0.287 Sum_probs=165.6
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCC-CCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDS-PDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~-~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~ 79 (197)
+||+|||+++++|+++.|+.||++|+|+++||+++.+.. ....++++++++|||++||++|+||++|+++.+.|.+.+|
T Consensus 274 ~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d 353 (463)
T PLN02774 274 YSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQD 353 (463)
T ss_pred HhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCC
Confidence 489999999999999999999999999999999998642 1223499999999999999999999999999888999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHHh
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll 159 (197)
++++|+.||||+.|+++.+.+||||++|+||++|+||||++++.. ....|+|||+|+|.|+|++||++|++++++.|+
T Consensus 354 ~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~--~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll 431 (463)
T PLN02774 354 MELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE--SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFV 431 (463)
T ss_pred eeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC--CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975432 123699999999999999999999999999999
Q ss_pred hhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEe
Q psy16719 160 RRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEP 196 (197)
Q Consensus 160 ~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~ 196 (197)
++|+|++.++. +... ..+..|+++++|++++
T Consensus 432 ~~f~~~~~~~~----~~~~--~~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 432 TRYRWEEVGGD----KLMK--FPRVEAPNGLHIRVSP 462 (463)
T ss_pred HhceEEECCCC----cccc--CCCCCCCCCceEEeee
Confidence 99999998762 1111 2245588899999875
No 21
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1.6e-47 Score=327.93 Aligned_cols=169 Identities=21% Similarity=0.440 Sum_probs=155.5
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCcc-ceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+|+++||+++++..+...++++++++|||++||++|+||++|+++. +.|.+.+|
T Consensus 299 ~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d 378 (502)
T PLN02966 299 VAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQD 378 (502)
T ss_pred hccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCC
Confidence 59999999999999999999999999999999999975333334999999999999999999999999997 58999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCC-CCCCCCCCCCCCCCCCCC-CCCCCCcccCCCCcCCccHHHHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSH-RNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 157 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~-~~p~~F~p~R~l~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ 157 (197)
++++|+.||+||.|.++.|.+||||++| +||++|+||||++++... .....|+|||+|+|+|+|++||++|+++++|.
T Consensus 379 ~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ 458 (502)
T PLN02966 379 TKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYAN 458 (502)
T ss_pred eeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999754321 24568999999999999999999999999999
Q ss_pred HhhhCeEeeCCC
Q psy16719 158 ILRRYKILPGDK 169 (197)
Q Consensus 158 ll~~f~~~~~~~ 169 (197)
|+++|+|+..++
T Consensus 459 ll~~f~i~~~~~ 470 (502)
T PLN02966 459 LLLNFNFKLPNG 470 (502)
T ss_pred HHHhceeeCCCC
Confidence 999999998876
No 22
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=5.5e-47 Score=325.68 Aligned_cols=194 Identities=25% Similarity=0.473 Sum_probs=168.9
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCcc-ceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+|+++||+++++.. ..+ +++++++|||++||++|+||++|+++. +.|.+.+|
T Consensus 307 ~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~-~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d 384 (517)
T PLN02687 307 TAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD-RLV-SESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEE 384 (517)
T ss_pred ccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-CCC-CHHHhhhCHHHHHHHHHHHccCCCccccccccCCCC
Confidence 589999999999999999999999999999999998742 334 999999999999999999999999997 78999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCcccCCCCcCCccHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS-----HRNPSGYVPFSLGPRGCIGSKYAMLQMKTT 154 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 154 (197)
++++|+.||+|+.|.++.|.+||||++|+||++|+||||++++.. ......|+|||.|+|.|+|++||++|++++
T Consensus 385 ~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~ 464 (517)
T PLN02687 385 CEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLL 464 (517)
T ss_pred eeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975421 123567999999999999999999999999
Q ss_pred HHHHhhhCeEeeCCCCCCcccce--eecceeEeeCCCceeEEEeC
Q psy16719 155 ISTILRRYKILPGDKCKSLQDIR--FEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 155 l~~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~R 197 (197)
++.|+++|++++.++.. +.++. ....+++.+..++++++++|
T Consensus 465 la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~R 508 (517)
T PLN02687 465 TATLVHAFDWELADGQT-PDKLNMEEAYGLTLQRAVPLMVHPRPR 508 (517)
T ss_pred HHHHHHhcceecCCCCC-cccCCcccccceeeecCCCeEEeeccC
Confidence 99999999999986521 12232 23355666666788888876
No 23
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=7.8e-47 Score=324.52 Aligned_cols=194 Identities=25% Similarity=0.439 Sum_probs=169.2
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCcc-ceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+|+++||+++++.. +.+ +++++++|||++|||+|++|++|+++. +.|.+.+|
T Consensus 306 ~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~-~~~-t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d 383 (514)
T PLN03112 306 AAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRN-RMV-QESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRA 383 (514)
T ss_pred ccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCC-CcC-ChhhhccCcHHHHHHHHHhccCCCcccccccccCCC
Confidence 599999999999999999999999999999999998753 334 999999999999999999999999997 68999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCcccCCCCcCCccHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS-----HRNPSGYVPFSLGPRGCIGSKYAMLQMKTT 154 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~ 154 (197)
++++|+.||+|+.|.++.+.+||||++|+||++|+||||+++.+. ......|+|||.|+|.|+|++||++|++++
T Consensus 384 ~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~ 463 (514)
T PLN03112 384 TTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMA 463 (514)
T ss_pred eeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998764321 123467999999999999999999999999
Q ss_pred HHHHhhhCeEeeCCCCCCcccce--eecceeEeeCCCceeEEEeC
Q psy16719 155 ISTILRRYKILPGDKCKSLQDIR--FEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 155 l~~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~R 197 (197)
++.|+++|+|++.++.. ..++. ...++++.+.+++.+++.+|
T Consensus 464 la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r 507 (514)
T PLN03112 464 LARLFHCFDWSPPDGLR-PEDIDTQEVYGMTMPKAKPLRAVATPR 507 (514)
T ss_pred HHHHHHheeeecCCCCC-cccCCCccccCcccccCCCeEEEeecC
Confidence 99999999999875411 12232 23356666777999999987
No 24
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=8.8e-47 Score=319.64 Aligned_cols=187 Identities=20% Similarity=0.237 Sum_probs=167.6
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCC--CCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCc
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGD--SPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPY 78 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~--~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~ 78 (197)
+||+|||+.+++|+++.|+.||++|+++++||+++++. ..+..++++++.+|||++|||+|++|++|+++.+.|.+.+
T Consensus 261 ~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~ 340 (452)
T PLN03141 261 IPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMK 340 (452)
T ss_pred HhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecC
Confidence 58999999999999999999999999999999988642 1122349999999999999999999999999888999999
Q ss_pred eeecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHH
Q psy16719 79 EVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158 (197)
Q Consensus 79 ~~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~l 158 (197)
|++++||.||+|+.|+++.+.+|+|+++|+||++|+||||++.+. .+..|+|||+|+|.|+|++||.+|+++++|.|
T Consensus 341 d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~---~~~~~~pFG~G~R~C~G~~lA~~el~~~la~l 417 (452)
T PLN03141 341 DVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM---NNSSFTPFGGGQRLCPGLDLARLEASIFLHHL 417 (452)
T ss_pred CeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC---CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997532 35689999999999999999999999999999
Q ss_pred hhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 159 LRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 159 l~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+++|+|+..++ . .. ...++.|+.++.|++++|
T Consensus 418 l~~f~~~~~~~---~-~~---~~~~~~~~~~~~~~~~~~ 449 (452)
T PLN03141 418 VTRFRWVAEED---T-IV---NFPTVRMKRKLPIWVTRI 449 (452)
T ss_pred HhcCeeecCCC---C-ee---ecccccCCCCceEEEEeC
Confidence 99999998765 1 11 235788999999999987
No 25
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.4e-46 Score=323.91 Aligned_cols=193 Identities=23% Similarity=0.423 Sum_probs=167.2
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccc-eeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~-~r~~~~~ 79 (197)
+||+|||+++++|++++|+.||++|+|+++||+++++.. .. ++++++.+|||++||++|+||++|+++.. .|.+.+|
T Consensus 324 ~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~-~~-~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d 401 (534)
T PLN03018 324 IAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKD-RL-VQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQD 401 (534)
T ss_pred HHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC-CC-CCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCC
Confidence 589999999999999999999999999999999999742 33 49999999999999999999999999985 7899999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCcccCCCCcCCccHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSH------RNPSGYVPFSLGPRGCIGSKYAMLQMKT 153 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~ 153 (197)
+.++|+.||+|+.|.++.|++|+||++|+||++|+||||+++++.. ..+..|+|||.|+|.|+|++||.+|+++
T Consensus 402 ~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~ 481 (534)
T PLN03018 402 TTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVM 481 (534)
T ss_pred eeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999754321 2456899999999999999999999999
Q ss_pred HHHHHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 154 TISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 154 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+++.|+++|+|++.++.. ..++....+.+..| .++++++++|
T Consensus 482 ~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~p-~~~~v~~~~R 523 (534)
T PLN03018 482 MLARFLQGFNWKLHQDFG-PLSLEEDDASLLMA-KPLLLSVEPR 523 (534)
T ss_pred HHHHHHHhceEEeCCCCC-CCCccccccceecC-CCeEEEEEec
Confidence 999999999999876521 11222122444444 5999999987
No 26
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=1.3e-46 Score=319.42 Aligned_cols=188 Identities=22% Similarity=0.370 Sum_probs=168.5
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCC-CCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSP-DSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+|+++|++++++..+ ...++++++++++|++||++|+||++|+++...|.+.+|
T Consensus 274 ~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d 353 (463)
T PLN02196 274 FAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVED 353 (463)
T ss_pred HhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccc
Confidence 5899999999999999999999999999999999986421 233499999999999999999999999999988999999
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHHh
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll 159 (197)
+.++|+.||+|+.|.++.+++|+||++|+||++|+||||++.. .+..++|||.|+|.|+|+++|++|++++++.|+
T Consensus 354 ~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll 429 (463)
T PLN02196 354 VEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLT 429 (463)
T ss_pred cccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999632 456899999999999999999999999999999
Q ss_pred hhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 160 RRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 160 ~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
++|+|++.++ +.++ ....+..|+++++|+++++
T Consensus 430 ~~f~~~~~~~---~~~~--~~~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 430 TKYRWSIVGT---SNGI--QYGPFALPQNGLPIALSRK 462 (463)
T ss_pred HhcEEEEcCC---CCce--EEcccccCCCCceEEEecC
Confidence 9999999875 2233 3455677999999999864
No 27
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=3e-46 Score=319.17 Aligned_cols=190 Identities=29% Similarity=0.537 Sum_probs=166.7
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccc-eeecCce
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYE 79 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~-~r~~~~~ 79 (197)
+||+|||+++++|++++|++||++|+++++||+++++. ... +++++++|||++||++|+||++|+++.. .|.+.+|
T Consensus 288 ~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~--~~~-~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~ 364 (489)
T PLN02936 288 VAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG--RPP-TYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVED 364 (489)
T ss_pred HHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC--CCC-CHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCc
Confidence 48999999999999999999999999999999999874 334 9999999999999999999999999875 5555677
Q ss_pred eecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCcccCCCCcCCccHHHHHHHHHHHHH
Q psy16719 80 VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSS---HRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIS 156 (197)
Q Consensus 80 ~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 156 (197)
+.++|+.||+|+.|.++.+.+||||++|+||++|+||||+.++.. ...+..|+|||.|+|.|+|++||++|++++++
T Consensus 365 ~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la 444 (489)
T PLN02936 365 VLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALA 444 (489)
T ss_pred cccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 778999999999999999999999999999999999999965421 12245899999999999999999999999999
Q ss_pred HHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 157 TILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 157 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
.|+++|++++.++. ++....+++..|+.+++|++++|
T Consensus 445 ~ll~~f~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~R 481 (489)
T PLN02936 445 VLLQRLDLELVPDQ----DIVMTTGATIHTTNGLYMTVSRR 481 (489)
T ss_pred HHHHhCeEEecCCC----ccceecceEEeeCCCeEEEEEee
Confidence 99999999998752 22333456777888999999987
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=4.3e-46 Score=317.96 Aligned_cols=188 Identities=23% Similarity=0.371 Sum_probs=168.4
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCC--C-CCCCHHhhccChHHHHHHHHHhcCCCCCccceeecC
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSP--D-SAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAP 77 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~--~-~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~ 77 (197)
+||+|||+.+++|++++|++||++|+|+++|++++++... . .+ +++++++|||++|+|+|+||++|+++...|.+.
T Consensus 297 ~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~-~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~ 375 (490)
T PLN02302 297 NAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGL-TLKDVRKMEYLSQVIDETLRLINISLTVFREAK 375 (490)
T ss_pred HhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCC-CHHHHhcChHHHHHHHHHHHhCCCcccchhccc
Confidence 5899999999999999999999999999999999986421 1 24 899999999999999999999999998889999
Q ss_pred ceeecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHH
Q psy16719 78 YEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTIST 157 (197)
Q Consensus 78 ~~~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ 157 (197)
+|++++|+.||+|+.|.++.+++||||++|+||++|+||||++.. ..+..++|||.|+|.|+|++||.+|++++++.
T Consensus 376 ~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~---~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ 452 (490)
T PLN02302 376 TDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT---PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHH 452 (490)
T ss_pred CCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC---CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999643 24568999999999999999999999999999
Q ss_pred HhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 158 ILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 158 ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
|+++|++++.++ ..++. ...+..|++++.+++++|
T Consensus 453 ll~~f~~~~~~~---~~~~~--~~~~~~p~~~~~~~~~~~ 487 (490)
T PLN02302 453 FLLGYRLERLNP---GCKVM--YLPHPRPKDNCLARITKV 487 (490)
T ss_pred HHhcCeeEEcCC---CCcce--eCCCCCCCCCceEEEEec
Confidence 999999999865 12333 334588899999999876
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=8.6e-46 Score=314.95 Aligned_cols=190 Identities=18% Similarity=0.298 Sum_probs=170.8
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCC--CCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCc
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDS--PDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPY 78 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~--~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~ 78 (197)
+||+|||+++++|++++|++||++|+++++|++++.+.. .... +++++.++||++|+++|+||++|+++.+.|.+.+
T Consensus 277 ~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~-~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~ 355 (472)
T PLN02987 277 VAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSL-EWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMT 355 (472)
T ss_pred HhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCC-CHHHHhcChHHHHHHHHHHHccCCcCCccccCCC
Confidence 589999999999999999999999999999999987532 2334 8999999999999999999999999888899999
Q ss_pred eeecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHH
Q psy16719 79 EVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTI 158 (197)
Q Consensus 79 ~~~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~l 158 (197)
|++++|+.||+|+.|.++.+.+|+||++|+||++|+||||++.+........++|||+|+|.|+|++||.+|++++++.|
T Consensus 356 d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~l 435 (472)
T PLN02987 356 DIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRL 435 (472)
T ss_pred CeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754433345689999999999999999999999999999
Q ss_pred hhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 159 LRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 159 l~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+++|++++.++ .++.+ ..+++|.+++.+++++|
T Consensus 436 l~~f~~~~~~~----~~~~~--~~~~~p~~~~~~~~~~r 468 (472)
T PLN02987 436 VTRFSWVPAEQ----DKLVF--FPTTRTQKRYPINVKRR 468 (472)
T ss_pred HhceEEEECCC----Cceee--cccccCCCCceEEEEec
Confidence 99999999875 23333 45889998999999987
No 30
>KOG0684|consensus
Probab=100.00 E-value=3.2e-44 Score=292.09 Aligned_cols=193 Identities=31% Similarity=0.519 Sum_probs=175.2
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||..||+++..|++.+|++||+.++.+++|+.+++|+....+ ++++++.||.|++||+|||||+||.+.+.|.+.+|.
T Consensus 283 wA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l-~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~ 361 (486)
T KOG0684|consen 283 WAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKL-TYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDL 361 (486)
T ss_pred HhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCC-CHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccce
Confidence 4899999999999999999999999999999999998766667 999999999999999999999999999999999999
Q ss_pred ecCC----EEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCcccCCCCcCCccHHHHHHHH
Q psy16719 81 QCGD----YTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHR-----NPSGYVPFSLGPRGCIGSKYAMLQM 151 (197)
Q Consensus 81 ~~~g----~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~-----~~~~~~~Fg~G~r~C~G~~~A~~e~ 151 (197)
++.+ |.||+|..|.++.+.+|+||++|+||+.|+|+||++++++.. -.+.+||||+|.+.|||+.||.+|+
T Consensus 362 tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eI 441 (486)
T KOG0684|consen 362 TVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEI 441 (486)
T ss_pred eeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHH
Confidence 9966 999999999999999999999999999999999997776541 2345799999999999999999999
Q ss_pred HHHHHHHhhhCeEeeCCCCCCcccceeecceeEeeCCCceeEEEeC
Q psy16719 152 KTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197 (197)
Q Consensus 152 ~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R 197 (197)
+.++..+|++||++++++. .++++++ .+++.|.++++++.++|
T Consensus 442 k~~~~l~L~~fdleLid~~--~P~~d~s-~~v~~P~g~v~irYK~R 484 (486)
T KOG0684|consen 442 KQFISLLLRHFDLELIDGP--FPEVDYS-RMVMQPEGDVRIRYKRR 484 (486)
T ss_pred HHHHHHHHHHcceeecCCC--CCCCCHH-HhhcCCCCCceEEEeec
Confidence 9999999999999999961 4455553 34889999999999987
No 31
>PLN02648 allene oxide synthase
Probab=100.00 E-value=2.9e-39 Score=274.72 Aligned_cols=165 Identities=19% Similarity=0.292 Sum_probs=144.4
Q ss_pred CCcchhhhHHHHhhhHHhhChh-HHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 2 FGVDFEIQRNHYSQHPYLEAVE-SSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 2 ag~~t~~~~~~~~l~~l~~~p~-~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+|+++++++++|++++|++||+ +|+++++||+++++..++.+ +++++++|||+++|++|+||++|+++...|.+.+|+
T Consensus 283 ~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~-t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~ 361 (480)
T PLN02648 283 NAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGV-TFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDF 361 (480)
T ss_pred HhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCC-CHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCE
Confidence 3566677899999999999995 99999999999986433345 999999999999999999999999999888899999
Q ss_pred ecC----CEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc---------CCCCcCCccHHHH
Q psy16719 81 QCG----DYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPF---------SLGPRGCIGSKYA 147 (197)
Q Consensus 81 ~~~----g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A 147 (197)
+++ ||.||+|+.|+++.+.+||||++|+||++|+|+||++++... ...+++| |+|+|.|+|++||
T Consensus 362 ~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~--~~~~~~f~~g~~~~~~G~G~R~C~G~~~A 439 (480)
T PLN02648 362 VIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK--LLKYVFWSNGRETESPTVGNKQCAGKDFV 439 (480)
T ss_pred EEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc--cccccccCCCcccCCCCCCCccCccHHHH
Confidence 996 799999999999999999999999999999999998653321 1233343 6778999999999
Q ss_pred HHHHHHHHHHHhhhCe-EeeCCC
Q psy16719 148 MLQMKTTISTILRRYK-ILPGDK 169 (197)
Q Consensus 148 ~~e~~~~l~~ll~~f~-~~~~~~ 169 (197)
++|++++++.|+++|+ |++.++
T Consensus 440 ~~e~~~~la~Ll~~f~~~~l~~~ 462 (480)
T PLN02648 440 VLVARLFVAELFLRYDSFEIEVD 462 (480)
T ss_pred HHHHHHHHHHHHHHhCEEeecCC
Confidence 9999999999999998 998776
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-38 Score=265.57 Aligned_cols=164 Identities=27% Similarity=0.526 Sum_probs=146.2
Q ss_pred CCCcchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhCCCCCCCCCHHhhccChHHHHHHHHHhcCCCCCccceeecCcee
Q psy16719 1 MFGVDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEV 80 (197)
Q Consensus 1 ~ag~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~ 80 (197)
+||+|||+++++|+++.|++||+.++++++|.+. +|+.++++|+||++|+++...|.+.+|+
T Consensus 246 ~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~ 307 (411)
T COG2124 246 VAGHETTANALAWALYALLRHPDQLAKLRAEPDR------------------PLLEAVVEETLRLYPPVPLARRVATEDV 307 (411)
T ss_pred HhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch------------------HHHHHHHHHHHHhCCchhccceeccCCE
Confidence 5999999999999999999999999999987653 7999999999999999999899999999
Q ss_pred ecCCEEeCCCCEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHHHHHHHHHHHHHHhh
Q psy16719 81 QCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160 (197)
Q Consensus 81 ~~~g~~ip~g~~v~~~~~~~~~~~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~ 160 (197)
+++|+.||+|+.|+++++++||||+.|++|++|+|+||. ..++|||+|+|.|+|.+||++|++++++.|++
T Consensus 308 ~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~---------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~ 378 (411)
T COG2124 308 ELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN---------NAHLPFGGGPHRCLGAALARLELKVALAELLR 378 (411)
T ss_pred eeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC---------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999996 57999999999999999999999999999999
Q ss_pred hCeEeeCCCCCCcccceeecceeEeeCCCceeEEEe
Q psy16719 161 RYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEP 196 (197)
Q Consensus 161 ~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~ 196 (197)
+|++....+ . .... ...+..+..+..+.++.
T Consensus 379 r~~~~~~~~-~--~~~~--~~~~~~~~g~~~l~v~~ 409 (411)
T COG2124 379 RFPLLLLAE-P--PPLV--RRPTLVPRGGERLPVRR 409 (411)
T ss_pred hCchhhcCC-C--CCcc--ccccccCCCcceeeeec
Confidence 999988775 1 1121 24455566566666654
No 33
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=68.09 E-value=4.4 Score=28.79 Aligned_cols=23 Identities=26% Similarity=0.598 Sum_probs=16.9
Q ss_pred cCCccHHHHHHHHHHHHHHHhhh
Q psy16719 139 RGCIGSKYAMLQMKTTISTILRR 161 (197)
Q Consensus 139 r~C~G~~~A~~e~~~~l~~ll~~ 161 (197)
.+|.|+.||+..+-.++..|+..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 48999999999999999999863
No 34
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=64.39 E-value=2.6 Score=32.13 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=31.5
Q ss_pred ChHHHHHHHHHhcCCCCCccceeecCceeecCCEEeCCCCEEEe
Q psy16719 52 LDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAI 95 (197)
Q Consensus 52 l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~ 95 (197)
-....|||.|+.-+.... .+.-+..+|+.++|..||+|+.++-
T Consensus 52 ~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence 346778888887664332 2334567889999999999998864
No 35
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=62.27 E-value=6.1 Score=23.80 Aligned_cols=9 Identities=56% Similarity=1.154 Sum_probs=6.9
Q ss_pred CCCCCCCCC
Q psy16719 113 FDPDRFLPS 121 (197)
Q Consensus 113 F~p~R~l~~ 121 (197)
-||||||.-
T Consensus 43 PDPERWLP~ 51 (59)
T PF08492_consen 43 PDPERWLPK 51 (59)
T ss_pred CCccccCch
Confidence 389999853
No 36
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=47.68 E-value=39 Score=21.79 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=29.0
Q ss_pred cchhhhHHHHhhhHHhhChhHHHHHHHHHHHHhC
Q psy16719 4 VDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLG 37 (197)
Q Consensus 4 ~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~~ 37 (197)
++++++...-++.+..+||+..+++.+.+.+-+.
T Consensus 46 y~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~ 79 (87)
T PF14129_consen 46 YGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE 79 (87)
T ss_pred cCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 4567788888999999999999999999988764
No 37
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=46.74 E-value=18 Score=21.64 Aligned_cols=17 Identities=6% Similarity=-0.083 Sum_probs=14.6
Q ss_pred hhhHHhhChhHHHHHHH
Q psy16719 14 SQHPYLEAVESSFRVYH 30 (197)
Q Consensus 14 ~l~~l~~~p~~~~~~~~ 30 (197)
...+|.+||++.+++.+
T Consensus 5 iV~YLv~nPevl~kl~~ 21 (57)
T PF05952_consen 5 IVNYLVQNPEVLEKLKE 21 (57)
T ss_pred HHHHHHHChHHHHHHHc
Confidence 46789999999999986
No 38
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=38.13 E-value=44 Score=22.01 Aligned_cols=29 Identities=10% Similarity=0.201 Sum_probs=23.2
Q ss_pred hhHHHHhhhHHhhChhHHHHHHHHHHHHh
Q psy16719 8 IQRNHYSQHPYLEAVESSFRVYHELQDVL 36 (197)
Q Consensus 8 ~~~~~~~l~~l~~~p~~~~~~~~Ei~~~~ 36 (197)
-.++.|.+...-..|+-.+++++||+++-
T Consensus 53 l~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 53 LFTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 34566777777789999999999999874
No 39
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=37.62 E-value=47 Score=20.42 Aligned_cols=14 Identities=29% Similarity=0.479 Sum_probs=12.1
Q ss_pred hHHHHHHHHHhcCC
Q psy16719 53 DLLTRVIKETMRLF 66 (197)
Q Consensus 53 ~~l~a~i~E~lRl~ 66 (197)
.+++.+|+|++|+.
T Consensus 41 ~fv~~~IkEA~RFk 54 (65)
T PF15300_consen 41 QFVEMIIKEAARFK 54 (65)
T ss_pred HHHHHHHHHHHHHH
Confidence 57999999999974
No 40
>KOG3506|consensus
Probab=36.17 E-value=17 Score=21.45 Aligned_cols=11 Identities=36% Similarity=0.739 Sum_probs=9.2
Q ss_pred cccCCCCcCCc
Q psy16719 132 VPFSLGPRGCI 142 (197)
Q Consensus 132 ~~Fg~G~r~C~ 142 (197)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 47999999984
No 41
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=35.27 E-value=14 Score=31.31 Aligned_cols=20 Identities=30% Similarity=0.408 Sum_probs=16.0
Q ss_pred cCceeecCCEEeCCCCEEEe
Q psy16719 76 APYEVQCGDYTIPAGASIAI 95 (197)
Q Consensus 76 ~~~~~~~~g~~ip~g~~v~~ 95 (197)
..+|+.++|..||+||.++-
T Consensus 278 Lle~~~v~~~~ipkgt~l~g 297 (410)
T TIGR03779 278 LLEPIQAGDLVIPKGTVLYG 297 (410)
T ss_pred EcCceeeCCEEecCCCEEEE
Confidence 45677778999999998863
No 42
>PRK06789 flagellar motor switch protein; Validated
Probab=31.31 E-value=70 Score=20.20 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=29.3
Q ss_pred HHHHHhcCCCCCcc-ceeecCce--eecCCEEeCCCCEEEec
Q psy16719 58 VIKETMRLFPAAPV-IARSAPYE--VQCGDYTIPAGASIAIF 96 (197)
Q Consensus 58 ~i~E~lRl~~~~~~-~~r~~~~~--~~~~g~~ip~g~~v~~~ 96 (197)
-++|-+.|.+..-. +-+.+.++ +.++|..|.+|..|.++
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~ 62 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN 62 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence 36788888887655 56666664 56699999999988764
No 43
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=30.59 E-value=30 Score=26.60 Aligned_cols=23 Identities=22% Similarity=0.483 Sum_probs=18.7
Q ss_pred ecchhh-hcCCCCCCCCCCCCCCC
Q psy16719 95 IFIYGL-HRHPQLWNNPNQFDPDR 117 (197)
Q Consensus 95 ~~~~~~-~~~~~~~~~p~~F~p~R 117 (197)
++-|.- +.|+.+|.|.+.|+|.|
T Consensus 188 iPGW~~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 188 IPGWWPDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCCCCCCCCcccccCccccCCCC
Confidence 344444 89999999999999988
No 44
>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.
Probab=28.08 E-value=75 Score=18.24 Aligned_cols=30 Identities=23% Similarity=0.046 Sum_probs=23.1
Q ss_pred CcchhhhHHHHhhhHHhhChhHHHHHHHHH
Q psy16719 3 GVDFEIQRNHYSQHPYLEAVESSFRVYHEL 32 (197)
Q Consensus 3 g~~t~~~~~~~~l~~l~~~p~~~~~~~~Ei 32 (197)
|.|..+-.++..+-+..-||+.+..+-.|+
T Consensus 18 gLd~etL~ici~L~e~GVnPeaLA~vI~el 47 (48)
T PF12554_consen 18 GLDRETLSICIELCENGVNPEALAAVIKEL 47 (48)
T ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence 556667777788888888888888777765
No 45
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=27.39 E-value=18 Score=26.83 Aligned_cols=35 Identities=20% Similarity=0.396 Sum_probs=23.4
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCcccCCCCcCCccHH
Q psy16719 111 NQFDPDRFLPSQS-SHRNPSGYVPFSLGPRGCIGSK 145 (197)
Q Consensus 111 ~~F~p~R~l~~~~-~~~~~~~~~~Fg~G~r~C~G~~ 145 (197)
.+|+|++|=.-=. ...+....+-|..|+-.|-|..
T Consensus 35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence 4688888821000 0124567899999999999975
No 46
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=26.67 E-value=46 Score=21.61 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhhhCeEeeCCC
Q psy16719 149 LQMKTTISTILRRYKILPGDK 169 (197)
Q Consensus 149 ~e~~~~l~~ll~~f~~~~~~~ 169 (197)
.-|+-++..+|+-|||.+++-
T Consensus 60 ~~IrdAVsqVLkGYDWtLVPm 80 (84)
T PF12444_consen 60 VCIRDAVSQVLKGYDWTLVPM 80 (84)
T ss_pred HHHHHHHHHHhccCCceeeec
Confidence 346788999999999999863
No 47
>cd00642 GTP_cyclohydro1 GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin triphosphate. The enzyme product is the precursor of tetrahydrofolate in eubacteria, fungi, and plants and of the folate analogs in methanogenic bacteria. In vertebrates and insects it is the biosynthtic precursor of tetrahydrobiopterin (BH4) which is involved in the formation of catacholamines, nitric oxide, and the stimulation of T lymphocytes. The biosynthetic reaction of BH4 is controlled by a regulatory protein GFRP which mediates feedback inhibition of GTP-CH-I by BH4. This inhibition is reversed by phenylalanine. The decameric GTP-CH-I forms a complex with two pentameric GFRP in the presence of phenylalanine or a combination of GTP and BH4, respectively.
Probab=23.03 E-value=1.2e+02 Score=22.92 Aligned_cols=27 Identities=4% Similarity=-0.025 Sum_probs=22.4
Q ss_pred HHHhhhHHhhChhHHHHHHHHHHHHhC
Q psy16719 11 NHYSQHPYLEAVESSFRVYHELQDVLG 37 (197)
Q Consensus 11 ~~~~l~~l~~~p~~~~~~~~Ei~~~~~ 37 (197)
+.-....+++.|++||++-.||.+.+.
T Consensus 103 l~RiV~~~arRlQiQERLt~qIa~al~ 129 (185)
T cd00642 103 LARIVEFFSRRLQVQERLTKQIAVAIQ 129 (185)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 445666788999999999999998875
No 48
>PRK11901 hypothetical protein; Reviewed
Probab=22.17 E-value=2.1e+02 Score=23.63 Aligned_cols=36 Identities=25% Similarity=0.435 Sum_probs=18.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCCCCcCCccHHH
Q psy16719 111 NQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKY 146 (197)
Q Consensus 111 ~~F~p~R~l~~~~~~~~~~~~~~Fg~G~r~C~G~~~ 146 (197)
|||.||.=|..+...+.+..-.-=+.+++.-+-|..
T Consensus 2 DEfkpe~elkPDtSDRrp~Rsr~~~~~pk~~vSRQh 37 (327)
T PRK11901 2 DEFKPEDELKPDTSDRRPTRSRKSSNGPKLAVSRQH 37 (327)
T ss_pred CcCCcccccCCCcccCCCcccccCCCCCCchHHHHH
Confidence 578887777666554333322223344555554443
No 49
>PLN03044 GTP cyclohydrolase I; Provisional
Probab=21.61 E-value=1.5e+02 Score=22.46 Aligned_cols=28 Identities=11% Similarity=0.183 Sum_probs=22.7
Q ss_pred HHHHhhhHHhhChhHHHHHHHHHHHHhC
Q psy16719 10 RNHYSQHPYLEAVESSFRVYHELQDVLG 37 (197)
Q Consensus 10 ~~~~~l~~l~~~p~~~~~~~~Ei~~~~~ 37 (197)
-+.-.....++.|++||++-.+|.+.+.
T Consensus 103 Kl~RiV~~~arRlQiQERLT~qIa~~l~ 130 (188)
T PLN03044 103 KLARIAEVYARRLQTQERLTRQIADAIV 130 (188)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3445666788999999999999998875
No 50
>TIGR00063 folE GTP cyclohydrolase I. GTP cyclohydrolase I (EC 3.5.4.16) catalyzes the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects.
Probab=20.85 E-value=1.4e+02 Score=22.42 Aligned_cols=27 Identities=7% Similarity=0.036 Sum_probs=22.1
Q ss_pred HHHhhhHHhhChhHHHHHHHHHHHHhC
Q psy16719 11 NHYSQHPYLEAVESSFRVYHELQDVLG 37 (197)
Q Consensus 11 ~~~~l~~l~~~p~~~~~~~~Ei~~~~~ 37 (197)
+.-.....++.|++||++-.+|.+.+.
T Consensus 98 l~RiV~~~arRlQiQERlT~qIa~~l~ 124 (180)
T TIGR00063 98 IARIVEFFARRPQVQERLTQQIAEALQ 124 (180)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 445566778999999999999998875
No 51
>COG0302 FolE GTP cyclohydrolase I [Coenzyme metabolism]
Probab=20.64 E-value=1.4e+02 Score=22.58 Aligned_cols=27 Identities=11% Similarity=0.110 Sum_probs=21.8
Q ss_pred HHHhhhHHhhChhHHHHHHHHHHHHhC
Q psy16719 11 NHYSQHPYLEAVESSFRVYHELQDVLG 37 (197)
Q Consensus 11 ~~~~l~~l~~~p~~~~~~~~Ei~~~~~ 37 (197)
+.-.....++.|++|+++-++|.+++.
T Consensus 112 iaRiV~~~arR~QvQErlT~qIA~al~ 138 (195)
T COG0302 112 IARIVDIFARRLQVQERLTEQIADALQ 138 (195)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 344556678999999999999998875
No 52
>PF09551 Spore_II_R: Stage II sporulation protein R (spore_II_R); InterPro: IPR014202 This entry is designated stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. SpoIIR is a signalling protein that links the activation of sigma E to the transcriptional activity of sigma F during sporulation [, ].
Probab=20.64 E-value=1.8e+02 Score=20.51 Aligned_cols=71 Identities=15% Similarity=0.140 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHh-----hccChHHHHHHHHHhcCCCCCcc----ceeecCceeecCCEEeCCCCE
Q psy16719 22 VESSFRVYHELQDVLGDSPDSAPTYDQ-----LQRLDLLTRVIKETMRLFPAAPV----IARSAPYEVQCGDYTIPAGAS 92 (197)
Q Consensus 22 p~~~~~~~~Ei~~~~~~~~~~~~~~~~-----~~~l~~l~a~i~E~lRl~~~~~~----~~r~~~~~~~~~g~~ip~g~~ 92 (197)
..+.-++|.+|.+.+...-....+.++ ..+++-++++..+.++=...-.. +.+.....-.++++++|+|..
T Consensus 19 Q~lKl~VRD~Vl~~l~~~~~~~~~~~ea~~~i~~~~~~Ie~~A~~~l~~~G~~y~v~v~~~~~~FPtK~YG~~~~PaG~Y 98 (130)
T PF09551_consen 19 QALKLKVRDAVLEYLSPWLSQAKSKEEAREVIRENLPEIEQIAEEVLAEEGYDYPVKVELGRFYFPTKTYGDIVLPAGEY 98 (130)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHhHHHHHHHHHHHHHHhCCCCcEEEEEEeeeCCCceECCEeccCCce
Confidence 445556666666655421111113333 25667788888877765432211 223233334558899999974
Done!