RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16719
(197 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 209 bits (533), Expect = 3e-66
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
S+ P E V R+ E+ +V+G ++ L RL L++V+KE++RL+P A
Sbjct: 271 SRQP--EIVA---RLQAEVDEVIGS--KRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTF 323
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R E +P + Y + R + +P F+PDRF P + Y P
Sbjct: 324 RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP--KPRFTYFP 381
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIR 193
FSLG R CIG ++A +++K ++ +L+R + Q + T++ L
Sbjct: 382 FSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG----QRFGLQEQATLKPLDPVLCT 437
Query: 194 IEPR 197
+ PR
Sbjct: 438 LRPR 441
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 197 bits (502), Expect = 2e-61
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
+ HP R+ E++ V G P ++ +++L VI E MRL PA V+
Sbjct: 291 ADHPEHAD-----RIRDEVEAVTGGRP---VAFEDVRKLRHTGNVIVEAMRLRPAVWVLT 342
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R A E + G Y IPAGA I Y + R P+ +++ +FDPDR+LP ++++ P
Sbjct: 343 RRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKP 402
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIR 193
FS G R C ++M Q+ + + +Y+ + G+T+R
Sbjct: 403 FSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAG----SNDAVRVGITLRPHDLLVRP 458
Query: 194 IEPR 197
+
Sbjct: 459 VARH 462
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 197 bits (503), Expect = 2e-61
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYT 86
+ E+Q V+G+ D +Q+L ++ I E+MR P ++ R A + Y
Sbjct: 331 AIIKEIQTVIGERD---IKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYP 387
Query: 87 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
+ G +I + I +HR + + PN+F + F + + PF GPRGC G
Sbjct: 388 VKKGTNIILNIGRMHR-LEFFPKPNEFTLENFAKN----VPYRYFQPFGFGPRGCAGKYI 442
Query: 147 AMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMR---SLPGNDIRIEPR 197
AM+ MK + T+LRR+ + ++ I+ +++ + ++ PR
Sbjct: 443 AMVMMKAILVTLLRRFHVKTLQGQC-VESIQKIHDLSLHPDETKNMLEMIFTPR 495
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 190 bits (486), Expect = 4e-59
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 10/184 (5%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
++ L+ + Y E + V G++ TYDQL+ L+LL R IKET+RL P ++
Sbjct: 280 ARDKTLQK-----KCYLEQKTVCGENLP-PLTYDQLKDLNLLDRCIKETLRLRPPIMIMM 333
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R A YTIP G + + R W F+PDR+L + YVP
Sbjct: 334 RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVP 393
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIR 193
F G CIG +A +Q+KT ST+LR Y+ D + + + IR
Sbjct: 394 FGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDG----YFPTVNYTTMIHTPENPVIR 449
Query: 194 IEPR 197
+ R
Sbjct: 450 YKRR 453
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 184 bits (470), Expect = 6e-57
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
+H A V EL ++ GD + ++ L+++ L V+KET+RL P ++
Sbjct: 273 MRHRDAYA-----AVIDELDELYGD--GRSVSFHALRQIPQLENVLKETLRLHPPLIILM 325
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSH-RNPSGYV 132
R A E + + I G +A +R P+ + +P+ F P R+ + N ++
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI 385
Query: 133 PFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDI 192
PF G C+G+ +A++Q+K S +LR Y+ +S ++ M ++ +
Sbjct: 386 PFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDH--SKMVVQLAQPAAV 443
Query: 193 RIEPR 197
R R
Sbjct: 444 RYRRR 448
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 184 bits (468), Expect = 1e-56
Identities = 34/184 (18%), Positives = 71/184 (38%), Gaps = 15/184 (8%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
++ +E + E+++ + + + R +E++R P ++
Sbjct: 281 MHPANVKHLE---ALRKEIEEFPAQLN----YNNVMDEMPFAERCARESIRRDPPLLMLM 333
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R +V+ G Y +P G IA H + + P ++DP+R + ++
Sbjct: 334 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE------KVEGAFIG 387
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIR 193
F G CIG K+ +LQ+KT ++T R Y + D + + + ++
Sbjct: 388 FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR--DEVPDPDYHTMVVGPTASQCRVK 445
Query: 194 IEPR 197
R
Sbjct: 446 YIRR 449
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 181 bits (462), Expect = 2e-55
Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
++P ++ + E VL D P+Y Q+++L + V+ E +RL+P AP +
Sbjct: 281 VKNP--HVLQ---KAAEEAARVLVDPV---PSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
Query: 74 RSAPYEVQ-CGDYTIPAGASIAIFIYGLHRHPQLW-NNPNQFDPDRFLPSQSSHRNPSGY 131
A + G+Y + G + + I LHR +W ++ +F P+RF + +
Sbjct: 333 LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA--IPQHAF 390
Query: 132 VPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGND 191
PF G R CIG ++A+ + + +L+ + ++ + +T++
Sbjct: 391 KPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTN----YELDIKETLTLKPEGFV- 445
Query: 192 IRIEPR 197
++ + +
Sbjct: 446 VKAKSK 451
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 167 bits (424), Expect = 8e-50
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYT 86
R+ E+Q VL D + P + L+ + L +KE+MRL P+ P R+ G+Y
Sbjct: 319 RLLQEVQSVLPD--NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYA 376
Query: 87 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
+P G + + L + + ++F P+R+L + NP ++PF +G R CIG +
Sbjct: 377 LPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKK-INPFAHLPFGIGKRMCIGRRL 435
Query: 147 AMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A LQ+ + I+++Y I+ D + + + I PR
Sbjct: 436 AELQLHLALCWIIQKYDIVATDN----EPVEMLHLGILVPSRELPIAFRPR 482
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 164 bits (418), Expect = 3e-49
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
QH + E RV E + T + L+++ L +V++E +RL P
Sbjct: 271 GQHS--DIRE---RVRQEQNKLQLSQE---LTAETLKKMPYLDQVLQEVLRLIPPVGGGF 322
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSG-YV 132
R + Q + P G ++ I H P L+ +P +FDP+RF P S+ NP +V
Sbjct: 323 RELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHV 382
Query: 133 PFSLGPRGCIGSKYAMLQMKTTISTILRRYK--ILPGDKCKSLQDIRFEFGMTMRSLPGN 190
PF G R C+G ++A L+MK + +++++ +LPG Q++ + R
Sbjct: 383 PFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPG------QNLELVVTPSPRPKDNL 436
Query: 191 DIRIEP 196
+++
Sbjct: 437 RVKLHS 442
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 163 bits (414), Expect = 2e-48
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYT 86
+ E+ LQ + LL IKET+RL P + + R ++ DY
Sbjct: 311 MLRAEVLAARHQ--AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYM 368
Query: 87 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
IPA + + IY L R P + +P FDP R+L + + F G R C+G +
Sbjct: 369 IPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKN-ITYFRNLGFGWGVRQCLGRRI 427
Query: 147 AMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A L+M + +L +++ + + L D+ F + + P I
Sbjct: 428 AELEMTIFLINMLENFRV----EIQHLSDVGTTFNLILM--PEKPISFTFW 472
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 162 bits (411), Expect = 6e-48
Identities = 27/154 (17%), Positives = 62/154 (40%), Gaps = 12/154 (7%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA--PYEVQCGD 84
R+ E++ V+ + T +++++L V+ E +R P A ++ D
Sbjct: 320 RLAEEIRSVIKSN-GGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHD 378
Query: 85 --YTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPF-------S 135
+ + AG + + R P++++ ++F P+RF+ + +
Sbjct: 379 AAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPT 438
Query: 136 LGPRGCIGSKYAMLQMKTTISTILRRYKILPGDK 169
+G + C G + +L + + I RRY +
Sbjct: 439 VGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV 472
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 160 bits (406), Expect = 2e-47
Identities = 32/179 (17%), Positives = 72/179 (40%), Gaps = 20/179 (11%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSA--PYEVQCGD 84
++ E++ + D T + ++++ L V+ E++R+ P P A + ++ D
Sbjct: 302 QLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHD 361
Query: 85 --YTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP---- 138
+ + G + + + P++++ P ++ PDRF+ YV +S GP
Sbjct: 362 ATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDG---EALLKYVWWSNGPETES 418
Query: 139 -----RGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDI 192
+ C G + +L + + + RRY + + +T+ L I
Sbjct: 419 PTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL----GESPLGAAVTLTFLKRASI 473
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 158 bits (403), Expect = 1e-46
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYT 86
++ E+ VL + + PTYD + +++ L V+ ET+RLFP A + R +V+
Sbjct: 308 KLQEEIDAVLPN--KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMF 365
Query: 87 IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKY 146
IP G + I Y LHR P+ W P +F P+RF + +P Y PF GPR CIG ++
Sbjct: 366 IPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRF 425
Query: 147 AMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A++ MK + +L+ + P + + ++ G ++ +++E R
Sbjct: 426 ALMNMKLALIRVLQNFSFKPCKETQ--IPLKLSLGGLLQPEKPVVLKVESR 474
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 154 bits (391), Expect = 8e-46
Identities = 40/184 (21%), Positives = 69/184 (37%), Gaps = 37/184 (20%)
Query: 14 SQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
S P + RV + L +E +RL+P A ++
Sbjct: 238 SHRPDWQK-----RVAESEEAALA--------------------AFQEALRLYPPAWILT 272
Query: 74 RSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVP 133
R + G+ +P G ++ + Y R + + F P+RFL + + Y P
Sbjct: 273 RRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDGEAFRPERFLEERGTPSG--RYFP 328
Query: 134 FSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIR 193
F LG R C+G +A+L+ + RR+++ P R +T+R P +
Sbjct: 329 FGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLP------FPRVLAQVTLR--PEGGLP 380
Query: 194 IEPR 197
PR
Sbjct: 381 ARPR 384
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 149 bits (379), Expect = 3e-43
Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 29/205 (14%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGDS--------PDSAPTYDQLQRLDLLTRVIKETMRLF 66
++P EA++ E++ L ++ + +L L +L +IKE++RL
Sbjct: 286 RNP--EAMK---AATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLS 340
Query: 67 PAAPVI---ARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQS 123
A+ I ++ G Y I IA++ +H P+++ +P F DR+L
Sbjct: 341 SASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENG 400
Query: 124 SHR---------NPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY--KILPGDKCKS 172
+ Y+PF G C G +A+ ++K + +L + +++ G
Sbjct: 401 KTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCP 460
Query: 173 LQDIRFEFGMTMRSLPGNDIRIEPR 197
D + P NDI + +
Sbjct: 461 PLDQSRAGLGILP--PLNDIEFKYK 483
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 146 bits (370), Expect = 6e-42
Identities = 43/205 (20%), Positives = 77/205 (37%), Gaps = 28/205 (13%)
Query: 15 QHPYLEAVESSFRVYHELQDVLGD-----SPDSAPTYDQLQRLDLLTRVIKETMRLFPAA 69
++P EA+ V EL+ +L S + L +L V+ E++RL A
Sbjct: 291 KNP--EALA---AVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA- 344
Query: 70 PVIARSA--PYEVQCGD---YTIPAGASIAIF-IYGLHRHPQLWNNPNQFDPDRFLPSQS 123
P I R + D + + G + +F R P+++ +P F +RFL
Sbjct: 345 PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDG 404
Query: 124 SH---------RNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY--KILPGDKCKS 172
S R + +P+ G C+G YA+ +K + +L +++ D
Sbjct: 405 SEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIP 464
Query: 173 LQDIRFEFGMTMRSLPGNDIRIEPR 197
D+ M+ +R R
Sbjct: 465 EFDLSRYGFGLMQPEHDVPVRYRIR 489
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 133 bits (336), Expect = 2e-37
Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 11/150 (7%)
Query: 47 DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL 106
+Q+ D ++E R +P P + A + + P G + + +YG +
Sbjct: 266 ALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 107 WNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP----RGCIGSKYAMLQMKTTISTILRRY 162
W +P +F P+RF + ++P G C G + MK ++
Sbjct: 326 WADPQEFRPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 163 KILPGDKCKSLQDIRF----EFGMTMRSLP 188
+ D+ S+ R + G MR++
Sbjct: 383 RYDVPDQDLSIDFARLPALPKSGFVMRNVH 412
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 129 bits (326), Expect = 4e-36
Identities = 27/155 (17%), Positives = 57/155 (36%), Gaps = 13/155 (8%)
Query: 48 QLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLW 107
+ ++E R +P P + + + G S+ + +YG + P+LW
Sbjct: 269 RSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLW 328
Query: 108 NNPNQFDPDRFLPSQSSHRNPSGYVPFSLGP----RGCIGSKYAMLQMKTTISTILRRYK 163
++P++F P+RF + N +P G C G + MK ++ ++ + +
Sbjct: 329 DHPDEFRPERFAERE---ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIE 385
Query: 164 ILPGDKCKSLQDIRFEFG-MTMRSLPGNDIRIEPR 197
+ Q + + M G + R
Sbjct: 386 YDVPE-----QSLHYSLARMPSLPESGFVMSGIRR 415
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 121 bits (306), Expect = 6e-33
Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 21/186 (11%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYEVQC--- 82
V E+ ++ + + V+ ET+RL AA + + ++
Sbjct: 289 AVREEI-----QGGKHLRLEERQKNTPVFDSVLWETLRLTAAALITRDVTQDKKICLSNG 343
Query: 83 GDYTIPAGASIAIF-IYGLHRHPQLWNNPNQFDPDRFLPS---------QSSHRNPSGYV 132
+Y + G + +F PQ+ P F DRFL + ++ R V
Sbjct: 344 QEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSV 403
Query: 133 PFSLGPRGCIGSKYAMLQMKTTISTILRRYKI-LPGDKCKSLQDIRFEFGMTMRSLPGND 191
P+ C G +A+ +K + TIL R+ + L +G + P D
Sbjct: 404 PWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGI-LQPAGD 462
Query: 192 IRIEPR 197
+ I R
Sbjct: 463 LEIRYR 468
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 103 bits (259), Expect = 3e-26
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 10/175 (5%)
Query: 27 RVYHELQDVLG-DSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGD 84
R+ EL LG + S TY RL LL I E +RL P P+ +
Sbjct: 315 RLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFG 374
Query: 85 YTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGS 144
Y IP G + + G H +W P++F PDRFL ++ + F G R C+G
Sbjct: 375 YDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGANPS----ALAFGCGARVCLGE 430
Query: 145 KYAMLQMKTTISTILRRY--KILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A L++ ++ +L+ + P SL G+ ++ P +R++PR
Sbjct: 431 SLARLELFVVLARLLQAFTLLPPPVGALPSL-QPDPYCGVNLKVQPFQ-VRLQPR 483
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 101 bits (253), Expect = 2e-25
Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E+ DV+G P + T VI E R P+ + +++ +
Sbjct: 308 RVQQEIDDVIG--QVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGF 365
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G ++ + + + +W P +F P+ FL +Q P ++PFS G R C+G
Sbjct: 366 RIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEP 425
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A +++ +++L+ + F + P + PR
Sbjct: 426 LARMELFLFFTSLLQHFSFSVPTGQPRP-SHHGVFAFLVSPSPYE-LCAVPR 475
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 100 bits (252), Expect = 3e-25
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
+V E+ ++G P+ P++D ++ V+ E +R P+ I + + Y
Sbjct: 309 QVQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGY 366
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
+IP G ++ +Y +H + W +P F P+RFL S VPFSLG R C+G
Sbjct: 367 SIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEH 426
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A ++M + +L+R+ + + D++ GMT++ P I E R
Sbjct: 427 LARMEMFLFFTALLQRFHLHFPHELVP--DLKPRLGMTLQPQPYL-ICAERR 475
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 98.4 bits (246), Expect = 2e-24
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 12/176 (6%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV EL V+G D P L + + E MR PV I + Y
Sbjct: 315 RVQAELDQVVG--RDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGY 372
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHR--NPSGYVPFSLGPRGCIG 143
IP + + + ++ P W NP FDP RFL S + FS+G R CIG
Sbjct: 373 HIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIG 432
Query: 144 SKYAMLQMKTTISTILRRY--KILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
+ + +Q+ IS + + + P + + F +G+T++ + + R
Sbjct: 433 EELSKMQLFLFISILAHQCDFRANPNEP----AKMNFSYGLTIKPKSFK-VNVTLR 483
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 98.0 bits (245), Expect = 3e-24
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
++Y E+ +G PT RL LL I+E +RL P AP+ I A + G++
Sbjct: 309 KLYEEIDQNVG--FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEF 366
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPS--QSSHRNPSGYVPFSLGPRGCIG 143
+ G + I ++ LH + + W+ P+QF P+RFL Y+PF GPR CIG
Sbjct: 367 AVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIG 426
Query: 144 SKYAMLQMKTTISTILRRY--KILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A ++ ++ +L+R+ ++ + L + + ++I+ R
Sbjct: 427 EILARQELFLIMAWLLQRFDLEVPDDGQ---LPSLEGIPKVVFLIDSFK-VKIKVR 478
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 96.5 bits (241), Expect = 8e-24
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 13/177 (7%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
++ EL V+G + P +L L I ET R P I S + +
Sbjct: 318 KIQKELDTVIG--RERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGF 375
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRN---PSGYVPFSLGPRGCI 142
IP + + + ++ P+LW +P++F P+RFL + + N + F +G R CI
Sbjct: 376 YIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCI 435
Query: 143 GSKYAMLQMKTTISTILRRY--KILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
G A ++ ++ +L++ + PG K D+ +G+TM+ R
Sbjct: 436 GEVLAKWEIFLFLAILLQQLEFSVPPGVK----VDLTPIYGLTMKHARCE-HVQARR 487
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 94.9 bits (237), Expect = 3e-23
Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 4/172 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
+++ E+ V+G P P Q + + V+ E R P + A + Y
Sbjct: 303 KLHEEIDRVIG--PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGY 360
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G + + + Q + +P +F P+ FL + + PFS G R C G
Sbjct: 361 LIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEG 420
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A +++ + IL+ + + P K + G + + PR
Sbjct: 421 LARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYK-LCVIPR 471
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 94.2 bits (235), Expect = 6e-23
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
RV E++ V+G P D ++ VI E RL P + + + Q Y
Sbjct: 304 RVQKEIEQVIG--SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 361
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP + + P+ + PN F+P FL + + + G++PFSLG R C+G
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A ++ +TIL+ + I + + E G+ IR R
Sbjct: 422 IARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQ-IRFLAR 472
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 93.8 bits (234), Expect = 7e-23
Identities = 36/172 (20%), Positives = 71/172 (41%), Gaps = 4/172 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
+V E++ V+G + +P + V+ E R P + + +++ +Y
Sbjct: 305 KVQEEIERVIG--RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNY 362
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
IP G +I I + + + + NP FDP FL + + ++PFS G R C+G
Sbjct: 363 LIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEA 422
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A +++ +++IL+ + + K+L G + P
Sbjct: 423 LAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPFYQ-LCFIPI 473
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 91.8 bits (229), Expect = 4e-22
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
Query: 27 RVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDY 85
+V+ E+ V+G + P ++ ++ + VI E R P+ +AR + + D+
Sbjct: 304 KVHEEIDRVIG--KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDF 361
Query: 86 TIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSK 145
+P G + + + R P ++NP F+P FL + + +VPFS+G R C G
Sbjct: 362 FLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEG 421
Query: 146 YAMLQMKTTISTILRRYKILPGDKCKSLQDIRFEFGMTMRSLPGNDIRIEPR 197
A +++ +T+++ +++ K + G + PR
Sbjct: 422 LARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT-MSFLPR 472
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 68.5 bits (168), Expect = 6e-14
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+Q+ + L+ R I ET+R P +I R + G I + I +R
Sbjct: 290 EQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANR 349
Query: 103 HPQLWNNPNQFDPDR-FLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
P+ + P+ F+ R L +S+ + ++ F G C+G+ +A +++ + +L +
Sbjct: 350 DPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDK 409
Query: 162 Y 162
Sbjct: 410 M 410
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 67.3 bits (165), Expect = 1e-13
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
D+ RL L +E +R R+ +V+ TI G + +F+ +R
Sbjct: 272 DEFARLRADPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANR 331
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P+ W++P+++D R SG+V F G C+G A L+ + ++ + R+
Sbjct: 332 DPRRWDDPDRYDI---------TRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKV 382
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 66.5 bits (163), Expect = 2e-13
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+QL +L DL+ ++E +R + AR A ++ TI G + + + +R
Sbjct: 255 EQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANR 314
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P ++ NP+ FD R+P+ ++ F G C+GS A L+ + I+T+L+R
Sbjct: 315 DPSIFTNPDVFDI---------TRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 66.2 bits (162), Expect = 3e-13
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
Q L + VI+ETMR P +++R A ++ G +T+P G ++ + + HR
Sbjct: 277 GQWAALAADGSRASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHR 336
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P + P++FDPD R ++ F G C+G+ A L+ + + R+
Sbjct: 337 DPTIVGAPDRFDPD---------RAQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 65.8 bits (161), Expect = 4e-13
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 16/122 (13%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
DQ + L + + ++E +RL +AR+ +V GD TIPAG + + +R
Sbjct: 271 DQRRLLLDDPEGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANR 330
Query: 103 HPQLWNNPNQF--DPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160
+ Q+ D R P + FS G C+G+ A +Q + ++ +L
Sbjct: 331 ------DERQYGPDAAELDV----TRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLA 380
Query: 161 RY 162
R
Sbjct: 381 RC 382
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 65.4 bits (160), Expect = 5e-13
Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 11/120 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+ +++E +R P P + R+ + IPA + ++ +R
Sbjct: 262 AHWDAAAEDPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANR 321
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
++P++FDP R + + F G C+G+ A L+ + + I+ R+
Sbjct: 322 DSDAHDDPDRFDPSR-------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 64.9 bits (159), Expect = 8e-13
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
DQL + L ++E +R R A EV+ G IP +++ + +R
Sbjct: 262 DQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 321
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P+ + +P++FD R+ G++ F G C+G A L+ + + + R+
Sbjct: 322 DPKQFPDPHRFDV---------TRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 65.1 bits (159), Expect = 8e-13
Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+R+ R + E +RL PA + R+A EV+ G++ I G + + + +R
Sbjct: 243 GLAERIADDPAAAQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANR 302
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P+++ P++ D D R + + + + +
Sbjct: 303 DPEVFAEPDRLDVD---------RPDADRALSAHRGHPGRLEELVTALATAALRAAAKAL 353
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 65.0 bits (159), Expect = 9e-13
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+ +I E +R+ P R +V+ G I AG+ I I +R
Sbjct: 254 EVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANR 313
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P+++++P+ FD R P+ S + + F LGP C G + + T + + RY
Sbjct: 314 DPEVFDDPDVFDHTRP-PAASRN------LSFGLGPHSCAGQIISRAEATTVFAVLAERY 366
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 64.6 bits (158), Expect = 1e-12
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
D L L + ++E MR P + R A +++ GD+ IP G+ + + +R
Sbjct: 275 DVLDELRTTPESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANR 334
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P + +P+ D HR V F LG C+G+ A + + + +L
Sbjct: 335 DPARFPDPDVLDV---------HRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 64.6 bits (158), Expect = 1e-12
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+Q+ L ++ V++E +R + I R A +++ G TI AG ++ + I ++R
Sbjct: 264 EQIDVLLRDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNR 323
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ + NP+ FD RN +V F G C+G A +++ + + R
Sbjct: 324 DAKAYENPDIFDA---------RRNARHHVGFGHGIHQCLGQNLARAELEIALGGLFAR- 373
Query: 163 KILPGDK-CKSLQDIRFEFGMTMRSL 187
+PG + L ++ + G +
Sbjct: 374 --IPGLRLAVPLDEVPIKAGHDAQGP 397
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 62.6 bits (153), Expect = 6e-12
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 18/146 (12%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
DQL L DLL + ++E +R P+ R +V+ + + + +R
Sbjct: 254 DQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANR 313
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P+ ++ P+ FD + R+P + F G R C+GS A Q++ ++ + R
Sbjct: 314 DPRRYDRPDDFDIE---------RDPVPSMSFGAGMRYCLGSYLARTQLRAAVAALAR-- 362
Query: 163 KILPGDK-CKSLQDIRFEFGMTMRSL 187
LPG + + + ++ R L
Sbjct: 363 --LPGLRLGCASDALAYQPRTMFRGL 386
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 62.3 bits (152), Expect = 6e-12
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQ ++ +L + ++E +R P PV R A + + IP G + + + H
Sbjct: 274 DQWMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAH 333
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R P+++ + ++FD + + + F GP C+G+ A L++ ++ + R
Sbjct: 334 RDPRVFADADRFDITV--------KREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 385
Query: 162 Y 162
Sbjct: 386 L 386
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 61.9 bits (151), Expect = 9e-12
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 17/147 (11%)
Query: 47 DQLQRL----DLLTRVIKETMR-LFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
L +L+ ++E +R A + R A ++Q GD + G + + + G +
Sbjct: 254 QLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGAN 313
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
P+ + NP + DR NP+ ++ F G C GS + I +L++
Sbjct: 314 FDPEHFPNPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
Query: 162 YKILPGDK-CKSLQDIRFEFGMTMRSL 187
+PG + + + R
Sbjct: 366 ---MPGVDLAVPIDQLVWRTRFQRRIP 389
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 61.9 bits (151), Expect = 9e-12
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL L LL ++E +R P R V IPAG ++ + + H
Sbjct: 284 DQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAH 343
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R P+ + +P++FD R+ +G++ F G CIG+ A L+ + + +L R
Sbjct: 344 RTPERFPDPHRFDI---------RRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
Query: 162 Y 162
Sbjct: 395 C 395
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 61.5 bits (150), Expect = 1e-11
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL +L L + ++E R +A I R+A +V GD + A I +
Sbjct: 261 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 320
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ NP++F+ +R P + F G CI A ++ T ST+ ++
Sbjct: 321 RDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQK 373
Query: 162 YKILPGDK-CKSLQDIRFEFGMTMRSL 187
P K L I + +
Sbjct: 374 ---FPDLKVAVPLGKINYTPLNRDVGI 397
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 61.5 bits (150), Expect = 1e-11
Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 12/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+ + L DL+ E MR +P ++R+A +V TI G + + +
Sbjct: 255 EDQRLLRERPDLIPAAADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNL 313
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P + P + DR P + +G C+G+ A +++ + L
Sbjct: 314 DPASFEAPEEVRFDR-------GLAPIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGM 366
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 61.1 bits (149), Expect = 1e-11
Identities = 30/147 (20%), Positives = 51/147 (34%), Gaps = 18/147 (12%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
+Q+ R + E +R R A ++ I G S+ + +
Sbjct: 257 EQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAAN 316
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R P L + ++ D R P +V F G C+G+ A L+++T + + RR
Sbjct: 317 RDPALAPDVDRLDV---------TREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRR 367
Query: 162 YKILPGDK-CKSLQDIRFEFGMTMRSL 187
P + QD F L
Sbjct: 368 ---FPALRLADPAQDTEFRLTTPAYGL 391
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 61.1 bits (149), Expect = 2e-11
Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 24/150 (16%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQ + L L++ ++E +R P + R +V TIPAG + + + +
Sbjct: 257 DQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAAN 316
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R P++ D R+ SG V F G C+G++ A L+ + I +
Sbjct: 317 RDADWMPEPDRLDIT---------RDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFAD 367
Query: 162 YKIL----PGDKCKSLQDIRFEFGMTMRSL 187
L D ++ + +R L
Sbjct: 368 RPELALAVGLD------ELVYRESTLVRGL 391
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 61.1 bits (149), Expect = 2e-11
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 46 YDQLQRL---DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
++ QR+ +L + I+E +R P R V+ GD TI G + ++I +R
Sbjct: 228 FNLWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANR 287
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+++++ +F PD RNP+ ++ F G C+G+ A L+ + I +R+
Sbjct: 288 DEEVFHDGEKFIPD---------RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 61.1 bits (149), Expect = 2e-11
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+ +RL +L+ + E +R + A + R EV GD T+ G + ++ R
Sbjct: 253 ELRRRLIAHPELIPNAVDELLRFYGPAM-VGRLVTQEVTVGDITMKPGQTAMLWFPIASR 311
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+++P+ R P+ ++ G C+G+ ++ + I+ L+R
Sbjct: 312 DRSAFDSPDNIVI---------ERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRI 362
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 60.7 bits (148), Expect = 2e-11
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
+ L+ + L+ + E +R + R A +++ +I G + + I
Sbjct: 275 EALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSAL 334
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R +++ P+ FD R+ S + + GP C G A L+ + + TI RR
Sbjct: 335 RDGTVFSRPDVFDV---------RRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRR 385
Query: 162 Y 162
+
Sbjct: 386 F 386
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 60.7 bits (148), Expect = 2e-11
Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
+QL + ++E +R F A V +R A +V+ G +I AG + + + +
Sbjct: 266 EQLTVVKANPGRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSAN 325
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
P ++ +P D R ++ F GP C+G A ++++ T+ RR
Sbjct: 326 WDPAVFKDPAVLDV---------ERGARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
Query: 162 YKILPGDK-CKSLQDIRFEFGMTMRSL 187
+P + ++D+ F+ + +
Sbjct: 377 ---IPSLRLAVPMEDVPFKGDSVIYGV 400
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 60.3 bits (147), Expect = 3e-11
Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
DQ L LL I+E +R + R + + + AG + + +
Sbjct: 251 DQWDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANF 310
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
++ P +FD RNP+ ++ F G C+G++ A L++ +LRR
Sbjct: 311 DEAVFCEPEKFDV---------QRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRL 361
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 60.3 bits (147), Expect = 3e-11
Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 29/153 (18%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAA--PVIARSAPYEVQCGDYTIPAGASIAIFIYGL 100
DQ D++ R ++E +R A + R A +++ G TI AG + +
Sbjct: 262 DQRAAALADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLP 321
Query: 101 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160
+ + + P +FD R P+ ++ F G CIG+ A L+++T + +
Sbjct: 322 NFDERAFTGPEEFDA---------ARTPNPHLTFGHGIWHCIGAPLARLELRTMFTKLFT 372
Query: 161 RYKILPGDKCKSL------QDIRFEFGMTMRSL 187
R LP L + +R + G
Sbjct: 373 R---LPE-----LRPELPVEQLRLKEGQLSGGF 397
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 60.3 bits (147), Expect = 3e-11
Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
+ L DL+ + E +R+ A + R A +++ T+PA + + G +
Sbjct: 270 ELPAELRKDPDLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGAN 329
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
P+ +++P + D HR + +V F G C+G A L+++ + T+LRR
Sbjct: 330 HDPEQFDDPERVDF---------HRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
Query: 162 YKILPGDK-CKSLQDIRFEFGMTMRSL 187
+P + + + L
Sbjct: 381 ---VPTLRLAGERDQVVVKHDSATFGL 404
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 59.9 bits (146), Expect = 4e-11
Identities = 26/147 (17%), Positives = 61/147 (41%), Gaps = 18/147 (12%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
+Q L L+ ++E +R A + R A +++ I AG + + +
Sbjct: 265 EQYAALRADRSLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIAN 324
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R ++ +P+ D HR+ ++ F G C+G A L+++ ++ ++ R
Sbjct: 325 RDGTVYEDPDALDI---------HRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
Query: 162 YKILPGDK-CKSLQDIRFEFGMTMRSL 187
+P + ++ + G T++ +
Sbjct: 376 ---VPTLRLAVPVEQLVLRPGTTIQGV 399
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 59.6 bits (145), Expect = 5e-11
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 19/148 (12%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAP--VIARSAPYEVQCGDYTIPAGASIAIFIYGL 100
+ ++L +L+ ++E R P R A +V TI AG +
Sbjct: 275 ELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAA 334
Query: 101 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160
+R + + ++ D R P+ ++ F G C+G+ A ++++ + +L+
Sbjct: 335 NRDQAQFPDADRIDV---------DRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQ 385
Query: 161 RYKILPGDK-CKSLQDIRFEFGMTMRSL 187
R LPG + +R+ GM +R
Sbjct: 386 R---LPGIRLGIPETQLRWSEGMLLRGP 410
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 59.6 bits (145), Expect = 5e-11
Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
L L + V++E +R A + R +V +P+G + ++ +R
Sbjct: 275 GLLTALRDGSADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANR 334
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P +++P+ F P R P+ ++ F G C+GS A +++ + + R
Sbjct: 335 DPAEFDDPDTFLPG---------RKPNRHITFGHGMHHCLGSALARIELSVVLRVLAERV 385
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 59.6 bits (145), Expect = 5e-11
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
Q++ L + RV+ E +R P R A +V I AG + I +
Sbjct: 266 GQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMAN 325
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R L +P+ D +R V F G C+G+ A ++ T+ RR
Sbjct: 326 RDEALTPDPDVLDA---------NRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRR 376
Query: 162 Y 162
+
Sbjct: 377 F 377
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 59.5 bits (145), Expect = 5e-11
Identities = 22/119 (18%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 46 YDQLQRL--DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRH 103
Y+ + + ++E +R P R +V+ D I G + ++I +R
Sbjct: 229 YNSWDYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRD 288
Query: 104 PQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+++ +P+ F P R P+ ++ F G C+G+ A L+ + + +++
Sbjct: 289 EEVFKDPDSFIP---------DRTPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKF 338
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 59.5 bits (145), Expect = 6e-11
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQL L L+ ++E +R R A +V+ G I G + +
Sbjct: 258 DQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAAD 317
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
P P +FD R P+ ++ F G CIG + A ++++ T+ RR
Sbjct: 318 FDPAFVEEPERFDI---------TRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR 368
Query: 162 YKILPGDK-CKSLQDIRFEFGMTMRSL 187
LPG + K ++++RF M +
Sbjct: 369 ---LPGLRLAKPVEELRFRHDMVFYGV 392
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 58.8 bits (143), Expect = 1e-10
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPV--IARSAPYEVQCGDYTIPAGASIAIFIYGL 100
+ +RL ++ R I E +R P ++R A +V+ I AG ++ +
Sbjct: 262 ELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAA 321
Query: 101 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160
+R P+++ +P++ D R+P+ +V F GP C G A L+ + + +L
Sbjct: 322 NRDPEVFPDPDRIDF---------ERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLD 372
Query: 161 RYKILPGDK-CKSLQDIRFEFGMTMRSL 187
R +PG K + +D+ F+ G +R
Sbjct: 373 R---VPGLKLAVAPEDVPFKKGALIRGP 397
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 58.8 bits (143), Expect = 1e-10
Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 29/153 (18%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIA--RSAPYEVQCGDYTIPAGASIAIFIYGL 100
+ + R+ + E +R + R A +V+ I AG + +
Sbjct: 265 ELMARMRERPGARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAA 324
Query: 101 HRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160
+R P ++ +P++ D R+P+ ++ + G C G+ A +Q + + T+L
Sbjct: 325 NRDPDVFPDPDRIDL---------DRDPNPHLAYGNGHHFCTGAVLARMQTELLVDTLLE 375
Query: 161 RYKILPGDKCKSL------QDIRFEFGMTMRSL 187
R LPG L + + + +R
Sbjct: 376 R---LPG-----LRLAVPAEQVAWRRKTMIRGP 400
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 58.5 bits (142), Expect = 1e-10
Identities = 20/121 (16%), Positives = 35/121 (28%), Gaps = 16/121 (13%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
+ Q L + + +E +R F V R + + + G I +
Sbjct: 270 EHRQELIERPERIPAACEELLRRFS--LVADGRILTSDYEFHGVQLKKGDQILLPQMLSG 327
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
+ P D R + F G C+G A ++ T+ L R
Sbjct: 328 LDERENACPMHVDFS---------RQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTR 378
Query: 162 Y 162
Sbjct: 379 I 379
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 58.1 bits (141), Expect = 2e-10
Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 14/120 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+ + + L R ++E R F AR +++ + G I +
Sbjct: 277 ETVAEMRREPLKLQRGVEELFRRFAVVS-DARYVVSDMEFHGTMLKEGDLILLPTALHGL 335
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
+ ++P D R + F+ GP C G A L++ + L R
Sbjct: 336 DDRHHDDPMTVDL---------SRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARI 386
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 57.7 bits (140), Expect = 3e-10
Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 17/123 (13%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSA--PYEVQCGDYTIPAGASIAIFIYG 99
DQL + V++ET+R + R A + G TI G I
Sbjct: 263 DQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDG-RTIARGEPILASYAA 321
Query: 100 LHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTIL 159
+RHP + + FD R ++ F G C+G+ A +++ + ++
Sbjct: 322 ANRHPDWHEDADTFDA---------TRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLF 372
Query: 160 RRY 162
R+
Sbjct: 373 GRF 375
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 57.3 bits (139), Expect = 3e-10
Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 14/120 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+ + L L R +E R FP AR + + + G I +
Sbjct: 276 ELVAELRSDPLKLMRGAEEMFRRFPVV-SEARMVAKDQEYKGVFLKRGDMILLPTALHGL 334
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P + D R + F GP C G A +++ T+ L+R
Sbjct: 335 DDAANPEPWKLDF---------SRRSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRI 385
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 56.9 bits (138), Expect = 4e-10
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
+Q + + V++ET+R P + V+ R A +V GD IPAG ++ + L
Sbjct: 263 EQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALG 322
Query: 102 RHPQLWN-NPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILR 160
R + ++FD R S + H + F GP C G+ + ++ + +
Sbjct: 323 RDERAHGPTADRFDLTR--TSGNRH------ISFGHGPHVCPGAALSRMEAGVALPALYA 374
Query: 161 RY 162
R+
Sbjct: 375 RF 376
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 54.9 bits (133), Expect = 2e-09
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 47 DQLQRL----DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
DQ+ L +L+ +E +R R A +V+ I AG + + +
Sbjct: 247 DQMALLREKPELIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATN 306
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRR 161
R P ++FD R + ++ F G CIG+ A LQ++ + ++ R
Sbjct: 307 RAP-----GDRFDI---------TREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGR 352
Query: 162 Y 162
+
Sbjct: 353 F 353
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 54.6 bits (132), Expect = 3e-09
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
+QL L+ R++ E +R R+A + + I G I + +R
Sbjct: 288 EQLALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANR 347
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
++++NP++FD R P+ ++ F G C+G A L+MK +L +
Sbjct: 348 DEEVFSNPDEFDIT---------RFPNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKL 398
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 54.7 bits (132), Expect = 3e-09
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 13/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
D R+ +LL +++E +R R+A + + I AG + + +
Sbjct: 310 DLFARVKADRNLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANH 369
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
P + P +FDP R + ++ F G C+G A L+M+ + +L R
Sbjct: 370 DPAQFPEPRKFDPT---------RPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRV 420
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 53.8 bits (130), Expect = 5e-09
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 47 DQLQRL----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHR 102
DQ +L L+ ++ E +R + R+A + + G TI G + ++ Y +R
Sbjct: 286 DQFAKLKANPALVETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNR 345
Query: 103 HPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
++ + P +F DR P ++ F G C+G++ A +Q++ IL R+
Sbjct: 346 DDEVIDRPEEFIIDR--------PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 52.6 bits (127), Expect = 1e-08
Identities = 22/118 (18%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 47 DQLQRL-DLLTRVIKETMRLF-PAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 104
D + + ++ET+R + P + R A + + I G + +++ +R
Sbjct: 209 DIIDDALKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDE 268
Query: 105 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRY 162
++ P+ F R + H + F +G C+G+ A L+ ++ IL +
Sbjct: 269 TFFDEPDLFKIGR----REMH------LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 52.7 bits (127), Expect = 1e-08
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 47 DQLQRL-----DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLH 101
+Q R L ++E +R + R+ +++ + AG ++++ +
Sbjct: 295 EQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSAN 354
Query: 102 RHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFS-LGPRGCIGSKYAMLQMKTTISTILR 160
R + +P FD RNP+ ++ F G C+G+ A +++ + R
Sbjct: 355 RDESKFADPWTFDLA---------RNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRR 405
Query: 161 RY 162
+
Sbjct: 406 QM 407
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 52.3 bits (126), Expect = 2e-08
Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 47 DQLQRL--DLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHP 104
DQ + E +R R+A + + I G + +F +
Sbjct: 289 DQWELYKKVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDE 348
Query: 105 QLWNNPNQFDPDRFLPSQSSHRNPSGYVPFS-LGPRGCIGSKYAMLQMKTTISTILRRY 162
+++ +P F+ RNP+ +V F G CIG+ A + + + +
Sbjct: 349 EVFQDPFTFNIL---------RNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHM 398
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 44.5 bits (104), Expect = 9e-06
Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 62/225 (27%)
Query: 4 VDFEIQRNHYSQHPYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETM 63
+DFE + Y L E +F + +DV D P S + +++ + + + T+
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-DMPKSILSKEEIDHIIMSKDAVSGTL 65
Query: 64 RLF-----PAAPVIAR-------------SAPYEVQCGDYTIPAGASIAIFIYGLHRHPQ 105
RLF ++ + +P + + P+ + ++I R
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ---PSMMTR-MYIEQRDR--- 118
Query: 106 LWNNPNQFDPDRFLPSQSSHRN---------PSGYVPFSL-GPRGCIGSKYAMLQMKTT- 154
L+N+ F + + P+ V + G G G KT
Sbjct: 119 LYNDNQVFAK-YNVSRLQPYLKLRQALLELRPAKNV--LIDGVLGS-G--------KTWV 166
Query: 155 ISTILRRYKILPGDKCKSLQDIRFEFG---MTMRSLPGNDIRIEP 196
+ YK+ + +F + +++ + +E
Sbjct: 167 ALDVCLSYKVQC----------KMDFKIFWLNLKNCNSPETVLEM 201
Score = 30.6 bits (68), Expect = 0.33
Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 52/220 (23%)
Query: 10 RNHYSQHPY------LEAVESS-----F----RV-----YHELQDVLGDSPDSAPTYDQL 49
R PY L V+++ F ++ + ++ D L + + + D
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 50 QRLDLLTRVIKETMRLFPAAPVIARSA---PYEVQCGDYTIPAGASIAIFIYGLHRHPQL 106
LT E L + P EV T P ++I +
Sbjct: 295 S--MTLTP--DEVKSLL--LKYLDCRPQDLPREV-LT--TNPR--RLSIIAESIRDGLAT 343
Query: 107 WNNPNQFDPDRFLPSQSS---HRNPSG----YVPFSLGPRGC-IGSK-YAML--QMKTT- 154
W+N + D+ S P+ + S+ P I + +++ + +
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD 403
Query: 155 ---ISTILRRYKILPGDKCK---SLQDIRFEFGMTMRSLP 188
+ L +Y ++ + S+ I E + + +
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY 443
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 42.2 bits (98), Expect = 2e-05
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 20/45 (44%)
Query: 19 LEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETM 63
L+ +++S ++Y + DSAP L IK TM
Sbjct: 22 LKKLQASLKLY---------ADDSAPA---------LA--IKATM 46
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex,
oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus
horikoshii}
Length = 382
Score = 28.7 bits (65), Expect = 1.3
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 35 VLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPA 68
+ G + PTYD + L V ++ PA
Sbjct: 261 IGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPA 294
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme,
electron transfer, folate-ME enzyme, oxidoreductase;
HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia}
PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B*
3ada_B*
Length = 405
Score = 28.0 bits (63), Expect = 2.2
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 35 VLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPA 68
V+G DS Y Q ++ + + LFP
Sbjct: 282 VMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPI 315
>3va9_A Sensor histidine kinase; four-alpha-helix bundle, histidine kinase
family 9, phosphotransfer, transferase two-component
system; 2.30A {Rhodopseudomonas palustris}
Length = 164
Score = 27.3 bits (60), Expect = 2.3
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 17 PYLEAVESSFRVYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIA 73
Y+ A ++ L+ VL D+P +Q+ +D L + R+ V+
Sbjct: 52 SYIRARDALAARLDGLRAVLADNP------EQIAHIDELRLLTDM--RMAQLGRVVE 100
>2cb4_A Mosquitocidal toxin; ADP-ribosyltransferase; 2.50A {Bacillus
sphaericus} PDB: 2cb6_A
Length = 291
Score = 27.6 bits (60), Expect = 2.5
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 95 IFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSGYVPFSLGPRGCIGSKYAMLQMKTT 154
IF+ G P++ N D L + +PS +V + +G + +
Sbjct: 89 IFLNGFI--PRVTNQNLSPVEDTHLLNYLRTNSPSIFVSTTRARYNNLGLEITPWTPHSA 146
Query: 155 ISTILRRYKI 164
+ I+ RY+I
Sbjct: 147 NNNIIYRYEI 156
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET:
FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A*
2q6u_A*
Length = 397
Score = 27.0 bits (60), Expect = 3.8
Identities = 9/81 (11%), Positives = 19/81 (23%), Gaps = 21/81 (25%)
Query: 8 IQRNHYSQHPYLEAVESSFRVYHELQDVLGDS------------PDSAPTYDQL------ 49
R Y+Q + ++ L+ D Q+
Sbjct: 51 HWRLQYTQEDLFRLTLETLPLWRALESRCERRLIHEIGSLWFGDTDVVTNEGQISGTAAM 110
Query: 50 -QRLDLLTRVI--KETMRLFP 67
+L + + + R F
Sbjct: 111 MDKLSVRYEWLKATDIERRFG 131
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 26.9 bits (59), Expect = 5.8
Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 76/196 (38%)
Query: 34 DVLGDSPDS---APTY---------DQLQRLDLLTRVIKETMRLFPAAPVIARS---APY 78
+L DS ++ P+ +Q+Q + +T PA + S
Sbjct: 322 SILEDSLENNEGVPSPMLSISNLTQEQVQDY------VNKTNSHLPAGKQVEISLVNGAK 375
Query: 79 E-VQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFD----P---------DRFLP-SQS 123
V G P + +YGL+ + P+ D P +RFLP +
Sbjct: 376 NLVVSG----PPQS-----LYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVA-- 424
Query: 124 SHRNPSGYVPFSLGPRGCIGSKYAMLQMKTTISTILRRYKILPGDKCK-SLQDIRF---- 178
PF S + I + L + + +DI+
Sbjct: 425 --------SPFH--------SHL----LVPASDLINKD---LVKNNVSFNAKDIQIPVYD 461
Query: 179 -EFGMTMRSLPGNDIR 193
G +R L G+
Sbjct: 462 TFDGSDLRVLSGSISE 477
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics,
D-alanyl-lipoteichoic acid biosynthesis structure
initiative, PSI-2; 2.24A {Streptococcus pneumoniae}
Length = 407
Score = 26.5 bits (58), Expect = 6.8
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 115 PDRFLPSQSSHRNPSGYVPFSLGPRGC 141
D P+ + + Y P+ LG G
Sbjct: 55 FDGAHPAVLAEKYNRSYRPYLLGQGGA 81
>1vq0_A 33 kDa chaperonin; TM1394, joint center for structural genomics,
protein structure initiative, PSI, chaperone; HET: UNL;
2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1
Length = 302
Score = 26.1 bits (58), Expect = 8.4
Identities = 7/41 (17%), Positives = 19/41 (46%)
Query: 31 ELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV 71
++ + + P + + + + LD+L R+ E + A +
Sbjct: 199 MIEKNIKNLPSISKLFQEAEPLDVLERIFGEKVGFVETAEI 239
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.139 0.430
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,168,141
Number of extensions: 178683
Number of successful extensions: 488
Number of sequences better than 10.0: 1
Number of HSP's gapped: 394
Number of HSP's successfully gapped: 91
Length of query: 197
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 108
Effective length of database: 4,216,824
Effective search space: 455416992
Effective search space used: 455416992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (24.9 bits)