BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1672
(600 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C192|LRC4B_MOUSE Leucine-rich repeat-containing protein 4B OS=Mus musculus GN=Lrrc4b
PE=1 SV=1
Length = 709
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 179/416 (43%), Gaps = 90/416 (21%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAG 73
+SCP+ C C + + + C + L +P + T+ L++ N++Q++ + F+
Sbjct: 56 ATSCPAACSCSNQASR--VICTRRELAEVPASIPVN-TRYLNLQENSIQVIRTDTFKH-- 110
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L +L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L N
Sbjct: 111 LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN 170
Query: 134 PISKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKS-------------------- 172
PI I AF VP L +LD+ E RLE+IS AF G +
Sbjct: 171 PIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTAL 230
Query: 173 --LESIKLNGNRLS-------------------HFPVRSVE------------------- 192
LE ++L+GNRL H V ++E
Sbjct: 231 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 290
Query: 193 ----------PLLKLMMIELHDNPWVCDCNMRSIKMWLADK--KNVPVQPACTGPERLSG 240
PL +L + L+ NPW C+C++ + WL + N C P L G
Sbjct: 291 LMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKG 350
Query: 241 KVFSDLHADDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNN 298
+ +L F C P I + A + CR + +++W NG L+
Sbjct: 351 RYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLM--- 406
Query: 299 TAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
T S RI V+ G +L TN D+G++ C+ N AG A+ TL V+
Sbjct: 407 THGSYRVRISVLHDG------TLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS 456
>sp|P0CC10|LRC4B_RAT Leucine-rich repeat-containing protein 4B OS=Rattus norvegicus
GN=Lrrc4b PE=1 SV=1
Length = 709
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 179/416 (43%), Gaps = 90/416 (21%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAG 73
+SCP+ C C + + + C + L +P + T+ L++ N++Q++ + F+
Sbjct: 56 ATSCPAACSCSNQASR--VICTRRELAEVPASIPVN-TRYLNLQENSIQVIRTDTFKH-- 110
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L +L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L N
Sbjct: 111 LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN 170
Query: 134 PISKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKS-------------------- 172
PI I AF VP L +LD+ E RLE+IS AF G +
Sbjct: 171 PIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTAL 230
Query: 173 --LESIKLNGNRLS-------------------HFPVRSVE------------------- 192
LE ++L+GNRL H V ++E
Sbjct: 231 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 290
Query: 193 ----------PLLKLMMIELHDNPWVCDCNMRSIKMWLADK--KNVPVQPACTGPERLSG 240
PL +L + L+ NPW C+C++ + WL + N C P L G
Sbjct: 291 LMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKG 350
Query: 241 KVFSDLHADDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNN 298
+ +L F C P I + A + CR + +++W NG L+
Sbjct: 351 RYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLM--- 406
Query: 299 TAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
T S RI V+ G +L TN D+G++ C+ N AG A+ TL V+
Sbjct: 407 THGSYRVRISVLHDG------TLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS 456
>sp|Q9HCJ2|LRC4C_HUMAN Leucine-rich repeat-containing protein 4C OS=Homo sapiens GN=LRRC4C
PE=1 SV=1
Length = 640
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 174/421 (41%), Gaps = 94/421 (22%)
Query: 11 VVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFR 70
+V +CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+
Sbjct: 41 LVRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTN-TRLLNLHENQIQIIKVNSFK 97
Query: 71 RAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT------------------ 112
L +L+ L L+R HI I+ GA +GL NL ++L DN LT
Sbjct: 98 H--LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 155
Query: 113 ------SIPSLTFQSVRFLR---------------------------------------- 126
SIPS F + LR
Sbjct: 156 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 215
Query: 127 -------DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLN 179
+L+L+ N +S I G+FQ + L KL M +S+++ I AF +SL I L
Sbjct: 216 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 275
Query: 180 GNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADK--KNVPVQPACTGPER 237
N L+ P PL L I LH NPW C+C++ + W+ D N C P
Sbjct: 276 HNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPN 335
Query: 238 LSGKVFSDLHADDFACKPEIRM----DSRYVEAVSSENATVVCRVDSIPPAAISWYWNGR 293
L G+ +L + F C + + D E +++E + CR S ++SW
Sbjct: 336 LKGRYIGELDQNYFTCYAPVIVEPPADLNVTEGMAAE---LKCRA-STSLTSVSWITPNG 391
Query: 294 LLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
++ + A+ RI V+ G +L TN D+G + C+ N G A+ TL V
Sbjct: 392 TVMTHGAYKV--RIAVLSDG------TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNV 443
Query: 354 T 354
T
Sbjct: 444 T 444
>sp|Q8C031|LRC4C_MOUSE Leucine-rich repeat-containing protein 4C OS=Mus musculus GN=Lrrc4c
PE=1 SV=2
Length = 640
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 174/421 (41%), Gaps = 94/421 (22%)
Query: 11 VVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFR 70
+V +CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+
Sbjct: 41 LVRAQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTN-TRLLNLHENQIQIIKVNSFK 97
Query: 71 RAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT------------------ 112
L +L+ L L+R HI I+ GA +GL NL ++L DN LT
Sbjct: 98 H--LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 155
Query: 113 ------SIPSLTFQSVRFLR---------------------------------------- 126
SIPS F + LR
Sbjct: 156 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 215
Query: 127 -------DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLN 179
+L+L+ N +S I G+FQ + L KL M +S+++ I AF +SL I L
Sbjct: 216 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 275
Query: 180 GNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADK--KNVPVQPACTGPER 237
N L+ P PL L I LH NPW C+C++ + W+ D N C P
Sbjct: 276 HNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPN 335
Query: 238 LSGKVFSDLHADDFACKPEIRM----DSRYVEAVSSENATVVCRVDSIPPAAISWYWNGR 293
L G+ +L + F C + + D E +++E + CR S ++SW
Sbjct: 336 LKGRYIGELDQNYFTCYAPVIVEPPADLNVTEGMAAE---LKCRA-STSLTSVSWITPNG 391
Query: 294 LLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
++ + A+ RI V+ G +L TN D+G + C+ N G A+ TL V
Sbjct: 392 TVMTHGAYKV--RIAVLSDG------TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNV 443
Query: 354 T 354
T
Sbjct: 444 T 444
>sp|Q9NT99|LRC4B_HUMAN Leucine-rich repeat-containing protein 4B OS=Homo sapiens GN=LRRC4B
PE=2 SV=3
Length = 713
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 177/416 (42%), Gaps = 90/416 (21%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAG 73
+SCP C C + + + C + L +P + T+ L++ N +Q++ + F+
Sbjct: 54 ATSCPVACSCSNQASR--VICTRRDLAEVPASIPVN-TRYLNLQENGIQVIRTDTFKH-- 108
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L +L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L N
Sbjct: 109 LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN 168
Query: 134 PISKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKS-------------------- 172
PI I AF VP L +LD+ E RLE+IS AF G +
Sbjct: 169 PIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTAL 228
Query: 173 --LESIKLNGNRLS-------------------HFPVRSVE------------------- 192
LE ++L+GNRL H V ++E
Sbjct: 229 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 288
Query: 193 ----------PLLKLMMIELHDNPWVCDCNMRSIKMWLADK--KNVPVQPACTGPERLSG 240
PL +L + L+ NPW C+C++ + WL + N C P L G
Sbjct: 289 LMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKG 348
Query: 241 KVFSDLHADDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNN 298
+ +L F C P I + A + CR + +++W NG L+
Sbjct: 349 RYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLM--- 404
Query: 299 TAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
T S RI V+ G +L TN D+G++ C+ N AG A+ TL V+
Sbjct: 405 THGSYRVRISVLHDG------TLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS 454
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 27/319 (8%)
Query: 12 VSVSSCPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFR 70
+ S+CP+ C C ++C L IP+ P + T+ L+++GNN+ + K F
Sbjct: 29 LGASACPALCTCTGT----TVDCHGTGLQAIPKNIPRN--TERLELNGNNITRIHKNDF- 81
Query: 71 RAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130
AGL L+ L L IG ++ GA D + L + L+ N L +P L FQ+ + L L+L
Sbjct: 82 -AGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDL 140
Query: 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRS 190
+ N I I + AF+ L L + ++++ I AF + LE + LN N ++ PV S
Sbjct: 141 SENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSS 200
Query: 191 VEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADD 250
+ KL LH N CDC++ + WL + + + C+GP L G +++ +
Sbjct: 201 FNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSE 260
Query: 251 FACK--------PEIRMDSRYVEAV-SSENATVVCR---VDSIPPAAISWYWNGRLLLNN 298
F+C P + S A+ + N V CR + +IP RL LN
Sbjct: 261 FSCSGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNG 320
Query: 299 T------AFSSYQRIFVIE 311
AFS Y+++ I+
Sbjct: 321 IKSIPPGAFSPYRKLRRID 339
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C+ +EC L IPE P+S T L ++ N + IL EA
Sbjct: 513 CPHKCRCE----ANVVECSSLKLTKIPERIPQS--TAELRLNNNEISIL--EA------- 557
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+G LT+L +I+LS+N ++ I F+ + +L+L N +
Sbjct: 558 ----------------TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQL 601
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I G F+ + GL L + +R+ I ++FTG +++ + L N+++ + + L
Sbjct: 602 ESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQ 661
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
L + L NP+ C+C + + WL +K V P C P+ L D+ DF C+
Sbjct: 662 SLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 44/276 (15%)
Query: 9 VLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKE 67
+S SCP+ C C ++CR K L IP +T++ L+++G ++ +P
Sbjct: 274 TCTLSSGSCPAMCTCS----NGIVDCRGKGLTAIPANLPETMTEIRLELNG--IKSIPPG 327
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
AF + L+++ L+ I +I A GL +L + L N +T +P F + L+
Sbjct: 328 AF--SPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQL 385
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L L N I+ I AFQ + L L + +++++ ++ FT +++++
Sbjct: 386 LLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT------------ 433
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVF 243
+ L NP++CDCN++ WLAD + P++ + C P RL+ K
Sbjct: 434 ------------LHLAQNPFICDCNLK----WLADFLRTNPIETSGARCASPRRLANKRI 477
Query: 244 SDLHADDFACKPEIRM---DSRYVEAVSSENATVVC 276
+ + F C + + + + S N+ VVC
Sbjct: 478 GQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVC 513
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC++R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP+ + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQGPPTLAVQAKCDLCLSS 932
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 149/319 (46%), Gaps = 27/319 (8%)
Query: 12 VSVSSCPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFR 70
+ ++CP+ C C ++C L IP+ P + T+ L+++GNN+ + K F
Sbjct: 29 LGATACPALCTCTGT----TVDCHGTGLQAIPKNIPRN--TERLELNGNNITRIHKNDF- 81
Query: 71 RAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130
AGL L+ L L IG ++ GA D + L + L+ N L +P L FQ+ + L L+L
Sbjct: 82 -AGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDL 140
Query: 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRS 190
+ N + + + AF+ L L + ++++ I AF + LE + LN N ++ PV S
Sbjct: 141 SENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSS 200
Query: 191 VEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADD 250
+ KL LH N CDC++ + WL + + + C+GP L G +++ +
Sbjct: 201 FNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSE 260
Query: 251 FACK--------PEIRMDSRYVEAV-SSENATVVCR---VDSIPPAAISWYWNGRLLLNN 298
F+C P + S A+ S N V CR + +IP RL LN
Sbjct: 261 FSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPANLPETMTEIRLELNG 320
Query: 299 T------AFSSYQRIFVIE 311
AFS Y+++ I+
Sbjct: 321 IKSIPPGAFSPYRKLRRID 339
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 11 VVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAF 69
S +CP C C+ +EC L IPE P+S T L ++ N + IL EA
Sbjct: 507 CTSDVACPHKCRCE----ASVVECSGLKLSKIPERIPQS--TTELRLNNNEISIL--EA- 557
Query: 70 RRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLN 129
+G L++L +I+LS+N ++ I TF+ + +L+
Sbjct: 558 ----------------------TGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELH 595
Query: 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189
L N + + G F+ + GL L + +R+ I ++FTG +++ + L N ++
Sbjct: 596 LTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPG 655
Query: 190 SVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHAD 249
+ + L L + L NP+ C+C + + WL +K V P C P+ L D+
Sbjct: 656 AFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFP 715
Query: 250 DFACK 254
DF C+
Sbjct: 716 DFRCE 720
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 41/250 (16%)
Query: 9 VLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKE 67
+S SCP+ C C ++CR K L IP +T++ L+++G ++ +P
Sbjct: 274 ACTLSSGSCPAMCSCS----NGIVDCRGKGLTAIPANLPETMTEIRLELNG--IKSIPPG 327
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
AF + L+++ L+ I +I A GL +L + L N +T +P F + L+
Sbjct: 328 AF--SPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQL 385
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L L N I+ I AFQ + L L + +++++ ++ FT +++++
Sbjct: 386 LLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQT------------ 433
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVF 243
+ L NP++CDCN++ WLAD + P++ C P RL+ K
Sbjct: 434 ------------LHLAQNPFICDCNLK----WLADFLRTNPIETTGARCASPRRLANKRI 477
Query: 244 SDLHADDFAC 253
+ + F C
Sbjct: 478 GQIKSKKFRC 487
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC++R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQGPPSLAVQAKCDPCLSS 932
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 151/319 (47%), Gaps = 27/319 (8%)
Query: 12 VSVSSCPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFR 70
+ ++CP+ C C ++C L IP+ P + T+ L+++GNN+ + K F
Sbjct: 29 LGATACPALCTCTGT----TVDCHGTGLQAIPKNIPRN--TERLELNGNNITRIHKNDF- 81
Query: 71 RAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130
AGL L+ L L IG ++ GA D + L + L+ N L +P L FQ+ + L L+L
Sbjct: 82 -AGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDL 140
Query: 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRS 190
+ N + + + AF+ L L + ++R+ I AF + LE + LN N ++ PV S
Sbjct: 141 SENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSS 200
Query: 191 VEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADD 250
+ KL LH N CDC++ + WL + + + C+GP L G +++ +
Sbjct: 201 FNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKGE 260
Query: 251 FACK--------PEIRMDSRYVEAVSSENATVV-CR---VDSIPPAAISWYWNGRLLLNN 298
F+C P + S A+ S ++ +V CR + +IP RL LN
Sbjct: 261 FSCSGQGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLTAIPANLPETMTEIRLELNG 320
Query: 299 T------AFSSYQRIFVIE 311
AFS Y+++ I+
Sbjct: 321 IKSIPPGAFSPYRKLRRID 339
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 9 VLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKE 67
+S SCP+ C C ++CR K L IP +T++ L+++G
Sbjct: 274 ACTLSSGSCPAMCSCS----SGIVDCRGKGLTAIPANLPETMTEIRLELNG--------- 320
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
I I GA L IDLS+N + I FQ +R L
Sbjct: 321 -------------------IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L L N I+ + +G F + L L ++ +++ I P+AF ++L + L N++
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 421
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVF 243
+ L + + L NP++CDCN++ WLAD + P++ C P RL+ K
Sbjct: 422 KGTFTSLRAIQTLHLAQNPFICDCNLK----WLADFLRTNPIETTGARCASPRRLANKRI 477
Query: 244 SDLHADDFAC 253
+ + F C
Sbjct: 478 GQIKSKKFRC 487
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 11 VVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAF 69
S +CP C C+ +EC L IPE P+S T L ++ N + IL EA
Sbjct: 507 CTSDVACPHKCRCE----ASVVECSSLKLSKIPERIPQS--TTELRLNNNEISIL--EA- 557
Query: 70 RRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLN 129
+G L++L +I+LS+N ++ I TF+ + +L+
Sbjct: 558 ----------------------TGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELH 595
Query: 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189
L N + I G F+ + GL L + +R+ I ++FTG +++ + L N ++
Sbjct: 596 LTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPG 655
Query: 190 SVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHAD 249
+ + L L + L NP+ C+C++ + WL +K V P C P+ L D+
Sbjct: 656 AFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFP 715
Query: 250 DFACK 254
DF C+
Sbjct: 716 DFRCE 720
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC +R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQGPPSLAVQAKCDPCLSS 932
>sp|A6NDA9|LRIT2_HUMAN Leucine-rich repeat, immunoglobulin-like domain and transmembrane
domain-containing protein 2 OS=Homo sapiens GN=LRIT2
PE=2 SV=1
Length = 550
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 160/357 (44%), Gaps = 28/357 (7%)
Query: 3 LVIVFFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQ 62
LV+VF + C C C + + ++C L IP E QV + + L
Sbjct: 10 LVLVFLDTHAAQPFCLPGCTCSEESFGRTLQCTSVSLGKIPGNLSEEFKQV-RIENSPLF 68
Query: 63 ILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSV 122
+P+ +F + L+ L+L +I I GAL+ L L E+ L N L S+P F++
Sbjct: 69 EMPQGSF--INMSTLEYLWLNFNNISVIHLGALEHLPELRELRLEGNKLCSVPWTAFRAT 126
Query: 123 RFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNR 182
LR L+L RN I + + A QF+ L LD+S +RL +S F + + +
Sbjct: 127 PLLRVLDLKRNKIDALPELALQFLVSLTYLDLSSNRLTVVSKSVFLNWPAYQKCRQ---- 182
Query: 183 LSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-----QPACTGPER 237
P E +L +++ LHDNPWVCDC +R + ++ +PV C GP
Sbjct: 183 ----PDCGAE-ILSSLVVALHDNPWVCDCRLRGLVQFV-KSITLPVILVNSYLICQGPLS 236
Query: 238 LSGKVFSDLHADDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLL 296
+G++F + AC KP+I S + + +N T+ C + P +I+W + +
Sbjct: 237 KAGQLFHETELS--ACMKPQISTPSANITIRAGQNVTLRCLAQASPSPSIAWTYPLSMWR 294
Query: 297 NNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+S GE S L + A DSG + C+A N G ++ +L V
Sbjct: 295 EFDVLTS-------STGEDTALSELAIPAAHLVDSGNYTCMASNSIGKSNLVISLHV 344
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1
Length = 1527
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 50/333 (15%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C ++ + C L +P+ P+ TQ LD+ N+++ LP AF +GL
Sbjct: 26 CPAGCTCL----ERTVRCIRAKLSAVPKLPQD--TQTLDLRFNHIEELPANAF--SGLAQ 77
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L LFL + + GAL+GLT L + L++N L+ +P+ FQ + L + L N I
Sbjct: 78 LTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPRLEAIFLENNDIW 137
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ G F +P L +L M ++L + + F +L+ ++L+GN +
Sbjct: 138 QLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNLKRLRLDGNAID------------ 185
Query: 197 LMMIELHDNPWVCDCNMRSI-KMWLAD--KKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
C+C + S+ + W D ++ V + C P+ L + FS L F C
Sbjct: 186 ------------CNCGVYSLWRRWHLDVQRQLVSISLTCAAPQMLQNQGFSSLGEHHFKC 233
Query: 254 -KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQ 312
KP+ + + + + E + C V +P I+W ++NT Q + + EQ
Sbjct: 234 AKPQFLVAPQDAQVAAGEQVELSCEVTGLPRPQITW-------MHNT-----QELGLEEQ 281
Query: 313 GEYE--RKSSLVLTNAQESDSGRFYCVAENRAG 343
+ E SL++ +A SD G + C+A N G
Sbjct: 282 AQAEILPSGSLLIRSADTSDMGIYQCIARNEMG 314
>sp|Q9BZR6|RTN4R_HUMAN Reticulon-4 receptor OS=Homo sapiens GN=RTN4R PE=1 SV=1
Length = 473
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
L + LD+S +N Q+ + GL L L L RC + ++ G GL L + L DN
Sbjct: 106 LLEQLDLS-DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 164
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
L ++P TF+ + L L L N IS + + AF+ + L +L + ++R+ H+ P AF
Sbjct: 165 ALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD 224
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQ 229
L ++ L N LS P ++ PL L + L+DNPWVCDC R + WL + +
Sbjct: 225 LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSE 284
Query: 230 PACTGPERLSGKVFSDLHADDF 251
C+ P+RL+G+ L A+D
Sbjct: 285 VPCSLPQRLAGRDLKRLAANDL 306
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE-SRLEH 161
I L N ++ +P+ +F++ R L L L N +++I+ AF + L +LD+S+ ++L
Sbjct: 61 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRS 120
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ P F G L ++ L+ L L L + L DN
Sbjct: 121 VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 164
>sp|Q504C1|LRIT2_DANRE Leucine-rich repeat, immunoglobulin-like domain and transmembrane
domain-containing protein 2 OS=Danio rerio GN=lrit2 PE=2
SV=2
Length = 561
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 158/351 (45%), Gaps = 33/351 (9%)
Query: 1 MYLVIVFFVLVVSVSS-CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGN 59
++ +IVF +L+ +SS C C C + + C + L IP+ +LT++ + +
Sbjct: 6 LFHLIVFCILISHISSECFPGCSCGTDRHGRSLTCMETALTGIPDGLPEDLTKI-RIEKS 64
Query: 60 NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTF 119
L LP+ F L+ L+L I I+ +L+GL NL E+ L N L S+P F
Sbjct: 65 QLSELPEAVFSHVK--ALKHLWLNFNDIAIINIKSLEGLANLTELRLQGNKLRSVPWTAF 122
Query: 120 QSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLN 179
+ L+ L+L N I + + A +F+PGL LD+S ++L IS + F
Sbjct: 123 EETPNLKILDLKHNRIDALPEHALKFLPGLTYLDLSSNQLSVISKDVFLNWP-------- 174
Query: 180 GNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVP------VQPACT 233
L H + +P +++ LHDNPW+CDC + ++ K P C+
Sbjct: 175 ---LYHSENKHEKPSASNVVLALHDNPWLCDCRLGGFIEFI--KSLTPPFILMNSYLTCS 229
Query: 234 GPERLSGKVFSDLHADDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG 292
PE +G+ F ++ D C KP + + A N T+ C + P A I W +
Sbjct: 230 SPELKAGRFFHEV--DLKTCVKPVVSAPVITITAPLGGNVTLTCSASARPEAVIRWIYAL 287
Query: 293 RLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343
++L F R + E S LV+ + +D G + C+A N G
Sbjct: 288 KML---RGF----RDILSHVDEDTISSQLVIPSLHSADRGLYTCIANNFLG 331
>sp|Q9N0E3|RTN4R_MACFA Reticulon-4 receptor OS=Macaca fascicularis GN=RTN4R PE=2 SV=1
Length = 473
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+ LD+S +N Q+ + GL L L L RC + ++ G GL L + L DN L
Sbjct: 108 EQLDLS-DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 166
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
++P TF+ + L L L N IS + + AF+ + L +L + ++R+ H+ P AF
Sbjct: 167 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 226
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
L ++ L N LS P ++ PL L + L+DNPWVCDC R + WL + +
Sbjct: 227 RLMTLYLFRNNLSALPAEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP 286
Query: 232 CTGPERLSGKVFSDLHADDF 251
C+ P+RL+G+ L A+D
Sbjct: 287 CSLPQRLAGRDLKRLAANDL 306
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE-SRLEH 161
I L N ++ +P+ +F++ R L L L N +++I+ AF + L +LD+S+ ++L
Sbjct: 61 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFAGLALLEQLDLSDNAQLRS 120
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ P F G L ++ L+ L L L + L DN
Sbjct: 121 VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 164
>sp|Q3URE9|LIGO2_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Mus musculus GN=Lingo2
PE=2 SV=1
Length = 606
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 158/333 (47%), Gaps = 33/333 (9%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +P S L ++ + +L I +P AF+R L +L+ L + + + + +L
Sbjct: 189 LTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKR--LFHLKNLEIDYWPLLDLMPANSL 246
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + +++ L+++P L F+ + +L LNL+ NPIS IE G F + L +L +
Sbjct: 247 YGL-NLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIV 305
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
++L I P +F G + L + ++ N L L ++ +++NP CDC +
Sbjct: 306 GAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRL-- 363
Query: 216 IKMWLADKK-NVPV---QPACTGPERLSGKVFSDLHADD----FAC-KPEIRMDSRYVEA 266
+WL ++ N+ QP C GP+ + + F D H+ F C KP+IR + +
Sbjct: 364 --LWLLQRQPNLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIR-EKKLQHL 420
Query: 267 VSSENATVV--CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ E TV C D P ISW R + S R V+ G E +
Sbjct: 421 LVDEGQTVQLECNADGDPQPVISWVTPRRRFITT---KSNGRATVLGDGTLEIRF----- 472
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQVTYRG 357
AQ+ DSG + C+A N AG + FT +T +G
Sbjct: 473 -AQDQDSGMYVCIASNAAG--NDTFTASLTVKG 502
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 6 VFFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILP 65
V +L+ S CP+ C C + + + C + L+ IPE E T++LD+S N L+ +
Sbjct: 17 VVLLLMGSTIGCPARCECSAQN--KSVSCHRRRLLAIPEGIPIE-TKILDLSKNRLKSIN 73
Query: 66 KEAFRRAGLL----------------------NLQKLFLARCHIGQIDSGALDGLTNLIE 103
E F LL NL+ L L + + G GL+NL +
Sbjct: 74 PEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTK 133
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+D+S+N + + FQ + L+ L + N + I AF + L +L + + L +
Sbjct: 134 LDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVP 193
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
EA + +SL ++ L +++ PV + + L L +E+
Sbjct: 194 TEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEI 232
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+DLS N L SI F S L +++L+ N I+ +E GAF + L L + +RL+ +
Sbjct: 62 LDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVP 121
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
FTG +L + ++ N++ + L L +E+ DN V
Sbjct: 122 LGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLV 166
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 4/197 (2%)
Query: 48 SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
S LT+ LD+S N + IL F+ L NL+ L + + I A GL +L ++ L
Sbjct: 129 SNLTK-LDISENKIVILLDYMFQ--DLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLE 185
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF 167
LT++P+ +R L L+L I+ + AF+ + L L++ L + P
Sbjct: 186 KCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANS 245
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPW-VCDCNMRSIKMWLADKKNV 226
+L S+ + LS P + + L+ L + L NP + M S + L + V
Sbjct: 246 LYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIV 305
Query: 227 PVQPACTGPERLSGKVF 243
Q P G F
Sbjct: 306 GAQLRTIEPHSFQGLRF 322
>sp|Q7L985|LIGO2_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Homo sapiens GN=LINGO2
PE=1 SV=1
Length = 606
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 156/335 (46%), Gaps = 33/335 (9%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +P S L ++ + +L I +P AF+R L +L+ L + + + + +L
Sbjct: 189 LTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKR--LFHLKHLEIDYWPLLDMMPANSL 246
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + +++ L+++P L F+ + +L LNL+ NPIS IE G F + L +L +
Sbjct: 247 YGL-NLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIV 305
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
++L I P +F G + L + ++ N L L ++ +++NP CDC +
Sbjct: 306 GAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRL-- 363
Query: 216 IKMWLADKKNV----PVQPACTGPERLSGKVFSDLHADD----FAC-KPEIRMDSRYVEA 266
+W+ ++ QP C GP+ + + F D H+ F C KP+IR + +
Sbjct: 364 --LWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIR-EKKLQHL 420
Query: 267 VSSENATVV--CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ E TV C D P ISW R + S R V+ G E +
Sbjct: 421 LVDEGQTVQLECSADGDPQPVISWVTPRRRFITT---KSNGRATVLGDGTLEIRF----- 472
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQVTYRGVG 359
AQ+ DSG + C+A N AG + FT +T +G
Sbjct: 473 -AQDQDSGMYVCIASNAAG--NDTFTASLTVKGFA 504
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 6 VFFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILP 65
V + + S CP+ C C + + + C + LI IPE E T++LD+S N L+ +
Sbjct: 17 VVLIFMGSTIGCPARCECSAQN--KSVSCHRRRLIAIPEGIPIE-TKILDLSKNRLKSVN 73
Query: 66 KEAFRRAGLL----------------------NLQKLFLARCHIGQIDSGALDGLTNLIE 103
E F LL NL+ L L + + G GL+NL +
Sbjct: 74 PEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTK 133
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+D+S+N + + FQ + L+ L + N + I AF + L +L + + L +
Sbjct: 134 LDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVP 193
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
EA + +SL S+ L +++ PV + + L L +E+
Sbjct: 194 TEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEI 232
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+DLS N L S+ F S L +++L+ N I+ +E GAF + L L + +RL+ +
Sbjct: 62 LDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVP 121
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
FTG +L + ++ N++ + L L +E+ DN V
Sbjct: 122 LGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLV 166
Score = 40.4 bits (93), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 4/197 (2%)
Query: 48 SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
S LT+ LD+S N + IL F+ L NL+ L + + I A GL +L ++ L
Sbjct: 129 SNLTK-LDISENKIVILLDYMFQ--DLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLE 185
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF 167
LT++P+ +R L L+L I+ + AF+ + L L++ L + P
Sbjct: 186 KCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANS 245
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPW-VCDCNMRSIKMWLADKKNV 226
+L S+ + LS P + + L+ L + L NP + M S + L + V
Sbjct: 246 LYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIV 305
Query: 227 PVQPACTGPERLSGKVF 243
Q P G F
Sbjct: 306 GAQLRTIEPHSFQGLRF 322
>sp|Q9HBW1|LRRC4_HUMAN Leucine-rich repeat-containing protein 4 OS=Homo sapiens GN=LRRC4
PE=1 SV=2
Length = 653
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 30/334 (8%)
Query: 32 MECRDKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D +L IP L+++ L + N ++ +P AF R +L +L L +
Sbjct: 128 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLMRLDLGELKKLE 185
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL NL ++L + +P+LT + L +L ++ N +I G+F +
Sbjct: 186 YISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLVGLEELEMSGNHFPEIRPGSFHGLSS 243
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + S++ I AF G SL + L N LS P PL L+ + LH NPW
Sbjct: 244 LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFACKPEIRMDS-RY 263
CDC++ + WL ++ +P C G P + G+ ++ F C MD+ R
Sbjct: 304 CDCDILWLAWWL--REYIPTNSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMDAPRD 361
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSS---YQRIFVIEQGEYERKSS 320
+ A + CR P +++ W LL N T S + RI V+ G +
Sbjct: 362 LNISEGRMAELKCRTP--PMSSVKW-----LLPNGTVLSHASRHPRISVLNDG------T 408
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
L ++ SD+G + C+ N AG ++A+ L V+
Sbjct: 409 LNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVS 442
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 8/191 (4%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
+CPS C C + K + C + L +P+ S T+ L++ NN+Q++ + FR L
Sbjct: 45 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSN-TRYLNLMENNIQMIQADTFRH--LH 99
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L R I QI+ GA +GL +L ++L DN LT IPS F+ + LR+L L NPI
Sbjct: 100 HLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPI 159
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L++LD+ E +LE+IS AF G +L+ + L + P ++ PL
Sbjct: 160 ESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPL 217
Query: 195 LKLMMIELHDN 205
+ L +E+ N
Sbjct: 218 VGLEELEMSGN 228
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 126 RDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSH 185
R LNL N I I+ F+ + L L + + + I AF G SL +++L N L+
Sbjct: 78 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV 137
Query: 186 FPVRSVEPLLKLMMIELHDNP 206
P + E L KL + L +NP
Sbjct: 138 IPSGAFEYLSKLRELWLRNNP 158
>sp|Q45R42|LRRC4_RAT Leucine-rich repeat-containing protein 4 OS=Rattus norvegicus
GN=Lrrc4 PE=1 SV=1
Length = 652
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 30/341 (8%)
Query: 32 MECRDKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D +L IP L+++ L + N ++ +P AF R +L +L L +
Sbjct: 127 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLMRLDLGELKKLE 184
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL NL ++L + +P+LT + L +L ++ N +I G+F +
Sbjct: 185 YISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLVGLEELEMSGNHFPEIRPGSFHGLSS 242
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + S++ I AF G SL + L N LS P PL L+ + LH NPW
Sbjct: 243 LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 302
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFACKPEIRMDS-RY 263
CDC++ + WL ++ +P C G P + G+ ++ F C MD+ R
Sbjct: 303 CDCDILWLAWWL--REYIPTNSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMDAPRD 360
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSS---YQRIFVIEQGEYERKSS 320
+ A + CR P +++ W LL N T S + RI V+ G
Sbjct: 361 LNISEDRMAELKCRTP--PMSSVKW-----LLPNGTVLSHASRHPRISVLNDGTLNFSRV 413
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
L++ D+G + C+ N AG ++A+ L V+ + P
Sbjct: 414 LLI------DTGVYTCMVTNVAGNSNASAYLNVSSAELNTP 448
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 8/191 (4%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
+CPS C C + K + C + L +P+ S T+ L++ NN+Q++ + FR L
Sbjct: 44 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSN-TRYLNLMENNIQMIQADTFRH--LH 98
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L R I QI+ GA +GL +L ++L DN LT IPS F+ + LR+L L NPI
Sbjct: 99 HLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPI 158
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L++LD+ E +LE+IS AF G +L+ + L + P ++ PL
Sbjct: 159 ESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPL 216
Query: 195 LKLMMIELHDN 205
+ L +E+ N
Sbjct: 217 VGLEELEMSGN 227
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 126 RDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSH 185
R LNL N I I+ F+ + L L + + + I AF G SL +++L N L+
Sbjct: 77 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTV 136
Query: 186 FPVRSVEPLLKLMMIELHDNP 206
P + E L KL + L +NP
Sbjct: 137 IPSGAFEYLSKLRELWLRNNP 157
>sp|Q99PH1|LRRC4_MOUSE Leucine-rich repeat-containing protein 4 OS=Mus musculus GN=Lrrc4
PE=1 SV=2
Length = 652
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 30/341 (8%)
Query: 32 MECRDKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D +L IP L+++ L + N ++ +P AF R +L +L L +
Sbjct: 127 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLMRLDLGELKKLE 184
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL NL ++L + +P+LT + L +L ++ N +I G+F +
Sbjct: 185 YISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLVGLEELEMSGNHFPEIRPGSFHGLSS 242
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + S++ I AF G SL + L N LS P PL L+ + LH NPW
Sbjct: 243 LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 302
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFACKPEIRMDS-RY 263
CDC++ + WL ++ +P C G P + G+ ++ F C MD+ R
Sbjct: 303 CDCDILWLAWWL--REYIPTNSTCCGRCHAPMHMRGRYLVEVDQAAFQCSAPFIMDAPRD 360
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSS---YQRIFVIEQGEYERKSS 320
+ A + CR P +++ W LL N T S + RI V+ G
Sbjct: 361 LNISEDRMAELKCRTP--PMSSVKW-----LLPNGTVLSHASRHPRISVLNDGTLNFSRV 413
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
L++ D+G + C+ N AG ++A+ L V+ + P
Sbjct: 414 LLI------DTGVYTCMVTNVAGNSNASAYLNVSSAELNTP 448
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 8/191 (4%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
+CPS C C + K + C + L +P+ S T+ L++ NN+Q++ + FR L
Sbjct: 44 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSN-TRYLNLMENNIQMIQADTFRH--LH 98
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L R I QI+ GA +GL +L ++L DN LT IPS F+ + LR+L L NPI
Sbjct: 99 HLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPI 158
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L++LD+ E +LE+IS AF G +L+ + L + P ++ PL
Sbjct: 159 ESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPL 216
Query: 195 LKLMMIELHDN 205
+ L +E+ N
Sbjct: 217 VGLEELEMSGN 227
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 126 RDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSH 185
R LNL N I I+ F+ + L L + + + I AF G SL +++L N L+
Sbjct: 77 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV 136
Query: 186 FPVRSVEPLLKLMMIELHDNP 206
P + E L KL + L +NP
Sbjct: 137 IPSGAFEYLSKLRELWLRNNP 157
>sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn PE=2 SV=1
Length = 1457
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 159/372 (42%), Gaps = 61/372 (16%)
Query: 2 YLVIVFFVLVVSV----SSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMS 57
+L + +LVV++ SCPS C+C + + C L ++P P T +LD+
Sbjct: 7 WLYLTAGLLVVALPQLSHSCPSRCLC----FRTTVRCMHLMLESVPAVPPH--TTILDLR 60
Query: 58 GNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSL 117
N I I +GA L NL + L++N + IPS
Sbjct: 61 FNR--------------------------IKDIQTGAFKHLKNLNTLLLNNNQIKRIPSE 94
Query: 118 TFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIK 177
F+ + L+ L L +N I I++ AF+ + L +L + +++E + PE+F LE +
Sbjct: 95 AFKDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLEPESFNYLPKLERLF 154
Query: 178 LNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD-------KKNVPVQP 230
L+ NR++H + L + + L N CDC + +WLAD N
Sbjct: 155 LHNNRITHLVPGTFSQLESMKRLRLDSNALHCDCEI----LWLADLLKIYSESGNAQAAA 210
Query: 231 ACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWY 289
C P RL G+ S + + C +P I + + V+ CR + P I W
Sbjct: 211 TCEYPRRLQGRSVSTITPSELNCERPRITSEPQDVDVTFGNTVYFTCRAEGNPKPEIIWL 270
Query: 290 WNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANF 349
N N + R+ ++ G +L++ N +E+D G + C+A+N AG
Sbjct: 271 RNN----NELSMKDDSRLNLLNDG------TLMIQNTKETDQGIYQCMAKNVAGEVK--- 317
Query: 350 TLQVTYRGVGLP 361
T +VT R G P
Sbjct: 318 THEVTLRYYGTP 329
>sp|A1KZ92|PXDNL_HUMAN Peroxidasin-like protein OS=Homo sapiens GN=PXDNL PE=1 SV=3
Length = 1463
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 143/337 (42%), Gaps = 54/337 (16%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C+C K + C L IP+ P+ T VLD+ N ++ +P AF++ LN
Sbjct: 24 CPSRCLC----FKSTVRCMHLMLDHIPQVPQQ--TTVLDLRFNRIREIPGSAFKKLKNLN 77
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L HI +I A +GL NL+ + L +N I
Sbjct: 78 TLLLNNN--HIRKISRNAFEGLENLLYL------------------------YLYKNEIH 111
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++K F+ + L L + ++LE + PE F LE + L+ N+LS P S L
Sbjct: 112 ALDKQTFKGLISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDS 171
Query: 197 LMMIELHDNPWVCDCNMRSIKMWL-------ADKKNVPVQPACTGPERLSGKVFSDLHAD 249
L + L N VCDC++ MWL A + C P RL G+ + + +
Sbjct: 172 LKRLRLDSNALVCDCDL----MWLGELLQGFAQHGHTQAAATCEYPRRLHGRAVASVTVE 227
Query: 250 DFACK-PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIF 308
+F C+ P I + + VE S CR + P I W N L R+
Sbjct: 228 EFNCQSPRITFEPQDVEVPSGNTVYFTCRAEGNPKPEIIWIHNNHSL----DLEDDTRLN 283
Query: 309 VIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIA 345
V + G +L++ N +ESD G + C+A N AG A
Sbjct: 284 VFDDG------TLMIRNTRESDQGVYQCMARNSAGEA 314
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 16/87 (18%)
Query: 270 ENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEY--ERKSSLVLTNAQ 327
+N + C P I+W G + + E G++ + + +L + +A
Sbjct: 526 KNINISCHAQGEPQPIITWNKEG--------------VQITESGKFHVDDEGTLTIYDAG 571
Query: 328 ESDSGRFYCVAENRAGIADANFTLQVT 354
D GR+ CVA N G+A N L VT
Sbjct: 572 FPDQGRYECVARNSFGLAVTNMFLTVT 598
>sp|Q5NVQ6|ISLR_PONAB Immunoglobulin superfamily containing leucine-rich repeat protein
OS=Pongo abelii GN=ISLR PE=2 SV=1
Length = 428
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 157/368 (42%), Gaps = 59/368 (16%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
+CP C C K G Q +C + L +P + +T L +S N L LP+ AFR LL
Sbjct: 18 ACPEPCDCGEKYGFQIADCAYRDLEAVPPGFPANVT-ALSLSANRLPGLPEGAFREVPLL 76
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
Q L+LA I + +GAL L++L +DLS NL++ ++ L+
Sbjct: 77 --QSLWLAHNEIRMVAAGALASLSHLKSLDLSHNLISDFAWSDLHNLSALQ--------- 125
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
L+K+D +E L I +AF +L S++LN NRL + PL
Sbjct: 126 -------------LLKMDSNE--LTFIPRDAFRSLHALRSLQLNHNRLHTLAEGTFTPLT 170
Query: 196 KLMMIELHDNPWVCDCNMRSIKMW-LADKKNVPVQP--ACTGPERLSGKVFSDLHADDFA 252
L ++++DNP+ C C + +K W LA ++P Q ACT P L G S L
Sbjct: 171 ALSHLQINDNPFDCTCGIVWLKTWALATAVSIPEQDNIACTSPHVLKGTPLSRL--PPLP 228
Query: 253 CK-PEIRMDSRYVEAVSSENATVV----CRVDSIPPAAISWY----------------WN 291
C P +++ + + + V C VD P + W+ +
Sbjct: 229 CSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHIQIPSGIVEITSPNVGTD 288
Query: 292 GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTL 351
GR L SS R G SL++ + + + G + C+A N G A+++ +
Sbjct: 289 GRALPGTPVASSQPRFQAFANG------SLLIPDFGKLEEGTYSCLATNELGSAESSVDV 342
Query: 352 QVTYRGVG 359
+ G G
Sbjct: 343 ALATPGEG 350
>sp|Q99M75|RTN4R_RAT Reticulon-4 receptor OS=Rattus norvegicus GN=Rtn4r PE=1 SV=2
Length = 473
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 3/203 (1%)
Query: 50 LTQVLDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
L + LD+S N L+++ FR GL +L L L RC + ++ G GL L + L D
Sbjct: 106 LLEQLDLSDNAQLRVVDPTTFR--GLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 163
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N L ++P TF+ + L L L N I + + AF+ + L +L + ++ + + P AF
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV 228
L ++ L N LS P + PL L + L+DNPWVCDC R + WL +
Sbjct: 224 DLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSS 283
Query: 229 QPACTGPERLSGKVFSDLHADDF 251
+ C P+RL+G+ L A D
Sbjct: 284 EVPCNLPQRLAGRDLKRLAASDL 306
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE-SRLEH 161
I L N ++ +P+ +FQS R L L L N ++ I+ AF + L +LD+S+ ++L
Sbjct: 61 RIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRV 120
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ P F G L ++ L+ L L L + L DN
Sbjct: 121 VDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 164
>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2
Length = 1475
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 157/356 (44%), Gaps = 59/356 (16%)
Query: 15 SSCPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAG 73
+ CPS C+C + + C L +P AP+ T +LD+ N ++
Sbjct: 31 AGCPSRCLC----FRTTVRCMHLLLEAVPAVAPQ---TSILDLRFNRIR----------- 72
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+I GA L +L + L++N + IP+ F+ + L+ L L +N
Sbjct: 73 ---------------EIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKN 117
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I I++ AF+ + L +L + +++E + PE+F LE + L+ NR++H +
Sbjct: 118 EIQSIDRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQ 177
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLAD-------KKNVPVQPACTGPERLSGKVFSDL 246
L + + L N CDC + +WLAD N C P R+ G+ + +
Sbjct: 178 LESMKRLRLDSNALHCDCEI----LWLADLLKTYAQSGNAQAAATCEYPRRIQGRSVATI 233
Query: 247 HADDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQ 305
++ C +P I + + + S CR + P I W N N + +
Sbjct: 234 TPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNN----NELSMKTDS 289
Query: 306 RIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
R+ +++ G +L++ N QE+D G + C+A+N AG A T +VT R +G P
Sbjct: 290 RLNLLDDG------TLMIQNTQEADEGVYQCMAKNVAGEAK---TQEVTLRYLGSP 336
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 19/107 (17%)
Query: 271 NATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYE--RKSSLVLTNAQE 328
N + C P AI+W +G + V E G++ + L + +
Sbjct: 538 NVQLPCSSQGEPEPAITWNKDG--------------VQVTESGKFHISPEGFLTINDVGT 583
Query: 329 SDSGRFYCVAENRAGIADANFTLQVTYRGV---GLPFLGGGHINGIS 372
+D+GR+ CVA N G A + L V V G P++ + I+
Sbjct: 584 ADAGRYECVARNTIGYASVSMVLSVNVPDVSRNGDPYVATSIVEAIA 630
>sp|Q52KR2|LRIG2_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Mus musculus GN=Lrig2 PE=2 SV=1
Length = 1054
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 142/322 (44%), Gaps = 34/322 (10%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L++ NNL + K GL LQ+L++++ I +I A + L E+DLS N LT
Sbjct: 267 LELEHNNLTGVNKGWL--YGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTR 324
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLE---HISPEAFTGA 170
+ F + L LNL N ++ I G F+F+ L LD+ + + + EAF+G
Sbjct: 325 LDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGL 384
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP-----------------------W 207
KSL + L GNR+ ++ L L ++L++N
Sbjct: 385 KSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTHLKGLVLNTSSL 444
Query: 208 VCDCNMRSIKMWLADKK-NVPVQPACTGPERLSGKVFSDLHADDFAC----KPEIRMDSR 262
+CDC+++ + WL D + V +C PE L+G+ ++ DF C KP+IR
Sbjct: 445 LCDCHLKWLLQWLVDNNFHHSVNVSCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTHPE 504
Query: 263 YVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSL 321
A+ N T+ C S + +S W +L + ++ R + E S L
Sbjct: 505 STIALRGVNVTLTCTAVSSSDSPMSTIWRKDSEILYDVDIENFVRYRQQDGEALEYTSVL 564
Query: 322 VLTNAQESDSGRFYCVAENRAG 343
L + +D G++ C+ N G
Sbjct: 565 RLFSVNFTDEGKYQCIVTNHFG 586
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L++ N ++I+ F+ GL +L+ L + R I ++ GA GL N+ E++L N L
Sbjct: 217 QFLELKRNRIKIVEGLTFQ--GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNL 274
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T + +R L+ L +++N I KI A++F L +LD+S ++L + AF G
Sbjct: 275 TGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLS 334
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
LE + L NR++H L L ++L +N
Sbjct: 335 LLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNN 368
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 47 ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
ES+ Q + M+ N L +P + N+ L L I +I++ A + + L +DL
Sbjct: 94 ESQTLQEVKMNYNELTEIP---YFGEPTPNITLLSLVHNLIPEINAEAFELYSALESLDL 150
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEA 166
S N+++ I + +F + L+ LNL+ N IS +E G F +
Sbjct: 151 SSNIISEIKTSSFPRMS-LKYLNLSNNRISTLEAGCFDNL-------------------- 189
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ SL +KLN NR+S P + V L L +EL N
Sbjct: 190 ---SDSLLVVKLNRNRISMIPPK-VFKLPHLQFLELKRN 224
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 137/315 (43%), Gaps = 25/315 (7%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRA 72
++CP+ C C ++C L +P P + + LD+ NN+ + K F A
Sbjct: 31 AAACPTKCTCSAAS----VDCHGLGLRAVPRGIPRN--AERLDLDRNNITRITKMDF--A 82
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
GL NL+ L L + I+ GA L L + L+ N L +P L FQS L L+L+
Sbjct: 83 GLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N I I + AF+ V G+ L + + + I AF + LE + LN N +S V S
Sbjct: 143 NQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFA 252
+ K+ + LH N CDC++ + WL ++ + C P L G +D+ ++
Sbjct: 203 HMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYV 262
Query: 253 C------KPEIRMDSRYV-EAVSSENATVVCR---VDSIPPAAISWYWNGRLLLNNT--- 299
C P +S A S N V CR + IP RL N+
Sbjct: 263 CPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSI 322
Query: 300 ---AFSSYQRIFVIE 311
AF+ Y+++ I+
Sbjct: 323 PAGAFTQYKKLKRID 337
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 34/264 (12%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C+ ++C ++ L IP + E T L ++ N++ +L + L N
Sbjct: 505 CPEKCRCEGT----IVDCSNQKLARIP-SHLPEYTTDLRLNDNDISVLEATGIFKK-LPN 558
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+K+ L+ I ++ GA DG + E+ L+ N L ++ F+ + L+ L L N IS
Sbjct: 559 LRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLIS 618
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ F + + L + ++R+ I+P AFT L+
Sbjct: 619 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFT------------------------TLVS 654
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC--- 253
L I L NP+ C+C+M + WL ++ V P C P L D+ DF C
Sbjct: 655 LSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Query: 254 -KPEIRMDSRYVEAVSSENATVVC 276
+ ++ R E + V C
Sbjct: 715 EESSCQLSPRCPEQCTCVETVVRC 738
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 143/351 (40%), Gaps = 56/351 (15%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
SCPS C C ++CR K L IP LP+ G++
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPAN------------------LPE------GIV 310
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
++ L + I I +GA L ID+S N ++ I FQ ++ L L L N I
Sbjct: 311 EIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
++I KG F + L L ++ +++ + F ++L + L N+L PL
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQ 427
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADK-KNVPVQPA---CTGPERLSGKVFSDLHADDF 251
+ + L NP+VCDC+++ WLAD ++ P++ + C+ P RL+ K S + + F
Sbjct: 428 SIQTLHLAQNPFVCDCHLK----WLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKF 483
Query: 252 AC----------KPEIRMDSRYVEAVSSENATVVCRVDSIP--PAAISWYWNGRLLLNNT 299
C E MD E E V C + P+ + Y L LN+
Sbjct: 484 RCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYTTD-LRLNDN 542
Query: 300 AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFT 350
S + + ++ RK +L +E G F + AG+ + T
Sbjct: 543 DISVLEATGIFKKLPNLRKINLSNNRIKEVREGAF----DGAAGVQELMLT 589
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P + R L ++L+ N IS + F + L L +S +RL
Sbjct: 753 DVTELYLEGNHLTAVPK-ELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRL 811
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ P C+ PE ++ ++ F CK
Sbjct: 872 VKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCK 906
>sp|Q6GU68|ISLR_MOUSE Immunoglobulin superfamily containing leucine-rich repeat protein
OS=Mus musculus GN=Islr PE=1 SV=1
Length = 428
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 162/380 (42%), Gaps = 59/380 (15%)
Query: 4 VIVFFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQI 63
++ + VL+ V +CP C C K G Q +C + L +P + +T L +S N L
Sbjct: 6 LLCWAVLLNLVRACPEPCDCGEKYGFQIADCAYRDLEGVPPGFPANVT-TLSLSANRLPG 64
Query: 64 LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVR 123
LP+ AFR LL Q L+LA I + GAL L++L +DLS NLL+ ++
Sbjct: 65 LPEGAFREVPLL--QSLWLAHNEIRSVAIGALAPLSHLKSLDLSHNLLSEFAWSDLHNLS 122
Query: 124 FLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
L+ L+K+D +E L I +AF+ +L S++LN NRL
Sbjct: 123 ALQ----------------------LLKMDSNE--LAFIPRDAFSSLSALRSLQLNHNRL 158
Query: 184 SHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW-LADKKNVPVQP--ACTGPERLSG 240
+ PL L ++++DNP+ C C + K W LA ++P Q ACT P L G
Sbjct: 159 HALAEGTFAPLTALSHLQINDNPFDCTCGIVWFKTWALASAVSIPEQDNIACTTPHVLKG 218
Query: 241 KVFSDLHADDFACK-PEIRMDSRYVEAVSSENATVV----CRVDSIPPAAISWY------ 289
L C P +++ + + + V C VD P + W+
Sbjct: 219 IPLGRL--PPLPCSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPVPQLHWHIHTPGG 276
Query: 290 ----------WNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAE 339
+GR L A S R G SL++ + + + G + C+A
Sbjct: 277 TVEIASPNVGTDGRALPGALATSGQPRFQAFANG------SLLIPDFGKLEEGTYSCLAT 330
Query: 340 NRAGIADANFTLQVTYRGVG 359
N G A+++ + + G G
Sbjct: 331 NELGSAESSVNVALATPGEG 350
>sp|Q9WVC1|SLIT2_RAT Slit homolog 2 protein (Fragment) OS=Rattus norvegicus GN=Slit2
PE=1 SV=3
Length = 766
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 12 VSVSSCPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFR 70
V+ +CP+ C C ++C L +P P + T+ LD++GNN+ + K F
Sbjct: 23 VAPHACPAQCSC----SGSTVDCHGLALRIVPRNIPRN--TERLDLNGNNITRITKTDF- 75
Query: 71 RAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130
AGL +L+ L L I I+ GA L L + L+ N L P L F L L+L
Sbjct: 76 -AGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDL 134
Query: 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRS 190
+ N I I + AF+ + L + +++ I AF + LE + LN N ++ V S
Sbjct: 135 SENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVAS 194
Query: 191 VEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADD 250
+ KL LH N CDC++ + WL + V + C GP L G +++ +
Sbjct: 195 FNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKRE 254
Query: 251 FACKPE 256
F C E
Sbjct: 255 FVCSDE 260
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 54/345 (15%)
Query: 7 FFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPK 66
F SV CP C C ++CR K L IP +T++ + N+++++P
Sbjct: 267 FMAPSCSVLHCPIACTC----SNNIVDCRGKGLTEIPTNLPETITEI-RLEQNSIRVIP- 320
Query: 67 EAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLR 126
GA L +DLS+N ++ + FQ +R L
Sbjct: 321 -------------------------PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLN 355
Query: 127 DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186
L L N I+++ K F+ + L L ++ +++ + +AF +L + L N+L
Sbjct: 356 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTV 415
Query: 187 PVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKV 242
+ L + + L NP++CDC+++ WLAD + P++ + CT P RL+ K
Sbjct: 416 AKGTFSALRAIQTMHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKR 471
Query: 243 FSDLHADDFACKPEIRMDSRYV----------EAVSSENATVVC---RVDSIPPAAISWY 289
+ + F C S+ E E TV C +++ IP
Sbjct: 472 IGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQ-- 529
Query: 290 WNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334
+ L LNN F+ + + ++ RK +L + + G F
Sbjct: 530 YTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAF 574
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 103 EIDLSDNLLTSIPSL-TFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
E+ L++N T + + F+ + LR +NL+ N I+ IE+GAF+ G+ ++ ++ +RLE+
Sbjct: 533 ELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLEN 592
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN---------------- 205
+ + F G +SL+++ L NR+S S L + ++ L+DN
Sbjct: 593 VQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSL 652
Query: 206 --------PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
P+ C+C++ + WL K+ V P C P L D+ DF C
Sbjct: 653 STLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 708
Score = 32.3 bits (72), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 56 MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115
++ N L+ + + F+ GL +L+ L L I + + + GL ++ + L DN +T++
Sbjct: 585 LTSNRLENVQHKMFK--GLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVA 642
Query: 116 SLTFQSVRFLRDLNLARNPIS 136
F ++ L LNL NP +
Sbjct: 643 PGAFGTLHSLSTLNLLANPFN 663
>sp|O14498|ISLR_HUMAN Immunoglobulin superfamily containing leucine-rich repeat protein
OS=Homo sapiens GN=ISLR PE=1 SV=1
Length = 428
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 158/368 (42%), Gaps = 59/368 (16%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
+CP C C K G Q +C + L ++P + +T L +S N L LP+ AFR LL
Sbjct: 18 ACPEPCDCGEKYGFQIADCAYRDLESVPPGFPANVT-TLSLSANRLPGLPEGAFREVPLL 76
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
Q L+LA I + +GAL L++L +DLS NL++ ++ L+
Sbjct: 77 --QSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDLHNLSALQ--------- 125
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
L+K+D +E L I +AF ++L S++LN NRL + PL
Sbjct: 126 -------------LLKMDSNE--LTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLT 170
Query: 196 KLMMIELHDNPWVCDCNMRSIKMW-LADKKNVPVQP--ACTGPERLSGKVFSDLHADDFA 252
L +++++NP+ C C + +K W L ++P Q ACT P L G S L
Sbjct: 171 ALSHLQINENPFDCTCGIVWLKTWALTTAVSIPEQDNIACTSPHVLKGTPLSRL--PPLP 228
Query: 253 CK-PEIRMDSRYVEAVSSENATVV----CRVDSIPPAAISWY----------------WN 291
C P +++ + + + V C VD P + W+ +
Sbjct: 229 CSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHIQIPSGIVEITSPNVGTD 288
Query: 292 GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTL 351
GR L SS R G SL++ + + + G + C+A N G A+++ +
Sbjct: 289 GRALPGTPVASSQPRFQAFANG------SLLIPDFGKLEEGTYSCLATNELGSAESSVDV 342
Query: 352 QVTYRGVG 359
+ G G
Sbjct: 343 ALATPGEG 350
>sp|O94898|LRIG2_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Homo sapiens GN=LRIG2 PE=2 SV=3
Length = 1065
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 140/322 (43%), Gaps = 34/322 (10%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L++ NNL + K GL LQ+L++++ I +I A + L E+DLS N LT
Sbjct: 268 LELEHNNLTRVNKGWL--YGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTR 325
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLE---HISPEAFTGA 170
+ F + L LNL N ++ I G F+F+ L LD+ + + + EAF G
Sbjct: 326 LDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGL 385
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP-----------------------W 207
SL + L GN++ ++ L L ++L++N
Sbjct: 386 TSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNTSSL 445
Query: 208 VCDCNMRSIKMWLADKK-NVPVQPACTGPERLSGKVFSDLHADDFAC----KPEIRMDSR 262
+CDC+++ + WL D V +C PE L+G+ ++ DF C KP+IR
Sbjct: 446 LCDCHLKWLLQWLVDNNFQHSVNVSCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTHPE 505
Query: 263 YVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSL 321
+ A+ N T+ C S + +S W +L + ++ R + E S L
Sbjct: 506 TIIALRGMNVTLTCTAVSSSDSPMSTVWRKDSEILYDVDTENFVRYWQQAGEALEYTSIL 565
Query: 322 VLTNAQESDSGRFYCVAENRAG 343
L N +D G++ C+ N G
Sbjct: 566 HLFNVNFTDEGKYQCIVTNHFG 587
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L++ N ++I+ F+ GL +L+ L + R I ++ GA GL N+ E++L N L
Sbjct: 218 QFLELKRNRIKIVEGLTFQ--GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNL 275
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T + +R L+ L +++N I +I A++F L +LD+S ++L + AF G
Sbjct: 276 TRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLS 335
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
LE + L NR++H L L ++L +N
Sbjct: 336 LLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNN 369
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
V+ ++ N + ++P + F+ L +LQ L L R I ++ GL +L + + N ++
Sbjct: 196 VVKLNRNRMSMIPPKIFK---LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGIS 252
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + + +L L N ++++ KG + L +L +S++ +E ISP+A+ +
Sbjct: 253 KLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQR 312
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
L + L+ N+L+ + L L + L DN
Sbjct: 313 LSELDLSYNQLTRLDESAFVGLSLLERLNLGDN 345
Score = 40.4 bits (93), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 47 ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
ES+ Q + M+ N L +P + N+ L L I +I++ AL L +DL
Sbjct: 95 ESQTLQEVKMNYNELTEIP---YFGEPTSNITLLSLVHNIIPEINAQALQFYPALESLDL 151
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEA 166
S N+++ I + +F ++ L+ LNL+ N I+ +E G F +
Sbjct: 152 SSNIISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFDNL-------------------- 190
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ SL +KLN NR+S P + + L L +EL N
Sbjct: 191 ---SSSLLVVKLNRNRMSMIPPK-IFKLPHLQFLELKRN 225
>sp|O88280|SLIT3_RAT Slit homolog 3 protein OS=Rattus norvegicus GN=Slit3 PE=2 SV=1
Length = 1523
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 120/272 (44%), Gaps = 16/272 (5%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRA 72
++CP+ C C ++C L +P P + + LD+ NN+ + K F
Sbjct: 31 AAACPTKCTCSAAS----VDCHGLGLRAVPRGIPRN--AERLDLDRNNITRITKMDF--T 82
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
GL NL+ L L + I+ GA L L + L+ N L +P L FQS L L+L+
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N I I + AF+ V G+ L + + + I AF + LE + LN N +S V S
Sbjct: 143 NQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFA 252
+ K+ + LH N CDC++ + WL ++ + C P L G +D+ ++
Sbjct: 203 HMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYV 262
Query: 253 C------KPEIRMDSRYV-EAVSSENATVVCR 277
C P +S A S N V CR
Sbjct: 263 CPGPHSEAPACNANSLSCPSACSCSNNIVDCR 294
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 30/238 (12%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C+ ++C ++ L IP + E T L ++ N++ +L + L N
Sbjct: 505 CPEKCRCEGT----IVDCSNQKLSRIP-SHLPEYTTDLRLNDNDIAVLEATGIFKK-LPN 558
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+K+ L+ I ++ GA DG + E+ L+ N L ++ F+ + L+ L L N IS
Sbjct: 559 LRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLIS 618
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ F + + L + ++R+ ISP AFT L+
Sbjct: 619 CVNNDTFAGLSSVRLLSLYDNRITTISPGAFT------------------------TLVS 654
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
L I L NP+ C+C+M + WL ++ V P C P L D+ DF C+
Sbjct: 655 LSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCE 712
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 128/310 (41%), Gaps = 52/310 (16%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
SCPS C C ++CR K L IP LP+ G++
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPAN------------------LPE------GIV 310
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
++ L + I I +GA L ID+S N ++ I FQ ++ L L L N I
Sbjct: 311 EIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
++I KG F + L L ++ +++ + F ++L + L N+L PL
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ 427
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADK-KNVPVQPA---CTGPERLSGKVFSDLHADDF 251
+ + L NP+VCDC+++ WLAD ++ P++ + C+ P RL+ K S + + F
Sbjct: 428 SIQTLHLAQNPFVCDCHLK----WLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKF 483
Query: 252 AC----------KPEIRMDSRYVEAVSSENATVVC---RVDSIPPAAISWYWNGRLLLNN 298
C E MD E E V C ++ IP + + RL N+
Sbjct: 484 RCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPSHLPEYTTDLRLNDND 543
Query: 299 TAFSSYQRIF 308
A IF
Sbjct: 544 IAVLEATGIF 553
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P + R L ++L+ N IS + F + L L +S +RL
Sbjct: 753 DVTELYLEGNHLTAVPK-ELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRL 811
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEW 871
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ P C+ PE ++ ++ F CK
Sbjct: 872 IKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCK 906
>sp|O94813|SLIT2_HUMAN Slit homolog 2 protein OS=Homo sapiens GN=SLIT2 PE=1 SV=1
Length = 1529
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 10/255 (3%)
Query: 1 MYLVIVFFVL-VVSVSSCPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSG 58
+ L +V +L V+ +CP+ C C ++C L ++P P + T+ LD++G
Sbjct: 11 LSLGLVLAILNKVAPQACPAQCSCSGS----TVDCHGLALRSVPRNIPRN--TERLDLNG 64
Query: 59 NNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLT 118
NN+ + K F AGL +L+ L L I I+ GA L L + L+ N L P L
Sbjct: 65 NNITRITKTDF--AGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELL 122
Query: 119 FQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKL 178
F L L+L+ N I I + AF+ + L + +++ I AF + LE + L
Sbjct: 123 FLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTL 182
Query: 179 NGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERL 238
N N ++ V S + KL LH N CDC++ + WL + V + C GP L
Sbjct: 183 NNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHL 242
Query: 239 SGKVFSDLHADDFAC 253
G +++ +F C
Sbjct: 243 RGHNVAEVQKREFVC 257
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 140/353 (39%), Gaps = 62/353 (17%)
Query: 7 FFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPK 66
F SV CP+ C C ++CR K L IP +T++ + N ++++P
Sbjct: 263 FMAPSCSVLHCPAACTCS----NNIVDCRGKGLTEIPTNLPETITEI-RLEQNTIKVIP- 316
Query: 67 EAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLR 126
GA L IDLS+N ++ + FQ +R L
Sbjct: 317 -------------------------PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN 351
Query: 127 DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186
L L N I+++ K F+ + L L ++ +++ + +AF +L + L N+L
Sbjct: 352 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 411
Query: 187 PVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKV 242
+ PL + + L NP++CDC+++ WLAD + P++ + CT P RL+ K
Sbjct: 412 AKGTFSPLRAIQTMHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKR 467
Query: 243 FSDLHADDFACKPEIR------------------MDSRYVEAVSSENATVVC---RVDSI 281
+ + F C + + D E E TV C +++ I
Sbjct: 468 IGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKI 527
Query: 282 PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334
P + L LNN F+ + + ++ RK + + + G F
Sbjct: 528 PEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF 578
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N T +P + + L ++L+ N IS + +F + L+ L +S +RL
Sbjct: 755 DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 813
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I P F G KSL + L+GN +S P + L L + + NP CDCNM+ + W
Sbjct: 814 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDW 873
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + P C GP ++ K+ + F C+
Sbjct: 874 VKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ 908
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 103 EIDLSDNLLTSIPSL-TFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
E+ L++N T + + F+ + LR +N + N I+ IE+GAF+ G+ ++ ++ +RLE+
Sbjct: 537 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 596
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN---------------- 205
+ + F G +SL+++ L NR++ S L + ++ L+DN
Sbjct: 597 VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSL 656
Query: 206 --------PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
P+ C+C + + WL K+ V P C P L D+ DF C
Sbjct: 657 STLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 712
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 56 MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115
++ N L+ + + F+ GL +L+ L L I + + + GL+++ + L DN +T++
Sbjct: 589 LTSNRLENVQHKMFK--GLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 646
Query: 116 SLTFQSVRFLRDLNLARNPIS 136
F ++ L LNL NP +
Sbjct: 647 PGAFDTLHSLSTLNLLANPFN 667
>sp|O55226|CHAD_MOUSE Chondroadherin OS=Mus musculus GN=Chad PE=2 SV=1
Length = 358
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 6/197 (3%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N ++ L AF+ G +L+ L+L+ + + G+LD + NL + L N L+
Sbjct: 150 ILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLS 207
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
S PS +R + +L L+ NP+ I AFQ F L L + + LE S AF+G
Sbjct: 208 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVT 267
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+ + L+ NRL+ P S P L + L +NPW C C +R ++ WL K + P
Sbjct: 268 TLKHVHLDNNRLNQLP--SSFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKASRP-DAT 324
Query: 232 CTGPERLSGKVFSDLHA 248
C+ P + G+ D A
Sbjct: 325 CSSPAKFKGQRIRDTDA 341
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C G Q + C L IP+ SE T++L++ NN +L +FR + N
Sbjct: 22 CPQNCHCH--GDLQHVICDKVGLQKIPKV--SETTKLLNLQRNNFPVLAANSFR--TMPN 75
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C+I ++ +GA GL LI + LS N + + + F + L L L N +S
Sbjct: 76 LVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVS 135
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ +G + L L ++ +++ + AF GAK L + L+ N LS S++ +
Sbjct: 136 ELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVEN 195
Query: 197 LMMIELHDN 205
L L N
Sbjct: 196 LAKFHLDKN 204
>sp|Q6PGX3|LRFN1_DANRE Leucine-rich repeat and fibronectin type III domain-containing
protein 1 OS=Danio rerio GN=lrfn1 PE=2 SV=1
Length = 584
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 171/412 (41%), Gaps = 74/412 (17%)
Query: 5 IVFFVLVVSVSS----CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNN 60
+VF VLV + CP CIC+ + C L+ +P + + + L ++ N
Sbjct: 4 LVFCVLVFGALAKAQLCPGRCICQTISPTLTLLCAKTGLLFVPPTVDRKTVE-LRLTDNF 62
Query: 61 LQILPKEAFRRAGLLNLQKLF---LARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSL 117
+ A RR LN+ L L+R I QI A GL +L + + N L+ I S
Sbjct: 63 IT-----AVRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVINSD 117
Query: 118 TFQSVRFLRDLNLARNPISKIEKGAF-QFVPGLVKLDMSESRLEHISPEAFTGAKSLESI 176
+ + LR L L N I IE+ +F +FV + LD+S + L + EA ++ ++
Sbjct: 118 QLKGLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTL 177
Query: 177 KLNGNRLSHFPVRSVEPLLKLMMIELHD-------------------------------- 204
L+ N + H V + L KL+ +++
Sbjct: 178 TLDHNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTLFQHAQVLSEPKTSSSSRLTVS 237
Query: 205 ---NPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMDS 261
NP C+C + +WL C PE L K F + ++F C+P +
Sbjct: 238 FGGNPLHCNCEL----LWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKH 293
Query: 262 RYVE--AVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ + + + T+ C+ P AI W + +G+L+ NN+ R + + G +
Sbjct: 294 QVTKPYVMEGQGVTLKCKAMGDPDPAIHWRFPDGKLVHNNS------RTILYDNGTLD-- 345
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFL--GGGHI 368
+++T + DSG F CVA N AGIA A V + LP L GH+
Sbjct: 346 --ILITTLK--DSGAFNCVASNAAGIATA----AVHVHMIPLPLLVNNTGHM 389
>sp|Q92626|PXDN_HUMAN Peroxidasin homolog OS=Homo sapiens GN=PXDN PE=1 SV=2
Length = 1479
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 155/356 (43%), Gaps = 59/356 (16%)
Query: 15 SSCPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAG 73
+ CPS C+C + + C L +P AP+ T +LD+ N ++
Sbjct: 34 AGCPSRCLCF----RTTVRCMHLLLEAVPAVAPQ---TSILDLRFNRIR----------- 75
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+I GA L NL + L++N + IPS F+ + L+ L L +N
Sbjct: 76 ---------------EIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKN 120
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I I++ AF+ + L +L + +++E + P++F LE + L+ NR++H +
Sbjct: 121 EIQSIDRQAFKGLASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNH 180
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLAD-------KKNVPVQPACTGPERLSGKVFSDL 246
L + + L N CDC + +WLAD N C P R+ G+ + +
Sbjct: 181 LESMKRLRLDSNTLHCDCEI----LWLADLLKTYAESGNAQAAAICEYPRRIQGRSVATI 236
Query: 247 HADDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQ 305
++ C +P I + + + S CR + P I W N N + +
Sbjct: 237 TPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNN----NELSMKTDS 292
Query: 306 RIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
R+ +++ G +L++ N QE+D G + C+A+N AG T +VT R G P
Sbjct: 293 RLNLLDDG------TLMIQNTQETDQGIYQCMAKNVAGEVK---TQEVTLRYFGSP 339
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 19/107 (17%)
Query: 271 NATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYE--RKSSLVLTNAQE 328
N + C P AI+W +G + V E G++ + L + +
Sbjct: 541 NVQLPCSSQGEPEPAITWNKDG--------------VQVTESGKFHISPEGFLTINDVGP 586
Query: 329 SDSGRFYCVAENRAGIADANFTLQVTYRGV---GLPFLGGGHINGIS 372
+D+GR+ CVA N G A + L V V G PF+ + I+
Sbjct: 587 ADAGRYECVARNTIGSASVSMVLSVNVPDVSRNGDPFVATSIVEAIA 633
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 9/243 (3%)
Query: 12 VSVSSCPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFR 70
V+ +CP+ C C ++C L ++P P + T+ LD++GNN+ + K F
Sbjct: 23 VAPQACPAQCSCSG----STVDCHGLALRSVPRNIPRN--TERLDLNGNNITRITKIDF- 75
Query: 71 RAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130
AGL +L+ L L I I+ GA L L + L+ N L P L F L L+L
Sbjct: 76 -AGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDL 134
Query: 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRS 190
+ N I I + AF+ + L + +++ I AF + LE + LN N ++ V S
Sbjct: 135 SENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVAS 194
Query: 191 VEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADD 250
+ KL LH N CDC++ + WL + V + C GP L G +++ +
Sbjct: 195 FNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKRE 254
Query: 251 FAC 253
F C
Sbjct: 255 FVC 257
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 54/345 (15%)
Query: 7 FFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPK 66
F SV CP+ C C ++CR K L IP +T++ + N+++++P
Sbjct: 263 FMAPSCSVLHCPAACTCS----NNIVDCRGKGLTEIPTNLPETITEI-RLEQNSIRVIP- 316
Query: 67 EAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLR 126
GA L +DLS+N ++ + FQ +R L
Sbjct: 317 -------------------------PGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLN 351
Query: 127 DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186
L L N I+++ K F+ + L L ++ +++ + +AF +L + L N+L
Sbjct: 352 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTV 411
Query: 187 PVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKV 242
+ L + + L NP++CDC+++ WLAD + P++ + CT P RL+ K
Sbjct: 412 AKGTFSALRAIQTMHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKR 467
Query: 243 FSDLHADDFAC----------KPEIRMDSRYVEAVSSENATVVC---RVDSIPPAAISWY 289
+ + F C + D E E TV C R++ IP
Sbjct: 468 IGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPDHIPQ-- 525
Query: 290 WNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334
+ L LNN F+ + + ++ RK + + + G F
Sbjct: 526 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF 570
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N T +P + + L ++L+ N IS + +F + L+ L +S +RL
Sbjct: 747 DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 805
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I P F G KSL + L+GN +S P + L L + + NP CDCNM+ + W
Sbjct: 806 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDW 865
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + P C GP ++ K+ + F C+
Sbjct: 866 VKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ 900
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 103 EIDLSDNLLTSIPSL-TFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
E+ L++N T + + F+ + LR +N + N I+ IE+GAF+ G+ ++ ++ +RLE+
Sbjct: 529 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 588
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN---------------- 205
+ + F G +SL+++ L NR+S S L + ++ L+DN
Sbjct: 589 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSL 648
Query: 206 --------PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
P+ C+C++ + WL K+ V P C P L D+ DF C
Sbjct: 649 STLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 704
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 56 MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115
++ N L+ + + F+ GL +L+ L L I + + + GL ++ + L DN +T++
Sbjct: 581 LTSNRLENVQHKMFK--GLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVA 638
Query: 116 SLTFQSVRFLRDLNLARNPIS 136
F S+ L LNL NP +
Sbjct: 639 PGAFDSLHSLSTLNLLANPFN 659
>sp|O70210|CHAD_RAT Chondroadherin OS=Rattus norvegicus GN=Chad PE=2 SV=1
Length = 358
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N ++ L AF+ G +L+ L+L+ + + G+LD + NL + L N L+
Sbjct: 150 ILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLS 207
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
S PS +R + +L L+ NP+ I AFQ F L L + + LE S AF G
Sbjct: 208 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFAGVT 267
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+ + L NRL+ P S P L + L +NPW C C +R ++ WL K + P
Sbjct: 268 TLKHVHLENNRLNQLP--STFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKTSRP-DAT 324
Query: 232 CTGPERLSGKVFSDLHA 248
C+ P + G+ D A
Sbjct: 325 CSSPAKFKGQRIRDTDA 341
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRA---- 72
CP C C G Q + C L IP+ SE T++L++ NN +L +FR
Sbjct: 22 CPQNCHCH--GDLQHVICDKVGLQKIPKV--SETTKLLNLQRNNFPVLAANSFRTVPNLV 77
Query: 73 ------------------GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI 114
GL L L+L+ I + +GA D LT L + L N ++ +
Sbjct: 78 SLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSEL 137
Query: 115 PSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174
P + L L L N I ++ GAFQ L L +SE+ L + P + ++L
Sbjct: 138 PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLA 197
Query: 175 SIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L+ N+LS +P ++ L + ++L NP
Sbjct: 198 KFHLDRNQLSSYPSAALSKLRVVEELKLSHNP 229
>sp|Q99PI8|RTN4R_MOUSE Reticulon-4 receptor OS=Mus musculus GN=Rtn4r PE=2 SV=1
Length = 473
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 3/203 (1%)
Query: 50 LTQVLDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
L + LD+S N L ++ F GL +L L L RC + ++ G GL L + L D
Sbjct: 106 LLEQLDLSDNAQLHVVDPTTFH--GLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQD 163
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N L ++P TF+ + L L L N I + + AF+ + L +L + ++ + + P AF
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV 228
L ++ L N LS P + PL L + L+DNPWVCDC R + WL +
Sbjct: 224 DLGRLMTLYLFANNLSMLPAEVLMPLRSLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSS 283
Query: 229 QPACTGPERLSGKVFSDLHADDF 251
+ C P+RL+ + L A D
Sbjct: 284 EVPCNLPQRLADRDLKRLAASDL 306
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE-SRLEH 161
I L N ++ +P+ +FQS R L L L N +++I+ AF + L +LD+S+ ++L
Sbjct: 61 RIFLHGNRISHVPAASFQSCRNLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHV 120
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ P F G L ++ L+ L L L + L DN
Sbjct: 121 VDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDN 164
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 9/239 (3%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
+CP+ C C ++C L +P P + + LD+ NN+ + K F AGL
Sbjct: 33 ACPTKCTCSAAS----VDCHGLGLRAVPRGIPRN--AERLDLDRNNITRITKMDF--AGL 84
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
NL+ L L + I+ GA L L + L+ N L +P L FQS L L+L+ N
Sbjct: 85 KNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQ 144
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I I + AF+ + + L + + + I AF + LE + LN N +S V S +
Sbjct: 145 IQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHM 204
Query: 195 LKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
K+ + LH N CDC++ + WL ++ V C P L G +D+ ++ C
Sbjct: 205 PKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVC 263
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 39/252 (15%)
Query: 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
SCPS C C ++CR K L+ IP + ++ + N+++ +P
Sbjct: 279 SCPSPCTCS----NNIVDCRGKGLMEIPANLPEGIVEI-RLEQNSIKAIP---------- 323
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+GA L ID+S N ++ I FQ ++ L L L N I
Sbjct: 324 ----------------AGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
++I KG F + L L ++ +++ + F ++L + L N+L PL
Sbjct: 368 TEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ 427
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADK-KNVPVQPA---CTGPERLSGKVFSDLHADDF 251
+ + L NP+VCDC+++ WLAD ++ P++ + C+ P RL+ K S + + F
Sbjct: 428 SIQTLHLAQNPFVCDCHLK----WLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKF 483
Query: 252 ACKPEIRMDSRY 263
C SR+
Sbjct: 484 RCSGSEDYRSRF 495
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P ++R L ++L+ N IS + F + L L +S +RL
Sbjct: 753 DVTELYLEGNHLTAVPR-ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRL 811
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ P C+ PE ++ ++ F CK
Sbjct: 872 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCK 906
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 34/264 (12%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C+ ++C ++ L+ IP +T L ++ N + +L + L N
Sbjct: 505 CPEKCRCEGT----IVDCSNQKLVRIPSHLPEYVTD-LRLNDNEVSVLEATGIFKK-LPN 558
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+K+ L+ I ++ GA DG ++ E+ L+ N L ++ F+ + L+ L L N I
Sbjct: 559 LRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIG 618
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ F + + L + ++R+ I+P AFT L+
Sbjct: 619 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFT------------------------TLVS 654
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC--- 253
L I L NP+ C+C++ + WL ++ V P C P L D+ DF C
Sbjct: 655 LSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Query: 254 -KPEIRMDSRYVEAVSSENATVVC 276
+ ++ R E + V C
Sbjct: 715 EESSCQLSPRCPEQCTCMETVVRC 738
>sp|A4IIW9|LIGO1_XENTR Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Xenopus tropicalis
GN=lingo1 PE=2 SV=1
Length = 606
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 142/318 (44%), Gaps = 29/318 (9%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L ++P S L + L + N+ ++ +F+R L L+ L +A ++ + S L
Sbjct: 189 LTSVPTEALSHLHGLITLKLRYLNINVIRDYSFKR--LYRLKNLEIAHWPYLDTMTSNGL 246
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ + L+SIP + + + +LR LNL+ NPI+ +E + L + +
Sbjct: 247 YGL-NLTSLSITHSNLSSIPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLV 305
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L+ + ++ N LS S + L + L NP CDC +
Sbjct: 306 GGQLSVVEPYAFRGLNHLKVLNVSSNYLSTLEESSFHSVGNLETLILDKNPLACDCRL-- 363
Query: 216 IKMWLADKK----NVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAV 267
+W+ ++ QP+C+ PE + GK F D L + F C+ D
Sbjct: 364 --LWIFRRRWRLNFSRQQPSCSSPEYVQGKEFKDFPDVLQPNYFTCRRARIQDHSAQVVY 421
Query: 268 SSENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
E TV CR D PP I W + + + S R+ V G E +
Sbjct: 422 VDEGHTVHFFCRADGDPPPTILWQSPRKTFITS---KSNGRLTVFPDGTLEVRY------ 472
Query: 326 AQESDSGRFYCVAENRAG 343
AQ D+G ++C+A N G
Sbjct: 473 AQVQDNGTYHCIASNAGG 490
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Query: 3 LVIVFFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQ 62
L++V +L S S CP C C + + + C K + +PE ++ T++LD+S N ++
Sbjct: 14 LIVVGSILSGSASGCPQRCDCSPQ--DRSVLCHRKRYLDVPEGIPTD-TRLLDLSKNRIK 70
Query: 63 ILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSV 122
L ++ F + L++L L + I+ GA +GL NL + L N L IP F +
Sbjct: 71 ALNQDEF--SAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKLIPLGVFTGL 128
Query: 123 RFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNR 182
L L+++ N I + FQ + L L++ ++ L +IS AF G SLE + L
Sbjct: 129 SNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCN 188
Query: 183 LSHFPVRSVEPLLKLMMIEL 202
L+ P ++ L L+ ++L
Sbjct: 189 LTSVPTEALSHLHGLITLKL 208
>sp|P24014|SLIT_DROME Protein slit OS=Drosophila melanogaster GN=sli PE=1 SV=2
Length = 1504
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 7/245 (2%)
Query: 9 VLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEA 68
V V++ + CP C C ++C + L ++P +++ + L++ GNNL ++ +
Sbjct: 65 VGVITEARCPRVCSCTGLN----VDCSHRGLTSVPRKISADVER-LELQGNNLTVIYETD 119
Query: 69 FRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDL 128
F+R L L+ L L I I+ + L +L + L++N L +IP S L L
Sbjct: 120 FQR--LTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRL 177
Query: 129 NLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188
+++ N I+ + + F+ L L + +++ + AF G LE + LN N L+ P
Sbjct: 178 DISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPH 237
Query: 189 RSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHA 248
L +L + L DNP+ CDC++ + +L + C P +L G+ +DLH
Sbjct: 238 NIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLHD 297
Query: 249 DDFAC 253
+F C
Sbjct: 298 QEFKC 302
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 50/276 (18%)
Query: 15 SSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGL 74
+SCP C C ++CR+K L ++P + T+ L + N + LP ++F +
Sbjct: 317 NSCPHPCRC----ADGIVDCREKSLTSVPVTLPDDTTE-LRLEQNFITELPPKSF--SSF 369
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+++ L+ +I +I AL GL L + L N + +PS F+ + L+ L L N
Sbjct: 370 RRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANE 429
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
IS I K AF+ + L L + ++ ++ ++ F KS+++
Sbjct: 430 ISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKT------------------- 470
Query: 195 LKLMMIELHDNPWVCDCNMRSIKMWLAD--KKNVPVQPA---CTGPERLSGKVFSDLHAD 249
+ L NP++CDCN+R WLAD KN P++ + C P+R+ + L +
Sbjct: 471 -----VHLAKNPFICDCNLR----WLADYLHKN-PIETSGARCESPKRMHRRRIESLREE 520
Query: 250 DFAC---------KPEIRMDSRYVEAVSSENATVVC 276
F C E RMDS E TV C
Sbjct: 521 KFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDC 556
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%)
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI 162
E+ L N + I + +R L L+L+ N I+ + F + L L +S ++L+ +
Sbjct: 770 ELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCL 829
Query: 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD 222
A +G +L + L+GNR+S P S E L L I L NP CDC ++ W+
Sbjct: 830 QRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKWFSDWIKL 889
Query: 223 KKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMD 260
P C PE++ K+ + F C+ +R D
Sbjct: 890 DYVEPGIARCAEPEQMKDKLILSTPSSSFVCRGRVRND 927
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 103 EIDLSDNLLTSIPS-LTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
E+ L+DN L I S F + L L L RN ++ IE AF+ + +L + E++++
Sbjct: 574 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 633
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLA 221
IS + F G L+++ L N++S S E L L + L NP+ C+C++ WL
Sbjct: 634 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLR 693
Query: 222 DKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE 256
K C P ++ DL +F C E
Sbjct: 694 KKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSE 728
>sp|Q9N008|LIGO1_MACFA Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Macaca fascicularis
GN=LINGO1 PE=2 SV=1
Length = 614
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 141/316 (44%), Gaps = 25/316 (7%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 197 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 254
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPIS IE + L ++ +
Sbjct: 255 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 313
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + L + L NP CDC +
Sbjct: 314 GGQLAMVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLW 373
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 374 VFRRRWRLNFNR--QQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVD 431
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L+ + S R+ V G E + AQ
Sbjct: 432 EGHTVQFVCRADGDPPPAILWLSPRKHLV---SAKSNGRLTVFPDGTLEVRY------AQ 482
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 483 VQDNGTYLCIAANAGG 498
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAG 73
+ CP C C + + C K + +PE +E T++LD+ N ++ L ++ F A
Sbjct: 33 ATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--AS 87
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+L++L L + ++ GA + L NL + L N L IP F + L L+++ N
Sbjct: 88 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 147
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I + FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++
Sbjct: 148 KIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSH 207
Query: 194 LLKLMMIEL 202
L L+++ L
Sbjct: 208 LHGLIVLRL 216
>sp|Q50L44|LIGO1_CHICK Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Gallus gallus
GN=LINGO1 PE=2 SV=1
Length = 613
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 146/318 (45%), Gaps = 29/318 (9%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + S L
Sbjct: 196 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTSNCL 253
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LTSIP ++ + + +LR LNL+ NPI IE + L ++ +
Sbjct: 254 YGL-NLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLV 312
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN L+ + + L + L +NP CDC +
Sbjct: 313 GGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRL-- 370
Query: 216 IKMWLADKK---NV-PVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAV 267
+W+ ++ N QP C+ PE + GK F D L + F C+ D + +
Sbjct: 371 --LWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIF 428
Query: 268 SSENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
E TV VCR D PP AI W + L++ + R+ V G E +
Sbjct: 429 VDEGHTVHFVCRADGDPPPAIMWLSPRKHLIST---KTNGRLTVFPDGTLEVRY------ 479
Query: 326 AQESDSGRFYCVAENRAG 343
AQ D+G + C+A N G
Sbjct: 480 AQIQDNGTYLCIASNAGG 497
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 1 MYLVIVFFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNN 60
+ L+++ +L S + CP C C ++ + C K + +PE +E T+ LD+ N
Sbjct: 19 ILLLMLGSILSGSATGCPPRCECS--AQERAVLCHRKRFMVVPEGIPTE-TRQLDLGKNR 75
Query: 61 LQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQ 120
++ L ++ F A +L++L L I I+ GA + L NL + L N L IP F
Sbjct: 76 IKTLNQDEF--ANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT 133
Query: 121 SVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNG 180
+ L L+++ N I + FQ + L L++ ++ L +IS AF+G SLE + L
Sbjct: 134 GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 193
Query: 181 NRLSHFPVRSVEPLLKLMMIEL 202
L+ P ++ L L+++ L
Sbjct: 194 CNLTSIPTEALSHLHGLIVLRL 215
>sp|A4IFA6|ISLR_BOVIN Immunoglobulin superfamily containing leucine-rich repeat protein
OS=Bos taurus GN=ISLR PE=2 SV=1
Length = 428
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 153/370 (41%), Gaps = 59/370 (15%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAG 73
+CP C C K G +C + L +P + +T L +S N L LP AFR
Sbjct: 16 AQACPEPCECGEKYGFHIADCAYRDLQAVPSGFPANVT-TLSLSANQLPSLPGGAFRE-- 72
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+ LQ L+LA I + +GAL L+ L +DLS NL++ S+ L+
Sbjct: 73 VPRLQSLWLAHNEIRSVAAGALASLSQLKSLDLSHNLISDFAWSDLHSLSALQ------- 125
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
L+K+D +E L I +AF ++L S++LN NRL + P
Sbjct: 126 ---------------LLKMDSNE--LTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFAP 168
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMW-LADKKNVPVQP--ACTGPERLSGKVFSDLHADD 250
L L ++++DNP+ C C + K W L ++P Q CT P L G + L
Sbjct: 169 LTALSHLQINDNPFDCTCGIVWFKTWALTTAVSIPEQDNITCTSPHVLKGTRLNRLLP-- 226
Query: 251 FACK-PEIRMDSRYVEAVSSENATVV----CRVDSIPPAAISWY---------------- 289
C P +++ + + + V C VD P + W+
Sbjct: 227 LPCSAPSVQLTYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHIQTPGGTVEITSPNVG 286
Query: 290 WNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANF 349
+GR L A SS R G SL++ + + + G + C+A N G A+++
Sbjct: 287 ADGRALPGVLAASSRPRFQAFANG------SLLIPDFGKLEEGTYSCLATNELGSAESSV 340
Query: 350 TLQVTYRGVG 359
+ + G G
Sbjct: 341 NVALATPGEG 350
>sp|Q96FE5|LIGO1_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Homo sapiens GN=LINGO1
PE=1 SV=2
Length = 620
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 141/316 (44%), Gaps = 25/316 (7%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 203 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 260
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPIS IE + L ++ +
Sbjct: 261 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 319
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + L + L NP CDC +
Sbjct: 320 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLW 379
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 380 VFRRRWRLNFNR--QQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVD 437
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L+ + S R+ V G E + AQ
Sbjct: 438 EGHTVQFVCRADGDPPPAILWLSPRKHLV---SAKSNGRLTVFPDGTLEVRY------AQ 488
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 489 VQDNGTYLCIAANAGG 504
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAG 73
+ CP C C + + C K + +PE +E T++LD+ N ++ L ++ F A
Sbjct: 39 ATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--AS 93
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+L++L L + ++ GA + L NL + L N L IP F + L L+++ N
Sbjct: 94 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 153
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I + FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++
Sbjct: 154 KIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSH 213
Query: 194 LLKLMMIEL 202
L L+++ L
Sbjct: 214 LHGLIVLRL 222
>sp|Q27972|CHAD_BOVIN Chondroadherin OS=Bos taurus GN=CHAD PE=1 SV=1
Length = 361
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N ++ L AF+ G +L+ L+L+ + + GALD + NL + L N L+
Sbjct: 153 ILQLNNNKIRELRSGAFQ--GAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLS 210
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
S PS +R + +L L+ NP+ I AFQ F L L + + LE S AF G
Sbjct: 211 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVT 270
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+ + L NRL P S P L + L +NPW C C +R ++ WL K + P
Sbjct: 271 TLKHVHLENNRLHQLP--SNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSRP-DAT 327
Query: 232 CTGPERLSGKVFSDLHA 248
C P + G+ D A
Sbjct: 328 CASPAKFRGQHIRDTDA 344
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRA---- 72
CP C C Q + C L IP+ SE T++L++ NN +L +FR
Sbjct: 25 CPQNCHCH--SDLQHVICDKVGLQKIPKV--SEKTKLLNLQRNNFPVLATNSFRAMPNLV 80
Query: 73 ------------------GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI 114
GL L L+L+ I + +GA D LT L + L N +T +
Sbjct: 81 SLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTEL 140
Query: 115 PSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174
P + L L L N I ++ GAFQ L L +SE+ L + P A ++L
Sbjct: 141 PRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLA 200
Query: 175 SIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L+ N+LS +P ++ L + ++L NP
Sbjct: 201 KFYLDRNQLSSYPSAALSKLRVVEELKLSHNP 232
>sp|Q9D1T0|LIGO1_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Mus musculus GN=Lingo1
PE=1 SV=1
Length = 614
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 141/316 (44%), Gaps = 25/316 (7%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 197 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 254
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPI IE + L ++ +
Sbjct: 255 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLV 313
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + + L + L NP CDC +
Sbjct: 314 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLW 373
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 374 VFRRRWRLNFNR--QQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRAHIRDRKAQQVFVD 431
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L+ + S R+ V G E + AQ
Sbjct: 432 EGHTVQFVCRADGDPPPAILWLSPRKHLV---SAKSNGRLTVFPDGTLEVRY------AQ 482
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 483 VQDNGTYLCIAANAGG 498
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAG 73
+ CP C C + + C K + +PE +E T++LD+ N ++ L ++ F A
Sbjct: 33 ATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--AS 87
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+L++L L + ++ GA + L NL + L N L IP F + L L+++ N
Sbjct: 88 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 147
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I + FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++
Sbjct: 148 KIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSH 207
Query: 194 LLKLMMIEL 202
L L+++ L
Sbjct: 208 LHGLIVLRL 216
>sp|Q5RDJ4|LIGO1_PONAB Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Pongo abelii GN=LINGO1
PE=2 SV=1
Length = 614
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 141/316 (44%), Gaps = 25/316 (7%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 197 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 254
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPIS IE + L ++ +
Sbjct: 255 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 313
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + L + L NP CDC +
Sbjct: 314 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLW 373
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 374 VFRRRWRLNFNR--QQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVD 431
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L+ + S R+ V G E + AQ
Sbjct: 432 EGHTVQFVCRADGDPPPAILWLSPRKHLV---SAKSNGRLTVFPGGTLEVRY------AQ 482
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 483 VQDNGTYLCIAANAGG 498
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAG 73
+ CP C C + + C K + +PE +E T++LD+ N ++ L ++ F A
Sbjct: 33 ATGCPPRCECS--AQDRAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--AS 87
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+L++L L + ++ GA + L NL + L N L IP F + L L+++ N
Sbjct: 88 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 147
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I + FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++
Sbjct: 148 KIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSH 207
Query: 194 LLKLMMIEL 202
L L+++ L
Sbjct: 208 LHGLIVLRL 216
>sp|Q5R482|LRRN3_PONAB Leucine-rich repeat neuronal protein 3 OS=Pongo abelii GN=LRRN3
PE=2 SV=1
Length = 708
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 133/306 (43%), Gaps = 49/306 (16%)
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+NL+ L +A ++ +I AL GL NL I DN L +P Q V L+ L+L +N
Sbjct: 211 LINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPHAALQKVVNLKFLDLNKN 270
Query: 134 PISKIEKGAFQFV-----------PGLVKLD---------------MSESRLEHISPEAF 167
PI++I +G F + P L+ +D + RL +I P AF
Sbjct: 271 PINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAF 330
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV- 226
LES+ LN N LS ++E L L I +H NP CDC +R I M +K N+
Sbjct: 331 FRLPKLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINM---NKTNIR 387
Query: 227 ---PVQPACTGPERLSGKVFSDLHADDFA--CKPEIRMDSRYVEAVSSENATVV---CRV 278
P C P G+ +H D C P I +S + ++ E + V CR
Sbjct: 388 FMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPES-FPSNLNVEAGSYVSFHCRA 446
Query: 279 DSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCV 337
+ P I W +G+ LL NT + +V +G +L + + G + C+
Sbjct: 447 TAEPQPEIYWITPSGQKLLPNTLTDKF---YVHSEG------TLDINGVTPKEGGLYTCI 497
Query: 338 AENRAG 343
A N G
Sbjct: 498 ATNLVG 503
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 56 MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115
+ N L LP++ + L NLQ+L++ + I GA GL NL+ + L+ N L I
Sbjct: 123 LEENKLTELPEKCL--SELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMIN 180
Query: 116 SLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLES 175
S F ++ L L + NPI +I+ F+ + L L ++ L I A G ++LES
Sbjct: 181 SKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLES 240
Query: 176 IKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
I NRL P +++ ++ L ++L+ NP
Sbjct: 241 ISFYDNRLIKVPHAALQKVVNLKFLDLNKNP 271
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 17 CPSTCICK----WKGGKQWME-----CRDKFLITIPEAPESELTQVLDMSGNNLQILPKE 67
CP C C+ + +ME C D L+T P + TQ+L + N++ K
Sbjct: 29 CPQLCTCEIRPWFTPTSIYMEASTVDCNDLGLLTFPARLPAN-TQILLLQTNDIA---KI 84
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
+ +NL L L++ ++ + + + + L+ + L +N LT +P + L++
Sbjct: 85 EYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQE 144
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L + N +S I GAF + L++L ++ +RL+ I+ + F +LE + + N +
Sbjct: 145 LYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIK 204
Query: 188 VRSVEPLLKLM--------MIELHDNPWVCDCNMRSIKMW 219
+ +PL+ L + E+ DN V N+ SI +
Sbjct: 205 DMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFY 244
>sp|Q8CBC6|LRRN3_MOUSE Leucine-rich repeat neuronal protein 3 OS=Mus musculus GN=Lrrn3
PE=2 SV=1
Length = 707
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 142/331 (42%), Gaps = 50/331 (15%)
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+ L+ L +A ++ +I AL GL NL I DN L+ +P + Q L+ L+L +N
Sbjct: 211 LVKLRSLVIAGINLTEIPDDALAGLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKN 270
Query: 134 PISKIEKGAFQFV-----------PGLVKLD---------------MSESRLEHISPEAF 167
PI++I +G F + P LV +D + RL +I P AF
Sbjct: 271 PINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAF 330
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV- 226
LES+ LN N LS ++E L L I +H NP CDC +R I M +K N+
Sbjct: 331 FRLPKLESLMLNTNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINM---NKTNIR 387
Query: 227 ---PVQPACTGPERLSGKVFSDLHADDFA--CKPEIRMDS--RYVEAVSSENATVVCRVD 279
P C P G+ +H D C P I +S ++ + ++ CR
Sbjct: 388 FMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSDLDVEADSYVSLHCRAT 447
Query: 280 SIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338
+ P I W +G+ LL NT ++ +V +G E + + G + C+A
Sbjct: 448 AEPQPEIYWITPSGKKLLPNTM---REKFYVHSEGTLE------IRGITPKEGGLYTCIA 498
Query: 339 ENRAGIADANFTLQVTYRGVGLPFLGGGHIN 369
N G + ++V G +P G +N
Sbjct: 499 TNLVGADLKSIMIKV---GGSVPQDNNGSLN 526
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 49 ELTQVLD--MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
+++Q+L + N L LP++ GL NLQ+L++ + I GA GL NL+ + L
Sbjct: 114 KMSQLLSVYLEENKLTELPEKCLY--GLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHL 171
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEA 166
+ N L I S F ++ L L L NPI +I+ FQ + L L ++ L I +A
Sbjct: 172 NSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIAGINLTEIPDDA 231
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
G ++LESI NRLS P +++ + L ++L+ NP
Sbjct: 232 LAGLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNP 271
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 15/191 (7%)
Query: 17 CPSTCICK---WKGGKQ-WME-----CRDKFLITIPEAPESELTQVLDMSGNNL-QILPK 66
CP C C+ W + +ME C D L+ P ++ TQ+L + NN+ +I
Sbjct: 29 CPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPAD-TQILLLQTNNIARIEHS 87
Query: 67 EAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLR 126
F +NL L L++ ++ + + + ++ L+ + L +N LT +P + L+
Sbjct: 88 TDFP----VNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQ 143
Query: 127 DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186
+L + N +S I GAF + L++L ++ +RL+ I+ + F +LE + L N +
Sbjct: 144 ELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRI 203
Query: 187 PVRSVEPLLKL 197
+ +PL+KL
Sbjct: 204 KDMNFQPLVKL 214
>sp|O15335|CHAD_HUMAN Chondroadherin OS=Homo sapiens GN=CHAD PE=2 SV=2
Length = 359
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N ++ L AF+ G +L+ L+L+ + + GALD + NL + + N L+
Sbjct: 151 ILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLS 208
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
S PS +R + +L L+ NP+ I AFQ F L L + + LE S AF G
Sbjct: 209 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVT 268
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+ + L NRL+ P S P L + L +NPW C C +R ++ WL K + P
Sbjct: 269 TLKHVHLENNRLNQLP--SNFPFDSLETLALTNNPWKCTCQLRGLRRWLEAKASRP-DAT 325
Query: 232 CTGPERLSGKVFSDLHADDF-ACK 254
C P + G+ D D F +CK
Sbjct: 326 CASPAKFKGQHIRD--TDAFRSCK 347
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRA---- 72
CP C C Q + C L IP+ SE T++L++ NN +L +FR
Sbjct: 23 CPQNCHCH--SDLQHVICDKVGLQKIPKV--SEKTKLLNLQRNNFPVLAANSFRAMPNLV 78
Query: 73 ------------------GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI 114
GL L L+L+ I + +GA D LT L + L N +T +
Sbjct: 79 SLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTEL 138
Query: 115 PSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174
P + L L L N I ++ GAFQ L L +SE+ L + P A ++L
Sbjct: 139 PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLA 198
Query: 175 SIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
++ N+LS +P ++ L + ++L NP
Sbjct: 199 KFHVDRNQLSSYPSAALSKLRVVEELKLSHNP 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,242,654
Number of Sequences: 539616
Number of extensions: 10572707
Number of successful extensions: 30943
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 596
Number of HSP's that attempted gapping in prelim test: 24894
Number of HSP's gapped (non-prelim): 4177
length of query: 600
length of database: 191,569,459
effective HSP length: 123
effective length of query: 477
effective length of database: 125,196,691
effective search space: 59718821607
effective search space used: 59718821607
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)