Query psy1672
Match_columns 600
No_of_seqs 510 out of 3798
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 20:16:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1672.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1672hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyj_A Leucine-rich repeat-con 100.0 6.9E-42 2.3E-46 369.6 30.9 329 14-357 32-435 (440)
2 3zyi_A Leucine-rich repeat-con 100.0 9.1E-42 3.1E-46 370.0 28.3 328 14-357 43-445 (452)
3 2xot_A Amphoterin-induced prot 100.0 1.6E-40 5.4E-45 349.7 25.9 319 13-354 8-336 (361)
4 2id5_A Lingo-1, leucine rich r 100.0 9.4E-38 3.2E-42 340.4 28.2 326 15-354 1-476 (477)
5 2v9t_B SLIT homolog 2 protein 100.0 2.4E-29 8.3E-34 245.7 18.3 212 14-256 2-213 (220)
6 2v70_A SLIT-2, SLIT homolog 2 100.0 2.4E-28 8.2E-33 238.6 16.5 212 14-256 2-214 (220)
7 1ozn_A Reticulon 4 receptor; N 100.0 1.6E-27 5.4E-32 241.8 19.7 234 16-253 1-284 (285)
8 2ifg_A High affinity nerve gro 100.0 8.4E-28 2.9E-32 250.8 18.2 317 17-355 1-345 (347)
9 3m19_A Variable lymphocyte rec 100.0 2.1E-27 7.1E-32 236.6 18.5 204 15-223 2-208 (251)
10 2ifg_A High affinity nerve gro 99.9 1.2E-26 4.3E-31 242.0 17.5 232 103-355 12-249 (347)
11 2o6q_A Variable lymphocyte rec 99.9 6.9E-25 2.3E-29 220.7 21.5 200 19-223 10-234 (270)
12 2z66_A Variable lymphocyte rec 99.9 2.3E-25 8E-30 228.0 17.0 223 17-246 1-302 (306)
13 1p9a_G Platelet glycoprotein I 99.9 1.3E-24 4.4E-29 221.2 18.6 200 20-223 3-223 (290)
14 2wfh_A SLIT homolog 2 protein 99.9 2E-24 6.9E-29 206.3 16.3 184 15-254 2-185 (193)
15 1w8a_A SLIT protein; signaling 99.9 1.3E-23 4.5E-28 200.4 15.7 186 16-256 1-187 (192)
16 2z80_A TOLL-like receptor 2, v 99.9 1.6E-23 5.5E-28 218.9 17.3 219 12-236 19-344 (353)
17 2z62_A TOLL-like receptor 4, v 99.9 6E-23 2E-27 207.0 19.1 213 19-236 1-267 (276)
18 3e6j_A Variable lymphocyte rec 99.9 1.1E-22 3.8E-27 199.6 19.1 177 15-223 11-188 (229)
19 2o6s_A Variable lymphocyte rec 99.9 1.8E-22 6.2E-27 194.7 20.3 174 17-221 1-175 (208)
20 2xwt_C Thyrotropin receptor; s 99.9 3E-22 1E-26 197.5 14.4 184 15-208 2-193 (239)
21 4g8a_A TOLL-like receptor 4; l 99.9 9.5E-22 3.2E-26 220.5 17.3 188 16-208 22-214 (635)
22 4g8a_A TOLL-like receptor 4; l 99.9 1E-21 3.5E-26 220.2 16.4 201 50-255 421-627 (635)
23 1ziw_A TOLL-like receptor 3; i 99.9 2.2E-21 7.6E-26 220.3 16.9 184 73-256 478-675 (680)
24 3rfs_A Internalin B, repeat mo 99.9 8.2E-21 2.8E-25 191.1 18.6 189 29-221 43-232 (272)
25 3vq2_A TLR4, TOLL-like recepto 99.8 2.7E-21 9.3E-26 216.5 14.4 217 30-249 379-602 (606)
26 3t6q_A CD180 antigen; protein- 99.8 3.2E-20 1.1E-24 207.8 14.5 195 51-248 402-603 (606)
27 3v47_A TOLL-like receptor 5B a 99.8 8.6E-20 2.9E-24 196.9 17.4 184 15-206 2-191 (455)
28 3t6q_A CD180 antigen; protein- 99.8 6E-20 2E-24 205.6 16.5 189 15-208 2-192 (606)
29 1xku_A Decorin; proteoglycan, 99.8 2.4E-19 8.4E-24 185.3 19.1 182 14-208 22-205 (330)
30 2ft3_A Biglycan; proteoglycan, 99.8 1.3E-19 4.5E-24 187.6 16.8 181 14-208 24-206 (332)
31 4ay9_X Follicle-stimulating ho 99.8 1.4E-19 4.7E-24 189.0 15.8 185 16-208 1-215 (350)
32 3vq2_A TLR4, TOLL-like recepto 99.8 1.7E-19 5.7E-24 202.0 17.6 185 19-208 5-194 (606)
33 3v47_A TOLL-like receptor 5B a 99.8 1.5E-19 5.3E-24 194.9 16.0 162 75-236 275-438 (455)
34 2z7x_B TOLL-like receptor 1, v 99.8 2.7E-19 9.2E-24 196.6 17.1 201 31-236 306-511 (520)
35 2z63_A TOLL-like receptor 4, v 99.8 5.4E-19 1.8E-23 196.1 17.4 184 20-208 2-190 (570)
36 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 1.3E-18 4.4E-23 193.2 18.9 186 31-222 335-525 (562)
37 2o6r_A Variable lymphocyte rec 99.8 1E-18 3.5E-23 163.9 15.2 138 17-161 1-138 (177)
38 1ziw_A TOLL-like receptor 3; i 99.8 9.1E-19 3.1E-23 198.8 17.1 182 20-208 1-184 (680)
39 3j0a_A TOLL-like receptor 5; m 99.8 2.7E-18 9.2E-23 199.8 18.0 217 30-248 269-604 (844)
40 2xwt_C Thyrotropin receptor; s 99.8 4.3E-18 1.5E-22 167.6 14.8 175 29-208 33-218 (239)
41 2z81_A CD282 antigen, TOLL-lik 99.8 1.6E-18 5.6E-23 191.5 12.7 173 32-207 10-184 (549)
42 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 4.6E-18 1.6E-22 188.8 15.9 176 6-193 13-193 (562)
43 3m19_A Variable lymphocyte rec 99.8 1E-17 3.4E-22 166.4 16.2 153 51-208 16-168 (251)
44 2z81_A CD282 antigen, TOLL-lik 99.7 4.2E-18 1.4E-22 188.2 14.1 203 30-235 313-539 (549)
45 2o6q_A Variable lymphocyte rec 99.7 1.6E-17 5.4E-22 166.8 16.8 153 51-208 18-170 (270)
46 2o6r_A Variable lymphocyte rec 99.7 1.8E-17 6.3E-22 155.3 14.0 136 99-234 28-165 (177)
47 3j0a_A TOLL-like receptor 5; m 99.7 1.5E-17 5.2E-22 193.4 16.4 180 20-207 1-186 (844)
48 3o6n_A APL1; leucine-rich repe 99.7 3.5E-17 1.2E-21 173.1 17.5 30 192-221 336-365 (390)
49 2z63_A TOLL-like receptor 4, v 99.7 5.8E-18 2E-22 187.8 11.8 183 51-236 375-561 (570)
50 2xot_A Amphoterin-induced prot 99.7 3.3E-17 1.1E-21 171.7 14.9 152 52-208 21-176 (361)
51 1ozn_A Reticulon 4 receptor; N 99.7 9.4E-17 3.2E-21 162.3 17.0 146 30-177 59-207 (285)
52 1xku_A Decorin; proteoglycan, 99.7 1.3E-16 4.5E-21 164.7 18.3 171 30-208 79-253 (330)
53 3o6n_A APL1; leucine-rich repe 99.7 6.7E-17 2.3E-21 170.9 16.1 174 30-208 26-199 (390)
54 3rfs_A Internalin B, repeat mo 99.7 6.7E-17 2.3E-21 162.4 15.3 154 49-208 41-194 (272)
55 2o6s_A Variable lymphocyte rec 99.7 1.8E-16 6.1E-21 152.5 15.9 110 99-208 28-137 (208)
56 3oja_B Anopheles plasmodium-re 99.7 1.5E-16 5.2E-21 177.9 17.4 104 31-136 79-184 (597)
57 2ft3_A Biglycan; proteoglycan, 99.7 1.8E-16 6E-21 164.0 16.2 171 31-207 82-276 (332)
58 1h6u_A Internalin H; cell adhe 99.7 3.1E-16 1.1E-20 160.6 17.2 167 29-209 43-209 (308)
59 3g39_A Variable lymphocyte rec 99.7 1.2E-16 3.9E-21 149.1 12.6 117 16-139 2-118 (170)
60 1ogq_A PGIP-2, polygalacturona 99.7 8.3E-17 2.8E-21 165.2 12.7 173 19-207 32-209 (313)
61 1p9a_G Platelet glycoprotein I 99.7 1.7E-16 6E-21 161.0 14.8 150 51-208 12-161 (290)
62 4fcg_A Uncharacterized protein 99.7 3.3E-16 1.1E-20 161.8 16.4 175 28-208 82-266 (328)
63 1h6t_A Internalin B; cell adhe 99.7 2.6E-16 9E-21 159.8 15.4 167 29-209 48-214 (291)
64 2r9u_A Variable lymphocyte rec 99.7 2.2E-16 7.7E-21 147.7 13.7 120 13-139 2-121 (174)
65 3oja_B Anopheles plasmodium-re 99.7 2.3E-16 8E-21 176.4 16.3 174 30-208 32-205 (597)
66 3g39_A Variable lymphocyte rec 99.7 2E-16 6.8E-21 147.5 12.7 121 101-224 11-132 (170)
67 4ezg_A Putative uncharacterize 99.7 4E-16 1.4E-20 148.9 14.4 147 51-207 46-193 (197)
68 1h6u_A Internalin H; cell adhe 99.7 3.5E-16 1.2E-20 160.2 14.8 167 29-209 65-231 (308)
69 3o53_A Protein LRIM1, AGAP0063 99.7 5.2E-17 1.8E-21 167.0 8.4 174 31-216 84-258 (317)
70 1xeu_A Internalin C; cellular 99.7 2.4E-16 8.2E-21 157.7 12.6 163 33-210 25-187 (263)
71 3zyj_A Leucine-rich repeat-con 99.7 4.2E-16 1.4E-20 167.7 14.7 153 51-208 45-198 (440)
72 4fcg_A Uncharacterized protein 99.7 6.1E-16 2.1E-20 159.9 15.0 152 51-209 83-243 (328)
73 3zyi_A Leucine-rich repeat-con 99.7 4.7E-16 1.6E-20 167.8 14.1 153 51-208 56-209 (452)
74 1wwl_A Monocyte differentiatio 99.7 2.2E-16 7.4E-21 162.0 10.2 195 13-209 2-242 (312)
75 2r9u_A Variable lymphocyte rec 99.6 1.2E-15 4E-20 142.8 13.2 119 102-223 15-134 (174)
76 2z7x_B TOLL-like receptor 1, v 99.6 8.3E-16 2.8E-20 168.7 13.2 155 30-193 3-162 (520)
77 1wwl_A Monocyte differentiatio 99.6 4.8E-16 1.6E-20 159.4 10.3 175 29-209 97-288 (312)
78 3oja_A Leucine-rich immune mol 99.6 2.9E-16 9.8E-21 171.2 9.1 155 51-214 101-256 (487)
79 2z62_A TOLL-like receptor 4, v 99.6 2.2E-15 7.5E-20 151.4 14.8 152 52-208 10-162 (276)
80 1m9s_A Internalin B; cell inva 99.6 1.4E-15 4.8E-20 169.6 14.4 165 30-208 46-210 (605)
81 2id5_A Lingo-1, leucine rich r 99.6 3E-15 1E-19 162.5 14.6 153 51-208 13-165 (477)
82 2z80_A TOLL-like receptor 2, v 99.6 2E-15 7E-20 157.3 11.9 152 52-208 34-187 (353)
83 4eco_A Uncharacterized protein 99.6 1E-14 3.5E-19 164.3 18.5 153 51-209 435-601 (636)
84 4fmz_A Internalin; leucine ric 99.6 6.6E-15 2.3E-19 152.8 15.6 169 30-210 158-326 (347)
85 1ogq_A PGIP-2, polygalacturona 99.6 2.4E-15 8.4E-20 154.2 11.9 191 15-208 32-234 (313)
86 1h6t_A Internalin B; cell adhe 99.6 9.4E-15 3.2E-19 148.3 15.4 145 50-208 47-191 (291)
87 2ell_A Acidic leucine-rich nuc 99.6 3.8E-15 1.3E-19 138.1 10.7 133 51-188 26-164 (168)
88 3cvr_A Invasion plasmid antige 99.6 2E-14 6.7E-19 158.9 17.0 153 29-208 61-220 (571)
89 3cvr_A Invasion plasmid antige 99.6 2.2E-14 7.7E-19 158.4 17.2 156 29-209 82-244 (571)
90 4glp_A Monocyte differentiatio 99.6 3E-15 1E-19 153.3 9.1 174 30-208 94-285 (310)
91 4ezg_A Putative uncharacterize 99.6 1.6E-14 5.5E-19 137.7 13.6 149 29-185 46-195 (197)
92 4fmz_A Internalin; leucine ric 99.6 2.1E-14 7.3E-19 148.9 15.6 165 30-208 135-300 (347)
93 3g06_A SSPH2 (leucine-rich rep 99.6 1.4E-14 4.9E-19 161.8 15.0 165 16-208 30-194 (622)
94 2z66_A Variable lymphocyte rec 99.6 6.1E-15 2.1E-19 150.4 10.7 179 30-210 104-289 (306)
95 4glp_A Monocyte differentiatio 99.6 6.2E-15 2.1E-19 150.9 10.6 156 51-208 93-264 (310)
96 3rgz_A Protein brassinosteroid 99.6 1.9E-14 6.5E-19 165.6 15.4 177 30-208 445-693 (768)
97 3rgz_A Protein brassinosteroid 99.6 1.4E-14 4.8E-19 166.7 13.6 161 51-213 396-556 (768)
98 4ecn_A Leucine-rich repeat pro 99.6 7E-14 2.4E-18 161.5 19.3 177 30-207 622-818 (876)
99 2v9t_B SLIT homolog 2 protein 99.5 2.8E-14 9.7E-19 138.6 13.1 109 100-208 33-141 (220)
100 3oja_A Leucine-rich immune mol 99.5 3.8E-15 1.3E-19 162.3 7.2 177 30-213 102-287 (487)
101 3o53_A Protein LRIM1, AGAP0063 99.5 3.5E-15 1.2E-19 153.2 6.5 169 30-205 102-272 (317)
102 1m9s_A Internalin B; cell inva 99.5 1.8E-14 6.1E-19 160.7 12.6 160 36-209 30-189 (605)
103 1xeu_A Internalin C; cellular 99.5 3.5E-14 1.2E-18 141.9 13.1 149 29-190 43-191 (263)
104 4eco_A Uncharacterized protein 99.5 8.3E-14 2.8E-18 156.8 17.5 177 30-208 356-549 (636)
105 1o6v_A Internalin A; bacterial 99.5 5E-14 1.7E-18 152.5 15.0 167 29-209 201-367 (466)
106 2v70_A SLIT-2, SLIT homolog 2 99.5 4.8E-14 1.7E-18 137.0 13.0 132 29-162 34-168 (220)
107 3bz5_A Internalin-J, INLJ; leu 99.5 1.4E-13 4.9E-18 148.6 17.9 160 29-208 44-204 (457)
108 2ell_A Acidic leucine-rich nuc 99.5 2.7E-14 9.1E-19 132.3 9.9 132 73-207 22-159 (168)
109 1o6v_A Internalin A; bacterial 99.5 1E-13 3.5E-18 150.1 15.7 164 29-207 48-211 (466)
110 4ecn_A Leucine-rich repeat pro 99.5 2.4E-13 8.1E-18 157.1 17.9 181 30-213 598-794 (876)
111 3e6j_A Variable lymphocyte rec 99.5 1.7E-13 5.7E-18 134.0 14.2 127 78-208 22-148 (229)
112 1a9n_A U2A', U2A'; complex (nu 99.5 2.9E-14 9.9E-19 133.3 8.4 126 51-181 21-150 (176)
113 2je0_A Acidic leucine-rich nuc 99.5 4.9E-14 1.7E-18 127.8 8.8 126 75-203 17-148 (149)
114 1a9n_A U2A', U2A'; complex (nu 99.5 5.5E-14 1.9E-18 131.4 9.0 131 73-207 17-152 (176)
115 2wfh_A SLIT homolog 2 protein 99.5 1.9E-13 6.3E-18 130.0 12.2 102 78-183 13-114 (193)
116 3sb4_A Hypothetical leucine ri 99.5 8.1E-14 2.8E-18 143.8 10.5 151 51-206 51-308 (329)
117 3bz5_A Internalin-J, INLJ; leu 99.5 7.8E-13 2.7E-17 142.8 18.5 158 29-207 66-224 (457)
118 2je0_A Acidic leucine-rich nuc 99.5 5.7E-14 2E-18 127.4 7.9 125 51-180 19-149 (149)
119 4ay9_X Follicle-stimulating ho 99.5 1.9E-13 6.5E-18 142.4 12.3 152 52-208 12-167 (350)
120 3g06_A SSPH2 (leucine-rich rep 99.4 1.1E-12 3.7E-17 146.6 18.0 77 123-208 221-297 (622)
121 1jl5_A Outer protein YOPM; leu 99.4 2.7E-12 9.3E-17 138.4 18.3 137 30-186 74-210 (454)
122 3rfe_A Platelet glycoprotein I 99.4 2.1E-13 7.1E-18 120.9 7.7 55 200-254 60-116 (130)
123 3sb4_A Hypothetical leucine ri 99.4 3.8E-13 1.3E-17 138.8 11.0 103 98-202 225-328 (329)
124 3knb_A Titin; IG-like, titin, 99.4 1E-12 3.5E-17 110.9 10.2 93 255-354 6-98 (100)
125 1jl5_A Outer protein YOPM; leu 99.4 5E-12 1.7E-16 136.4 18.2 158 29-208 93-250 (454)
126 4b8c_D Glucose-repressible alc 99.4 8.5E-14 2.9E-18 158.8 4.2 152 51-208 193-354 (727)
127 3knb_B Obscurin-like protein 1 99.4 9.1E-13 3.1E-17 112.6 8.8 94 253-355 12-105 (107)
128 4b8c_D Glucose-repressible alc 99.4 8.1E-13 2.8E-17 150.7 9.1 151 51-209 175-330 (727)
129 3goz_A Leucine-rich repeat-con 99.3 4.2E-13 1.4E-17 140.4 5.2 156 51-208 24-209 (362)
130 1dce_A Protein (RAB geranylger 99.3 7.2E-12 2.5E-16 138.7 11.9 105 100-209 442-547 (567)
131 1dce_A Protein (RAB geranylger 99.3 7.3E-12 2.5E-16 138.7 11.6 123 75-202 441-567 (567)
132 1ds9_A Outer arm dynein; leuci 99.3 5.7E-14 1.9E-18 134.0 -5.4 147 51-207 25-184 (198)
133 2ast_B S-phase kinase-associat 99.3 1.2E-12 4.1E-17 134.9 3.8 152 51-206 72-233 (336)
134 2cqv_A MLCK, myosin light chai 99.2 5.1E-11 1.7E-15 102.5 11.6 97 253-358 6-102 (114)
135 3qp3_A Titin; I-SET IG-like, s 99.2 3.9E-11 1.3E-15 101.0 10.2 95 252-355 6-100 (103)
136 2kdg_A Myotilin; immonoglobuli 99.2 4E-11 1.4E-15 100.2 10.1 94 254-355 5-98 (100)
137 3goz_A Leucine-rich repeat-con 99.2 3.9E-12 1.3E-16 133.0 4.6 154 53-208 2-180 (362)
138 2ca6_A RAN GTPase-activating p 99.2 1.8E-12 6.2E-17 136.6 1.9 157 50-209 95-288 (386)
139 1g1c_A Immunoglobulin-like dom 99.2 7.2E-11 2.4E-15 98.5 10.6 91 254-354 5-97 (99)
140 1wit_A Twitchin 18TH IGSF modu 99.2 4.8E-11 1.6E-15 98.6 9.4 88 255-353 3-92 (93)
141 1wwb_X Protein (brain derived 99.2 6.2E-11 2.1E-15 100.3 9.9 86 267-356 14-99 (103)
142 4fdw_A Leucine rich hypothetic 99.2 1.4E-10 4.8E-15 122.8 14.6 167 30-205 160-333 (401)
143 2ca6_A RAN GTPase-activating p 99.2 4.1E-12 1.4E-16 133.9 2.2 176 30-208 35-257 (386)
144 2ast_B S-phase kinase-associat 99.2 6.9E-12 2.4E-16 129.2 3.9 174 30-206 73-258 (336)
145 2edj_A Roundabout homolog 2; K 99.2 5.6E-11 1.9E-15 99.5 8.6 91 254-355 8-98 (100)
146 1u2h_A APEG-1, aortic preferen 99.2 9.6E-11 3.3E-15 97.7 9.9 92 255-354 6-97 (99)
147 3cx2_A Myosin-binding protein 99.2 1.9E-10 6.6E-15 97.9 12.0 97 255-354 5-107 (108)
148 1w8a_A SLIT protein; signaling 99.2 1E-10 3.6E-15 110.7 11.1 104 102-208 11-115 (192)
149 3irg_A Titin; IG-like, titin, 99.2 1.2E-10 4E-15 97.0 10.2 93 255-354 6-98 (100)
150 2kkq_A Myotilin; unknown funct 99.2 1.8E-10 6.2E-15 99.6 11.2 97 254-357 15-111 (116)
151 3irg_B Obscurin-like protein 1 99.2 1E-10 3.5E-15 99.0 9.2 95 252-355 11-105 (107)
152 1he7_A High affinity nerve gro 99.1 1.2E-10 4.3E-15 101.9 9.8 88 268-359 14-103 (126)
153 1ds9_A Outer arm dynein; leuci 99.1 1.7E-13 5.9E-18 130.6 -9.3 135 74-213 17-158 (198)
154 3puc_A Titin; I-SET IG-like do 99.1 1.6E-10 5.5E-15 96.2 10.0 92 254-354 6-97 (99)
155 4fdw_A Leucine rich hypothetic 99.1 2.6E-10 8.9E-15 120.8 13.6 167 30-205 138-310 (401)
156 2dm3_A KIAA0992 protein, palla 99.1 7.1E-11 2.4E-15 100.6 7.2 97 254-358 9-105 (110)
157 1gxe_A Myosin binding protein 99.1 1.4E-10 4.8E-15 103.9 9.3 85 261-353 25-137 (139)
158 2dm2_A Palladin; beta-sandwich 99.1 1.9E-10 6.7E-15 98.0 9.7 97 254-357 8-104 (110)
159 2e7c_A Myosin-binding protein 99.1 2.8E-10 9.6E-15 98.5 10.5 94 253-356 20-116 (118)
160 2eo9_A Roundabout homolog 1; b 99.1 1.6E-10 5.6E-15 99.9 9.0 93 254-357 8-100 (118)
161 1nct_A Titin; cell adhesion, g 99.1 1.2E-10 4.3E-15 98.9 7.9 92 253-353 13-104 (106)
162 2yr3_A Myosin light chain kina 99.1 1.2E-10 4.1E-15 97.2 7.6 89 253-353 10-98 (99)
163 2bk8_A Connectin, M1, titin he 99.1 5E-10 1.7E-14 93.1 11.3 86 259-353 6-92 (97)
164 3kvq_A Vascular endothelial gr 99.1 2.2E-10 7.4E-15 97.1 8.6 93 254-357 10-102 (108)
165 2yuz_A Myosin-binding protein 99.1 5E-10 1.7E-14 94.2 10.2 89 255-356 8-96 (100)
166 2ckn_A Basic fibroblast growth 99.1 3.9E-10 1.3E-14 93.5 9.5 85 255-353 10-94 (95)
167 2dav_A SLOW MYBP-C, myosin-bin 99.1 8.5E-10 2.9E-14 96.6 11.0 97 256-355 9-111 (126)
168 2edn_A Myosin-binding protein 99.0 9.6E-10 3.3E-14 95.1 10.6 96 256-355 14-116 (118)
169 1z7x_W Ribonuclease inhibitor; 99.0 4.6E-11 1.6E-15 128.5 2.5 60 51-112 5-69 (461)
170 1z7x_W Ribonuclease inhibitor; 99.0 1.5E-11 5.2E-16 132.3 -1.8 155 51-208 201-383 (461)
171 1fhg_A Telokin; immunoglobulin 99.0 1E-09 3.4E-14 99.9 10.5 96 253-356 40-135 (154)
172 3caf_A Fibroblast growth facto 99.0 5.2E-10 1.8E-14 93.4 7.8 84 262-353 16-99 (100)
173 3bfo_A Mucosa-associated lymph 99.0 7.9E-10 2.7E-14 90.8 8.3 81 255-353 4-85 (91)
174 3un9_A NLR family member X1; l 99.0 2.9E-11 9.9E-16 126.9 -1.8 159 50-208 73-252 (372)
175 2lu7_A Obscurin-like protein 1 99.0 1.3E-09 4.6E-14 88.4 8.5 78 262-353 4-81 (84)
176 1waa_A Titin; metal binding pr 99.0 1.1E-09 3.9E-14 90.6 8.0 85 255-353 6-90 (93)
177 2cry_A KIN of IRRE-like protei 99.0 2.2E-10 7.6E-15 99.7 3.7 98 253-355 13-113 (122)
178 3m45_A Cell adhesion molecule 98.9 3.4E-09 1.2E-13 89.4 10.0 98 255-355 7-106 (108)
179 3s35_X Vascular endothelial gr 98.9 2.1E-09 7.3E-14 93.2 9.0 96 262-358 16-113 (122)
180 3so5_A LIG-3, leucine-rich rep 98.9 2.8E-09 9.6E-14 90.1 9.2 99 254-353 10-111 (112)
181 2cr3_A Basic fibroblast growth 98.9 2.3E-09 7.9E-14 89.6 8.5 81 261-355 10-90 (99)
182 1wwc_A Protein (NT-3 growth fa 98.9 5.3E-09 1.8E-13 90.3 10.7 84 270-358 21-104 (118)
183 1gl4_B Basement membrane-speci 98.9 3.7E-09 1.3E-13 87.9 9.3 79 261-353 17-96 (98)
184 3rbs_A Myomesin-1; immunoglobu 98.9 9.3E-10 3.2E-14 105.4 6.2 79 264-353 126-205 (207)
185 3qr2_A Basigin; CD147, EMMPRIN 98.9 3.9E-09 1.3E-13 93.8 9.4 98 249-346 16-117 (137)
186 1x44_A Myosin-binding protein 98.9 8.2E-09 2.8E-13 86.8 10.8 89 257-357 10-98 (103)
187 2ens_A Advanced glycosylation 98.9 1.4E-09 4.8E-14 90.2 5.8 81 255-353 11-91 (96)
188 2edf_A Obscurin; beta-sandwich 98.9 4.8E-09 1.6E-13 88.1 9.2 90 254-357 8-97 (103)
189 2v9t_A Roundabout homolog 1; s 98.9 2.4E-09 8.3E-14 92.2 7.1 99 253-353 8-107 (117)
190 2wv3_A Neuroplastin; igcam, me 98.9 6.5E-09 2.2E-13 97.2 10.5 94 255-354 93-189 (190)
191 2lvc_A Obscurin-like protein 1 98.9 4.8E-09 1.6E-13 86.5 8.2 68 264-341 16-83 (91)
192 2dlt_A Myosin binding protein 98.9 4.2E-09 1.4E-13 89.0 7.9 89 254-354 8-96 (106)
193 2e6p_A Obscurin-like protein 1 98.9 8.2E-09 2.8E-13 86.8 9.3 88 255-356 8-98 (104)
194 2k1m_A Myosin-binding protein 98.8 1.3E-08 4.5E-13 84.1 9.8 85 256-354 10-94 (95)
195 4hwu_A Fibroblast growth facto 98.8 1.1E-08 3.6E-13 84.6 8.6 80 261-355 8-87 (95)
196 2yuv_A Myosin-binding protein 98.8 2E-08 6.8E-13 83.8 10.2 89 254-356 7-96 (100)
197 2edk_A Myosin-binding protein 98.8 5.1E-09 1.8E-13 87.7 6.5 90 255-354 9-98 (101)
198 4fa8_A Secreted protein BARF1; 98.8 4.1E-09 1.4E-13 100.6 6.1 88 256-348 108-195 (203)
199 2eny_A Obscurin; beta-sandwich 98.8 1.1E-08 3.8E-13 86.4 8.0 89 256-357 10-99 (104)
200 3mtr_A N-CAM-1, NCAM-1, neural 98.8 1.7E-08 5.7E-13 96.5 10.0 96 254-357 19-114 (215)
201 2e7b_A Obscurin; IG-like domai 98.8 1.9E-08 6.6E-13 84.3 9.2 90 254-357 8-97 (103)
202 2dku_A KIAA1556 protein; beta- 98.8 3.9E-08 1.3E-12 82.4 10.6 92 253-358 7-98 (103)
203 2edh_A Obscurin; structural ge 98.8 6.7E-08 2.3E-12 82.5 12.2 88 255-357 20-107 (113)
204 3un9_A NLR family member X1; l 98.8 4.9E-10 1.7E-14 117.4 -1.6 142 50-192 102-260 (372)
205 2a38_A Titin; Z1Z2, structural 98.7 2.4E-08 8.2E-13 93.2 9.4 90 255-353 104-193 (194)
206 4fqp_A Poliovirus receptor; im 98.7 1.6E-08 5.4E-13 102.6 8.8 81 263-358 226-307 (313)
207 3rbg_A Cytotoxic and regulator 98.7 9.2E-09 3.1E-13 89.8 6.0 96 259-357 6-103 (124)
208 3mjg_X Beta-type platelet-deri 98.7 4.8E-08 1.6E-12 97.5 12.0 99 255-357 182-280 (289)
209 2r15_A Myomesin-1; sarcomeric 98.7 4.7E-08 1.6E-12 92.6 11.1 85 261-354 124-209 (212)
210 2j8h_A Titin, connectin; cardi 98.7 5.8E-08 2E-12 90.9 11.5 94 254-356 4-99 (197)
211 2j8h_A Titin, connectin; cardi 98.7 3.1E-08 1.1E-12 92.7 9.5 84 262-354 112-196 (197)
212 2v5t_A NCAM2, N-CAM 2, neural 98.7 1.5E-08 5.1E-13 94.1 7.1 81 263-354 107-187 (189)
213 3b5h_A Cervical EMMPRIN, HAB18 98.7 6.1E-08 2.1E-12 89.9 11.2 95 254-354 83-182 (184)
214 3kld_A Contactin 4, axcam, BIG 98.7 2E-08 6.8E-13 105.3 8.7 81 261-354 302-382 (384)
215 3lcy_A Titin; A-BAND, IG tande 98.7 5.5E-08 1.9E-12 90.7 10.7 95 254-357 7-101 (197)
216 2dm7_A KIAA1556 protein; beta- 98.7 6.6E-08 2.3E-12 81.7 9.9 90 253-357 7-96 (108)
217 2rik_A Titin; I-SET IG fold, p 98.7 5.4E-08 1.9E-12 96.8 10.8 91 254-353 192-282 (284)
218 2v44_A NCAM2, neural cell adhe 98.7 4.6E-08 1.6E-12 91.0 9.5 90 255-354 97-186 (189)
219 2cpc_A KIAA0657 protein; immun 98.7 8.3E-08 2.9E-12 81.8 10.2 80 264-357 23-102 (113)
220 1pd6_A Cardiac MYBP-C;, myosin 98.7 5.7E-08 1.9E-12 82.0 8.9 86 255-353 16-102 (104)
221 2cr6_A KIAA1556 protein, obscu 98.7 2.7E-08 9.4E-13 85.4 6.8 90 256-358 15-105 (115)
222 2wim_A N-CAM 2, NCAM2, neural 98.7 2.9E-08 9.8E-13 99.0 7.9 84 263-357 203-286 (291)
223 2o26_X MAST/stem cell growth f 98.7 6E-08 2E-12 96.9 10.2 100 254-355 188-288 (290)
224 1epf_A NCAM, protein (neural c 98.7 5.1E-08 1.8E-12 90.8 9.0 89 255-353 101-189 (191)
225 2iep_A Muscle-specific kinase 98.7 2.9E-08 1E-12 92.4 7.3 90 254-355 100-190 (192)
226 1eaj_A Coxsackie virus and ade 98.7 6E-08 2.1E-12 83.7 8.7 104 251-354 2-124 (126)
227 2yd1_A Tyrosine-protein phosph 98.6 4.2E-08 1.4E-12 93.4 8.1 90 255-356 111-201 (212)
228 2yd1_A Tyrosine-protein phosph 98.6 1.8E-07 6E-12 89.0 12.4 96 254-356 6-103 (212)
229 2a38_A Titin; Z1Z2, structural 98.6 6.3E-08 2.2E-12 90.3 9.0 94 254-354 5-98 (194)
230 2yd6_A PTPRD protein; hydrolas 98.6 5.8E-08 2E-12 92.5 8.9 94 255-354 109-203 (212)
231 3p3y_A Neurofascin; IG domains 98.6 3.4E-08 1.2E-12 103.4 7.9 89 256-354 314-402 (404)
232 2yd6_A PTPRD protein; hydrolas 98.6 1.1E-07 3.7E-12 90.6 10.5 95 254-356 6-101 (212)
233 2y25_A Myomesin; structural pr 98.6 1.2E-07 4.1E-12 95.7 11.2 84 262-354 230-314 (317)
234 4gos_A V-SET domain-containing 98.6 1E-07 3.6E-12 83.3 9.3 95 259-353 10-118 (125)
235 3laf_A Deleted in colorectal c 98.6 2.7E-08 9.1E-13 104.3 6.3 87 256-354 314-400 (403)
236 2eo1_A OBSCN protein, cDNA FLJ 98.6 8.5E-08 2.9E-12 80.1 8.1 81 262-356 19-99 (102)
237 2rik_A Titin; I-SET IG fold, p 98.6 1.2E-07 4.2E-12 94.2 10.8 94 254-356 5-98 (284)
238 1itb_B Type 1 interleukin-1 re 98.6 1.1E-07 3.6E-12 96.2 10.3 100 254-353 208-312 (315)
239 3lcy_A Titin; A-BAND, IG tande 98.6 1.1E-07 3.7E-12 88.7 9.6 85 262-355 111-196 (197)
240 3ejj_X Macrophage colony-stimu 98.6 1.6E-07 5.5E-12 93.4 11.3 96 254-356 186-282 (289)
241 1cs6_A Axonin-1; neural cell a 98.6 7E-08 2.4E-12 100.5 9.0 82 260-354 300-381 (382)
242 3s97_C Contactin-1; carbonic a 98.6 9E-08 3.1E-12 89.6 8.9 87 255-354 114-200 (201)
243 2x1w_L Vascular endothelial gr 98.6 1.2E-07 4E-12 90.6 9.8 93 262-357 113-209 (213)
244 2va4_A NCAM2, N-CAM 2, neural 98.6 1.7E-07 5.7E-12 87.1 10.6 84 262-356 12-95 (192)
245 2e6q_A Obscurin-like protein 1 98.6 4.1E-07 1.4E-11 77.8 12.0 96 255-358 9-108 (112)
246 2nzi_A Titin; IG-domain, FNIII 98.6 1.5E-07 5.1E-12 94.6 10.9 94 254-356 4-99 (305)
247 1qz1_A Neural cell adhesion mo 98.6 9.9E-08 3.4E-12 95.1 9.4 86 263-355 205-290 (291)
248 4frw_A Poliovirus receptor-rel 98.6 5.6E-08 1.9E-12 91.8 6.9 85 262-354 126-210 (218)
249 2c5d_C AXL oncogene, tyrosine- 98.6 1.1E-07 3.9E-12 88.9 8.9 96 255-354 3-104 (195)
250 2vr9_A Roundabout 1, ROBO; imm 98.6 1.1E-07 3.9E-12 90.4 9.0 92 257-354 111-205 (217)
251 2iep_A Muscle-specific kinase 98.6 1.5E-07 5.2E-12 87.5 9.3 92 255-356 8-100 (192)
252 1rhf_A Tyrosine-protein kinase 98.6 1.8E-07 6.1E-12 86.4 9.6 94 255-355 3-97 (182)
253 2va4_A NCAM2, N-CAM 2, neural 98.6 2.9E-07 9.9E-12 85.4 11.0 86 264-353 104-191 (192)
254 2jll_A NCAM2, neural cell adhe 98.6 3E-07 1E-11 95.8 12.2 93 261-357 7-101 (389)
255 2v5m_A Dscam; neurobiology SPL 98.6 1.1E-07 3.7E-12 99.1 8.6 74 261-353 314-387 (388)
256 1z9m_A GAPA225; nectin-like, I 98.5 1.5E-07 5.3E-12 84.2 8.4 96 259-357 43-140 (145)
257 2v9r_A Roundabout homolog 1; p 98.5 1E-07 3.5E-12 90.1 7.5 86 260-357 117-204 (212)
258 3grw_A Fibroblast growth facto 98.5 3E-07 1E-11 88.9 10.9 97 261-358 121-221 (241)
259 2wv3_A Neuroplastin; igcam, me 98.5 2.5E-07 8.7E-12 86.1 9.8 80 262-356 10-92 (190)
260 2c5d_C AXL oncogene, tyrosine- 98.5 2E-07 6.8E-12 87.2 8.8 84 254-353 106-191 (195)
261 3uto_A Twitchin; kinase, muscl 98.5 2.4E-07 8.3E-12 102.4 10.7 91 255-354 483-573 (573)
262 3k0w_A Mucosa-associated lymph 98.5 1.6E-07 5.5E-12 89.9 8.0 82 255-354 119-201 (218)
263 3b43_A Titin; I-SET IG fold, e 98.5 2.5E-07 8.7E-12 102.3 10.7 91 256-355 386-476 (570)
264 3ojm_B Fibroblast growth facto 98.5 3.2E-07 1.1E-11 87.8 10.0 95 261-357 125-223 (231)
265 4fa8_A Secreted protein BARF1; 98.5 9.9E-08 3.4E-12 91.0 6.1 91 263-356 2-106 (203)
266 1bih_A Hemolin; insect immunit 98.5 2.6E-07 9E-12 96.3 9.9 76 264-353 319-394 (395)
267 4fom_A Poliovirus receptor-rel 98.5 4.1E-08 1.4E-12 99.1 3.5 80 264-357 222-302 (308)
268 4h09_A Hypothetical leucine ri 98.5 3.8E-07 1.3E-11 95.4 10.9 138 62-205 206-343 (379)
269 2ny1_B T-cell surface glycopro 98.5 1.8E-07 6.2E-12 86.8 7.3 75 263-356 106-180 (184)
270 3qs7_E FL cytokine receptor; i 98.5 2.8E-07 9.7E-12 98.1 9.7 97 248-354 37-138 (423)
271 2yd9_A Receptor-type tyrosine- 98.5 3.2E-07 1.1E-11 92.3 9.7 95 254-356 6-101 (304)
272 1pko_A Myelin oligodendrocyte 98.5 8.1E-07 2.8E-11 78.7 11.1 95 260-354 12-120 (139)
273 3bp6_B Programmed cell death 1 98.5 2.9E-07 1E-11 86.6 8.6 91 260-356 8-104 (202)
274 2v9r_A Roundabout homolog 1; p 98.5 2E-07 7E-12 88.0 7.3 100 254-355 9-109 (212)
275 3ojm_B Fibroblast growth facto 98.5 2.8E-07 9.7E-12 88.1 8.4 87 262-356 27-113 (231)
276 2v5t_A NCAM2, N-CAM 2, neural 98.5 4.4E-07 1.5E-11 83.9 9.3 90 255-354 3-94 (189)
277 1rhf_A Tyrosine-protein kinase 98.5 4E-07 1.4E-11 83.9 8.9 82 254-353 98-181 (182)
278 2v44_A NCAM2, neural cell adhe 98.5 6.3E-07 2.1E-11 83.2 10.2 88 258-355 6-95 (189)
279 1epf_A NCAM, protein (neural c 98.4 5E-07 1.7E-11 84.0 9.3 92 256-354 4-98 (191)
280 1f97_A Junction adhesion molec 98.4 4.4E-07 1.5E-11 85.6 8.6 88 261-353 111-205 (212)
281 4f80_A Butyrophilin subfamily 98.4 9.7E-07 3.3E-11 84.8 11.1 94 261-354 11-118 (226)
282 4dep_C Interleukin-1 receptor 98.4 5.9E-08 2E-12 99.8 2.5 91 265-355 237-333 (349)
283 2yd9_A Receptor-type tyrosine- 98.4 4.1E-07 1.4E-11 91.5 8.6 88 255-357 206-293 (304)
284 3b43_A Titin; I-SET IG fold, e 98.4 5.5E-07 1.9E-11 99.5 10.4 91 255-353 478-568 (570)
285 2vr9_A Roundabout 1, ROBO; imm 98.4 4.5E-07 1.5E-11 86.2 8.4 97 254-355 9-106 (217)
286 1e07_A Carcinoembryonic antige 98.4 4.2E-07 1.4E-11 101.7 9.4 75 261-355 566-640 (642)
287 1hng_A CD2; T lymphocyte adhes 98.4 3.3E-07 1.1E-11 85.0 7.1 87 263-355 5-99 (176)
288 3sgj_C Human FCG3A receptor; r 98.4 1.4E-07 4.9E-12 89.7 4.7 76 264-356 98-175 (204)
289 3grw_A Fibroblast growth facto 98.4 7E-07 2.4E-11 86.3 9.4 88 261-356 22-109 (241)
290 3jz7_A MCAR, CAR, coxsackievir 98.4 3.9E-07 1.3E-11 85.9 7.4 80 262-354 129-211 (214)
291 2y23_A Myomesin; structural pr 98.4 4.2E-07 1.4E-11 91.4 7.9 79 264-353 231-310 (312)
292 3r4d_A CEA-related cell adhesi 98.4 4.2E-07 1.4E-11 85.7 7.5 77 266-354 122-199 (208)
293 3rbs_A Myomesin-1; immunoglobu 98.4 1.1E-06 3.7E-11 83.8 10.4 82 261-351 9-91 (207)
294 2fbo_J V1V2;, variable region- 98.4 4.4E-07 1.5E-11 88.1 7.7 91 261-352 143-249 (250)
295 1vca_A VCAM-D1,2, human vascul 98.4 7.5E-07 2.6E-11 84.5 9.1 80 264-356 11-91 (202)
296 3ogk_B Coronatine-insensitive 98.4 6.4E-08 2.2E-12 107.3 1.7 154 51-207 320-500 (592)
297 3k0w_A Mucosa-associated lymph 98.4 5.6E-07 1.9E-11 86.1 8.1 85 253-355 17-102 (218)
298 1ry7_B FGFR-3, fibroblast grow 98.4 4.2E-07 1.5E-11 92.6 7.4 92 262-357 230-329 (334)
299 4i0k_A CD276 antigen; immunogl 98.4 6.5E-07 2.2E-11 85.4 8.3 87 264-357 120-208 (222)
300 2qsq_A Carcinoembryonic antige 98.4 9.2E-07 3.2E-11 75.5 8.2 86 263-354 9-108 (111)
301 1hng_A CD2; T lymphocyte adhes 98.4 2.2E-07 7.6E-12 86.1 4.5 65 269-353 110-174 (176)
302 3ogk_B Coronatine-insensitive 98.4 9.8E-08 3.4E-12 105.8 2.5 151 51-206 140-304 (592)
303 4h09_A Hypothetical leucine ri 98.4 1.3E-06 4.3E-11 91.4 10.9 126 75-204 194-319 (379)
304 3udw_C Poliovirus receptor; PV 98.4 9.2E-07 3.2E-11 75.3 8.1 95 261-355 7-116 (118)
305 4gt6_A Cell surface protein; l 98.4 9E-07 3.1E-11 93.2 9.7 126 76-206 243-368 (394)
306 2jll_A NCAM2, neural cell adhe 98.4 1.2E-06 4E-11 91.2 10.5 94 255-355 101-194 (389)
307 1f97_A Junction adhesion molec 98.4 9.2E-07 3.2E-11 83.3 8.8 93 257-356 4-104 (212)
308 2nzi_A Titin; IG-domain, FNIII 98.3 1.4E-06 4.8E-11 87.3 10.6 87 262-357 112-199 (305)
309 3r08_E T-cell surface glycopro 98.3 2.1E-07 7.1E-12 74.7 3.2 60 261-340 6-66 (82)
310 3p2t_A Leukocyte immunoglobuli 98.3 5.6E-07 1.9E-11 84.5 6.8 88 255-354 6-95 (196)
311 4fs7_A Uncharacterized protein 98.3 2.4E-06 8.1E-11 89.9 12.2 135 62-205 242-376 (394)
312 1fnl_A Low affinity immunoglob 98.3 7.8E-07 2.7E-11 81.9 7.5 79 255-354 8-87 (175)
313 3jz7_A MCAR, CAR, coxsackievir 98.3 1E-06 3.5E-11 83.0 8.4 98 259-357 5-122 (214)
314 4f80_A Butyrophilin subfamily 98.3 5.7E-07 2E-11 86.4 6.8 86 261-354 125-212 (226)
315 1jhl_L IGG1-kappa D11.15 FV (l 98.3 1.6E-06 5.6E-11 73.2 8.8 82 258-342 5-94 (108)
316 4dkd_C Macrophage colony-stimu 98.3 1.3E-06 4.4E-11 86.9 9.6 97 254-357 186-283 (292)
317 1f2q_A High affinity immunoglo 98.3 5.5E-07 1.9E-11 82.9 6.4 77 263-356 94-172 (176)
318 1xau_A B- and T-lymphocyte att 98.3 1.5E-06 5.2E-11 72.1 8.1 102 252-355 11-116 (122)
319 2p1m_B Transport inhibitor res 98.3 1.1E-07 3.6E-12 105.5 1.6 153 51-207 316-493 (594)
320 4gt6_A Cell surface protein; l 98.3 4.6E-06 1.6E-10 87.7 14.0 90 113-205 255-344 (394)
321 1nbq_A JAM, junctional adhesio 98.3 2.1E-07 7.1E-12 87.6 3.3 82 263-349 116-201 (209)
322 2ec8_A MAST/stem cell growth f 98.3 8.6E-07 2.9E-11 96.6 8.6 90 263-357 322-413 (524)
323 1fnl_A Low affinity immunoglob 98.3 6.1E-07 2.1E-11 82.6 6.3 75 263-354 97-173 (175)
324 3u83_A Poliovirus receptor-rel 98.3 7.5E-07 2.6E-11 90.5 7.5 80 262-356 240-321 (331)
325 2p1m_B Transport inhibitor res 98.3 3.2E-07 1.1E-11 101.6 4.6 126 51-179 107-243 (594)
326 3sgj_C Human FCG3A receptor; r 98.3 1.2E-06 4E-11 83.3 7.9 79 255-354 8-87 (204)
327 1qz1_A Neural cell adhesion mo 98.3 1.9E-06 6.6E-11 85.6 9.8 92 256-354 4-98 (291)
328 2pet_A Lutheran blood group gl 98.3 6.5E-07 2.2E-11 85.8 6.0 84 256-341 120-211 (231)
329 1jbj_A CD3 epsilon and gamma e 98.3 6.5E-07 2.2E-11 83.6 5.8 62 265-345 118-179 (186)
330 2ocw_A Polymeric-immunoglobuli 98.3 2.1E-06 7.1E-11 94.8 10.8 95 261-357 449-548 (585)
331 3qs9_E FL cytokine receptor; i 98.3 1.2E-06 4.1E-11 96.0 8.8 81 263-356 335-415 (527)
332 3oq3_B IFN-alpha/beta binding 98.3 1.5E-06 5E-11 88.8 8.9 81 263-355 137-224 (329)
333 2oz4_A Intercellular adhesion 98.3 7.5E-07 2.6E-11 87.8 6.4 72 261-354 192-263 (265)
334 3ry4_A Low affinity immunoglob 98.3 7.8E-07 2.7E-11 81.1 6.0 74 263-353 94-169 (170)
335 3kld_A Contactin 4, axcam, BIG 98.3 1.4E-06 4.9E-11 91.0 8.8 83 261-356 212-295 (384)
336 1f2q_A High affinity immunoglo 98.3 9.3E-07 3.2E-11 81.4 6.4 79 255-354 5-84 (176)
337 1gsm_A Madcam-1, mucosal addre 98.3 1.9E-06 6.7E-11 82.2 8.8 81 262-357 15-97 (210)
338 3sbw_C Programmed cell death 1 98.3 1.8E-06 6.1E-11 82.2 8.5 85 265-356 127-212 (222)
339 3v2a_R Vascular endothelial gr 98.3 1.1E-07 3.9E-12 108.5 0.0 94 254-358 666-759 (772)
340 3bp6_B Programmed cell death 1 98.3 7.6E-07 2.6E-11 83.8 5.7 80 265-355 114-193 (202)
341 2oyp_A Hepatitis A virus cellu 98.3 1.5E-06 5.1E-11 73.1 7.0 92 263-355 3-108 (109)
342 3khq_A B-cell antigen receptor 98.3 1.5E-06 5.2E-11 76.7 7.3 92 256-354 19-116 (133)
343 4gjt_B Poliovirus receptor-rel 98.3 2.4E-06 8.1E-11 74.2 8.4 96 260-355 6-117 (123)
344 3mj8_L Stimulatory hamster ant 98.3 8.6E-07 2.9E-11 84.1 6.0 92 254-349 114-207 (213)
345 2wim_A N-CAM 2, NCAM2, neural 98.2 2.3E-06 7.9E-11 85.0 9.4 92 254-355 4-97 (291)
346 3p3y_A Neurofascin; IG domains 98.2 2E-06 6.9E-11 89.7 9.2 83 263-357 231-313 (404)
347 3q0h_A T cell immunoreceptor w 98.2 2.5E-06 8.6E-11 73.4 8.2 91 261-357 10-110 (117)
348 3laf_A Deleted in colorectal c 98.2 2.4E-06 8.3E-11 89.2 9.7 85 261-356 228-312 (403)
349 1nbq_A JAM, junctional adhesio 98.2 1.5E-06 5.2E-11 81.6 7.3 94 255-355 5-106 (209)
350 3o4o_C Interleukin-1 receptor 98.2 4.2E-07 1.4E-11 92.9 3.6 99 255-353 227-333 (339)
351 1ry7_B FGFR-3, fibroblast grow 98.2 8.4E-07 2.9E-11 90.4 5.8 85 264-356 133-217 (334)
352 2gi7_A GPVI protein; IG-like d 98.2 1.4E-06 4.7E-11 81.1 6.8 78 255-353 9-88 (184)
353 4fs7_A Uncharacterized protein 98.2 3.7E-06 1.3E-10 88.4 10.9 140 50-200 254-393 (394)
354 3sbw_C Programmed cell death 1 98.2 2.8E-06 9.5E-11 80.9 9.0 95 260-355 7-115 (222)
355 3oq3_B IFN-alpha/beta binding 98.2 2.8E-06 9.7E-11 86.6 9.6 90 260-353 234-328 (329)
356 2ec8_A MAST/stem cell growth f 98.2 3.9E-06 1.3E-10 91.4 11.0 99 254-356 211-310 (524)
357 3qs7_E FL cytokine receptor; i 98.2 4E-06 1.4E-10 89.1 10.9 88 262-355 235-323 (423)
358 1h5b_A Murine T cell receptor 98.2 2.6E-06 8.9E-11 72.6 7.7 84 259-343 6-95 (113)
359 3rjd_A High affinity immunoglo 98.2 2.4E-06 8.3E-11 83.4 8.5 79 255-354 2-81 (262)
360 2vsd_A CHIR AB1; immune system 98.2 1.2E-06 4E-11 74.0 5.3 74 255-342 6-79 (105)
361 1sy6_A T-cell surface glycopro 98.2 7.8E-07 2.7E-11 84.6 4.7 74 268-353 127-202 (204)
362 1q0x_L FAB 9B1, light chain; a 98.2 1.6E-06 5.6E-11 82.1 6.9 82 265-349 126-209 (212)
363 2r15_A Myomesin-1; sarcomeric 98.2 2.6E-06 8.9E-11 80.3 8.2 76 268-352 16-92 (212)
364 3nl4_L Antigen binding fragmen 98.2 1.8E-06 6.1E-11 81.8 7.1 96 256-354 3-109 (213)
365 2if7_A SLAM family member 6; N 98.2 2.9E-06 1E-10 79.6 8.5 89 261-355 5-106 (193)
366 1jbj_A CD3 epsilon and gamma e 98.2 1.1E-06 3.7E-11 82.1 5.3 69 265-353 10-79 (186)
367 3mj8_L Stimulatory hamster ant 98.2 3.7E-06 1.3E-10 79.6 9.1 94 257-354 4-108 (213)
368 1bih_A Hemolin; insect immunit 98.2 2.1E-06 7.1E-11 89.5 7.8 91 254-354 6-98 (395)
369 2d3v_A Leukocyte immunoglobuli 98.2 2E-06 6.9E-11 80.7 6.9 72 264-343 109-180 (196)
370 2y25_A Myomesin; structural pr 98.2 1.9E-06 6.4E-11 86.7 7.0 85 255-351 8-93 (317)
371 4hwn_A FC receptor-like A; FCR 98.2 1.4E-06 4.8E-11 73.9 5.1 71 255-343 9-84 (108)
372 3dmk_A DOWN syndrome cell adhe 98.2 2.1E-06 7.3E-11 98.8 8.1 95 255-356 715-810 (816)
373 4dep_C Interleukin-1 receptor 98.2 2.6E-06 9E-11 87.3 7.9 98 253-357 6-117 (349)
374 2v5m_A Dscam; neurobiology SPL 98.2 2.2E-06 7.7E-11 89.0 7.4 86 264-356 222-307 (388)
375 1ugn_A LIR1, leukocyte immunog 98.2 4.1E-06 1.4E-10 78.6 8.5 82 264-353 110-196 (198)
376 2d3v_A Leukocyte immunoglobuli 98.2 1.7E-06 5.9E-11 81.2 5.8 89 255-355 6-96 (196)
377 2wng_A Tyrosine-protein phosph 98.1 3.2E-06 1.1E-10 85.9 8.0 82 266-351 232-316 (327)
378 1xt5_A Variable region-contain 98.1 3.2E-06 1.1E-10 74.1 7.0 92 259-354 9-132 (135)
379 1q9r_B S25-2 FAB (IGG1K) heavy 98.1 1.9E-06 6.5E-11 82.4 5.9 78 265-349 138-217 (222)
380 1ncn_A T lymphocyte activation 98.1 9.6E-06 3.3E-10 68.5 9.6 85 263-352 3-102 (110)
381 3s96_B 3B5H10 FAB light chain; 98.1 4.7E-06 1.6E-10 79.1 8.5 94 257-354 4-115 (218)
382 3o4o_C Interleukin-1 receptor 98.1 2.2E-06 7.5E-11 87.5 6.6 93 255-356 19-118 (339)
383 2j6e_L IGM, FAB light chain; a 98.1 1.7E-06 5.9E-11 83.2 5.5 81 266-349 147-229 (234)
384 2or8_A Hepatitis A virus cellu 98.1 5.4E-06 1.8E-10 70.6 8.0 92 261-353 4-109 (116)
385 1nfd_E H57 FAB; complex (immun 98.1 6.1E-07 2.1E-11 85.1 2.1 89 255-347 114-204 (212)
386 3mj6_A Junctional adhesion mol 98.1 3.1E-06 1E-10 83.2 7.2 95 261-356 125-238 (268)
387 1z7z_I Intercellular adhesion 98.1 1.7E-06 5.8E-11 92.1 5.7 71 262-354 378-448 (450)
388 1neu_A Myelin P0 protein; stru 98.1 4.2E-06 1.4E-10 72.1 7.2 95 261-356 6-120 (124)
389 3tv3_L PGT128 light chain, IG 98.1 1.5E-06 5.3E-11 82.2 4.7 92 255-349 112-205 (211)
390 3ry4_A Low affinity immunoglob 98.1 4E-06 1.4E-10 76.2 7.3 78 256-354 6-84 (170)
391 2ywz_A NEW antigen receptor va 98.1 3.8E-06 1.3E-10 71.4 6.7 80 259-341 5-88 (111)
392 3d9a_L Light chain of hyhel10 98.1 1.7E-06 5.8E-11 81.9 5.0 90 255-346 113-204 (213)
393 2q20_A VK1 O18/O8 germline lig 98.1 5E-06 1.7E-10 70.4 7.4 83 256-341 5-95 (109)
394 1zox_A CLM-1; IG-superfamily, 98.1 9.4E-06 3.2E-10 69.0 9.1 94 261-355 8-110 (113)
395 1ugn_A LIR1, leukocyte immunog 98.1 3.4E-06 1.2E-10 79.2 6.9 89 255-355 6-97 (198)
396 1qfw_M FV, antibody (anti beta 98.1 7.7E-06 2.6E-10 69.0 8.3 81 258-341 5-93 (108)
397 3p2t_A Leukocyte immunoglobuli 98.1 3.4E-06 1.2E-10 79.0 6.5 70 265-343 110-179 (196)
398 3r0n_A Poliovirus receptor-rel 98.1 7.3E-06 2.5E-10 71.3 8.1 92 260-353 8-128 (128)
399 2fbo_J V1V2;, variable region- 98.1 3.2E-06 1.1E-10 81.9 6.4 90 260-353 8-129 (250)
400 1lk3_L 9D7 light chain; antige 98.1 2.6E-06 8.8E-11 80.7 5.4 89 255-345 112-202 (210)
401 3eow_R Poliovirus receptor; im 98.1 3.9E-06 1.3E-10 80.1 6.7 81 267-353 128-210 (221)
402 3d9a_L Light chain of hyhel10 98.1 5.3E-06 1.8E-10 78.5 7.6 92 259-353 6-106 (213)
403 1dr9_A B7-1 (CD80), T lymphocy 98.1 1.1E-05 3.6E-10 75.7 9.6 77 267-351 119-197 (201)
404 3s96_B 3B5H10 FAB light chain; 98.1 2.8E-06 9.4E-11 80.7 5.5 91 255-349 122-214 (218)
405 3r4d_A CEA-related cell adhesi 98.1 7.4E-06 2.5E-10 77.0 8.4 88 262-355 7-108 (208)
406 2rgs_A I, IG gamma-2B heavy ch 98.1 4E-06 1.4E-10 80.3 6.5 89 253-345 8-102 (218)
407 2pet_A Lutheran blood group gl 98.1 3.7E-06 1.3E-10 80.4 6.2 91 260-356 6-115 (231)
408 3dmk_A DOWN syndrome cell adhe 98.1 1.2E-05 4.3E-10 92.4 11.7 98 255-356 430-527 (816)
409 1ccz_A Protein (CD58); LFA-3, 98.1 5.1E-06 1.8E-10 76.5 6.8 85 263-355 4-94 (171)
410 1uct_A Immunoglobulin alpha FC 98.1 3.1E-06 1.1E-10 81.3 5.5 87 255-353 10-100 (218)
411 1itb_B Type 1 interleukin-1 re 98.1 2.1E-05 7.3E-10 79.1 12.0 70 264-345 113-189 (315)
412 1hnf_A CD2; T lymphocyte adhes 98.1 5E-06 1.7E-10 77.6 6.7 88 262-355 7-104 (182)
413 2wng_A Tyrosine-protein phosph 98.1 6.5E-06 2.2E-10 83.6 8.1 100 257-356 6-116 (327)
414 1c1e_H Catalytic antibody 1E9 98.0 2.6E-06 8.8E-11 81.3 4.7 80 264-350 134-215 (219)
415 1mqk_L Antibody 7E2 FV fragmen 98.0 8.8E-06 3E-10 70.3 7.7 82 258-342 5-94 (120)
416 4fmk_A Poliovirus receptor-rel 98.0 7.1E-06 2.4E-10 77.4 7.6 85 263-353 130-215 (225)
417 3pv7_A B7-H6, IG-like domain-c 98.0 1E-05 3.6E-10 78.6 8.9 88 266-353 130-224 (248)
418 2ra8_A Uncharacterized protein 98.0 1.8E-06 6E-11 89.8 3.4 132 73-208 170-320 (362)
419 2d9c_A Signal-regulatory prote 98.0 9.4E-06 3.2E-10 71.6 7.7 101 256-357 10-123 (136)
420 2xzc_L FAB A.17 light chain; i 98.0 5.5E-06 1.9E-10 78.7 6.5 78 267-346 127-206 (216)
421 1i8k_A Epidermal growth factor 98.0 8E-06 2.7E-10 68.8 6.8 81 258-341 5-93 (107)
422 2gi7_A GPVI protein; IG-like d 98.0 6.7E-06 2.3E-10 76.3 6.9 67 263-343 102-168 (184)
423 2ghw_B Anti-SARS SCFV antibody 98.0 1.2E-05 4E-10 78.1 8.8 94 257-353 138-240 (247)
424 2e27_L Anti-ciguatoxin antibod 98.0 8.3E-06 2.8E-10 70.4 6.8 82 257-341 6-95 (119)
425 2ra8_A Uncharacterized protein 98.0 4.3E-06 1.5E-10 86.9 5.9 129 51-185 174-321 (362)
426 1cs6_A Axonin-1; neural cell a 98.0 8.6E-06 2.9E-10 84.5 8.1 81 261-356 214-294 (382)
427 2ptt_A CD48 antigen; CD244, CD 98.0 1.2E-05 4.2E-10 67.9 7.7 87 262-354 11-107 (110)
428 1vca_A VCAM-D1,2, human vascul 98.0 1.1E-05 3.9E-10 76.2 8.2 89 264-357 101-199 (202)
429 3s97_C Contactin-1; carbonic a 98.0 5.7E-06 2E-10 77.0 6.1 78 261-347 15-94 (201)
430 1wio_A CD4, T-cell surface gly 98.0 1E-05 3.5E-10 83.5 8.6 93 262-354 184-292 (363)
431 3rrq_A Protein PD-1, programme 98.0 9E-06 3.1E-10 71.2 7.0 99 259-358 6-118 (129)
432 1lk3_L 9D7 light chain; antige 98.0 1E-05 3.4E-10 76.5 7.8 90 261-353 7-105 (210)
433 3d9a_H Heavy chain of hyhel10 98.0 3.8E-06 1.3E-10 79.5 4.8 78 264-348 128-207 (210)
434 3pv7_A B7-H6, IG-like domain-c 98.0 1.4E-05 4.7E-10 77.7 8.9 96 261-356 10-119 (248)
435 2if7_A SLAM family member 6; N 98.0 1.1E-05 3.8E-10 75.6 8.0 62 268-349 122-186 (193)
436 1i3g_L Antibody FV fragment; a 98.0 1.2E-05 4.1E-10 68.3 7.4 84 255-341 5-96 (111)
437 3r06_A Anti-mouse CD3epsilon a 98.0 1.2E-05 4E-10 76.1 8.2 95 256-353 3-106 (213)
438 2coq_A NEW antigen receptor va 98.0 6.4E-06 2.2E-10 69.6 5.5 79 259-340 5-87 (108)
439 1uct_A Immunoglobulin alpha FC 98.0 8.7E-06 3E-10 78.1 7.1 81 263-356 114-199 (218)
440 1oll_A NK receptor; immune sys 98.0 5E-06 1.7E-10 77.5 5.3 77 263-353 107-186 (188)
441 1sq2_N Novel antigen receptor; 98.0 8.4E-06 2.9E-10 69.6 6.3 80 259-341 5-88 (113)
442 1oll_A NK receptor; immune sys 98.0 1.1E-05 3.7E-10 75.2 7.5 88 255-354 5-94 (188)
443 1moe_A Anti-CEA MAB T84.66; an 98.0 9.3E-06 3.2E-10 78.4 7.3 94 257-353 4-110 (240)
444 1e07_A Carcinoembryonic antige 98.0 8E-06 2.7E-10 91.2 7.8 72 262-353 389-460 (642)
445 1nkr_A P58-CL42 KIR; inhibitor 98.0 1.4E-05 4.9E-10 75.1 8.4 90 255-354 9-103 (201)
446 4dzb_B Vbeta2 (MAIT T cell rec 98.0 1.3E-05 4.5E-10 77.7 8.3 82 257-343 4-101 (246)
447 2rcj_C Light chain; immunoglob 98.0 1.1E-05 3.8E-10 87.7 8.6 94 255-351 115-210 (523)
448 2x1w_L Vascular endothelial gr 98.0 8E-06 2.7E-10 77.7 6.5 80 261-353 14-99 (213)
449 3qs9_E FL cytokine receptor; i 98.0 1.6E-05 5.6E-10 86.9 9.7 83 262-354 56-138 (527)
450 3mjg_X Beta-type platelet-deri 98.0 1.3E-05 4.6E-10 79.5 8.1 75 256-344 2-76 (289)
451 3sob_L Antibody light chain; b 98.0 6.9E-06 2.4E-10 78.9 5.8 92 255-348 136-229 (237)
452 4frw_A Poliovirus receptor-rel 98.0 1.4E-05 4.9E-10 74.9 7.9 88 261-348 6-108 (218)
453 2c1o_A IGK-C protein; FAB frag 98.0 1.3E-05 4.4E-10 78.2 7.8 88 254-344 38-138 (254)
454 3moq_A NEW antigen receptor va 97.9 8.3E-06 2.8E-10 71.2 5.6 84 257-343 3-90 (126)
455 2q87_A CMRF35-H antigen; all-b 97.9 1.8E-05 6.1E-10 66.9 7.6 82 261-343 3-93 (110)
456 4fmk_A Poliovirus receptor-rel 97.9 2.6E-05 8.8E-10 73.5 9.5 89 261-349 8-113 (225)
457 3rjd_A High affinity immunoglo 97.9 1.2E-05 4E-10 78.4 7.2 78 261-355 89-167 (262)
458 3auv_A SC-DSFV derived from th 97.9 1.5E-05 5E-10 79.2 8.0 97 254-353 12-117 (276)
459 1pz5_B Heavy chain of FAB (SYA 97.9 8.3E-06 2.9E-10 77.8 5.8 80 265-351 136-217 (220)
460 2c1o_A IGK-C protein; FAB frag 97.9 6.3E-06 2.2E-10 80.5 5.0 89 255-345 155-245 (254)
461 3tv3_L PGT128 light chain, IG 97.9 1.8E-05 6.3E-10 74.6 8.1 90 259-354 6-105 (211)
462 1io0_A Tropomodulin; LRR prote 97.9 1.7E-06 5.9E-11 81.0 0.8 112 73-184 34-164 (185)
463 2p1y_A Bispecific alpha/beta T 97.9 1.1E-05 3.9E-10 77.7 6.7 85 257-342 130-222 (238)
464 2rcj_C Light chain; immunoglob 97.9 1.6E-05 5.6E-10 86.3 8.6 84 264-353 229-314 (523)
465 3mj6_A Junctional adhesion mol 97.9 1.2E-05 4.2E-10 78.8 6.9 96 257-353 8-120 (268)
466 2vol_A Murine IGG FC; FC, zinc 97.9 9.8E-06 3.4E-10 76.8 5.9 76 266-345 15-94 (207)
467 2jju_A Signal regulatory prote 97.9 1.7E-05 5.8E-10 69.1 6.9 83 259-342 8-97 (127)
468 2zg1_A Sialic acid-binding IG- 97.9 1.3E-05 4.4E-10 75.8 6.6 73 266-353 135-213 (214)
469 1dee_B IGM RF 2A2; FAB-IBP com 97.9 3.8E-05 1.3E-09 73.6 10.0 80 265-349 137-221 (223)
470 3u83_A Poliovirus receptor-rel 97.9 2.5E-05 8.4E-10 79.1 9.1 90 261-357 139-232 (331)
471 3ejj_X Macrophage colony-stimu 97.9 1.8E-05 6E-10 78.5 7.8 82 261-354 96-180 (289)
472 2o26_X MAST/stem cell growth f 97.9 2.5E-05 8.5E-10 77.6 8.8 80 254-356 12-91 (290)
473 1hnf_A CD2; T lymphocyte adhes 97.9 1.1E-05 3.8E-10 75.2 5.8 65 269-353 115-179 (182)
474 1dr9_A B7-1 (CD80), T lymphocy 97.9 6.4E-06 2.2E-10 77.2 4.1 88 263-354 3-105 (201)
475 3nl4_L Antigen binding fragmen 97.9 9.9E-06 3.4E-10 76.6 5.4 84 254-339 114-198 (213)
476 1i1c_A IGG2A, IG gamma-2A chai 97.9 1.4E-05 4.6E-10 78.0 6.4 76 266-345 29-108 (239)
477 3sob_L Antibody light chain; b 97.9 2.4E-05 8.1E-10 75.1 8.1 97 255-354 25-130 (237)
478 3r06_A Anti-mouse CD3epsilon a 97.9 1.1E-05 3.7E-10 76.3 5.5 91 254-346 112-204 (213)
479 2znx_A SCFV; fluorotryptohpan, 97.9 2.9E-05 1E-09 75.4 8.7 94 257-353 4-106 (242)
480 1f3r_B FV antibody fragment; I 97.9 1.4E-05 4.9E-10 78.3 6.5 81 259-342 144-232 (257)
481 1j05_L T84.66 antibody, anti-C 97.9 2.4E-05 8.2E-10 66.2 6.9 81 258-341 5-97 (111)
482 3umt_A SCFV heavy chain and li 97.9 2.7E-05 9.3E-10 76.2 8.2 99 255-356 139-246 (256)
483 2y23_A Myomesin; structural pr 97.9 3.7E-05 1.3E-09 76.9 9.4 75 263-344 116-191 (312)
484 2ocw_A Polymeric-immunoglobuli 97.9 2.9E-05 9.8E-10 85.5 9.3 103 254-356 112-222 (585)
485 3esu_F Antibody 14B7* light ch 97.9 1.6E-05 5.6E-10 77.2 6.5 96 255-353 5-109 (250)
486 3b5h_A Cervical EMMPRIN, HAB18 97.9 2.1E-05 7.1E-10 72.4 6.9 72 264-354 8-81 (184)
487 2yz1_A Tyrosine-protein phosph 97.8 8.9E-06 3E-10 69.9 4.0 86 256-342 9-101 (120)
488 2w59_A IGY FCU3-4; immunoglobu 97.8 1.7E-05 5.9E-10 76.6 6.4 82 260-346 19-104 (231)
489 2or7_A T-cell immunoglobulin a 97.8 2.4E-05 8.3E-10 66.6 6.7 93 261-354 4-109 (115)
490 1l6x_A Immunoglobulin gamma-1 97.8 1.8E-05 6.3E-10 74.8 6.5 75 267-345 16-94 (207)
491 4ffy_L DENV1-E111 single chain 97.8 3.5E-05 1.2E-09 67.0 7.8 96 257-355 4-112 (126)
492 1c1e_H Catalytic antibody 1E9 97.8 2.2E-05 7.4E-10 74.7 6.9 82 261-343 7-103 (219)
493 1io0_A Tropomodulin; LRR prote 97.8 3.1E-06 1.1E-10 79.2 0.9 117 92-208 29-164 (185)
494 2fbj_H IGA-kappa J539 FAB (hea 97.8 2.3E-05 7.7E-10 75.0 7.0 77 265-346 133-212 (220)
495 3bkj_L WO2 IGG2A FAB fragment 97.8 3.7E-05 1.3E-09 75.0 8.3 95 256-353 36-144 (252)
496 3omz_A Human vdelta1 gamma del 97.8 2.6E-05 9E-10 76.4 7.3 98 256-354 4-117 (259)
497 1igt_B IGG2A intact antibody - 97.8 2.5E-05 8.5E-10 83.0 7.6 77 266-346 252-332 (444)
498 2vol_A Murine IGG FC; FC, zinc 97.8 2.2E-05 7.4E-10 74.4 6.4 74 267-344 122-197 (207)
499 1nqb_A Single-chain antibody f 97.8 3.7E-05 1.3E-09 75.4 8.2 97 255-354 122-232 (256)
500 1mju_H Immunoglobulin MS6-12; 97.8 1.3E-05 4.3E-10 77.3 4.6 82 265-353 132-215 (227)
No 1
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=100.00 E-value=6.9e-42 Score=369.63 Aligned_cols=329 Identities=33% Similarity=0.556 Sum_probs=248.2
Q ss_pred CCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcc
Q psy1672 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93 (600)
Q Consensus 14 ~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~ 93 (600)
...||..|.|... ...++|.+.+|+.+|..++.. ++.|+|++|+|+.++...|. ++.+|+.|+|++|.|..+.+.
T Consensus 32 ~~~Cp~~C~C~~~--~~~v~c~~~~l~~iP~~~~~~-l~~L~L~~n~i~~~~~~~~~--~l~~L~~L~Ls~n~i~~i~~~ 106 (440)
T 3zyj_A 32 AQTCPSVCSCSNQ--FSKVICVRKNLREVPDGISTN-TRLLNLHENQIQIIKVNSFK--HLRHLEILQLSRNHIRTIEIG 106 (440)
T ss_dssp -CCCCSSSEECTT--SCEEECCSCCCSSCCSCCCTT-CSEEECCSCCCCEECTTTTS--SCSSCCEEECCSSCCCEECGG
T ss_pred cccCCCCCEeCCC--CCEEEeCCCCcCcCCCCCCCC-CcEEEccCCcCCeeCHHHhh--CCCCCCEEECCCCcCCccChh
Confidence 3589999999854 357999999999999988876 89999999999888877776 788888888888888887777
Q ss_pred ccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCc---------------------------------
Q psy1672 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEK--------------------------------- 140 (600)
Q Consensus 94 ~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~--------------------------------- 140 (600)
+|.++++|++|+|++|.|+.++...|..+++|++|+|++|.++.+..
T Consensus 107 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~ 186 (440)
T 3zyj_A 107 AFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSN 186 (440)
T ss_dssp GGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSS
T ss_pred hccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccc
Confidence 77777777777777777777776666666666666666665544332
Q ss_pred --------------------------------------ccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCc
Q psy1672 141 --------------------------------------GAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNR 182 (600)
Q Consensus 141 --------------------------------------~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~ 182 (600)
..|..+++|+.|+|++|+|..+.+..|.++++|+.|+|++|+
T Consensus 187 L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 266 (440)
T 3zyj_A 187 LRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNN 266 (440)
T ss_dssp CCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSC
T ss_pred cCeecCCCCcCccccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCC
Confidence 223333334444444444444445556667788888888888
Q ss_pred CCCCCcccccccccccEEEccCCcCccccccccchhhhcccCCCC--CCCCCCCCccccccccccccccccCcc-ccccc
Q psy1672 183 LSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVP--VQPACTGPERLSGKVFSDLHADDFACK-PEIRM 259 (600)
Q Consensus 183 l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~--~~~~C~~p~~l~g~~l~~l~~~~~~C~-p~i~~ 259 (600)
|+.++...|..+++|+.|++.+|||.|||++.|+..|+.+..... ....|..|..+.|+.+..++...+.|. |.+..
T Consensus 267 l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~~~~~~~~~~~~~~C~~P~~l~g~~l~~l~~~~~~C~~P~i~~ 346 (440)
T 3zyj_A 267 LTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVE 346 (440)
T ss_dssp CCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHHHHHHTTSCSSCSCCCBEEESTTTTTCBCC----CCSCCCCCCEEE
T ss_pred CCccChhHhccccCCCEEEcCCCCccCCCCchHHHHHHHhccccCCccccCCCChhHhcCccHhHhhhhhccCCCCcccc
Confidence 888888888889999999999999999999999999998543222 346899999999999999999999995 55556
Q ss_pred ccccccccccccceeeeEeecCCCCeeEEEEc-CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
.+..+.+.+|+.++|.|.+ +.|.|.+.|+++ +..+.... ...++.+..++ .|.|.+++.+|+|.|+|+|
T Consensus 347 ~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~---~~~~~~~~~~~------~L~I~~v~~~D~G~Y~C~a 416 (440)
T 3zyj_A 347 PPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGA---YKVRIAVLSDG------TLNFTNVTVQDTGMYTCMV 416 (440)
T ss_dssp CCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSS---CCSSEEECTTC------CEEESSCCSTTCEEEEEEE
T ss_pred cccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccC---CCceEEEccCC------eEEEccCChhhCEEEEEEE
Confidence 6778889999999999999 679999999994 44433221 12344444444 6999999999999999999
Q ss_pred ecCCCceeEEEEEEEEEcc
Q psy1672 339 ENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 339 ~N~~G~~~~~v~L~V~~~~ 357 (600)
+|.+|.+++++.+.|.+.+
T Consensus 417 ~N~~G~~~~~~~~~v~~~~ 435 (440)
T 3zyj_A 417 SNSVGNTTASATLNVTGTH 435 (440)
T ss_dssp ECSSCEEEEEEEEEEC---
T ss_pred EcCCCcEEEEEEEEEeccc
Confidence 9999999999999886543
No 2
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=100.00 E-value=9.1e-42 Score=369.96 Aligned_cols=328 Identities=33% Similarity=0.575 Sum_probs=252.3
Q ss_pred CCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcc
Q psy1672 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93 (600)
Q Consensus 14 ~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~ 93 (600)
...||..|.|.+. ...++|.+.+++.+|..++.. +++|+|++|+|+.++...|. ++.+|+.|+|++|.|+.+.+.
T Consensus 43 ~~~Cp~~C~C~~~--~~~v~c~~~~l~~iP~~~~~~-l~~L~L~~n~i~~~~~~~~~--~l~~L~~L~Ls~n~i~~~~~~ 117 (452)
T 3zyi_A 43 PQNCPSVCSCSNQ--FSKVVCTRRGLSEVPQGIPSN-TRYLNLMENNIQMIQADTFR--HLHHLEVLQLGRNSIRQIEVG 117 (452)
T ss_dssp -CCCCTTSEECSS--SCEEECCSSCCSSCCSCCCTT-CSEEECCSSCCCEECTTTTT--TCTTCCEEECCSSCCCEECTT
T ss_pred cCCCCCCCEECCC--CcEEEECCCCcCccCCCCCCC-ccEEECcCCcCceECHHHcC--CCCCCCEEECCCCccCCcChh
Confidence 3489999999854 357999999999999988876 99999999999988877776 788888888888888888777
Q ss_pred ccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCc---------------------------------
Q psy1672 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEK--------------------------------- 140 (600)
Q Consensus 94 ~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~--------------------------------- 140 (600)
+|.++++|++|+|++|.|+.++...|..+++|++|+|++|.++.++.
T Consensus 118 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~ 197 (452)
T 3zyi_A 118 AFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFN 197 (452)
T ss_dssp TTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTT
T ss_pred hccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCC
Confidence 77777788888887777777776666666666666666665554433
Q ss_pred --------------------------------------ccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCc
Q psy1672 141 --------------------------------------GAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNR 182 (600)
Q Consensus 141 --------------------------------------~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~ 182 (600)
..|..+++|+.|+|++|++..+.+..|.++++|+.|+|++|+
T Consensus 198 L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 277 (452)
T 3zyi_A 198 LKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNN 277 (452)
T ss_dssp CCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCEEECCCCcccccccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCc
Confidence 223333444444444444445555566677888888888888
Q ss_pred CCCCCcccccccccccEEEccCCcCccccccccchhhhcccCCCC--CCCCCCCCccccccccccccccccCcc-ccccc
Q psy1672 183 LSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVP--VQPACTGPERLSGKVFSDLHADDFACK-PEIRM 259 (600)
Q Consensus 183 l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~--~~~~C~~p~~l~g~~l~~l~~~~~~C~-p~i~~ 259 (600)
|+.++...|..+++|+.|++.+|+|.|+|++.|+..|+.+..... ....|..|..+.|+.+..++...+.|. |.+..
T Consensus 278 l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~l~~~l~~~~~~~~~~~~~C~~P~~l~g~~l~~~~~~~~~C~~P~i~~ 357 (452)
T 3zyi_A 278 LSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMD 357 (452)
T ss_dssp CSCCCTTSSTTCTTCCEEECCSSCEECSTTTHHHHHHHHHHC---CCSSCBEEESTTTTTCBTTSCCGGGCCCCCCCCSB
T ss_pred CCccChHHhccccCCCEEEccCCCcCCCCCchHHHHHHHHhCccCCccCcEeCCchHhccchhhccchhhhcccCccccc
Confidence 888888888889999999999999999999999999988543221 346899999999999999998899995 55555
Q ss_pred ccccccccccccceeeeEeecCCCCeeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
.+..+.+.+|+.++|.|.+. |.|+|.|++ ++..+.... ...++.+..++ .|.|.+++.+|+|.|+|+|
T Consensus 358 ~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~---~~~~~~~~~~g------~L~i~~v~~~D~G~Y~C~a 426 (452)
T 3zyi_A 358 APRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHAS---RHPRISVLNDG------TLNFSHVLLSDTGVYTCMV 426 (452)
T ss_dssp CCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSC---CCSSCEECTTS------CEECSSCCTTCCEEEEEEE
T ss_pred ccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCC---CCCCEEECCCC------eEEEeecCHHHCEEEEEEE
Confidence 67778899999999999998 999999999 444443321 12244444444 7999999999999999999
Q ss_pred ecCCCceeEEEEEEEEEcc
Q psy1672 339 ENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 339 ~N~~G~~~~~v~L~V~~~~ 357 (600)
+|.+|.+++++.|.|...+
T Consensus 427 ~N~~G~~~~~~~l~v~~~~ 445 (452)
T 3zyi_A 427 TNVAGNSNASAYLNVSTAG 445 (452)
T ss_dssp ECSSCEEEEEEEEEC----
T ss_pred EcCCCcEEEEEEEEEEccc
Confidence 9999999999999986544
No 3
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=100.00 E-value=1.6e-40 Score=349.69 Aligned_cols=319 Identities=26% Similarity=0.410 Sum_probs=270.0
Q ss_pred cCCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCc
Q psy1672 13 SVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS 92 (600)
Q Consensus 13 ~~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~ 92 (600)
+...||..|.|.+ .+++|.+++|+.+|..++.. ++.|+|++|+|+.++...|. .++.+|+.|+|++|+|+.+.+
T Consensus 8 ~~~~Cp~~C~C~~----~~l~c~~~~l~~iP~~~~~~-l~~L~Ls~N~l~~l~~~~~~-~~l~~L~~L~L~~N~i~~i~~ 81 (361)
T 2xot_A 8 SVVSCPANCLCAS----NILSCSKQQLPNVPQSLPSY-TALLDLSHNNLSRLRAEWTP-TRLTNLHSLLLSHNHLNFISS 81 (361)
T ss_dssp CCTTCCTTCEEET----TEEECCSSCCSSCCSSCCTT-CSEEECCSSCCCEECTTSSS-SCCTTCCEEECCSSCCCEECT
T ss_pred cCCCCCCCCEECC----CEEEeCCCCcCccCccCCCC-CCEEECCCCCCCccChhhhh-hcccccCEEECCCCcCCccCh
Confidence 4568999999984 57999999999999988876 99999999999999988773 158999999999999999999
Q ss_pred cccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhh---cC
Q psy1672 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF---TG 169 (600)
Q Consensus 93 ~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~---~~ 169 (600)
.+|.++++|++|+|++|.|+.+++..|..+++|+.|+|++|.|+.+.+..|..+++|+.|+|++|+|+.++...| ..
T Consensus 82 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~ 161 (361)
T 2xot_A 82 EAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNK 161 (361)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----
T ss_pred hhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCccc
Confidence 999999999999999999999999899999999999999999999999999999999999999999999988877 56
Q ss_pred CCCCCEEEcCCCcCCCCCccccccccc--ccEEEccCCcCccccccccc-hhhhcccC----CCCCCCCCCCCccccccc
Q psy1672 170 AKSLESIKLNGNRLSHFPVRSVEPLLK--LMMIELHDNPWVCDCNMRSI-KMWLADKK----NVPVQPACTGPERLSGKV 242 (600)
Q Consensus 170 l~~L~~L~Ls~N~l~~l~~~~~~~l~~--L~~L~l~~N~~~C~C~l~~l-~~w~~~~~----~~~~~~~C~~p~~l~g~~ 242 (600)
+++|+.|+|++|.|+.++...+..++. ++.|++.+|+|.|+|.+.|+ ..|..... .......|..|..+.+.
T Consensus 162 l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~~~~~~~~~~~~~~~~~~~~~~C~~p~~~~~~- 240 (361)
T 2xot_A 162 LPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCMHSKKLHNI- 240 (361)
T ss_dssp CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHHHHHHHHHHHTTCHHHHTTGGGCEEESSSCCEEG-
T ss_pred CCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCcHHHHHHHHHhcCCchhccCcCCEeCCChHHcCc-
Confidence 999999999999999999888888776 48899999999999999986 67876432 12246789988766432
Q ss_pred cccccccccCcccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEE
Q psy1672 243 FSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLV 322 (600)
Q Consensus 243 l~~l~~~~~~C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~ 322 (600)
. ....+.|.+ ..+..+++.+|+.++|.|.+.| |.|.|.|++++..+.... ....++.+ .++ .|.
T Consensus 241 -~--~~~~~~C~~---~~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~--~~~~r~~~-~~~------~L~ 304 (361)
T 2xot_A 241 -F--SLDFFNCSE---YKESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQ--GSNGSVSV-RNG------DLF 304 (361)
T ss_dssp -G--GCCCTTCCS---CCCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSC--CSSSSEEE-ETT------EEE
T ss_pred -c--ccccccCCC---ccccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeec--ccCCceEe-ecC------eEE
Confidence 2 223667876 3355678899999999999999 999999999665443222 11234444 444 799
Q ss_pred EecCCCCCCeEEEEEEecCCCceeEEEEEEEE
Q psy1672 323 LTNAQESDSGRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 323 I~~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|.+++.+|+|.|+|+|.|..|.++..+.+.|.
T Consensus 305 I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 336 (361)
T 2xot_A 305 FKKVQVEDGGVYTCYAMGETFNETLSVELKVY 336 (361)
T ss_dssp ESSCCTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EeecCcccCEEEEEEEecCCCccEEEEEEEEE
Confidence 99999999999999999999999999888884
No 4
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.4e-38 Score=340.45 Aligned_cols=326 Identities=29% Similarity=0.483 Sum_probs=235.8
Q ss_pred CCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccc
Q psy1672 15 SSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGA 94 (600)
Q Consensus 15 ~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~ 94 (600)
.+||..|.|... ...++|.+.+++.+|..++.. +++|+|++|+|+.++...|. .+.+|+.|+|++|.++.+.+.+
T Consensus 1 ~~Cp~~C~C~~~--~~~v~c~~~~l~~ip~~~~~~-l~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~i~~~~~~~ 75 (477)
T 2id5_A 1 TGCPPRCECSAQ--DRAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEFA--SFPHLEELELNENIVSAVEPGA 75 (477)
T ss_dssp CCCSTTCEEETT--TTEEECCSCCCSSCCSCCCTT-CSEEECCSSCCCEECTTTTT--TCTTCCEEECTTSCCCEECTTT
T ss_pred CcccCCCeECCC--CCEEEeCCCCcCcCCCCCCCC-CcEEECCCCccceECHhHcc--CCCCCCEEECCCCccCEeChhh
Confidence 379999999743 367999999999999988776 99999999999998877776 7888888888888888887777
Q ss_pred cCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcc------------------------cccCCC---
Q psy1672 95 LDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKG------------------------AFQFVP--- 147 (600)
Q Consensus 95 f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~------------------------~~~~l~--- 147 (600)
|.++++|++|+|++|.|+.++...|..+++|++|+|++|.+..+.+. .|..++
T Consensus 76 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 155 (477)
T 2id5_A 76 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155 (477)
T ss_dssp TTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCC
T ss_pred hhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCC
Confidence 88888888888888887777766666666666666665554433222 222222
Q ss_pred --------------------------------------------------------------------------------
Q psy1672 148 -------------------------------------------------------------------------------- 147 (600)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (600)
T Consensus 156 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 156 QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp EEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSC
T ss_pred EEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCc
Confidence
Q ss_pred -------------CcceeeCCCCcCcccC------------------------hhhhcCCCCCCEEEcCCCcCCCCCccc
Q psy1672 148 -------------GLVKLDMSESRLEHIS------------------------PEAFTGAKSLESIKLNGNRLSHFPVRS 190 (600)
Q Consensus 148 -------------~L~~L~Ls~n~l~~i~------------------------~~~~~~l~~L~~L~Ls~N~l~~l~~~~ 190 (600)
+|+.|+|++|.+..+. +..|..+++|+.|+|++|.|+.++...
T Consensus 236 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 236 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp CCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGG
T ss_pred ccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhH
Confidence 2222222222222221 223334455666666666666666667
Q ss_pred ccccccccEEEccCCcCccccccccchhhhcccCCCCCCCCCCCCccccccccccccc----cccCccc-ccccc-cccc
Q psy1672 191 VEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHA----DDFACKP-EIRMD-SRYV 264 (600)
Q Consensus 191 ~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~~~~~C~~p~~l~g~~l~~l~~----~~~~C~p-~i~~~-~~~~ 264 (600)
|..+++|+.|++.+|+|.|+|.+.|+..|............|..|..+.|+.+.++.. +.+.|.+ .+... +..+
T Consensus 316 ~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~~~g~~l~~~~~~~~~~~~~C~~P~i~~~~~~~~ 395 (477)
T 2id5_A 316 FHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQV 395 (477)
T ss_dssp BSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGGGTTCBGGGSCSSCCTTSSCCEEEEESCCSCEEE
T ss_pred cCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCchHHcCCchhhCccccccceeEeccccccccccccE
Confidence 7778899999999999999999999888765222222467899999999999877654 3577853 33332 4677
Q ss_pred cccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCc
Q psy1672 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGI 344 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~ 344 (600)
.+.+|+.+++.|.+.|.|.|.|.|+++++.+.... ...++.+..++ .|.|.+++.+|+|.|+|+|.|..|.
T Consensus 396 ~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~---~~~~~~~~~~~------~L~i~~v~~~d~G~Y~C~a~N~~g~ 466 (477)
T 2id5_A 396 FVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAK---SNGRLTVFPDG------TLEVRYAQVQDNGTYLCIAANAGGN 466 (477)
T ss_dssp EEETTCCEEECCCEEEESCCEEEEECTTSCBC----------CEECTTS------CEEESSCCSTTCEEEEEEEEETTEE
T ss_pred EEeCCCeEEEEEeccccCCCEEEEEECCccccccC---CCceEEeCCCC------EEEEeeCChHHCEEEEEEEEeCCCc
Confidence 88999999999999999999999999887654321 12233333333 7999999999999999999999999
Q ss_pred eeEEEEEEEE
Q psy1672 345 ADANFTLQVT 354 (600)
Q Consensus 345 ~~~~v~L~V~ 354 (600)
+++.+.+.|.
T Consensus 467 ~~~~~~l~V~ 476 (477)
T 2id5_A 467 DSMPAHLHVR 476 (477)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEe
Confidence 9888888774
No 5
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.96 E-value=2.4e-29 Score=245.65 Aligned_cols=212 Identities=25% Similarity=0.511 Sum_probs=160.8
Q ss_pred CCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcc
Q psy1672 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93 (600)
Q Consensus 14 ~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~ 93 (600)
...||..|.|.+ ..++|.+.+++.+|..++.. ++.|+|++|.|+.++...|. .+.+|+.|+|++|.|+.+.+.
T Consensus 2 ~~~CP~~C~C~~----~~v~c~~~~l~~iP~~l~~~-l~~L~l~~n~i~~i~~~~~~--~l~~L~~L~Ls~N~i~~~~~~ 74 (220)
T 2v9t_B 2 SLHCPAACTCSN----NIVDCRGKGLTEIPTNLPET-ITEIRLEQNTIKVIPPGAFS--PYKKLRRIDLSNNQISELAPD 74 (220)
T ss_dssp CCCSCTTSEEET----TEEECTTSCCSSCCSSCCTT-CCEEECCSSCCCEECTTSST--TCTTCCEEECCSSCCCEECTT
T ss_pred CCCCCCCCEECC----CEEEcCCCCcCcCCCccCcC-CCEEECCCCcCCCcCHhHhh--CCCCCCEEECCCCcCCCcCHH
Confidence 468999999985 56999999999999887755 88888888888888777665 677777777777777777666
Q ss_pred ccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCC
Q psy1672 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173 (600)
Q Consensus 94 ~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 173 (600)
+|.++++|++|+|++|.|+.++...|..+++|++|+|++|.++.+.+ ..|..+++|
T Consensus 75 ~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~------------------------~~~~~l~~L 130 (220)
T 2v9t_B 75 AFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRV------------------------DAFQDLHNL 130 (220)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT------------------------TTTTTCTTC
T ss_pred HhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCH------------------------HHcCCCCCC
Confidence 67777777777777777776666556666666666666665555544 445555566
Q ss_pred CEEEcCCCcCCCCCcccccccccccEEEccCCcCccccccccchhhhcccCCCCCCCCCCCCccccccccccccccccCc
Q psy1672 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253 (600)
Q Consensus 174 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~~~~~C~~p~~l~g~~l~~l~~~~~~C 253 (600)
+.|+|++|.|+.++...|..+++|+.|++.+|+|.|+|.+.|+..|+...........|..|..++|+.+.++..++|.|
T Consensus 131 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l~~~l~~~~~~~~~~~C~~P~~l~g~~l~~l~~~~~~c 210 (220)
T 2v9t_B 131 NLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 210 (220)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCCBCSCCBEEESGGGTTCBGGGSCGGGCCC
T ss_pred CEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHHHHHHHHhCCCCccCCCcCCchHHcCCchhhCCHHHCcC
Confidence 66666666666666666777788899999999999999999999998854433356789999999999999999999988
Q ss_pred ccc
Q psy1672 254 KPE 256 (600)
Q Consensus 254 ~p~ 256 (600)
...
T Consensus 211 ~~~ 213 (220)
T 2v9t_B 211 SAA 213 (220)
T ss_dssp ---
T ss_pred ccc
Confidence 643
No 6
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.96 E-value=2.4e-28 Score=238.60 Aligned_cols=212 Identities=27% Similarity=0.512 Sum_probs=154.2
Q ss_pred CCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCC-hhhhcccCCCCccEEEeecccCcccCc
Q psy1672 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILP-KEAFRRAGLLNLQKLFLARCHIGQIDS 92 (600)
Q Consensus 14 ~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~-~~~f~~~~l~~L~~L~L~~n~l~~i~~ 92 (600)
..+||..|.|.| ..++|.++.++.+|..++.. +++|+|++|.|+.++ ...|. .+.+|+.|+|++|.|+.+.+
T Consensus 2 ~~~CP~~C~C~~----~~l~~s~n~l~~iP~~~~~~-~~~L~L~~N~l~~~~~~~~~~--~l~~L~~L~L~~N~i~~i~~ 74 (220)
T 2v70_A 2 SLACPEKCRCEG----TTVDCSNQKLNKIPEHIPQY-TAELRLNNNEFTVLEATGIFK--KLPQLRKINFSNNKITDIEE 74 (220)
T ss_dssp --CCCTTCEEET----TEEECCSSCCSSCCSCCCTT-CSEEECCSSCCCEECCCCCGG--GCTTCCEEECCSSCCCEECT
T ss_pred CCCCCCCCEECC----CEeEeCCCCcccCccCCCCC-CCEEEcCCCcCCccCchhhhc--cCCCCCEEECCCCcCCEECH
Confidence 458999999996 46999999999999877665 788888888888774 34454 56667777776666666666
Q ss_pred cccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCC
Q psy1672 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172 (600)
Q Consensus 93 ~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~ 172 (600)
.+|.++++|++|+|++|.|+.+++..|..+++|++|+|++|.++.+ .+..|..+++
T Consensus 75 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~------------------------~~~~~~~l~~ 130 (220)
T 2v70_A 75 GAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCV------------------------GNDSFIGLSS 130 (220)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCB------------------------CTTSSTTCTT
T ss_pred HHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeE------------------------CHhHcCCCcc
Confidence 6666666666666666666666555555555555555555555544 4445555566
Q ss_pred CCEEEcCCCcCCCCCcccccccccccEEEccCCcCccccccccchhhhcccCCCCCCCCCCCCccccccccccccccccC
Q psy1672 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFA 252 (600)
Q Consensus 173 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~~~~~C~~p~~l~g~~l~~l~~~~~~ 252 (600)
|+.|+|++|.|+.+.+..|..+++|+.|++.+|+|.|+|.+.|+..|+...........|..|..++|..+.+++...+.
T Consensus 131 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~~~~~~~~~~~~~C~~P~~l~g~~l~~l~~~~~~ 210 (220)
T 2v70_A 131 VRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFT 210 (220)
T ss_dssp CSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHHHHHHSCCBCCCCEEEESGGGTTEEGGGSCGGGCC
T ss_pred CCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHHHHHhcCccccCCccCCChHHCCCChhhCCHHHcc
Confidence 66666666666666666677778889999999999999999999999985443345678999999999999999988887
Q ss_pred cccc
Q psy1672 253 CKPE 256 (600)
Q Consensus 253 C~p~ 256 (600)
|...
T Consensus 211 ~~~~ 214 (220)
T 2v70_A 211 CDDA 214 (220)
T ss_dssp CCC-
T ss_pred cccc
Confidence 7643
No 7
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.6e-27 Score=241.78 Aligned_cols=234 Identities=32% Similarity=0.609 Sum_probs=164.0
Q ss_pred CCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcccc
Q psy1672 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGAL 95 (600)
Q Consensus 16 ~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f 95 (600)
+||..|.|.... +..++|.+.+++.+|..++.. +++|+|++|.++.++...|. .+.+|++|+|++|.++.+.+.+|
T Consensus 1 ~CP~~C~C~~~~-~~~~~c~~~~l~~ip~~~~~~-l~~L~l~~n~i~~~~~~~~~--~~~~L~~L~l~~n~l~~~~~~~~ 76 (285)
T 1ozn_A 1 PCPGACVCYNEP-KVTTSCPQQGLQAVPVGIPAA-SQRIFLHGNRISHVPAASFR--ACRNLTILWLHSNVLARIDAAAF 76 (285)
T ss_dssp CCCTTCEEECSS-SCEEECCSSCCSSCCTTCCTT-CSEEECTTSCCCEECTTTTT--TCTTCCEEECCSSCCCEECTTTT
T ss_pred CcCCCceECCCC-CeEEEcCcCCcccCCcCCCCC-ceEEEeeCCcCCccCHHHcc--cCCCCCEEECCCCccceeCHhhc
Confidence 599999997543 578999999999999877765 88888888888888776665 66777777777776666655556
Q ss_pred CCCCCccEEEccCCC-CCCCCccc------------------------cCCCCCCCEEEccCCCCCccCcccccCCCCcc
Q psy1672 96 DGLTNLIEIDLSDNL-LTSIPSLT------------------------FQSVRFLRDLNLARNPISKIEKGAFQFVPGLV 150 (600)
Q Consensus 96 ~~l~~L~~L~Ls~N~-l~~l~~~~------------------------f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~ 150 (600)
.++++|++|+|++|. ++.+++.. |..+++|++|+|++|.++.+.+..|..+++|+
T Consensus 77 ~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 156 (285)
T 1ozn_A 77 TGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 156 (285)
T ss_dssp TTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCcc
Confidence 666666666666664 55544434 44455555555555555555555556666666
Q ss_pred eeeCCCCcCcccChhhhcCCCCCCEEEcCC------------------------CcCCCCCcccccccccccEEEccCCc
Q psy1672 151 KLDMSESRLEHISPEAFTGAKSLESIKLNG------------------------NRLSHFPVRSVEPLLKLMMIELHDNP 206 (600)
Q Consensus 151 ~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~------------------------N~l~~l~~~~~~~l~~L~~L~l~~N~ 206 (600)
.|+|++|+++.+++..|..+++|+.|+|++ |.++.++...+..+++|+.|++.+|+
T Consensus 157 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 236 (285)
T 1ozn_A 157 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (285)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCC
Confidence 666666666666554444444444444444 44444444446667788899999999
Q ss_pred CccccccccchhhhcccCCCCCCCCCCCCccccccccccccccccC-c
Q psy1672 207 WVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFA-C 253 (600)
Q Consensus 207 ~~C~C~l~~l~~w~~~~~~~~~~~~C~~p~~l~g~~l~~l~~~~~~-C 253 (600)
|.|+|.+.|+..|+...........|..|..+.|..+.++...+|. |
T Consensus 237 ~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 237 WVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp EECSGGGHHHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred ccCCCCcHHHHHHHHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 9999999999999885443335678999999999999988888774 6
No 8
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.95 E-value=8.4e-28 Score=250.84 Aligned_cols=317 Identities=19% Similarity=0.221 Sum_probs=207.7
Q ss_pred CCCCC-eecccCCceEEEccCC-CCCccCCCCCC-CCceEEEeeC-CCCCCCChhhhcccCCCCccEEEeecccCcccCc
Q psy1672 17 CPSTC-ICKWKGGKQWMECRDK-FLITIPEAPES-ELTQVLDMSG-NNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS 92 (600)
Q Consensus 17 Cp~~C-~C~~~~~~~~v~C~~~-~L~~ip~~~~~-~~l~~L~Ls~-n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~ 92 (600)
||..| .|.+ ..++|.+. +|+.||. +.. ..|+.|+|++ |.|+.++...|. ++.+|+.|+|++|+|+.+++
T Consensus 1 cp~~c~~C~~----~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 1 CPDACCPHGS----SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLR--GLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp CCSSSCCSSS----SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSC--SCCCCSEEECCSSCCCEECT
T ss_pred CCCcCccccC----CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhc--cccCCCEEECCCCccceeCH
Confidence 99999 9985 35899998 9999999 543 4599999996 999999998887 89999999999999999999
Q ss_pred cccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCccc-ccCCCCcceeeCCCCcCcccChhhhcCCC
Q psy1672 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGA-FQFVPGLVKLDMSESRLEHISPEAFTGAK 171 (600)
Q Consensus 93 ~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~-~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~ 171 (600)
.+|.+|++|++|+|++|+|+.+++..|..+. |+.|+|.+|.+...+... |..+.......+..+.+.+..+.
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~------ 146 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG------ 146 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS------
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh------
Confidence 9999999999999999999999998888777 999999999998765421 22222222333444556665444
Q ss_pred CCCEEEcCCCcCCCCCcccccccccccEEEccCCcCccccccc--cchhhhcccCCCCC---CCCCCCCccccccccccc
Q psy1672 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMR--SIKMWLADKKNVPV---QPACTGPERLSGKVFSDL 246 (600)
Q Consensus 172 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~--~l~~w~~~~~~~~~---~~~C~~p~~l~g~~l~~l 246 (600)
.++.+.+..+....+. ...........+.-.+.|..... +...|+........ ...-.....+.-..+...
T Consensus 147 ~l~~l~~~~c~~P~i~----~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 222 (347)
T 2ifg_A 147 PLAHMPNASCGVPTLK----VQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSD 222 (347)
T ss_dssp CSSCCCCTTCCCCEEE----EECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCST
T ss_pred HHhcCCcccCCCCcee----ccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChH
Confidence 2233333222221111 11112222222222344543322 23567764433210 000001111222222333
Q ss_pred ccc-ccCccccc-------------ccccc--cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEe
Q psy1672 247 HAD-DFACKPEI-------------RMDSR--YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI 310 (600)
Q Consensus 247 ~~~-~~~C~p~i-------------~~~~~--~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~ 310 (600)
+.. .+.|...- ...+. ...+..|+.++|.|.+.|.|.|.|.|+++|+.+.... .....+.
T Consensus 223 D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~----~~~~~~~ 298 (347)
T 2ifg_A 223 LNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETS----FIFTEFL 298 (347)
T ss_dssp TTTCCEEECCEETTEECCEEECCCCBEEEEEEECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCS----SEEEEEC
T ss_pred HCCCeEEEEEEcCCCCEEEEEEEEEcCCCeeeeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCc----ceeeEEE
Confidence 334 45553211 11111 2345678999999999999999999999998877433 1122222
Q ss_pred e--CCceeeeeeEEEecCCCCCCeEEEEEEecCCCceeEEEEEEEEE
Q psy1672 311 E--QGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 311 ~--~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
. .+.....+.|.|.+++..|.|.|+|+|.|..|.+++.+.|.|..
T Consensus 299 ~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 299 EPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp CCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCC
T ss_pred eecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecC
Confidence 2 12233467899999999999999999999999999888887743
No 9
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.95 E-value=2.1e-27 Score=236.57 Aligned_cols=204 Identities=28% Similarity=0.530 Sum_probs=189.4
Q ss_pred CCCCCC--CeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCc
Q psy1672 15 SSCPST--CICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS 92 (600)
Q Consensus 15 ~~Cp~~--C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~ 92 (600)
.+||.. |.|... ...++|.+.+++.+|..++.. ++.|+|++|.+..++...|. ++.+|+.|+|++|.|+.+.+
T Consensus 2 ~~Cp~~~gC~C~~~--~~~l~~~~~~l~~~p~~~~~~-l~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 2 KTCETVTGCTCNEG--KKEVDCQGKSLDSVPSGIPAD-TEKLDLQSTGLATLSDATFR--GLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp --CHHHHSSEEEGG--GTEEECTTCCCSSCCSCCCTT-CCEEECTTSCCCCCCTTTTT--TCTTCCEEECTTSCCCCCCT
T ss_pred ccCCCCCceEcCCC--CeEEecCCCCccccCCCCCCC-CCEEEccCCCcCccCHhHhc--CcccCCEEECCCCcCCccCH
Confidence 469976 999532 467999999999999988876 99999999999999988887 89999999999999999999
Q ss_pred cccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCC
Q psy1672 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172 (600)
Q Consensus 93 ~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~ 172 (600)
..|..+++|++|+|++|.|+.++...|..+++|++|+|++|.++.+++..|..+++|+.|+|++|+|+.+++..|..+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 99999999999999999999999989999999999999999999998888999999999999999999999888999999
Q ss_pred CCEEEcCCCcCCCCCcccccccccccEEEccCCcCccc-cccccchhhhccc
Q psy1672 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCD-CNMRSIKMWLADK 223 (600)
Q Consensus 173 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~-C~l~~l~~w~~~~ 223 (600)
|+.|+|++|.+..++...|..+++|+.|++.+|+|.|+ |.+.++..|+...
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~~~ 208 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIREN 208 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHHHHHS
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccccHHHHHHHHhc
Confidence 99999999999999988899999999999999999999 9999999998743
No 10
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.94 E-value=1.2e-26 Score=241.98 Aligned_cols=232 Identities=19% Similarity=0.350 Sum_probs=181.1
Q ss_pred EEEccCC-CCCCCCccccCCCCCCCEEEccC-CCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCC
Q psy1672 103 EIDLSDN-LLTSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNG 180 (600)
Q Consensus 103 ~L~Ls~N-~l~~l~~~~f~~l~~L~~L~Ls~-N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 180 (600)
.++++++ .|+.+|. +..+.+|+.|+|++ |.|+.+.+..|..+++|+.|+|++|+|+.+.+..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTTTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4567776 7777776 67777788888875 888888777788888888888888888888888888888888888888
Q ss_pred CcCCCCCcccccccccccEEEccCCcCccccccccchhhhcccCCC-C-CCCCCCCCccccccccccccccccCc-cccc
Q psy1672 181 NRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV-P-VQPACTGPERLSGKVFSDLHADDFAC-KPEI 257 (600)
Q Consensus 181 N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~-~-~~~~C~~p~~l~g~~l~~l~~~~~~C-~p~i 257 (600)
|+|+.++...|..+. |+.|++.+|+|.|+|.+.|+..|+...... . ..+.|..+..+. .+. .+.| .|.+
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~~l~-----~l~--~~~c~~P~i 161 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLA-----HMP--NASCGVPTL 161 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCSS-----CCC--CTTCCCCEE
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCChHHh-----cCC--cccCCCCce
Confidence 888888877777665 999999999999999999999998744322 2 568999887332 222 2467 5666
Q ss_pred ccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe-EEEE
Q psy1672 258 RMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG-RFYC 336 (600)
Q Consensus 258 ~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G-~Y~C 336 (600)
...+....+.+|+.++|.|.+.|.|.+.+.|++++..+.... ........+.|.|.+++..|.| .|+|
T Consensus 162 ~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~-----------~~~~~~~~~~L~i~~v~~~D~G~~Y~C 230 (347)
T 2ifg_A 162 KVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATV-----------MKSGGLPSLGLTLANVTSDLNRKNVTC 230 (347)
T ss_dssp EEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEE-----------CCCCCSSEEEEEEESCCSTTTTCCEEE
T ss_pred eccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccc-----------ccceecccceEEEeeCChHHCCCeEEE
Confidence 666778889999999999999999999999999876433211 0011123468999999999999 9999
Q ss_pred EEecCCCceeEEEEEEEEE
Q psy1672 337 VAENRAGIADANFTLQVTY 355 (600)
Q Consensus 337 ~a~N~~G~~~~~v~L~V~~ 355 (600)
.|.|..|..+..+.+.|..
T Consensus 231 ~a~n~~g~~~~~~~l~V~~ 249 (347)
T 2ifg_A 231 WAENDVGRAEVSVQVNVSF 249 (347)
T ss_dssp CCEETTEECCEEECCCCBE
T ss_pred EEEcCCCCEEEEEEEEEcC
Confidence 9999999888877777644
No 11
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=6.9e-25 Score=220.74 Aligned_cols=200 Identities=32% Similarity=0.589 Sum_probs=147.0
Q ss_pred CCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCC
Q psy1672 19 STCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGL 98 (600)
Q Consensus 19 ~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l 98 (600)
..|.|.. ....++|.+.+++.+|..++.. ++.|+|++|.|+.++...|. ++.+|++|+|++|.++.+++..|.++
T Consensus 10 ~~C~c~~--~~~~l~~~~~~l~~ip~~~~~~-l~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~i~~~~~~~l 84 (270)
T 2o6q_A 10 GVCSCNN--NKNSVDCSSKKLTAIPSNIPAD-TKKLDLQSNKLSSLPSKAFH--RLTKLRLLYLNDNKLQTLPAGIFKEL 84 (270)
T ss_dssp CSBEEET--TTTEEECTTSCCSSCCSCCCTT-CSEEECCSSCCSCCCTTSSS--SCTTCCEEECCSSCCSCCCTTTTSSC
T ss_pred CCCEeCC--CCCEEEccCCCCCccCCCCCCC-CCEEECcCCCCCeeCHHHhc--CCCCCCEEECCCCccCeeChhhhcCC
Confidence 5688863 2468999999999999877765 88888888888887776665 66677777777776666666555556
Q ss_pred CCccEEEccCCCCCCCCccc------------------------cCCCCCCCEEEccCCCCCccCcccccCCCCcceeeC
Q psy1672 99 TNLIEIDLSDNLLTSIPSLT------------------------FQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154 (600)
Q Consensus 99 ~~L~~L~Ls~N~l~~l~~~~------------------------f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~L 154 (600)
++|++|+|++|.|+.++... |..+++|++|+|++|.++.++...|..+++|+.|+|
T Consensus 85 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 164 (270)
T 2o6q_A 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEe
Confidence 66666666665555555444 444555555555555555555555666677777777
Q ss_pred CCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCccccc-cccchhhhccc
Q psy1672 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLADK 223 (600)
Q Consensus 155 s~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~~~ 223 (600)
++|.+..+.+..|..+++|+.|+|++|.++.++...|..+++|+.|++.+|+|.|+|. +.++..|+...
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~~l~~~ 234 (270)
T 2o6q_A 165 YNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGIIYMAKWLKKK 234 (270)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSSSHHHHHHHHHH
T ss_pred cCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCccHHHHHHHHHhh
Confidence 7777777776677778888888888888888887778888999999999999999998 67888887743
No 12
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=2.3e-25 Score=228.04 Aligned_cols=223 Identities=24% Similarity=0.414 Sum_probs=159.2
Q ss_pred CCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCccc------
Q psy1672 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQI------ 90 (600)
Q Consensus 17 Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i------ 90 (600)
||..|.|.|. .++|.+.+++.+|..++.. +++|+|++|.++.++...|. .+++|+.|+|++|.++.+
T Consensus 1 CP~~C~C~~~----~l~c~~~~l~~ip~~~~~~-l~~L~L~~n~l~~i~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~ 73 (306)
T 2z66_A 1 CPSRCSCSGT----EIRCNSKGLTSVPTGIPSS-ATRLELESNKLQSLPHGVFD--KLTQLTKLSLSSNGLSFKGCCSQS 73 (306)
T ss_dssp CCTTCEEETT----EEECCSSCCSSCCSCCCTT-CCEEECCSSCCCCCCTTTTT--TCTTCSEEECCSSCCCEEEEEEHH
T ss_pred CcCCCeeCCC----EEEcCCCCcccCCCCCCCC-CCEEECCCCccCccCHhHhh--ccccCCEEECCCCccCcccCcccc
Confidence 9999999974 5999999999999988766 99999999999988887765 667777777766655422
Q ss_pred -------------------------------------------Cc-cccCCCCCccEEEccCCCCCCCCccccC------
Q psy1672 91 -------------------------------------------DS-GALDGLTNLIEIDLSDNLLTSIPSLTFQ------ 120 (600)
Q Consensus 91 -------------------------------------------~~-~~f~~l~~L~~L~Ls~N~l~~l~~~~f~------ 120 (600)
.. ..|..+++|++|+|++|.++.+.+..|.
T Consensus 74 ~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 153 (306)
T 2z66_A 74 DFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 153 (306)
T ss_dssp HHSCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCC
T ss_pred cccccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCC
Confidence 11 2344445555555555554433333333
Q ss_pred -------------------CCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCC
Q psy1672 121 -------------------SVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181 (600)
Q Consensus 121 -------------------~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N 181 (600)
.+++|++|+|++|.++.+.+..|..+++|+.|+|++|.+..+.+..+..+++|+.|+|++|
T Consensus 154 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 233 (306)
T 2z66_A 154 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 233 (306)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTS
T ss_pred EEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCC
Confidence 3445555555555555555555566666666666666666666666667777777777777
Q ss_pred cCCCCCcccccccc-cccEEEccCCcCccccccccchhhhcccCCCC---CCCCCCCCccccccccccc
Q psy1672 182 RLSHFPVRSVEPLL-KLMMIELHDNPWVCDCNMRSIKMWLADKKNVP---VQPACTGPERLSGKVFSDL 246 (600)
Q Consensus 182 ~l~~l~~~~~~~l~-~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~---~~~~C~~p~~l~g~~l~~l 246 (600)
.+....+..+..++ +|+.|++.+|+|.|+|.+.|+..|+....... ....|..|..+.|..+..+
T Consensus 234 ~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~~~~~ 302 (306)
T 2z66_A 234 HIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSL 302 (306)
T ss_dssp CCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTCBGGGC
T ss_pred CCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCceeeee
Confidence 77777666777774 89999999999999999999999988544332 4578999999999887765
No 13
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.3e-24 Score=221.22 Aligned_cols=200 Identities=25% Similarity=0.400 Sum_probs=157.6
Q ss_pred CCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCc-------
Q psy1672 20 TCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS------- 92 (600)
Q Consensus 20 ~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~------- 92 (600)
.|.|......+.++|.+++++.+|..++.. +++|+|++|.|+.++...|. .+.+|+.|+|++|.|+.++.
T Consensus 3 ~C~~~~l~~l~~l~~~~~~l~~ip~~~~~~-l~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~l~~L 79 (290)
T 1p9a_G 3 ICEVSKVASHLEVNCDKRNLTALPPDLPKD-TTILHLSENLLYTFSLATLM--PYTRLTQLNLDRAELTKLQVDGTLPVL 79 (290)
T ss_dssp SSEEECSTTCCEEECTTSCCSSCCSCCCTT-CCEEECTTSCCSEEEGGGGT--TCTTCCEEECTTSCCCEEECCSCCTTC
T ss_pred cccccccCCccEEECCCCCCCcCCCCCCCC-CCEEEcCCCcCCccCHHHhh--cCCCCCEEECCCCccCcccCCCCCCcC
Confidence 577765555688999999999999988765 99999999999988776665 56666666666555544322
Q ss_pred --------------cccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCc
Q psy1672 93 --------------GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESR 158 (600)
Q Consensus 93 --------------~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~ 158 (600)
..+..+++|++|+|++|+|+.+++..|..+++|++|+|++|.++.+++..|..+++|+.|+|++|+
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 235667777777777777777777777778888888888888888777777788888888888888
Q ss_pred CcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCccccccccchhhhccc
Q psy1672 159 LEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADK 223 (600)
Q Consensus 159 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~ 223 (600)
|+.+++..|..+++|+.|+|++|+|+.++... ..+..|+.+++.+|||.|+|.+.|+..|+.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~-~~~~~L~~l~L~~Np~~C~c~~~~l~~wl~~~ 223 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGF-FGSHLLPFAFLHGNPWLCNCEILYFRRWLQDN 223 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-TTTCCCSEEECCSCCBCCSGGGHHHHHHHHHT
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChhh-cccccCCeEEeCCCCccCcCccHHHHHHHHhC
Confidence 88887777778888888888888888887544 44568899999999999999999999998854
No 14
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.92 E-value=2e-24 Score=206.32 Aligned_cols=184 Identities=23% Similarity=0.477 Sum_probs=122.2
Q ss_pred CCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccc
Q psy1672 15 SSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGA 94 (600)
Q Consensus 15 ~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~ 94 (600)
..||..|.|.+ ..++|.+.+++.+|..++.. +++|+|++|.|+.++. .|. ++.+|+.|+|++|.|+.+.+.+
T Consensus 2 ~~CP~~C~C~~----~~l~~~~~~l~~ip~~~~~~-l~~L~L~~n~i~~ip~-~~~--~l~~L~~L~Ls~N~i~~i~~~~ 73 (193)
T 2wfh_A 2 SRCPTECTCLD----TVVRCSNKGLKVLPKGIPRD-VTELYLDGNQFTLVPK-ELS--NYKHLTLIDLSNNRISTLSNQS 73 (193)
T ss_dssp --CCTTCEEET----TEEECTTSCCSSCCSCCCTT-CCEEECCSSCCCSCCG-GGG--GCTTCCEEECCSSCCCCCCTTT
T ss_pred CCCCCCCEeCC----CEEEcCCCCCCcCCCCCCCC-CCEEECCCCcCchhHH-Hhh--cccCCCEEECCCCcCCEeCHhH
Confidence 37999999984 57999999999999877655 7888888887777763 333 4555555555555555554444
Q ss_pred cCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCC
Q psy1672 95 LDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174 (600)
Q Consensus 95 f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 174 (600)
|.++ ++|++|+|++|.|+.+.+..|..+++|+.|+|++|.|+.+
T Consensus 74 f~~l------------------------~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~------------ 117 (193)
T 2wfh_A 74 FSNM------------------------TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVV------------ 117 (193)
T ss_dssp TTTC------------------------TTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBC------------
T ss_pred ccCC------------------------CCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCee------------
Confidence 4444 4455555555555444433344334444444333333333
Q ss_pred EEEcCCCcCCCCCcccccccccccEEEccCCcCccccccccchhhhcccCCCCCCCCCCCCccccccccccccccccCcc
Q psy1672 175 SIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254 (600)
Q Consensus 175 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~~~~~C~~p~~l~g~~l~~l~~~~~~C~ 254 (600)
+...|..+++|+.|++.+|+|.|+|.+.|+..|+...........|..|..+.|+.+.++..+.+.|.
T Consensus 118 ------------~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~~~~~~~~~~C~~P~~l~g~~l~~~~~~~~~~~ 185 (193)
T 2wfh_A 118 ------------PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCA 185 (193)
T ss_dssp ------------CTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHSSCCCSCCBEEESGGGTTCBTTTSCGGGCCC-
T ss_pred ------------ChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHhccCCCCCcCcCCchHHCCCCcccCChHHeeeh
Confidence 22334445677788899999999999999999998554434567899999999999999888877664
No 15
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.90 E-value=1.3e-23 Score=200.44 Aligned_cols=186 Identities=27% Similarity=0.490 Sum_probs=125.0
Q ss_pred CCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChh-hhcccCCCCccEEEeecccCcccCccc
Q psy1672 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE-AFRRAGLLNLQKLFLARCHIGQIDSGA 94 (600)
Q Consensus 16 ~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~-~f~~~~l~~L~~L~L~~n~l~~i~~~~ 94 (600)
+||..|.|.| +.++|.+++++.+|..++.. +++|+|++|.|+.++.. .|. .+.+|+.|
T Consensus 1 ~CP~~C~C~~----~~l~~s~~~l~~ip~~~~~~-l~~L~l~~n~i~~~~~~~~~~--~l~~L~~L-------------- 59 (192)
T 1w8a_A 1 DCPAMCHCEG----TTVDCTGRGLKEIPRDIPLH-TTELLLNDNELGRISSDGLFG--RLPHLVKL-------------- 59 (192)
T ss_dssp CCCTTSEEET----TEEECTTSCCSSCCSCCCTT-CSEEECCSCCCCSBCCSCSGG--GCTTCCEE--------------
T ss_pred CcCCCCEECC----CEEEcCCCCcCcCccCCCCC-CCEEECCCCcCCccCCccccc--cCCCCCEE--------------
Confidence 5999999996 56999999999999877664 77777777777766643 233 44445444
Q ss_pred cCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCC
Q psy1672 95 LDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174 (600)
Q Consensus 95 f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 174 (600)
+|++|.|+.+.+..|..+++|++|+|++|.|+.+.+..|..+++|+.|+|++|+|+.+
T Consensus 60 ----------~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------------ 117 (192)
T 1w8a_A 60 ----------ELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCV------------ 117 (192)
T ss_dssp ----------ECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEE------------
T ss_pred ----------ECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCee------------
Confidence 5555544444444444444555555555544444443344444444444444444333
Q ss_pred EEEcCCCcCCCCCcccccccccccEEEccCCcCccccccccchhhhcccCCCCCCCCCCCCccccccccccccccccCcc
Q psy1672 175 SIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254 (600)
Q Consensus 175 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~~~~~C~~p~~l~g~~l~~l~~~~~~C~ 254 (600)
.+..|..+++|+.|++.+|+|.|+|.+.|+..|+...........|..|..++|+.+.++...+|.|.
T Consensus 118 ------------~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l~~~~l~~l~~~~~~C~ 185 (192)
T 1w8a_A 118 ------------MPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp ------------CTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTTTTSBGGGSCTTTCCCC
T ss_pred ------------CHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHHcCCChhhCcHhhcCcC
Confidence 23334455677788889999999999999999988553333567899999999999999999999997
Q ss_pred cc
Q psy1672 255 PE 256 (600)
Q Consensus 255 p~ 256 (600)
..
T Consensus 186 ~~ 187 (192)
T 1w8a_A 186 SE 187 (192)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 16
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.90 E-value=1.6e-23 Score=218.94 Aligned_cols=219 Identities=26% Similarity=0.431 Sum_probs=155.4
Q ss_pred hcCCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccC
Q psy1672 12 VSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQID 91 (600)
Q Consensus 12 ~~~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~ 91 (600)
.....|+..|.|.|.+ ..+|.+.+++.+|..++.. +++|++++|.++.++...|. ++++|+.|+|++|.++.+.
T Consensus 19 ~~~~~~~~~~~C~~~~---~c~~~~~~l~~iP~~~~~~-L~~L~l~~n~i~~~~~~~~~--~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 19 KEESSNQASLSCDRNG---ICKGSSGSLNSIPSGLTEA-VKSLDLSNNRITYISNSDLQ--RCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp --------CCEECTTS---EEECCSTTCSSCCTTCCTT-CCEEECTTSCCCEECTTTTT--TCTTCCEEECTTSCCCEEC
T ss_pred CccCCCccCCCCCCCe---EeeCCCCCccccccccccc-CcEEECCCCcCcccCHHHhc--cCCCCCEEECCCCccCccC
Confidence 3455799999999864 4889999999999987765 99999999999888877665 7888888888888888777
Q ss_pred ccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCc-ccccCCCCcceeeCCC--------------
Q psy1672 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEK-GAFQFVPGLVKLDMSE-------------- 156 (600)
Q Consensus 92 ~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~-~~~~~l~~L~~L~Ls~-------------- 156 (600)
+.+|.++++|++|+|++|.|+.++...|..+++|++|+|++|.++.++. ..|..+++|+.|++++
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 172 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccC
Confidence 7777777777777777777777776666667777777777776665544 3344444444444433
Q ss_pred -----------CcCcccChh------------------------------------------------------------
Q psy1672 157 -----------SRLEHISPE------------------------------------------------------------ 165 (600)
Q Consensus 157 -----------n~l~~i~~~------------------------------------------------------------ 165 (600)
|.+..+.+.
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~ 252 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCC
T ss_pred CCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhh
Confidence 333322111
Q ss_pred -------------------hhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCccccc-cccchhhhcccCC
Q psy1672 166 -------------------AFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLADKKN 225 (600)
Q Consensus 166 -------------------~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~~~~~ 225 (600)
.+..+++|+.|+|++|+++.++...|..+++|+.|++.+|+|.|+|. +.++..|+.....
T Consensus 253 ~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~l~~l~~~~~~~~~ 332 (353)
T 2z80_A 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQ 332 (353)
T ss_dssp EEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHHHHHTTT
T ss_pred ccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCCcHHHHHHHHhccc
Confidence 12345678888888888888887777889999999999999999996 8899999885433
Q ss_pred C-CCCCCCCCCc
Q psy1672 226 V-PVQPACTGPE 236 (600)
Q Consensus 226 ~-~~~~~C~~p~ 236 (600)
. .....|..|.
T Consensus 333 ~~~~~~~C~~p~ 344 (353)
T 2z80_A 333 KEQGSAKCSGSG 344 (353)
T ss_dssp TEESCCBBTTTC
T ss_pred cCCCCcccCCCC
Confidence 2 2456788763
No 17
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=6e-23 Score=206.99 Aligned_cols=213 Identities=26% Similarity=0.440 Sum_probs=148.6
Q ss_pred CCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCC
Q psy1672 19 STCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGL 98 (600)
Q Consensus 19 ~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l 98 (600)
.+|.|... ...++|.+.++..+|..++.. +++|+|++|.++.++...|. .+++|+.|+|++|.++.+.+.+|.++
T Consensus 1 ~~C~~~~~--~~~~~c~~~~l~~ip~~l~~~-l~~L~ls~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l 75 (276)
T 2z62_A 1 EPCVEVVP--NITYQCMELNFYKIPDNLPFS-TKNLDLSFNPLRHLGSYSFF--SFPELQVLDLSRCEIQTIEDGAYQSL 75 (276)
T ss_dssp CCSEEEET--TTEEECTTSCCSSCCSSSCTT-CCEEECTTCCCCEECTTTTT--TCTTCSEEECTTCCCCEECTTTTTTC
T ss_pred CCceeccC--CceEEecCCCccccCCCCCCC-ccEEECCCCcccccCHhHhc--cccCCcEEECCCCcCCccCHHHccCC
Confidence 36888754 357999999999999988766 99999999999988877665 78888888888888888877778888
Q ss_pred CCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccC-hhhhcCCC------
Q psy1672 99 TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS-PEAFTGAK------ 171 (600)
Q Consensus 99 ~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~-~~~~~~l~------ 171 (600)
++|++|+|++|.++.++...|..+++|++|++++|.+..+....|..+++|+.|++++|.+..+. +..+..++
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 88888888888877776655666666666666555555544434444444444444444444322 22333333
Q ss_pred ---------------------------------------------CCCEEEcCCCcCCCCCcccccccccccEEEccCCc
Q psy1672 172 ---------------------------------------------SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206 (600)
Q Consensus 172 ---------------------------------------------~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~ 206 (600)
+|+.|+|++|.++.++...|..+++|+.|++.+|+
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 45555666666666666667778899999999999
Q ss_pred Cccccc-cccchhhhcccCCCC-CCCCCCCCc
Q psy1672 207 WVCDCN-MRSIKMWLADKKNVP-VQPACTGPE 236 (600)
Q Consensus 207 ~~C~C~-l~~l~~w~~~~~~~~-~~~~C~~p~ 236 (600)
|.|+|. +.|+..|+....... ....|..+.
T Consensus 236 ~~c~c~~l~~l~~~~~~~~~~~~~~~~C~~~~ 267 (276)
T 2z62_A 236 WDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSG 267 (276)
T ss_dssp BCCCTTTTHHHHHHHHHTGGGBCSCCBBTTTC
T ss_pred ccccCCchHHHHHHHHhcccccCCCceeeCCC
Confidence 999995 788889987432221 345676553
No 18
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.90 E-value=1.1e-22 Score=199.59 Aligned_cols=177 Identities=30% Similarity=0.624 Sum_probs=126.5
Q ss_pred CCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccc
Q psy1672 15 SSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGA 94 (600)
Q Consensus 15 ~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~ 94 (600)
...-..|.|.|. .++|.+.+++.+|..++.. +++|+|++|.|+.++...|. .+.+|+.|+|++|+|+.+++..
T Consensus 11 ~~~~~~~~Cs~~----~v~c~~~~l~~ip~~~~~~-L~~L~Ls~n~i~~~~~~~~~--~l~~L~~L~L~~N~l~~i~~~~ 83 (229)
T 3e6j_A 11 AACPSQCSCSGT----TVDCRSKRHASVPAGIPTN-AQILYLHDNQITKLEPGVFD--SLINLKELYLGSNQLGALPVGV 83 (229)
T ss_dssp CCCCTTCEEETT----EEECTTSCCSSCCSCCCTT-CSEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTT
T ss_pred ccCCCCCEEeCC----EeEccCCCcCccCCCCCCC-CCEEEcCCCccCccCHHHhh--CccCCcEEECCCCCCCCcChhh
Confidence 345678999974 4999999999999877755 78888888887777666654 5666666666666666666555
Q ss_pred cCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCC
Q psy1672 95 LDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174 (600)
Q Consensus 95 f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 174 (600)
|.++++|++|+|++|.|+.+++..|..+++|++|+|++|.|+ .+ +..+..+++|+
T Consensus 84 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~------------------------~l-p~~~~~l~~L~ 138 (229)
T 3e6j_A 84 FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT------------------------EL-PRGIERLTHLT 138 (229)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC------------------------SC-CTTGGGCTTCS
T ss_pred cccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc------------------------cc-CcccccCCCCC
Confidence 666666666666666666555555555555555555555544 44 23345667777
Q ss_pred EEEcCCCcCCCCCcccccccccccEEEccCCcCccccc-cccchhhhccc
Q psy1672 175 SIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLADK 223 (600)
Q Consensus 175 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~~~ 223 (600)
.|+|++|+|..++...|..+++|+.|++.+|+|.|+|. +.++..|+...
T Consensus 139 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~l~~~~~~~ 188 (229)
T 3e6j_A 139 HLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRDIMYLRNWVADH 188 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGGGHHHHHHHHHC
T ss_pred EEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcchhHHHHHHHHhC
Confidence 77777777777777777888899999999999999996 88889998743
No 19
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.8e-22 Score=194.69 Aligned_cols=174 Identities=32% Similarity=0.620 Sum_probs=121.8
Q ss_pred CCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccC
Q psy1672 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96 (600)
Q Consensus 17 Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~ 96 (600)
||..|.|.|. .++|.+.+++.+|..++.. +++|+|++|.++.++...|. .+.+|+.|+|++|+++.+++..|.
T Consensus 1 Cp~~C~C~~~----~v~c~~~~l~~~p~~~~~~-l~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~ 73 (208)
T 2o6s_A 1 CPSRCSCSGT----TVECYSQGRTSVPTGIPAQ-TTYLDLETNSLKSLPNGVFD--ELTSLTQLYLGGNKLQSLPNGVFN 73 (208)
T ss_dssp CCTTCEEETT----EEECCSSCCSSCCSCCCTT-CSEEECCSSCCCCCCTTTTT--TCTTCSEEECCSSCCCCCCTTTTT
T ss_pred CcCCCEECCC----EEEecCCCccCCCCCCCCC-CcEEEcCCCccCcCChhhhc--ccccCcEEECCCCccCccChhhcC
Confidence 9999999974 5999999999999877665 88888888888887777665 677777777777777776666666
Q ss_pred CCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEE
Q psy1672 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESI 176 (600)
Q Consensus 97 ~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L 176 (600)
.+++|++|+|++|.|+.++...|..+++|++|+|++|.++.+.+. .|..+++|+.|
T Consensus 74 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------------------------~~~~l~~L~~L 129 (208)
T 2o6s_A 74 KLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDG------------------------VFDKLTQLKDL 129 (208)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT------------------------TTTTCTTCCEE
T ss_pred CCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHh------------------------HhccCCcCCEE
Confidence 666777777766666666655555566666666666655555444 44445555555
Q ss_pred EcCCCcCCCCCcccccccccccEEEccCCcCccccc-cccchhhhc
Q psy1672 177 KLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLA 221 (600)
Q Consensus 177 ~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~ 221 (600)
+|++|.++.++...+..+++|+.|++.+|+|.|+|. ++++..|..
T Consensus 130 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~L~~~~n 175 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWIN 175 (208)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTTHHHHHHHH
T ss_pred ECCCCccceeCHHHhccCCCccEEEecCCCeecCCCCHHHHHHHHH
Confidence 555555555555555666677777777778888875 566666655
No 20
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=3e-22 Score=197.51 Aligned_cols=184 Identities=20% Similarity=0.348 Sum_probs=165.4
Q ss_pred CCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeeccc-CcccCcc
Q psy1672 15 SSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCH-IGQIDSG 93 (600)
Q Consensus 15 ~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~-l~~i~~~ 93 (600)
+.||..|.|... ....|+|.+ ++.+|. ++.. +++|+|++|+|+.++...|. ++++|+.|+|++|. ++.+++.
T Consensus 2 ~~cp~~C~C~~~-~~~~v~c~~--l~~ip~-~~~~-l~~L~l~~n~l~~i~~~~~~--~l~~L~~L~l~~n~~l~~i~~~ 74 (239)
T 2xwt_C 2 GCSSPPCECHQE-EDFRVTCKD--IQRIPS-LPPS-TQTLKLIETHLRTIPSHAFS--NLPNISRIYVSIDVTLQQLESH 74 (239)
T ss_dssp -CCSSSCSEEEC-STTEEEECS--CSSCCC-CCTT-CCEEEEESCCCSEECTTTTT--TCTTCCEEEEECCSSCCEECTT
T ss_pred CCCCCCCeeCCC-CcceeEccC--ccccCC-CCCc-ccEEEEeCCcceEECHHHcc--CCCCCcEEeCCCCCCcceeCHh
Confidence 579999999851 246788976 999999 6665 99999999999999998887 89999999999997 9999998
Q ss_pred ccCCCCCccEEEccC-CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcc---eeeCCCC-cCcccChhhhc
Q psy1672 94 ALDGLTNLIEIDLSD-NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLV---KLDMSES-RLEHISPEAFT 168 (600)
Q Consensus 94 ~f~~l~~L~~L~Ls~-N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~---~L~Ls~n-~l~~i~~~~~~ 168 (600)
+|.++++|++|+|++ |.|+.+++..|..+++|++|+|++|.++.++. |..+++|+ .|++++| .+..+++..|.
T Consensus 75 ~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp~--~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~ 152 (239)
T 2xwt_C 75 SFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPD--LTKVYSTDIFFILEITDNPYMTSIPVNAFQ 152 (239)
T ss_dssp TEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCCC--CTTCCBCCSEEEEEEESCTTCCEECTTTTT
T ss_pred HcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCccccc--cccccccccccEEECCCCcchhhcCccccc
Confidence 999999999999998 99999998899999999999999999999764 78888888 9999999 99999988999
Q ss_pred CCCCCC-EEEcCCCcCCCCCcccccccccccEEEccCCc-Cc
Q psy1672 169 GAKSLE-SIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP-WV 208 (600)
Q Consensus 169 ~l~~L~-~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~-~~ 208 (600)
++++|+ .|++++|.++.++...|.. .+|+.|++.+|+ +.
T Consensus 153 ~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~ 193 (239)
T 2xwt_C 153 GLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLT 193 (239)
T ss_dssp TTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCC
T ss_pred chhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcc
Confidence 999999 9999999999998877776 799999999995 43
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.87 E-value=9.5e-22 Score=220.53 Aligned_cols=188 Identities=23% Similarity=0.350 Sum_probs=166.9
Q ss_pred CCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcccc
Q psy1672 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGAL 95 (600)
Q Consensus 16 ~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f 95 (600)
.|..+|.|... ..+++|.+++|++||..++.. +++|+|++|+|+.|++..|. ++++|++|+|++|+|+.|++++|
T Consensus 22 ~~~~~c~~~~~--~~~~~c~~~~l~~vP~~lp~~-~~~LdLs~N~i~~l~~~~f~--~l~~L~~L~Ls~N~i~~i~~~~f 96 (635)
T 4g8a_A 22 ESWEPCVEVVP--NITYQCMELNFYKIPDNLPFS-TKNLDLSFNPLRHLGSYSFF--SFPELQVLDLSRCEIQTIEDGAY 96 (635)
T ss_dssp ---CCSEEEET--TTEEECTTSCCSSCCSSSCTT-CCEEECTTSCCCEECTTTTT--TCTTCCEEECTTCCCCEECTTTT
T ss_pred CCCCCccccCC--CCEEECCCCCcCccCCCCCcC-CCEEEeeCCCCCCCCHHHHh--CCCCCCEEECCCCcCCCcChhHh
Confidence 34456777643 468999999999999999877 99999999999999999997 89999999999999999999999
Q ss_pred CCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccC-hhhhcCCCCCC
Q psy1672 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS-PEAFTGAKSLE 174 (600)
Q Consensus 96 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~-~~~~~~l~~L~ 174 (600)
.++++|++|+|++|+|+.+++..|.++++|++|+|++|.++.+++..|.++++|+.|+|++|.++.+. +..+..+++|+
T Consensus 97 ~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 176 (635)
T 4g8a_A 97 QSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 176 (635)
T ss_dssp TTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCC
T ss_pred cCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhh
Confidence 99999999999999999999999999999999999999999999889999999999999999998764 56788899999
Q ss_pred EEEcCCCcCCCCCccccccccccc----EEEccCCcCc
Q psy1672 175 SIKLNGNRLSHFPVRSVEPLLKLM----MIELHDNPWV 208 (600)
Q Consensus 175 ~L~Ls~N~l~~l~~~~~~~l~~L~----~L~l~~N~~~ 208 (600)
.|+|++|+++.+....+..+.++. .+++..|++.
T Consensus 177 ~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~ 214 (635)
T 4g8a_A 177 HLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 214 (635)
T ss_dssp EEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred hhcccCccccccccccccchhhhhhhhhhhhcccCccc
Confidence 999999999999887777665443 5677777654
No 22
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.86 E-value=1e-21 Score=220.22 Aligned_cols=201 Identities=21% Similarity=0.360 Sum_probs=174.9
Q ss_pred CceEEEeeCCCCCC-CChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCC-CCCCccccCCCCCCCE
Q psy1672 50 LTQVLDMSGNNLQI-LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL-TSIPSLTFQSVRFLRD 127 (600)
Q Consensus 50 ~l~~L~Ls~n~L~~-l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l-~~l~~~~f~~l~~L~~ 127 (600)
.++.+++..+.+.. .+...|. .+.+|+.++++.|.+..+.+..+..++.|++|+|++|.+ ..+.+..|..+++|++
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~--~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFL--SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTT--TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cccchhhhhccccccccccccc--cccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 37788887777654 3445565 799999999999999999999999999999999999974 4556668999999999
Q ss_pred EEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCccccccc-ccccEEEccCCc
Q psy1672 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL-LKLMMIELHDNP 206 (600)
Q Consensus 128 L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l-~~L~~L~l~~N~ 206 (600)
|+|++|+++.+.+..|.++++|+.|+|++|+|+.+.+..|.++++|+.|+|++|+|+.+++..+..+ .+|+.|++++||
T Consensus 499 L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np 578 (635)
T 4g8a_A 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 578 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCC
T ss_pred EECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999888887 689999999999
Q ss_pred CccccccccchhhhcccCCCC---CCCCCCCCccccccccccccccccCccc
Q psy1672 207 WVCDCNMRSIKMWLADKKNVP---VQPACTGPERLSGKVFSDLHADDFACKP 255 (600)
Q Consensus 207 ~~C~C~l~~l~~w~~~~~~~~---~~~~C~~p~~l~g~~l~~l~~~~~~C~p 255 (600)
|.|||++.||..|+.+..... ..+.|+.|..++|+.+.+++ ++|+.
T Consensus 579 ~~C~C~~~~~~~wl~~~~~~~~~~~~~~C~~P~~~~g~~l~~~~---~~C~~ 627 (635)
T 4g8a_A 579 FACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSLN---ITCQM 627 (635)
T ss_dssp BCCSGGGHHHHHHHHHTTTTBSCGGGCBBCSSTTTTTCBGGGCC---CCC--
T ss_pred CcccCCcHHHHHHHHhCCCccCCCCCceeCCchHHCCCEeeeec---cCCCC
Confidence 999999999999998544322 46789999999999988773 46754
No 23
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.86 E-value=2.2e-21 Score=220.33 Aligned_cols=184 Identities=22% Similarity=0.359 Sum_probs=135.5
Q ss_pred CCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCcc--------ccCCCCCCCEEEccCCCCCccCccccc
Q psy1672 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSL--------TFQSVRFLRDLNLARNPISKIEKGAFQ 144 (600)
Q Consensus 73 ~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~--------~f~~l~~L~~L~Ls~N~i~~l~~~~~~ 144 (600)
.+.+|+.|+|++|+++.+++.+|.++++|++|+|++|.++.++.. .|..+++|+.|+|++|.++.++...|.
T Consensus 478 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 688899999999999999888899999999999999998876332 377889999999999999999888899
Q ss_pred CCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCccccc-ccccccEEEccCCcCcccccc-ccchhhhcc
Q psy1672 145 FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE-PLLKLMMIELHDNPWVCDCNM-RSIKMWLAD 222 (600)
Q Consensus 145 ~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~l~~L~~L~l~~N~~~C~C~l-~~l~~w~~~ 222 (600)
++++|+.|+|++|+|+.+++..|..+++|+.|+|++|+|+.++...+. .+++|+.+++.+|||.|+|.. .||..|+..
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~~ 637 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE 637 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCSSC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHHHHh
Confidence 999999999999999999998899999999999999999999988777 788999999999999999996 999999874
Q ss_pred cCC-CC---CCCCCCCCccccccccccccccccCcccc
Q psy1672 223 KKN-VP---VQPACTGPERLSGKVFSDLHADDFACKPE 256 (600)
Q Consensus 223 ~~~-~~---~~~~C~~p~~l~g~~l~~l~~~~~~C~p~ 256 (600)
... ++ ..+.|..|..++|+.+.+++...+.|.+.
T Consensus 638 ~~~~~~~~~~~~~C~~p~~~~g~~l~~~~~~~~~~~~~ 675 (680)
T 1ziw_A 638 THTNIPELSSHYLCNTPPHYHGFPVRLFDTSSCKDSAH 675 (680)
T ss_dssp C-------------------------------------
T ss_pred cCcccccccCCcEECCchHHCCCcccccChhhcCCCcc
Confidence 322 21 35799999999999999998887666543
No 24
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.86 E-value=8.2e-21 Score=191.14 Aligned_cols=189 Identities=30% Similarity=0.499 Sum_probs=170.8
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.+.+.+..+..++.......+++|+|++|.++.++ .+. .+++|++|+|++|.++.+.+..|..+++|++|+|++
T Consensus 43 L~~L~l~~~~i~~~~~l~~l~~L~~L~l~~n~l~~~~--~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 43 IDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDIS--ALK--ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp CCEEECTTSCCCCCTTGGGCTTCCEEECTTSCCCCCG--GGT--TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred eeeeeeCCCCcccccccccCCCCcEEECCCCCCCCch--hhc--CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 3567888888888876544455999999999999875 343 799999999999999999998899999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.++.+++..|..+++|++|+|++|.++.+.+..|..+++|+.|++++|+++.+.+..|..+++|+.|+|++|.+..++.
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 99999999889999999999999999999988889999999999999999999988889999999999999999999998
Q ss_pred ccccccccccEEEccCCcCccccc-cccchhhhc
Q psy1672 189 RSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLA 221 (600)
Q Consensus 189 ~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~ 221 (600)
..+..+++|+.|++.+|+|.|+|. ++++..|..
T Consensus 199 ~~~~~l~~L~~L~l~~N~~~~~~~~l~~l~~~~n 232 (272)
T 3rfs_A 199 GVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWIN 232 (272)
T ss_dssp TTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHH
T ss_pred HHHhCCcCCCEEEccCCCccccCcHHHHHHHHHH
Confidence 888999999999999999999996 666766755
No 25
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.85 E-value=2.7e-21 Score=216.54 Aligned_cols=217 Identities=21% Similarity=0.280 Sum_probs=170.0
Q ss_pred eEEEccCCCCCccCCCCC-CCCceEEEeeCCCCCCCCh-hhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEcc
Q psy1672 30 QWMECRDKFLITIPEAPE-SELTQVLDMSGNNLQILPK-EAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~-~~~l~~L~Ls~n~L~~l~~-~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls 107 (600)
+.++..+..+..+|..+. ...++.|++++|.+..++. ..|. .+++|+.|++++|.+..+.+..|.++++|++|+|+
T Consensus 379 ~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 456 (606)
T 3vq2_A 379 RHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFL--SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMA 456 (606)
T ss_dssp CEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTT--TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred cEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhh--ccccCCEEECcCCCCCccchhhhcCCCCCCEEECC
Confidence 345555666666664332 2348889999998887665 5565 78999999999999998888889999999999999
Q ss_pred CCCCCC-CCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCC
Q psy1672 108 DNLLTS-IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186 (600)
Q Consensus 108 ~N~l~~-l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l 186 (600)
+|.++. +.+..|..+++|+.|+|++|.++.+.+..|..+++|+.|+|++|++..+.+..|..+++|+.|+|++|+++.+
T Consensus 457 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 536 (606)
T 3vq2_A 457 GNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS 536 (606)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCE
T ss_pred CCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCccc
Confidence 999986 3455788999999999999999999888899999999999999999999899999999999999999999998
Q ss_pred Ccccccccc-cccEEEccCCcCccccccccchhhhcccCCCC---CCCCCCCCcccccccccccccc
Q psy1672 187 PVRSVEPLL-KLMMIELHDNPWVCDCNMRSIKMWLADKKNVP---VQPACTGPERLSGKVFSDLHAD 249 (600)
Q Consensus 187 ~~~~~~~l~-~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~~~---~~~~C~~p~~l~g~~l~~l~~~ 249 (600)
+.. +..++ .|+.+++.+|+|.|+|.+.|+..|+....... ..+.|..|..+.|+.+.+++..
T Consensus 537 p~~-~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~~~~l~~~~~~ 602 (606)
T 3vq2_A 537 KGI-LQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLVNVEQMTCATPVEMNTSLVLDFNNS 602 (606)
T ss_dssp ESC-GGGSCTTCCEEECCSCCCCCSSTTHHHHTTTTTSSSSBSSGGGCCCC----------------
T ss_pred CHh-HhhhcccCcEEEccCCCcccCCccHHHHHHHHcCcccccCCccceeCCChHhCCCEeeecccc
Confidence 865 77776 59999999999999999999999998543322 4678999999999998877655
No 26
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.82 E-value=3.2e-20 Score=207.78 Aligned_cols=195 Identities=24% Similarity=0.342 Sum_probs=153.3
Q ss_pred ceEEEeeCCCCCCCC-hhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCC---CccccCCCCCCC
Q psy1672 51 TQVLDMSGNNLQILP-KEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI---PSLTFQSVRFLR 126 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~-~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l---~~~~f~~l~~L~ 126 (600)
++.|++++|.+..+. ...|. .+++|+.|++++|.+..+.+..|..+++|++|+|++|.++.. ....|..+++|+
T Consensus 402 L~~L~l~~n~l~~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 402 LELLDLAFTRLKVKDAQSPFQ--NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp CSEEECTTCCEECCTTCCTTT--TCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred CCeEECCCCcCCCcccchhhh--CcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 666666666665432 23343 567777777777777777666777777788888887777652 223567778888
Q ss_pred EEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCc
Q psy1672 127 DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206 (600)
Q Consensus 127 ~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~ 206 (600)
+|+|++|.++.+.+..|..+++|+.|+|++|++..+.+..+..++.| .|+|++|.++.+++..+..+++|+.+++.+|+
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCC
Confidence 88888888888877888888899999999999988888888889999 99999999999888888889999999999999
Q ss_pred CccccccccchhhhcccCCC---CCCCCCCCCccccccccccccc
Q psy1672 207 WVCDCNMRSIKMWLADKKNV---PVQPACTGPERLSGKVFSDLHA 248 (600)
Q Consensus 207 ~~C~C~l~~l~~w~~~~~~~---~~~~~C~~p~~l~g~~l~~l~~ 248 (600)
|.|+|...|+..|+...... ...+.|..|..++|+.+.+++.
T Consensus 559 ~~c~c~~~~~~~w~~~~~~~~~~~~~~~C~~p~~~~g~~l~~~~~ 603 (606)
T 3t6q_A 559 LDCTCSNIYFLEWYKENMQKLEDTEDTLCENPPLLRGVRLSDVTL 603 (606)
T ss_dssp EECSGGGHHHHHHHHHCGGGEECGGGCBEEESGGGTTCBGGGCCC
T ss_pred ccccCCcHHHHHHHHhCcccccCCCCCeeCCchHhCCCeeeeeec
Confidence 99999999999999853221 1467899999999999887744
No 27
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.82 E-value=8.6e-20 Score=196.93 Aligned_cols=184 Identities=20% Similarity=0.296 Sum_probs=154.7
Q ss_pred CCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCc-ccCcc
Q psy1672 15 SSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIG-QIDSG 93 (600)
Q Consensus 15 ~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~-~i~~~ 93 (600)
.+||..|.|.. ..++|.+.+++.+|. ++.. +++|+|++|.|+.+++..|. ++.+|++|+|++|.+. .+++.
T Consensus 2 ~p~~~~c~~~~----~~~~c~~~~l~~lp~-l~~~-l~~L~Ls~n~i~~~~~~~~~--~l~~L~~L~L~~n~~~~~i~~~ 73 (455)
T 3v47_A 2 DPGTSECSVIG----YNAICINRGLHQVPE-LPAH-VNYVDLSLNSIAELNETSFS--RLQDLQFLKVEQQTPGLVIRNN 73 (455)
T ss_dssp -----CCEEET----TEEECCSSCCSSCCC-CCTT-CCEEECCSSCCCEECTTTTS--SCTTCCEEECCCCSTTCEECTT
T ss_pred CCccceeEEEc----cccCcCCCCcccCCC-CCCc-cCEEEecCCccCcCChhHhc--cCccccEEECcCCcccceECcc
Confidence 57899999973 569999999999999 5555 99999999999999877776 8999999999999886 77788
Q ss_pred ccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCc--cCcccccCCCCcceeeCCCCcCcccChhh-hcCC
Q psy1672 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK--IEKGAFQFVPGLVKLDMSESRLEHISPEA-FTGA 170 (600)
Q Consensus 94 ~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~--l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~-~~~l 170 (600)
+|.++++|++|+|++|.++.+.+..|..+++|++|+|++|.++. .....|..+++|+.|+|++|.+..+.+.. +.++
T Consensus 74 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l 153 (455)
T 3v47_A 74 TFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNM 153 (455)
T ss_dssp TTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGC
T ss_pred cccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCC
Confidence 89999999999999999999988889999999999999999987 33345889999999999999999987665 8899
Q ss_pred CCCCEEEcCCCcCCCCCccccccc--ccccEEEccCCc
Q psy1672 171 KSLESIKLNGNRLSHFPVRSVEPL--LKLMMIELHDNP 206 (600)
Q Consensus 171 ~~L~~L~Ls~N~l~~l~~~~~~~l--~~L~~L~l~~N~ 206 (600)
++|+.|+|++|.+..+....+..+ .+|+.+++.+|.
T Consensus 154 ~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~ 191 (455)
T 3v47_A 154 RRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSIT 191 (455)
T ss_dssp TTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCB
T ss_pred CcccEEeCCCCcccccChhhhhccccccccccccccCc
Confidence 999999999999998877666655 345555555554
No 28
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.82 E-value=6e-20 Score=205.62 Aligned_cols=189 Identities=21% Similarity=0.263 Sum_probs=170.4
Q ss_pred CCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccc
Q psy1672 15 SSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGA 94 (600)
Q Consensus 15 ~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~ 94 (600)
..|+..|.|... ..+++|.+.+++.+|..++.. +++|+|++|.|+.+++..|. ++.+|++|+|++|.+..+.+.+
T Consensus 2 ~~~~~~C~~~~~--~~~~~c~~~~l~~iP~~l~~~-l~~L~Ls~n~i~~~~~~~~~--~l~~L~~L~Ls~n~i~~~~~~~ 76 (606)
T 3t6q_A 2 TSSDQKCIEKEV--NKTYNCENLGLNEIPGTLPNS-TECLEFSFNVLPTIQNTTFS--RLINLTFLDLTRCQIYWIHEDT 76 (606)
T ss_dssp ----CCCEEEET--TTEEECTTSCCSSCCTTSCTT-CCEEECTTCCCSEECTTTST--TCTTCSEEECTTCCCCEECTTT
T ss_pred ccccCceecccC--CceEECCCCCcccCcCCCCCc-CcEEEccCCccCcCChhHhc--cCccceEEECCCCccceeChhh
Confidence 368999999754 358999999999999988887 99999999999999888887 8999999999999999999999
Q ss_pred cCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCC
Q psy1672 95 LDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174 (600)
Q Consensus 95 f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 174 (600)
|.++++|++|+|++|.++.+.+..|..+++|++|+|++|.++.+.+..|..+++|++|++++|.+..+....+..+++|+
T Consensus 77 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 156 (606)
T 3t6q_A 77 FQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLK 156 (606)
T ss_dssp TTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCC
T ss_pred ccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccC
Confidence 99999999999999999999888999999999999999999999888899999999999999999998655666799999
Q ss_pred EEEcCCCcCCCCCccccccccccc--EEEccCCcCc
Q psy1672 175 SIKLNGNRLSHFPVRSVEPLLKLM--MIELHDNPWV 208 (600)
Q Consensus 175 ~L~Ls~N~l~~l~~~~~~~l~~L~--~L~l~~N~~~ 208 (600)
.|++++|.+..+....+..+.+|+ .+++.+|.+.
T Consensus 157 ~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 157 VLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp EEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred EEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 999999999999888888889888 8899998765
No 29
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.82 E-value=2.4e-19 Score=185.29 Aligned_cols=182 Identities=26% Similarity=0.464 Sum_probs=158.7
Q ss_pred CCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcc
Q psy1672 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93 (600)
Q Consensus 14 ~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~ 93 (600)
...||..|.|.+ +.++|.+..+..+|..++.. +++|+|++|.|+.++...|. .+.+|++|+|++|.++.+.+.
T Consensus 22 ~~~cp~~c~c~l----~~l~~~~~~l~~lp~~~~~~-l~~L~L~~n~i~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~ 94 (330)
T 1xku_A 22 GPVCPFRCQCHL----RVVQCSDLGLEKVPKDLPPD-TALLDLQNNKITEIKDGDFK--NLKNLHTLILINNKISKISPG 94 (330)
T ss_dssp CCCCCTTCEEET----TEEECTTSCCCSCCCSCCTT-CCEEECCSSCCCCBCTTTTT--TCTTCCEEECCSSCCCCBCTT
T ss_pred cCCCCCCCcCCC----eEEEecCCCccccCccCCCC-CeEEECCCCcCCEeChhhhc--cCCCCCEEECCCCcCCeeCHH
Confidence 357999999986 46999999999999988766 99999999999999988776 899999999999999999888
Q ss_pred ccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcc--cChhhhcCCC
Q psy1672 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH--ISPEAFTGAK 171 (600)
Q Consensus 94 ~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~--i~~~~~~~l~ 171 (600)
+|..+++|++|+|++|.|+.++...+ ++|++|++++|.++.+.+..|..+++|+.|++++|.+.. +.+..+..++
T Consensus 95 ~~~~l~~L~~L~Ls~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~ 171 (330)
T 1xku_A 95 AFAPLVKLERLYLSKNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 171 (330)
T ss_dssp TTTTCTTCCEEECCSSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCT
T ss_pred HhcCCCCCCEEECCCCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCC
Confidence 99999999999999999999987554 679999999999999888888999999999999999865 6667788888
Q ss_pred CCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 172 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|+.|++++|.+..++...+ ++|+.|++.+|.+.
T Consensus 172 ~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 172 KLSYIRIADTNITTIPQGLP---PSLTELHLDGNKIT 205 (330)
T ss_dssp TCCEEECCSSCCCSCCSSCC---TTCSEEECTTSCCC
T ss_pred CcCEEECCCCccccCCcccc---ccCCEEECCCCcCC
Confidence 99999999988888775433 67788888887654
No 30
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.82 E-value=1.3e-19 Score=187.58 Aligned_cols=181 Identities=28% Similarity=0.471 Sum_probs=152.8
Q ss_pred CCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcc
Q psy1672 14 VSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93 (600)
Q Consensus 14 ~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~ 93 (600)
...||..|.|.+ ..++|.+.+++.+|..+... ++.|+|++|.+..++...|. ++.+|+.|+|++|.++.+.+.
T Consensus 24 ~~~cp~~c~c~l----~~l~~~~~~l~~ip~~~~~~-l~~L~l~~n~i~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~ 96 (332)
T 2ft3_A 24 SAMCPFGCHCHL----RVVQCSDLGLKAVPKEISPD-TTLLDLQNNDISELRKDDFK--GLQHLYALVLVNNKISKIHEK 96 (332)
T ss_dssp -CCCCSSCEEET----TEEECCSSCCSSCCSCCCTT-CCEEECCSSCCCEECTTTTT--TCTTCCEEECCSSCCCEECGG
T ss_pred cCCCCCCCcccC----CEEECCCCCccccCCCCCCC-CeEEECCCCcCCccCHhHhh--CCCCCcEEECCCCccCccCHh
Confidence 457999999986 46999999999999988765 99999999999999887776 899999999999999999999
Q ss_pred ccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcc--cChhhhcCCC
Q psy1672 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH--ISPEAFTGAK 171 (600)
Q Consensus 94 ~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~--i~~~~~~~l~ 171 (600)
+|.++++|++|+|++|.++.++...+ ++|++|++++|.++.+.+..|..+++|+.|++++|.+.. +.+..+..+
T Consensus 97 ~~~~l~~L~~L~L~~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l- 172 (332)
T 2ft3_A 97 AFSPLRKLQKLYISKNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL- 172 (332)
T ss_dssp GSTTCTTCCEEECCSSCCCSCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-
T ss_pred HhhCcCCCCEEECCCCcCCccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-
Confidence 99999999999999999999988654 689999999999999988889999999999999999864 556667666
Q ss_pred CCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 172 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|+.|++++|.++.++...+ ++|+.|++.+|.+.
T Consensus 173 ~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 173 KLNYLRISEAKLTGIPKDLP---ETLNELHLDHNKIQ 206 (332)
T ss_dssp CCSCCBCCSSBCSSCCSSSC---SSCSCCBCCSSCCC
T ss_pred ccCEEECcCCCCCccCcccc---CCCCEEECCCCcCC
Confidence 77777777777777664332 45666667666543
No 31
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.81 E-value=1.4e-19 Score=189.04 Aligned_cols=185 Identities=19% Similarity=0.297 Sum_probs=142.3
Q ss_pred CCCCC-CeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccC-cccCcc
Q psy1672 16 SCPST-CICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHI-GQIDSG 93 (600)
Q Consensus 16 ~Cp~~-C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l-~~i~~~ 93 (600)
+||.. |.|.+ .+|+|.+++|++||..++.. +++|+|++|+|+.|+..+|. ++++|++|+|++|.+ +.++..
T Consensus 1 gCp~~~C~C~~----~~v~C~~~~Lt~iP~~l~~~-l~~L~Ls~N~i~~i~~~~f~--~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 1 GCHHRICHCSN----RVFLCQESKVTEIPSDLPRN-AIELRFVLTKLRVIQKGAFS--GFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp -CCCSSSEEET----TEEEEESTTCCSCCTTCCTT-CSEEEEESCCCSEECTTSST--TCTTCCEEEEECCTTCCEECTT
T ss_pred CCCCCccEeeC----CEEEecCCCCCccCcCcCCC-CCEEEccCCcCCCcCHHHHc--CCCCCCEEECcCCCCCCccChh
Confidence 59965 99984 57999999999999988765 99999999999999999997 899999999999997 557888
Q ss_pred ccCCCCCccE-EEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCC------------------------
Q psy1672 94 ALDGLTNLIE-IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG------------------------ 148 (600)
Q Consensus 94 ~f~~l~~L~~-L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~------------------------ 148 (600)
+|.++++|++ +.+..|+|+.+++..|..+++|++|++++|.++.+.+..+....+
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 8999998875 566779999999889999999999999999888766544433333
Q ss_pred --cceeeCCCCcCcccChhhhcCCCCCCEEEcC-CCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 149 --LVKLDMSESRLEHISPEAFTGAKSLESIKLN-GNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 149 --L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls-~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
|+.|+|++|+|+.+++..|. ..+|+.|++. +|.++.++.+.|..+++|+.|++++|.+.
T Consensus 154 ~~l~~L~L~~N~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 154 FESVILWLNKNGIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp SSCEEEECCSSCCCEECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred hhhhhhccccccccCCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 44555666666666554443 3456666664 35666666666666667777777776643
No 32
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.81 E-value=1.7e-19 Score=201.97 Aligned_cols=185 Identities=25% Similarity=0.346 Sum_probs=165.8
Q ss_pred CCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCC
Q psy1672 19 STCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGL 98 (600)
Q Consensus 19 ~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l 98 (600)
.+|.|... ..+++|.+.+++.+|..++.. +++|+|++|.++.++...|. ++.+|++|+|++|.++.+.+.+|.++
T Consensus 5 ~~c~~~~~--~~~~~c~~~~l~~ip~~~~~~-l~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~Ls~n~l~~i~~~~~~~l 79 (606)
T 3vq2_A 5 NPCIEVVP--NITYQCMDQKLSKVPDDIPSS-TKNIDLSFNPLKILKSYSFS--NFSELQWLDLSRCEIETIEDKAWHGL 79 (606)
T ss_dssp -CCEEEET--TTEEECTTSCCSSCCTTSCTT-CCEEECTTSCCCEECTTTTT--TCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred CCceecCC--CCceEccCCCcccCCCCCCCC-cCEEECCCCCcCEeChhhcc--CCccCcEEeCCCCcccccCHHHhhch
Confidence 34777533 468999999999999988866 99999999999999988887 89999999999999999999999999
Q ss_pred CCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccC-hhhhcCCCCCCEEE
Q psy1672 99 TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS-PEAFTGAKSLESIK 177 (600)
Q Consensus 99 ~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~-~~~~~~l~~L~~L~ 177 (600)
++|++|+|++|.++.+.+..|..+++|++|+|++|.++.+.+..|..+++|+.|++++|.+..+. +..|.++++|++|+
T Consensus 80 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~ 159 (606)
T 3vq2_A 80 HHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVD 159 (606)
T ss_dssp TTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEE
T ss_pred hhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEE
Confidence 99999999999999998889999999999999999999998888999999999999999999754 77899999999999
Q ss_pred cCCCcCCCCCccccccccccc----EEEccCCcCc
Q psy1672 178 LNGNRLSHFPVRSVEPLLKLM----MIELHDNPWV 208 (600)
Q Consensus 178 Ls~N~l~~l~~~~~~~l~~L~----~L~l~~N~~~ 208 (600)
|++|.+..++...+..+.+|+ .+++.+|.+.
T Consensus 160 Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~ 194 (606)
T 3vq2_A 160 LSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID 194 (606)
T ss_dssp CCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCC
T ss_pred ccCCcceecChhhhhhhhccccccceeeccCCCcc
Confidence 999999998877777766554 7888888754
No 33
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.81 E-value=1.5e-19 Score=194.94 Aligned_cols=162 Identities=25% Similarity=0.448 Sum_probs=146.9
Q ss_pred CCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeC
Q psy1672 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154 (600)
Q Consensus 75 ~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~L 154 (600)
.+|+.|+|++|.+..+.+..|..+++|++|+|++|.++.+++..|..+++|++|+|++|.++.+.+..|..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 68999999999999998888999999999999999999998888999999999999999999998889999999999999
Q ss_pred CCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCccccc-cccchhhhcccCCCC-CCCCC
Q psy1672 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLADKKNVP-VQPAC 232 (600)
Q Consensus 155 s~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~~~~~~~-~~~~C 232 (600)
++|++..+.+..|..+++|+.|+|++|+++.++...+..+++|+.|++.+|+|.|+|. +.|+..|+....... ....|
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~~~~~~c 434 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKC 434 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTTTTEESCCBB
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHHHHHHHhCccceeeeeee
Confidence 9999999999999999999999999999999998888999999999999999999997 778889987443322 34567
Q ss_pred CCCc
Q psy1672 233 TGPE 236 (600)
Q Consensus 233 ~~p~ 236 (600)
..+.
T Consensus 435 ~~~~ 438 (455)
T 3v47_A 435 SGSG 438 (455)
T ss_dssp TTTC
T ss_pred cCCC
Confidence 6543
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.81 E-value=2.7e-19 Score=196.60 Aligned_cols=201 Identities=20% Similarity=0.309 Sum_probs=162.4
Q ss_pred EEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCc--cccCCCCCccEEEccC
Q psy1672 31 WMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS--GALDGLTNLIEIDLSD 108 (600)
Q Consensus 31 ~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~--~~f~~l~~L~~L~Ls~ 108 (600)
.++..+..+..++.......+++|++++|.++......+. .+++|+.|+|++|.++.++. ..|..+++|++|+|++
T Consensus 306 ~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~ 383 (520)
T 2z7x_B 306 NFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCG--HLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQ 383 (520)
T ss_dssp EEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCC--CCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCS
T ss_pred EEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhc--cCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCC
Confidence 3444455555444212223499999999999975445554 79999999999999987543 5689999999999999
Q ss_pred CCCCC-CCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCC
Q psy1672 109 NLLTS-IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187 (600)
Q Consensus 109 N~l~~-l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~ 187 (600)
|.++. ++...|..+++|++|+|++|.++...+..+. ++|+.|+|++|+|+.++...+ .+++|+.|+|++|+++.++
T Consensus 384 N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~-~l~~L~~L~L~~N~l~~l~ 460 (520)
T 2z7x_B 384 NSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVV-KLEALQELNVASNQLKSVP 460 (520)
T ss_dssp SCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGG-GCTTCCEEECCSSCCCCCC
T ss_pred CcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhh-cCCCCCEEECCCCcCCccC
Confidence 99998 8877788899999999999999765443332 689999999999998865544 8999999999999999999
Q ss_pred cccccccccccEEEccCCcCccccccccc-hhhhcccCCCC-CCCCCCCCc
Q psy1672 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSI-KMWLADKKNVP-VQPACTGPE 236 (600)
Q Consensus 188 ~~~~~~l~~L~~L~l~~N~~~C~C~l~~l-~~w~~~~~~~~-~~~~C~~p~ 236 (600)
...+..+++|+.|++.+|+|.|+|.+.|+ ..|+.+..... ....|..|.
T Consensus 461 ~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~~~~~~~~~~~~~~~C~~p~ 511 (520)
T 2z7x_B 461 DGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSG 511 (520)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHHHHHTTTTEESCCBBTTTC
T ss_pred HHHhccCCcccEEECcCCCCcccCCchHHHHHHHHhccccCCCCCCcCCcc
Confidence 87788999999999999999999999999 89987543322 567888874
No 35
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.80 E-value=5.4e-19 Score=196.09 Aligned_cols=184 Identities=24% Similarity=0.375 Sum_probs=168.5
Q ss_pred CCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCC
Q psy1672 20 TCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99 (600)
Q Consensus 20 ~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~ 99 (600)
.|.|... ...++|.+.+++++|..++.. +++|+|++|.++.++...|. ++++|++|+|++|.++.+.+.+|.+++
T Consensus 2 ~c~~~~~--~~~~~c~~~~l~~ip~~l~~~-l~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~Ls~n~i~~i~~~~~~~l~ 76 (570)
T 2z63_A 2 PCVEVVP--NITYQCMELNFYKIPDNLPFS-TKNLDLSFNPLRHLGSYSFF--SFPELQVLDLSRCEIQTIEDGAYQSLS 76 (570)
T ss_dssp CSEEEET--TTEEECCSSCCSSCCSSSCSS-CCEEECCSCCCCEECTTTTT--TCSSCCEEECTTCCCCEECTTTTTTCT
T ss_pred CccccCC--CcEEEeCCCCccccCCCcccc-ccEEEccCCccCccChhHhh--CCCCceEEECCCCcCCccCcccccCch
Confidence 5777643 467999999999999988776 99999999999999988887 899999999999999999999999999
Q ss_pred CccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccC-hhhhcCCCCCCEEEc
Q psy1672 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS-PEAFTGAKSLESIKL 178 (600)
Q Consensus 100 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~-~~~~~~l~~L~~L~L 178 (600)
+|++|+|++|.++.+++..|..+++|++|++++|.++.+....|..+++|++|++++|.+..+. +..|.++++|+.|++
T Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l 156 (570)
T 2z63_A 77 HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDL 156 (570)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEEC
T ss_pred hCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeC
Confidence 9999999999999999889999999999999999999998878999999999999999999864 788999999999999
Q ss_pred CCCcCCCCCcccccccccc----cEEEccCCcCc
Q psy1672 179 NGNRLSHFPVRSVEPLLKL----MMIELHDNPWV 208 (600)
Q Consensus 179 s~N~l~~l~~~~~~~l~~L----~~L~l~~N~~~ 208 (600)
++|.+..++...+..+.+| ..+++.+|.+.
T Consensus 157 ~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~ 190 (570)
T 2z63_A 157 SSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (570)
T ss_dssp TTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred cCCccceecHHHccchhccchhhhhcccCCCCce
Confidence 9999999988888888888 78999998764
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.79 E-value=1.3e-18 Score=193.21 Aligned_cols=186 Identities=23% Similarity=0.308 Sum_probs=154.5
Q ss_pred EEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCc--cccCCCCCccEEEccC
Q psy1672 31 WMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS--GALDGLTNLIEIDLSD 108 (600)
Q Consensus 31 ~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~--~~f~~l~~L~~L~Ls~ 108 (600)
.++..+..+..++.......+++|++++|.++......|. .+++|+.|+|++|.++.++. ..|..+++|++|+|++
T Consensus 335 ~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~ 412 (562)
T 3a79_B 335 MLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCS--TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412 (562)
T ss_dssp EEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCC--SCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTT
T ss_pred EEEccCCCcccccCccCCCCceEEECCCCccccchhhhhc--ccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCC
Confidence 3444455554444212223499999999999985555555 79999999999999998764 5689999999999999
Q ss_pred CCCCC-CCccccCCCCCCCEEEccCCCCCccCcccccCC-CCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCC
Q psy1672 109 NLLTS-IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV-PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186 (600)
Q Consensus 109 N~l~~-l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l-~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l 186 (600)
|.++. ++...|..+++|++|+|++|.++...+ ..+ ++|+.|+|++|+|+.++...+ .+++|+.|+|++|+|+.+
T Consensus 413 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~---~~l~~~L~~L~L~~N~l~~ip~~~~-~l~~L~~L~L~~N~l~~l 488 (562)
T 3a79_B 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF---RCLPPKVKVLDLHNNRIMSIPKDVT-HLQALQELNVASNQLKSV 488 (562)
T ss_dssp SCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG---SSCCTTCSEEECCSSCCCCCCTTTT-SSCCCSEEECCSSCCCCC
T ss_pred CcCCCccChhhhcCcccCCEEECCCCCCCcchh---hhhcCcCCEEECCCCcCcccChhhc-CCCCCCEEECCCCCCCCC
Confidence 99998 888889999999999999999875433 334 699999999999999976665 899999999999999999
Q ss_pred CcccccccccccEEEccCCcCccccccccchh-hhcc
Q psy1672 187 PVRSVEPLLKLMMIELHDNPWVCDCNMRSIKM-WLAD 222 (600)
Q Consensus 187 ~~~~~~~l~~L~~L~l~~N~~~C~C~l~~l~~-w~~~ 222 (600)
+...+..+++|+.+++++|+|.|+|.+.|+.. |...
T Consensus 489 ~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~~~~~ 525 (562)
T 3a79_B 489 PDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINK 525 (562)
T ss_dssp CTTSTTTCTTCCCEECCSCCBCCCHHHHHHHHHHHHH
T ss_pred CHHHHhcCCCCCEEEecCCCcCCCcchHHHHHHHHHh
Confidence 98778899999999999999999999999955 8763
No 37
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.79 E-value=1e-18 Score=163.93 Aligned_cols=138 Identities=30% Similarity=0.522 Sum_probs=102.2
Q ss_pred CCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccC
Q psy1672 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96 (600)
Q Consensus 17 Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~ 96 (600)
||..|.|.| ..++|.+.+++.+|..++.. ++.|+|++|.++.++...|. .+.+|+.|+|++|.++.+++..|.
T Consensus 1 Cp~~C~C~~----~~l~~~~~~l~~~p~~~~~~-l~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~ 73 (177)
T 2o6r_A 1 CPSRCSCSG----TEIRCNSKGLTSVPTGIPSS-ATRLELESNKLQSLPHGVFD--KLTQLTKLSLSQNQIQSLPDGVFD 73 (177)
T ss_dssp CCTTCEEET----TEEECCSSCCSSCCTTCCTT-CSEEECCSSCCCCCCTTTTT--TCTTCSEEECCSSCCCCCCTTTTT
T ss_pred CcCCCEeCC----CEEEecCCCCccCCCCCCCC-CcEEEeCCCcccEeCHHHhc--CcccccEEECCCCcceEeChhHcc
Confidence 999999987 45999999999999877655 88888888888888777665 677777777777777777776677
Q ss_pred CCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcc
Q psy1672 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161 (600)
Q Consensus 97 ~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~ 161 (600)
.+++|++|+|++|.|+.+++..|..+++|++|+|++|.++.+++..|..+++|+.|+|++|.+.+
T Consensus 74 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 77777777777777777776666666677777777776666655555555555555555555543
No 38
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.79 E-value=9.1e-19 Score=198.78 Aligned_cols=182 Identities=23% Similarity=0.343 Sum_probs=164.8
Q ss_pred CCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCC
Q psy1672 20 TCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99 (600)
Q Consensus 20 ~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~ 99 (600)
.|.|.+ ..++|.+.+++++|..++.. +++|+|++|.++.++...|. ++.+|++|+|++|.++.+.+.+|.+++
T Consensus 1 ~C~~~~----~~~~cs~~~L~~ip~~~~~~-l~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 73 (680)
T 1ziw_A 1 KCTVSH----EVADCSHLKLTQVPDDLPTN-ITVLNLTHNQLRRLPAANFT--RYSQLTSLDVGFNTISKLEPELCQKLP 73 (680)
T ss_dssp ---CBS----SEEECCSSCCSSCCSCSCTT-CSEEECCSSCCCCCCGGGGG--GGTTCSEEECCSSCCCCCCTTHHHHCT
T ss_pred CceeEC----CeeECCCCCccccccccCCC-CcEEECCCCCCCCcCHHHHh--CCCcCcEEECCCCccCccCHHHHhccc
Confidence 477873 57999999999999988765 99999999999999998887 899999999999999999999999999
Q ss_pred CccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcC
Q psy1672 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLN 179 (600)
Q Consensus 100 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls 179 (600)
+|++|+|++|.|+.++...|..+++|++|+|++|.++.+.+..|..+++|+.|+|++|.+..+.+..+.++++|+.|+++
T Consensus 74 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 153 (680)
T 1ziw_A 74 MLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLS 153 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECC
T ss_pred CcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEcc
Confidence 99999999999999999889999999999999999999988889999999999999999999988889999999999999
Q ss_pred CCcCCCCCccccc--ccccccEEEccCCcCc
Q psy1672 180 GNRLSHFPVRSVE--PLLKLMMIELHDNPWV 208 (600)
Q Consensus 180 ~N~l~~l~~~~~~--~l~~L~~L~l~~N~~~ 208 (600)
+|.++.++...+. .+.+|+.|++.+|.+.
T Consensus 154 ~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 154 NNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp SSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCcccccCHHHhhccccccccEEECCCCccc
Confidence 9999998876554 3478999999999764
No 39
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.77 E-value=2.7e-18 Score=199.80 Aligned_cols=217 Identities=25% Similarity=0.450 Sum_probs=139.7
Q ss_pred eEEEccCCCCCccCCCC--CCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEcc
Q psy1672 30 QWMECRDKFLITIPEAP--ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~--~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls 107 (600)
..++..+..+..++... ....++.|+|++|.+..++...|. ++.+|+.|+|++|.++.+.+..|.++++|++|+|+
T Consensus 269 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 346 (844)
T 3j0a_A 269 RHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFY--GLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQ 346 (844)
T ss_dssp CEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTT--TCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECC
T ss_pred cEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhc--CCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECC
Confidence 34555555555443221 112366666666666666555554 56666666666666666655556666666666666
Q ss_pred CCCCCCCCccccCCCCCCCEEEccCCCCCccC------------------------------------------------
Q psy1672 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIE------------------------------------------------ 139 (600)
Q Consensus 108 ~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~------------------------------------------------ 139 (600)
+|.|+.+++..|..+++|++|+|++|.++.+.
T Consensus 347 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~ 426 (844)
T 3j0a_A 347 KNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVP 426 (844)
T ss_dssp SCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCT
T ss_pred CCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCC
Confidence 66655555555555555555555544433211
Q ss_pred ----------------------------------------------cccccCCCCcceeeCCCCcCcccChhhhcCCCCC
Q psy1672 140 ----------------------------------------------KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173 (600)
Q Consensus 140 ----------------------------------------------~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 173 (600)
+..|..+++|+.|+|++|.|+.+.+..|.++++|
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 506 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL 506 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSC
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhh
Confidence 1224456677777777777777777788889999
Q ss_pred CEEEcCCCcCCCCCccccc-------------------ccccccEEEccCCcCccccccccchhhhcccCC----CCCCC
Q psy1672 174 ESIKLNGNRLSHFPVRSVE-------------------PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN----VPVQP 230 (600)
Q Consensus 174 ~~L~Ls~N~l~~l~~~~~~-------------------~l~~L~~L~l~~N~~~C~C~l~~l~~w~~~~~~----~~~~~ 230 (600)
+.|+|++|+|+.++...+. .+.+|+.+++.+|+|.|+|.+.|+..|+..... .+..+
T Consensus 507 ~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~~~f~~~~~~~~~~~~~~~~~~ 586 (844)
T 3j0a_A 507 RGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPPADI 586 (844)
T ss_dssp SEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSCCSHHHHHHHTTTTTCCCGGGC
T ss_pred heeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccccHHHHHHHHhcCcccccccccC
Confidence 9999999999887754432 134677889999999999999999999874322 12457
Q ss_pred CCCCCccccccccccccc
Q psy1672 231 ACTGPERLSGKVFSDLHA 248 (600)
Q Consensus 231 ~C~~p~~l~g~~l~~l~~ 248 (600)
.|..|..+.|..+.+++.
T Consensus 587 ~C~~p~~~~g~~l~~~~~ 604 (844)
T 3j0a_A 587 YCVYPDSFSGVSLFSLST 604 (844)
T ss_dssp CCSSCSSSCSCCTTTCCC
T ss_pred ccCCchhhCCCccccCcc
Confidence 899999888887766544
No 40
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.76 E-value=4.3e-18 Score=167.58 Aligned_cols=175 Identities=20% Similarity=0.234 Sum_probs=158.8
Q ss_pred ceEEEccCCCCCccCCCC--CCCCceEEEeeCCC-CCCCChhhhcccCCCCccEEEeec-ccCcccCccccCCCCCccEE
Q psy1672 29 KQWMECRDKFLITIPEAP--ESELTQVLDMSGNN-LQILPKEAFRRAGLLNLQKLFLAR-CHIGQIDSGALDGLTNLIEI 104 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~--~~~~l~~L~Ls~n~-L~~l~~~~f~~~~l~~L~~L~L~~-n~l~~i~~~~f~~l~~L~~L 104 (600)
-+.++..+.+++.+|... ....+++|++++|. ++.++...|. ++++|++|+|++ |.++.+++.+|.++++|++|
T Consensus 33 l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~--~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFY--NLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp CCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEE--SCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred ccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcC--CCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 467888899999998732 23459999999997 9999998887 899999999998 99999999999999999999
Q ss_pred EccCCCCCCCCccccCCCCCCC---EEEccCC-CCCccCcccccCCCCcc-eeeCCCCcCcccChhhhcCCCCCCEEEcC
Q psy1672 105 DLSDNLLTSIPSLTFQSVRFLR---DLNLARN-PISKIEKGAFQFVPGLV-KLDMSESRLEHISPEAFTGAKSLESIKLN 179 (600)
Q Consensus 105 ~Ls~N~l~~l~~~~f~~l~~L~---~L~Ls~N-~i~~l~~~~~~~l~~L~-~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls 179 (600)
+|++|.++.++. |..+.+|+ +|++++| .++.+++..|..+++|+ .|++++|+++.++...|.. .+|+.|+|+
T Consensus 111 ~l~~n~l~~lp~--~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKMFPD--LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCSCCC--CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCccccc--cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 999999999886 88899998 9999999 99999988899999999 9999999999998888876 899999999
Q ss_pred CCc-CCCCCccccccc-ccccEEEccCCcCc
Q psy1672 180 GNR-LSHFPVRSVEPL-LKLMMIELHDNPWV 208 (600)
Q Consensus 180 ~N~-l~~l~~~~~~~l-~~L~~L~l~~N~~~ 208 (600)
+|+ ++.++...|..+ ++|+.|++.+|.+.
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 995 999998889999 99999999999865
No 41
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.76 E-value=1.6e-18 Score=191.50 Aligned_cols=173 Identities=26% Similarity=0.390 Sum_probs=157.3
Q ss_pred EEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCC
Q psy1672 32 MECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111 (600)
Q Consensus 32 v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l 111 (600)
.+|.+++++++|..++.. +++|+|++|.++.+++..|. ++++|++|+|++|+++.+.+.+|.++++|++|+|++|.+
T Consensus 10 c~~~~~~l~~ip~~~~~~-L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFTSIPSGLTAA-MKSLDLSFNKITYIGHGDLR--ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCSSCCSCCCTT-CCEEECCSSCCCEECSSTTS--SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccccccccCCCC-ccEEECcCCccCccChhhhh--cCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 457889999999988765 99999999999999877776 899999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCEEEccCCCCCccC-cccccCCCCcceeeCCCCc-CcccChhhhcCCCCCCEEEcCCCcCCCCCcc
Q psy1672 112 TSIPSLTFQSVRFLRDLNLARNPISKIE-KGAFQFVPGLVKLDMSESR-LEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189 (600)
Q Consensus 112 ~~l~~~~f~~l~~L~~L~Ls~N~i~~l~-~~~~~~l~~L~~L~Ls~n~-l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 189 (600)
+.+++..|..+++|++|+|++|.++.+. +..|..+++|+.|++++|. +..+++..|.++++|+.|++++|.+....+.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 9999988999999999999999998753 4578999999999999998 7788778899999999999999999987777
Q ss_pred cccccccccEEEccCCcC
Q psy1672 190 SVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 190 ~~~~l~~L~~L~l~~N~~ 207 (600)
.+..+++|+.|++..|..
T Consensus 167 ~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp TTTTCSEEEEEEEECSBS
T ss_pred hhhccccCceEecccCcc
Confidence 888889999999988864
No 42
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.76 E-value=4.6e-18 Score=188.77 Aligned_cols=176 Identities=19% Similarity=0.204 Sum_probs=137.2
Q ss_pred HHHHhhhcCCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecc
Q psy1672 6 VFFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC 85 (600)
Q Consensus 6 ~l~~~~~~~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n 85 (600)
+++.++.....|+..|.|.. .+.++|.+.+++.+|..++.. +++|+|++|.|+.+++..|. ++++|++|+|++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~---~~~l~ls~~~L~~ip~~~~~~-L~~L~Ls~N~i~~~~~~~~~--~l~~L~~L~Ls~N 86 (562)
T 3a79_B 13 HFVCALALIVGSMTPFSNEL---ESMVDYSNRNLTHVPKDLPPR-TKALSLSQNSISELRMPDIS--FLSELRVLRLSHN 86 (562)
T ss_dssp -----------------------CCEEECTTSCCCSCCTTSCTT-CCEEECCSSCCCCCCGGGTT--TCTTCCEEECCSC
T ss_pred HHHHHHHHHhccccccccCC---CcEEEcCCCCCccCCCCCCCC-cCEEECCCCCccccChhhhc--cCCCccEEECCCC
Confidence 34444455567777788874 378999999999999988765 99999999999999988887 8999999999999
Q ss_pred cCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccC-cccccCCCCcceeeCCCCcCcccCh
Q psy1672 86 HIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE-KGAFQFVPGLVKLDMSESRLEHISP 164 (600)
Q Consensus 86 ~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~-~~~~~~l~~L~~L~Ls~n~l~~i~~ 164 (600)
.++.+.+.+|.++++|++|+|++|.|+.++.. .+++|++|+|++|.++.+. +..|..+++|+.|++++|.+....
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~- 162 (562)
T 3a79_B 87 RIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD- 162 (562)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT-
T ss_pred CCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCc-
Confidence 99999999999999999999999999999885 7899999999999999876 468999999999999999998753
Q ss_pred hhhcCCCCC--CEEEcCCCcC--CCCCcccccc
Q psy1672 165 EAFTGAKSL--ESIKLNGNRL--SHFPVRSVEP 193 (600)
Q Consensus 165 ~~~~~l~~L--~~L~Ls~N~l--~~l~~~~~~~ 193 (600)
+..+.+| +.|++++|.+ ....+..+..
T Consensus 163 --~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~ 193 (562)
T 3a79_B 163 --LLPVAHLHLSCILLDLVSYHIKGGETESLQI 193 (562)
T ss_dssp --TGGGTTSCEEEEEEEESSCCCCSSSCCEEEE
T ss_pred --hhhhhhceeeEEEeecccccccccCcccccc
Confidence 4455555 9999999998 5554444444
No 43
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.75 E-value=1e-17 Score=166.37 Aligned_cols=153 Identities=24% Similarity=0.399 Sum_probs=144.7
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
.++++++++.++.+|.... .+|+.|+|++|++..+.+.+|.++++|++|+|++|.|+.+++..|..+++|++|+|
T Consensus 16 ~~~l~~~~~~l~~~p~~~~-----~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 16 KKEVDCQGKSLDSVPSGIP-----ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GTEEECTTCCCSSCCSCCC-----TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CeEEecCCCCccccCCCCC-----CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 6789999999999997653 58999999999999999999999999999999999999999988999999999999
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
++|.++.+.+..|..+++|+.|+|++|+|+.+++..|..+++|+.|+|++|.|+.++...|..+++|+.|++.+|.+.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 999999999889999999999999999999999888999999999999999999999888999999999999999865
No 44
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.75 E-value=4.2e-18 Score=188.20 Aligned_cols=203 Identities=25% Similarity=0.383 Sum_probs=144.6
Q ss_pred eEEEccCCCCCccCCCC--CCCCceEEEeeCCCCCCC-ChhhhcccCCCCccEEEeecccCcccCc--cccCCCCCccEE
Q psy1672 30 QWMECRDKFLITIPEAP--ESELTQVLDMSGNNLQIL-PKEAFRRAGLLNLQKLFLARCHIGQIDS--GALDGLTNLIEI 104 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~--~~~~l~~L~Ls~n~L~~l-~~~~f~~~~l~~L~~L~L~~n~l~~i~~--~~f~~l~~L~~L 104 (600)
+.++..+..+..+|..+ ....+++|+|++|.+... +........+++|+.|+|++|.++.++. ..|..+++|++|
T Consensus 313 ~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L 392 (549)
T 2z81_A 313 KRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSL 392 (549)
T ss_dssp CEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEE
T ss_pred eEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEE
Confidence 34555566666666533 123377788888777642 2211111256777777777777776643 446777778888
Q ss_pred EccCCCCCCCCccccCCCCCCCEEEccCCCCCccCccc-----------------ccCCCCcceeeCCCCcCcccChhhh
Q psy1672 105 DLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGA-----------------FQFVPGLVKLDMSESRLEHISPEAF 167 (600)
Q Consensus 105 ~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~-----------------~~~l~~L~~L~Ls~n~l~~i~~~~~ 167 (600)
+|++|.|+.++. .+..+++|++|+|++|.++.++... +..+++|+.|+|++|+|+.++. .
T Consensus 393 ~Ls~N~l~~lp~-~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~ip~--~ 469 (549)
T 2z81_A 393 DISRNTFHPMPD-SCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPD--A 469 (549)
T ss_dssp ECTTCCCCCCCS-CCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCC--G
T ss_pred ECCCCCCccCCh-hhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCcCCC--c
Confidence 888887777765 4566667777777777766543321 1367889999999999998865 4
Q ss_pred cCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCccccc-cccchhhhcccCCCC-CCCCCCCC
Q psy1672 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLADKKNVP-VQPACTGP 235 (600)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~~~~~~~-~~~~C~~p 235 (600)
..+++|+.|+|++|+++.+++..+..+++|+.|++++|+|.|+|. +.++..|+....... ....|..|
T Consensus 470 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~l~~~l~~~~~~~~~~~~C~~~ 539 (549)
T 2z81_A 470 SLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGS 539 (549)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHHHHHHHHHHCTTTEESCCBBTTT
T ss_pred ccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccHHHHHHHHHhcccccCCCCeECCC
Confidence 568999999999999999998889999999999999999999998 577788987443222 45678765
No 45
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.75 E-value=1.6e-17 Score=166.77 Aligned_cols=153 Identities=24% Similarity=0.380 Sum_probs=143.5
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
.+.++++++.++.+|... ..+|+.|+|++|+++.+++.+|.++++|++|+|++|.|+.++...|..+++|++|+|
T Consensus 18 ~~~l~~~~~~l~~ip~~~-----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 18 KNSVDCSSKKLTAIPSNI-----PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTEEECTTSCCSSCCSCC-----CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCEEEccCCCCCccCCCC-----CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 678999999999999754 358999999999999999889999999999999999999999988999999999999
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
++|.++.++...|..+++|+.|+|++|.++.+.+..|..+++|+.|+|++|.+..++...|..+++|+.|++.+|.+.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 170 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK 170 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc
Confidence 999999998888999999999999999999999999999999999999999999999888899999999999999764
No 46
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.73 E-value=1.8e-17 Score=155.31 Aligned_cols=136 Identities=27% Similarity=0.532 Sum_probs=92.1
Q ss_pred CCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEc
Q psy1672 99 TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKL 178 (600)
Q Consensus 99 ~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~L 178 (600)
++|++|+|++|.++.++...|..+++|++|+|++|.++.+.+..|..+++|+.|+|++|+|+.+++..|..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34555555555555555544555555555555555555555555556666666666666666666666667777888888
Q ss_pred CCCcCCCCCcccccccccccEEEccCCcCccccc-cccchhhhcccCCCC-CCCCCCC
Q psy1672 179 NGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLADKKNVP-VQPACTG 234 (600)
Q Consensus 179 s~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~~~~~~~-~~~~C~~ 234 (600)
++|.++.++...+..+++|+.|++.+|+|.|+|. +.++..|+....... ....|..
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~l~~~~~~~~~~~~~~~~C~~ 165 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSG 165 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHHHHHTGGGEESCCBBTT
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCccHHHHHHHHhhCccccccCcEeCC
Confidence 8888888777777788899999999999999997 788889987443222 4456664
No 47
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=193.43 Aligned_cols=180 Identities=26% Similarity=0.282 Sum_probs=154.3
Q ss_pred CCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecc-cCcccCccccCCC
Q psy1672 20 TCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGALDGL 98 (600)
Q Consensus 20 ~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n-~l~~i~~~~f~~l 98 (600)
.|.|. ...++|.+.+++.||. ++.. +++|+|++|.|+.+....|. ++.+|+.|+|++| .+..+.+.+|.++
T Consensus 1 ~C~~~----~~~~dcs~~~L~~vP~-lp~~-l~~LdLs~N~i~~i~~~~~~--~l~~L~~LdLs~n~~~~~i~~~~f~~L 72 (844)
T 3j0a_A 1 SCSFD----GRIAFYRFCNLTQVPQ-VLNT-TERLLLSFNYIRTVTASSFP--FLEQLQLLELGSQYTPLTIDKEAFRNL 72 (844)
T ss_dssp CCBTT----TEEEEESCCCSSCCCS-SCTT-CCEEEEESCCCCEECSSSCS--SCCSCSEEEECTTCCCCEECTTTTSSC
T ss_pred CceEe----ceEEEccCCCCCCCCC-CCCC-cCEEECCCCcCCccChhHCc--ccccCeEEeCCCCCCccccCHHHhcCC
Confidence 47776 4789999999999999 6665 99999999999999888887 8999999999999 5677888899999
Q ss_pred CCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccC--cccccCCCCcceeeCCCCcCcccCh-hhhcCCCCCCE
Q psy1672 99 TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE--KGAFQFVPGLVKLDMSESRLEHISP-EAFTGAKSLES 175 (600)
Q Consensus 99 ~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~--~~~~~~l~~L~~L~Ls~n~l~~i~~-~~~~~l~~L~~ 175 (600)
++|++|+|++|.|+.+.+..|..+++|++|+|++|.++... ...|..+++|+.|+|++|.+..+.+ ..|+++++|+.
T Consensus 73 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~ 152 (844)
T 3j0a_A 73 PNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKS 152 (844)
T ss_dssp TTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCE
T ss_pred CCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCE
Confidence 99999999999999998889999999999999999998733 3458899999999999999988754 57899999999
Q ss_pred EEcCCCcCCCCCccccccc--ccccEEEccCCcC
Q psy1672 176 IKLNGNRLSHFPVRSVEPL--LKLMMIELHDNPW 207 (600)
Q Consensus 176 L~Ls~N~l~~l~~~~~~~l--~~L~~L~l~~N~~ 207 (600)
|+|++|.+..+....+..+ .+|+.|++.+|.+
T Consensus 153 L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l 186 (844)
T 3j0a_A 153 IDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186 (844)
T ss_dssp EEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBS
T ss_pred EECCCCcCCeeCHHHcccccCCccceEECCCCcc
Confidence 9999999988776666555 4555555555543
No 48
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.73 E-value=3.5e-17 Score=173.07 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=19.2
Q ss_pred cccccccEEEccCCcCccccccccchhhhc
Q psy1672 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWLA 221 (600)
Q Consensus 192 ~~l~~L~~L~l~~N~~~C~C~l~~l~~w~~ 221 (600)
..+++|+.|++.+|+|.|+|...++..|..
T Consensus 336 ~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~ 365 (390)
T 3o6n_A 336 STHHTLKNLTLSHNDWDCNSLRALFRNVAR 365 (390)
T ss_dssp CTTCCCSEEECCSSCEEHHHHHHHTTTCCT
T ss_pred hhhccCCEEEcCCCCccchhHHHHHHHHHh
Confidence 445566777777777777776655554433
No 49
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.73 E-value=5.8e-18 Score=187.77 Aligned_cols=183 Identities=28% Similarity=0.443 Sum_probs=141.3
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCc-cccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEE
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS-GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLN 129 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~-~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 129 (600)
+++|++++|.+..++.. |. .+.+|+.|++++|.+..+.+ ..|..+++|++|+|++|.++.+.+..|..+++|++|+
T Consensus 375 L~~L~l~~n~l~~~~~~-~~--~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 375 LKYLDLSFNGVITMSSN-FL--GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp CCEEECCSCSEEEEEEE-EE--TCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred cCEEECCCCcccccccc-cc--ccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 44444444444444433 32 56666666666666655533 4577788888888888888877777788888899999
Q ss_pred ccCCCCC-ccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 130 LARNPIS-KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 130 Ls~N~i~-~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
|++|.++ ...+..|..+++|+.|+|++|+++.+.+..|..+++|+.|+|++|.++.++...|..+++|+.|++.+|+|.
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 9999886 334567888999999999999999998889999999999999999999999888999999999999999999
Q ss_pred cccccccch-hhhcccCC-CCCCCCCCCCc
Q psy1672 209 CDCNMRSIK-MWLADKKN-VPVQPACTGPE 236 (600)
Q Consensus 209 C~C~l~~l~-~w~~~~~~-~~~~~~C~~p~ 236 (600)
|+|...|+. .|+..... +.....|..|.
T Consensus 532 ~~~~~~~~~~~wl~~~~~~~~~~~~C~~~~ 561 (570)
T 2z63_A 532 CSCPRIDYLSRWLNKNSQKEQGSAKCSGSG 561 (570)
T ss_dssp CCTTTTHHHHHHHHHTGGGEESCCBBTTTC
T ss_pred CCCcchHHHHHHHHhccccCCCchhhCCCC
Confidence 999998887 99885322 22333787663
No 50
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.72 E-value=3.3e-17 Score=171.68 Aligned_cols=152 Identities=27% Similarity=0.344 Sum_probs=141.1
Q ss_pred eEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccC-CCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD-GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 52 ~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~-~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
+.++++++.|+.+|...+ ..|+.|+|++|+|+.+.+..|. ++++|++|+|++|+|+.+++..|..+++|++|+|
T Consensus 21 ~~l~c~~~~l~~iP~~~~-----~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLP-----SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp TEEECCSSCCSSCCSSCC-----TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEEEeCCCCcCccCccCC-----CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 579999999999998654 4689999999999999998888 9999999999999999999989999999999999
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccc---cccccccEEEccCCcC
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV---EPLLKLMMIELHDNPW 207 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~---~~l~~L~~L~l~~N~~ 207 (600)
++|.|+.+.+..|..+++|+.|+|++|+|..+.+..|..+++|+.|+|++|.|+.++...| ..+++|+.|++++|.+
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 9999999998899999999999999999999999999999999999999999999998777 5689999999999987
Q ss_pred c
Q psy1672 208 V 208 (600)
Q Consensus 208 ~ 208 (600)
.
T Consensus 176 ~ 176 (361)
T 2xot_A 176 K 176 (361)
T ss_dssp C
T ss_pred C
Confidence 6
No 51
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.72 E-value=9.4e-17 Score=162.26 Aligned_cols=146 Identities=30% Similarity=0.440 Sum_probs=119.6
Q ss_pred eEEEccCCCCCccCC-CC-CCCCceEEEeeCCC-CCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEc
Q psy1672 30 QWMECRDKFLITIPE-AP-ESELTQVLDMSGNN-LQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~-~~-~~~~l~~L~Ls~n~-L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~L 106 (600)
+.++..+..++.++. .+ ....+++|+|++|. +..++...|. .+.+|+.|+|++|.++.+.+..|.++++|++|+|
T Consensus 59 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 136 (285)
T 1ozn_A 59 TILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFH--GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYL 136 (285)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTT--TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhc--CCcCCCEEECCCCcCCEECHhHhhCCcCCCEEEC
Confidence 344555555555532 11 11337777777776 7777666665 6888888888888888888888899999999999
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEE
Q psy1672 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIK 177 (600)
Q Consensus 107 s~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~ 177 (600)
++|.++.++...|..+++|++|+|++|.++.+....|..+++|+.|+|++|.+..+.+..|..+++|+.|+
T Consensus 137 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 207 (285)
T 1ozn_A 137 QDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (285)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEee
Confidence 99999999988899999999999999999999888899999999999999999999889999999999985
No 52
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.71 E-value=1.3e-16 Score=164.67 Aligned_cols=171 Identities=24% Similarity=0.337 Sum_probs=94.9
Q ss_pred eEEEccCCCCCcc-CCCCC-CCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEcc
Q psy1672 30 QWMECRDKFLITI-PEAPE-SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107 (600)
Q Consensus 30 ~~v~C~~~~L~~i-p~~~~-~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls 107 (600)
+.++..+..+..+ |..+. ...+++|+|++|.|+.++...+ .+|+.|++++|.++.+.+..|.++++|++|+|+
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~-----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 79 HTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP-----KTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCC-----TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhc-----ccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 3455555555555 22221 1236666666666666655432 356666666666666655556666666666666
Q ss_pred CCCCCC--CCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCC
Q psy1672 108 DNLLTS--IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSH 185 (600)
Q Consensus 108 ~N~l~~--l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 185 (600)
+|.++. +....|..+++|++|++++|.++.++...+ ++|+.|++++|.+..+.+..|..+++|+.|+|++|.+..
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 665543 333445555566666666666555543322 455556666666555555555555566666666665555
Q ss_pred CCcccccccccccEEEccCCcCc
Q psy1672 186 FPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 186 l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
++...+..+++|+.|++.+|.+.
T Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 231 VDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ECTTTGGGSTTCCEEECCSSCCS
T ss_pred eChhhccCCCCCCEEECCCCcCc
Confidence 55545555555666666555543
No 53
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.71 E-value=6.7e-17 Score=170.93 Aligned_cols=174 Identities=23% Similarity=0.345 Sum_probs=152.7
Q ss_pred eEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCC
Q psy1672 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N 109 (600)
..+.+........+..+....+++|++++|.++.+|...|. .+++|+.|+|++|.+..+.+.+|..+++|++|+|++|
T Consensus 26 ~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 103 (390)
T 3o6n_A 26 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLD--SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFN 103 (390)
T ss_dssp CEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHH--HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred eeeecccccccccccccccCCceEEEecCCchhhCChhHhc--ccccCcEEECCCCcccccChhhccCCCCcCEEECCCC
Confidence 34455555555555555555699999999999999999887 7999999999999999999889999999999999999
Q ss_pred CCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcc
Q psy1672 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189 (600)
Q Consensus 110 ~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 189 (600)
.++.+++..|..+++|++|+|++|.++.++...|..+++|+.|++++|.+..+.+..|..+++|+.|++++|.++.++
T Consensus 104 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-- 181 (390)
T 3o6n_A 104 AIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-- 181 (390)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--
T ss_pred CCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--
Confidence 999999888999999999999999999998888899999999999999999999989999999999999999999885
Q ss_pred cccccccccEEEccCCcCc
Q psy1672 190 SVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 190 ~~~~l~~L~~L~l~~N~~~ 208 (600)
+..+++|+.+++.+|.+.
T Consensus 182 -~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 182 -LSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp -GGGCTTCSEEECCSSCCS
T ss_pred -cccccccceeeccccccc
Confidence 455677888888887654
No 54
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=6.7e-17 Score=162.43 Aligned_cols=154 Identities=23% Similarity=0.360 Sum_probs=142.6
Q ss_pred CCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEE
Q psy1672 49 ELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDL 128 (600)
Q Consensus 49 ~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L 128 (600)
..++.|++++|.++.++. +. .+++|+.|+|++|.+..++ .+..+++|++|+|++|.|+.+++..|..+++|++|
T Consensus 41 ~~L~~L~l~~~~i~~~~~--l~--~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 114 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSVQG--IQ--YLPNVRYLALGGNKLHDIS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114 (272)
T ss_dssp TTCCEEECTTSCCCCCTT--GG--GCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cceeeeeeCCCCcccccc--cc--cCCCCcEEECCCCCCCCch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEE
Confidence 349999999999998874 33 6999999999999999874 58999999999999999999999889999999999
Q ss_pred EccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 129 NLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 129 ~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|++|.++.+.+..|..+++|+.|+|++|.++.+.+..|..+++|+.|+|++|.++.++...+..+++|+.|++.+|.+.
T Consensus 115 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 99999999998888999999999999999999999888999999999999999999999888899999999999999865
No 55
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.70 E-value=1.8e-16 Score=152.51 Aligned_cols=110 Identities=25% Similarity=0.404 Sum_probs=81.2
Q ss_pred CCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEc
Q psy1672 99 TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKL 178 (600)
Q Consensus 99 ~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~L 178 (600)
++|++|+|++|.|+.++...|..+++|++|+|++|.++.+.+..|..+++|+.|+|++|+++.+++..|..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 35556666666666555555556666666666666666665555666677777777777777776667778888999999
Q ss_pred CCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 179 NGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 179 s~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
++|.+..++...|..+++|+.|++.+|.+.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccc
Confidence 999999988888889999999999999865
No 56
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=1.5e-16 Score=177.87 Aligned_cols=104 Identities=25% Similarity=0.341 Sum_probs=53.9
Q ss_pred EEEccCCCCCccCCC--CCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 31 WMECRDKFLITIPEA--PESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 31 ~v~C~~~~L~~ip~~--~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
.++..+..+..++.. .....|++|+|++|.|+.+++..|. ++++|+.|+|++|.|+.+++..|.++++|++|+|++
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~ 156 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ--NVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSN 156 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHc--CCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeC
Confidence 445555555555431 1122355555555555555555544 455555555555555555555555555555555555
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCC
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPIS 136 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~ 136 (600)
|.|+.+++..|..+++|++|+|++|.++
T Consensus 157 N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 157 NNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 5555555544555555555555555443
No 57
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.70 E-value=1.8e-16 Score=163.96 Aligned_cols=171 Identities=24% Similarity=0.310 Sum_probs=86.6
Q ss_pred EEEccCCCCCccCC-CC-CCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 31 WMECRDKFLITIPE-AP-ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 31 ~v~C~~~~L~~ip~-~~-~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
.++..+..++.++. .+ ....+++|+|++|.++.++...+ .+|++|++++|.++.+++..|.++++|++|++++
T Consensus 82 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~-----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 156 (332)
T 2ft3_A 82 ALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP-----SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGG 156 (332)
T ss_dssp EEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC-----TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCS
T ss_pred EEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc-----ccCCEEECCCCccCccCHhHhCCCccCCEEECCC
Confidence 44555555555422 11 11235666666666655554432 4555666666655555555555555666666655
Q ss_pred CCCCC--CCccccCCC--------------------CCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhh
Q psy1672 109 NLLTS--IPSLTFQSV--------------------RFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEA 166 (600)
Q Consensus 109 N~l~~--l~~~~f~~l--------------------~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~ 166 (600)
|.++. +.+..|..+ ++|++|+|++|.++.+.+..|..+++|+.|+|++|.+..+.+..
T Consensus 157 n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 236 (332)
T 2ft3_A 157 NPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS 236 (332)
T ss_dssp CCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTG
T ss_pred CccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhH
Confidence 55542 333344444 34444555555555444444555555555555555555554444
Q ss_pred hcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcC
Q psy1672 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 207 (600)
+..+++|+.|+|++|.+..++. .+..+++|+.|++.+|.+
T Consensus 237 ~~~l~~L~~L~L~~N~l~~lp~-~l~~l~~L~~L~l~~N~l 276 (332)
T 2ft3_A 237 LSFLPTLRELHLDNNKLSRVPA-GLPDLKLLQVVYLHTNNI 276 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCT-TGGGCTTCCEEECCSSCC
T ss_pred hhCCCCCCEEECCCCcCeecCh-hhhcCccCCEEECCCCCC
Confidence 5555555555555555554442 244445555555555543
No 58
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.69 E-value=3.1e-16 Score=160.58 Aligned_cols=167 Identities=19% Similarity=0.294 Sum_probs=142.8
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.+++.+..+..++.......+++|+|++|.+..++. +. .+++|+.|+|++|.++.++ .|..+++|++|+|++
T Consensus 43 L~~L~l~~~~i~~l~~~~~l~~L~~L~L~~n~i~~~~~--~~--~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 43 ITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LK--NLTKITELELSGNPLKNVS--AIAGLQSIKTLDLTS 116 (308)
T ss_dssp CCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GT--TCCSCCEEECCSCCCSCCG--GGTTCTTCCEEECTT
T ss_pred cCEEEeeCCCccCchhhhccCCCCEEEccCCcCCCChh--Hc--cCCCCCEEEccCCcCCCch--hhcCCCCCCEEECCC
Confidence 45788888888888765444559999999999998887 44 7999999999999998874 488999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.|+.++. +..+++|+.|+|++|.++.+.+ +..+++|+.|+|++|.+..+.+ +..+++|+.|+|++|.++.++.
T Consensus 117 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 117 TQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCCCchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh
Confidence 99998865 8889999999999999988755 7889999999999999998855 8889999999999999998874
Q ss_pred ccccccccccEEEccCCcCcc
Q psy1672 189 RSVEPLLKLMMIELHDNPWVC 209 (600)
Q Consensus 189 ~~~~~l~~L~~L~l~~N~~~C 209 (600)
+..+++|+.|++++|.+..
T Consensus 191 --l~~l~~L~~L~L~~N~l~~ 209 (308)
T 1h6u_A 191 --LASLPNLIEVHLKNNQISD 209 (308)
T ss_dssp --GGGCTTCCEEECTTSCCCB
T ss_pred --hcCCCCCCEEEccCCccCc
Confidence 7888899999999998654
No 59
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.69 E-value=1.2e-16 Score=149.10 Aligned_cols=117 Identities=32% Similarity=0.516 Sum_probs=96.0
Q ss_pred CCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcccc
Q psy1672 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGAL 95 (600)
Q Consensus 16 ~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f 95 (600)
+||..|.|.+ ..++|.+.+++.+|..++.. +++|+|++|.|+.+++..|. ++.+|+.|+|++|+|+.+++..|
T Consensus 2 ~CP~~C~C~~----~~l~~s~n~l~~ip~~~~~~-l~~L~L~~N~i~~~~~~~~~--~l~~L~~L~Ls~N~l~~l~~~~f 74 (170)
T 3g39_A 2 ACPSQCSCSG----TTVDCSGKSLASVPTGIPTT-TQVLYLYDNQITKLEPGVFD--RLTQLTRLDLDNNQLTVLPAGVF 74 (170)
T ss_dssp CCC-CCEEET----TEEECTTSCCSSCCSCCCTT-CSEEECCSSCCCCCCTTTTT--TCTTCSEEECCSSCCCCCCTTTT
T ss_pred cCcCcCCcCC----CEEEeCCCCcCccCccCCCC-CcEEEcCCCcCCccChhhhc--CcccCCEEECCCCCcCccChhhc
Confidence 6999999986 46999999999999877655 88899999998888777776 78888888888888888888778
Q ss_pred CCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccC
Q psy1672 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139 (600)
Q Consensus 96 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~ 139 (600)
.++++|++|+|++|+|+.+++..|..+++|+.|+|++|++...+
T Consensus 75 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 75 DKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred cCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 88888888888888888888777777888888888888776553
No 60
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.69 E-value=8.3e-17 Score=165.23 Aligned_cols=173 Identities=20% Similarity=0.301 Sum_probs=87.7
Q ss_pred CCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCC---CChhhhcccCCCCccEEEeec-ccCcccCccc
Q psy1672 19 STCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQI---LPKEAFRRAGLLNLQKLFLAR-CHIGQIDSGA 94 (600)
Q Consensus 19 ~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~---l~~~~f~~~~l~~L~~L~L~~-n~l~~i~~~~ 94 (600)
..|.|.|.+ |.|..... .. .++.|+|++|.+.. ++.. |. .+++|++|+|++ |.+....+..
T Consensus 32 ~~C~~~w~g----v~C~~~~~-------~~-~l~~L~L~~~~l~~~~~~~~~-l~--~l~~L~~L~L~~~n~l~~~~p~~ 96 (313)
T 1ogq_A 32 DCCNRTWLG----VLCDTDTQ-------TY-RVNNLDLSGLNLPKPYPIPSS-LA--NLPYLNFLYIGGINNLVGPIPPA 96 (313)
T ss_dssp CTTTTCSTT----EEECCSSS-------CC-CEEEEEEECCCCSSCEECCGG-GG--GCTTCSEEEEEEETTEESCCCGG
T ss_pred CCCcCCCcc----eEeCCCCC-------Cc-eEEEEECCCCCccCCcccChh-Hh--CCCCCCeeeCCCCCcccccCChh
Confidence 456666876 67753210 01 15555555555553 3332 22 455555555552 5554444444
Q ss_pred cCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCC-CC
Q psy1672 95 LDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK-SL 173 (600)
Q Consensus 95 f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~-~L 173 (600)
|..+++|++|+|++|.++...+..|..+++|++|+|++|.++...+..|..+++|+.|+|++|++....+..+..+. +|
T Consensus 97 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L 176 (313)
T 1ogq_A 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF 176 (313)
T ss_dssp GGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTC
T ss_pred HhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcC
Confidence 55555555555555555533333455555555555555555544444455555555555555555533344444444 55
Q ss_pred CEEEcCCCcCCCCCcccccccccccEEEccCCcC
Q psy1672 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 174 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 207 (600)
+.|+|++|.+....+..+..+. |+.|++.+|.+
T Consensus 177 ~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 177 TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp CEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred cEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 5555555555533333444443 55555555543
No 61
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.69 E-value=1.7e-16 Score=161.05 Aligned_cols=150 Identities=25% Similarity=0.310 Sum_probs=122.6
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
+++|+++++.|+.+|...+ .+|+.|+|++|.++.+.+..|..+++|++|+|++|.|+.++.. ..+++|++|+|
T Consensus 12 l~~l~~~~~~l~~ip~~~~-----~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~L 84 (290)
T 1p9a_G 12 HLEVNCDKRNLTALPPDLP-----KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDL 84 (290)
T ss_dssp CCEEECTTSCCSSCCSCCC-----TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEEC
T ss_pred ccEEECCCCCCCcCCCCCC-----CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEEC
Confidence 8999999999999997654 5899999999999999888999999999999999999887653 56777888888
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
++|.++.++ ..+..+++|+.|+|++|+|+.+++..|.++++|+.|+|++|+|+.++...|..+++|+.|++.+|.+.
T Consensus 85 s~N~l~~l~-~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 85 SHNQLQSLP-LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp CSSCCSSCC-CCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCcCCcCc-hhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 888877664 35667777888888888888777777777778888888888887777777777777778887777654
No 62
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.68 E-value=3.3e-16 Score=161.85 Aligned_cols=175 Identities=21% Similarity=0.229 Sum_probs=145.9
Q ss_pred CceEEEccCCCCCccCCCCC-CCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEc
Q psy1672 28 GKQWMECRDKFLITIPEAPE-SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106 (600)
Q Consensus 28 ~~~~v~C~~~~L~~ip~~~~-~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~L 106 (600)
....++..+..+..+|..+. ...+++|+|++|.|+.+|.... .+.+|++|+|++|.++.++ ..|..+++|++|+|
T Consensus 82 ~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~---~l~~L~~L~Ls~n~l~~lp-~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 82 GRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLMELPDTMQ---QFAGLETLTLARNPLRALP-ASIASLNRLRELSI 157 (328)
T ss_dssp TCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCCCCCSCGG---GGTTCSEEEEESCCCCCCC-GGGGGCTTCCEEEE
T ss_pred ceeEEEccCCCchhcChhhhhCCCCCEEECCCCCccchhHHHh---ccCCCCEEECCCCccccCc-HHHhcCcCCCEEEC
Confidence 35678999999999997543 3459999999999999887654 6999999999999999874 45899999999999
Q ss_pred cCCCCC-CCCccc--------cCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEE
Q psy1672 107 SDNLLT-SIPSLT--------FQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIK 177 (600)
Q Consensus 107 s~N~l~-~l~~~~--------f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~ 177 (600)
++|++. .++... |..+++|++|+|++|.++.++ ..|..+++|+.|+|++|.+..+++ .+..+++|+.|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp-~~l~~l~~L~~L~L~~N~l~~l~~-~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLP-ASIANLQNLKSLKIRNSPLSALGP-AIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCC-GGGGGCTTCCEEEEESSCCCCCCG-GGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcch-HhhcCCCCCCEEEccCCCCCcCch-hhccCCCCCEEE
Confidence 997554 454421 334899999999999999774 458899999999999999998855 588999999999
Q ss_pred cCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 178 LNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 178 Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
|++|.+....+..+..+++|+.|++.+|.+.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 266 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNL 266 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCch
Confidence 9998888776778888999999999998754
No 63
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.68 E-value=2.6e-16 Score=159.79 Aligned_cols=167 Identities=22% Similarity=0.314 Sum_probs=130.6
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.+++.+..+..++.......+++|+|++|.++.++. +. .+.+|+.|+|++|.++.++. +..+++|++|+|++
T Consensus 48 L~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~l~~~~~--l~--~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 48 IDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LA--NLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEH 121 (291)
T ss_dssp CCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GT--TCTTCCEEECCSSCCCCGGG--GTTCTTCCEEECTT
T ss_pred ccEEEccCCCcccChhHhcCCCCCEEEccCCccCCCcc--cc--cCCCCCEEECCCCcCCCChh--hccCCCCCEEECCC
Confidence 35677777778777654444458888888888888776 43 68888888888888887643 78888888888888
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.|+.++ .+..+++|+.|+|++|.++.+ ..+..+++|+.|+|++|++..+.+ +..+++|+.|+|++|.++.++
T Consensus 122 n~i~~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~- 194 (291)
T 1h6t_A 122 NGISDIN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR- 194 (291)
T ss_dssp SCCCCCG--GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG-
T ss_pred CcCCCCh--hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCCh-
Confidence 8888874 467788888888888888877 457788888888888888888754 778888888888888888875
Q ss_pred ccccccccccEEEccCCcCcc
Q psy1672 189 RSVEPLLKLMMIELHDNPWVC 209 (600)
Q Consensus 189 ~~~~~l~~L~~L~l~~N~~~C 209 (600)
.+..+++|+.|++.+|++.+
T Consensus 195 -~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 195 -ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GGTTCTTCSEEEEEEEEEEC
T ss_pred -hhccCCCCCEEECcCCcccC
Confidence 37778888888888887543
No 64
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.68 E-value=2.2e-16 Score=147.73 Aligned_cols=120 Identities=31% Similarity=0.558 Sum_probs=96.1
Q ss_pred cCCCCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCc
Q psy1672 13 SVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS 92 (600)
Q Consensus 13 ~~~~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~ 92 (600)
+..+||..|.|. ...++|.+.++..+|..++.. +++|+|++|.|+.+++..|. ++.+|+.|+|++|+|+.+++
T Consensus 2 ~~~~CP~~C~C~----~~~l~~~~n~l~~iP~~~~~~-L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~i~~ 74 (174)
T 2r9u_A 2 HSAGCPSQCSCD----QTLVNCQNIRLASVPAGIPTD-KQRLWLNNNQITKLEPGVFD--HLVNLQQLYFNSNKLTAIPT 74 (174)
T ss_dssp CCCSSCTTSEEC----SSEEECCSSCCSSCCSCCCTT-CSEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCT
T ss_pred CCCCCCCCCEEC----CcEEEeCCCCCCccCCCcCCC-CcEEEeCCCCccccCHHHhc--CCcCCCEEECCCCCCCccCh
Confidence 456899999997 467999999999999877755 88888888888888777776 67888888888888888877
Q ss_pred cccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccC
Q psy1672 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139 (600)
Q Consensus 93 ~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~ 139 (600)
..|.++++|++|+|++|+|+.+++..|..+++|+.|+|++|++...+
T Consensus 75 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 75 GVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred hHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 77777888888888888888777766777777777777777776553
No 65
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.68 E-value=2.3e-16 Score=176.38 Aligned_cols=174 Identities=23% Similarity=0.345 Sum_probs=152.0
Q ss_pred eEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCC
Q psy1672 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N 109 (600)
..+.|........+..+....++.|++++|.+..+|...|. .+++|+.|+|++|.+..+.+..|..+++|++|+|++|
T Consensus 32 ~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 109 (597)
T 3oja_B 32 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLD--SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFN 109 (597)
T ss_dssp CEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHH--HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHc--cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCC
Confidence 34566555555555555555699999999999999999887 7999999999999999999889999999999999999
Q ss_pred CCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcc
Q psy1672 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189 (600)
Q Consensus 110 ~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 189 (600)
.|+.+++..|..+++|++|+|++|.++.+++..|..+++|+.|+|++|.+..+.+..|..+++|+.|+|++|.+..++
T Consensus 110 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-- 187 (597)
T 3oja_B 110 AIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-- 187 (597)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--
T ss_pred cCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--
Confidence 999999988999999999999999999998888899999999999999999999999999999999999999999886
Q ss_pred cccccccccEEEccCCcCc
Q psy1672 190 SVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 190 ~~~~l~~L~~L~l~~N~~~ 208 (600)
+..+++|+.|++.+|.+.
T Consensus 188 -~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 188 -LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp -GGGCTTCSEEECCSSCCS
T ss_pred -hhhhhhhhhhhcccCccc
Confidence 344567777777777654
No 66
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.68 E-value=2e-16 Score=147.49 Aligned_cols=121 Identities=28% Similarity=0.500 Sum_probs=104.3
Q ss_pred ccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCC
Q psy1672 101 LIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNG 180 (600)
Q Consensus 101 L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 180 (600)
.+.|++++|.|+.+|... ..+|+.|+|++|.|+.+.+..|..+++|+.|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~ip~~~---~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGI---PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCccCccC---CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467888888888887643 26788888888888888888888888899999999999888888888899999999999
Q ss_pred CcCCCCCcccccccccccEEEccCCcCccccc-cccchhhhcccC
Q psy1672 181 NRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLADKK 224 (600)
Q Consensus 181 N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~~~~ 224 (600)
|+|+.++...|..+++|+.|++.+|+|.|+|. +.++..|+....
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l~~~l~~~~ 132 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHP 132 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHHHHHHHHCG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHHHHHHHhCc
Confidence 99999988888999999999999999999995 999999988543
No 67
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.67 E-value=4e-16 Score=148.85 Aligned_cols=147 Identities=15% Similarity=0.210 Sum_probs=130.2
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
++.|++++|.++.++ . +. .+++|+.|++++|.+..+. .|..+++|++|+|++|.++......|..+++|++|+|
T Consensus 46 L~~L~l~~n~i~~l~-~-l~--~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 46 LTYITLANINVTDLT-G-IE--YAHNIKDLTINNIHATNYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp CCEEEEESSCCSCCT-T-GG--GCTTCSEEEEESCCCSCCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred ccEEeccCCCccChH-H-Hh--cCCCCCEEEccCCCCCcch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 899999999999988 3 33 6999999999999887764 5899999999999999999755557899999999999
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCc-CcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcC
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESR-LEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~-l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 207 (600)
++|.++...+..|..+++|+.|++++|. +..++ .+..+++|+.|++++|.++.++ .+..+++|+.|++.+|++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC--
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCccc
Confidence 9999998667788999999999999998 88884 6889999999999999999986 688899999999999985
No 68
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.67 E-value=3.5e-16 Score=160.17 Aligned_cols=167 Identities=22% Similarity=0.352 Sum_probs=148.0
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.++..+..+..++.......+++|+|++|.++.++ .+. .+.+|+.|+|++|.++.+++ |..+++|++|+|++
T Consensus 65 L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~--~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~ 138 (308)
T 1h6u_A 65 LIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVS--AIA--GLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDL 138 (308)
T ss_dssp CCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCG--GGT--TCTTCCEEECTTSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEEccCCcCCCChhHccCCCCCEEEccCCcCCCch--hhc--CCCCCCEEECCCCCCCCchh--hcCCCCCCEEECCC
Confidence 4678888888988886444455999999999999986 344 79999999999999999864 89999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.++.++. +..+++|+.|+|++|.++.+.+ +..+++|+.|++++|.+..+.+ +..+++|+.|+|++|.+..++
T Consensus 139 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~- 211 (308)
T 1h6u_A 139 NQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS- 211 (308)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG-
T ss_pred CccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc-
Confidence 99999876 8889999999999999998865 8899999999999999999854 788999999999999999987
Q ss_pred ccccccccccEEEccCCcCcc
Q psy1672 189 RSVEPLLKLMMIELHDNPWVC 209 (600)
Q Consensus 189 ~~~~~l~~L~~L~l~~N~~~C 209 (600)
.+..+++|+.|++.+|++.+
T Consensus 212 -~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 212 -PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -GGTTCTTCCEEEEEEEEEEC
T ss_pred -cccCCCCCCEEEccCCeeec
Confidence 37889999999999999764
No 69
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.67 E-value=5.2e-17 Score=167.02 Aligned_cols=174 Identities=19% Similarity=0.236 Sum_probs=139.4
Q ss_pred EEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCC
Q psy1672 31 WMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL 110 (600)
Q Consensus 31 ~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~ 110 (600)
.++..+..++.++.. ..+++|++++|.++.++.. .+.+|+.|++++|.++.+.+..|..+++|++|+|++|.
T Consensus 84 ~L~Ls~n~l~~l~~~---~~L~~L~l~~n~l~~~~~~-----~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (317)
T 3o53_A 84 TLDLNNNYVQELLVG---PSIETLHAANNNISRVSCS-----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (317)
T ss_dssp EEECCSSEEEEEEEC---TTCCEEECCSSCCSEEEEC-----CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSC
T ss_pred EEECcCCccccccCC---CCcCEEECCCCccCCcCcc-----ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCC
Confidence 344444445544432 2266666666666665543 35789999999999999988889999999999999999
Q ss_pred CCCCCcccc-CCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcc
Q psy1672 111 LTSIPSLTF-QSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189 (600)
Q Consensus 111 l~~l~~~~f-~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 189 (600)
++.++...+ ..+++|++|+|++|.++.+... ..+++|+.|+|++|+++.+++. +..+++|+.|+|++|.++.++.
T Consensus 156 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~~l~~- 231 (317)
T 3o53_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ--VVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLIEK- 231 (317)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEEECC--CCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEECT-
T ss_pred CCcccHHHHhhccCcCCEEECCCCcCcccccc--cccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCcccchhh-
Confidence 998766555 4689999999999999988443 3589999999999999999765 8889999999999999999875
Q ss_pred cccccccccEEEccCCcCccccccccc
Q psy1672 190 SVEPLLKLMMIELHDNPWVCDCNMRSI 216 (600)
Q Consensus 190 ~~~~l~~L~~L~l~~N~~~C~C~l~~l 216 (600)
.+..+++|+.|++.+|++.|+|-..++
T Consensus 232 ~~~~l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 232 ALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp TCCCCTTCCEEECTTCCCBHHHHHHHH
T ss_pred HhhcCCCCCEEEccCCCccCcCHHHHH
Confidence 578889999999999999998755444
No 70
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=2.4e-16 Score=157.68 Aligned_cols=163 Identities=22% Similarity=0.316 Sum_probs=139.5
Q ss_pred EccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCC
Q psy1672 33 ECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112 (600)
Q Consensus 33 ~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~ 112 (600)
++.+..++.++.......+++|++++|.|+.++ .+. .+.+|+.|+|++|.++.+++ |..+++|++|+|++|.|+
T Consensus 25 ~l~~~~i~~~~~~~~l~~L~~L~l~~n~i~~l~--~l~--~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~ 98 (263)
T 1xeu_A 25 NLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLA--GMQ--FFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLK 98 (263)
T ss_dssp HHTCSCTTSEECHHHHTTCSEEECTTSCCCCCT--TGG--GCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCS
T ss_pred HhcCCCcccccchhhcCcCcEEECcCCCcccch--HHh--hCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccC
Confidence 345566666664333344999999999999988 343 69999999999999999976 899999999999999999
Q ss_pred CCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCccccc
Q psy1672 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192 (600)
Q Consensus 113 ~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 192 (600)
.++... . ++|+.|+|++|.++.+. .+..+++|+.|+|++|+|+.+. .+..+++|+.|+|++|.+..+ ..+.
T Consensus 99 ~l~~~~--~-~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i~~~--~~l~ 169 (263)
T 1xeu_A 99 NLNGIP--S-ACLSRLFLDNNELRDTD--SLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT--GGLT 169 (263)
T ss_dssp CCTTCC--C-SSCCEEECCSSCCSBSG--GGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCCCBC--TTST
T ss_pred CcCccc--c-CcccEEEccCCccCCCh--hhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcCcch--HHhc
Confidence 988633 3 88999999999999874 4889999999999999999983 688999999999999999998 5688
Q ss_pred ccccccEEEccCCcCccc
Q psy1672 193 PLLKLMMIELHDNPWVCD 210 (600)
Q Consensus 193 ~l~~L~~L~l~~N~~~C~ 210 (600)
.+++|+.|++.+|++.+.
T Consensus 170 ~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 170 RLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TCCCCCEEEEEEEEEECC
T ss_pred cCCCCCEEeCCCCcccCC
Confidence 899999999999997654
No 71
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.66 E-value=4.2e-16 Score=167.68 Aligned_cols=153 Identities=25% Similarity=0.288 Sum_probs=140.8
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
.+.++.+++.|+.+|...+ .+|+.|+|++|+|+.+.+..|.++++|++|+|++|.|+.++...|..+++|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~-----~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS-----TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC-----TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCEEEeCCCCcCcCCCCCC-----CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 5678999999999998654 58999999999999999999999999999999999999999989999999999999
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCC-CcCCCCCcccccccccccEEEccCCcCc
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNG-NRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~-N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
++|.++.+.+..|..+++|+.|+|++|.|..+.+..|..+++|+.|+|++ |.+..++...|..+++|+.|++.+|.+.
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 99999999988999999999999999999999988999999999999998 6777788778888899999999988765
No 72
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.66 E-value=6.1e-16 Score=159.87 Aligned_cols=152 Identities=20% Similarity=0.310 Sum_probs=132.0
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
++.|+|++|.|+.+|..++ .+.+|++|+|++|.+..++ ..|..+++|++|+|++|.|+.++. .|..+++|++|+|
T Consensus 83 l~~L~L~~n~l~~lp~~l~---~l~~L~~L~L~~n~l~~lp-~~~~~l~~L~~L~Ls~n~l~~lp~-~l~~l~~L~~L~L 157 (328)
T 4fcg_A 83 RVALELRSVPLPQFPDQAF---RLSHLQHMTIDAAGLMELP-DTMQQFAGLETLTLARNPLRALPA-SIASLNRLRELSI 157 (328)
T ss_dssp CCEEEEESSCCSSCCSCGG---GGTTCSEEEEESSCCCCCC-SCGGGGTTCSEEEEESCCCCCCCG-GGGGCTTCCEEEE
T ss_pred eeEEEccCCCchhcChhhh---hCCCCCEEECCCCCccchh-HHHhccCCCCEEECCCCccccCcH-HHhcCcCCCEEEC
Confidence 8999999999999998877 5999999999999999774 568999999999999999998876 6888999999999
Q ss_pred cCCCCCccCcccc---------cCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEE
Q psy1672 131 ARNPISKIEKGAF---------QFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIE 201 (600)
Q Consensus 131 s~N~i~~l~~~~~---------~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 201 (600)
++|.+....+..+ ..+++|+.|+|++|.++.++ ..+..+++|+.|+|++|.+..++. .+..+++|+.|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp-~~l~~l~~L~~L~L~~N~l~~l~~-~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLP-ASIANLQNLKSLKIRNSPLSALGP-AIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCC-GGGGGCTTCCEEEEESSCCCCCCG-GGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcch-HhhcCCCCCCEEEccCCCCCcCch-hhccCCCCCEEE
Confidence 9976555444444 34899999999999999774 568899999999999999999875 588899999999
Q ss_pred ccCCcCcc
Q psy1672 202 LHDNPWVC 209 (600)
Q Consensus 202 l~~N~~~C 209 (600)
+.+|.+..
T Consensus 236 Ls~n~~~~ 243 (328)
T 4fcg_A 236 LRGCTALR 243 (328)
T ss_dssp CTTCTTCC
T ss_pred CcCCcchh
Confidence 99987643
No 73
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.65 E-value=4.7e-16 Score=167.83 Aligned_cols=153 Identities=23% Similarity=0.270 Sum_probs=142.5
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
...++.+++.++.+|.... .+|+.|+|++|+|+.+.+..|.++++|++|+|++|.|+.+++..|..+++|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~-----~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP-----SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC-----TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CcEEEECCCCcCccCCCCC-----CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 5678999999999997653 68999999999999999999999999999999999999999889999999999999
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCC-CcCCCCCcccccccccccEEEccCCcCc
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNG-NRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~-N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
++|.++.+++..|..+++|+.|+|++|.|..+++..|..+++|+.|+|++ |.+..++...|..+.+|+.|++++|.+.
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 99999999999999999999999999999999998999999999999998 6788888888999999999999999865
No 74
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.65 E-value=2.2e-16 Score=161.98 Aligned_cols=195 Identities=15% Similarity=0.154 Sum_probs=115.9
Q ss_pred cCCCCCCC---CeecccCC--------------ceEEEccCCCCCcc---------CCCCCCCCceEEEeeCCCCCC--C
Q psy1672 13 SVSSCPST---CICKWKGG--------------KQWMECRDKFLITI---------PEAPESELTQVLDMSGNNLQI--L 64 (600)
Q Consensus 13 ~~~~Cp~~---C~C~~~~~--------------~~~v~C~~~~L~~i---------p~~~~~~~l~~L~Ls~n~L~~--l 64 (600)
+..+|+.. |.|..... ...+.|...+|+.+ |..++.. ++.|+|++|.+.. +
T Consensus 2 ~~~~C~~~~~~c~c~~~~~~~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l~~p~~~~~~-L~~L~L~~n~l~~~~~ 80 (312)
T 1wwl_A 2 DPEPCELDEESCSCNFSDPKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDI-IKSLSLKRLTVRAARI 80 (312)
T ss_dssp ---CCCEETTEECCBCCSSSCCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTTCCCHHHHHH-HHHCCCCEEEEEEEEC
T ss_pred CCcccccccccccccccccccchHHHhhhhccccEEEEccCCCceeEeecccccccHHHHHHH-HhhcccccccccCCCc
Confidence 34578744 88875541 12456665556655 6544443 6667777776643 3
Q ss_pred Chhhh----cccCCCCccEEEeecccCcccCcccc--CCCCCccEEEccCCCCCCCCccccCCC-----CCCCEEEccCC
Q psy1672 65 PKEAF----RRAGLLNLQKLFLARCHIGQIDSGAL--DGLTNLIEIDLSDNLLTSIPSLTFQSV-----RFLRDLNLARN 133 (600)
Q Consensus 65 ~~~~f----~~~~l~~L~~L~L~~n~l~~i~~~~f--~~l~~L~~L~Ls~N~l~~l~~~~f~~l-----~~L~~L~Ls~N 133 (600)
+...+ ...++.+|++|+|++|+++...+..+ ..+++|++|+|++|.|+.++ ..|..+ ++|++|+|++|
T Consensus 81 ~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~~~~~~L~~L~L~~N 159 (312)
T 1wwl_A 81 PSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRD-AWLAELQQWLKPGLKVLSIAQA 159 (312)
T ss_dssp BHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSS-SHHHHHHTTCCTTCCEEEEESC
T ss_pred CHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchh-HHHHHHHHhhcCCCcEEEeeCC
Confidence 33322 01136677777777777765434433 66777777777777777663 345444 66777777777
Q ss_pred CCCccCcccccCCCCcceeeCCCCcCcccC--hhh--hcCCCCCCEEEcCCCcCCCCC---cccccccccccEEEccCCc
Q psy1672 134 PISKIEKGAFQFVPGLVKLDMSESRLEHIS--PEA--FTGAKSLESIKLNGNRLSHFP---VRSVEPLLKLMMIELHDNP 206 (600)
Q Consensus 134 ~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~--~~~--~~~l~~L~~L~Ls~N~l~~l~---~~~~~~l~~L~~L~l~~N~ 206 (600)
.++.+.+..|..+++|+.|+|++|++.... +.. +..+++|+.|+|++|.++.++ ...+..+++|+.|++++|.
T Consensus 160 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 160 HSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239 (312)
T ss_dssp SCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSC
T ss_pred CCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCc
Confidence 777776666777777777777777754421 112 256677777777777776432 2333455677777777776
Q ss_pred Ccc
Q psy1672 207 WVC 209 (600)
Q Consensus 207 ~~C 209 (600)
+.-
T Consensus 240 l~~ 242 (312)
T 1wwl_A 240 LRD 242 (312)
T ss_dssp CCS
T ss_pred CCc
Confidence 543
No 75
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.64 E-value=1.2e-15 Score=142.80 Aligned_cols=119 Identities=29% Similarity=0.502 Sum_probs=100.7
Q ss_pred cEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCC
Q psy1672 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181 (600)
Q Consensus 102 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N 181 (600)
+.+++++|.|+.+|...+ .+|+.|+|++|.|+.+.+..|..+++|+.|+|++|+|+.+++..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSSCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 577888888887776432 56888888888888887777888888888888888888888777888899999999999
Q ss_pred cCCCCCcccccccccccEEEccCCcCccccc-cccchhhhccc
Q psy1672 182 RLSHFPVRSVEPLLKLMMIELHDNPWVCDCN-MRSIKMWLADK 223 (600)
Q Consensus 182 ~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~-l~~l~~w~~~~ 223 (600)
+|+.++...|..+++|+.|++.+|+|.|+|. +.++..|+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~~~l~~~~~~~ 134 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLRNWVADH 134 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGGHHHHHHHHHC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccccHHHHHHHHHhc
Confidence 9999988778899999999999999999996 88899998743
No 76
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.63 E-value=8.3e-16 Score=168.72 Aligned_cols=155 Identities=21% Similarity=0.220 Sum_probs=136.6
Q ss_pred eEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCC
Q psy1672 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N 109 (600)
+.++|.+.+++.+|..++.. +++|+|++|.++.+++..|. ++.+|++|+|++|+++.+.+.+|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~~ip~~~~~~-L~~L~Ls~n~i~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIHVPKDLSQK-TTILNISQNYISELWTSDIL--SLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSSCCCSCCTT-CSEEECCSSCCCCCCHHHHT--TCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccccccccccc-ccEEECCCCcccccChhhcc--ccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999999999988755 99999999999999988887 8999999999999999998889999999999999999
Q ss_pred CCCCCCccccCCCCCCCEEEccCCCCCccC-cccccCCCCcceeeCCCCcCcccChhhhcCCCCC--CEEEcCCCcC--C
Q psy1672 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIE-KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL--ESIKLNGNRL--S 184 (600)
Q Consensus 110 ~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~-~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L--~~L~Ls~N~l--~ 184 (600)
.|+.++.. .+++|++|+|++|.++.+. +..|..+++|+.|++++|.+.. ..+..+.+| +.|++++|.+ .
T Consensus 80 ~l~~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLVKISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCCEEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ceeecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 99998875 7899999999999999863 5789999999999999999986 356677788 9999999998 4
Q ss_pred CCCcccccc
Q psy1672 185 HFPVRSVEP 193 (600)
Q Consensus 185 ~l~~~~~~~ 193 (600)
...+..+..
T Consensus 154 ~~~~~~l~~ 162 (520)
T 2z7x_B 154 KEDPEGLQD 162 (520)
T ss_dssp SCCTTTTTT
T ss_pred ccccccccc
Confidence 444444444
No 77
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.63 E-value=4.8e-16 Score=159.39 Aligned_cols=175 Identities=19% Similarity=0.121 Sum_probs=134.5
Q ss_pred ceEEEccCCCCC-ccCCCC---CCCCceEEEeeCCCCCCCChhhhcccCC-----CCccEEEeecccCcccCccccCCCC
Q psy1672 29 KQWMECRDKFLI-TIPEAP---ESELTQVLDMSGNNLQILPKEAFRRAGL-----LNLQKLFLARCHIGQIDSGALDGLT 99 (600)
Q Consensus 29 ~~~v~C~~~~L~-~ip~~~---~~~~l~~L~Ls~n~L~~l~~~~f~~~~l-----~~L~~L~L~~n~l~~i~~~~f~~l~ 99 (600)
-+.++..+..++ .+|..+ ....+++|+|++|.++.++. .+. .+ ++|++|+|++|++..+.+..|..++
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~--~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDA-WLA--ELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSS-HHH--HHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhH-HHH--HHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 345666666776 466543 23449999999999998854 333 34 8999999999999999888899999
Q ss_pred CccEEEccCCCCCCC---C-ccccCCCCCCCEEEccCCCCCcc---CcccccCCCCcceeeCCCCcCcccCh-hhhcCCC
Q psy1672 100 NLIEIDLSDNLLTSI---P-SLTFQSVRFLRDLNLARNPISKI---EKGAFQFVPGLVKLDMSESRLEHISP-EAFTGAK 171 (600)
Q Consensus 100 ~L~~L~Ls~N~l~~l---~-~~~f~~l~~L~~L~Ls~N~i~~l---~~~~~~~l~~L~~L~Ls~n~l~~i~~-~~~~~l~ 171 (600)
+|++|+|++|.+... + ...|..+++|++|+|++|.++.+ ....+..+++|+.|+|++|++....+ ..+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 999999999987642 2 22347788999999999998843 33455678899999999999988653 4566688
Q ss_pred CCCEEEcCCCcCCCCCcccccccccccEEEccCCcCcc
Q psy1672 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVC 209 (600)
Q Consensus 172 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C 209 (600)
+|+.|+|++|.|+.++...+ ++|+.|++++|.+.-
T Consensus 254 ~L~~L~Ls~N~l~~ip~~~~---~~L~~L~Ls~N~l~~ 288 (312)
T 1wwl_A 254 QLNSLNLSFTGLKQVPKGLP---AKLSVLDLSYNRLDR 288 (312)
T ss_dssp TCCEEECTTSCCSSCCSSCC---SEEEEEECCSSCCCS
T ss_pred CCCEEECCCCccChhhhhcc---CCceEEECCCCCCCC
Confidence 99999999999998875443 688899999988653
No 78
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=2.9e-16 Score=171.22 Aligned_cols=155 Identities=21% Similarity=0.254 Sum_probs=126.2
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccC-CCCCCCEEE
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQ-SVRFLRDLN 129 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~-~l~~L~~L~ 129 (600)
+++|++++|.|..++.. .+++|+.|+|++|.++.+.+..|..+++|++|+|++|.|+.+.+..|. .+++|+.|+
T Consensus 101 L~~L~L~~N~l~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 101 IETLHAANNNISRVSCS-----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp CCEEECCSSCCCCEEEC-----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred cCEEECcCCcCCCCCcc-----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 55555555555555433 357899999999999988888888999999999999999987665664 688999999
Q ss_pred ccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCcc
Q psy1672 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVC 209 (600)
Q Consensus 130 Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C 209 (600)
|++|.++.++. +..+++|+.|+|++|.|+.+++. +..+++|+.|+|++|.|..++. .+..+++|+.|++.+|++.|
T Consensus 176 Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 176 LQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLIEK-ALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp CTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEECT-TCCCCTTCCEEECTTCCBCH
T ss_pred cCCCccccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcccch-hhccCCCCCEEEcCCCCCcC
Confidence 99999988844 34588999999999999998765 7889999999999999998875 47778899999999999998
Q ss_pred ccccc
Q psy1672 210 DCNMR 214 (600)
Q Consensus 210 ~C~l~ 214 (600)
+|-..
T Consensus 252 ~~~~~ 256 (487)
T 3oja_A 252 GTLRD 256 (487)
T ss_dssp HHHHH
T ss_pred cchHH
Confidence 76543
No 79
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.63 E-value=2.2e-15 Score=151.42 Aligned_cols=152 Identities=22% Similarity=0.265 Sum_probs=139.0
Q ss_pred eEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEcc
Q psy1672 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131 (600)
Q Consensus 52 ~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls 131 (600)
..++..+..+..+|... ..+|+.|+|++|+++.+.+..|.++++|++|+|++|.++.++...|..+++|++|+|+
T Consensus 10 ~~~~c~~~~l~~ip~~l-----~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 84 (276)
T 2z62_A 10 ITYQCMELNFYKIPDNL-----PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (276)
T ss_dssp TEEECTTSCCSSCCSSS-----CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred ceEEecCCCccccCCCC-----CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECC
Confidence 35677888899998754 3589999999999999998889999999999999999999998889999999999999
Q ss_pred CCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCC-cccccccccccEEEccCCcCc
Q psy1672 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 132 ~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~-~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|.++.+.+..|..+++|+.|++++|.+..+.+..+..+++|+.|+|++|.+..+. +..+..+++|+.|++.+|.+.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 99999998888999999999999999999998878999999999999999999865 567889999999999999865
No 80
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.63 E-value=1.4e-15 Score=169.59 Aligned_cols=165 Identities=22% Similarity=0.326 Sum_probs=136.0
Q ss_pred eEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCC
Q psy1672 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N 109 (600)
+.+++.+..+..++.......|+.|+|++|.|..++. +. .+.+|+.|+|++|.|..++ .|..+++|++|+|++|
T Consensus 46 ~~L~l~~n~i~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~--~l~~L~~L~Ls~N~l~~l~--~l~~l~~L~~L~Ls~N 119 (605)
T 1m9s_A 46 DQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LT--NLKNLGWLFLDENKIKDLS--SLKDLKKLKSLSLEHN 119 (605)
T ss_dssp CCCBCTTCCCCCCTTGGGCTTCCEEECTTSCCCCCGG--GG--GCTTCCEEECCSSCCCCCT--TSTTCTTCCEEECTTS
T ss_pred CEEECcCCCCCCChHHccCCCCCEEEeeCCCCCCChh--hc--cCCCCCEEECcCCCCCCCh--hhccCCCCCEEEecCC
Confidence 4567777778777765444558999999999988876 43 7889999999999988875 4888999999999999
Q ss_pred CCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcc
Q psy1672 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189 (600)
Q Consensus 110 ~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 189 (600)
.|+.++ .+..+++|+.|+|++|.++.+ ..|..+++|+.|+|++|.|..+.+ +..+++|+.|+|++|.|..++
T Consensus 120 ~l~~l~--~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~-- 191 (605)
T 1m9s_A 120 GISDIN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR-- 191 (605)
T ss_dssp CCCCCG--GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG--
T ss_pred CCCCCc--cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCCh--
Confidence 998874 377888999999999998887 467888999999999999988865 788899999999999998874
Q ss_pred cccccccccEEEccCCcCc
Q psy1672 190 SVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 190 ~~~~l~~L~~L~l~~N~~~ 208 (600)
.+..+++|+.|+|.+|++.
T Consensus 192 ~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 192 ALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp GGTTCTTCSEEECCSEEEE
T ss_pred HHccCCCCCEEEccCCcCc
Confidence 5778889999999988754
No 81
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.61 E-value=3e-15 Score=162.48 Aligned_cols=153 Identities=21% Similarity=0.312 Sum_probs=142.6
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
.+.++.+++.++.+|... ..+|+.|+|++|+|+.+.+..|.++++|++|+|++|.|+.+.+..|..+++|++|+|
T Consensus 13 ~~~v~c~~~~l~~ip~~~-----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 87 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGI-----PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGL 87 (477)
T ss_dssp TTEEECCSCCCSSCCSCC-----CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCEEEeCCCCcCcCCCCC-----CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEEC
Confidence 357899999999999765 358999999999999999999999999999999999999998889999999999999
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
++|.++.++...|.++++|+.|+|++|.+..+.+..|..+++|+.|+|++|.+..+....|..+++|+.|++.+|.+.
T Consensus 88 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 88 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp CSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 999999998888999999999999999999998999999999999999999999998888999999999999999765
No 82
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.60 E-value=2e-15 Score=157.33 Aligned_cols=152 Identities=18% Similarity=0.249 Sum_probs=139.6
Q ss_pred eEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEcc
Q psy1672 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131 (600)
Q Consensus 52 ~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls 131 (600)
...+++++.++.+|...+ .+|+.|+|++|+++.+++..|.++++|++|+|++|.|+.+++..|..+++|++|+|+
T Consensus 34 ~~c~~~~~~l~~iP~~~~-----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 34 GICKGSSGSLNSIPSGLT-----EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp SEEECCSTTCSSCCTTCC-----TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred eEeeCCCCCccccccccc-----ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 347889999999998654 489999999999999998889999999999999999999988889999999999999
Q ss_pred CCCCCccCcccccCCCCcceeeCCCCcCcccCh-hhhcCCCCCCEEEcCCC-cCCCCCcccccccccccEEEccCCcCc
Q psy1672 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISP-EAFTGAKSLESIKLNGN-RLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 132 ~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~-~~~~~l~~L~~L~Ls~N-~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|.++.++...|..+++|+.|+|++|++..++. ..+..+++|+.|++++| .+..++...|..+++|+.|++.+|.+.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 999999988889999999999999999999977 67899999999999999 588888888899999999999999764
No 83
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.60 E-value=1e-14 Score=164.28 Aligned_cols=153 Identities=22% Similarity=0.281 Sum_probs=83.8
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCC-------CccEEEccCCCCCCCCcccc-CCC
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT-------NLIEIDLSDNLLTSIPSLTF-QSV 122 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~-------~L~~L~Ls~N~l~~l~~~~f-~~l 122 (600)
+++|+|++|.|+.++...|. .+++|+.|+|++|.++.++...|..+. +|++|+|++|.|+.++...+ ..+
T Consensus 435 L~~L~Ls~N~l~~lp~~~~~--~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l 512 (636)
T 4eco_A 435 VSSINLSNNQISKFPKELFS--TGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTL 512 (636)
T ss_dssp EEEEECCSSCCCSCCTHHHH--TTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGGGSTTTC
T ss_pred CCEEECcCCccCcCCHHHHc--cCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCccChhhhhccC
Confidence 55555555555555555554 455666666666665555544444332 56666666666665554322 255
Q ss_pred CCCCEEEccCCCCCccCcccccCCCCcceeeC------CCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCccccccccc
Q psy1672 123 RFLRDLNLARNPISKIEKGAFQFVPGLVKLDM------SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196 (600)
Q Consensus 123 ~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~L------s~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~ 196 (600)
++|+.|+|++|.++.+ +..+..+++|+.|+| ++|++....+..+..+++|+.|+|++|.+..++...+ ++
T Consensus 513 ~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~~~---~~ 588 (636)
T 4eco_A 513 PYLVGIDLSYNSFSKF-PTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKIT---PN 588 (636)
T ss_dssp TTCCEEECCSSCCSSC-CCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCCC---TT
T ss_pred CCcCEEECCCCCCCCc-ChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCccCHhHh---Cc
Confidence 5666666666666554 333445566666665 2344444445555556666666666666655554322 45
Q ss_pred ccEEEccCCcCcc
Q psy1672 197 LMMIELHDNPWVC 209 (600)
Q Consensus 197 L~~L~l~~N~~~C 209 (600)
|+.|++++|++.|
T Consensus 589 L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 589 ISVLDIKDNPNIS 601 (636)
T ss_dssp CCEEECCSCTTCE
T ss_pred CCEEECcCCCCcc
Confidence 5666666666554
No 84
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.60 E-value=6.6e-15 Score=152.76 Aligned_cols=169 Identities=18% Similarity=0.242 Sum_probs=135.9
Q ss_pred eEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCC
Q psy1672 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N 109 (600)
+.++..+..+..++.......++.|++++|.+..++. +. .+.+|+.|++++|.+..+.+ +..+++|++|+|++|
T Consensus 158 ~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~--~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 158 NYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LA--SLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231 (347)
T ss_dssp CEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG--GG--GCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred cEEEecCCCcCCchhhccCCCCCEEEccCCccccccc--cc--CCCccceeecccCCCCCCch--hhcCCcCCEEEccCC
Confidence 4667777777776654334458999999999988776 33 68889999999988887755 778888999999999
Q ss_pred CCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcc
Q psy1672 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189 (600)
Q Consensus 110 ~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 189 (600)
.++.++. +..+++|++|++++|.++.+ ..+..+++|+.|++++|.+..+ ..+..+++|+.|++++|.+......
T Consensus 232 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 232 KITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred ccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh
Confidence 8888776 77888899999998888876 3577888888999988888887 4577888889999998888888777
Q ss_pred cccccccccEEEccCCcCccc
Q psy1672 190 SVEPLLKLMMIELHDNPWVCD 210 (600)
Q Consensus 190 ~~~~l~~L~~L~l~~N~~~C~ 210 (600)
.+..+++|+.|++.+|++...
T Consensus 306 ~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 306 VIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp HHHTCTTCSEEECCSSSCCCC
T ss_pred HhhccccCCEEEccCCccccc
Confidence 788888888888888887654
No 85
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.60 E-value=2.4e-15 Score=154.24 Aligned_cols=191 Identities=19% Similarity=0.212 Sum_probs=158.5
Q ss_pred CCCC---CCCeeccc---CCceEEEccCCCCC---ccCCCCC-CCCceEEEeeC-CCCCCCChhhhcccCCCCccEEEee
Q psy1672 15 SSCP---STCICKWK---GGKQWMECRDKFLI---TIPEAPE-SELTQVLDMSG-NNLQILPKEAFRRAGLLNLQKLFLA 83 (600)
Q Consensus 15 ~~Cp---~~C~C~~~---~~~~~v~C~~~~L~---~ip~~~~-~~~l~~L~Ls~-n~L~~l~~~~f~~~~l~~L~~L~L~ 83 (600)
..|- ..-.|... +....++..+..+. .+|..+. ...+++|+|++ |.+....+..|. .+++|++|+|+
T Consensus 32 ~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~--~l~~L~~L~Ls 109 (313)
T 1ogq_A 32 DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIA--KLTQLHYLYIT 109 (313)
T ss_dssp CTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGG--GCTTCSEEEEE
T ss_pred CCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHh--cCCCCCEEECc
Confidence 3564 45566543 34567888888887 4665433 24499999995 888743334454 79999999999
Q ss_pred cccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCC-CcceeeCCCCcCccc
Q psy1672 84 RCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP-GLVKLDMSESRLEHI 162 (600)
Q Consensus 84 ~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~-~L~~L~Ls~n~l~~i 162 (600)
+|.++...+..|..+++|++|+|++|.|+...+..|..+++|++|+|++|.++...+..|..+. +|+.|++++|++...
T Consensus 110 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~ 189 (313)
T 1ogq_A 110 HTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189 (313)
T ss_dssp EECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEE
T ss_pred CCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeecc
Confidence 9999977777899999999999999999966666899999999999999999966677788887 999999999999987
Q ss_pred ChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 163 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
.+..+..+. |+.|+|++|.+....+..|..+++|+.|++.+|.+.
T Consensus 190 ~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 234 (313)
T 1ogq_A 190 IPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234 (313)
T ss_dssp CCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC
T ss_pred CChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCcee
Confidence 788888887 999999999999888888999999999999999865
No 86
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.59 E-value=9.4e-15 Score=148.29 Aligned_cols=145 Identities=23% Similarity=0.354 Sum_probs=131.9
Q ss_pred CceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEE
Q psy1672 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLN 129 (600)
Q Consensus 50 ~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 129 (600)
.++.|++++|.+..++. +. .+.+|+.|+|++|+++.+.+ +..+++|++|+|++|.++.++. +..+++|++|+
T Consensus 47 ~L~~L~l~~~~i~~~~~--~~--~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~ 118 (291)
T 1h6t_A 47 SIDQIIANNSDIKSVQG--IQ--YLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLS 118 (291)
T ss_dssp TCCEEECTTSCCCCCTT--GG--GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEE
T ss_pred cccEEEccCCCcccChh--Hh--cCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChh--hccCCCCCEEE
Confidence 38999999999999864 43 69999999999999999876 8999999999999999999765 88999999999
Q ss_pred ccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 130 Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
|++|.++.+ ..+..+++|+.|++++|++..+ ..+..+++|+.|+|++|.+..++. +..+++|+.|++++|.+.
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 999999987 4578899999999999999998 578899999999999999999875 888999999999999865
No 87
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=3.8e-15 Score=138.07 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=109.6
Q ss_pred ceEEEeeCCCCC--CCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEE
Q psy1672 51 TQVLDMSGNNLQ--ILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDL 128 (600)
Q Consensus 51 l~~L~Ls~n~L~--~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L 128 (600)
+++|++++|.++ .++.. +. .+++|+.|+|++|.++.+ ..|..+++|++|+|++|.++...+..+..+++|++|
T Consensus 26 L~~L~l~~n~l~~~~i~~~-~~--~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGL-TA--EFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp CSEEECCSCBCBTTBCSSC-CG--GGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred CCEEECCCCCCChhhHHHH-HH--hCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 899999999988 77655 33 688999999999988888 568888999999999999988555567678889999
Q ss_pred EccCCCCCccCc-ccccCCCCcceeeCCCCcCcccCh---hhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 129 NLARNPISKIEK-GAFQFVPGLVKLDMSESRLEHISP---EAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 129 ~Ls~N~i~~l~~-~~~~~l~~L~~L~Ls~n~l~~i~~---~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
+|++|.++.++. ..|..+++|+.|++++|.+..+++ ..+..+++|+.|++++|.+..++.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 999998888753 567888889999999998888866 578888889999988888877764
No 88
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.58 E-value=2e-14 Score=158.86 Aligned_cols=153 Identities=21% Similarity=0.326 Sum_probs=118.0
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-..+++.+.+++.+|..+... ++.|+|++|.|+.|| . .+.+|+.|+|++|.|+.++. |.. +|++|+|++
T Consensus 61 L~~L~Ls~n~L~~lp~~l~~~-L~~L~Ls~N~l~~ip-~-----~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 61 FSELQLNRLNLSSLPDNLPPQ-ITVLEITQNALISLP-E-----LPASLEYLDACDNRLSTLPE--LPA--SLKHLDVDN 129 (571)
T ss_dssp CSEEECCSSCCSCCCSCCCTT-CSEEECCSSCCSCCC-C-----CCTTCCEEECCSSCCSCCCC--CCT--TCCEEECCS
T ss_pred ccEEEeCCCCCCccCHhHcCC-CCEEECcCCCCcccc-c-----ccCCCCEEEccCCCCCCcch--hhc--CCCEEECCC
Confidence 578999999999999877655 999999999999988 2 47899999999999988765 554 888888988
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.|+.++. .+++|+.|+|++|.|+.++. .+++|+.|+|++|.|+.++. |. ++|+.|+|++|.|+.++.
T Consensus 130 N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~~lp~ 197 (571)
T 3cvr_A 130 NQLTMLPE----LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLESLPA 197 (571)
T ss_dssp SCCSCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCSSCCC
T ss_pred CcCCCCCC----cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCCchhh
Confidence 88888776 46778888888888887654 45778888888888877654 44 777777777777777765
Q ss_pred ccccccccc-------cEEEccCCcCc
Q psy1672 189 RSVEPLLKL-------MMIELHDNPWV 208 (600)
Q Consensus 189 ~~~~~l~~L-------~~L~l~~N~~~ 208 (600)
+.. +| +.|++.+|.+.
T Consensus 198 --~~~--~L~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 198 --VPV--RNHHSEETEIFFRCRENRIT 220 (571)
T ss_dssp --CC----------CCEEEECCSSCCC
T ss_pred --HHH--hhhcccccceEEecCCCcce
Confidence 332 55 77777777655
No 89
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.57 E-value=2.2e-14 Score=158.39 Aligned_cols=156 Identities=24% Similarity=0.293 Sum_probs=124.7
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.++..++.++.+| ..... +++|+|++|.|+.||. +. . +|+.|+|++|.|+.++. .+++|++|+|++
T Consensus 82 L~~L~Ls~N~l~~ip-~~l~~-L~~L~Ls~N~l~~ip~--l~--~--~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~ 149 (571)
T 3cvr_A 82 ITVLEITQNALISLP-ELPAS-LEYLDACDNRLSTLPE--LP--A--SLKHLDVDNNQLTMLPE----LPALLEYINADN 149 (571)
T ss_dssp CSEEECCSSCCSCCC-CCCTT-CCEEECCSSCCSCCCC--CC--T--TCCEEECCSSCCSCCCC----CCTTCCEEECCS
T ss_pred CCEEECcCCCCcccc-cccCC-CCEEEccCCCCCCcch--hh--c--CCCEEECCCCcCCCCCC----cCccccEEeCCC
Confidence 467888888888888 44333 8999999999998887 42 2 89999999999988765 578899999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCC-------CEEEcCCC
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL-------ESIKLNGN 181 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L-------~~L~Ls~N 181 (600)
|.|+.++. .+++|+.|+|++|.|+.++. |. ++|+.|+|++|+|+.++. |.. +| +.|+|++|
T Consensus 150 N~l~~lp~----~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~~lp~--~~~--~L~~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 150 NQLTMLPE----LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLESLPA--VPV--RNHHSEETEIFFRCREN 217 (571)
T ss_dssp SCCSCCCC----CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCSSCCC--CC----------CCEEEECCSS
T ss_pred CccCcCCC----cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCCchhh--HHH--hhhcccccceEEecCCC
Confidence 99998876 46789999999999988765 54 889999999999988865 443 66 89999999
Q ss_pred cCCCCCcccccccccccEEEccCCcCcc
Q psy1672 182 RLSHFPVRSVEPLLKLMMIELHDNPWVC 209 (600)
Q Consensus 182 ~l~~l~~~~~~~l~~L~~L~l~~N~~~C 209 (600)
.|+.++... ..+++|+.|++.+|++.+
T Consensus 218 ~l~~lp~~l-~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 218 RITHIPENI-LSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CCCCCCGGG-GGSCTTEEEECCSSSCCH
T ss_pred cceecCHHH-hcCCCCCEEEeeCCcCCC
Confidence 999888644 448899999999998765
No 90
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.57 E-value=3e-15 Score=153.27 Aligned_cols=174 Identities=17% Similarity=0.126 Sum_probs=134.2
Q ss_pred eEEEccCCCCCcc-CCCC---CCCCceEEEeeCCCCCCCCh----hhhcccCCCCccEEEeecccCcccCccccCCCCCc
Q psy1672 30 QWMECRDKFLITI-PEAP---ESELTQVLDMSGNNLQILPK----EAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNL 101 (600)
Q Consensus 30 ~~v~C~~~~L~~i-p~~~---~~~~l~~L~Ls~n~L~~l~~----~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L 101 (600)
+.++..+..+... |..+ ....+++|+|++|.+..... ..+. .+++|++|+|++|.+..+.+..|..+++|
T Consensus 94 ~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~--~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 94 KELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW--LKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT--BCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred eEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh--hccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 3455556666543 3332 23349999999999985322 2232 68999999999999999998889999999
Q ss_pred cEEEccCCCCCC---CC-ccccCCCCCCCEEEccCCCCCccCcc---cccCCCCcceeeCCCCcCcccChhhhcCC---C
Q psy1672 102 IEIDLSDNLLTS---IP-SLTFQSVRFLRDLNLARNPISKIEKG---AFQFVPGLVKLDMSESRLEHISPEAFTGA---K 171 (600)
Q Consensus 102 ~~L~Ls~N~l~~---l~-~~~f~~l~~L~~L~Ls~N~i~~l~~~---~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l---~ 171 (600)
++|+|++|.+.. ++ ...+..+++|++|+|++|.++.+... .+..+++|+.|+|++|+|..+.+..+..+ +
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 999999999764 32 22346788999999999999866432 35678999999999999999866666665 6
Q ss_pred CCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 172 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|+.|+|++|+|+.++...+ ++|+.|++++|.+.
T Consensus 252 ~L~~L~Ls~N~l~~lp~~~~---~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 252 ALNSLNLSFAGLEQVPKGLP---AKLRVLDLSSNRLN 285 (310)
T ss_dssp TCCCEECCSSCCCSCCSCCC---SCCSCEECCSCCCC
T ss_pred cCCEEECCCCCCCchhhhhc---CCCCEEECCCCcCC
Confidence 99999999999998875443 68999999999876
No 91
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.57 E-value=1.6e-14 Score=137.71 Aligned_cols=149 Identities=14% Similarity=0.179 Sum_probs=126.2
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.+++.+..+..+|.......+++|++++|.++.++ .+. .+++|++|+|++|.++...+..|..+++|++|+|++
T Consensus 46 L~~L~l~~n~i~~l~~l~~l~~L~~L~l~~n~~~~~~--~l~--~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 121 (197)
T 4ezg_A 46 LTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYN--PIS--GLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121 (197)
T ss_dssp CCEEEEESSCCSCCTTGGGCTTCSEEEEESCCCSCCG--GGT--TCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCS
T ss_pred ccEEeccCCCccChHHHhcCCCCCEEEccCCCCCcch--hhh--cCCCCCEEEeECCccCcccChhhcCCCCCCEEEecC
Confidence 3578888888988885444456999999999888775 343 799999999999999986667799999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCC-CCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCC
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNP-ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSH 185 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~-i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 185 (600)
|.++......|..+++|++|+|++|. ++.++ .+..+++|+.|++++|.+..+. .+..+++|+.|++++|++..
T Consensus 122 n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 122 SAHDDSILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC----
T ss_pred CccCcHhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcccCC
Confidence 99998666678999999999999998 88874 5889999999999999999985 68889999999999998764
No 92
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.57 E-value=2.1e-14 Score=148.93 Aligned_cols=165 Identities=18% Similarity=0.237 Sum_probs=138.7
Q ss_pred eEEEccCC-CCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 30 QWMECRDK-FLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 30 ~~v~C~~~-~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
+.++..+. .+..++.......+++|++++|.+..++. +. .+++|+.|++++|.+..+.+ +..+++|++|++++
T Consensus 135 ~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~--~~--~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 208 (347)
T 4fmz_A 135 YSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP--IA--NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYV 208 (347)
T ss_dssp CEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG--GG--GCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred eEEECCCCCCcccccchhhCCCCcEEEecCCCcCCchh--hc--cCCCCCEEEccCCccccccc--ccCCCccceeeccc
Confidence 45666555 44444443344459999999999998876 43 79999999999999988865 88999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.++.++. +..+++|++|++++|.++.+.+ +..+++|+.|++++|.+..+ ..+..+++|+.|++++|.+..++
T Consensus 209 n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~- 281 (347)
T 4fmz_A 209 NQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDIS- 281 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCCG-
T ss_pred CCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCCh-
Confidence 99998876 7788999999999999998865 88899999999999999987 46888999999999999999984
Q ss_pred ccccccccccEEEccCCcCc
Q psy1672 189 RSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 189 ~~~~~l~~L~~L~l~~N~~~ 208 (600)
.+..+++|+.|++.+|.+.
T Consensus 282 -~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 282 -VLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp -GGGGCTTCSEEECCSSCCC
T ss_pred -hhcCCCCCCEEECcCCcCC
Confidence 5788899999999999864
No 93
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.57 E-value=1.4e-14 Score=161.81 Aligned_cols=165 Identities=21% Similarity=0.266 Sum_probs=131.6
Q ss_pred CCCCCCeecccCCceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcccc
Q psy1672 16 SCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGAL 95 (600)
Q Consensus 16 ~Cp~~C~C~~~~~~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f 95 (600)
.||..|.|.... ...++|.+.+++.+|..++.. ++.|+|++|.|+.|+. .+.+|+.|+|++|+|+.++.
T Consensus 30 ~~~~~~~c~~~~-l~~L~ls~n~L~~lp~~l~~~-L~~L~L~~N~l~~lp~------~l~~L~~L~Ls~N~l~~lp~--- 98 (622)
T 3g06_A 30 VVQKMRACLNNG-NAVLNVGESGLTTLPDCLPAH-ITTLVIPDNNLTSLPA------LPPELRTLEVSGNQLTSLPV--- 98 (622)
T ss_dssp HHHHHHHHHHHC-CCEEECCSSCCSCCCSCCCTT-CSEEEECSCCCSCCCC------CCTTCCEEEECSCCCSCCCC---
T ss_pred cCcccccccCCC-CcEEEecCCCcCccChhhCCC-CcEEEecCCCCCCCCC------cCCCCCEEEcCCCcCCcCCC---
Confidence 466678887653 578999999999999988755 9999999999999986 36899999999999998875
Q ss_pred CCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCE
Q psy1672 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLES 175 (600)
Q Consensus 96 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 175 (600)
.+++|++|+|++|.|+.++. .+.+|+.|+|++|.++.++.. +++|+.|+|++|.+..++. .+.+|+.
T Consensus 99 -~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~~----l~~L~~L~Ls~N~l~~l~~----~~~~L~~ 165 (622)
T 3g06_A 99 -LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTSLPVL----PPGLQELSVSDNQLASLPA----LPSELCK 165 (622)
T ss_dssp -CCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCCSCCCC----CCTTCCE
T ss_pred -CCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCcCCCC----CCCCCEEECcCCcCCCcCC----ccCCCCE
Confidence 67899999999999999877 467799999999998887542 4788899999998887743 3456777
Q ss_pred EEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 176 IKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 176 L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
|++++|.|+.++ ..+++|+.|++.+|.+.
T Consensus 166 L~L~~N~l~~l~----~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 166 LWAYNNQLTSLP----MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp EECCSSCCSCCC----CCCTTCCEEECCSSCCS
T ss_pred EECCCCCCCCCc----ccCCCCcEEECCCCCCC
Confidence 777777777765 23456677777776654
No 94
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.56 E-value=6.1e-15 Score=150.39 Aligned_cols=179 Identities=19% Similarity=0.216 Sum_probs=141.8
Q ss_pred eEEEccCCCCCccCC---CCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcc-cCccccCCCCCccEEE
Q psy1672 30 QWMECRDKFLITIPE---APESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQ-IDSGALDGLTNLIEID 105 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~---~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~-i~~~~f~~l~~L~~L~ 105 (600)
+.++..+..+..++. ......+++|++++|.+..+....|. .+.+|+.|+|++|.+.. +.+..|..+++|++|+
T Consensus 104 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 104 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN--GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp CEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTT--TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcc--cCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 345555566666553 22223489999999998877777776 78999999999999876 4566789999999999
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCC-CCCEEEcCCCcCC
Q psy1672 106 LSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK-SLESIKLNGNRLS 184 (600)
Q Consensus 106 Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~-~L~~L~Ls~N~l~ 184 (600)
|++|.|+.+++..|..+++|+.|+|++|.++.+....|..+++|+.|+|++|.+..+.+..+..++ +|+.|+|++|.+.
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 999999999888899999999999999999999888899999999999999999999888888884 9999999999997
Q ss_pred CCCc-cc-ccccccccEEEccCCcCccc
Q psy1672 185 HFPV-RS-VEPLLKLMMIELHDNPWVCD 210 (600)
Q Consensus 185 ~l~~-~~-~~~l~~L~~L~l~~N~~~C~ 210 (600)
.... .. ..-+..++.+.+..+.+.|.
T Consensus 262 ~~c~~~~~~~~l~~~~~~~~~~~~~~C~ 289 (306)
T 2z66_A 262 CTCEHQSFLQWIKDQRQLLVEVERMECA 289 (306)
T ss_dssp CSGGGHHHHHHHHHTGGGBSCGGGCBEE
T ss_pred cccChHHHHHHHHhhhhhhccccccccC
Confidence 5421 11 12233444455566677774
No 95
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.56 E-value=6.2e-15 Score=150.89 Aligned_cols=156 Identities=14% Similarity=0.020 Sum_probs=129.0
Q ss_pred ceEEEeeCCCCCCCChhhh--cccCCCCccEEEeecccCcccCc----cccCCCCCccEEEccCCCCCCCCccccCCCCC
Q psy1672 51 TQVLDMSGNNLQILPKEAF--RRAGLLNLQKLFLARCHIGQIDS----GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRF 124 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f--~~~~l~~L~~L~L~~n~l~~i~~----~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~ 124 (600)
+++|+|++|.+....+..+ . .+.+|+.|+|++|.++...+ ..+..+++|++|+|++|.|+.+++..|..+++
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~--~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEA--TGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSC--CCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred eeEEEeeCCEeccchhhhhhhc--cCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 9999999999986555444 4 79999999999999986432 44567999999999999999999889999999
Q ss_pred CCEEEccCCCCCc---cCc-ccccCCCCcceeeCCCCcCcccChh---hhcCCCCCCEEEcCCCcCCCCCccccccc---
Q psy1672 125 LRDLNLARNPISK---IEK-GAFQFVPGLVKLDMSESRLEHISPE---AFTGAKSLESIKLNGNRLSHFPVRSVEPL--- 194 (600)
Q Consensus 125 L~~L~Ls~N~i~~---l~~-~~~~~l~~L~~L~Ls~n~l~~i~~~---~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l--- 194 (600)
|++|+|++|++.. +.. ..+..+++|+.|+|++|+++.++.. .+..+++|+.|+|++|.+..+.+..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999999764 222 2346789999999999999876432 35678999999999999999854455555
Q ss_pred ccccEEEccCCcCc
Q psy1672 195 LKLMMIELHDNPWV 208 (600)
Q Consensus 195 ~~L~~L~l~~N~~~ 208 (600)
++|+.|++++|.+.
T Consensus 251 ~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 251 SALNSLNLSFAGLE 264 (310)
T ss_dssp TTCCCEECCSSCCC
T ss_pred CcCCEEECCCCCCC
Confidence 69999999999876
No 96
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.56 E-value=1.9e-14 Score=165.60 Aligned_cols=177 Identities=20% Similarity=0.141 Sum_probs=132.0
Q ss_pred eEEEccCCCCC-ccCCCCC-CCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEcc
Q psy1672 30 QWMECRDKFLI-TIPEAPE-SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107 (600)
Q Consensus 30 ~~v~C~~~~L~-~ip~~~~-~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls 107 (600)
+.++..+..+. .+|..+. ...+++|+|++|.++...+..+. .+++|+.|+|++|++....+..|..+++|++|+|+
T Consensus 445 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 522 (768)
T 3rgz_A 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS--NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG--GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred CEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHh--cCCCCCEEEccCCccCCcCChHHhcCCCCCEEECC
Confidence 45666666666 4454322 23488899999988854444454 68889999999888887777778888888888888
Q ss_pred CCCCCCCCccccCCCCCCCEEEccCCCCCccCcc----------------------------------------------
Q psy1672 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKG---------------------------------------------- 141 (600)
Q Consensus 108 ~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~---------------------------------------------- 141 (600)
+|.++...+..+..+++|+.|+|++|.++...+.
T Consensus 523 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (768)
T 3rgz_A 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 602 (768)
T ss_dssp SSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGG
T ss_pred CCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccch
Confidence 8888855555788888888888888877532221
Q ss_pred ------------------------cccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccc
Q psy1672 142 ------------------------AFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKL 197 (600)
Q Consensus 142 ------------------------~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 197 (600)
.|..+++|+.|+|++|++.+..|..++.+++|+.|+|++|.++...+..+..++.|
T Consensus 603 ~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L 682 (768)
T 3rgz_A 603 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 682 (768)
T ss_dssp GGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred hhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCC
Confidence 23345677888888888887777888888888888888888886666778888888
Q ss_pred cEEEccCCcCc
Q psy1672 198 MMIELHDNPWV 208 (600)
Q Consensus 198 ~~L~l~~N~~~ 208 (600)
+.|++++|.+.
T Consensus 683 ~~LdLs~N~l~ 693 (768)
T 3rgz_A 683 NILDLSSNKLD 693 (768)
T ss_dssp CEEECCSSCCE
T ss_pred CEEECCCCccc
Confidence 88888888765
No 97
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.55 E-value=1.4e-14 Score=166.71 Aligned_cols=161 Identities=19% Similarity=0.153 Sum_probs=112.9
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
+++|++++|.++...+..+. .+.+|+.|+|++|.++...+..|..+++|++|+|++|.++...+..|..+++|++|+|
T Consensus 396 L~~L~L~~n~l~~~~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 473 (768)
T 3rgz_A 396 LQELYLQNNGFTGKIPPTLS--NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473 (768)
T ss_dssp CCEEECCSSEEEEECCGGGG--GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred ccEEECCCCccccccCHHHh--cCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEe
Confidence 66666666666633333333 5777777777777777666666777777777777777777555556777777777777
Q ss_pred cCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCccc
Q psy1672 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCD 210 (600)
Q Consensus 131 s~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~ 210 (600)
++|.++...+..|..+++|+.|+|++|++....+..++.+++|+.|+|++|.+....+..+..+++|+.|++.+|++.+.
T Consensus 474 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 553 (768)
T 3rgz_A 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESB
T ss_pred cCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCc
Confidence 77777766666677777777777777777766667777777777777777777755556677777777777777777665
Q ss_pred ccc
Q psy1672 211 CNM 213 (600)
Q Consensus 211 C~l 213 (600)
+..
T Consensus 554 ip~ 556 (768)
T 3rgz_A 554 IPA 556 (768)
T ss_dssp CCG
T ss_pred CCh
Confidence 443
No 98
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.55 E-value=7e-14 Score=161.50 Aligned_cols=177 Identities=18% Similarity=0.201 Sum_probs=97.3
Q ss_pred eEEEccCCCCCccCCCCCC---CCceEEEeeCCCCCCCChhhh---cccCCCCccEEEeecccCcccCccccCCCCCccE
Q psy1672 30 QWMECRDKFLITIPEAPES---ELTQVLDMSGNNLQILPKEAF---RRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIE 103 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~---~~l~~L~Ls~n~L~~l~~~~f---~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~ 103 (600)
+.++..++.+..+|..+.. ..++.|+|++|.+....+... ....+.+|+.|+|++|.+..++...|..+++|++
T Consensus 622 ~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~ 701 (876)
T 4ecn_A 622 EGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPIST 701 (876)
T ss_dssp CEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSE
T ss_pred CEEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCE
Confidence 4556666666666654322 126666666666654322111 0002346666666666666665555556666666
Q ss_pred EEccCCCCCCCCccccCCCC-------CCCEEEccCCCCCccCcccc-cCCCCcceeeCCCCcCcccChhhhcCCCCCCE
Q psy1672 104 IDLSDNLLTSIPSLTFQSVR-------FLRDLNLARNPISKIEKGAF-QFVPGLVKLDMSESRLEHISPEAFTGAKSLES 175 (600)
Q Consensus 104 L~Ls~N~l~~l~~~~f~~l~-------~L~~L~Ls~N~i~~l~~~~~-~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 175 (600)
|+|++|.|+.++...|.... +|+.|+|++|.++.++...+ ..+++|+.|+|++|+|..+ +..+..+++|+.
T Consensus 702 L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~l-p~~l~~L~~L~~ 780 (876)
T 4ecn_A 702 IILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSSF-PTQPLNSSQLKA 780 (876)
T ss_dssp EECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSSC-CCGGGGCTTCCE
T ss_pred EECCCCcCCccChHHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCcc-chhhhcCCCCCE
Confidence 66666666666655444322 56666666666665543322 2566666666666666665 334555666666
Q ss_pred EEcCC------CcCCCCCcccccccccccEEEccCCcC
Q psy1672 176 IKLNG------NRLSHFPVRSVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 176 L~Ls~------N~l~~l~~~~~~~l~~L~~L~l~~N~~ 207 (600)
|+|++ |.+....+..+..+++|+.|++++|.+
T Consensus 781 L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 781 FGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp EECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred EECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 66654 444444444555566666666666654
No 99
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.55 E-value=2.8e-14 Score=138.61 Aligned_cols=109 Identities=28% Similarity=0.437 Sum_probs=79.4
Q ss_pred CccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcC
Q psy1672 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLN 179 (600)
Q Consensus 100 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls 179 (600)
+|+.|+|++|.|+.+++..|..+++|+.|+|++|.++.+.+..|..+++|+.|+|++|.|+.+++..|.++++|+.|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 44555555555555555555555556666666666655555566666667777777777777766777788899999999
Q ss_pred CCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 180 GNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 180 ~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|.|..++...|..+++|+.|++.+|.+.
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 99999998889999999999999999864
No 100
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.54 E-value=3.8e-15 Score=162.32 Aligned_cols=177 Identities=15% Similarity=0.189 Sum_probs=145.0
Q ss_pred eEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccC-CCCCccEEEccC
Q psy1672 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD-GLTNLIEIDLSD 108 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~-~l~~L~~L~Ls~ 108 (600)
..++..++.+..++...... ++.|+|++|.|+.+++..|. .+.+|+.|+|++|.++.+.+..|. .+++|++|+|++
T Consensus 102 ~~L~L~~N~l~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~ 178 (487)
T 3oja_A 102 ETLHAANNNISRVSCSRGQG-KKNIYLANNKITMLRDLDEG--CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178 (487)
T ss_dssp CEEECCSSCCCCEEECCCSS-CEEEECCSSCCCSGGGBCGG--GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTT
T ss_pred CEEECcCCcCCCCCccccCC-CCEEECCCCCCCCCCchhhc--CCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCC
Confidence 34566666666666544444 99999999999998877776 799999999999999998777776 799999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCC-CCC
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLS-HFP 187 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~ 187 (600)
|.|+.++. +..+++|+.|+|++|.++.+++. |..+++|+.|+|++|.|..++ ..+..+++|+.|+|++|.+. ...
T Consensus 179 N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~lp-~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 179 NFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLIE-KALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp SCCCEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEEC-TTCCCCTTCCEEECTTCCBCHHHH
T ss_pred Cccccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcccc-hhhccCCCCCEEEcCCCCCcCcch
Confidence 99999865 34589999999999999998765 888999999999999999985 45888999999999999998 222
Q ss_pred cccccccccccEEEcc-------CCcCcccccc
Q psy1672 188 VRSVEPLLKLMMIELH-------DNPWVCDCNM 213 (600)
Q Consensus 188 ~~~~~~l~~L~~L~l~-------~N~~~C~C~l 213 (600)
+..+..++.|+.+++. .+++.|.|..
T Consensus 255 ~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~~ 287 (487)
T 3oja_A 255 RDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPT 287 (487)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTSSSSCCCSSTT
T ss_pred HHHHHhCCCCcEEeccccccccCCCcccccCCc
Confidence 3456667777777775 7777777643
No 101
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.54 E-value=3.5e-15 Score=153.25 Aligned_cols=169 Identities=15% Similarity=0.180 Sum_probs=143.5
Q ss_pred eEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcccc-CCCCCccEEEccC
Q psy1672 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGAL-DGLTNLIEIDLSD 108 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f-~~l~~L~~L~Ls~ 108 (600)
..++..+..+..++...... +++|++++|.++.++...|. .+.+|+.|+|++|.++.+.+..| ..+++|++|+|++
T Consensus 102 ~~L~l~~n~l~~~~~~~~~~-L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~ 178 (317)
T 3o53_A 102 ETLHAANNNISRVSCSRGQG-KKNIYLANNKITMLRDLDEG--CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178 (317)
T ss_dssp CEEECCSSCCSEEEECCCSS-CEEEECCSSCCCSGGGBCTG--GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTT
T ss_pred CEEECCCCccCCcCccccCC-CCEEECCCCCCCCccchhhh--ccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCC
Confidence 46777888888887655554 99999999999999887776 79999999999999999877666 4789999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCC-CCC
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLS-HFP 187 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~ 187 (600)
|.|+.++.. ..+++|++|+|++|.++.+++. |..+++|+.|+|++|+|+.++ ..+..+++|+.|+|++|.+. ...
T Consensus 179 N~l~~~~~~--~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~~l~-~~~~~l~~L~~L~l~~N~~~~~~~ 254 (317)
T 3o53_A 179 NFIYDVKGQ--VVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLIE-KALRFSQNLEHFDLRGNGFHCGTL 254 (317)
T ss_dssp SCCCEEECC--CCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEEC-TTCCCCTTCCEEECTTCCCBHHHH
T ss_pred CcCcccccc--cccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCcccchh-hHhhcCCCCCEEEccCCCccCcCH
Confidence 999998653 3489999999999999998665 888999999999999999985 46888999999999999998 444
Q ss_pred cccccccccccEEEccCC
Q psy1672 188 VRSVEPLLKLMMIELHDN 205 (600)
Q Consensus 188 ~~~~~~l~~L~~L~l~~N 205 (600)
...+..+++|+.+++.++
T Consensus 255 ~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 255 RDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp HHHHHTCHHHHHHHHHHH
T ss_pred HHHHhccccceEEECCCc
Confidence 466777788888877643
No 102
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.54 E-value=1.8e-14 Score=160.67 Aligned_cols=160 Identities=22% Similarity=0.317 Sum_probs=137.8
Q ss_pred CCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCC
Q psy1672 36 DKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115 (600)
Q Consensus 36 ~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~ 115 (600)
+..+..+........|+.|++++|.|..++. +. .+++|+.|+|++|.|..+.+ |..+++|++|+|++|.|+.++
T Consensus 30 ~~~i~~~~~~~~L~~L~~L~l~~n~i~~l~~--l~--~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~ 103 (605)
T 1m9s_A 30 KKSVTDAVTQNELNSIDQIIANNSDIKSVQG--IQ--YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS 103 (605)
T ss_dssp CSCTTSEECHHHHTTCCCCBCTTCCCCCCTT--GG--GCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT
T ss_pred CCCcccccchhcCCCCCEEECcCCCCCCChH--Hc--cCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh
Confidence 3444444333223348999999999999874 43 79999999999999999876 899999999999999999987
Q ss_pred ccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccc
Q psy1672 116 SLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195 (600)
Q Consensus 116 ~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 195 (600)
.|..+++|+.|+|++|.+..+ ..+..+++|+.|+|++|.|..+ ..+..+++|+.|+|++|.|..+++ +..++
T Consensus 104 --~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~ 175 (605)
T 1m9s_A 104 --SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLT 175 (605)
T ss_dssp --TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred --hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCC
Confidence 488999999999999999987 3488999999999999999998 578899999999999999999875 88899
Q ss_pred cccEEEccCCcCcc
Q psy1672 196 KLMMIELHDNPWVC 209 (600)
Q Consensus 196 ~L~~L~l~~N~~~C 209 (600)
+|+.|+|++|.+..
T Consensus 176 ~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 176 KLQNLYLSKNHISD 189 (605)
T ss_dssp TCCEEECCSSCCCB
T ss_pred CCCEEECcCCCCCC
Confidence 99999999998753
No 103
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.53 E-value=3.5e-14 Score=141.86 Aligned_cols=149 Identities=19% Similarity=0.270 Sum_probs=130.2
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.+++.+.++..++.......++.|+|++|.|+.++. +. .+++|+.|+|++|+++.++. +.. ++|++|+|++
T Consensus 43 L~~L~l~~n~i~~l~~l~~l~~L~~L~L~~N~i~~~~~--l~--~l~~L~~L~L~~N~l~~l~~--~~~-~~L~~L~L~~ 115 (263)
T 1xeu_A 43 VQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSP--LK--DLTKLEELSVNRNRLKNLNG--IPS-ACLSRLFLDN 115 (263)
T ss_dssp CSEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GT--TCSSCCEEECCSSCCSCCTT--CCC-SSCCEEECCS
T ss_pred CcEEECcCCCcccchHHhhCCCCCEEECCCCccCCChh--hc--cCCCCCEEECCCCccCCcCc--ccc-CcccEEEccC
Confidence 45788999999999854444559999999999999987 54 79999999999999999865 334 8999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.|+.++ .+..+++|+.|+|++|+++.+. .+..+++|+.|+|++|++..+ ..+..+++|+.|++++|.+...+.
T Consensus 116 N~l~~~~--~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~~ 189 (263)
T 1xeu_A 116 NELRDTD--SLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEPV 189 (263)
T ss_dssp SCCSBSG--GGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCCE
T ss_pred CccCCCh--hhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCcc
Confidence 9999985 4889999999999999999984 588999999999999999998 678899999999999999988764
Q ss_pred cc
Q psy1672 189 RS 190 (600)
Q Consensus 189 ~~ 190 (600)
..
T Consensus 190 ~~ 191 (263)
T 1xeu_A 190 KY 191 (263)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 104
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.53 E-value=8.3e-14 Score=156.81 Aligned_cols=177 Identities=20% Similarity=0.227 Sum_probs=135.2
Q ss_pred eEEEccCCCCCccCCCCCC-CC-ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccC-------CCCC
Q psy1672 30 QWMECRDKFLITIPEAPES-EL-TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD-------GLTN 100 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~-~~-l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~-------~l~~ 100 (600)
+.++..+..+..+|..+.. .. +++|++++|.++.+|..... ..+.+|+.|+|++|.+....+..|. .+.+
T Consensus 356 ~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~ 434 (636)
T 4eco_A 356 ASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDA-KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGIN 434 (636)
T ss_dssp SEEECCSSEEEECCTTSEEECTTCCEEECCSSCCSSCCSCCCT-TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCC
T ss_pred CEEECCCCccccccHhhhhhcccCcEEEccCCcCcccchhhhh-cccCccCEEECcCCcCCCcchhhhcccccccccCCC
Confidence 3566667777777765432 34 88899999999888864331 2344889999999988887776677 7778
Q ss_pred ccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCC-------CcceeeCCCCcCcccChhhh-cCCCC
Q psy1672 101 LIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP-------GLVKLDMSESRLEHISPEAF-TGAKS 172 (600)
Q Consensus 101 L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~-------~L~~L~Ls~n~l~~i~~~~~-~~l~~ 172 (600)
|++|+|++|.|+.++...|..+++|++|+|++|.++.++...+..+. +|+.|+|++|+|+.++...+ ..+++
T Consensus 435 L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l~~ 514 (636)
T 4eco_A 435 VSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPY 514 (636)
T ss_dssp EEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGGGSTTTCTT
T ss_pred CCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCccChhhhhccCCC
Confidence 99999999999888887777788899999999988887776665443 88899999999887754433 37888
Q ss_pred CCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 173 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
|+.|+|++|.+..++ ..+..+++|+.|++.+|...
T Consensus 515 L~~L~Ls~N~l~~ip-~~~~~l~~L~~L~Ls~N~~l 549 (636)
T 4eco_A 515 LVGIDLSYNSFSKFP-TQPLNSSTLKGFGIRNQRDA 549 (636)
T ss_dssp CCEEECCSSCCSSCC-CGGGGCSSCCEEECCSCBCT
T ss_pred cCEEECCCCCCCCcC-hhhhcCCCCCEEECCCCccc
Confidence 999999999988875 45667888899988776633
No 105
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.53 E-value=5e-14 Score=152.51 Aligned_cols=167 Identities=22% Similarity=0.309 Sum_probs=141.2
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.++..+..+..++.......++.|++++|.++.++ .+. .+++|+.|++++|.+..+.+ +..+++|++|+|++
T Consensus 201 L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~--~l~--~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 274 (466)
T 1o6v_A 201 LESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG--TLA--SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 274 (466)
T ss_dssp CSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG--GGG--GCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred CCEEEecCCcccccccccccCCCCEEECCCCCcccch--hhh--cCCCCCEEECCCCccccchh--hhcCCCCCEEECCC
Confidence 3567777777777655333445999999999999875 343 68999999999999988865 88999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.++.+++ +..+++|+.|+|++|.++.+.+ +..+++|+.|+|++|++..+.+ +..+++|+.|++++|.+..++
T Consensus 275 n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~- 347 (466)
T 1o6v_A 275 NQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVS- 347 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCG-
T ss_pred CccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCch-
Confidence 99998876 7889999999999999998755 7889999999999999998855 778999999999999999884
Q ss_pred ccccccccccEEEccCCcCcc
Q psy1672 189 RSVEPLLKLMMIELHDNPWVC 209 (600)
Q Consensus 189 ~~~~~l~~L~~L~l~~N~~~C 209 (600)
.+..+++|+.|++.+|.+..
T Consensus 348 -~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 348 -SLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp -GGTTCTTCCEEECCSSCCCB
T ss_pred -hhccCCCCCEEeCCCCccCc
Confidence 67888999999999998753
No 106
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.53 E-value=4.8e-14 Score=136.96 Aligned_cols=132 Identities=17% Similarity=0.298 Sum_probs=118.0
Q ss_pred ceEEEccCCCCCccCC-C--CCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEE
Q psy1672 29 KQWMECRDKFLITIPE-A--PESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEID 105 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~-~--~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~ 105 (600)
.+.++..++.++.++. . .....+++|+|++|.|+.++...|. ++.+|+.|+|++|.|+.+.+..|.++++|++|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFE--GASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTT--TCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhC--CCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 3578888999998853 2 2234599999999999999988887 899999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCccc
Q psy1672 106 LSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI 162 (600)
Q Consensus 106 Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i 162 (600)
|++|.|+.+++..|..+++|+.|+|++|.++.+.+..|..+++|+.|+|++|.+.+-
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 999999999888999999999999999999999888899999999999999988754
No 107
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.53 E-value=1.4e-13 Score=148.64 Aligned_cols=160 Identities=19% Similarity=0.244 Sum_probs=118.6
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.+++.+..++.+|.......+++|+|++|.|+.++ +. .+.+|++|+|++|.++.++ |..+++|++|+|++
T Consensus 44 L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~---~~--~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~L~~ 115 (457)
T 3bz5_A 44 LTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLD---LS--QNTNLTYLACDSNKLTNLD---VTPLTKLTYLNCDT 115 (457)
T ss_dssp CCEEECCSSCCCCCTTGGGCTTCSEEECCSSCCSCCC---CT--TCTTCSEEECCSSCCSCCC---CTTCTTCCEEECCS
T ss_pred CCEEEccCCCcccChhhcccCCCCEEEccCCcCCeEc---cc--cCCCCCEEECcCCCCceee---cCCCCcCCEEECCC
Confidence 4578888888888875444455888999999888875 33 6888899999888888873 78888888888888
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCC-cCcccChhhhcCCCCCCEEEcCCCcCCCCC
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAKSLESIKLNGNRLSHFP 187 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n-~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~ 187 (600)
|.++.++ +..+++|++|++++|.++.++ +..+++|+.|++++| .+..+ .+..+++|+.|++++|.++.++
T Consensus 116 N~l~~l~---~~~l~~L~~L~l~~N~l~~l~---l~~l~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~l~ 186 (457)
T 3bz5_A 116 NKLTKLD---VSQNPLLTYLNCARNTLTEID---VSHNTQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITELD 186 (457)
T ss_dssp SCCSCCC---CTTCTTCCEEECTTSCCSCCC---CTTCTTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCeec---CCCCCcCCEEECCCCccceec---cccCCcCCEEECCCCCccccc---ccccCCcCCEEECCCCccceec
Confidence 8888874 677888888888888888762 566777777777777 34444 3556677777777777777765
Q ss_pred cccccccccccEEEccCCcCc
Q psy1672 188 VRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 188 ~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+..+++|+.|++.+|.+.
T Consensus 187 ---l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 187 ---VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp ---CTTCTTCCEEECCSSCCS
T ss_pred ---cccCCCCCEEECcCCcCC
Confidence 455666777777766654
No 108
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.52 E-value=2.7e-14 Score=132.34 Aligned_cols=132 Identities=22% Similarity=0.271 Sum_probs=117.9
Q ss_pred CCCCccEEEeecccCc--ccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcc
Q psy1672 73 GLLNLQKLFLARCHIG--QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLV 150 (600)
Q Consensus 73 ~l~~L~~L~L~~n~l~--~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~ 150 (600)
...+|+.|+|++|.+. .++ ..|..+++|++|+|++|.|+.+ ..|..+++|++|+|++|.++...+..+..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIE-GLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCS-SCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHH-HHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 4678999999999998 664 4578999999999999999998 5788999999999999999986677777899999
Q ss_pred eeeCCCCcCcccCh-hhhcCCCCCCEEEcCCCcCCCCCc---ccccccccccEEEccCCcC
Q psy1672 151 KLDMSESRLEHISP-EAFTGAKSLESIKLNGNRLSHFPV---RSVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 151 ~L~Ls~n~l~~i~~-~~~~~l~~L~~L~Ls~N~l~~l~~---~~~~~l~~L~~L~l~~N~~ 207 (600)
.|+|++|.|+.++. ..+..+++|+.|++++|.+..++. ..+..+++|+.|++.+|..
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 99999999999853 788899999999999999999986 5788899999999998874
No 109
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.51 E-value=1e-13 Score=150.07 Aligned_cols=164 Identities=21% Similarity=0.316 Sum_probs=115.5
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.+++.+..+..+|.......+++|+|++|.++.++. +. .+.+|+.|++++|.+..+.+ |..+++|++|+|++
T Consensus 48 l~~L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~--~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 48 VTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121 (466)
T ss_dssp CCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GT--TCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred ccEEecCCCCCccCcchhhhcCCCEEECCCCccCCchh--hh--ccccCCEEECCCCccccChh--hcCCCCCCEEECCC
Confidence 45788888888888864444559999999999998876 44 78999999999999988866 88999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.++.+++ +..+++|++|++++|.+..+. .+..+++|+.|+++ |.+..+. .+..+++|+.|++++|.+..++
T Consensus 122 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~~- 193 (466)
T 1o6v_A 122 NQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDIS- 193 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCCG-
T ss_pred CCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCCh-
Confidence 99998875 788899999999999887763 25555555555553 2333331 2445555555555555555442
Q ss_pred ccccccccccEEEccCCcC
Q psy1672 189 RSVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 189 ~~~~~l~~L~~L~l~~N~~ 207 (600)
.+..+++|+.|++.+|.+
T Consensus 194 -~l~~l~~L~~L~l~~n~l 211 (466)
T 1o6v_A 194 -VLAKLTNLESLIATNNQI 211 (466)
T ss_dssp -GGGGCTTCSEEECCSSCC
T ss_pred -hhccCCCCCEEEecCCcc
Confidence 244445555555555443
No 110
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=2.4e-13 Score=157.12 Aligned_cols=181 Identities=17% Similarity=0.177 Sum_probs=142.7
Q ss_pred eEEEccCCCCCccCCCCCC-CC-ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccc---cC--CCCCcc
Q psy1672 30 QWMECRDKFLITIPEAPES-EL-TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGA---LD--GLTNLI 102 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~-~~-l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~---f~--~l~~L~ 102 (600)
+.++..++.+..+|..+.. .. |+.|+|++|.|+.+|... ......+|+.|+|++|.+....+.. +. .+.+|+
T Consensus 598 ~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~-~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~ 676 (876)
T 4ecn_A 598 TDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIF-NAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAS 676 (876)
T ss_dssp SEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCCSCCSCC-CTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEE
T ss_pred eEEECcCCccccchHHHhhccccCCEEECcCCCCCcCchhh-hccccCCCCEEECcCCcCCCccccchhhhccccCCCcC
Confidence 4678888888888865443 34 999999999999888543 3123345999999999997654321 22 345899
Q ss_pred EEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCC-------CCcceeeCCCCcCcccChhhhc--CCCCC
Q psy1672 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV-------PGLVKLDMSESRLEHISPEAFT--GAKSL 173 (600)
Q Consensus 103 ~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l-------~~L~~L~Ls~n~l~~i~~~~~~--~l~~L 173 (600)
+|+|++|.|+.++...+..+++|+.|+|++|.++.++...+... ++|+.|+|++|+|..++. .+. .+++|
T Consensus 677 ~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~-~l~~~~l~~L 755 (876)
T 4ecn_A 677 TVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSD-DFRATTLPYL 755 (876)
T ss_dssp EEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCG-GGSTTTCTTC
T ss_pred EEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCccchH-HhhhccCCCc
Confidence 99999999999998878789999999999999998877766544 389999999999998854 454 89999
Q ss_pred CEEEcCCCcCCCCCcccccccccccEEEccCCcCcccccc
Q psy1672 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNM 213 (600)
Q Consensus 174 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~C~C~l 213 (600)
+.|+|++|.|..++ ..+..+++|+.|++++|+....|.+
T Consensus 756 ~~L~Ls~N~L~~lp-~~l~~L~~L~~L~Ls~N~~ls~N~l 794 (876)
T 4ecn_A 756 SNMDVSYNCFSSFP-TQPLNSSQLKAFGIRHQRDAEGNRI 794 (876)
T ss_dssp CEEECCSSCCSSCC-CGGGGCTTCCEEECCCCBCTTCCBC
T ss_pred CEEEeCCCCCCccc-hhhhcCCCCCEEECCCCCCcccccc
Confidence 99999999999986 4567889999999998774433443
No 111
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.50 E-value=1.7e-13 Score=133.98 Aligned_cols=127 Identities=23% Similarity=0.331 Sum_probs=94.6
Q ss_pred cEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCC
Q psy1672 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES 157 (600)
Q Consensus 78 ~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n 157 (600)
+.++.++++++.++... .++|++|+|++|.|+.+.+..|..+++|+.|+|++|.|+.++...|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~~ip~~~---~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGI---PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCccCCCC---CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 44555555555554321 256666777777777666666666777777777777777776666777777777778888
Q ss_pred cCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCcCc
Q psy1672 158 RLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 158 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|+.+.+..|..+++|+.|+|++|+|..++. .+..+++|+.|++.+|.+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~-~~~~l~~L~~L~L~~N~l~ 148 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLTELPR-GIERLTHLTHLALDQNQLK 148 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCSCCT-TGGGCTTCSEEECCSSCCC
T ss_pred cCCccChhHhCcchhhCeEeccCCcccccCc-ccccCCCCCEEECCCCcCC
Confidence 8887777778889999999999999999874 5688899999999999865
No 112
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2.9e-14 Score=133.35 Aligned_cols=126 Identities=13% Similarity=0.152 Sum_probs=58.2
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 130 (600)
+++|++++|.++.++. ... ..++|+.|+|++|.|+.+ ..|..+++|++|+|++|.|+.+++..|..+++|++|+|
T Consensus 21 L~~L~l~~n~l~~i~~-~~~--~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 21 DRELDLRGYKIPVIEN-LGA--TLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp CEEEECTTSCCCSCCC-GGG--GTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred ceEEEeeCCCCchhHH-hhh--cCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 5555555555555432 111 122555555555555554 23455555555555555555554444444555555555
Q ss_pred cCCCCCccCc-ccccCCCCcceeeCCCCcCcccChh---hhcCCCCCCEEEcCCC
Q psy1672 131 ARNPISKIEK-GAFQFVPGLVKLDMSESRLEHISPE---AFTGAKSLESIKLNGN 181 (600)
Q Consensus 131 s~N~i~~l~~-~~~~~l~~L~~L~Ls~n~l~~i~~~---~~~~l~~L~~L~Ls~N 181 (600)
++|.++.++. ..+..+++|+.|++++|.+..++.. .+..+++|+.|++++|
T Consensus 96 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 96 TNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp CSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEEC
T ss_pred CCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcC
Confidence 5555544432 2344444444444444444444222 2334444444444444
No 113
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.49 E-value=4.9e-14 Score=127.78 Aligned_cols=126 Identities=20% Similarity=0.270 Sum_probs=70.5
Q ss_pred CCccEEEeecccCc--ccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCccee
Q psy1672 75 LNLQKLFLARCHIG--QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152 (600)
Q Consensus 75 ~~L~~L~L~~n~l~--~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L 152 (600)
.+|+.|++++|.++ .++ ..|..+++|++|+|++|.|+.+ ..|..+++|++|+|++|.++...+..+..+++|+.|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLE-GLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCC-SCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHH-HHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 45555555555555 332 2445555666666666665555 345555566666666666655334444455666666
Q ss_pred eCCCCcCcccC-hhhhcCCCCCCEEEcCCCcCCCCCc---ccccccccccEEEcc
Q psy1672 153 DMSESRLEHIS-PEAFTGAKSLESIKLNGNRLSHFPV---RSVEPLLKLMMIELH 203 (600)
Q Consensus 153 ~Ls~n~l~~i~-~~~~~~l~~L~~L~Ls~N~l~~l~~---~~~~~l~~L~~L~l~ 203 (600)
++++|.++.++ +..+..+++|+.|++++|.++.++. ..+..+++|+.|++.
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 66666665542 2455556666666666666666554 345555666666543
No 114
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=5.5e-14 Score=131.43 Aligned_cols=131 Identities=21% Similarity=0.273 Sum_probs=115.2
Q ss_pred CCCCccEEEeecccCcccCccccCCCC-CccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcce
Q psy1672 73 GLLNLQKLFLARCHIGQIDSGALDGLT-NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151 (600)
Q Consensus 73 ~l~~L~~L~L~~n~l~~i~~~~f~~l~-~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~ 151 (600)
.+.+|+.|++++|.++.++ . +..+. +|++|+|++|.|+.+ ..|..+++|++|+|++|.++.+++..|..+++|+.
T Consensus 17 ~~~~L~~L~l~~n~l~~i~-~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPVIE-N-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCCSCC-C-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCchhH-H-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 6889999999999999884 3 45554 999999999999998 36889999999999999999998777789999999
Q ss_pred eeCCCCcCcccCh-hhhcCCCCCCEEEcCCCcCCCCCcc---cccccccccEEEccCCcC
Q psy1672 152 LDMSESRLEHISP-EAFTGAKSLESIKLNGNRLSHFPVR---SVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 152 L~Ls~n~l~~i~~-~~~~~l~~L~~L~Ls~N~l~~l~~~---~~~~l~~L~~L~l~~N~~ 207 (600)
|+|++|.|..++. ..+..+++|+.|++++|.+..++.. .+..+++|+.|++.+|..
T Consensus 93 L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 93 LILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp EECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred EECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 9999999998854 4788999999999999999988754 578889999999998863
No 115
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.48 E-value=1.9e-13 Score=130.03 Aligned_cols=102 Identities=26% Similarity=0.416 Sum_probs=83.3
Q ss_pred cEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCC
Q psy1672 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES 157 (600)
Q Consensus 78 ~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n 157 (600)
+.+++++|+++.++... ..+|++|+|++|.|+.++ ..|..+++|+.|+|++|.|+.+.+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~~ip~~~---~~~l~~L~L~~n~i~~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGI---PRDVTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSCCSCC---CTTCCEEECCSSCCCSCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcCCCCC---CCCCCEEECCCCcCchhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555555555554332 246778888888888777 46888888999999999999888888999999999999999
Q ss_pred cCcccChhhhcCCCCCCEEEcCCCcC
Q psy1672 158 RLEHISPEAFTGAKSLESIKLNGNRL 183 (600)
Q Consensus 158 ~l~~i~~~~~~~l~~L~~L~Ls~N~l 183 (600)
+|+.+.+..|..+++|+.|+|++|.|
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l 114 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDI 114 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCC
Confidence 99999999999999999999999853
No 116
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=8.1e-14 Score=143.83 Aligned_cols=151 Identities=19% Similarity=0.304 Sum_probs=106.3
Q ss_pred ceEEEeeCCCCC--------------------CCChhhhcccC--------CCCccEEEeecccCcccCccccCCCCCcc
Q psy1672 51 TQVLDMSGNNLQ--------------------ILPKEAFRRAG--------LLNLQKLFLARCHIGQIDSGALDGLTNLI 102 (600)
Q Consensus 51 l~~L~Ls~n~L~--------------------~l~~~~f~~~~--------l~~L~~L~L~~n~l~~i~~~~f~~l~~L~ 102 (600)
|++|||++|+|. .|+..+|. + +.+|+.|+|.+ .++.|...+|.++.+|+
T Consensus 51 L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~--~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 51 LKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFS--NVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp CCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTE--EEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred CeEEecCcceeEEecCccccccccccccccccccCHHHhc--ccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 888888888887 56777776 7 88899999988 88888888899999999
Q ss_pred EEEccCCCCCCCCccccCC-------------------------------------------------------------
Q psy1672 103 EIDLSDNLLTSIPSLTFQS------------------------------------------------------------- 121 (600)
Q Consensus 103 ~L~Ls~N~l~~l~~~~f~~------------------------------------------------------------- 121 (600)
.|+|++|.++.+++..|..
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l 207 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFL 207 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEE
T ss_pred eEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceE
Confidence 9999888876666655543
Q ss_pred -----------------CCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCC-EEEcCCCcC
Q psy1672 122 -----------------VRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE-SIKLNGNRL 183 (600)
Q Consensus 122 -----------------l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~-~L~Ls~N~l 183 (600)
+++|+.|+|++|.++.++..+|.++.+|+.|+|.+| ++.|...+|.++.+|+ .|+|.+ .+
T Consensus 208 ~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l 285 (329)
T 3sb4_A 208 TIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SV 285 (329)
T ss_dssp EEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TC
T ss_pred EEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cc
Confidence 345666666666666666666666666666666665 6666666666666666 666665 56
Q ss_pred CCCCcccccccccccEEEccCCc
Q psy1672 184 SHFPVRSVEPLLKLMMIELHDNP 206 (600)
Q Consensus 184 ~~l~~~~~~~l~~L~~L~l~~N~ 206 (600)
+.+....|..+.+|+.+++.+|.
T Consensus 286 ~~I~~~aF~~c~~L~~l~l~~n~ 308 (329)
T 3sb4_A 286 TAIEFGAFMGCDNLRYVLATGDK 308 (329)
T ss_dssp CEECTTTTTTCTTEEEEEECSSC
T ss_pred eEEchhhhhCCccCCEEEeCCCc
Confidence 66666666666666666665554
No 117
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.47 E-value=7.8e-13 Score=142.82 Aligned_cols=158 Identities=18% Similarity=0.236 Sum_probs=103.4
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.++..+..++.+|.. ....+++|++++|.|+.++ +. .+++|++|++++|.++.++ |..+++|++|++++
T Consensus 66 L~~L~Ls~n~l~~~~~~-~l~~L~~L~Ls~N~l~~~~---~~--~l~~L~~L~L~~N~l~~l~---~~~l~~L~~L~l~~ 136 (457)
T 3bz5_A 66 LTKLICTSNNITTLDLS-QNTNLTYLACDSNKLTNLD---VT--PLTKLTYLNCDTNKLTKLD---VSQNPLLTYLNCAR 136 (457)
T ss_dssp CSEEECCSSCCSCCCCT-TCTTCSEEECCSSCCSCCC---CT--TCTTCCEEECCSSCCSCCC---CTTCTTCCEEECTT
T ss_pred CCEEEccCCcCCeEccc-cCCCCCEEECcCCCCceee---cC--CCCcCCEEECCCCcCCeec---CCCCCcCCEEECCC
Confidence 45788888888888733 2334899999999998875 43 7889999999999888874 78888899999998
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCC-CCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCC
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNP-ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~-i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~ 187 (600)
|.|+.++ +..+++|++|++++|. +..+ .+..+++|+.|++++|+++.++ +..+++|+.|++++|.++.++
T Consensus 137 N~l~~l~---l~~l~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~~ 207 (457)
T 3bz5_A 137 NTLTEID---VSHNTQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKLD 207 (457)
T ss_dssp SCCSCCC---CTTCTTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCCC
T ss_pred Cccceec---cccCCcCCEEECCCCCccccc---ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCCeec
Confidence 8888763 5556666666666663 3332 2445555666666666555552 444555555555555555442
Q ss_pred cccccccccccEEEccCCcC
Q psy1672 188 VRSVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 188 ~~~~~~l~~L~~L~l~~N~~ 207 (600)
+..+++|+.|++.+|.+
T Consensus 208 ---l~~l~~L~~L~Ls~N~l 224 (457)
T 3bz5_A 208 ---LNQNIQLTFLDCSSNKL 224 (457)
T ss_dssp ---CTTCTTCSEEECCSSCC
T ss_pred ---cccCCCCCEEECcCCcc
Confidence 33444455555555443
No 118
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.47 E-value=5.7e-14 Score=127.35 Aligned_cols=125 Identities=18% Similarity=0.201 Sum_probs=110.4
Q ss_pred ceEEEeeCCCCC--CCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEE
Q psy1672 51 TQVLDMSGNNLQ--ILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDL 128 (600)
Q Consensus 51 l~~L~Ls~n~L~--~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L 128 (600)
++.|++++|.++ .++. .+. .+++|+.|++++|.++.+ ..|..+++|++|+|++|.++...+..+..+++|++|
T Consensus 19 l~~L~l~~n~l~~~~~~~-~~~--~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEG-LTD--EFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp CSEEECTTCBCBTTBCCS-CCT--TCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CeEEEccCCcCChhHHHH-HHh--hcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 999999999998 7776 343 799999999999999998 568999999999999999999555577779999999
Q ss_pred EccCCCCCccC-cccccCCCCcceeeCCCCcCcccCh---hhhcCCCCCCEEEcCC
Q psy1672 129 NLARNPISKIE-KGAFQFVPGLVKLDMSESRLEHISP---EAFTGAKSLESIKLNG 180 (600)
Q Consensus 129 ~Ls~N~i~~l~-~~~~~~l~~L~~L~Ls~n~l~~i~~---~~~~~l~~L~~L~Ls~ 180 (600)
++++|.++.+. ...+..+++|+.|++++|.++.+.+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999874 3678899999999999999999976 6788999999999864
No 119
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.46 E-value=1.9e-13 Score=142.36 Aligned_cols=152 Identities=19% Similarity=0.217 Sum_probs=132.0
Q ss_pred eEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCC-CCCCccccCCCCCCCE-EE
Q psy1672 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL-TSIPSLTFQSVRFLRD-LN 129 (600)
Q Consensus 52 ~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l-~~l~~~~f~~l~~L~~-L~ 129 (600)
++++.++++|++||..++ .+|+.|+|++|+|+.|++++|.++++|++|+|++|.+ +.++...|.++++|.+ +.
T Consensus 12 ~~v~C~~~~Lt~iP~~l~-----~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDLP-----RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp TEEEEESTTCCSCCTTCC-----TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred CEEEecCCCCCccCcCcC-----CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 468899999999998653 5899999999999999999999999999999999997 4578888999998876 56
Q ss_pred ccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCC-CcCCCCCcccccccc-cccEEEccCCcC
Q psy1672 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNG-NRLSHFPVRSVEPLL-KLMMIELHDNPW 207 (600)
Q Consensus 130 Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~-N~l~~l~~~~~~~l~-~L~~L~l~~N~~ 207 (600)
+..|+++.+.+..|..+++|+.|++++|+|..+++..+....++..|++.+ +.+..++...|..+. .++.|++.+|.+
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 678999999999999999999999999999999887777777888888854 688888877777765 578899999875
Q ss_pred c
Q psy1672 208 V 208 (600)
Q Consensus 208 ~ 208 (600)
.
T Consensus 167 ~ 167 (350)
T 4ay9_X 167 Q 167 (350)
T ss_dssp C
T ss_pred c
Confidence 4
No 120
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.45 E-value=1.1e-12 Score=146.57 Aligned_cols=77 Identities=23% Similarity=0.315 Sum_probs=47.0
Q ss_pred CCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEc
Q psy1672 123 RFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202 (600)
Q Consensus 123 ~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l 202 (600)
++|+.|+|++|.++.++ ..+++|+.|+|++|.|+.++. .+++|+.|+|++|.|+.++ ..+..+++|+.|++
T Consensus 221 ~~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~~lp-~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTSLP----VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLTRLP-ESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCCSCC-GGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCcCC----CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCCcCC-HHHhhccccCEEEe
Confidence 45556666666655543 234566666666666666543 4566666777777666665 34666666777777
Q ss_pred cCCcCc
Q psy1672 203 HDNPWV 208 (600)
Q Consensus 203 ~~N~~~ 208 (600)
.+|++.
T Consensus 292 ~~N~l~ 297 (622)
T 3g06_A 292 EGNPLS 297 (622)
T ss_dssp CSCCCC
T ss_pred cCCCCC
Confidence 777654
No 121
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.42 E-value=2.7e-12 Score=138.43 Aligned_cols=137 Identities=23% Similarity=0.331 Sum_probs=75.3
Q ss_pred eEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCC
Q psy1672 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N 109 (600)
+.+++.+.+++.+|... .. +++|++++|.++.+|.. +.+|+.|++++|.++.++.. .++|++|+|++|
T Consensus 74 ~~L~l~~~~l~~lp~~~-~~-L~~L~l~~n~l~~lp~~------~~~L~~L~l~~n~l~~l~~~----~~~L~~L~L~~n 141 (454)
T 1jl5_A 74 HELELNNLGLSSLPELP-PH-LESLVASCNSLTELPEL------PQSLKSLLVDNNNLKALSDL----PPLLEYLGVSNN 141 (454)
T ss_dssp SEEECTTSCCSCCCSCC-TT-CSEEECCSSCCSSCCCC------CTTCCEEECCSSCCSCCCSC----CTTCCEEECCSS
T ss_pred CEEEecCCccccCCCCc-CC-CCEEEccCCcCCccccc------cCCCcEEECCCCccCcccCC----CCCCCEEECcCC
Confidence 56888888888887743 33 88888888888777632 34555555555555544321 135555555555
Q ss_pred CCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCC
Q psy1672 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186 (600)
Q Consensus 110 ~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l 186 (600)
.++.++ .|..+++|++|++++|.++.++.. ..+|+.|++++|.++.++ .+.++++|+.|++++|.+..+
T Consensus 142 ~l~~lp--~~~~l~~L~~L~l~~N~l~~lp~~----~~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~l 210 (454)
T 1jl5_A 142 QLEKLP--ELQNSSFLKIIDVDNNSLKKLPDL----PPSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKKL 210 (454)
T ss_dssp CCSSCC--CCTTCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSC
T ss_pred CCCCCc--ccCCCCCCCEEECCCCcCcccCCC----cccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCcC
Confidence 555544 255555555555555555544221 134555555555555542 244455555555555544443
No 122
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=99.42 E-value=2.1e-13 Score=120.90 Aligned_cols=55 Identities=29% Similarity=0.722 Sum_probs=46.2
Q ss_pred EEccCCcCccccccccchhhhcccCCC--CCCCCCCCCccccccccccccccccCcc
Q psy1672 200 IELHDNPWVCDCNMRSIKMWLADKKNV--PVQPACTGPERLSGKVFSDLHADDFACK 254 (600)
Q Consensus 200 L~l~~N~~~C~C~l~~l~~w~~~~~~~--~~~~~C~~p~~l~g~~l~~l~~~~~~C~ 254 (600)
|+|.+|||.|||++.||..|+...... ...+.|..|..++|+.+.++..++|.|.
T Consensus 60 L~L~~NP~~CdC~l~~l~~wl~~~~~~~~~~~~~C~~P~~l~g~~l~~l~~~~l~c~ 116 (130)
T 3rfe_A 60 AHLGANPWRCDCRLVPLRAWLAGRPERAPYRDLRCVAPPALRGRLLPYLAEDELRAA 116 (130)
T ss_dssp EECCSSCCBCSGGGHHHHHHHHTSSCSGGGTTCBCCBSTTTTTCBGGGCCHHHHHHT
T ss_pred EEecCCCeeccCccHHHHHHHHhCcccccccCcEeCcChHHcCCCcccCCHHHhhCc
Confidence 478899999999999999999855332 2567999999999999999998888653
No 123
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=3.8e-13 Score=138.76 Aligned_cols=103 Identities=22% Similarity=0.388 Sum_probs=97.9
Q ss_pred CCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcc-eeeCCCCcCcccChhhhcCCCCCCEE
Q psy1672 98 LTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLV-KLDMSESRLEHISPEAFTGAKSLESI 176 (600)
Q Consensus 98 l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~-~L~Ls~n~l~~i~~~~~~~l~~L~~L 176 (600)
+++|+.|+|++|+++.|+...|.++.+|+.|+|.+| ++.+...+|.++.+|+ .+++.+ .++.|...+|.++.+|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 578999999999999999999999999999999998 9999999999999999 999998 8999999999999999999
Q ss_pred EcCCCcCCCCCcccccccccccEEEc
Q psy1672 177 KLNGNRLSHFPVRSVEPLLKLMMIEL 202 (600)
Q Consensus 177 ~Ls~N~l~~l~~~~~~~l~~L~~L~l 202 (600)
++++|.++.++...|..+++|+.+..
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99999999999999999999998863
No 124
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.40 E-value=1e-12 Score=110.86 Aligned_cols=93 Identities=18% Similarity=0.373 Sum_probs=76.5
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+..+.+.+|+.+.|.|.+.|.|.|.|.|+++|+.+.... ..++.+...+. .+.|.|.+++.+|.|.|
T Consensus 6 P~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~----~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y 78 (100)
T 3knb_A 6 PKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE----QGRFHIENTDD---LTTLIIMDVQKQDGGLY 78 (100)
T ss_dssp EEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG----GGTEEEEECSS---EEEEEESSCCGGGCEEE
T ss_pred CEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeec----cceeeeecccc---eEEEEEcCCCccCCEEE
Confidence 455555677888999999999999999999999999999886543 23454444432 35799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~ 354 (600)
+|.|+|..|.++..+.|.|.
T Consensus 79 ~C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 79 TLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECCCEEEEEEEEEEE
Confidence 99999999999998888874
No 125
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.40 E-value=5e-12 Score=136.37 Aligned_cols=158 Identities=23% Similarity=0.264 Sum_probs=117.8
Q ss_pred ceEEEccCCCCCccCCCCCCCCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 29 KQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 29 ~~~v~C~~~~L~~ip~~~~~~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
-+.++..+..++.+|... ..+++|++++|.++.++.. ..+|++|++++|.++.++ .|.++++|++|++++
T Consensus 93 L~~L~l~~n~l~~lp~~~--~~L~~L~l~~n~l~~l~~~------~~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~~ 162 (454)
T 1jl5_A 93 LESLVASCNSLTELPELP--QSLKSLLVDNNNLKALSDL------PPLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVDN 162 (454)
T ss_dssp CSEEECCSSCCSSCCCCC--TTCCEEECCSSCCSCCCSC------CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECCS
T ss_pred CCEEEccCCcCCcccccc--CCCcEEECCCCccCcccCC------CCCCCEEECcCCCCCCCc--ccCCCCCCCEEECCC
Confidence 457788888888888654 2388888888888877631 258888888888888875 388888888888888
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV 188 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 188 (600)
|.++.++.. ..+|++|++++|.++.++ .|..+++|+.|++++|.+..++. ...+|+.|++++|.+..++
T Consensus 163 N~l~~lp~~----~~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~n~l~~lp- 231 (454)
T 1jl5_A 163 NSLKKLPDL----PPSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKKLPD----LPLSLESIVAGNNILEELP- 231 (454)
T ss_dssp SCCSCCCCC----CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSSCC-
T ss_pred CcCcccCCC----cccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCcCCC----CcCcccEEECcCCcCCccc-
Confidence 888877652 347888888888888764 47778888888888888877643 1257777888888777766
Q ss_pred ccccccccccEEEccCCcCc
Q psy1672 189 RSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 189 ~~~~~l~~L~~L~l~~N~~~ 208 (600)
.+..+++|+.|++++|.+.
T Consensus 232 -~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 232 -ELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCS
T ss_pred -ccCCCCCCCEEECCCCcCC
Confidence 2667777777777777654
No 126
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.39 E-value=8.5e-14 Score=158.82 Aligned_cols=152 Identities=18% Similarity=0.193 Sum_probs=98.4
Q ss_pred ceEEEeeCCCCCC---------CChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCC
Q psy1672 51 TQVLDMSGNNLQI---------LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQS 121 (600)
Q Consensus 51 l~~L~Ls~n~L~~---------l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~ 121 (600)
++.++|+.|.|.. ++...|. .+.+|+.|+|++|.+..++...| .+++|++|+|++|.|+.++. .|..
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~--~l~~L~~L~Ls~n~l~~l~~~~~-~l~~L~~L~Ls~N~l~~lp~-~~~~ 268 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKY--DDQLWHALDLSNLQIFNISANIF-KYDFLTRLYLNGNSLTELPA-EIKN 268 (727)
T ss_dssp -------------------------------CCCCCCEEECTTSCCSCCCGGGG-GCCSCSCCBCTTSCCSCCCG-GGGG
T ss_pred hhcCccCcccccCccccccceecChhhhc--cCCCCcEEECCCCCCCCCChhhc-CCCCCCEEEeeCCcCcccCh-hhhC
Confidence 5556666655543 2344454 68888888888888888766644 78888888888888887775 5778
Q ss_pred CCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccc-cccEE
Q psy1672 122 VRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL-KLMMI 200 (600)
Q Consensus 122 l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~-~L~~L 200 (600)
+++|++|+|++|.|+.+ +..|..+++|+.|+|++|.|..++. .|..+++|+.|+|++|.|....+..+..+. .+..+
T Consensus 269 l~~L~~L~Ls~N~l~~l-p~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l 346 (727)
T 4b8c_D 269 LSNLRVLDLSHNRLTSL-PAELGSCFQLKYFYFFDNMVTTLPW-EFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIF 346 (727)
T ss_dssp GTTCCEEECTTSCCSSC-CSSGGGGTTCSEEECCSSCCCCCCS-STTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEeCcCCcCCcc-ChhhcCCCCCCEEECCCCCCCccCh-hhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHH
Confidence 88888888888888876 4557788888888888888887744 488888888888888888866555443322 11224
Q ss_pred EccCCcCc
Q psy1672 201 ELHDNPWV 208 (600)
Q Consensus 201 ~l~~N~~~ 208 (600)
++.+|.+.
T Consensus 347 ~l~~N~l~ 354 (727)
T 4b8c_D 347 YLRDNRPE 354 (727)
T ss_dssp HHHHCCCC
T ss_pred hhccCccc
Confidence 45555543
No 127
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.38 E-value=9.1e-13 Score=112.64 Aligned_cols=94 Identities=31% Similarity=0.413 Sum_probs=77.7
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..|.+...+..+.+.+|+.+.|.|.+.|.|.|.|.|+++|+.+.... ++.+..++ ....|.|.+++.+|.|
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~------~~~~~~~~---~~~~L~I~~v~~~D~G 82 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE------RLSFPADG---AEHGLLLTAALPTDAG 82 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS------SEECCEET---TEEEEEESSCCGGGCE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECccccccee------eEEEeecC---ceEEEEEecCChhhCE
Confidence 35666667778889999999999999999999999999999886543 33333333 2347999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEE
Q psy1672 333 RFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
.|+|+|.|..|..+..+.|.|..
T Consensus 83 ~Y~C~a~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 83 VYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEECCCEEEEEEEEEEEc
Confidence 99999999999999998888854
No 128
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.36 E-value=8.1e-13 Score=150.72 Aligned_cols=151 Identities=18% Similarity=0.228 Sum_probs=99.8
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEE-----EeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCC
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKL-----FLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFL 125 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L-----~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L 125 (600)
++.|+|.+|.+..++...+. ...|..+ ++..|.+. +.+..|..+.+|+.|+|++|.|..++...| .+++|
T Consensus 175 ~~~l~L~~n~~~~~~~~~l~---~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~-~l~~L 249 (727)
T 4b8c_D 175 TPKIELFANGKDEANQALLQ---HKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISANIF-KYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCSCCCGGGG-GCCSC
T ss_pred cceEEeeCCCCCcchhhHhh---cCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCCCCChhhc-CCCCC
Confidence 78899999999887665543 2333333 33334444 456779999999999999999999998655 78999
Q ss_pred CEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCC
Q psy1672 126 RDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205 (600)
Q Consensus 126 ~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N 205 (600)
++|+|++|.|+.++ ..|..+++|+.|+|++|.|+.+ +..|..+.+|+.|+|++|.|..++.. |..+++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~~lp-~~~~~l~~L~~L~Ls~N~l~~l-p~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLTELP-AEIKNLSNLRVLDLSHNRLTSL-PAELGSCFQLKYFYFFDNMVTTLPWE-FGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCSCCC-GGGGGGTTCCEEECTTSCCSSC-CSSGGGGTTCSEEECCSSCCCCCCSS-TTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCcccC-hhhhCCCCCCEEeCcCCcCCcc-ChhhcCCCCCCEEECCCCCCCccChh-hhcCCCccEEeCCCC
Confidence 99999999999774 5689999999999999999988 66789999999999999999999865 899999999999999
Q ss_pred cCcc
Q psy1672 206 PWVC 209 (600)
Q Consensus 206 ~~~C 209 (600)
++..
T Consensus 327 ~l~~ 330 (727)
T 4b8c_D 327 PLEK 330 (727)
T ss_dssp CCCS
T ss_pred ccCC
Confidence 9864
No 129
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.34 E-value=4.2e-13 Score=140.38 Aligned_cols=156 Identities=22% Similarity=0.298 Sum_probs=103.5
Q ss_pred ceEEEeeCCCCCCCCh----hhhcccCCC-CccEEEeecccCcccCccccCCC-----CCccEEEccCCCCCCCCccc--
Q psy1672 51 TQVLDMSGNNLQILPK----EAFRRAGLL-NLQKLFLARCHIGQIDSGALDGL-----TNLIEIDLSDNLLTSIPSLT-- 118 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~----~~f~~~~l~-~L~~L~L~~n~l~~i~~~~f~~l-----~~L~~L~Ls~N~l~~l~~~~-- 118 (600)
+++|+|++|.|+.++. ..|. .++ +|+.|+|++|.++......|..+ ++|++|+|++|.|+......
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~--~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFA--NTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHH--TCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHH--hCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 7788888888777766 4554 566 78888888887777766555554 77888888888777665542
Q ss_pred --cCCC-CCCCEEEccCCCCCccCccccc----C-CCCcceeeCCCCcCcccChhh----hcCCC-CCCEEEcCCCcCCC
Q psy1672 119 --FQSV-RFLRDLNLARNPISKIEKGAFQ----F-VPGLVKLDMSESRLEHISPEA----FTGAK-SLESIKLNGNRLSH 185 (600)
Q Consensus 119 --f~~l-~~L~~L~Ls~N~i~~l~~~~~~----~-l~~L~~L~Ls~n~l~~i~~~~----~~~l~-~L~~L~Ls~N~l~~ 185 (600)
+..+ ++|++|+|++|.++......+. . ..+|+.|+|++|.+....... +..++ +|+.|+|++|.++.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 3333 6788888888877766554332 2 257788888888777544333 33444 77888888887776
Q ss_pred CCccccc----cc-ccccEEEccCCcCc
Q psy1672 186 FPVRSVE----PL-LKLMMIELHDNPWV 208 (600)
Q Consensus 186 l~~~~~~----~l-~~L~~L~l~~N~~~ 208 (600)
.....+. .+ .+|+.|++++|.+.
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~ 209 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLG 209 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCC
Confidence 6643333 23 47777887777654
No 130
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.29 E-value=7.2e-12 Score=138.71 Aligned_cols=105 Identities=19% Similarity=0.323 Sum_probs=81.1
Q ss_pred CccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcC
Q psy1672 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLN 179 (600)
Q Consensus 100 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls 179 (600)
.|+.|+|++|.|+.++. |..+++|+.|+|++|.|+.++ ..|..+++|+.|+|++|.|+.++ .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~lp~--~~~l~~L~~L~Ls~N~l~~lp-~~~~~l~~L~~L~Ls~N~l~~lp--~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALP-PALAALRCLEVLQASDNALENVD--GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCCCCC-GGGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCCCcC--ccccccCcEeecCcccccccc-hhhhcCCCCCEEECCCCCCCCCc--ccCCCCCCcEEECC
Confidence 47788888888888764 777788888888888888663 46777888888888888888763 67778888888888
Q ss_pred CCcCCCCC-cccccccccccEEEccCCcCcc
Q psy1672 180 GNRLSHFP-VRSVEPLLKLMMIELHDNPWVC 209 (600)
Q Consensus 180 ~N~l~~l~-~~~~~~l~~L~~L~l~~N~~~C 209 (600)
+|.|+.+. +..+..+++|+.|++++|++..
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 88888775 5677778888888888887654
No 131
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.29 E-value=7.3e-12 Score=138.66 Aligned_cols=123 Identities=23% Similarity=0.321 Sum_probs=107.8
Q ss_pred CCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeC
Q psy1672 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154 (600)
Q Consensus 75 ~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~L 154 (600)
..|+.|+|++|.|+.++. |..+++|+.|+|++|.|+.+|. .|..+++|+.|+|++|.|+.++ .|..+++|+.|+|
T Consensus 441 ~~L~~L~Ls~n~l~~lp~--~~~l~~L~~L~Ls~N~l~~lp~-~~~~l~~L~~L~Ls~N~l~~lp--~l~~l~~L~~L~L 515 (567)
T 1dce_A 441 ADVRVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVD--GVANLPRLQELLL 515 (567)
T ss_dssp TTCSEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCCCCCG-GGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEEC
T ss_pred cCceEEEecCCCCCCCcC--ccccccCcEeecCcccccccch-hhhcCCCCCEEECCCCCCCCCc--ccCCCCCCcEEEC
Confidence 368999999999999864 8999999999999999999887 7889999999999999999975 6889999999999
Q ss_pred CCCcCcccC-hhhhcCCCCCCEEEcCCCcCCCCCcc---cccccccccEEEc
Q psy1672 155 SESRLEHIS-PEAFTGAKSLESIKLNGNRLSHFPVR---SVEPLLKLMMIEL 202 (600)
Q Consensus 155 s~n~l~~i~-~~~~~~l~~L~~L~Ls~N~l~~l~~~---~~~~l~~L~~L~l 202 (600)
++|+|+.+. +..+..+++|+.|+|++|.|+.++.. .+..+++|+.|++
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999999997 88899999999999999999988643 2344678888764
No 132
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.28 E-value=5.7e-14 Score=133.98 Aligned_cols=147 Identities=22% Similarity=0.311 Sum_probs=114.0
Q ss_pred ceEEEeeCC--CCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEE
Q psy1672 51 TQVLDMSGN--NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDL 128 (600)
Q Consensus 51 l~~L~Ls~n--~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L 128 (600)
++.+.+.+. .++.++.. |. .+.+|+.|+|++|.++.++ .|..+++|++|+|++|.|+.++. .+..+++|++|
T Consensus 25 l~~~~l~~~~~~l~~l~~~-~~--~l~~L~~L~ls~n~l~~l~--~~~~l~~L~~L~l~~n~l~~l~~-~~~~~~~L~~L 98 (198)
T 1ds9_A 25 AEKVELHGMIPPIEKMDAT-LS--TLKACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIKKIEN-LDAVADTLEEL 98 (198)
T ss_dssp CSEEECCBCCTTCCCCHHH-HH--HTTTCSEEECSEEEESCCC--CHHHHTTCCEEEEEEEEECSCSS-HHHHHHHCSEE
T ss_pred hheeEeccccCcHhhhhHH-Hh--cCCCCCEEECCCCCCcccc--ccccCCCCCEEECCCCCcccccc-hhhcCCcCCEE
Confidence 566666654 56666654 33 6889999999999998876 68889999999999999998876 56667889999
Q ss_pred EccCCCCCccCcccccCCCCcceeeCCCCcCcccCh-hhhcCCCCCCEEEcCCCcCCCCCcc----------cccccccc
Q psy1672 129 NLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISP-EAFTGAKSLESIKLNGNRLSHFPVR----------SVEPLLKL 197 (600)
Q Consensus 129 ~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~-~~~~~l~~L~~L~Ls~N~l~~l~~~----------~~~~l~~L 197 (600)
+|++|.++.++ .+..+++|+.|++++|++..+.. ..+..+++|+.|++++|.+....+. .+..+++|
T Consensus 99 ~L~~N~l~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L 176 (198)
T 1ds9_A 99 WISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNL 176 (198)
T ss_dssp EEEEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSC
T ss_pred ECcCCcCCcCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCc
Confidence 99999998874 47788899999999999988754 5678889999999999988655322 36677788
Q ss_pred cEEEccCCcC
Q psy1672 198 MMIELHDNPW 207 (600)
Q Consensus 198 ~~L~l~~N~~ 207 (600)
+.|+ +|++
T Consensus 177 ~~Ld--~~~i 184 (198)
T 1ds9_A 177 KKLD--GMPV 184 (198)
T ss_dssp SEEC--CGGG
T ss_pred EEEC--Cccc
Confidence 8775 5553
No 133
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.27 E-value=1.2e-12 Score=134.95 Aligned_cols=152 Identities=18% Similarity=0.179 Sum_probs=77.1
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCccc-CccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEE
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQI-DSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLN 129 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i-~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 129 (600)
++.|++++|.+.......+ .+.+|+.|+|++|.+... .+..+..+++|++|+|++|.++......+..+++|++|+
T Consensus 72 l~~L~l~~n~l~~~~~~~~---~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 72 VIAFRCPRSFMDQPLAEHF---SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp CSEEECTTCEECSCCCSCC---CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ceEEEcCCccccccchhhc---cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5566666666555544443 355666666666655432 233455556666666666655533333445555666666
Q ss_pred ccCC-CCCcc-CcccccCCCCcceeeCCCC-cCccc-ChhhhcCCC-CCCEEEcCCCc--CC--CCCcccccccccccEE
Q psy1672 130 LARN-PISKI-EKGAFQFVPGLVKLDMSES-RLEHI-SPEAFTGAK-SLESIKLNGNR--LS--HFPVRSVEPLLKLMMI 200 (600)
Q Consensus 130 Ls~N-~i~~l-~~~~~~~l~~L~~L~Ls~n-~l~~i-~~~~~~~l~-~L~~L~Ls~N~--l~--~l~~~~~~~l~~L~~L 200 (600)
|++| .++.. .+..+..+++|+.|++++| .++.. .+..+..++ +|+.|+|++|. ++ .++ ..+..+++|+.|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~-~~~~~~~~L~~L 227 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLS-TLVRRCPNLVHL 227 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHH-HHHHHCTTCSEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHH-HHHhhCCCCCEE
Confidence 6655 34421 1223445555666666655 55542 133344555 55666665552 22 111 233445555555
Q ss_pred EccCCc
Q psy1672 201 ELHDNP 206 (600)
Q Consensus 201 ~l~~N~ 206 (600)
++.+|.
T Consensus 228 ~l~~~~ 233 (336)
T 2ast_B 228 DLSDSV 233 (336)
T ss_dssp ECTTCT
T ss_pred eCCCCC
Confidence 555554
No 134
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.24 E-value=5.1e-11 Score=102.45 Aligned_cols=97 Identities=18% Similarity=0.250 Sum_probs=78.3
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..|.+...+..+.+..|+.+.|.|.+.|.|.+.+.|++++..+.... ++.+...+ ..+.|.|.+++..|.|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~------~~~~~~~~---~~~~L~I~~v~~~D~G 76 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESE------HMKVENSE---NGSKLTILAARQEHCG 76 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSS------SEEEEECS---SEEEEEETTCCTTTCE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCC------CEEEEEcC---CEEEEEECCCChhcCE
Confidence 45666666777889999999999999999999999999998775432 33333222 2458999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEccC
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYRGV 358 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~~~ 358 (600)
.|+|.|.|..|.....+.|.|...+.
T Consensus 77 ~Y~C~a~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 77 CYTLLVENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp EEEEEEECSSCEEECCEEEEEECSCS
T ss_pred EEEEEEEECCCcEEEEEEEEEECCCC
Confidence 99999999999998889999876543
No 135
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.23 E-value=3.9e-11 Score=100.96 Aligned_cols=95 Identities=27% Similarity=0.403 Sum_probs=76.9
Q ss_pred CcccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 252 ACKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 252 ~C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
.+.|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.... +..+..++ ....|.|.+++..|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~------~~~~~~~~---~~~~L~i~~~~~~D~ 76 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESS------KIHYTNTS---GVLTLEILDCHTDDS 76 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCS------SEEEEEET---TEEEEEECSCCGGGC
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCC------CEEEEECC---CEEEEEEcCCCcccC
Confidence 356666666777888999999999999999999999999998876543 23333222 134799999999999
Q ss_pred eEEEEEEecCCCceeEEEEEEEEE
Q psy1672 332 GRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
|.|+|.|.|..|..+..+.|.|..
T Consensus 77 G~Y~C~a~N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 77 GTYRAVCTNYKGEASDYATLDVTG 100 (103)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEC
Confidence 999999999999999888888853
No 136
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.23 E-value=4e-11 Score=100.24 Aligned_cols=94 Identities=29% Similarity=0.499 Sum_probs=74.4
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.++|.|.+.|.|.+.+.|+++++.+..... .+.....++ ...|.|.+++..|.|.
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~----~~~~~~~~~----~~~L~i~~v~~~D~G~ 76 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDL----HKMIVSEKG----LHSLIFEVVRASDAGA 76 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSS----SCEEEETTT----EEEEEESSCCGGGCEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCc----EEEEEcCCC----eEEEEECCCCcccCEE
Confidence 34555556677889999999999999999999999999988765431 122222222 2479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
|+|.|.|..|..+..+.|.|..
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 77 YACVAKNRAGEATFTVQLDVLA 98 (100)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEcCCCeEEEEEEEEEEe
Confidence 9999999999999999988854
No 137
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.22 E-value=3.9e-12 Score=132.97 Aligned_cols=154 Identities=18% Similarity=0.151 Sum_probs=124.9
Q ss_pred EEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCc----cccCCCC-CccEEEccCCCCCCCCccccCCC-----
Q psy1672 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS----GALDGLT-NLIEIDLSDNLLTSIPSLTFQSV----- 122 (600)
Q Consensus 53 ~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~----~~f~~l~-~L~~L~Ls~N~l~~l~~~~f~~l----- 122 (600)
.+.++.|.++...+..+. ...+|+.|+|++|.++.+.. .+|..++ +|++|+|++|.|+......|..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~--~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 79 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTS--IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIP 79 (362)
T ss_dssp EEECCCCTTCCHHHHHHT--SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred ccccccccchHHHHHHHh--CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccC
Confidence 367889999977666664 55669999999999999987 7888999 99999999999998876666654
Q ss_pred CCCCEEEccCCCCCccCccc----ccCC-CCcceeeCCCCcCcccChhhhc----C-CCCCCEEEcCCCcCCCCCcccc-
Q psy1672 123 RFLRDLNLARNPISKIEKGA----FQFV-PGLVKLDMSESRLEHISPEAFT----G-AKSLESIKLNGNRLSHFPVRSV- 191 (600)
Q Consensus 123 ~~L~~L~Ls~N~i~~l~~~~----~~~l-~~L~~L~Ls~n~l~~i~~~~~~----~-l~~L~~L~Ls~N~l~~l~~~~~- 191 (600)
++|++|+|++|.++...... +..+ ++|+.|+|++|.+.......+. . ..+|+.|+|++|.+.......+
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 89999999999998776553 3444 8999999999999998776543 3 3699999999999997654333
Q ss_pred ---cccc-cccEEEccCCcCc
Q psy1672 192 ---EPLL-KLMMIELHDNPWV 208 (600)
Q Consensus 192 ---~~l~-~L~~L~l~~N~~~ 208 (600)
..++ +|+.|++.+|.+.
T Consensus 160 ~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 160 QILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGG
T ss_pred HHHhcCCccccEeeecCCCCc
Confidence 3344 8999999999865
No 138
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.22 E-value=1.8e-12 Score=136.58 Aligned_cols=157 Identities=20% Similarity=0.226 Sum_probs=103.6
Q ss_pred CceEEEeeCCCCCC-----CChhhhcccCCCCccEEEeecccCcccCccccC----CC---------CCccEEEccCCCC
Q psy1672 50 LTQVLDMSGNNLQI-----LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD----GL---------TNLIEIDLSDNLL 111 (600)
Q Consensus 50 ~l~~L~Ls~n~L~~-----l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~----~l---------~~L~~L~Ls~N~l 111 (600)
.+++|+|++|.|.. ++.. +. .+++|++|+|++|.++......|. .+ ++|++|+|++|.|
T Consensus 95 ~L~~L~Ls~n~l~~~~~~~l~~~-l~--~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 95 KLHTVRLSDNAFGPTAQEPLIDF-LS--KHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRL 171 (386)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHH-HH--HCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCC
T ss_pred cccEEECCCCcCCHHHHHHHHHH-HH--hCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCC
Confidence 48888888888876 3333 33 578888888888888644333333 23 7888888888887
Q ss_pred CC--CCc--cccCCCCCCCEEEccCCCCCc-----cCcccccCCCCcceeeCCCCcCc----ccChhhhcCCCCCCEEEc
Q psy1672 112 TS--IPS--LTFQSVRFLRDLNLARNPISK-----IEKGAFQFVPGLVKLDMSESRLE----HISPEAFTGAKSLESIKL 178 (600)
Q Consensus 112 ~~--l~~--~~f~~l~~L~~L~Ls~N~i~~-----l~~~~~~~l~~L~~L~Ls~n~l~----~i~~~~~~~l~~L~~L~L 178 (600)
+. ++. ..|..+++|+.|+|++|.++. +.+..+..+++|+.|+|++|.+. ...+..+..+++|+.|+|
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L 251 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 251 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEEC
Confidence 62 221 245566778888888887762 22335667778888888888874 222456677788888888
Q ss_pred CCCcCCCCCc----cccc--ccccccEEEccCCcCcc
Q psy1672 179 NGNRLSHFPV----RSVE--PLLKLMMIELHDNPWVC 209 (600)
Q Consensus 179 s~N~l~~l~~----~~~~--~l~~L~~L~l~~N~~~C 209 (600)
++|.+..... ..+. .+++|+.|++.+|.+..
T Consensus 252 ~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp TTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 8887765421 2232 26777888888777543
No 139
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.20 E-value=7.2e-11 Score=98.45 Aligned_cols=91 Identities=25% Similarity=0.306 Sum_probs=73.0
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEe--eCCceeeeeeEEEecCCCCCC
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI--EQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~--~~g~~~~~s~L~I~~v~~~d~ 331 (600)
.|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... +..+. ..+ ...|.|.+++..|+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~------~~~~~~~~~~----~~~L~i~~v~~~D~ 74 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSD------RIYWYWPEDN----VCELVIRDVTGEDS 74 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS------SEEEEEEETT----EEEEEECSCCGGGC
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCC------CEEEEEcCCC----EEEEEECCCCcCCC
Confidence 3455555667788999999999999999999999999998876433 22221 222 34799999999999
Q ss_pred eEEEEEEecCCCceeEEEEEEEE
Q psy1672 332 GRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|.|+|.|.|..|.....+.|.|.
T Consensus 75 G~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 75 ASIMVKAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEECCCcEEEEEEEEEe
Confidence 99999999999999988888874
No 140
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.20 E-value=4.8e-11 Score=98.57 Aligned_cols=88 Identities=19% Similarity=0.282 Sum_probs=69.7
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcC--eeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+...+..+.+..|+.+.|.|.+.|.|.|.+.|++++ ..+.... +.. ... ..+.|.|.+++..|+|
T Consensus 3 P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~------~~~-~~~----~~~~L~i~~~~~~D~G 71 (93)
T 1wit_A 3 PKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL------LVD-AKS----STTSIFFPSAKRADSG 71 (93)
T ss_dssp CEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS------EEE-EET----TEEEEECTTBCGGGCE
T ss_pred CeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE------EEE-ecC----CEEEEEECCCChhcCE
Confidence 44444456778899999999999999999999999988 7664321 111 111 2357999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEE
Q psy1672 333 RFYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V 353 (600)
.|+|.|.|..|.++..+.|.|
T Consensus 72 ~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 72 NYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEcCCCeEEEEEEEEE
Confidence 999999999999888888876
No 141
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.19 E-value=6.2e-11 Score=100.28 Aligned_cols=86 Identities=20% Similarity=0.339 Sum_probs=67.5
Q ss_pred cccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCcee
Q psy1672 267 VSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIAD 346 (600)
Q Consensus 267 ~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 346 (600)
..+..+.+.|.+.|.|.|++.|+++|+.+.... .....+...+.....+.|.|.+++.+|+|.|+|+|+|..|.++
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~----~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~ 89 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESK----YICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDE 89 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCS----SEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCC----cEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEe
Confidence 356788999999999999999999999886543 1112222223333456799999999999999999999999999
Q ss_pred EEEEEEEEEc
Q psy1672 347 ANFTLQVTYR 356 (600)
Q Consensus 347 ~~v~L~V~~~ 356 (600)
.++.|.|...
T Consensus 90 ~~~~l~V~~~ 99 (103)
T 1wwb_X 90 KQISAHFMGW 99 (103)
T ss_dssp EEEEECCSCC
T ss_pred EEEEEEECCC
Confidence 9998888543
No 142
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.19 E-value=1.4e-10 Score=122.83 Aligned_cols=167 Identities=19% Similarity=0.268 Sum_probs=136.1
Q ss_pred eEEEccCCCCCccCCCCCC--CCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEcc
Q psy1672 30 QWMECRDKFLITIPEAPES--ELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~--~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls 107 (600)
..+...+ .++.|...... ..|+.|+|.+|+++.|+..+|. +.+|+.|.|.+ .++.|...+|.++.+|+.|+|.
T Consensus 160 ~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~---~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 160 QEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV---YAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT---TCCCSEEECCT-TCCEECTTTTTTCTTCCCEECC
T ss_pred eEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe---ecccCEEEeCC-chheehhhHhhCCCCCCEEecC
Confidence 3455443 67777754433 4599999999999999999995 68999999985 4889999999999999999998
Q ss_pred CCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCc-----ccChhhhcCCCCCCEEEcCCCc
Q psy1672 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLE-----HISPEAFTGAKSLESIKLNGNR 182 (600)
Q Consensus 108 ~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~-----~i~~~~~~~l~~L~~L~Ls~N~ 182 (600)
.| ++.|...+|.+ .+|+.+.| .+.++.+...+|.++.+|+.+.+.+|.+. .|...+|.++.+|+.++|. +.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~ 310 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ES 310 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TT
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cc
Confidence 64 78888888888 67999988 45588888888999999999988887665 6888888889999999988 45
Q ss_pred CCCCCcccccccccccEEEccCC
Q psy1672 183 LSHFPVRSVEPLLKLMMIELHDN 205 (600)
Q Consensus 183 l~~l~~~~~~~l~~L~~L~l~~N 205 (600)
+..+....|..+.+|+.+.+..|
T Consensus 311 i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 311 IRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp CCEECTTTTTTCCSCCEEEECTT
T ss_pred eEEEhhhhhcCCCCccEEEECcc
Confidence 88888888888888888888655
No 143
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.18 E-value=4.1e-12 Score=133.91 Aligned_cols=176 Identities=16% Similarity=0.137 Sum_probs=122.9
Q ss_pred eEEEccCCCCCcc-----CC-CCCCCCceEEEeeCCCCCCC----Chhh------hcccCCCCccEEEeecccCccc---
Q psy1672 30 QWMECRDKFLITI-----PE-APESELTQVLDMSGNNLQIL----PKEA------FRRAGLLNLQKLFLARCHIGQI--- 90 (600)
Q Consensus 30 ~~v~C~~~~L~~i-----p~-~~~~~~l~~L~Ls~n~L~~l----~~~~------f~~~~l~~L~~L~L~~n~l~~i--- 90 (600)
+.++..+..+... +. ......+++|+|++|.+..+ |... +. .+++|++|+|++|.++..
T Consensus 35 ~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~--~~~~L~~L~Ls~n~l~~~~~~ 112 (386)
T 2ca6_A 35 KEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALL--KCPKLHTVRLSDNAFGPTAQE 112 (386)
T ss_dssp CEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHT--TCTTCCEEECCSCCCCTTTHH
T ss_pred cEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHh--hCCcccEEECCCCcCCHHHHH
Confidence 4566666655442 11 11123489999999876644 3322 22 688999999999988772
Q ss_pred -CccccCCCCCccEEEccCCCCCCCCccccC----CC---------CCCCEEEccCCCCCccC-c---ccccCCCCccee
Q psy1672 91 -DSGALDGLTNLIEIDLSDNLLTSIPSLTFQ----SV---------RFLRDLNLARNPISKIE-K---GAFQFVPGLVKL 152 (600)
Q Consensus 91 -~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~----~l---------~~L~~L~Ls~N~i~~l~-~---~~~~~l~~L~~L 152 (600)
.+..|..+++|++|+|++|.|+......+. .+ ++|++|+|++|.++... + ..|..+++|+.|
T Consensus 113 ~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L 192 (386)
T 2ca6_A 113 PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTV 192 (386)
T ss_dssp HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEE
Confidence 344678889999999999988744332222 23 78999999999887322 2 346678899999
Q ss_pred eCCCCcCcc-----cChhhhcCCCCCCEEEcCCCcCC-----CCCcccccccccccEEEccCCcCc
Q psy1672 153 DMSESRLEH-----ISPEAFTGAKSLESIKLNGNRLS-----HFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 153 ~Ls~n~l~~-----i~~~~~~~l~~L~~L~Ls~N~l~-----~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
+|++|.|.. +.+..+..+++|+.|+|++|.++ .++ ..+..+++|+.|++.+|.+.
T Consensus 193 ~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~-~~l~~~~~L~~L~L~~n~i~ 257 (386)
T 2ca6_A 193 KMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA-IALKSWPNLRELGLNDCLLS 257 (386)
T ss_dssp ECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH-HHGGGCTTCCEEECTTCCCC
T ss_pred ECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHH-HHHccCCCcCEEECCCCCCc
Confidence 999998873 22336778899999999999884 333 45677888999999998864
No 144
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.18 E-value=6.9e-12 Score=129.21 Aligned_cols=174 Identities=18% Similarity=0.160 Sum_probs=132.5
Q ss_pred eEEEccCCCCCccCCC-CCCCCceEEEeeCCCCCCC-ChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEcc
Q psy1672 30 QWMECRDKFLITIPEA-PESELTQVLDMSGNNLQIL-PKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~-~~~~~l~~L~Ls~n~L~~l-~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls 107 (600)
..+++.+..+...+.. .....+++|+|++|.+... ....+. .+++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 73 ~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~--~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~ 150 (336)
T 2ast_B 73 IAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILS--QCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 150 (336)
T ss_dssp SEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHT--TBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred eEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHh--hCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECC
Confidence 4455555555544432 2224499999999998742 233444 79999999999999887667778999999999999
Q ss_pred CC-CCCC--CCccccCCCCCCCEEEccCC-CCCcc-CcccccCCC-CcceeeCCCCc--Cc-ccChhhhcCCCCCCEEEc
Q psy1672 108 DN-LLTS--IPSLTFQSVRFLRDLNLARN-PISKI-EKGAFQFVP-GLVKLDMSESR--LE-HISPEAFTGAKSLESIKL 178 (600)
Q Consensus 108 ~N-~l~~--l~~~~f~~l~~L~~L~Ls~N-~i~~l-~~~~~~~l~-~L~~L~Ls~n~--l~-~i~~~~~~~l~~L~~L~L 178 (600)
+| .++. ++ ..+..+++|++|++++| .++.. .+..+..++ +|+.|+|++|. ++ ...+..+..+++|+.|+|
T Consensus 151 ~~~~l~~~~l~-~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l 229 (336)
T 2ast_B 151 GCSGFSEFALQ-TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 229 (336)
T ss_dssp TCBSCCHHHHH-HHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred CCCCCCHHHHH-HHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeC
Confidence 99 6774 33 34677899999999999 88753 244577888 99999999994 44 222456678999999999
Q ss_pred CCCc-CCCCCcccccccccccEEEccCCc
Q psy1672 179 NGNR-LSHFPVRSVEPLLKLMMIELHDNP 206 (600)
Q Consensus 179 s~N~-l~~l~~~~~~~l~~L~~L~l~~N~ 206 (600)
++|. ++......+..+++|+.|++.+|.
T Consensus 230 ~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 230 SDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 9998 665555677888999999999986
No 145
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=5.6e-11 Score=99.49 Aligned_cols=91 Identities=26% Similarity=0.371 Sum_probs=73.0
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... .+..+..+ +.|.|.+++..|.|.
T Consensus 8 ~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~-----~~~~~~~~------~~L~i~~v~~~d~G~ 76 (100)
T 2edj_A 8 PPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRD-----PRATIQEQ------GTLQIKNLRISDTGT 76 (100)
T ss_dssp SCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSC-----SSCEECTT------CCEEEESCCTTTCCE
T ss_pred CCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCC-----CCEEEcCC------CEEEEccCCcccCEE
Confidence 4555556677788899999999999999999999999988765321 12223233 379999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
|+|.|.|..|.....+.|.|..
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 77 YTCVATSSSGETSWSAVLDVTE 98 (100)
T ss_dssp EEEEEECSSCCCBCCEEEEEES
T ss_pred EEEEEEcCCCCEEEEEEEEEec
Confidence 9999999999998888888854
No 146
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.17 E-value=9.6e-11 Score=97.67 Aligned_cols=92 Identities=21% Similarity=0.342 Sum_probs=72.8
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.++|.|.+.|.|.+.+.|++++..+.... .+.....++ ....|.|.+++..|.|.|
T Consensus 6 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~-----~~~~~~~~~---~~~~L~i~~~~~~D~G~Y 77 (99)
T 1u2h_A 6 PTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQ-----RRFAEEAEG---GLCRLRILAAERGDAGFY 77 (99)
T ss_dssp EEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBT-----TEEEEECGG---GEEEEEESSCCGGGCEEE
T ss_pred CEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCC-----CEEEEECCC---CEEEEEEccCCcCCCEEE
Confidence 455555666788999999999999999999999999998775432 122222222 124799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~ 354 (600)
+|.|.|..|.....+.|.|.
T Consensus 78 ~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 78 TCKAVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECCCceeEEEEEEEE
Confidence 99999999999988888874
No 147
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.17 E-value=1.9e-10 Score=97.94 Aligned_cols=97 Identities=19% Similarity=0.237 Sum_probs=70.0
Q ss_pred cccccccccccccccccceeeeEeecCCC---CeeEEEEcCeeccCCcccCccceEEEe---eCCceeeeeeEEEecCCC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPP---AAISWYWNGRLLLNNTAFSSYQRIFVI---EQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~---p~i~W~~~g~~l~~~~~~~~~~~~~~~---~~g~~~~~s~L~I~~v~~ 328 (600)
|.+...+..+.+..|+.++|.|.+.|.|. |.|.|++++....... ...++.+. ........+.|.|.+++.
T Consensus 5 p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 81 (108)
T 3cx2_A 5 GLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSK---VGQHLQLHDSYDRASKVYLFELHITDAQP 81 (108)
T ss_dssp CSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGG---CBTTEEEEEEEETTTTEEEEEEEECSCCG
T ss_pred cEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCccccccc---CCceEEEeeEEecccccceEEEEEecCCC
Confidence 44455567788999999999999999998 9999999763221110 11122221 111112356899999999
Q ss_pred CCCeEEEEEEecCCCceeEEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
.|+|.|+|.|.|..|..++.+.|.|.
T Consensus 82 ~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 82 AFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ccCEEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999999999999999874
No 148
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.17 E-value=1e-10 Score=110.72 Aligned_cols=104 Identities=27% Similarity=0.415 Sum_probs=62.5
Q ss_pred cEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcc-cccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCC
Q psy1672 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKG-AFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNG 180 (600)
Q Consensus 102 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~-~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 180 (600)
+.|++++|.|+.+|...+. +|++|+|++|.++.+.+. .|..+++|+.|+|++|+|+.+.+..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~ip~~~~~---~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT---TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCccCCCC---CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4555556656555543221 456666666666555443 355666666666666666666566666666666666666
Q ss_pred CcCCCCCcccccccccccEEEccCCcCc
Q psy1672 181 NRLSHFPVRSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 181 N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 208 (600)
|+|+.++...|..+++|+.|++++|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 115 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQIS 115 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 6666666555666666666776666643
No 149
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.17 E-value=1.2e-10 Score=97.05 Aligned_cols=93 Identities=18% Similarity=0.362 Sum_probs=74.0
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+..+.+..|+.+.|.|.+.|.|.|.+.|+++++.+.... ..++.+..++ ..+.|.|.+++..|.|.|
T Consensus 6 P~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~----~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y 78 (100)
T 3irg_A 6 PKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE----QGRFHIENTD---DLTTLIIMDVQKQDGGLY 78 (100)
T ss_dssp EEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG----GGTEEEEECS---SEEEEEESSCCGGGCEEE
T ss_pred CeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCC----CCEEEEEecC---CEEEEEEeecCcccCEEE
Confidence 444555667788899999999999999999999999998775332 2344444332 235899999999999999
Q ss_pred EEEEecCCCceeEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~ 354 (600)
+|.|.|..|..+..+.|.|.
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 79 TLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCcEEEEEEEEEE
Confidence 99999999998888888773
No 150
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.16 E-value=1.8e-10 Score=99.59 Aligned_cols=97 Identities=24% Similarity=0.475 Sum_probs=77.9
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.++|.|.+.|.|.+.+.|++++..+.... .++.+..++. ....|.|.+++..|+|.
T Consensus 15 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~-----~~~~~~~~~~--~~~~L~I~~v~~~D~G~ 87 (116)
T 2kkq_A 15 APMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNT-----DRISLYQDNT--GRVTLLIKDVNKKDAGW 87 (116)
T ss_dssp CCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCB-----TTEEEEECTT--CEEEEEEEEECGGGCEE
T ss_pred CCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCC-----CeEEEEeCCC--CeEEEEECCCCcccCEE
Confidence 4566666778889999999999999999999999999998776421 2344444332 23479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|.|.|..|..+..+.|.|...+
T Consensus 88 Y~C~a~N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 88 YTVSAVNEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCS
T ss_pred EEEEEEcCCCeEEEEEEEEEeCCC
Confidence 999999999999998888886543
No 151
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.15 E-value=1e-10 Score=99.03 Aligned_cols=95 Identities=31% Similarity=0.410 Sum_probs=76.5
Q ss_pred CcccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 252 ACKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 252 ~C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
...|.+...+..+.+..|+.+.|.|.+.|.|.+.+.|++++..+.... +..+..++ ....|.|.+++..|+
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~------~~~~~~~~---~~~~L~i~~~~~~D~ 81 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE------RLSFPADG---AEHGLLLTAALPTDA 81 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS------SEECCEET---TEEEEEESSCCGGGC
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCC------cEEEEeCC---CEEEEEEccCCHHhC
Confidence 456677767777889999999999999999999999999998776433 23332222 123799999999999
Q ss_pred eEEEEEEecCCCceeEEEEEEEEE
Q psy1672 332 GRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
|.|+|.|.|..|.....+.|.|..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 82 GVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEcCCCcEEEEEEEEEEc
Confidence 999999999999998888888854
No 152
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.15 E-value=1.2e-10 Score=101.86 Aligned_cols=88 Identities=20% Similarity=0.294 Sum_probs=68.1
Q ss_pred ccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeC--CceeeeeeEEEecCCCCCCeEEEEEEecCCCce
Q psy1672 268 SSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQ--GEYERKSSLVLTNAQESDSGRFYCVAENRAGIA 345 (600)
Q Consensus 268 ~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~--g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~ 345 (600)
.+..+.|.|.+.|.|.|+|+|+++|+.+..... ....+... +.....++|.|.+++..|+|.|+|+|+|..|.+
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~----~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~ 89 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSF----IFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA 89 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSS----EEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCc----eeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeE
Confidence 566788999999999999999999998875431 11222221 111235789999999999999999999999999
Q ss_pred eEEEEEEEEEccCC
Q psy1672 346 DANFTLQVTYRGVG 359 (600)
Q Consensus 346 ~~~v~L~V~~~~~~ 359 (600)
.+++.|.|...+..
T Consensus 90 ~~t~~l~v~~~P~~ 103 (126)
T 1he7_A 90 SASIMAAFMDNPFE 103 (126)
T ss_dssp EEEEEECCCSCTTS
T ss_pred EEEEEEEEEcCCCC
Confidence 99999988765543
No 153
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.15 E-value=1.7e-13 Score=130.59 Aligned_cols=135 Identities=21% Similarity=0.241 Sum_probs=110.0
Q ss_pred CCCccEEEeecccCcccCc------cccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCC
Q psy1672 74 LLNLQKLFLARCHIGQIDS------GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP 147 (600)
Q Consensus 74 l~~L~~L~L~~n~l~~i~~------~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~ 147 (600)
...++.++++.+.+....+ ..|..+++|++|+|++|.|+.++ .+..+++|++|+|++|.++.++ ..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~--~~~~l~~L~~L~l~~n~l~~l~-~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIKKIE-NLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC--CHHHHTTCCEEEEEEEEECSCS-SHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc--ccccCCCCCEEECCCCCccccc-chhhcCC
Confidence 3344444444444433322 27899999999999999999987 6888999999999999999874 4566778
Q ss_pred CcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCc-ccccccccccEEEccCCcCcccccc
Q psy1672 148 GLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV-RSVEPLLKLMMIELHDNPWVCDCNM 213 (600)
Q Consensus 148 ~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~-~~~~~l~~L~~L~l~~N~~~C~C~l 213 (600)
+|+.|+|++|++..++ .+..+++|+.|+|++|.+..++. ..+..+++|+.|++.+|++.|.|..
T Consensus 94 ~L~~L~L~~N~l~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 94 TLEELWISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HCSEEEEEEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCEEECcCCcCCcCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999999999999983 58889999999999999998764 5678899999999999999887653
No 154
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.14 E-value=1.6e-10 Score=96.19 Aligned_cols=92 Identities=21% Similarity=0.314 Sum_probs=73.7
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... +..+..++ ....|.|.+++..|+|.
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~------~~~~~~~~---~~~~L~i~~~~~~d~G~ 76 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGG------KYKLSEDK---GGFFLEIHKTDTSDSGL 76 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSS------SEEEEEET---TEEEEEECSCCGGGCEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCC------CEEEEEeC---CEEEEEECCCCcccCEE
Confidence 3455555667788999999999999999999999999998776432 33333332 13479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|+|.|.|..|.....+.|.|.
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 77 YTCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEeCCCcEeEEEEEEEE
Confidence 999999999999888888774
No 155
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.14 E-value=2.6e-10 Score=120.77 Aligned_cols=167 Identities=20% Similarity=0.259 Sum_probs=142.5
Q ss_pred eEEEccCCCCCccCCCCCC-CCceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccC
Q psy1672 30 QWMECRDKFLITIPEAPES-ELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108 (600)
Q Consensus 30 ~~v~C~~~~L~~ip~~~~~-~~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~ 108 (600)
..+.- ..+++.|+..... ..|+.+.|.+ .++.|...+|. ++.+|+.|+|.+|+++.|+..+|. ..+|+.+.|..
T Consensus 138 ~~i~l-~~~i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~--~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~ 212 (401)
T 4fdw_A 138 AKVVL-NEGLKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFY--YCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPV 212 (401)
T ss_dssp SEEEC-CTTCCEECTTTTTTCCCCEEECCT-TCCEECSSTTT--TCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCT
T ss_pred cEEEe-CCCccEECHHhcCCCCceEEEeCC-CccEehHHHhh--CcccCCeeecCCCcceEechhhEe-ecccCEEEeCC
Confidence 34553 3447888764332 2489999986 79999999998 899999999999999999999998 58999999984
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCC----
Q psy1672 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLS---- 184 (600)
Q Consensus 109 N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~---- 184 (600)
.++.|...+|.++.+|+.++|..| ++.+...+|.+ .+|+.+.| .+.++.|...+|.++.+|+.+++.+|.+.
T Consensus 213 -~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~ 288 (401)
T 4fdw_A 213 -TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPE 288 (401)
T ss_dssp -TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTT
T ss_pred -chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcc
Confidence 599999999999999999999875 88898899998 78999999 56789999999999999999999988776
Q ss_pred -CCCcccccccccccEEEccCC
Q psy1672 185 -HFPVRSVEPLLKLMMIELHDN 205 (600)
Q Consensus 185 -~l~~~~~~~l~~L~~L~l~~N 205 (600)
.++...|..+.+|+.+.+.++
T Consensus 289 ~~I~~~aF~~c~~L~~l~l~~~ 310 (401)
T 4fdw_A 289 AMIHPYCLEGCPKLARFEIPES 310 (401)
T ss_dssp CEECTTTTTTCTTCCEECCCTT
T ss_pred cEECHHHhhCCccCCeEEeCCc
Confidence 688889999999999998754
No 156
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=7.1e-11 Score=100.61 Aligned_cols=97 Identities=24% Similarity=0.495 Sum_probs=76.7
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.++|.|.+.+.|.+.+.|+++++.+..... .......++ ...|.|.+++..|.|.
T Consensus 9 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~----~~~~~~~~~----~~~L~i~~v~~~D~G~ 80 (110)
T 2dm3_A 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSA----HKMLVRENG----VHSLIIEPVTSRDAGI 80 (110)
T ss_dssp CCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSS----EEEEECTTS----CEEEEESSCCGGGCSB
T ss_pred CCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCc----eEEEEecCC----eEEEEEeeCCcccCEE
Confidence 56666667788899999999999999999999999999887654321 111121222 3479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEccC
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRGV 358 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~~ 358 (600)
|+|.|.|..|..+..+.|.|...+.
T Consensus 81 Y~C~a~n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 81 YTCIATNRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp BCEEEECSSCEEEECCEEEEECCCC
T ss_pred EEEEEECCCCEEEEEEEEEEeCCCC
Confidence 9999999999999889998876543
No 157
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.13 E-value=1.4e-10 Score=103.88 Aligned_cols=85 Identities=19% Similarity=0.297 Sum_probs=67.1
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCe----------------------------eccCCcccCccceEEEeeC
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGR----------------------------LLLNNTAFSSYQRIFVIEQ 312 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~----------------------------~l~~~~~~~~~~~~~~~~~ 312 (600)
+..+.+..|+.++|.|.+.|.|.|.|.|++++. .+.. ...++.+...
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~r~~i~~~ 99 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCE-----TEGRVRVETT 99 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCS-----CSSSCEEEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecC-----CCCeEEEEeC
Confidence 567888999999999999999999999999882 2211 1123333322
Q ss_pred CceeeeeeEEEecCCCCCCeEEEEEEecCCCceeEEEEEEE
Q psy1672 313 GEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 313 g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V 353 (600)
+ ..+.|.|.+++..|+|.|+|+|.|..|.+...+.|.|
T Consensus 100 ~---~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 100 K---DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp T---TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred C---CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 2 1357999999999999999999999999998888877
No 158
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=1.9e-10 Score=98.00 Aligned_cols=97 Identities=21% Similarity=0.300 Sum_probs=76.1
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.+.|.|.+.|.|.+.|.|+++++.+.... .+..+..+.. ....|.|.+++..|.|.
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~-----~~~~~~~~~~--~~~~L~i~~v~~~D~G~ 80 (110)
T 2dm2_A 8 APFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKS-----DHYTIQRDLD--GTCSLHTTASTLDDDGN 80 (110)
T ss_dssp CCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTC-----SSEEEEECTT--CEEEEEESSCCTTTCSC
T ss_pred CCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCC-----CeEEEEECCC--cEEEEEECCCChhhCEE
Confidence 4555556677788999999999999999999999999988775422 2333333211 12479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|.|.|..|..+..+.|.|...+
T Consensus 81 Y~C~a~N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 81 YTIMAANPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp CEEEEECTTCCEEECCCEEEECCS
T ss_pred EEEEEEECCCeEEEEEEEEEECCC
Confidence 999999999999988888886654
No 159
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=2.8e-10 Score=98.46 Aligned_cols=94 Identities=19% Similarity=0.250 Sum_probs=73.0
Q ss_pred ccccccc---ccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCC
Q psy1672 253 CKPEIRM---DSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQES 329 (600)
Q Consensus 253 C~p~i~~---~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~ 329 (600)
..|.+.. ....+.+..|+.+.|.|.+.|.|.|.+.|+++++.+... +..+...+ ..+.|.|.+++..
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~-------~~~~~~~~---~~~~L~i~~~~~~ 89 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTS-------RVHVRTSD---FDTVFFVRQAARS 89 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCS-------SCEEEECS---SEEEEEESSCCTT
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCC-------cEEEEECC---CeEEEEECCCChh
Confidence 3455543 245677889999999999999999999999999887521 12222221 2357999999999
Q ss_pred CCeEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 330 DSGRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 330 d~G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 90 D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 116 (118)
T 2e7c_A 90 DSGEYELSVQIENMKDTATIRIRVVEK 116 (118)
T ss_dssp TCEEEEEEEECSSCEECCEEEEEEECC
T ss_pred cCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 999999999999999998888888654
No 160
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=1.6e-10 Score=99.87 Aligned_cols=93 Identities=26% Similarity=0.393 Sum_probs=75.7
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.+.|.|.+.|.|.+.+.|++++..+... ..+..+..++ .|.|.+++.+|.|.
T Consensus 8 pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~-----~~~~~~~~~~------~L~i~~v~~~D~G~ 76 (118)
T 2eo9_A 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQ-----DSRIKQLENG------VLQIRYAKLGDTGR 76 (118)
T ss_dssp SCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTT-----STTEEEEETT------EEEEESCCGGGCCC
T ss_pred CCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCC-----CCeEEEccCC------EEEEccCCcCCCEE
Confidence 455666667788899999999999999999999999998877532 1234344444 79999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|.|.|..|.....+.|.|...+
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 77 YTCIASTPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp EEEEEECSSCEEEEECCEEEECCS
T ss_pred EEEEEEcCCCcEEEEEEEEEEeCC
Confidence 999999999999888888886543
No 161
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.11 E-value=1.2e-10 Score=98.89 Aligned_cols=92 Identities=28% Similarity=0.480 Sum_probs=75.0
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..|.+...+..+.+..|+.+.|.|.+.|.|.|.+.|++++..+.... +..+...+ ..+.|.|.+++..|+|
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~------~~~~~~~~---~~~~L~I~~v~~~D~G 83 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSA------RHQVTTTK---YKSTFEISSVQASDEG 83 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCS------SEEEEECS---SEEEEEECCCCSSCCS
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCC------CEEEEECC---CEEEEEECcCCchhCE
Confidence 45666677788889999999999999999999999999987765432 33333322 2358999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEE
Q psy1672 333 RFYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V 353 (600)
.|+|.|.|..|..+..+.|.|
T Consensus 84 ~Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 84 NYSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp EEEECCBCSSCBCCEEEEEEE
T ss_pred EEEEEEEeCCCeEEEEEEEEE
Confidence 999999999999988888877
No 162
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=1.2e-10 Score=97.23 Aligned_cols=89 Identities=22% Similarity=0.422 Sum_probs=71.4
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++++.+.... . ....+ .+.|.|.+++..|.|
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~------~--~~~~~----~~~L~i~~v~~~D~G 77 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYAR------S--TCEAG----VAELHIQDALPEDHG 77 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCC------C--EEETT----EEEEEECSCCTTCCB
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccc------e--EeeCC----eEEEEECCCChhhCE
Confidence 35666666677888999999999999999999999999988765332 1 11111 357999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEE
Q psy1672 333 RFYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V 353 (600)
.|+|.|.|..|..+..+.|.|
T Consensus 78 ~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 78 TYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp CEEEEEECSSCEEEEECCEEE
T ss_pred EEEEEEEECCCeEEEEEEEEE
Confidence 999999999999888777765
No 163
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.11 E-value=5e-10 Score=93.06 Aligned_cols=86 Identities=17% Similarity=0.315 Sum_probs=69.4
Q ss_pred cccccccccccccceeeeEeecC-CCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEE
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSI-PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCV 337 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~ 337 (600)
..+..+.+..|+.+.|.|.+.|. |.+.+.|++++..+.... +..+...+ ....|.|.+++..|.|.|+|.
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~------~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~ 76 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSE------KYEITYED---GVAILYVKDITKLDDGTYRCK 76 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSS------SEEEEEET---TEEEEEECSCCGGGCEEEEEE
T ss_pred ccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCC------CEEEEEcC---CeEEEEEecCChhhCeEEEEE
Confidence 34567788999999999999997 999999999998776432 23332222 134799999999999999999
Q ss_pred EecCCCceeEEEEEEE
Q psy1672 338 AENRAGIADANFTLQV 353 (600)
Q Consensus 338 a~N~~G~~~~~v~L~V 353 (600)
|.|..|.....+.|.|
T Consensus 77 a~n~~g~~~~~~~l~V 92 (97)
T 2bk8_A 77 VVNDYGEDSSYAELFV 92 (97)
T ss_dssp EECSSCEEEEEEEEEE
T ss_pred EECCCCeEeEEEEEEE
Confidence 9999999988888877
No 164
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.09 E-value=2.2e-10 Score=97.14 Aligned_cols=93 Identities=19% Similarity=0.368 Sum_probs=65.3
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... +..+... .+.|.|.+++..|.|.
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~------~~~~~~~-----~~~L~i~~v~~~D~G~ 78 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS------GIVLKDG-----NRNLTIRRVRKEDEGL 78 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBT------TEEEETT-----TTEEEECSCCGGGCEE
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCC------CeEEeCC-----CcEEEEeecCcccCEE
Confidence 4555556677788999999999999999999999999987765432 2222222 2479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|.|.|..|.....+.|.|...+
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 79 YTCQACSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp EEEEEC----CEEEEEEEEEEC--
T ss_pred EEEEEEeCCCceEEEEEEEEeCCC
Confidence 999999999999999999886543
No 165
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=5e-10 Score=94.17 Aligned_cols=89 Identities=17% Similarity=0.222 Sum_probs=69.4
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
+.+......+.+.+|+.+.|.|.+ .|.+.+.|+++|+.+.... ++.+..++. ...|.|.+++.+|.|.|
T Consensus 8 ~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~------r~~i~~~~~---~~~L~I~~v~~~D~G~Y 76 (100)
T 2yuz_A 8 LKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESD------RLKVVQKGR---IHKLVIANALTEDEGDY 76 (100)
T ss_dssp CCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCS------SEEEEECSS---EEEEEESSCCGGGCSEE
T ss_pred CEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCC------cEEEEEeCC---EEEEEECCCChhhCEEE
Confidence 445555677888999999999999 7889999999999886433 444444442 34799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEEEc
Q psy1672 335 YCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
+|.|.|. ..+..+.|.|...
T Consensus 77 ~C~a~N~--~~~~~a~L~V~~~ 96 (100)
T 2yuz_A 77 VFAPDAY--NVTLPAKVHVISG 96 (100)
T ss_dssp EEEESSS--CCCEEEEEEEECC
T ss_pred EEEEcCC--CeeEEEEEEEeCC
Confidence 9999998 4566677777543
No 166
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.08 E-value=3.9e-10 Score=93.51 Aligned_cols=85 Identities=18% Similarity=0.370 Sum_probs=68.7
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.|.| +.+.|+++++.+.... ++.+. .+.|.|.+++..|+|.|
T Consensus 10 p~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~------~~~~~-------~~~L~i~~~~~~D~G~Y 75 (95)
T 2ckn_A 10 WGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESN------RTRIT-------GEEVEVRDSIPADSGLY 75 (95)
T ss_dssp CCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCS------SEEEC-------SSEEEESSCCGGGSEEE
T ss_pred CEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCC------CEEEe-------CCEEEECCCChHHCEEE
Confidence 4445556677889999999999999987 7999999988765432 22221 23799999999999999
Q ss_pred EEEEecCCCceeEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V 353 (600)
+|.|.|..|.....+.|.|
T Consensus 76 ~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 76 ACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEEEEETTEEEEEEEEEEE
T ss_pred EEEeccCCCcEEEEEEEEE
Confidence 9999999999888888876
No 167
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.06 E-value=8.5e-10 Score=96.58 Aligned_cols=97 Identities=13% Similarity=0.215 Sum_probs=71.0
Q ss_pred ccccccccccccccccceeeeEeecC---CCCeeEEEEcCeeccCCcccCccceEEEe---eCCceeeeeeEEEecCCCC
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSI---PPAAISWYWNGRLLLNNTAFSSYQRIFVI---EQGEYERKSSLVLTNAQES 329 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~---P~p~i~W~~~g~~l~~~~~~~~~~~~~~~---~~g~~~~~s~L~I~~v~~~ 329 (600)
.+...+..+.+.+|+.++|.|.+.|. |.|.|.|+++........ ...++.+. ..........|.|.+++..
T Consensus 9 ~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~---~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 85 (126)
T 2dav_A 9 LFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASK---AGKHLQLKETFERHSRVYTFEMQIIKAKDN 85 (126)
T ss_dssp SCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHH---TTSSEEEEEEEETTTTEEEEEEEECSCCTT
T ss_pred EEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCC---CCceEEEccccccccccceEEEEEccCCcc
Confidence 34555778889999999999999875 899999999642110000 01122221 1111123568999999999
Q ss_pred CCeEEEEEEecCCCceeEEEEEEEEE
Q psy1672 330 DSGRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 330 d~G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
|+|.|+|.|.|..|..++.+.|.|..
T Consensus 86 DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 86 FAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp SCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999999999987
No 168
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=9.6e-10 Score=95.15 Aligned_cols=96 Identities=16% Similarity=0.206 Sum_probs=69.9
Q ss_pred ccccccccccccccccceeeeEeecC---CCCeeEEEEcCee-ccCCcccCccceEEEe---eCCceeeeeeEEEecCCC
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSI---PPAAISWYWNGRL-LLNNTAFSSYQRIFVI---EQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~---P~p~i~W~~~g~~-l~~~~~~~~~~~~~~~---~~g~~~~~s~L~I~~v~~ 328 (600)
.+...+..+.+.+|+.++|.|.+.|. |.|.|.|+++... +.... ..++.+. ..........|.|.+++.
T Consensus 14 ~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 14 VFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKS----GARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp SCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCST----TSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred eEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCC----ccEEEeccccccccccceEEEEEeeCCh
Confidence 34445678889999999999999875 7899999996422 11111 1122221 111122356899999999
Q ss_pred CCCeEEEEEEecCCCceeEEEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
.|.|.|+|.|.|..|..++.+.|.|..
T Consensus 90 ~D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 90 GDRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp TTCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred hhCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 999999999999999999999998853
No 169
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.04 E-value=4.6e-11 Score=128.49 Aligned_cols=60 Identities=27% Similarity=0.234 Sum_probs=25.2
Q ss_pred ceEEEeeCCCCCCCChh-hhcccCCCCccEEEeecccCcccC----ccccCCCCCccEEEccCCCCC
Q psy1672 51 TQVLDMSGNNLQILPKE-AFRRAGLLNLQKLFLARCHIGQID----SGALDGLTNLIEIDLSDNLLT 112 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~-~f~~~~l~~L~~L~L~~n~l~~i~----~~~f~~l~~L~~L~Ls~N~l~ 112 (600)
+++|+|++|+++..... .+. .+++|+.|+|++|+++... +.+|..+++|++|+|++|.++
T Consensus 5 l~~L~Ls~~~l~~~~~~~~~~--~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 69 (461)
T 1z7x_W 5 IQSLDIQCEELSDARWAELLP--LLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG 69 (461)
T ss_dssp EEEEEEESCCCCHHHHHHHHH--HHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCH
T ss_pred ceehhhhhcccCchhHHHHHh--hcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCC
Confidence 44455554444432221 122 3444555555554443211 223344444555555444443
No 170
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.03 E-value=1.5e-11 Score=132.31 Aligned_cols=155 Identities=16% Similarity=0.144 Sum_probs=94.4
Q ss_pred ceEEEeeCCCCCCCC----hhhhcccCCCCccEEEeecccCcccC-----ccccCCCCCccEEEccCCCCCC-----CCc
Q psy1672 51 TQVLDMSGNNLQILP----KEAFRRAGLLNLQKLFLARCHIGQID-----SGALDGLTNLIEIDLSDNLLTS-----IPS 116 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~----~~~f~~~~l~~L~~L~L~~n~l~~i~-----~~~f~~l~~L~~L~Ls~N~l~~-----l~~ 116 (600)
+++|++++|.++... ...+. .+++|++|+|++|.++... +..+..+++|++|+|++|.|+. ++.
T Consensus 201 L~~L~L~~n~l~~~~~~~l~~~l~--~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 201 LEALKLESCGVTSDNCRDLCGIVA--SKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCEEECTTSCCBTTHHHHHHHHHH--HCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred ceEEEccCCCCcHHHHHHHHHHHH--hCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 888888888887632 12222 5778888888888776532 2333457788888888887776 333
Q ss_pred cccCCCCCCCEEEccCCCCCccCccccc-----CCCCcceeeCCCCcCcccC----hhhhcCCCCCCEEEcCCCcCCCCC
Q psy1672 117 LTFQSVRFLRDLNLARNPISKIEKGAFQ-----FVPGLVKLDMSESRLEHIS----PEAFTGAKSLESIKLNGNRLSHFP 187 (600)
Q Consensus 117 ~~f~~l~~L~~L~Ls~N~i~~l~~~~~~-----~l~~L~~L~Ls~n~l~~i~----~~~~~~l~~L~~L~Ls~N~l~~l~ 187 (600)
.+..+++|++|+|++|.+.......+. ..++|+.|+|++|.++... +..+..+++|+.|+|++|.+....
T Consensus 279 -~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 279 -VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp -HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred -HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 355567777888877777543222222 2356777777777766542 233445667777777777665543
Q ss_pred cccccc-----cccccEEEccCCcCc
Q psy1672 188 VRSVEP-----LLKLMMIELHDNPWV 208 (600)
Q Consensus 188 ~~~~~~-----l~~L~~L~l~~N~~~ 208 (600)
...+.. .+.|+.|++.+|.+.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCC
Confidence 222221 346667777666543
No 171
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.02 E-value=1e-09 Score=99.89 Aligned_cols=96 Identities=21% Similarity=0.331 Sum_probs=76.0
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..|.+...+..+.+..|+.++|.|.+.|.|.+.+.|+++++.+.... +..+..... ..+.|.|.+++..|.|
T Consensus 40 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~------~~~~~~~~~--~~~~L~I~~v~~~D~G 111 (154)
T 1fhg_A 40 VKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESR------HFQIDYDEE--GNCSLTISEVCGDDDA 111 (154)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSS------SEEEEECTT--CEEEEEESSCCGGGCE
T ss_pred CCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCC------cEEEEECCC--CeEEEEECCCChhcCE
Confidence 35666666677888999999999999999999999999998776432 233322111 1358999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEc
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
.|+|.|.|..|.....+.|.|...
T Consensus 112 ~Y~C~a~N~~G~~~~~~~l~V~~~ 135 (154)
T 1fhg_A 112 KYTCKAVNSLGEATCTAELLVETM 135 (154)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEEECCCeEEEEEEEEEeCc
Confidence 999999999999998888888644
No 172
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.02 E-value=5.2e-10 Score=93.39 Aligned_cols=84 Identities=24% Similarity=0.427 Sum_probs=66.6
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+.+..|+.+.|.|.+.|.|.+.+.|++++..+....... ....... .+.|.|.+++..|+|.|+|.|.|.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~---~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~N~ 87 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG---GYKVRNQ-----HWSLIMESVVPSDKGNYTCVVENE 87 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTT---CCEEEGG-----GTEEEECSCCGGGCEEEEEEEEET
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccc---cEEEecC-----eEEEEEccCCcCCCEEEEEEEEeC
Confidence 45678899999999999999999999999998776533211 1111111 247999999999999999999999
Q ss_pred CCceeEEEEEEE
Q psy1672 342 AGIADANFTLQV 353 (600)
Q Consensus 342 ~G~~~~~v~L~V 353 (600)
.|.....+.|.|
T Consensus 88 ~g~~~~~~~l~V 99 (100)
T 3caf_A 88 YGSINHTYHLDV 99 (100)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCEEEEEEEEEE
Confidence 999888888776
No 173
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.01 E-value=7.9e-10 Score=90.79 Aligned_cols=81 Identities=15% Similarity=0.291 Sum_probs=65.3
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
+.+...+....+..|+.+.|.|.+.|.|.|.+.|+++++.+.... ...|.|.+++..|+|.|
T Consensus 4 ~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~------------------~~~L~i~~v~~~d~G~Y 65 (91)
T 3bfo_A 4 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------------------KKLYMVPYVDLEHQGTY 65 (91)
T ss_dssp CEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC------------------SSEEEESSCCGGGCEEE
T ss_pred eEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC------------------CCeEEECCCCHHhCEEE
Confidence 344455666778899999999999999999999999988765432 13799999999999999
Q ss_pred EEEEecCCCcee-EEEEEEE
Q psy1672 335 YCVAENRAGIAD-ANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~~-~~v~L~V 353 (600)
+|.|.|..|... ..+.|.|
T Consensus 66 ~C~a~n~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 66 WCHVYNDRDSQDSKKVEIII 85 (91)
T ss_dssp EEEEECSSCEEECCCEEEEE
T ss_pred EEEEEcCCCCEEeeeEEEEE
Confidence 999999999754 4466665
No 174
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.98 E-value=2.9e-11 Score=126.85 Aligned_cols=159 Identities=14% Similarity=0.161 Sum_probs=117.5
Q ss_pred CceEEEeeCCCCCCCChhhhccc---CCCCccEEEeecccCcccCcccc-CCCCCccEEEccCCCCCCCCcccc-----C
Q psy1672 50 LTQVLDMSGNNLQILPKEAFRRA---GLLNLQKLFLARCHIGQIDSGAL-DGLTNLIEIDLSDNLLTSIPSLTF-----Q 120 (600)
Q Consensus 50 ~l~~L~Ls~n~L~~l~~~~f~~~---~l~~L~~L~L~~n~l~~i~~~~f-~~l~~L~~L~Ls~N~l~~l~~~~f-----~ 120 (600)
.++.|+|++|.|+......+... ...+|+.|+|++|.++......+ ..+.+|++|+|++|.|+......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 38999999999986544433311 33699999999999865433222 346689999999999986443333 3
Q ss_pred CCCCCCEEEccCCCCCccCc----ccccCCCCcceeeCCCCcCcccC----hhhhcCCCCCCEEEcCCCcCCCCCcc---
Q psy1672 121 SVRFLRDLNLARNPISKIEK----GAFQFVPGLVKLDMSESRLEHIS----PEAFTGAKSLESIKLNGNRLSHFPVR--- 189 (600)
Q Consensus 121 ~l~~L~~L~Ls~N~i~~l~~----~~~~~l~~L~~L~Ls~n~l~~i~----~~~~~~l~~L~~L~Ls~N~l~~l~~~--- 189 (600)
..++|++|+|++|.|+.... ..+..+++|+.|+|++|.|.... ...+....+|+.|+|++|.|+.....
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 46789999999999876432 23467889999999999998654 34566788999999999999865432
Q ss_pred -cccccccccEEEccCCcCc
Q psy1672 190 -SVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 190 -~~~~l~~L~~L~l~~N~~~ 208 (600)
.+...+.|+.|++++|++.
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCC
T ss_pred HHHHhCCCCCEEeccCCCCC
Confidence 2344578999999999865
No 175
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.98 E-value=1.3e-09 Score=88.43 Aligned_cols=78 Identities=22% Similarity=0.474 Sum_probs=60.7
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+.+..|+.+.|.|.+.+ |.|.|.|+++|+.+.... ++.+..++. ...|.|.+++..|.|.|+|.|.|.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~------~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~ 73 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQG------RVQLEQAGA---RQVLRVQGARSGDAGEYLCDAPQD 73 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCS------SEEEEECSS---CEEEEESSCSSTTCEEEEEECTTT
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccc------cEEEeecCC---eEEEEecCCCCcccEEEEEEECCE
Confidence 4567889999999999966 889999999999886543 344444442 247999999999999999998664
Q ss_pred CCceeEEEEEEE
Q psy1672 342 AGIADANFTLQV 353 (600)
Q Consensus 342 ~G~~~~~v~L~V 353 (600)
...+.|.|
T Consensus 74 ----~~~a~l~V 81 (84)
T 2lu7_A 74 ----SRIFLVSV 81 (84)
T ss_dssp ----CEEEEEEE
T ss_pred ----EEEEEEEE
Confidence 55566666
No 176
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.97 E-value=1.1e-09 Score=90.64 Aligned_cols=85 Identities=26% Similarity=0.304 Sum_probs=64.1
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
+.+......+.+.+|+.++|.|.+.+ +.+.+.|+++|+.+.... ++.+..++. ...|.|.+++.+|+|.|
T Consensus 6 ~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~------~~~i~~~g~---~~~L~I~~v~~~D~G~Y 75 (93)
T 1waa_A 6 IEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASP------DCEIIEDGK---KHILILHNCQLGMTGEV 75 (93)
T ss_dssp CCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBT------TEEEEEETT---EEEEEECSCCGGGCEEE
T ss_pred cEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCC------CEEEEEECC---EEEEEECCCChhhCEEE
Confidence 44455566788999999999999986 557899999999886433 344444432 24799999999999999
Q ss_pred EEEEecCCCceeEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V 353 (600)
+|.|.|. ..+..|.|
T Consensus 76 ~C~a~n~----~~sa~L~V 90 (93)
T 1waa_A 76 SFQAANT----KSAANLKV 90 (93)
T ss_dssp EEEETTE----EEEEEEEE
T ss_pred EEEECCC----cEEEEEEE
Confidence 9999985 34455555
No 177
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.97 E-value=2.2e-10 Score=99.75 Aligned_cols=98 Identities=26% Similarity=0.357 Sum_probs=73.8
Q ss_pred cccccccccccccccccccceeeeEeecCCCCe-eEEEEcCeeccCCcccCccceEEEeeC-CceeeeeeEEEecCCCCC
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAA-ISWYWNGRLLLNNTAFSSYQRIFVIEQ-GEYERKSSLVLTNAQESD 330 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~~-g~~~~~s~L~I~~v~~~d 330 (600)
..|.+.. +....+..|+.+.|.|.+.|.|.|. |.|+++++.+.... ..++.+... ......+.|.|.+++..|
T Consensus 13 ~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (122)
T 2cry_A 13 GPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGT----SGRYTVETISTEEGVISTLTISNIVRAD 87 (122)
T ss_dssp SSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEE----ETTEEEEEEEETTEEEEEEECTTCCHHH
T ss_pred cCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCC----CCCEEEEEecCCCceEEEEEEcCCChhh
Confidence 3455555 6677889999999999999999987 99999988776421 123333211 001124589999999999
Q ss_pred C-eEEEEEEecCCCceeEEEEEEEEE
Q psy1672 331 S-GRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 331 ~-G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
. |.|+|.|.|..|.+...+.|.|..
T Consensus 88 ~~G~Y~C~a~N~~G~~~~~~~l~V~~ 113 (122)
T 2cry_A 88 FQTIYNCTAWNSFGSDTEIIRLKEQG 113 (122)
T ss_dssp HHSCEEEEEECSSCEEEEEECCCCSC
T ss_pred CCceEEEEEECCCCeEEEEEEEEECC
Confidence 9 999999999999999888887754
No 178
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.94 E-value=3.4e-09 Score=89.37 Aligned_cols=98 Identities=18% Similarity=0.228 Sum_probs=70.5
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCe-eccC-CcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGR-LLLN-NTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~-~l~~-~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+...+..+.+..|+.++|.|.+.+.|.+.+.|++++. .+.. ........++.+..... ....|.|.+++.+|+|
T Consensus 7 p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 7 QGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASW--HELSISVSDVSLSDEG 84 (108)
T ss_dssp -CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESS--SEEEEEECSCCGGGCE
T ss_pred CCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCC--CcEEEEECCCChhHCe
Confidence 455556677889999999999999999999999999765 2211 11111122333322211 2468999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEE
Q psy1672 333 RFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
.|+|.|.| .|..+..+.|.|..
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~~ 106 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVLG 106 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEEC
T ss_pred EEEEEEEc-CCCcEEEEEEEEEc
Confidence 99999999 88888888888854
No 179
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.94 E-value=2.1e-09 Score=93.21 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=67.8
Q ss_pred ccccccccccceeeeEeec--CCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEe
Q psy1672 262 RYVEAVSSENATVVCRVDS--IPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAE 339 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g--~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~ 339 (600)
..+.+..|+.++|.|.+.| .|.+.+.|++++..+......... +............+.|.|.+++.+|+|.|+|.|.
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRD-LKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCS-CCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeec-cccccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 4457889999999999998 445689999987643211000000 1111111112245689999999999999999999
Q ss_pred cCCCceeEEEEEEEEEccC
Q psy1672 340 NRAGIADANFTLQVTYRGV 358 (600)
Q Consensus 340 N~~G~~~~~v~L~V~~~~~ 358 (600)
|..|...+.+.|.|..++.
T Consensus 95 n~~g~~~~~~~l~V~~~p~ 113 (122)
T 3s35_X 95 SGLMTKKNSTFVRVHEKPF 113 (122)
T ss_dssp CSSCEEEEEEEEEEEEEEC
T ss_pred cCCCceEEEEEEEEeccCe
Confidence 9999999999999976653
No 180
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.93 E-value=2.8e-09 Score=90.15 Aligned_cols=99 Identities=19% Similarity=0.341 Sum_probs=68.5
Q ss_pred ccccccccccccccccccceeeeEeecC--CCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSI--PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~--P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
.|.+...+....+..|+.++|.|.+.+. +.+.+.|++++..+...... ...+............+.|.|.+++..|.
T Consensus 10 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (112)
T 3so5_A 10 XPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEME-NYAHLRAQGGELMEYTTILRLRNVEFTSE 88 (112)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEE-EEEETTGGGSSCEEEEEEEEECSCCGGGC
T ss_pred CCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCccccccccc-ceeeeeccCCCccccceEEEEeccccccC
Confidence 4556666677788999999999999954 46899999999877543200 00000000011112346899999999999
Q ss_pred eEEEEEEecCCCc-eeEEEEEEE
Q psy1672 332 GRFYCVAENRAGI-ADANFTLQV 353 (600)
Q Consensus 332 G~Y~C~a~N~~G~-~~~~v~L~V 353 (600)
|.|+|.|.|..|. .+..+.|.|
T Consensus 89 G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 89 GXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999998 346666655
No 181
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=2.3e-09 Score=89.57 Aligned_cols=81 Identities=19% Similarity=0.364 Sum_probs=65.6
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+..+.+..|+.++|.|.+.+.| |.+.|++++..+.... ++.+. . ..|.|.+++..|+|.|+|.|.|
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~------~~~~~-~------~~L~i~~v~~~D~G~Y~C~a~n 75 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESN------RTRIT-G------EEVEVQDSVPADSGLYACVTSS 75 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCS------SEEEC-S------SEEEETTCCTTTCEEEEEEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCC------cEEEE-C------CEEEEccCCHHHCEEEEEEEEe
Confidence 4567788999999999999977 7999999987765322 22222 2 3799999999999999999999
Q ss_pred CCCceeEEEEEEEEE
Q psy1672 341 RAGIADANFTLQVTY 355 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~ 355 (600)
..|.....+.|.|..
T Consensus 76 ~~g~~~~~~~l~V~~ 90 (99)
T 2cr3_A 76 PSGSDTTYFSVNVSD 90 (99)
T ss_dssp TTEEEEEEEEECBCS
T ss_pred CCceEEEEEEEEEec
Confidence 999988888887754
No 182
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.92 E-value=5.3e-09 Score=90.31 Aligned_cols=84 Identities=17% Similarity=0.302 Sum_probs=64.8
Q ss_pred ccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCceeEEE
Q psy1672 270 ENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANF 349 (600)
Q Consensus 270 ~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~v 349 (600)
....|.|.+.|.|.|.+.|+++|+.+.... ..+......+ ....+.|.|.+++..|.|.|+|.|.|..|.+++.+
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~----~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~ 95 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESK----IIHVEYYQEG-EISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTI 95 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSS----SEEEEEEECS-SEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCC----ceeEEEeccC-ccccEEEEECCCChhcCEEEEEEEECCCCeEeeEE
Confidence 456789999999999999999998876543 1122222221 12356899999999999999999999999999998
Q ss_pred EEEEEEccC
Q psy1672 350 TLQVTYRGV 358 (600)
Q Consensus 350 ~L~V~~~~~ 358 (600)
.|.|...+.
T Consensus 96 ~l~v~~~P~ 104 (118)
T 1wwc_A 96 NGHFLKEPF 104 (118)
T ss_dssp EECCSCCCC
T ss_pred EEEEccCCC
Confidence 887765543
No 183
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.92 E-value=3.7e-09 Score=87.88 Aligned_cols=79 Identities=22% Similarity=0.338 Sum_probs=62.8
Q ss_pred cccccccccccceeeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEe
Q psy1672 261 SRYVEAVSSENATVVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAE 339 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~ 339 (600)
+..+.+..|+.++|.|.+. +.|.+.+.|++++....... . ...+ +.|.|.+++.+|+|.|+|.|.
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~-------~-~~~~------~~L~i~~v~~~D~G~Y~C~a~ 82 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR-------A-MDFN------GILTIRNVQPSDAGTYVCTGS 82 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT-------E-EEET------TEEEECSCCGGGCEEEEEEEE
T ss_pred CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce-------e-ecCC------CEEEEeCCChhhCEEEEEEec
Confidence 4566788999999999999 78999999999653322111 1 1122 379999999999999999999
Q ss_pred cCCCceeEEEEEEE
Q psy1672 340 NRAGIADANFTLQV 353 (600)
Q Consensus 340 N~~G~~~~~v~L~V 353 (600)
|..|..+..+.|.|
T Consensus 83 n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 83 NMFAMDQGTATLHV 96 (98)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred CCCCccccEEEEEE
Confidence 99999988888877
No 184
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.91 E-value=9.3e-10 Score=105.43 Aligned_cols=79 Identities=19% Similarity=0.346 Sum_probs=63.8
Q ss_pred ccccccccceeeeEeecC-CCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 264 VEAVSSENATVVCRVDSI-PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
..+.+|+.+.|.|.+.|. |.|+|.|+++++.+.....+ ...+ ....|.|.+++.+|.|.|+|.|.|..
T Consensus 126 ~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~-------~~~~----~~~~L~I~~v~~~D~G~Y~C~a~N~~ 194 (207)
T 3rbs_A 126 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKH-------DFKD----GICTLLITEFSKKDAGIYEVILKDDR 194 (207)
T ss_dssp EEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCC-------CCSS----EEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred cEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCce-------EcCC----CEEEEEECCCCcccCEEEEEEEEcCC
Confidence 456789999999999998 99999999999988653311 0011 23469999999999999999999999
Q ss_pred CceeEEEEEEE
Q psy1672 343 GIADANFTLQV 353 (600)
Q Consensus 343 G~~~~~v~L~V 353 (600)
|.++..+.|..
T Consensus 195 G~~~~~~~L~~ 205 (207)
T 3rbs_A 195 GKDKSRLKLVD 205 (207)
T ss_dssp EEEEEEEEECC
T ss_pred CEEEEEEEEec
Confidence 99988877753
No 185
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.90 E-value=3.9e-09 Score=93.75 Aligned_cols=98 Identities=13% Similarity=0.201 Sum_probs=68.8
Q ss_pred cccCcccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccC----ccceEEEeeCCceeeeeeEEEe
Q psy1672 249 DDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFS----SYQRIFVIEQGEYERKSSLVLT 324 (600)
Q Consensus 249 ~~~~C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~----~~~~~~~~~~g~~~~~s~L~I~ 324 (600)
....+.|.+...+..+.+..|+.++|.|.+.|.|.|.|.|++++..+....... ...+..+.........+.|.|.
T Consensus 16 ~~~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 95 (137)
T 3qr2_A 16 PRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISID 95 (137)
T ss_dssp -----CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEEC
T ss_pred CCCCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEEC
Confidence 344567888888888899999999999999999999999999776553221000 0112222211111234689999
Q ss_pred cCCCCCCeEEEEEEecCCCcee
Q psy1672 325 NAQESDSGRFYCVAENRAGIAD 346 (600)
Q Consensus 325 ~v~~~d~G~Y~C~a~N~~G~~~ 346 (600)
+++..|+|.|+|.|.|..|...
T Consensus 96 ~v~~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 96 TLVEEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp SCCGGGCEEEEEEEECCTTSSS
T ss_pred CCCcccCEEEEEEEEecCCccc
Confidence 9999999999999999999864
No 186
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.90 E-value=8.2e-09 Score=86.76 Aligned_cols=89 Identities=18% Similarity=0.371 Sum_probs=66.6
Q ss_pred cccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
+...+..+.+..|+.++|.|.+.+ |.+.+.|+++++.+.....+ +..+..++. ...|.|.+++..|.|.|+|
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~----~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C 81 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKS----RYRIRVEGK---KHILIIEGATKADAAEYSV 81 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTC----SEEEEEETT---EEEEEEEEECTTTCSEEEE
T ss_pred eeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCce----EEEEEEcCC---EEEEEECCCCcccCEEEEE
Confidence 344456678889999999999987 77999999999887654311 333333331 3479999999999999999
Q ss_pred EEecCCCceeEEEEEEEEEcc
Q psy1672 337 VAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 337 ~a~N~~G~~~~~v~L~V~~~~ 357 (600)
.|.| ....+.|.|...+
T Consensus 82 ~a~n----~~~~~~l~V~~~p 98 (103)
T 1x44_A 82 MTTG----GQSSAKLSVDLKS 98 (103)
T ss_dssp EETT----EEEEEEEEEECCC
T ss_pred EECC----CcEEEEEEEeCCC
Confidence 9998 4666777776544
No 187
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.4e-09 Score=90.25 Aligned_cols=81 Identities=19% Similarity=0.348 Sum_probs=62.8
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
+.+...+....+..|+.++|.|.+.+.|.+.+.|+++++.+.... ...|.|.+++..|.|.|
T Consensus 11 ~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~------------------~~~L~i~~v~~~d~G~Y 72 (96)
T 2ens_A 11 VQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP------------------SPVLILPEIGPQDQGTY 72 (96)
T ss_dssp CCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCC------------------CSEEEEESCCTTTCEEE
T ss_pred CEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCC------------------CCEEEECCCCcccCEEE
Confidence 444455566778899999999999999999999999887665321 13799999999999999
Q ss_pred EEEEecCCCceeEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V 353 (600)
+|.|.|..|....+..+.+
T Consensus 73 ~C~a~n~~~~~~~s~~~~v 91 (96)
T 2ens_A 73 SCVATHSSHGPQESRAVSI 91 (96)
T ss_dssp ECEECCSSCCCEECCCEEE
T ss_pred EEEEEeCCCCcEEEEEEEE
Confidence 9999997665444433333
No 188
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=4.8e-09 Score=88.08 Aligned_cols=90 Identities=17% Similarity=0.320 Sum_probs=68.3
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.+.|.|.+.+ |.+.+.|+++++.+.... +..+..++. ...|.|.+++..|.|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~------~~~~~~~~~---~~~L~I~~v~~~D~G~ 77 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQ------KYDVVCEGT---MAMLVIRGASLKDAGE 77 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSS------SEEEEEETT---EEEEEESSCCTTTCSE
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCC------CEEEEECCC---EEEEEECCCCcccCEE
Confidence 345555566788899999999999997 888999999998775432 344443332 3479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|.|.| ....+.|.|...+
T Consensus 78 Y~C~a~n----~~~~~~l~V~~~p 97 (103)
T 2edf_A 78 YTCEVEA----SKSTASLHVEEKA 97 (103)
T ss_dssp EEEECSS----CEEEEEEEECCCS
T ss_pred EEEEEcc----CCcEEEEEEeCCC
Confidence 9999999 3666777775543
No 189
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.88 E-value=2.4e-09 Score=92.18 Aligned_cols=99 Identities=23% Similarity=0.374 Sum_probs=68.7
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..|.+...+..+.+..|+.++|.|.+.|.|.|.+.|++++..+....... ..+.....++.. ....+.+.+++..|.|
T Consensus 8 ~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~i~~~~v~~~D~G 85 (117)
T 2v9t_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDP-RSHRMLLPSGSL-FFLRIVHGRKSRPDEG 85 (117)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCS-SCSEEECTTSCE-EESSCCCBTTBCSSCE
T ss_pred CCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCC-cceeEEecCCcE-EEEEEEeCCCCcCcCE
Confidence 45666666777888999999999999999999999999998776443111 112223333311 1122334467899999
Q ss_pred EEEEEEecCCCceeE-EEEEEE
Q psy1672 333 RFYCVAENRAGIADA-NFTLQV 353 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~-~v~L~V 353 (600)
.|+|.|.|..|.... .+.+.+
T Consensus 86 ~Y~C~a~N~~G~~~s~~~~l~~ 107 (117)
T 2v9t_A 86 VYVCVARNYLGEAVSHDASLEV 107 (117)
T ss_dssp EEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEEeCccceEeeeEEEEh
Confidence 999999999998754 355555
No 190
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.88 E-value=6.5e-09 Score=97.16 Aligned_cols=94 Identities=27% Similarity=0.421 Sum_probs=71.6
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEE--cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCC-CCCC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYW--NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ-ESDS 331 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~--~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~-~~d~ 331 (600)
|.+...+....+..|+.+.|.|.+.|.|.+.+.|++ ++..+.... ...++.+..++. .+.|.|.+++ ..|.
T Consensus 93 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~---~~~~~~~~~~~~---~~~L~i~~~~~~~d~ 166 (190)
T 2wv3_A 93 PDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISN---SSGRFFIINKEN---YTELNIVNLQITEDP 166 (190)
T ss_dssp CEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCC---TTSCEEEEECSS---EEEEEECSCCTTTSC
T ss_pred CcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeec---CCCeEEEecCCC---eeEEEEEeccccCCC
Confidence 444444455667889999999999999999999999 676654221 123444444332 3479999999 7999
Q ss_pred eEEEEEEecCCCceeEEEEEEEE
Q psy1672 332 GRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|.|+|.|.|..|.....+.|.|.
T Consensus 167 G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 167 GEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEEEEEecCCcceeEEEEEEE
Confidence 99999999999999988888774
No 191
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.87 E-value=4.8e-09 Score=86.49 Aligned_cols=68 Identities=34% Similarity=0.627 Sum_probs=53.6
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
+.+..|+.+.|.|.+.+ |.+.+.|+++|+.+.... ++.+..++. ...|.|.+++.+|.|.|+|.|.|.
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~------~~~i~~~~~---~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESD------FVVLENEGP---HRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCS------SCEEEEETT---EEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeee------eeeEEecCC---eEEEEeCCCChhhcEEEEEEEcce
Confidence 45678999999999965 888999999998886543 333333332 247999999999999999999775
No 192
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.87 E-value=4.2e-09 Score=89.05 Aligned_cols=89 Identities=22% Similarity=0.324 Sum_probs=66.7
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.+.|.|.+.+.|.+ +.|+++++.+.... ++.+..++. ...|.|.+++.+|.|.
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~------~~~~~~~~~---~~~L~I~~v~~~D~G~ 77 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSK------RITISHVGR---FHKLVIDDVRPEDEGD 77 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCS------SCEEEEETT---EEEEEESSCCTTTCSC
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCC------CEEEEEeCC---EEEEEECCCCcCCCEE
Confidence 4555666677889999999999999998888 99999998775433 223333331 2479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|+|.|.|.. ....+.|.|.
T Consensus 78 Y~C~a~n~~--~~~~~~l~V~ 96 (106)
T 2dlt_A 78 YTFVPDGYA--LSLSAKLNFL 96 (106)
T ss_dssp EEEEEETSC--CCCCBCEEEE
T ss_pred EEEEEccCC--ceEEEEEEEE
Confidence 999999983 3344455554
No 193
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=8.2e-09 Score=86.79 Aligned_cols=88 Identities=25% Similarity=0.451 Sum_probs=64.4
Q ss_pred ccccccccc---ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 255 PEIRMDSRY---VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 255 p~i~~~~~~---~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
|.+...+.. +.+..|+.++|.|.+.+.|.+ +.|+++++.+.... +..+..++ ....|.|.+++..|+
T Consensus 8 P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~------~~~~~~~~---~~~~L~I~~~~~~D~ 77 (104)
T 2e6p_A 8 PVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESE------LLVVKMDG---RKHRLILPEAKVQDS 77 (104)
T ss_dssp SCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBT------TBEEEEET---TEEEEEESSCCTTTC
T ss_pred CCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCC------CEEEEeCC---CEEEEEECCCChhhC
Confidence 344444444 678899999999999999988 99999998776433 22232222 134799999999999
Q ss_pred eEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 332 GRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
|.|+|.|.|..+ .+.|.|...
T Consensus 78 G~Y~C~a~n~~~----~~~l~V~~~ 98 (104)
T 2e6p_A 78 GEFECRTEGVSA----FFGVTVQDP 98 (104)
T ss_dssp EEEEEECSSCCC----CEEEEEECC
T ss_pred EEEEEEECCceE----EEEEEEcCC
Confidence 999999999854 455555544
No 194
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.84 E-value=1.3e-08 Score=84.11 Aligned_cols=85 Identities=18% Similarity=0.337 Sum_probs=64.3
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
.+...+..+.+..|+.+.|.|.+ +.|.+.+.|++++..+.... ++.+..++. ...|.|.+++..|.|.|+
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~------~~~~~~~~~---~~~L~I~~v~~~D~G~Y~ 79 (95)
T 2k1m_A 10 AFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASN------KYGLATEGT---RHTLTVREVGPADQGSYA 79 (95)
T ss_dssp CCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSST------TCEEEEETT---EEEEEESSCCTTCCSEEE
T ss_pred eeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCC------cEEEEEcCC---EEEEEEcCCCcccCEEEE
Confidence 34444567788999999999999 88889999999998776433 223333332 247999999999999999
Q ss_pred EEEecCCCceeEEEEEEEE
Q psy1672 336 CVAENRAGIADANFTLQVT 354 (600)
Q Consensus 336 C~a~N~~G~~~~~v~L~V~ 354 (600)
|.| |.....+.|.|.
T Consensus 80 C~a----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 80 VIA----GSSKVKFDLKVI 94 (95)
T ss_dssp EEE----TTEEEEEEEEEE
T ss_pred EEE----CCceEEEEEEEe
Confidence 999 556666777663
No 195
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.82 E-value=1.1e-08 Score=84.61 Aligned_cols=80 Identities=25% Similarity=0.329 Sum_probs=64.8
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+....+..|+.+.|.|.+.+ .|.+.|+++|..+.... +..+ .+ +.|.|.+++..|+|.|+|.|.|
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~------~~~~-~~------~~L~i~~~~~~D~G~Y~C~a~n 72 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNN------RTVL-IG------EYLQIKGATPRDSGLYACTAAR 72 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCS------SEEE-ET------TEEEECSCCGGGCEEEEEEEEC
T ss_pred CCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCc------eEEE-eC------CEEEECcCCcccCEEEEEEEcc
Confidence 45677889999999999987 57999999998775432 2222 12 3799999999999999999999
Q ss_pred CCCceeEEEEEEEEE
Q psy1672 341 RAGIADANFTLQVTY 355 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~ 355 (600)
..|.....+.|.|..
T Consensus 73 ~~g~~~~~~~l~V~~ 87 (95)
T 4hwu_A 73 TVDSETWIFMVNVTD 87 (95)
T ss_dssp SSCEEEEEEEEEECC
T ss_pred CCCcEEEEEEEEEeC
Confidence 999888888888753
No 196
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.81 E-value=2e-08 Score=83.83 Aligned_cols=89 Identities=19% Similarity=0.274 Sum_probs=66.5
Q ss_pred cccccccccc-ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRY-VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~-~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...... ..+..|+.++|.|.+. .|.+.+.|+++++.+.... +..+..++. ...|.|.+++..|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~------~~~~~~~~~---~~~L~I~~~~~~D~G 76 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPST------KYIFEHKGC---QRILFINNCQMTDDS 76 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBT------TEEEEEETT---EEEEEEEEECTTTCC
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCC------CEEEEecCC---EEEEEEcCCCcCcCE
Confidence 4555544444 5778999999999998 7899999999998775432 333433332 237999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEc
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
.|+|.| |.....+.|.|...
T Consensus 77 ~Y~C~a----g~~~~~~~l~V~~~ 96 (100)
T 2yuv_A 77 EYYVTA----GDEKCSTELFVRSG 96 (100)
T ss_dssp EEEEEE----TTEEEEEEEEECCS
T ss_pred EEEEEE----CCceEEEEEEEecC
Confidence 999999 66777778877543
No 197
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=5.1e-09 Score=87.67 Aligned_cols=90 Identities=18% Similarity=0.296 Sum_probs=64.4
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+..+.+..|+.++|.|.+.+.| +.+.|+++++.+.....+. .++.+..++. ...|.|.+++.+|+|.|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~--~~~~~~~~~~---~~~L~I~~~~~~D~G~Y 82 (101)
T 2edk_A 9 VLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFK--ARYRFKKDGK---RHILIFSDVVQEDRGRY 82 (101)
T ss_dssp CCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSS--CCCEEEECSS---EEEEECSSCCGGGCSBE
T ss_pred CEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcc--eeEEEEECCC---EEEEEECCCChhhCEEE
Confidence 3444455667889999999999999988 9999999998776543110 0233333332 34799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~ 354 (600)
+|.|.|. ...+.|.|.
T Consensus 83 ~C~a~n~----~~~~~l~V~ 98 (101)
T 2edk_A 83 QVITNGG----QCEAELIVE 98 (101)
T ss_dssp EEECSSC----EECCBEEEE
T ss_pred EEEEcCC----cEEEEEEEe
Confidence 9999983 333445553
No 198
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.80 E-value=4.1e-09 Score=100.65 Aligned_cols=88 Identities=17% Similarity=0.196 Sum_probs=60.6
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
.+...+....+.+|+.++|.|.+.|.|.|.|.|++++..+.... ....++.+..+|.. ..+.|.+++.+|.|.|+
T Consensus 108 ~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~--~~~~r~~~~~~g~l---~il~i~~v~~~D~G~Yt 182 (203)
T 4fa8_A 108 TLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPT--AANGGVMKEKDGSL---SVAVDLSLPKPWHLPVT 182 (203)
T ss_dssp EEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC--------------CCEECTTSCE---EEEEEEEECSSCCCCEE
T ss_pred eeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcc--cccceEEEeCCCCE---EEEEECCCCHHHCEEEE
Confidence 33334566778899999999999999999999998654332211 11234455555532 24567799999999999
Q ss_pred EEEecCCCceeEE
Q psy1672 336 CVAENRAGIADAN 348 (600)
Q Consensus 336 C~a~N~~G~~~~~ 348 (600)
|+|+|.+|.+++.
T Consensus 183 C~A~N~~G~a~~v 195 (203)
T 4fa8_A 183 CVGKNDKEEAHGV 195 (203)
T ss_dssp EEEESSSCEEEEE
T ss_pred EEEEcCCCEEEEE
Confidence 9999999988753
No 199
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=1.1e-08 Score=86.41 Aligned_cols=89 Identities=21% Similarity=0.313 Sum_probs=66.6
Q ss_pred ccccccccccccccccceeeeEeecCCC-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPP-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
.+......+.+.+|+.++|.|.+.+.|. +.+.|+++|+.+.... ++.+..++. ...|.|.+++.+|+|.|
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~------r~~~~~~~~---~~~L~I~~v~~~D~G~Y 80 (104)
T 2eny_A 10 GITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSS------RFQATRQGR---KYILVVREAAPSDAGEV 80 (104)
T ss_dssp CCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCS------SCEEEEETT---EEEEEECSCCTTTCSCE
T ss_pred EEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCC------CEEEEEcCC---EEEEEECCCCHHHCEEE
Confidence 4444556788899999999999998875 4899999998776433 333333332 34799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEEEcc
Q psy1672 335 YCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
+|.|.| ....+.|.|...+
T Consensus 81 ~C~a~~----~~~~a~L~V~~~p 99 (104)
T 2eny_A 81 VFSVRG----LTSKASLIVRERS 99 (104)
T ss_dssp EEEETT----EEEEECEEEECCC
T ss_pred EEEECC----eeEEEEEEEeCCC
Confidence 999865 4567777776544
No 200
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.79 E-value=1.7e-08 Score=96.53 Aligned_cols=96 Identities=28% Similarity=0.474 Sum_probs=75.0
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+ ..+..+.+..|+.+.|.|.+.|.|.|.|.|+++|..+.... ..++.+...+ ..+.|.|.+++..|.|.
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~----~~~~~~~~~~---~~~~L~i~~~~~~d~G~ 90 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSN----YSNIKIYNTP---SASYLEVTPDSENDFGN 90 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSS----SCSEEEEEET---TEEEEEECCCSGGGCEE
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCC----CccEEEecCC---CeeEEEEecCChhhCeE
Confidence 3444 34556788899999999999999999999999998876542 1233333322 13589999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|.|.|..|.....+.+.|...+
T Consensus 91 Y~C~a~n~~g~~~~~~~l~v~~~P 114 (215)
T 3mtr_A 91 YNCTAVNRIGQESLEFILVQADTP 114 (215)
T ss_dssp EEEEEECSSCEEEEEEEEEECCCC
T ss_pred EEEEEEECCCceEEEEEEEECCCC
Confidence 999999999999888888875443
No 201
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.78 E-value=1.9e-08 Score=84.30 Aligned_cols=90 Identities=23% Similarity=0.396 Sum_probs=68.3
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.++|.|.+.+.|.+ +.|+++++.+.... +..+..++. ...|.|.+++.+|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~------~~~~~~~~~---~~~L~I~~v~~~D~G~ 77 (103)
T 2e7b_A 8 PVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGD------KYSLRQEGA---MLELVVRNLRPQDSGR 77 (103)
T ss_dssp CCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSS------SEEEEECSS---EEEEEECSCCTTTCCC
T ss_pred CCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCC------cEEEEEcCC---EEEEEEccCCcccCEE
Confidence 4555556677889999999999999999988 99999988775322 444444442 3469999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|. .|.....+.|.|...+
T Consensus 78 Y~C~----~g~~~~~~~l~V~~~p 97 (103)
T 2e7b_A 78 YSCS----FGDQTTSATLTVTALP 97 (103)
T ss_dssp EEEE----CSSCBCCBCEEEECCC
T ss_pred EEEE----ECCcEEEEEEEEEecc
Confidence 9998 5556666777775543
No 202
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=3.9e-08 Score=82.38 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=69.9
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
+.|.+...+..+.+.+|+.++|.|.+ +.|.+.+.|+++++.+.... +..+..++ ....|.|.+++..|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~------~~~~~~~~---~~~~L~I~~v~~~D~G 76 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASG------KHQPSQEG---LTLRLTISALEKADSD 76 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSS------SEEEEEET---TEEEEEEESCCTTTCS
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCC------eEEEEeCC---CEEEEEECCCCcccCE
Confidence 34556666677889999999999994 88999999999998776433 33333333 1237999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEccC
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYRGV 358 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~~~ 358 (600)
.|+|. .|.....+.|.|...+.
T Consensus 77 ~Y~C~----~g~~~~~~~l~V~~~p~ 98 (103)
T 2dku_A 77 TYTCD----IGQAQSRAQLLVQGRRS 98 (103)
T ss_dssp EEEEE----CSSCBCCEEEEEECSCC
T ss_pred EEEEE----eCCceEEEEEEEeCccC
Confidence 99998 67777778888866543
No 203
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.76 E-value=6.7e-08 Score=82.49 Aligned_cols=88 Identities=19% Similarity=0.367 Sum_probs=67.0
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+.+|+.+.|.|.+.+. |.+.|++++..+.... +..+..++. ...|.|.+++.+|.|.|
T Consensus 20 p~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~------~~~~~~~~~---~~~L~I~~v~~~D~G~Y 88 (113)
T 2edh_A 20 IKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGD------RHSLRQDGA---RCELQIRGLVAEDAGEY 88 (113)
T ss_dssp CCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSS------SEEEEEETT---EEEEEECSCCSTTCEEE
T ss_pred CcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCC------cEEEEECCC---EEEEEECCCChhhCEEE
Confidence 455555667788999999999999764 7899999998775432 344444332 34799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEEEcc
Q psy1672 335 YCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
+|.| |.....+.|.|...+
T Consensus 89 ~C~a----~~~~~~~~l~V~~~p 107 (113)
T 2edh_A 89 LCMC----GKERTSAMLTVRAMP 107 (113)
T ss_dssp EEEE----TTEEEEEEEEECCCC
T ss_pred EEEe----CCCCEEEEEEEeCCC
Confidence 9999 677788888886544
No 204
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.76 E-value=4.9e-10 Score=117.43 Aligned_cols=142 Identities=17% Similarity=0.130 Sum_probs=105.8
Q ss_pred CceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcccc-----CCCCCccEEEccCCCCCCCCcc----ccC
Q psy1672 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGAL-----DGLTNLIEIDLSDNLLTSIPSL----TFQ 120 (600)
Q Consensus 50 ~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f-----~~l~~L~~L~Ls~N~l~~l~~~----~f~ 120 (600)
.++.|+|++|.|.......+. ..+.+|+.|+|++|.|+......+ ...++|++|+|++|.|+..... .+.
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~-~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLL-PVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTH-HHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CceEEEecCCCCCHHHHHHHH-HHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 499999999998743222221 146789999999999976544444 3568999999999999753322 235
Q ss_pred CCCCCCEEEccCCCCCccC----cccccCCCCcceeeCCCCcCcccCh----hhhcCCCCCCEEEcCCCcCCCCCccccc
Q psy1672 121 SVRFLRDLNLARNPISKIE----KGAFQFVPGLVKLDMSESRLEHISP----EAFTGAKSLESIKLNGNRLSHFPVRSVE 192 (600)
Q Consensus 121 ~l~~L~~L~Ls~N~i~~l~----~~~~~~l~~L~~L~Ls~n~l~~i~~----~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 192 (600)
.+++|++|+|++|.|+... ...+...++|+.|+|++|.|..... ..+...++|+.|+|++|.|.......+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 6788999999999987643 3446677899999999999987543 3345678999999999999865544443
No 205
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.74 E-value=2.4e-08 Score=93.17 Aligned_cols=90 Identities=22% Similarity=0.366 Sum_probs=70.7
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... +..+..++. ...|.|.+++..|.|.|
T Consensus 104 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~------~~~~~~~~~---~~~L~i~~~~~~d~G~Y 174 (194)
T 2a38_A 104 PNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSL------DFQISQEGD---LYSLLIAEAYPEDSGTY 174 (194)
T ss_dssp EEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSS------SEEEEEETT---EEEEEEEEECGGGCEEE
T ss_pred CEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCC------cEEEEEcCC---EEEEEECCCChhcCeEE
Confidence 334444455678889999999999999999999999998876433 233333332 23799999999999999
Q ss_pred EEEEecCCCceeEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V 353 (600)
+|.|.|..|.....+.|.|
T Consensus 175 ~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 175 SVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEEETTEEEEEEEEEEE
T ss_pred EEEEEeCCCceEEEEEEEE
Confidence 9999999999888888776
No 206
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.74 E-value=1.6e-08 Score=102.58 Aligned_cols=81 Identities=20% Similarity=0.240 Sum_probs=65.7
Q ss_pred cccccccccceeeeEeecCCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
...+..|+.++|.|.+.|.|.| .|.|++++..+.... ...+ +.|.|.+++..|+|.|+|.|.|.
T Consensus 226 ~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---------~~~~------~~L~i~~v~~~d~G~Y~C~a~N~ 290 (313)
T 4fqp_A 226 NNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---------VAQG------AQLLIRPVDKPINTTLICNVTNA 290 (313)
T ss_dssp SCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---------EEET------TEEEECCCSSCCEEEEEEEEECS
T ss_pred ceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---------EEeC------CEEEECcCChhhCEEEEEEEEeC
Confidence 3445678899999999999998 699999987765322 1122 37999999999999999999999
Q ss_pred CCceeEEEEEEEEEccC
Q psy1672 342 AGIADANFTLQVTYRGV 358 (600)
Q Consensus 342 ~G~~~~~v~L~V~~~~~ 358 (600)
.|..+..+.|.|.+.|+
T Consensus 291 ~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 291 LGARQAELTVQVKEGPP 307 (313)
T ss_dssp SCEEEEEEEEEEECCC-
T ss_pred CCcEEEEEEEEEEeCCC
Confidence 99999999999976654
No 207
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.74 E-value=9.2e-09 Score=89.77 Aligned_cols=96 Identities=10% Similarity=0.201 Sum_probs=67.6
Q ss_pred cccccccccccccceeeeEeecCCCCeeEEEEcCeeccC-C-cccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLN-N-TAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~-~-~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
..+..+.+.+|+.++|.|.+.+.|.+.+.|++++..+.. . .......++.+... ......|.|.+++.+|+|.|+|
T Consensus 6 ~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~L~I~~v~~~DsG~Y~C 83 (124)
T 3rbg_A 6 NHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH--SANQLSITVPNVTLQDEGVYKC 83 (124)
T ss_dssp CSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEE--ETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeC--CCCEEEEEECCCChHHCEEEEE
Confidence 345667889999999999999999999999975442211 0 00001122222211 1124689999999999999999
Q ss_pred EEecCCCceeEEEEEEEEEcc
Q psy1672 337 VAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 337 ~a~N~~G~~~~~v~L~V~~~~ 357 (600)
.|.|. |.....+.|.|...+
T Consensus 84 ~a~n~-g~~~~~~~l~V~~~P 103 (124)
T 3rbg_A 84 LHYSD-SVSTKEVKVIVLATM 103 (124)
T ss_dssp EEESS-SEEEEEEEEEEECC-
T ss_pred EEEcC-CCCcEEEEEEEEeCC
Confidence 99999 988888888886543
No 208
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.74 E-value=4.8e-08 Score=97.52 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=72.8
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++++...... .........+.....+.|.|.+++.+|.|.|
T Consensus 182 p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~----~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 257 (289)
T 3mjg_X 182 INVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLV----EPVTDFLLDMPYHIRSILHIPSAELEDSGTY 257 (289)
T ss_dssp CCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCC----CCEEEESCTTTTEEEEEEEESSCCSSCCEEE
T ss_pred CCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcc----cccccccCCcceEEEEEEEEcccChhhCcEE
Confidence 334444445668899999999999999999999998775433211 1111111221233457899999999999999
Q ss_pred EEEEecCCCceeEEEEEEEEEcc
Q psy1672 335 YCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
+|.|.|..|...+++.|.|...+
T Consensus 258 ~C~a~N~~G~~~~~~~l~v~~~~ 280 (289)
T 3mjg_X 258 TCNVTESVNDHQDEKAINITVVE 280 (289)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEC
T ss_pred EEEeecCCCCceeEEEEEEEEEe
Confidence 99999999999999999987654
No 209
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.73 E-value=4.7e-08 Score=92.59 Aligned_cols=85 Identities=24% Similarity=0.418 Sum_probs=69.2
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeC-CceeeeeeEEEecCCCCCCeEEEEEEe
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQ-GEYERKSSLVLTNAQESDSGRFYCVAE 339 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~-g~~~~~s~L~I~~v~~~d~G~Y~C~a~ 339 (600)
+....+..|+.+.|.|.+.|.|.|.+.|+++++.+.... +..+... + ..+.|.|.+++..|.|.|+|.|.
T Consensus 124 ~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~------~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~ 194 (212)
T 2r15_A 124 PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTD------HCNLKFEAG---RTAYFTINGVSTADSGKYGLVVK 194 (212)
T ss_dssp CSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCS------SEEEEEETT---TEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCC------CEEEEEcCC---CEEEEEEcCcchHHCeEEEEEEE
Confidence 345678889999999999999999999999998876543 2222222 2 13589999999999999999999
Q ss_pred cCCCceeEEEEEEEE
Q psy1672 340 NRAGIADANFTLQVT 354 (600)
Q Consensus 340 N~~G~~~~~v~L~V~ 354 (600)
|..|..+..+.|.|.
T Consensus 195 N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 195 NKYGSETSDFTVSVF 209 (212)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEEE
Confidence 999999988888875
No 210
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.73 E-value=5.8e-08 Score=90.88 Aligned_cols=94 Identities=21% Similarity=0.457 Sum_probs=74.0
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEe--eCCceeeeeeEEEecCCCCCC
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI--EQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~--~~g~~~~~s~L~I~~v~~~d~ 331 (600)
.|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|+++++.+.... .+..+. .++ ...|.|.+++..|.
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-----~~~~~~~~~~~----~~~L~i~~~~~~d~ 74 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG-----LKYRIQEFKGG----YHQLIIASVTDDDA 74 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCS-----SSEEEEEETTT----EEEEEECSCCGGGC
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCC-----CcEEEEEcCCC----EEEEEECcCCHHhC
Confidence 3555555677888999999999999999999999999998775422 122222 222 24799999999999
Q ss_pred eEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 332 GRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
|.|+|.|.|..|.....+.|.|...
T Consensus 75 G~Y~C~~~n~~g~~~~~~~l~V~~~ 99 (197)
T 2j8h_A 75 TVYQVRATNQGGSVSGTASLEVEVP 99 (197)
T ss_dssp SEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred EEEEEEEEECCCceeEEEEEEEcCC
Confidence 9999999999999888888888654
No 211
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.72 E-value=3.1e-08 Score=92.72 Aligned_cols=84 Identities=29% Similarity=0.387 Sum_probs=67.6
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEec-CCCCCCeEEEEEEec
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN-AQESDSGRFYCVAEN 340 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~-v~~~d~G~Y~C~a~N 340 (600)
....+..|+.+.|.|.+.|.|.+.+.|+++++.+.... +..+...+ ..+.|.|.+ ++..|.|.|+|.|.|
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~------~~~~~~~~---~~~~L~i~~~~~~~d~G~Y~C~a~N 182 (197)
T 2j8h_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNG------HYQVIVTR---SFTSLVFPNGVERKDAGFYVVCAKN 182 (197)
T ss_dssp EEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSS------SCEEEECS---SEEEEECTTCCCGGGCEEEEEEEEE
T ss_pred CeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCC------CEEEEEcC---CceEEEEeCCCCcccCEeEEEEEEe
Confidence 44567789999999999999999999999998776433 22222222 135899999 999999999999999
Q ss_pred CCCceeEEEEEEEE
Q psy1672 341 RAGIADANFTLQVT 354 (600)
Q Consensus 341 ~~G~~~~~v~L~V~ 354 (600)
..|..+..+.|.|.
T Consensus 183 ~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 183 RFGIDQKTVELDVA 196 (197)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEeEEEEEEEe
Confidence 99999888888874
No 212
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.72 E-value=1.5e-08 Score=94.07 Aligned_cols=81 Identities=33% Similarity=0.556 Sum_probs=66.5
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
...+..|+.+.|.|.+.|.|.+.+.|++++..+.... +..+..++ +.|.|.+++..|.|.|+|.|.|..
T Consensus 107 ~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~------~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~a~n~~ 175 (189)
T 2v5t_A 107 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE------KYILKGSN-----TELTVRNIINSDGGPYVCRATNKA 175 (189)
T ss_dssp EEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSS------SEEEETTT-----TEEEECSCCGGGCEEEEEEEEETT
T ss_pred cccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCC------cEEEecCC-----CEEEEcCCChhhCeeEEEEEEeCC
Confidence 4567789999999999999999999999998776433 22222222 379999999999999999999999
Q ss_pred CceeEEEEEEEE
Q psy1672 343 GIADANFTLQVT 354 (600)
Q Consensus 343 G~~~~~v~L~V~ 354 (600)
|.....+.|.|.
T Consensus 176 g~~~~~~~l~V~ 187 (189)
T 2v5t_A 176 GEDEKQAFLQVF 187 (189)
T ss_dssp EEEEEEEEEEEE
T ss_pred CceeEEEEEEEE
Confidence 999998888874
No 213
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.72 E-value=6.1e-08 Score=89.87 Aligned_cols=95 Identities=28% Similarity=0.474 Sum_probs=70.8
Q ss_pred ccccccccccccccccccceeeeEeecCC-CCeeEEEE---cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCC-C
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIP-PAAISWYW---NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ-E 328 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P-~p~i~W~~---~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~-~ 328 (600)
.|.+...+....+..|+.+.|.|.+.|.| .+.+.|++ ++..+.... ...++.+..++ ..+.|.|.+++ .
T Consensus 83 ~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~L~i~~v~~~ 156 (184)
T 3b5h_A 83 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNG---SESRFFVSSSQ---GRSELHIENLNME 156 (184)
T ss_dssp SCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTT---GGGTEEEEEET---TEEEEEECSCCTT
T ss_pred CCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecC---CCCEEEEEecC---CeeEEEEeecccc
Confidence 45555555556778899999999999999 79999999 444332211 12344444333 23579999999 9
Q ss_pred CCCeEEEEEEecCCCceeEEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
.|.|.|+|.|.|..|.....+.|.|.
T Consensus 157 ~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 157 ADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp TSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccCceEEEEEEeCCCcceEEEEEEEe
Confidence 99999999999999999988888773
No 214
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.71 E-value=2e-08 Score=105.27 Aligned_cols=81 Identities=32% Similarity=0.514 Sum_probs=67.6
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
.....+..|+.+.|.|.+.|.|.|.|.|+++|+.+.... ++.+ .++ .|.|.+++.+|.|.|+|.|.|
T Consensus 302 ~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~------~~~~-~~~------~L~i~~v~~~D~G~Y~C~A~N 368 (384)
T 3kld_A 302 INDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRD------RIQI-EQG------TLNITIVNLSDAGMYQCVAEN 368 (384)
T ss_dssp CCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBT------TEEE-ETT------EEEESSCCGGGCEEEEEEEEE
T ss_pred CCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCc------cEEE-eCC------EEEEeecChhhCEEEEEEEEe
Confidence 445667889999999999999999999999998875432 2222 223 799999999999999999999
Q ss_pred CCCceeEEEEEEEE
Q psy1672 341 RAGIADANFTLQVT 354 (600)
Q Consensus 341 ~~G~~~~~v~L~V~ 354 (600)
..|....++.|.|.
T Consensus 369 ~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 369 KHGVIFSSAELSVI 382 (384)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred CCceEEeceEEEEe
Confidence 99999999988873
No 215
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.71 E-value=5.5e-08 Score=90.70 Aligned_cols=95 Identities=24% Similarity=0.477 Sum_probs=75.5
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.... +..+..++ ....|.|.+++..|.|.
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~------~~~~~~~~---~~~~L~i~~~~~~d~G~ 77 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSR------KYKMSSDG---RTHTLTVMTEEQEDEGV 77 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCS------SEEEEESS---SEEEEEEECCSGGGCEE
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCc------cEEEEeCC---CEEEEEEecCCccCCEE
Confidence 4555566677888999999999999999999999999998775432 33333333 13479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|.|.|..|.....+.+.|...+
T Consensus 78 Y~C~~~n~~~~~~~~~~l~v~~~p 101 (197)
T 3lcy_A 78 YTCIATNEVGEVETSSKLLLQATP 101 (197)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEE
T ss_pred EEEEEECCCCceeEEEEEEEEcCC
Confidence 999999999998888888886543
No 216
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.70 E-value=6.6e-08 Score=81.74 Aligned_cols=90 Identities=20% Similarity=0.352 Sum_probs=66.6
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..|.+...+..+.+..|+.++|.|.+.+. |.+.|++++..+.... ++.+..++. ...|.|.+++.+|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~------~~~~~~~~~---~~~L~I~~v~~~D~G 75 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGG------RYSLKQDGT---RCELQIHDLSVADAG 75 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSS------SCEEEEETT---EEEEEESSCCTTTCS
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCC------CEEEEecCC---EEEEEECCCCcccCE
Confidence 45666666677889999999999999765 6899999988765432 333333331 246999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEcc
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
.|+|.|.| ....+.|.|...+
T Consensus 76 ~Y~C~a~n----~~~~~~l~V~~~p 96 (108)
T 2dm7_A 76 EYSCMCGQ----ERTSATLTVRALP 96 (108)
T ss_dssp EEEEEETT----EEEEEECEEECCC
T ss_pred EEEEEEcC----CEEEEEEEEecCC
Confidence 99999955 5666777776544
No 217
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.69 E-value=5.4e-08 Score=96.75 Aligned_cols=91 Identities=21% Similarity=0.408 Sum_probs=71.8
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++++.+.... +..+..++ ..+.|.|.+++..|.|.
T Consensus 192 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~------~~~~~~~~---~~~~L~i~~v~~~d~G~ 262 (284)
T 2rik_A 192 PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGK------KYKIMSEN---FLTSIHILNVDSADIGE 262 (284)
T ss_dssp CCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTT------TEEEEEET---TEEEEEECSCCGGGCEE
T ss_pred CCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCC------CEEEEEcC---CEEEEEEcCCCcccCEE
Confidence 3444444555677889999999999999999999999998876543 22232222 13479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V 353 (600)
|+|.|.|..|.....+.|.|
T Consensus 263 Y~C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 263 YQCKASNDVGSYTCVGSITL 282 (284)
T ss_dssp EEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEeCCCceeEEEEEEE
Confidence 99999999999998888877
No 218
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.69 E-value=4.6e-08 Score=91.02 Aligned_cols=90 Identities=26% Similarity=0.340 Sum_probs=65.7
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.... ..+.....++ .|.|.+++..|.|.|
T Consensus 97 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~----~~~~~~~~~~------~L~i~~v~~~d~G~Y 166 (189)
T 2v44_A 97 LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTIS----DNRFAMLANN------NLQILNINKSDEGIY 166 (189)
T ss_dssp CEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECC----CTTEEECTTS------CEEETTCCGGGCEEE
T ss_pred CceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccC----CCCEEEecCC------cEEEEEcCcccCeEE
Confidence 333334445667899999999999999999999999887664321 1233333333 799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~ 354 (600)
+|.|.|..|.......+.|.
T Consensus 167 ~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 167 RCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp EEEEEETTTTEEEEEEEEEE
T ss_pred EEEEEccccCceeeeeEEEE
Confidence 99999999877665555553
No 219
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=8.3e-08 Score=81.75 Aligned_cols=80 Identities=28% Similarity=0.477 Sum_probs=61.5
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
+.+..|+.+.|.|.+. .|.+.+.|+++++.+.... +..+..++. ...|.|.+++.+|.|.|+|.|.|
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~------~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~a~n--- 89 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESP------ALLLQKEDT---VRRLVLPAVQLEDSGEYLCEIDD--- 89 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBT------TBEEEECSS---EEEEEESSCCTTTCEEEEEESSS---
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCC------CEEEEECCC---EEEEEECCCCcccCEEEEEEEec---
Confidence 5677899999999995 7889999999998776432 223333331 24799999999999999999999
Q ss_pred ceeEEEEEEEEEcc
Q psy1672 344 IADANFTLQVTYRG 357 (600)
Q Consensus 344 ~~~~~v~L~V~~~~ 357 (600)
.+..+.|.|...+
T Consensus 90 -~~~~~~l~V~~~p 102 (113)
T 2cpc_A 90 -ESASFTVTVTEPP 102 (113)
T ss_dssp -CEEEEEEEEECCC
T ss_pred -CcEEEEEEEecCC
Confidence 4567777776544
No 220
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.68 E-value=5.7e-08 Score=82.02 Aligned_cols=86 Identities=14% Similarity=0.259 Sum_probs=61.3
Q ss_pred ccccccccc-ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 255 PEIRMDSRY-VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 255 p~i~~~~~~-~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
|.+...... +.+..|+.+.|.|.+ +.|.+.+.|+++|+.+.... .++.+..++. ...|.|.+++.+|+|.
T Consensus 16 p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~-----~~~~~~~~~~---~~~L~I~~v~~~D~G~ 86 (104)
T 1pd6_A 16 TAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSG-----SKYIFESIGA---KRTLTISQCSLADDAA 86 (104)
T ss_dssp SSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCS-----SSSEEEEETT---EEEEEECSCSSSSCEE
T ss_pred CEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCC-----CeEEEEecCC---EEEEEECCCCcccCEE
Confidence 444443333 678899999999999 78999999999998876531 1223332332 2479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V 353 (600)
|+|.|.| ....+.|.|
T Consensus 87 Y~C~a~~----~~~~~~l~V 102 (104)
T 1pd6_A 87 YQCVVGG----EKCSTELFV 102 (104)
T ss_dssp EEEEETT----EEECCEEEE
T ss_pred EEEEECC----CcEEEEEEE
Confidence 9999954 344445554
No 221
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=2.7e-08 Score=85.41 Aligned_cols=90 Identities=26% Similarity=0.315 Sum_probs=67.3
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEe-eCCceeeeeeEEEecCCCCCCeEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI-EQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~-~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
.+...+..+.+.+|+.++|.|.+.+.|.|.+.|++++..+.....+ .+. .++ ....|.|.+++.+|+|.|
T Consensus 15 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~------~~~~~~~---~~~~L~I~~v~~~D~G~Y 85 (115)
T 2cr6_A 15 HIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELN------EIDAQPG---GYHVLTLRQLALKDSGTI 85 (115)
T ss_dssp EEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSC------CBCCBTT---TBCCBEECSCCTTTCEEE
T ss_pred eEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcE------EEEEcCC---CEEEEEEcCCChhhCEEE
Confidence 3444456778899999999999999999999999999887654321 111 111 124799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEEEccC
Q psy1672 335 YCVAENRAGIADANFTLQVTYRGV 358 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~~~~~ 358 (600)
+|. +|.....+.|.|...+.
T Consensus 86 ~C~----~g~~~~~~~L~V~~~p~ 105 (115)
T 2cr6_A 86 YFE----AGDQRASAALRVTEKPS 105 (115)
T ss_dssp EEE----ETTEECCEEEEEECCSS
T ss_pred EEE----ECCeeEEEEEEEECCCc
Confidence 999 45666677888876543
No 222
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.67 E-value=2.9e-08 Score=99.04 Aligned_cols=84 Identities=32% Similarity=0.534 Sum_probs=66.9
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
...+..|+.+.|.|.+.|.|.+.+.|+++|+.+.... +..+... .+.|.|.+++..|.|.|+|.|.|..
T Consensus 203 ~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~------~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~N~~ 271 (291)
T 2wim_A 203 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE------KYILKGS-----NTELTVRNIINSDGGPYVCRATNKA 271 (291)
T ss_dssp ECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTT------TEEECST-----TCEEEEESCCSTTCEEEEEEEEETT
T ss_pred cceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCc------cEEEcCC-----ccEEEEeeCCcccCEEEEEEEEECC
Confidence 4567789999999999999999999999998876533 2222222 2479999999999999999999999
Q ss_pred CceeEEEEEEEEEcc
Q psy1672 343 GIADANFTLQVTYRG 357 (600)
Q Consensus 343 G~~~~~v~L~V~~~~ 357 (600)
|..++.+.|.|...+
T Consensus 272 G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 272 GEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEEEEEC----
T ss_pred CceeeeEEEEEEEec
Confidence 999999999886543
No 223
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.67 E-value=6e-08 Score=96.95 Aligned_cols=100 Identities=23% Similarity=0.333 Sum_probs=71.0
Q ss_pred ccccccccccccccccccceeeeEeecCCCCe-eEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAA-ISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...+....+..|+.+.|.|.+.|.|.|. +.|++++..+.... .................+.|.|.+++..|.|
T Consensus 188 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G 265 (290)
T 2o26_X 188 IPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIA--QVKHNSWHRGDFNYERQETLTISSARVDDSG 265 (290)
T ss_dssp CCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECC--CEECCEEEEETTEEEEEEEEEESSCCSSSCE
T ss_pred CCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccce--eecccccccCceeeEEEEEEEEcCCCcccCe
Confidence 45554555556788999999999999999996 99999887631000 0001111112222334568999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEE
Q psy1672 333 RFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
.|+|.|.|..|..+..+.|.|..
T Consensus 266 ~Y~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 266 VFMCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp EEEEEEECSSCEEEEEEEECC--
T ss_pred EEEEEEeCCCCcEEEEEEEEEEe
Confidence 99999999999998888888754
No 224
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.66 E-value=5.1e-08 Score=90.76 Aligned_cols=89 Identities=24% Similarity=0.309 Sum_probs=67.9
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... ..+.....++ .|.|.+++..|.|.|
T Consensus 101 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~------~L~i~~~~~~d~G~Y 170 (191)
T 1epf_A 101 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKK----DVRFIVLSNN------YLQIRGIKKTDEGTY 170 (191)
T ss_dssp SEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGC----CTTEEECTTS------CEEETTCCGGGCEEE
T ss_pred ceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccC----CceEEEecCC------eEEECCCChhhCEEE
Confidence 444444556678899999999999999999999999998775322 2233333333 799999999999999
Q ss_pred EEEEecCCCceeEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V 353 (600)
+|.|.|..|.......+.|
T Consensus 171 ~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 171 RCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEEEEEGGGTEEEEEEEEE
T ss_pred EEEEEEecceeEEEEEEEE
Confidence 9999999976655555544
No 225
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.66 E-value=2.9e-08 Score=92.43 Aligned_cols=90 Identities=33% Similarity=0.534 Sum_probs=69.6
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... +..+..++ .|.|.+++..|.|.
T Consensus 100 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~------~~~~~~~~------~L~i~~~~~~d~G~ 167 (192)
T 2iep_A 100 KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENS------RIAVLESG------SLRIHNVQKEDAGQ 167 (192)
T ss_dssp EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCS------SEEECTTS------CEEESSCCGGGCEE
T ss_pred CCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCC------cEEEecCC------cEEEecCChhhCEE
Confidence 3444444556678889999999999999999999999998776433 33333333 79999999999999
Q ss_pred EEEEEecCCCce-eEEEEEEEEE
Q psy1672 334 FYCVAENRAGIA-DANFTLQVTY 355 (600)
Q Consensus 334 Y~C~a~N~~G~~-~~~v~L~V~~ 355 (600)
|+|.|.|..|.. +..+.|.|.+
T Consensus 168 Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 168 YRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp EEEEEEETTEEEECCCEEEEEEC
T ss_pred EEEEEEcCCCcEEEEEEEEEEEe
Confidence 999999999987 4457777754
No 226
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.66 E-value=6e-08 Score=83.65 Aligned_cols=104 Identities=22% Similarity=0.356 Sum_probs=70.2
Q ss_pred cCcccccccccccccccccccceeeeEeecCCC----CeeEEEEcCe-------ecc---CCc-----ccCccceEEEee
Q psy1672 251 FACKPEIRMDSRYVEAVSSENATVVCRVDSIPP----AAISWYWNGR-------LLL---NNT-----AFSSYQRIFVIE 311 (600)
Q Consensus 251 ~~C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~----p~i~W~~~g~-------~l~---~~~-----~~~~~~~~~~~~ 311 (600)
++|...+...+..+.+..|+.++|.|.+.+.+. +.+.|++.+. .+. ... ......+..+..
T Consensus 2 ~~~~~~v~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~ 81 (126)
T 1eaj_A 2 FARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTS 81 (126)
T ss_dssp CCSSCEESSSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECC
T ss_pred ccccEEEECCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEc
Confidence 455566666667788999999999999986654 3599998541 110 000 000122333332
Q ss_pred CCceeeeeeEEEecCCCCCCeEEEEEEecCCCceeEEEEEEEE
Q psy1672 312 QGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 312 ~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
+........|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 82 ~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 124 (126)
T 1eaj_A 82 NDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVL 124 (126)
T ss_dssp SCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccccCCeEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEE
Confidence 2111223579999999999999999999999888888888874
No 227
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.65 E-value=4.2e-08 Score=93.37 Aligned_cols=90 Identities=24% Similarity=0.382 Sum_probs=69.5
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... .+. ...+ +.|.|.+++..|.|.|
T Consensus 111 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-----~~~-~~~~------~~L~i~~v~~~d~G~Y 178 (212)
T 2yd1_A 111 PVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSN-----PRY-SLKD------GFLQIENSREEDQGKY 178 (212)
T ss_dssp CEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTS-----TTE-EEET------TEEEECSCCGGGCEEE
T ss_pred CeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCC-----CeE-EccC------CeEEEccCChhhCEEE
Confidence 444444555677889999999999999999999999998776432 122 1222 3799999999999999
Q ss_pred EEEEecCCCceeEE-EEEEEEEc
Q psy1672 335 YCVAENRAGIADAN-FTLQVTYR 356 (600)
Q Consensus 335 ~C~a~N~~G~~~~~-v~L~V~~~ 356 (600)
+|.|.|..|..... +.|.|...
T Consensus 179 ~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 179 ECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp EEEEEETTEEEECCCEEEEEEC-
T ss_pred EEEeecCCCceeEEEEEEEEEec
Confidence 99999999988654 78888654
No 228
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.65 E-value=1.8e-07 Score=89.02 Aligned_cols=96 Identities=28% Similarity=0.381 Sum_probs=73.8
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCC-CCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQE-SDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~-~d~G 332 (600)
.|.+...+....+..|+.++|.|.+.|.|.+.+.|+++++.+.... .+..+..... ..+.|.|.+++. .|.|
T Consensus 6 pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~-----~~~~~~~~~~--~~~~L~i~~v~~~~d~G 78 (212)
T 2yd1_A 6 PPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQ-----SRYTVLEQPG--GISILRIEPVRAGRDDA 78 (212)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTS-----TTEEEEEETT--TEEEEEESSCCTTTTCS
T ss_pred CCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCc-----ceeEEEEcCC--CeEEEEEEecCCCCcCc
Confidence 4556666777888999999999999999999999999998875221 2333322110 125799999999 9999
Q ss_pred EEEEEEecCCCc-eeEEEEEEEEEc
Q psy1672 333 RFYCVAENRAGI-ADANFTLQVTYR 356 (600)
Q Consensus 333 ~Y~C~a~N~~G~-~~~~v~L~V~~~ 356 (600)
.|+|.|.|..|. ....+.|.|...
T Consensus 79 ~Y~C~~~n~~g~~~~~~~~l~V~~~ 103 (212)
T 2yd1_A 79 PYECVAENGVGDAVSADATLTIYEG 103 (212)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEECT
T ss_pred eEEEEEEeCCCCeEEeeEEEEEecc
Confidence 999999999998 677788888543
No 229
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.64 E-value=6.3e-08 Score=90.29 Aligned_cols=94 Identities=22% Similarity=0.396 Sum_probs=72.7
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+.+|+.++|.|.+.+.|.+.+.|++++..+...... ..+.. ..++ ...|.|.+++..|.|.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~--~~~~~-~~~~----~~~L~i~~~~~~d~G~ 77 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLP--GVQIS-FSDG----RAKLTIPAVTKANSGR 77 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTST--TCEEE-EETT----EEEEEESSCCGGGCEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCC--ceEEE-eCCC----EEEEEECCCCcccCEE
Confidence 455566667788899999999999999999999999998877544310 11111 1222 3579999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|+|.|.|..|.....+.+.|.
T Consensus 78 Y~C~~~n~~~~~~~~~~l~v~ 98 (194)
T 2a38_A 78 YSLKATNGSGQATSTAELLVK 98 (194)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEcCCceEeEEEEEEEc
Confidence 999999999988888777775
No 230
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.64 E-value=5.8e-08 Score=92.48 Aligned_cols=94 Identities=27% Similarity=0.418 Sum_probs=66.9
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+..... ..++.....+ ..+.|.|.+++..|.|.|
T Consensus 109 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~---~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y 182 (212)
T 2yd6_A 109 PTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNN---NGRIKQLRSE---SIGALQIEQSEESDQGKY 182 (212)
T ss_dssp CEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC---------CCEEEEEET---TEEEEEECSCCGGGCEEE
T ss_pred ceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCC---CceEEEEecC---CeEEEEEcCCCcccCEEE
Confidence 3344444556678899999999999999999999999988764321 1233333222 135899999999999999
Q ss_pred EEEEecCCCcee-EEEEEEEE
Q psy1672 335 YCVAENRAGIAD-ANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~-~~v~L~V~ 354 (600)
+|.|.|..|... ..+.|.|.
T Consensus 183 ~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 183 ECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp EEEEEETTEEEECCCEEEEEE
T ss_pred EEEEECCCCccccccccEEEE
Confidence 999999999874 33555553
No 231
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.64 E-value=3.4e-08 Score=103.42 Aligned_cols=89 Identities=19% Similarity=0.327 Sum_probs=69.9
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
.+...+....+..|+.++|.|.+.|.|.+.+.|+++|..+..... ..+.. ..+ +.|.|.+++..|.|.|+
T Consensus 314 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~---~~~~~-~~~------~~L~i~~v~~~d~G~Y~ 383 (404)
T 3p3y_A 314 YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPP---NPNRE-VAG------DTIIFRDTQISSRAVYQ 383 (404)
T ss_dssp EEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCC---CTTEE-EET------TEEEESSCCSSCCCEEE
T ss_pred eeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCC---CceEE-ecC------CEEEEeecCHHHCEEEE
Confidence 333344556778899999999999999999999999988765431 11111 122 37999999999999999
Q ss_pred EEEecCCCceeEEEEEEEE
Q psy1672 336 CVAENRAGIADANFTLQVT 354 (600)
Q Consensus 336 C~a~N~~G~~~~~v~L~V~ 354 (600)
|.|.|..|.....+.|.|.
T Consensus 384 C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 384 CNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp EEEEETTEEEEEEEEEEEC
T ss_pred EEEEeCCCcEEEEEEEEEE
Confidence 9999999999998888873
No 232
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.63 E-value=1.1e-07 Score=90.58 Aligned_cols=95 Identities=22% Similarity=0.348 Sum_probs=73.4
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecC-CCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA-QESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v-~~~d~G 332 (600)
.|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++++.+.... .......++ ..+.|.|.++ +..|.|
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~-----~~~~~~~~~---~~~~L~i~~v~~~~d~G 77 (212)
T 2yd6_A 6 PPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQR-----FEVIEFDDG---SGSVLRIQPLRTPRDEA 77 (212)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTT-----EEEEEEGGG---TEEEEEECSCCTTTTCE
T ss_pred CCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCc-----eeEEEEcCC---CceEEEEeccCCCCCCe
Confidence 4556666677788999999999999999999999999998775432 111112221 1357999999 599999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEc
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
.|+|.|.|..|.....+.|.|...
T Consensus 78 ~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (212)
T 2yd6_A 78 IYECVASNNVGEISVSTRLTVLRE 101 (212)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECG
T ss_pred EEEEEEEcCCCcEEEEEEEEEecc
Confidence 999999999999888888888643
No 233
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.63 E-value=1.2e-07 Score=95.68 Aligned_cols=84 Identities=24% Similarity=0.429 Sum_probs=69.1
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeC-CceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQ-GEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~-g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
....+..|+.+.|.|.+.|.|.|.+.|+++++.+.... +..+... + ..+.|.|.+++..|.|.|+|.|.|
T Consensus 230 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~------~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N 300 (317)
T 2y25_A 230 DVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDD------HCNLKFEAG---RTAYFTINGVSTADSGKYGLVVKN 300 (317)
T ss_dssp SEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCS------SEEECCBTT---TEEEEEEBSCCSTTCEEEEEEEEE
T ss_pred ccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCC------cEEEEEcCC---CEEEEEECCCCHHHCEEEEEEEEe
Confidence 35677899999999999999999999999998875433 2333322 2 235899999999999999999999
Q ss_pred CCCceeEEEEEEEE
Q psy1672 341 RAGIADANFTLQVT 354 (600)
Q Consensus 341 ~~G~~~~~v~L~V~ 354 (600)
..|..+..+.|.|.
T Consensus 301 ~~g~~~~~~~l~V~ 314 (317)
T 2y25_A 301 KYGSETSDFTVSVF 314 (317)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEE
Confidence 99999999888885
No 234
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.62 E-value=1e-07 Score=83.31 Aligned_cols=95 Identities=21% Similarity=0.296 Sum_probs=64.9
Q ss_pred cccccccccccccceeeeEeecCCC---CeeEEEEcCee--c---------cCCcccCccceEEEeeCCceeeeeeEEEe
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIPP---AAISWYWNGRL--L---------LNNTAFSSYQRIFVIEQGEYERKSSLVLT 324 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P~---p~i~W~~~g~~--l---------~~~~~~~~~~~~~~~~~g~~~~~s~L~I~ 324 (600)
..+..+.+..|++++|.|.+...+. ..|.|++++.. + ..........|..+..+.......+|.|.
T Consensus 10 ~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~ 89 (125)
T 4gos_A 10 VTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK 89 (125)
T ss_dssp EEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEES
T ss_pred ccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEEC
Confidence 3445667788999999999864333 26899985421 0 00000111234444443322234589999
Q ss_pred cCCCCCCeEEEEEEecCCCceeEEEEEEE
Q psy1672 325 NAQESDSGRFYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 325 ~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V 353 (600)
+++.+|+|.|+|.+.|..|..++.+.|.|
T Consensus 90 ~v~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 90 NVQLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 99999999999999999999999999987
No 235
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.62 E-value=2.7e-08 Score=104.29 Aligned_cols=87 Identities=26% Similarity=0.400 Sum_probs=69.6
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
.+...+....+..|+.++|.|.+.|.|.+.+.|+++|+.+.... +..+..+ +.|.|.+++..|.|.|+
T Consensus 314 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~------~~~~~~~------~~L~i~~v~~~d~G~Y~ 381 (403)
T 3laf_A 314 WFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSD------YFQIVGG------SNLRILGVVKSDEGFYQ 381 (403)
T ss_dssp EEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSS------SEEEETT------TEEEESSCCGGGCEEEE
T ss_pred cEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCC------cEEEecC------ccEEEeccccccCEEEE
Confidence 33334455667889999999999999999999999998775433 2222222 37999999999999999
Q ss_pred EEEecCCCceeEEEEEEEE
Q psy1672 336 CVAENRAGIADANFTLQVT 354 (600)
Q Consensus 336 C~a~N~~G~~~~~v~L~V~ 354 (600)
|.|.|..|..+..+.|.|.
T Consensus 382 C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 382 CVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp EEEEETTEEEEEEEEEECC
T ss_pred EEEEcCCceEEEEEEEEEe
Confidence 9999999999998888774
No 236
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=8.5e-08 Score=80.14 Aligned_cols=81 Identities=28% Similarity=0.528 Sum_probs=60.9
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+.+..|+.++|.|.+. .|.+.+.|+++++.+.... +..+..++ ....|.|.+++..|.|.|+|.|.|
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~------~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~~- 87 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSS------KVRVEAVG---CTRRLVVQQAGQAEAGEYSCEAGG- 87 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCS------SEEEEEET---TEEEEEETTCCTTTCSCEEEEETT-
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCC------CEEEEEcC---CEEEEEECCCCcccCEEEEEEcCC-
Confidence 456788999999999998 8889999999998875432 33333333 124799999999999999999965
Q ss_pred CCceeEEEEEEEEEc
Q psy1672 342 AGIADANFTLQVTYR 356 (600)
Q Consensus 342 ~G~~~~~v~L~V~~~ 356 (600)
....+.|.|...
T Consensus 88 ---~~~~~~l~V~~p 99 (102)
T 2eo1_A 88 ---QQLSFRLQVAGQ 99 (102)
T ss_dssp ---EECCEEEEEESC
T ss_pred ---CcEEEEEEEeCC
Confidence 345566766543
No 237
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.62 E-value=1.2e-07 Score=94.16 Aligned_cols=94 Identities=22% Similarity=0.401 Sum_probs=74.1
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.++|.|.+.+.|.+.+.|++++..+..... .++.... ..+.|.|.+++..|.|.
T Consensus 5 pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~----~~~~~~~-----~~~~L~i~~v~~~d~G~ 75 (284)
T 2rik_A 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGN----YKMTLVE-----NTATLTVLKVTKGDAGQ 75 (284)
T ss_dssp CCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSS----EEEEEET-----TEEEEEESSCCGGGCEE
T ss_pred CCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCc----EEEEEcC-----CEEEEEEecCCcccCEE
Confidence 45555566778889999999999999999999999999987764331 1222111 13589999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
|+|.|.|..|..+..+.|.|...
T Consensus 76 Y~C~~~n~~g~~~~~~~l~V~~~ 98 (284)
T 2rik_A 76 YTCYASNVAGKDSCSAQLGVQEP 98 (284)
T ss_dssp EEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEECCceEEEEEEEEccCC
Confidence 99999999999888888888654
No 238
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.61 E-value=1.1e-07 Score=96.25 Aligned_cols=100 Identities=19% Similarity=0.292 Sum_probs=73.1
Q ss_pred ccccccccc-cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCC---ceeeeeeEEEecCCCC
Q psy1672 254 KPEIRMDSR-YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG---EYERKSSLVLTNAQES 329 (600)
Q Consensus 254 ~p~i~~~~~-~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g---~~~~~s~L~I~~v~~~ 329 (600)
.|.+...+. .+.+..|+.+.|.|.+.|.|.|.+.|+++|..+..........+..+.... .....+.|.|.+++..
T Consensus 208 ~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 287 (315)
T 1itb_B 208 RPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESR 287 (315)
T ss_dssp CCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGG
T ss_pred CCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHH
Confidence 444443333 357889999999999999999999999999988654322111122221111 1123468999999999
Q ss_pred C-CeEEEEEEecCCCceeEEEEEEE
Q psy1672 330 D-SGRFYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 330 d-~G~Y~C~a~N~~G~~~~~v~L~V 353 (600)
| .|.|+|.|.|..|.....+.|.|
T Consensus 288 d~~G~Y~C~a~N~~G~~~~~~~l~v 312 (315)
T 1itb_B 288 FYKHPFTCFAKNTHGIDAAYIQLIY 312 (315)
T ss_dssp GGTSCEEEEEECTTCCEEEEEEEEC
T ss_pred HcCCceEEEEecCCCceeEEEEEEe
Confidence 9 99999999999999999888876
No 239
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.61 E-value=1.1e-07 Score=88.67 Aligned_cols=85 Identities=19% Similarity=0.305 Sum_probs=67.9
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCC-CCCeEEEEEEec
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQE-SDSGRFYCVAEN 340 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~-~d~G~Y~C~a~N 340 (600)
....+..|+.+.|.|.+.+.|.+.+.|++++..+.... +..+...+ ..+.|.|.+++. +|.|.|+|.|.|
T Consensus 111 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~------~~~~~~~~---~~~~L~i~~~~~~~d~G~Y~C~a~n 181 (197)
T 3lcy_A 111 EKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSE------NITIENTE---HYTHLVMKNVQRKTHAGKYKVQLSN 181 (197)
T ss_dssp SEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS------SEEEEECS---SEEEEEESSCCHHHHCEEEEEEEEC
T ss_pred cceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCC------ceEEEEcC---CEEEEEEccccchhhCceEEEEEEc
Confidence 34566789999999999999999999999998876433 23333332 125799999994 899999999999
Q ss_pred CCCceeEEEEEEEEE
Q psy1672 341 RAGIADANFTLQVTY 355 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~ 355 (600)
..|..+..+.|.|..
T Consensus 182 ~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 182 VFGTVDAILDVEIQD 196 (197)
T ss_dssp SSCEEEEEEEEEEEC
T ss_pred CcCceEEEEEEEEec
Confidence 999999998888853
No 240
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.61 E-value=1.6e-07 Score=93.45 Aligned_cols=96 Identities=21% Similarity=0.303 Sum_probs=72.8
Q ss_pred ccccccccccccccccccceeeeEeec-CCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDS-IPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g-~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+.... ............+.|.|.+++..|.|
T Consensus 186 ~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~-------~~~~~~~~~~~~~~L~i~~v~~~d~G 258 (289)
T 3ejj_X 186 PPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPL-------NSDFQDNYYKKVRALSLNAVDFQDAG 258 (289)
T ss_dssp CCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCE-------EEEECSSSEEEEEEEEESSCCSSSCE
T ss_pred CCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccC-------CcccccceEEeeEEEEEEeecccCCE
Confidence 445555555566678999999999998 7899999999988775432 11112223334568999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEc
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
.|+|.|.|..|..++++.|.+...
T Consensus 259 ~Y~C~a~N~~G~~~~s~~L~~~~~ 282 (289)
T 3ejj_X 259 IYSCVASNDVGTRTATMNFQVVES 282 (289)
T ss_dssp EEEEEEECSSCEEEEEEEEECC--
T ss_pred EEEEEEEcCCCCccccEEEEEEec
Confidence 999999999999999999987543
No 241
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.61 E-value=7e-08 Score=100.45 Aligned_cols=82 Identities=29% Similarity=0.408 Sum_probs=67.7
Q ss_pred ccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEe
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAE 339 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~ 339 (600)
.+....+..|+.+.|.|.+.|.|.+.+.|+++|..+.... ++.+ .+ +.|.|.+++..|.|.|+|.|.
T Consensus 300 ~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~------~~~~-~~------~~L~i~~v~~~d~G~Y~C~a~ 366 (382)
T 1cs6_A 300 VITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQN------RIEV-SG------GELRFSKLVLEDSGMYQCVAE 366 (382)
T ss_dssp CCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCS------SEEE-ET------TEEEESSCCGGGCEEEEEEEE
T ss_pred CCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCc------eEEE-EC------CEEEECcCCcccCEEEEEEEE
Confidence 3445667889999999999999999999999998876432 2222 22 379999999999999999999
Q ss_pred cCCCceeEEEEEEEE
Q psy1672 340 NRAGIADANFTLQVT 354 (600)
Q Consensus 340 N~~G~~~~~v~L~V~ 354 (600)
|..|.....+.|.|.
T Consensus 367 N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 367 NKHGTVYASAELTVQ 381 (382)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCeEEEEEEEEEe
Confidence 999999998888873
No 242
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.60 E-value=9e-08 Score=89.55 Aligned_cols=87 Identities=23% Similarity=0.262 Sum_probs=68.1
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+........+..|+.+.|.|.+.+.|.+.+.|++++..+.... .+... .+.|.|.+++..|.|.|
T Consensus 114 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~--------~~~~~-----~~~L~i~~v~~~d~G~Y 180 (201)
T 3s97_C 114 ADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA--------EISTS-----GAVLKIFNIQLEDEGIY 180 (201)
T ss_dssp EEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTC--------EEETT-----TTEEEECSCCGGGCEEE
T ss_pred CceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCce--------eecCC-----CCEEEEccCChhhCEEE
Confidence 333333446677889999999999999999999999887654321 11111 23799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~ 354 (600)
+|.|.|..|..+..+.|.|.
T Consensus 181 ~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 181 ECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEecCCceeeeEEEEEe
Confidence 99999999999888888773
No 243
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.60 E-value=1.2e-07 Score=90.61 Aligned_cols=93 Identities=14% Similarity=0.194 Sum_probs=65.1
Q ss_pred ccccccccccceeeeEeecCCC--CeeEEEEcCeeccCCcccCccceEEEeeCC--ceeeeeeEEEecCCCCCCeEEEEE
Q psy1672 262 RYVEAVSSENATVVCRVDSIPP--AAISWYWNGRLLLNNTAFSSYQRIFVIEQG--EYERKSSLVLTNAQESDSGRFYCV 337 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~--p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g--~~~~~s~L~I~~v~~~d~G~Y~C~ 337 (600)
..+.+..|+.++|.|.+.|.|. +++.|+++++.+..... ...+. ....+ .....+.|.|.+++.+|+|.|+|.
T Consensus 113 ~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~--~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 189 (213)
T 2x1w_L 113 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKL--VNRDL-KTQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 189 (213)
T ss_dssp SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEE--EEEEE-CCCSSCSCEEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEE--ecccc-ccccCccceeeeEEEEECCCCcccCEEEEEE
Confidence 3447889999999999998654 57999998875432110 00000 00000 023346899999999999999999
Q ss_pred EecCCCceeEEEEEEEEEcc
Q psy1672 338 AENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 338 a~N~~G~~~~~v~L~V~~~~ 357 (600)
|.|..|..++.+.|.|..++
T Consensus 190 a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 190 ASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EECSSCEEEEEEEEEEEC--
T ss_pred EecCCCcEEEEEEEEEeccc
Confidence 99999999999999986543
No 244
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.60 E-value=1.7e-07 Score=87.09 Aligned_cols=84 Identities=32% Similarity=0.525 Sum_probs=68.3
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+.+..|+.++|.|.+.+.|.+.+.|+++++.+.... +..+..++ +.|.|.+++..|.|.|+|.+.|.
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~------~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 12 FNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE------KYILKGSN-----TELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp EEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSS------SEEEETTT-----TEEEECSCCGGGCEEEEEEEEET
T ss_pred cEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCc------cEEEeCCe-----eEEEEecCChhcCcEEEEEEEcc
Confidence 45778899999999999999999999999998776432 23232222 37999999999999999999999
Q ss_pred CCceeEEEEEEEEEc
Q psy1672 342 AGIADANFTLQVTYR 356 (600)
Q Consensus 342 ~G~~~~~v~L~V~~~ 356 (600)
.|.....+.|.|...
T Consensus 81 ~~~~~~~~~l~V~~~ 95 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQ 95 (192)
T ss_dssp TEEEEEEEEEEEEEE
T ss_pred ccccceEEEEEEEcc
Confidence 998888888887554
No 245
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=4.1e-07 Score=77.85 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=68.6
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcc----cCccceEEEeeCCceeeeeeEEEecCCCCC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTA----FSSYQRIFVIEQGEYERKSSLVLTNAQESD 330 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~----~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d 330 (600)
+.+........+.+|+.+.|.|.+.+ .+.+.|++||+.+..... +....++.+..+|. ...|+|.+++.+|
T Consensus 9 ~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~---~~~L~I~~v~~~D 83 (112)
T 2e6q_A 9 ARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGL---QHRLILHAVKHQD 83 (112)
T ss_dssp CCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTT---EEEEEEESCCSTT
T ss_pred cEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCc---EEEEEECCCCHHH
Confidence 34555567788999999999999997 778999999998865420 00011555555542 3479999999999
Q ss_pred CeEEEEEEecCCCceeEEEEEEEEEccC
Q psy1672 331 SGRFYCVAENRAGIADANFTLQVTYRGV 358 (600)
Q Consensus 331 ~G~Y~C~a~N~~G~~~~~v~L~V~~~~~ 358 (600)
+|.|+|...+ ....++.|.|...+.
T Consensus 84 ~G~Y~~~~~~---~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 84 SGALVGFSCP---GVQDSAALTIQESSG 108 (112)
T ss_dssp CSEEEEEEET---TEEEEEEEEEECSSC
T ss_pred CccEEEEEEC---CeeEEEEEEEeCCCc
Confidence 9999875544 345677888866543
No 246
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.60 E-value=1.5e-07 Score=94.55 Aligned_cols=94 Identities=21% Similarity=0.457 Sum_probs=74.1
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEe--eCCceeeeeeEEEecCCCCCC
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI--EQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~--~~g~~~~~s~L~I~~v~~~d~ 331 (600)
.|.+...+..+.+..|+.++|.|.+.|.|.+.+.|++++..+.... .+..+. .++ .+.|.|.+++..|.
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~-----~~~~~~~~~~~----~~~L~i~~v~~~d~ 74 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG-----LKYRIQEFKGG----YHQLIIASVTDDDA 74 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCS-----SSEEEEEETTT----EEEEEESSCCGGGC
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCC-----CeEEEEECCCC----EEEEEEccCChhhC
Confidence 3555556677889999999999999999999999999998775322 122222 222 34799999999999
Q ss_pred eEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 332 GRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
|.|+|.|.|..|.....+.|.|...
T Consensus 75 G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (305)
T 2nzi_A 75 TVYQVRATNQGGSVSGTASLEVEVP 99 (305)
T ss_dssp SEEEEEEEETTEEEEEEEEEEECEE
T ss_pred eEEEEEEEcCCCCccceEEEEEecC
Confidence 9999999999998888888888543
No 247
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.59 E-value=9.9e-08 Score=95.10 Aligned_cols=86 Identities=28% Similarity=0.498 Sum_probs=67.9
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
...+..|+.+.|.|.+.|.|.|.+.|++++..+...... ..+.....++ +.|.|.+++..|.|.|+|.|.|..
T Consensus 205 ~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~--~~~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~N~~ 277 (291)
T 1qz1_A 205 NATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEED--DEKHIFSDDS-----SELTIRNVDKNDEAEYVCIAENKA 277 (291)
T ss_dssp EEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--C--CSSEEECTTS-----CEEEECSCCGGGCEEEEEEEEETT
T ss_pred ccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCC--CcceEEcCCC-----cEEEEEecChhcCEEEEEEEEeCC
Confidence 456778999999999999999999999999887654311 1123222222 479999999999999999999999
Q ss_pred CceeEEEEEEEEE
Q psy1672 343 GIADANFTLQVTY 355 (600)
Q Consensus 343 G~~~~~v~L~V~~ 355 (600)
|..+..+.|.|..
T Consensus 278 G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 278 GEQDASIHLKVFA 290 (291)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CceEEEEEEEEEc
Confidence 9999999988853
No 248
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.58 E-value=5.6e-08 Score=91.77 Aligned_cols=85 Identities=12% Similarity=0.175 Sum_probs=66.1
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
....+..|..+.+.|.+.|.|+|.|.|++++..+.... ....++.....+.|.|.++...|.|.|+|.|+|.
T Consensus 126 ~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~--------~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~ 197 (218)
T 4frw_A 126 PALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR--------SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHP 197 (218)
T ss_dssp SCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE--------EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECT
T ss_pred eeeeeeeccccceeeeccCCcCceEEEEECCcccccCc--------eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeC
Confidence 44556778899999999999999999999887654321 1222333445678999999999999999999999
Q ss_pred CCceeEEEEEEEE
Q psy1672 342 AGIADANFTLQVT 354 (600)
Q Consensus 342 ~G~~~~~v~L~V~ 354 (600)
.|.....+.+.|.
T Consensus 198 ~g~~~~~~t~~v~ 210 (218)
T 4frw_A 198 GLLQDQRITHILH 210 (218)
T ss_dssp TCSSCEEEEEECC
T ss_pred CCCeEEEEEEEEE
Confidence 9988777766653
No 249
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.58 E-value=1.1e-07 Score=88.87 Aligned_cols=96 Identities=17% Similarity=0.238 Sum_probs=70.3
Q ss_pred cccccccccccccccccceeeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEE--eeCCc--eeeeeeEEEecCCCC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFV--IEQGE--YERKSSLVLTNAQES 329 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~--~~~g~--~~~~s~L~I~~v~~~ 329 (600)
|.+...+..+.+..|+.+.|.|.+. +.|.+.+.|+++++.+.... ..+..+ ..++. +...+.|.|.+++..
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~----~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 78 (195)
T 2c5d_C 3 SPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELAD----STQTQVPLGEDEQDDWIVVSQLRITSLQLS 78 (195)
T ss_dssp CSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCE----EEEEEEECSSSTTSEEEEEEEEEESSCCST
T ss_pred CeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCC----CCceEEEEccccccceeeccEEEEEecccc
Confidence 4455567778899999999999999 99999999999998876542 112222 22211 112468999999999
Q ss_pred CCeEEEEEEecCCCceeEE-EEEEEE
Q psy1672 330 DSGRFYCVAENRAGIADAN-FTLQVT 354 (600)
Q Consensus 330 d~G~Y~C~a~N~~G~~~~~-v~L~V~ 354 (600)
|.|.|+|.|.|..|..... +.|.|.
T Consensus 79 d~G~Y~C~~~~~~~~~~~~~~~l~V~ 104 (195)
T 2c5d_C 79 DTGQYQCLVFLGHQTFVSQPGYVGLE 104 (195)
T ss_dssp TCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CCcEEEEEEEeCCCceecccEEEEEe
Confidence 9999999999988764332 666663
No 250
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.58 E-value=1.1e-07 Score=90.43 Aligned_cols=92 Identities=21% Similarity=0.488 Sum_probs=68.8
Q ss_pred cccccccccccccccceeeeEe-ecCCCCeeEEEEcCeeccCCccc--CccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 257 IRMDSRYVEAVSSENATVVCRV-DSIPPAAISWYWNGRLLLNNTAF--SSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v-~g~P~p~i~W~~~g~~l~~~~~~--~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+...... ....+.....+ +.|.|.+++.+|.|.
T Consensus 111 ~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~------~~L~i~~~~~~d~G~ 184 (217)
T 2vr9_A 111 FRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDG------GNLLISNVEPIDEGN 184 (217)
T ss_dssp CSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETT------TEEEESSCCSTTCEE
T ss_pred cEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCC------CcEEEeeCCHHHCeE
Confidence 3334455667889999999999 79999999999999887643211 11223333333 379999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|+|.|.|..|.....+.+.+.
T Consensus 185 Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 185 YKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp EEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEcccceeccccEEEEE
Confidence 999999999998777666554
No 251
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.57 E-value=1.5e-07 Score=87.46 Aligned_cols=92 Identities=33% Similarity=0.480 Sum_probs=70.2
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.... .+..+..++ ..|.|.+++..|.|.|
T Consensus 8 P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~-----~~~~~~~~~-----~~L~i~~~~~~d~G~Y 77 (192)
T 2iep_A 8 PVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFD-----TRYSIRENG-----QLLTILSVEDSDDGIY 77 (192)
T ss_dssp EEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTC-----TTEEEEGGG-----TEEEESSCCGGGCEEE
T ss_pred ceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccC-----ccEEEcCCc-----cEEEEcCCCcccCeEE
Confidence 444555666778899999999999999999999999988765321 233343333 3699999999999999
Q ss_pred EEEEecCCCc-eeEEEEEEEEEc
Q psy1672 335 YCVAENRAGI-ADANFTLQVTYR 356 (600)
Q Consensus 335 ~C~a~N~~G~-~~~~v~L~V~~~ 356 (600)
+|.+.|..|. ....+.+.|...
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~~~ 100 (192)
T 2iep_A 78 CCTANNGVGGAVESCGALQVKMK 100 (192)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEE
T ss_pred EEEEEcCCCceeEeEEEEEEEeC
Confidence 9999999887 455566666543
No 252
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.56 E-value=1.8e-07 Score=86.38 Aligned_cols=94 Identities=17% Similarity=0.320 Sum_probs=68.9
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.... +..+..++ ....+.|.|.+++..|.|.|
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~------~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y 75 (182)
T 1rhf_A 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLD------QLYIPVSE-QHWIGFLSLKSVERSDAGRY 75 (182)
T ss_dssp ----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSE------EEEEEEET-TEEEEEEEESSCCGGGCEEE
T ss_pred CEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCC------ceEEEecC-CCceEEEEEeecCcccCeEE
Confidence 345555677888999999999999999999999999998776432 22222222 12246899999999999999
Q ss_pred EEEEecCCCc-eeEEEEEEEEE
Q psy1672 335 YCVAENRAGI-ADANFTLQVTY 355 (600)
Q Consensus 335 ~C~a~N~~G~-~~~~v~L~V~~ 355 (600)
+|.|.|..|. .+..+.|.|..
T Consensus 76 ~C~~~~~~~~~~~~~~~l~V~~ 97 (182)
T 1rhf_A 76 WCQVEDGGETEISQPVWLTVEG 97 (182)
T ss_dssp EEEESSCTTCEECCCEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEEEEEec
Confidence 9999999775 34567777753
No 253
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.56 E-value=2.9e-07 Score=85.45 Aligned_cols=86 Identities=29% Similarity=0.408 Sum_probs=64.4
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEc--CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWN--GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+..|+.+.|.|.+.+.|.+.+.|+++ +..+..... ....++.+.... ..+.|.|.+++.+|.|.|+|.|.|.
T Consensus 104 ~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~ 179 (192)
T 2va4_A 104 ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDK-SLDGRIEVKGQH---GSSSLHIKDVKLSDSGRYDCEAASR 179 (192)
T ss_dssp EEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCB-CTTSCEEEEEET---TEEEEEEESCCGGGCEEEEEEEECS
T ss_pred ceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeecccc-ccCCcEEEeecc---CceEEEEecCCcccCEEEEEEEEec
Confidence 3456699999999999999999999997 555443221 112233332221 1357999999999999999999999
Q ss_pred CCceeEEEEEEE
Q psy1672 342 AGIADANFTLQV 353 (600)
Q Consensus 342 ~G~~~~~v~L~V 353 (600)
.|..+..+.|.|
T Consensus 180 ~g~~~~~~~l~V 191 (192)
T 2va4_A 180 IGGHQKSMYLDI 191 (192)
T ss_dssp SCEEEEEEEEEE
T ss_pred CCceEEEEEEEe
Confidence 999988888876
No 254
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.56 E-value=3e-07 Score=95.83 Aligned_cols=93 Identities=28% Similarity=0.394 Sum_probs=71.5
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEc--CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWN--GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
+....+.+|+.+.|.|.+.|.|.+.|.|+++ |..+..... ....++.+.... ..+.|.|.+++.+|.|.|+|.|
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~-~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~a 82 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDK-SLDGRIEVKGQH---GSSSLHIKDVKLSDSGRYDCEA 82 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--C-CSSSSEEEEECS---SEEEEEEESCCGGGCEEEEEEE
T ss_pred cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcC-CCCCeEEEeccC---CcceEEEcccChhhCEEEEEEE
Confidence 3455667799999999999999999999998 877754321 112344443321 2458999999999999999999
Q ss_pred ecCCCceeEEEEEEEEEcc
Q psy1672 339 ENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 339 ~N~~G~~~~~v~L~V~~~~ 357 (600)
.|..|..+..+.|.|...+
T Consensus 83 ~n~~g~~~~~~~l~V~~~P 101 (389)
T 2jll_A 83 ASRIGGHQKSMYLDIEYAP 101 (389)
T ss_dssp ECSSCEEEEEEEEEEEEEE
T ss_pred EeCCCCcceEEEEEEEeCC
Confidence 9999999988999887654
No 255
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.55 E-value=1.1e-07 Score=99.10 Aligned_cols=74 Identities=20% Similarity=0.373 Sum_probs=64.4
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+....+..|+.+.|.|.+.|.|.+.|.|+++|..+.... +.|.|.+++..|.|.|+|.|.|
T Consensus 314 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~-------------------~~L~i~~v~~~d~G~Y~C~a~N 374 (388)
T 2v5m_A 314 PPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE-------------------SVLRIESVKKEDKGMYQCFVRN 374 (388)
T ss_dssp SSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCS-------------------SEEEESSCCGGGCEEEEEEEEC
T ss_pred CCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCC-------------------CEEEEecCChhhCEEEEEEEEc
Confidence 445667889999999999999999999999998765321 3799999999999999999999
Q ss_pred CCCceeEEEEEEE
Q psy1672 341 RAGIADANFTLQV 353 (600)
Q Consensus 341 ~~G~~~~~v~L~V 353 (600)
..|.....+.|.|
T Consensus 375 ~~G~~~~~~~l~V 387 (388)
T 2v5m_A 375 DRESAEASAELKL 387 (388)
T ss_dssp SSCEEEEEEEEEE
T ss_pred CCCcEEEEEEEEe
Confidence 9999999888876
No 256
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.55 E-value=1.5e-07 Score=84.23 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=66.7
Q ss_pred cccccccccccccceeeeEeecCCCCeeEEEEcCee-ccCC-cccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRL-LLNN-TAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~-l~~~-~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
..+..+.+..|+.++|.|.+.+.|.+.+.|++.+.. +... .......++.+.... .....|.|.+++.+|+|.|+|
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~--~~~~~L~I~~v~~~DsG~Y~C 120 (145)
T 1z9m_A 43 PWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTST--PHELSISISNVALADEGEYTC 120 (145)
T ss_dssp CBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEEC--SSEEEEEECSCCGGGCEEEEE
T ss_pred cCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCC--CCeEEEEECCCChhhCEEEEE
Confidence 345678889999999999999998899999953221 1000 000011223222211 124589999999999999999
Q ss_pred EEecCCCceeEEEEEEEEEcc
Q psy1672 337 VAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 337 ~a~N~~G~~~~~v~L~V~~~~ 357 (600)
.|.|. |.....+.|.|...+
T Consensus 121 ~~~n~-~~~~~~~~L~V~~~P 140 (145)
T 1z9m_A 121 SIFTM-PVRTAKSLVTVLGIP 140 (145)
T ss_dssp EECSS-SCEEEEEEEEEECCC
T ss_pred EEEcC-CCceEEEEEEEEeCC
Confidence 99999 988888888886543
No 257
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.54 E-value=1e-07 Score=90.07 Aligned_cols=86 Identities=29% Similarity=0.463 Sum_probs=66.1
Q ss_pred ccccccccccccceeeeEe-ecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 260 DSRYVEAVSSENATVVCRV-DSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
.+....+..|+.+.|.|.+ .+.|.+.+.|++++..+.... .+.. ..+ +.|.|.+++.+|.|.|+|.|
T Consensus 117 ~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~-----~~~~-~~~------~~L~i~~~~~~d~G~Y~C~a 184 (212)
T 2v9r_A 117 NPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD-----ERIT-IRG------GKLMITYTRKSDAGKYVCVG 184 (212)
T ss_dssp CCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS-----TTEE-EET------TEEEESSCCGGGCEEEEEEE
T ss_pred CCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc-----ceEE-ccC------CeEEEeeCCHhhCeeEEEEE
Confidence 3455677889999999999 799999999999998876432 1121 122 37999999999999999999
Q ss_pred ecCCCceeE-EEEEEEEEcc
Q psy1672 339 ENRAGIADA-NFTLQVTYRG 357 (600)
Q Consensus 339 ~N~~G~~~~-~v~L~V~~~~ 357 (600)
.|..|.... .+.|.|...+
T Consensus 185 ~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 185 TNMVGERESEVAELTVLERP 204 (212)
T ss_dssp EETTEEEECCCEEEEEEC--
T ss_pred ecccCceecceEEEEEEeCc
Confidence 999998654 3788886543
No 258
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.54 E-value=3e-07 Score=88.94 Aligned_cols=97 Identities=25% Similarity=0.289 Sum_probs=68.3
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEE----cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYW----NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~----~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+........ ..............+.|.|.+++..|.|.|+|
T Consensus 121 ~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 199 (241)
T 3grw_A 121 PANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYV-TVLKSWISESVEADVRLRLANVSERDGGEYLC 199 (241)
T ss_dssp TCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCE-EEEEEEECSBSEEEEEEEECSCCGGGCEEEEE
T ss_pred CccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceee-eeeeEeeeeecCCceEEEECcCCcccCcEEEE
Confidence 345567789999999999999999999999 7766543321100 00111111222345689999999999999999
Q ss_pred EEecCCCceeEEEEEEEEEccC
Q psy1672 337 VAENRAGIADANFTLQVTYRGV 358 (600)
Q Consensus 337 ~a~N~~G~~~~~v~L~V~~~~~ 358 (600)
.|.|..|..+..+.|.|...+.
T Consensus 200 ~a~N~~g~~~~~~~l~V~~~p~ 221 (241)
T 3grw_A 200 RATNFIGVAEKAFWLSVHGPRA 221 (241)
T ss_dssp EEECSSCEEEEEEEEEC-----
T ss_pred EEecCcceEEEEEEEEecCCCC
Confidence 9999999999999998866543
No 259
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.53 E-value=2.5e-07 Score=86.15 Aligned_cols=80 Identities=21% Similarity=0.226 Sum_probs=63.5
Q ss_pred ccccccc-cccceeeeEeecCCC--CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 262 RYVEAVS-SENATVVCRVDSIPP--AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 262 ~~~~v~~-G~~v~L~C~v~g~P~--p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
....+.. |+.+.|.|.+.+.|. +.+.|++++..+...... ...+.|.|.+++..|.|.|+|.|
T Consensus 10 ~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~--------------~~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 10 EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKN--------------ASNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBC--------------CSEEEEEESSCCGGGCEEEEEEE
T ss_pred ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceE--------------eccEEEEEecCCcccCEEEEEEE
Confidence 3344445 999999999998887 899999999877643311 12358999999999999999999
Q ss_pred ecCCCceeEEEEEEEEEc
Q psy1672 339 ENRAGIADANFTLQVTYR 356 (600)
Q Consensus 339 ~N~~G~~~~~v~L~V~~~ 356 (600)
.|. |.....+.|.|...
T Consensus 76 ~n~-~~~~~~~~l~V~~~ 92 (190)
T 2wv3_A 76 HFV-SAPKANATIEVKAA 92 (190)
T ss_dssp EET-TEEEEEEEEEEECC
T ss_pred EeC-CcccccEEEEEecC
Confidence 999 88888888888643
No 260
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.52 E-value=2e-07 Score=87.21 Aligned_cols=84 Identities=17% Similarity=0.304 Sum_probs=66.5
Q ss_pred ccccccccccccccccccceeeeEeecCCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...+....+..|+.+.|.|.+.|.|.| .+.|++++..+...... ...+.|.|.+++ |+|
T Consensus 106 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~--------------~~~~~L~i~~~~--d~G 169 (195)
T 2c5d_C 106 LPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH--------------GPQRSLHVPGLN--KTS 169 (195)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS--------------SCCEEEEECCCS--SCE
T ss_pred CCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc--------------CCCCeEEEcccc--cCc
Confidence 4555555556778889999999999999999 99999999877654311 123478899887 789
Q ss_pred EEEEEEecCCCcee-EEEEEEE
Q psy1672 333 RFYCVAENRAGIAD-ANFTLQV 353 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~-~~v~L~V 353 (600)
.|+|.|.|..|... +.+.|.|
T Consensus 170 ~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 170 SFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEEEcCCCceEEEEEEEEE
Confidence 99999999999885 6788877
No 261
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.52 E-value=2.4e-07 Score=102.44 Aligned_cols=91 Identities=22% Similarity=0.360 Sum_probs=73.6
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+........+..|+.+.+.|.+.|.|.|++.|+++++.+.... ++.+..++. ...|.|.++...|+|.|
T Consensus 483 P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~------~~~i~~~~~---~~~L~I~~~~~~D~G~Y 553 (573)
T 3uto_A 483 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSV------KYMKRYNGN---DYGLTINRVKGDDKGEY 553 (573)
T ss_dssp CEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSS------SEEEEEETT---EEEEEECSCCGGGCEEE
T ss_pred CccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCC------cEEEEEcCC---EEEEEEcCCCcccCcEE
Confidence 333334456678899999999999999999999999999887544 344433332 24799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~ 354 (600)
+|+|.|..|.+++.+.|.|+
T Consensus 554 t~~A~N~~G~~~~~v~l~Vt 573 (573)
T 3uto_A 554 TVRAKNSYGTKEEIVFLNVT 573 (573)
T ss_dssp EEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEeCCCcEEEEEEEEEC
Confidence 99999999999999999873
No 262
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.51 E-value=1.6e-07 Score=89.93 Aligned_cols=82 Identities=13% Similarity=0.270 Sum_probs=66.2
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++..|.|.|
T Consensus 119 p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~------------------~~~L~i~~v~~~d~G~Y 180 (218)
T 3k0w_A 119 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------------------KKLYMVPYVDLEHQGTY 180 (218)
T ss_dssp CEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC------------------SSEEEESSCCGGGCEEE
T ss_pred ceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC------------------CCEEEEeecChhcCEEE
Confidence 344444556778899999999999999999999999988775432 13689999999999999
Q ss_pred EEEEecCCCc-eeEEEEEEEE
Q psy1672 335 YCVAENRAGI-ADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~-~~~~v~L~V~ 354 (600)
+|.|.|..|. .+..+.|.|.
T Consensus 181 ~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 181 WCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp EEEEECSSCEEECCCEEEEEC
T ss_pred EEEEEcCCCCceeeeEEEEEe
Confidence 9999999887 4566677664
No 263
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.51 E-value=2.5e-07 Score=102.26 Aligned_cols=91 Identities=20% Similarity=0.380 Sum_probs=71.3
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
.+...+..+.+..|+.+.|.|.+.|.|.|.+.|+++++.+.... +..+..++. .+.|.|.+++.+|.|.|+
T Consensus 386 ~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~------~~~~~~~~~---~~~L~i~~v~~~D~G~Y~ 456 (570)
T 3b43_A 386 VFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGK------KYKIMSENF---LTSIHILNVDSADIGEYQ 456 (570)
T ss_dssp EECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSS------SEEEEEETT---EEEEEECSCCGGGCEEEE
T ss_pred eeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCC------CEEEEEcCC---EEEEEECCCChhhCEEEE
Confidence 33334455667789999999999999999999999998876433 333333321 247999999999999999
Q ss_pred EEEecCCCceeEEEEEEEEE
Q psy1672 336 CVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 336 C~a~N~~G~~~~~v~L~V~~ 355 (600)
|.|.|..|.....+.|.|..
T Consensus 457 C~A~N~~G~~~~~~~l~v~~ 476 (570)
T 3b43_A 457 CKASNDVGSDTCVGSITLKA 476 (570)
T ss_dssp EEEECSSCEEEEEEEEEECC
T ss_pred EEEEECCCeEEEEEEEEecc
Confidence 99999999998888887743
No 264
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.51 E-value=3.2e-07 Score=87.78 Aligned_cols=95 Identities=23% Similarity=0.310 Sum_probs=69.3
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEE----cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYW----NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~----~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
+....+..|+.+.|.|.+.+.|.+.+.|++ +|..+...... ...............+.|.|.+++..|.|.|+|
T Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 202 (231)
T 3ojm_B 125 PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLP--YLKVLKHSGINSSNAEVLALFNVTEADAGEYIC 202 (231)
T ss_dssp SCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCB--CEEEEEECSTTCSCTTEEEECSCCGGGCEEEEE
T ss_pred CCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcc--eEeEecccccccCCccEEEEecCCHHHCeEEEE
Confidence 345667889999999999999999999999 66655433210 111111111111223579999999999999999
Q ss_pred EEecCCCceeEEEEEEEEEcc
Q psy1672 337 VAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 337 ~a~N~~G~~~~~v~L~V~~~~ 357 (600)
.|.|..|..+..+.|.|...+
T Consensus 203 ~a~n~~g~~~~~~~l~V~~~p 223 (231)
T 3ojm_B 203 KVSNYIGQANQSAWLTVLPKQ 223 (231)
T ss_dssp EEEETTEEEEEEEEEEEECCC
T ss_pred EEEeccceEeeEEEEEEecCC
Confidence 999999999999999987654
No 265
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.50 E-value=9.9e-08 Score=90.97 Aligned_cols=91 Identities=20% Similarity=0.119 Sum_probs=64.3
Q ss_pred cccccccccceeeeE---eecCCCCeeEEEEcCeeccCCccc-----------CccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 263 YVEAVSSENATVVCR---VDSIPPAAISWYWNGRLLLNNTAF-----------SSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~---v~g~P~p~i~W~~~g~~l~~~~~~-----------~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
.+++..|+.++|.|. +.+.|.+.|.|+++|......... ....+..+...+ ....|.|.+++.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~L~I~~v~~ 78 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSA---NTFFLVVTAANI 78 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEET---TEEEEEESSCCG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcC---CEEEEEEccCCH
Confidence 467889999999994 567899999999976432211000 001111121111 235799999999
Q ss_pred CCCeEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 329 SDSGRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
+|+|.|+|.|.|..|..+..+.|.|...
T Consensus 79 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~p 106 (203)
T 4fa8_A 79 SHDGNYLCRMKLGETEVTKQEHLSVVKP 106 (203)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred HHCeEEEEEEEcCCCcEEEEEEEEecCC
Confidence 9999999999999999998888888643
No 266
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.50 E-value=2.6e-07 Score=96.35 Aligned_cols=76 Identities=26% Similarity=0.476 Sum_probs=64.7
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
..+..|+.+.|.|.+.|.|.|.+.|+++|..+... ++.+ .+ +.|.|.+++..|.|.|+|.|.|..|
T Consensus 319 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-------~~~~-~~------~~L~i~~~~~~d~G~Y~C~a~N~~G 384 (395)
T 1bih_A 319 IVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-------RATV-TD------SGLVIKGVKNGDKGYYGCRATNEHG 384 (395)
T ss_dssp EEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-------SEEE-ET------TEEEESSCCSTTCEEEEEEEEETTE
T ss_pred eEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-------ceEE-EC------CEEEEeeCCcccCEEEEEEEEccCC
Confidence 56788999999999999999999999999877542 2222 22 2799999999999999999999999
Q ss_pred ceeEEEEEEE
Q psy1672 344 IADANFTLQV 353 (600)
Q Consensus 344 ~~~~~v~L~V 353 (600)
.....+.|.|
T Consensus 385 ~~~~~~~l~V 394 (395)
T 1bih_A 385 DKYFETLVQV 394 (395)
T ss_dssp EEEEEEEEEE
T ss_pred CceEEEEEEE
Confidence 9998888876
No 267
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.50 E-value=4.1e-08 Score=99.08 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=63.4
Q ss_pred ccccccccceeeeEeecCCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
..+..|+.++|.|.+.|.|+| .+.|++++..+..... ..++ ..+.|.+++.+|+|.|+|+|.|.+
T Consensus 222 ~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~---------~~~~-----~~l~i~~v~~~d~G~Y~C~A~N~~ 287 (308)
T 4fom_A 222 NWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL---------ASDN-----TLHFVHPLTFNYSGVYICKVTNSL 287 (308)
T ss_dssp CEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB---------CSTT-----EEECCSCCCSCCCSEEEEEEEETT
T ss_pred eeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE---------EcCC-----eEEEECCCChhhCEEEEEEEEeCC
Confidence 445678899999999999988 6999998876643321 1111 246688999999999999999999
Q ss_pred CceeEEEEEEEEEcc
Q psy1672 343 GIADANFTLQVTYRG 357 (600)
Q Consensus 343 G~~~~~v~L~V~~~~ 357 (600)
|.++..+.|.|.+.|
T Consensus 288 G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 288 GQRSDQKVIYISDPP 302 (308)
T ss_dssp EEEEEEEECCEECCC
T ss_pred CcEEEEEEEEEEcCC
Confidence 999999999887654
No 268
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.49 E-value=3.8e-07 Score=95.41 Aligned_cols=138 Identities=24% Similarity=0.312 Sum_probs=99.0
Q ss_pred CCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcc
Q psy1672 62 QILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKG 141 (600)
Q Consensus 62 ~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~ 141 (600)
..+....|. ...+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++.+....|.++.+|+.+.+..+ +..+...
T Consensus 206 ~~i~~~~f~--~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~ 280 (379)
T 4h09_A 206 KTVTAYGFS--YGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYL 280 (379)
T ss_dssp CEECTTTTT--TCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTT
T ss_pred eEEeecccc--cccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccc
Confidence 334444454 5677777777543 66677777777778888877654 77777777777777888777543 6677777
Q ss_pred cccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCC
Q psy1672 142 AFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205 (600)
Q Consensus 142 ~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N 205 (600)
+|.++.+|+.+.+.++.++.|...+|.++.+|+.+.|..+ ++.|....|..+.+|+.+.+..+
T Consensus 281 aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 281 LCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 7778888888888777777777778888888888887654 77777777777777777766443
No 269
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.48 E-value=1.8e-07 Score=86.77 Aligned_cols=75 Identities=9% Similarity=0.089 Sum_probs=62.3
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
...+..|+.++|.|.+.+.|.+.+.|++++..+. ...+.|.|.+++.+|.|.|+|.|.|..
T Consensus 106 ~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~-------------------~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 166 (184)
T 2ny1_B 106 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------------------QGGKTLSVSQLELQDSGTWTCTVLQNQ 166 (184)
T ss_dssp CSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE-------------------EESSEEEESSCCGGGCEEEEEEEEETT
T ss_pred CceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc-------------------cCceEEEEecCCcCCCeEEEEEEEECC
Confidence 3467889999999999999999999998764331 112479999999999999999999999
Q ss_pred CceeEEEEEEEEEc
Q psy1672 343 GIADANFTLQVTYR 356 (600)
Q Consensus 343 G~~~~~v~L~V~~~ 356 (600)
|..+..+.|.|...
T Consensus 167 ~~~~~~~~l~V~~~ 180 (184)
T 2ny1_B 167 KKVEFKIDIVVLAF 180 (184)
T ss_dssp EEEEEEEEEEEECC
T ss_pred ceEEEEEEEEEEec
Confidence 99988888888543
No 270
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.48 E-value=2.8e-07 Score=98.10 Aligned_cols=97 Identities=20% Similarity=0.282 Sum_probs=63.9
Q ss_pred ccccCcc-----cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEE
Q psy1672 248 ADDFACK-----PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLV 322 (600)
Q Consensus 248 ~~~~~C~-----p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~ 322 (600)
.++|.|. +.+...+..+++.+|+.+.|.|.+.+.|.+.|.|++++..+.....+.. +. .....|.
T Consensus 37 ~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~--------~~--~~~~sL~ 106 (423)
T 3qs7_E 37 PEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL--------QN--RGVVSMV 106 (423)
T ss_dssp -------------------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC---------------CEEEEE
T ss_pred HHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceecc--------cc--ceEEEEE
Confidence 3556773 2333445578899999999999999999999999998876553221100 00 1123689
Q ss_pred EecCCCCCCeEEEEEEecCCCceeEEEEEEEE
Q psy1672 323 LTNAQESDSGRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 323 I~~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|.+++.+|.|.|+|.|.|..|.....+.|.|.
T Consensus 107 I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 138 (423)
T 3qs7_E 107 ILKMTETQAGEYLLFIQSEATNYTILFTVSIR 138 (423)
T ss_dssp ESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC
T ss_pred EeecCcccCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 99999999999999999999998888888875
No 271
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.48 E-value=3.2e-07 Score=92.30 Aligned_cols=95 Identities=19% Similarity=0.326 Sum_probs=68.3
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCC-CCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQE-SDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~-~d~G 332 (600)
.|.+...+....+..|+.++|.|.+.|.|.+.|.|+++|..+.... .......++ ..+.|.|.+++. .|.|
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~-----~~~~~~~~~---~~~~L~i~~~~~~~D~G 77 (304)
T 2yd9_A 6 PPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQR-----FETIEFDES---AGAVLRIQPLRTPRDEN 77 (304)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTT-----EEEEEETTT---TEEEEEECSCCTTTTCS
T ss_pred CCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCc-----eEEEEecCC---CceEEEEecccccCCCe
Confidence 4566666777888999999999999999999999999988764321 111112222 125799999997 9999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEc
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
.|+|.|.|..|..+..+.|.|...
T Consensus 78 ~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (304)
T 2yd9_A 78 VYECVAQNSVGEITVHAKLTVLRE 101 (304)
T ss_dssp EEEEEEECSSCEECCEEEEEEECG
T ss_pred EEEEEEECCCCeEEEEEEEEEecc
Confidence 999999999999888888888654
No 272
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.48 E-value=8.1e-07 Score=78.72 Aligned_cols=95 Identities=20% Similarity=0.330 Sum_probs=65.0
Q ss_pred ccccccccccccceeeeEeecCCC---CeeEEEEcCe--ecc---CCc-----cc-CccceEEEeeCCceeeeeeEEEec
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPP---AAISWYWNGR--LLL---NNT-----AF-SSYQRIFVIEQGEYERKSSLVLTN 325 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~---p~i~W~~~g~--~l~---~~~-----~~-~~~~~~~~~~~g~~~~~s~L~I~~ 325 (600)
.+..+.+..|++++|.|.+.+.+. +.+.|++++. .+. ... .. ....|+.+..++.......|.|.+
T Consensus 12 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 91 (139)
T 1pko_A 12 PGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQN 91 (139)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEcc
Confidence 345678889999999999986543 6899999653 110 000 00 012344444332112245899999
Q ss_pred CCCCCCeEEEEEEecCCCceeEEEEEEEE
Q psy1672 326 AQESDSGRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 326 v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 92 v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 92 VRFSDEGGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCHHHCEEEEEEEEcCCCceEEEEEEEEe
Confidence 99999999999999999888888888886
No 273
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.47 E-value=2.9e-07 Score=86.64 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=65.3
Q ss_pred ccccccccccccceeeeEeecCCC-----CeeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPP-----AAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~-----p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.+..+.+..|+.+.|.|.+.+.|. +.+.|++ ++..... ..+..+..+........|.|.+++.+|.|.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~------~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 81 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQ------SERATLLEEQLPLGKALFHIPSVQVRDSGQ 81 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCB------CSSCEECGGGGGGTEEEEEECSCCGGGCEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCccccc------CCceEEeeccccCCeeEEEECCCCHHHCcE
Confidence 345677889999999999998886 8999999 4432221 123333332111123589999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
|+|.|.|..|.....+.|.|...
T Consensus 82 Y~C~~~~~~~~~~~~~~l~V~~~ 104 (202)
T 3bp6_B 82 YRCLVICGAAWDYKYLTVKVKAS 104 (202)
T ss_dssp EEEEEEETTEEEEEEEEEEEEBC
T ss_pred EEEEEEeCCCcceEEEEEEecCC
Confidence 99999999998888888888643
No 274
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.47 E-value=2e-07 Score=88.00 Aligned_cols=100 Identities=23% Similarity=0.367 Sum_probs=70.7
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+......... ......++. .....+.|.+++..|.|.
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRS-HRMLLPSGS-LFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTC-SEEECTTSC-EEESSCCCCSSCCCSCEE
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeecccccccc-ceEEecCCc-EEEEEEEecCCCcccCeE
Confidence 455666667788899999999999999999999999999877644321111 122222331 222346677889999999
Q ss_pred EEEEEecCCCce-eEEEEEEEEE
Q psy1672 334 FYCVAENRAGIA-DANFTLQVTY 355 (600)
Q Consensus 334 Y~C~a~N~~G~~-~~~v~L~V~~ 355 (600)
|+|.|.|..|.. ...+.+.|..
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~ 109 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAI 109 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECE
T ss_pred EEEEEECCCCceeecceEEEEEe
Confidence 999999998865 4456666644
No 275
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.47 E-value=2.8e-07 Score=88.14 Aligned_cols=87 Identities=23% Similarity=0.415 Sum_probs=68.2
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
....+..|+.+.|.|.+.+.|.+.+.|+++++.+.....+. ...... ..+.|.|.+++..|.|.|+|.|.|.
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~---~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~n~ 98 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG---GYKVRN-----QHWSLIMESVVPSDKGNYTCVVENE 98 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTT---CCEEEG-----GGTEEEECSCCGGGCEEEEEEEEET
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCcccccccccc---ceeeec-----CcceEEEecCCcccCEEEEEEEecc
Confidence 55678899999999999999999999999998876443211 111111 1247999999999999999999999
Q ss_pred CCceeEEEEEEEEEc
Q psy1672 342 AGIADANFTLQVTYR 356 (600)
Q Consensus 342 ~G~~~~~v~L~V~~~ 356 (600)
.|.....+.+.|...
T Consensus 99 ~~~~~~~~~l~V~~~ 113 (231)
T 3ojm_B 99 YGSINHTYHLDVVER 113 (231)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred cCcccccEEEEEEcC
Confidence 998888888888643
No 276
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.46 E-value=4.4e-07 Score=83.93 Aligned_cols=90 Identities=26% Similarity=0.374 Sum_probs=62.7
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ..+.....+ +.|.|.+++..|.|.|
T Consensus 3 ~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~----~~~~~~~~~------~~L~i~~~~~~d~G~Y 72 (189)
T 2v5t_A 3 LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTIS----DNRFAMLAN------NNLQILNINKSDEGIY 72 (189)
T ss_dssp CEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCC----CTTEEECTT------SCEEETTCCGGGCEEE
T ss_pred ceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceecc----CCeEEEecC------CCEEEeeCCHhHCcEE
Confidence 344455666788899999999999999999999999887654322 223333333 3799999999999999
Q ss_pred EEEEecCCCcee--EEEEEEEE
Q psy1672 335 YCVAENRAGIAD--ANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~--~~v~L~V~ 354 (600)
+|.+.|..+... ..+.+.+.
T Consensus 73 ~C~~~~~~~~~~~~~~~~l~v~ 94 (189)
T 2v5t_A 73 RCEGRVEARGEIDFRDIIVIVN 94 (189)
T ss_dssp EEEEEETTTTEEEEEEEEEEEE
T ss_pred EEEEEEcCCCceEEEEEEEEec
Confidence 999999986543 34444443
No 277
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.45 E-value=4e-07 Score=83.95 Aligned_cols=82 Identities=20% Similarity=0.333 Sum_probs=63.9
Q ss_pred ccccccccccccccccccceeeeEeecCCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...+....+..|+.+.|.|.+.|.|.| .+.|++++..+..... ..+.|.|.++ .|+|
T Consensus 98 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~----------------~~~~L~i~~~--~d~G 159 (182)
T 1rhf_A 98 VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP----------------SPSVLNVTGV--TQST 159 (182)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE----------------SSEEEEECCC--SSCE
T ss_pred CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC----------------CceEEEEecc--ccCe
Confidence 4555555566778899999999999999999 9999999887753320 1247888888 5889
Q ss_pred EEEEEEecCCCcee-EEEEEEE
Q psy1672 333 RFYCVAENRAGIAD-ANFTLQV 353 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~-~~v~L~V 353 (600)
.|+|.|.|..|... ..+.|.|
T Consensus 160 ~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 160 MFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEECCCCCcccceEEEEe
Confidence 99999999999874 3666665
No 278
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.45 E-value=6.3e-07 Score=83.20 Aligned_cols=88 Identities=27% Similarity=0.494 Sum_probs=67.3
Q ss_pred ccccccccccccccceeeeEeecCCCCeeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 258 RMDSRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 258 ~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
...+..+.+..|+.+.|.|.+.+.|. .+.|++ ++..+... .+..+..++ ..+.|.|.+++..|.|.|+|
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~------~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C 75 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST------QRVVVQKEG---VRSRLTIYNANIEDAGIYRC 75 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCC------SSEEEEEET---TEEEEEECSCCGGGCEEEEE
T ss_pred EecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCC------ceEEEECCC---CeEEEEEccCCcccCeEEEE
Confidence 34456778889999999999998877 899999 67665432 234333333 13489999999999999999
Q ss_pred EEecCCCce-eEEEEEEEEE
Q psy1672 337 VAENRAGIA-DANFTLQVTY 355 (600)
Q Consensus 337 ~a~N~~G~~-~~~v~L~V~~ 355 (600)
.|.|..|.. +..+.|.|..
T Consensus 76 ~~~~~~g~~~~~~~~l~v~~ 95 (189)
T 2v44_A 76 QATDAKGQTQEATVVLEIYQ 95 (189)
T ss_dssp EEECTTSCEEEEEEEEEEEC
T ss_pred EEEeCCCCcEEEEEEEEEec
Confidence 999999876 5667777754
No 279
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.45 E-value=5e-07 Score=83.95 Aligned_cols=92 Identities=27% Similarity=0.446 Sum_probs=67.8
Q ss_pred ccccccccccccccccceeeeEeecCC-CCeeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIP-PAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P-~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.+...+....+..|+.++|.|.+.+.+ .+.+.|++ +++.+.... .++.+.... ...+.|.|.+++..|.|.
T Consensus 4 ~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~-----~~~~~~~~~--~~~~~L~i~~~~~~d~G~ 76 (191)
T 1epf_A 4 QVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQ-----QRISVVWND--DDSSTLTIYNANIDDAGI 76 (191)
T ss_dssp CEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBS-----SSEEEEEEE--TTEEEEEECSCCGGGCEE
T ss_pred EEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCC-----CeEEEEECC--CCceEEEEccCCcccCEE
Confidence 344456677788999999999999876 78999999 887765321 233332211 123589999999999999
Q ss_pred EEEEEecCCC-ceeEEEEEEEE
Q psy1672 334 FYCVAENRAG-IADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G-~~~~~v~L~V~ 354 (600)
|+|.|.|..| ..+..+.|.|.
T Consensus 77 Y~C~~~~~~~~~~~~~~~l~v~ 98 (191)
T 1epf_A 77 YKCVVTAEDGTQSEATVNVKIF 98 (191)
T ss_dssp EEEEEEETTTEEEEEEEEEEEE
T ss_pred EEEEEEcCCCcceEEEEEEEee
Confidence 9999999984 55666667664
No 280
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.43 E-value=4.4e-07 Score=85.57 Aligned_cols=88 Identities=23% Similarity=0.422 Sum_probs=61.8
Q ss_pred cccccccccccceeeeE-eecCCCCeeEEEEcCe-eccCCcccCc---cceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 261 SRYVEAVSSENATVVCR-VDSIPPAAISWYWNGR-LLLNNTAFSS---YQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~-v~g~P~p~i~W~~~g~-~l~~~~~~~~---~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
.....+..|+.+.|.|. +.+.|.+.+.|++++. .+........ ..+..... ..+.|.|.+++..|.|.|+
T Consensus 111 ~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~ 185 (212)
T 1f97_A 111 SVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDP-----KSGDLIFDPVTAFDSGEYY 185 (212)
T ss_dssp ECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECT-----TTCCEEESSCCGGGCEEEE
T ss_pred CCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecC-----CCceEEEEecChhhCcEEE
Confidence 33456778999999999 7899999999999998 7654321100 01111111 1347999999999999999
Q ss_pred EEEecCCCceeE--EEEEEE
Q psy1672 336 CVAENRAGIADA--NFTLQV 353 (600)
Q Consensus 336 C~a~N~~G~~~~--~v~L~V 353 (600)
|.|.|..|.... .+.|.|
T Consensus 186 C~a~n~~g~~~~s~~~~l~V 205 (212)
T 1f97_A 186 CQAQNGYGTAMRSEAAHMDA 205 (212)
T ss_dssp EEEECSSSCCEECCCEEEEE
T ss_pred EEEccccCCccccceEEEEE
Confidence 999999999844 455554
No 281
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.43 E-value=9.7e-07 Score=84.75 Aligned_cols=94 Identities=21% Similarity=0.307 Sum_probs=63.3
Q ss_pred cccccccccccceeeeEeecCCCC---eeEEEEcCee-----------ccCCcccCccceEEEeeCCceeeeeeEEEecC
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPA---AISWYWNGRL-----------LLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA 326 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p---~i~W~~~g~~-----------l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v 326 (600)
...+.+..|+.++|.|.+.+.+.+ .|.|++++.. +..........+......+.......|.|.++
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 345778899999999999876654 6999986532 11111111122333333322223468999999
Q ss_pred CCCCCeEEEEEEecCCCceeEEEEEEEE
Q psy1672 327 QESDSGRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 327 ~~~d~G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
+..|.|.|+|.|.|..|..+..+.+.+.
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~ 118 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVA 118 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeec
Confidence 9999999999999999887776666554
No 282
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.42 E-value=5.9e-08 Score=99.75 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=41.7
Q ss_pred cccccccceeeeEee----cCCCCeeEEEEcCeeccCC-cccCccceEEEeeCCceeeeeeEEEecCCCCCC-eEEEEEE
Q psy1672 265 EAVSSENATVVCRVD----SIPPAAISWYWNGRLLLNN-TAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS-GRFYCVA 338 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~----g~P~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~-G~Y~C~a 338 (600)
.+..|+.+.|.|.+. |.|.+.+.|+++++.+... ..+....+......+.....+.|.|.+++.+|. |.|+|.|
T Consensus 237 ~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a 316 (349)
T 4dep_C 237 EKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHA 316 (349)
T ss_dssp --------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEE
T ss_pred EEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEE
Confidence 778899999999999 5789999999999877641 111111111111112223356799999999999 9999999
Q ss_pred ecCCCceeEEEEEEEEE
Q psy1672 339 ENRAGIADANFTLQVTY 355 (600)
Q Consensus 339 ~N~~G~~~~~v~L~V~~ 355 (600)
.|..|.....+.|.|..
T Consensus 317 ~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 317 RSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp ECSSCEEEEECC-----
T ss_pred EcCCCcEEEEEEEeeec
Confidence 99999999998888853
No 283
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.42 E-value=4.1e-07 Score=91.55 Aligned_cols=88 Identities=22% Similarity=0.355 Sum_probs=64.0
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+....... .+ ...|.|.++ .|+|.|
T Consensus 206 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~---------~~----~~~L~i~~~--~d~G~Y 270 (304)
T 2yd9_A 206 PRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP---------VG----RNVLELTDV--KDSANY 270 (304)
T ss_dssp EEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC---------BS----EEEEEECSC--CSCEEE
T ss_pred CcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc---------CC----cEEEEEccc--ccCEEE
Confidence 444444555678899999999999999999999999998876543110 11 224666655 589999
Q ss_pred EEEEecCCCceeEEEEEEEEEcc
Q psy1672 335 YCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
+|.|.|..|.....+.|.|...+
T Consensus 271 ~C~a~N~~G~~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 271 TCVAMSSLGVIEAVAQITVKSLP 293 (304)
T ss_dssp EEEEEETTEEEEEEEEEC-----
T ss_pred EEEEEeCCCcEEEEEEEEEecCc
Confidence 99999999999999988886543
No 284
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.42 E-value=5.5e-07 Score=99.53 Aligned_cols=91 Identities=18% Similarity=0.424 Sum_probs=69.5
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+........+..|+.+.|.|.+.|.|++.+.|++++..+.... .++.+...+ ..+.|.|.+++..|+|.|
T Consensus 478 P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~-----~~~~~~~~~---~~~~L~i~~~~~~d~G~Y 549 (570)
T 3b43_A 478 PRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRES-----DNIWISYSE---NIATLQFSRAEPANAGKY 549 (570)
T ss_dssp CEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCT-----TTEEECCCS---SEEEEEESSCCTTCCEEE
T ss_pred CcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCC-----CeEEEEECC---CEEEEEECcCCHHHCEEE
Confidence 333334455667889999999999999999999999875443221 123332222 235899999999999999
Q ss_pred EEEEecCCCceeEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V 353 (600)
+|.|.|.+|.++..+.|.|
T Consensus 550 ~C~a~N~~G~~~~~a~L~V 568 (570)
T 3b43_A 550 TCQIKNEAGTQECFATLSV 568 (570)
T ss_dssp EEEEECSSCEEEEEEEECC
T ss_pred EEEEEECCcEEEEEEEEEE
Confidence 9999999999999988876
No 285
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.42 E-value=4.5e-07 Score=86.21 Aligned_cols=97 Identities=27% Similarity=0.488 Sum_probs=69.5
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+.+|+.+.|.|.+.+.|.+.|.|++++..+...... ..+. ...++. ....+.|.+++..|.|.
T Consensus 9 ~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~--~~~~-~~~~~~--~~~~l~i~~v~~~d~G~ 83 (217)
T 2vr9_A 9 SPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKK--SHRV-QFKDGA--LFFYRTMQGKKEQDGGE 83 (217)
T ss_dssp CCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSS--SSEE-ECTTSC--EEESSCCBSSSCBCCEE
T ss_pred CCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCcc--ceeE-EecCCc--eEEEEEeccCCcccCce
Confidence 456666667788899999999999999999999999999887654211 1122 222221 12245788999999999
Q ss_pred EEEEEecCCCce-eEEEEEEEEE
Q psy1672 334 FYCVAENRAGIA-DANFTLQVTY 355 (600)
Q Consensus 334 Y~C~a~N~~G~~-~~~v~L~V~~ 355 (600)
|+|.|.|..|.. ...+.+.|..
T Consensus 84 Y~C~~~n~~g~~~~~~~~l~v~~ 106 (217)
T 2vr9_A 84 YWCVAKNRVGQAVSRHASLQIAV 106 (217)
T ss_dssp EEEEEEETTEEEECCCEEEEECE
T ss_pred EEEEEecCCCccccccceEEEEE
Confidence 999999998865 3345565543
No 286
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.41 E-value=4.2e-07 Score=101.71 Aligned_cols=75 Identities=20% Similarity=0.322 Sum_probs=64.9
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+....+..|+.+.|.|.+.|.|.+.+.|+++|..+... ..|.|.+++..|.|.|+|.|.|
T Consensus 566 ~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~--------------------~~L~i~~~~~~d~G~Y~C~a~N 625 (642)
T 1e07_A 566 PPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHT--------------------QVLFIAKITPNNNGTYACFVSN 625 (642)
T ss_pred CCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccC--------------------ceEEECcccccCCeEEEEEEEe
Confidence 34566788999999999999999999999998766431 2689999999999999999999
Q ss_pred CCCceeEEEEEEEEE
Q psy1672 341 RAGIADANFTLQVTY 355 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~ 355 (600)
..|.+..++.|.|..
T Consensus 626 ~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 626 LATGRNNSIVKSITV 640 (642)
T ss_pred cccCcceeEEEEEEE
Confidence 999999888888854
No 287
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.41 E-value=3.3e-07 Score=84.98 Aligned_cols=87 Identities=14% Similarity=0.178 Sum_probs=62.6
Q ss_pred cccccccccceeeeEeec--CCCCeeEEEEcCeeccCC----cccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 263 YVEAVSSENATVVCRVDS--IPPAAISWYWNGRLLLNN----TAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g--~P~p~i~W~~~g~~l~~~----~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
.+.+.+|+.++|.|...+ .+.+.|.|++++..+... ..+....+..+..++ .|.|.+++.+|+|.|+|
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g------sL~I~~v~~~D~G~Y~C 78 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG------DLKIKNLTRDDSGTYNV 78 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS------CEEESSCCGGGCEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC------cEEEcccccccCEEEEE
Confidence 456788999999995443 566799999988654310 111122344444443 69999999999999999
Q ss_pred EEecCCCce--eEEEEEEEEE
Q psy1672 337 VAENRAGIA--DANFTLQVTY 355 (600)
Q Consensus 337 ~a~N~~G~~--~~~v~L~V~~ 355 (600)
.|.|..|.. +..+.|.|..
T Consensus 79 ~~~n~~g~~~~~~~~~l~V~~ 99 (176)
T 1hng_A 79 TVYSTNGTRILNKALDLRILE 99 (176)
T ss_dssp EEEETTCCEEEEEEEEEEEEC
T ss_pred EEEeCCCCEEEEEEEEEEEeC
Confidence 999999986 6667777754
No 288
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.41 E-value=1.4e-07 Score=89.70 Aligned_cols=76 Identities=13% Similarity=0.202 Sum_probs=58.2
Q ss_pred ccccccccceeeeEeecC-CCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec-C
Q psy1672 264 VEAVSSENATVVCRVDSI-PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN-R 341 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N-~ 341 (600)
..+.+|+.++|.|.+.+. |.+.+.|+++|+.+.... ..+.|.|.+++.+|.|.|+|.|.| .
T Consensus 98 ~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~-----------------~~~~L~i~~v~~~D~G~Y~C~a~n~~ 160 (204)
T 3sgj_C 98 WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFH-----------------HNSDFYIPKATLKDSGSYFCRGLVGS 160 (204)
T ss_dssp SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEE-----------------ECCCEEESSCCGGGCEEEEEEEEETT
T ss_pred eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeeccc-----------------CCceEEECcCCcccCEEEEEEEEeCC
Confidence 567789999999999755 568999999987653110 124799999999999999999999 4
Q ss_pred CCceeEEEEEEEEEc
Q psy1672 342 AGIADANFTLQVTYR 356 (600)
Q Consensus 342 ~G~~~~~v~L~V~~~ 356 (600)
.+..+..+.|.|...
T Consensus 161 ~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 161 KNVSSETVQITITQG 175 (204)
T ss_dssp EEEECCCEEEEEEC-
T ss_pred CceecCcEEEEEeCc
Confidence 445566677777543
No 289
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.40 E-value=7e-07 Score=86.28 Aligned_cols=88 Identities=27% Similarity=0.467 Sum_probs=68.8
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+..+.+..|+.+.|.|.+.+.|.+.+.|+++++.+....... ...... ....|.|.+++..|.|.|+|.|.|
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~---~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~~ 93 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIG---GIKLRH-----QQWSLVMESVVPSDRGNYTCVVEN 93 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTT---CCEEEG-----GGTEEEECSCCGGGCEEEEEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCccc---ceeeec-----cceEEEEEeCCcccCEEEEEEEee
Confidence 345778899999999999999999999999998876443211 111111 124799999999999999999999
Q ss_pred CCCceeEEEEEEEEEc
Q psy1672 341 RAGIADANFTLQVTYR 356 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~~ 356 (600)
..|.....+.+.|...
T Consensus 94 ~~~~~~~~~~l~V~~~ 109 (241)
T 3grw_A 94 KFGSIRQTYTLDVLER 109 (241)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred cCCceEEEEEEEEecc
Confidence 9998888888888653
No 290
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.40 E-value=3.9e-07 Score=85.91 Aligned_cols=80 Identities=16% Similarity=0.227 Sum_probs=61.3
Q ss_pred ccccccccccceeeeEe-ecCCCCeeEEEEcCe--eccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 262 RYVEAVSSENATVVCRV-DSIPPAAISWYWNGR--LLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v-~g~P~p~i~W~~~g~--~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
....+..|+.+.|.|.+ .+.|.+.+.|++++. .+...... ....+.|.|.+++.+|.|.|+|.|
T Consensus 129 ~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~-------------~~~~~~L~i~~~~~~d~G~Y~C~a 195 (214)
T 3jz7_A 129 VDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA-------------EMTSPVISVKNASSEYSGTYSCTV 195 (214)
T ss_dssp EESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG-------------GTTSSEEEECSCCGGGCEEEEEEE
T ss_pred eecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee-------------ccCCCEEEEecCCHHHCEEEEEEE
Confidence 33447789999999999 799999999999543 22211100 001237999999999999999999
Q ss_pred ecCCCceeEEEEEEEE
Q psy1672 339 ENRAGIADANFTLQVT 354 (600)
Q Consensus 339 ~N~~G~~~~~v~L~V~ 354 (600)
.|..|..+..+.|.|.
T Consensus 196 ~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 196 QNRVGSDQCMLRLDVV 211 (214)
T ss_dssp ECSSCEEEEEEEECCB
T ss_pred EcCCCcEEEEEEEEEe
Confidence 9999999888888774
No 291
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.39 E-value=4.2e-07 Score=91.38 Aligned_cols=79 Identities=20% Similarity=0.342 Sum_probs=63.7
Q ss_pred ccccccccceeeeEeecCCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
..+..|+.+.|.|.+.+.|.+ .+.|+++++.+..... ..+. .+ .+.|.|.+++.+|.|.|+|.|.|..
T Consensus 231 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~------~~~~-~~----~~~L~I~~v~~~d~G~Y~C~a~N~~ 299 (312)
T 2y23_A 231 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK------HDFK-DG----ICTLLITEFSKKDAGIYEVILKDDR 299 (312)
T ss_dssp EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECC------C-----C----EEEEEECSCSGGGCEEEEEEEESTT
T ss_pred EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCc------EEEE-CC----EEEEEECcCCHHHCEEEEEEEEcCC
Confidence 567889999999999999988 9999999988764321 1111 11 3589999999999999999999999
Q ss_pred CceeEEEEEEE
Q psy1672 343 GIADANFTLQV 353 (600)
Q Consensus 343 G~~~~~v~L~V 353 (600)
|.....+.|.+
T Consensus 300 G~~~~~~~l~i 310 (312)
T 2y23_A 300 GKDKSRLKLVD 310 (312)
T ss_dssp CCEEEEEEECS
T ss_pred CceeeeeEEEe
Confidence 99998887754
No 292
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.39 E-value=4.2e-07 Score=85.73 Aligned_cols=77 Identities=21% Similarity=0.428 Sum_probs=60.7
Q ss_pred ccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCce
Q psy1672 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIA 345 (600)
Q Consensus 266 v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~ 345 (600)
+..|+.+.|.|.+.+.| +.+.|+++++.+.... ++.+..++ +.|.|.+++..|.|.|+|.|.|..|..
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~------~~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 189 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTE------RMTLSQNN-----SILRIDPIKREDAGEYQCEISNPVSVR 189 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCS------SEEEETTT-----TEEEESSCCGGGCEEEEEEEECTTCCE
T ss_pred EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCC------CeEEcCCC-----CEEEEeccCHHhCeEEEEEEecCCCcc
Confidence 78899999999999866 7999999998776432 33333332 479999999999999999999999986
Q ss_pred e-EEEEEEEE
Q psy1672 346 D-ANFTLQVT 354 (600)
Q Consensus 346 ~-~~v~L~V~ 354 (600)
. ..+.|.|.
T Consensus 190 ~s~~~~l~v~ 199 (208)
T 3r4d_A 190 RSNSIKLDII 199 (208)
T ss_dssp ECCCEEECCC
T ss_pred cCCceeeeEE
Confidence 4 44666553
No 293
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.39 E-value=1.1e-06 Score=83.81 Aligned_cols=82 Identities=12% Similarity=0.236 Sum_probs=60.4
Q ss_pred cccccccccccceeeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEe
Q psy1672 261 SRYVEAVSSENATVVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAE 339 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~ 339 (600)
+..+++.+|+.+.|.|.+. +.|.|+|.|+++|+.+..... .++.. ++. .....|.|.+++.+|+|.|+|.|.
T Consensus 9 ~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~----~~~~~--~~~-~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 9 ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPK----YKMHI--DRN-TGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSS----CEEEE--CTT-TCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCC----EEEEE--eCC-CCEEEEEECCCChhhCEEEEEEEE
Confidence 3457788999999999997 579999999999998865431 12222 210 112369999999999999999999
Q ss_pred cCCCceeEEEEE
Q psy1672 340 NRAGIADANFTL 351 (600)
Q Consensus 340 N~~G~~~~~v~L 351 (600)
| |.+.....+
T Consensus 82 N--g~a~~~~~~ 91 (207)
T 3rbs_A 82 D--GKATNHSTV 91 (207)
T ss_dssp E--TTEEEEEEE
T ss_pred C--CCeEEEEEE
Confidence 9 555544444
No 294
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.39 E-value=4.4e-07 Score=88.13 Aligned_cols=91 Identities=21% Similarity=0.423 Sum_probs=60.2
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceE---------EEeeC--Ccee--eeeeEEEecCC
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRI---------FVIEQ--GEYE--RKSSLVLTNAQ 327 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~---------~~~~~--g~~~--~~s~L~I~~v~ 327 (600)
+..+.+.+|+.+.|.|.+.+.|.|.|.|++++..+.....+. +..+ ..... .... ..+.|.|.+++
T Consensus 143 ~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 221 (250)
T 2fbo_J 143 AEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGT-YQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAK 221 (250)
T ss_dssp CSEEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCE-EEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCC
T ss_pred CceEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCc-ceeEeccCCCCccccCceEecccccCCccEEEEecCC
Confidence 345667789999999999999999999999988764322110 0000 00000 0000 12589999999
Q ss_pred CCCCeEEEEEEecCCC---ceeEEEEEE
Q psy1672 328 ESDSGRFYCVAENRAG---IADANFTLQ 352 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~~G---~~~~~v~L~ 352 (600)
.+|.|.|+|.|.|.+| .....+.|.
T Consensus 222 ~~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 222 ITDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp GGGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred cccCEEEEEEecCCccccCccceeEEEe
Confidence 9999999999999655 444444443
No 295
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.39 E-value=7.5e-07 Score=84.48 Aligned_cols=80 Identities=13% Similarity=0.194 Sum_probs=60.6
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEcC-eeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWNG-RLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~g-~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
+.+.+|+.++|.|.+.|.|.|.|.|.+.. ..+. .+... .. ..+.|.|.+++..|.|.|+|.|.|..
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--------~~~~~-~~----~~~~L~I~~v~~~D~G~Y~C~a~n~~ 77 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--------GKVTN-EG----TTSTLTMNPVSFGNEHSYLCTATCES 77 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--------SEEEE-ET----TEEEEEESSCCGGGCSEEEEEEEETT
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--------ceEEE-cC----CccEEEECcCCHHHCEEEEEEEEECC
Confidence 34558999999999999999999998832 1111 11111 11 12469999999999999999999999
Q ss_pred CceeEEEEEEEEEc
Q psy1672 343 GIADANFTLQVTYR 356 (600)
Q Consensus 343 G~~~~~v~L~V~~~ 356 (600)
|..+..+.|.|...
T Consensus 78 ~~~~~~~~l~V~~~ 91 (202)
T 1vca_A 78 RKLEKGIQVEIYSF 91 (202)
T ss_dssp EEEEEEEEEEEEBC
T ss_pred ceEeeEEEEEEEeC
Confidence 98888888888654
No 296
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.38 E-value=6.4e-08 Score=107.32 Aligned_cols=154 Identities=13% Similarity=0.046 Sum_probs=80.3
Q ss_pred ceEEEeeCCCCCC-CChhhhcccCCCCccEEEeec-----------ccCcccCc-cccCCCCCccEEEccCCCCCCCCcc
Q psy1672 51 TQVLDMSGNNLQI-LPKEAFRRAGLLNLQKLFLAR-----------CHIGQIDS-GALDGLTNLIEIDLSDNLLTSIPSL 117 (600)
Q Consensus 51 l~~L~Ls~n~L~~-l~~~~f~~~~l~~L~~L~L~~-----------n~l~~i~~-~~f~~l~~L~~L~Ls~N~l~~l~~~ 117 (600)
+++|+++ +.+.. .....+. .+++|++|+|++ +.++.... ..+.++++|++|+++.|.++.....
T Consensus 320 L~~L~L~-~~~~~~~l~~~~~--~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~ 396 (592)
T 3ogk_B 320 LEVLETR-NVIGDRGLEVLAQ--YCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLE 396 (592)
T ss_dssp CCEEEEE-GGGHHHHHHHHHH--HCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHH
T ss_pred CCEEecc-CccCHHHHHHHHH--hCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHH
Confidence 7788877 33331 1122222 467777777773 34443211 1133467777777776666643222
Q ss_pred ccC-CCCCCCEEEcc----CCCCCccCc-----ccccCCCCcceeeCCCCc--CcccChhhh-cCCCCCCEEEcCCCcCC
Q psy1672 118 TFQ-SVRFLRDLNLA----RNPISKIEK-----GAFQFVPGLVKLDMSESR--LEHISPEAF-TGAKSLESIKLNGNRLS 184 (600)
Q Consensus 118 ~f~-~l~~L~~L~Ls----~N~i~~l~~-----~~~~~l~~L~~L~Ls~n~--l~~i~~~~~-~~l~~L~~L~Ls~N~l~ 184 (600)
.+. .+++|+.|+++ .|.++..+. ..+..+++|+.|+++.|. +.......+ ..+++|+.|+|++|.++
T Consensus 397 ~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~ 476 (592)
T 3ogk_B 397 SIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGES 476 (592)
T ss_dssp HHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSS
T ss_pred HHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCC
Confidence 222 25667777775 455554311 124456667777765432 333222222 23666777777776665
Q ss_pred CCC-cccccccccccEEEccCCcC
Q psy1672 185 HFP-VRSVEPLLKLMMIELHDNPW 207 (600)
Q Consensus 185 ~l~-~~~~~~l~~L~~L~l~~N~~ 207 (600)
... ...+..+++|+.|++.+|++
T Consensus 477 ~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 477 DEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp HHHHHHHHTCCTTCCEEEEESCCC
T ss_pred HHHHHHHHhcCcccCeeeccCCCC
Confidence 422 12234556677777777664
No 297
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.38 E-value=5.6e-07 Score=86.07 Aligned_cols=85 Identities=16% Similarity=0.313 Sum_probs=68.3
Q ss_pred cccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..+.+...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.... .+.|.|.+++..|.|
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~------------------~~~L~i~~v~~~d~G 78 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN------------------TSELIFNAVHVKDAG 78 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC------------------SSEEEETTCCGGGCE
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC------------------CCEEEEccCChhhCe
Confidence 34666677788889999999999999999999999999987764321 237999999999999
Q ss_pred EEEEEEecCCCce-eEEEEEEEEE
Q psy1672 333 RFYCVAENRAGIA-DANFTLQVTY 355 (600)
Q Consensus 333 ~Y~C~a~N~~G~~-~~~v~L~V~~ 355 (600)
.|+|.|.|..|.. +..+.|.|..
T Consensus 79 ~Y~C~~~n~~~~~~s~~~~l~V~~ 102 (218)
T 3k0w_A 79 FYVCRVNNNFTFEFSQWSQLDVCD 102 (218)
T ss_dssp EEEEEEECTTCCEECCCEEEEEEC
T ss_pred EeEEEEEcCCCCceeeEEEEEEEc
Confidence 9999999998865 4556676643
No 298
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.37 E-value=4.2e-07 Score=92.58 Aligned_cols=92 Identities=23% Similarity=0.295 Sum_probs=67.6
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEE----cCeeccCCcccCccceEEEeeCCc----eeeeeeEEEecCCCCCCeE
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYW----NGRLLLNNTAFSSYQRIFVIEQGE----YERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~----~g~~l~~~~~~~~~~~~~~~~~g~----~~~~s~L~I~~v~~~d~G~ 333 (600)
....+..|+.+.|.|.+.|.|.+.+.|++ +|..+..... ....+...+. ....+.|.|.+++..|.|.
T Consensus 230 ~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 305 (334)
T 1ry7_B 230 ANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGT----PYVTVLKTAGANTTDKELEVLSLHNVTFEDAGE 305 (334)
T ss_dssp CCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSS----BCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSE
T ss_pred CceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCC----eeEEEeecCccccccccccEEEEccCCHHHCEE
Confidence 45567889999999999999999999999 6665543221 0011111110 0112479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEcc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
|+|.|.|..|.....+.|.|...+
T Consensus 306 Y~C~a~N~~G~~~~~~~l~V~~~~ 329 (334)
T 1ry7_B 306 YTCLAGNSIGFSHHSAWLVVLPAE 329 (334)
T ss_dssp EEEEEEESSCCEEEEEEEEEECSC
T ss_pred EEEEEeCCCCeEEEEEEEEEEECC
Confidence 999999999999999999986544
No 299
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.37 E-value=6.5e-07 Score=85.43 Aligned_cols=87 Identities=16% Similarity=0.208 Sum_probs=60.4
Q ss_pred ccccccccceeeeEe-ecCCCCeeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 264 VEAVSSENATVVCRV-DSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v-~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+..|+.++|.|.+ .+.|.+.+.|++ ++..+.... .......+. .....|.|.+++..|.|.|+|.|.|.
T Consensus 120 ~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~------~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y~C~a~n~ 192 (222)
T 4i0k_A 120 KDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNV------TTSQMANER-GLFDVHSVLRVVLGANGTYSCLVRNP 192 (222)
T ss_dssp ----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEE------EEEEEECTT-SCEEEEEEEEEECCTTCEEEEEEEET
T ss_pred ceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCc------ceeEEcCCC-CeEEEEEEEEEEeCCCCEEEEEEECC
Confidence 356789999999999 789999999998 554443211 111111111 11235789999999999999999999
Q ss_pred CCceeEEEEEEEEEcc
Q psy1672 342 AGIADANFTLQVTYRG 357 (600)
Q Consensus 342 ~G~~~~~v~L~V~~~~ 357 (600)
.|.....+.|.|...+
T Consensus 193 ~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 193 VLQQDAHGSVTITGQP 208 (222)
T ss_dssp TTTEEEEEEEECCC--
T ss_pred CCCCceEEEEEEeCCc
Confidence 9999999999886554
No 300
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.37 E-value=9.2e-07 Score=75.54 Aligned_cols=86 Identities=15% Similarity=0.125 Sum_probs=59.8
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCC-----------ccc--CccceEEEeeCCceeeeeeEEEecCCCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNN-----------TAF--SSYQRIFVIEQGEYERKSSLVLTNAQES 329 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~-----------~~~--~~~~~~~~~~~g~~~~~s~L~I~~v~~~ 329 (600)
...+.+|+++.|.|.....+.+.+.|++........ ... .-.+|..++.+| +|.|.+++.+
T Consensus 9 p~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ng------SL~I~nvt~~ 82 (111)
T 2qsq_A 9 PFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNA------SLLIQNIIQN 82 (111)
T ss_dssp SSEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTS------CEEECSCCGG
T ss_pred cceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCC------cEEEccCccc
Confidence 346789999999998643344579999854321100 000 012455555555 8999999999
Q ss_pred CCeEEEEEEecCCC-ceeEEEEEEEE
Q psy1672 330 DSGRFYCVAENRAG-IADANFTLQVT 354 (600)
Q Consensus 330 d~G~Y~C~a~N~~G-~~~~~v~L~V~ 354 (600)
|+|.|+|.+.|..+ ..+..+.|.|.
T Consensus 83 D~G~Ytc~v~~~~~~~~~~~~~L~V~ 108 (111)
T 2qsq_A 83 DAGFYTLHVIKSDLVNEEATGQFRVY 108 (111)
T ss_dssp GCEEEEEEEEETTSCCEEEEEEEEEE
T ss_pred CCeEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999977 46777888774
No 301
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.36 E-value=2.2e-07 Score=86.15 Aligned_cols=65 Identities=18% Similarity=0.183 Sum_probs=53.1
Q ss_pred cccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCceeEE
Q psy1672 269 SENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADAN 348 (600)
Q Consensus 269 G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~ 348 (600)
+..++|.|.+.|.|.|.|.|+++|+.+.... .+.|.+++..|.|.|+|.|.|.+|..+..
T Consensus 110 ~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~--------------------~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~ 169 (176)
T 1hng_A 110 CSNATLTCEVLEGTDVELKLYQGKEHLRSLR--------------------QKTMSYQWTNLRAPFKCKAVNRVSQESEM 169 (176)
T ss_dssp TTTTEEEEECSSCSSCEEEEEETTEEEEEES--------------------SSEEEEECSCCSSCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEecCCCCcEEEEEECCEECCCCC--------------------cEEEEEEEccCCeEEEEEEEecCCCceec
Confidence 4569999999999999999999987664321 24556788999999999999999998887
Q ss_pred EEEEE
Q psy1672 349 FTLQV 353 (600)
Q Consensus 349 v~L~V 353 (600)
+.|.|
T Consensus 170 ~~l~~ 174 (176)
T 1hng_A 170 EVVNC 174 (176)
T ss_dssp ECCCC
T ss_pred ccccC
Confidence 76654
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.36 E-value=9.8e-08 Score=105.80 Aligned_cols=151 Identities=11% Similarity=0.069 Sum_probs=86.4
Q ss_pred ceEEEeeCCC-CC--CCChhhhcccCCCCccEEEeecccCcccCc----cccCCCCCccEEEccCCCCCCCCcc----cc
Q psy1672 51 TQVLDMSGNN-LQ--ILPKEAFRRAGLLNLQKLFLARCHIGQIDS----GALDGLTNLIEIDLSDNLLTSIPSL----TF 119 (600)
Q Consensus 51 l~~L~Ls~n~-L~--~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~----~~f~~l~~L~~L~Ls~N~l~~l~~~----~f 119 (600)
+++|+|++|. +. .+.. ... .+++|++|+|++|.+..... ..+..+++|++|+|++|.++.+... .+
T Consensus 140 L~~L~L~~~~~~~~~~l~~-~~~--~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~ 216 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLS-IVT--HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIA 216 (592)
T ss_dssp CCEEEEESCEEEEHHHHHH-HHH--HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHH
T ss_pred CcEEECcCCCCcCHHHHHH-HHh--hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHH
Confidence 8889998876 21 1111 111 57888999998887655422 2345678888888888888744432 23
Q ss_pred CCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCc---ccChhhhcCCCCCCEEEcCCCcCCCCCccccccccc
Q psy1672 120 QSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLE---HISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196 (600)
Q Consensus 120 ~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~---~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~ 196 (600)
..+++|+.|+|++|.+..+. ..+..+++|+.|+++..... ......+..+.+|+.|+++++....++ ..+..+++
T Consensus 217 ~~~~~L~~L~L~~~~~~~l~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~-~~~~~~~~ 294 (592)
T 3ogk_B 217 RNCRSLVSVKVGDFEILELV-GFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMP-ILFPFAAQ 294 (592)
T ss_dssp HHCTTCCEEECSSCBGGGGH-HHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGG-GGGGGGGG
T ss_pred hhCCCCcEEeccCccHHHHH-HHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHH-HHHhhcCC
Confidence 45788888888888777653 45666777777777642211 001122334445555555443333332 22334444
Q ss_pred ccEEEccCCc
Q psy1672 197 LMMIELHDNP 206 (600)
Q Consensus 197 L~~L~l~~N~ 206 (600)
|+.|++.+|.
T Consensus 295 L~~L~Ls~~~ 304 (592)
T 3ogk_B 295 IRKLDLLYAL 304 (592)
T ss_dssp CCEEEETTCC
T ss_pred CcEEecCCCc
Confidence 5555554444
No 303
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.36 E-value=1.3e-06 Score=91.37 Aligned_cols=126 Identities=13% Similarity=0.235 Sum_probs=68.1
Q ss_pred CCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeC
Q psy1672 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154 (600)
Q Consensus 75 ~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~L 154 (600)
..+..+.+... ...+...+|....+|+.+.+..+ ++.+....|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+
T Consensus 194 ~~~~~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 194 KTGTEFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 34444443322 23334444555556666555332 45555555555566666666544 55555555666666666555
Q ss_pred CCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccC
Q psy1672 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHD 204 (600)
Q Consensus 155 s~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~ 204 (600)
.. .+..+...+|.++.+|+.+.+.++.++.+....|..+.+|+.+.+.+
T Consensus 271 ~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 271 YA-KVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp CC-CCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred cc-cceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 43 35555555566666666666665556666555666666666665543
No 304
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.36 E-value=9.2e-07 Score=75.33 Aligned_cols=95 Identities=17% Similarity=0.269 Sum_probs=62.1
Q ss_pred cccccccccccceeeeEee-cCCCC----eeEEEEcCeeccCCc-------ccCccceEEEeeCCcee--eeeeEEEecC
Q psy1672 261 SRYVEAVSSENATVVCRVD-SIPPA----AISWYWNGRLLLNNT-------AFSSYQRIFVIEQGEYE--RKSSLVLTNA 326 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~-g~P~p----~i~W~~~g~~l~~~~-------~~~~~~~~~~~~~g~~~--~~s~L~I~~v 326 (600)
+..+.+..|+.++|.|.+. +.+.+ .+.|++++....... .+....+..+..+.... ....|.|.++
T Consensus 7 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (118)
T 3udw_C 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSC
T ss_pred CCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeec
Confidence 3447788999999999995 44444 399999743211000 00012233332221000 1458999999
Q ss_pred CCCCCeEEEEEEec-CCCceeEEEEEEEEE
Q psy1672 327 QESDSGRFYCVAEN-RAGIADANFTLQVTY 355 (600)
Q Consensus 327 ~~~d~G~Y~C~a~N-~~G~~~~~v~L~V~~ 355 (600)
+.+|+|.|+|.+.+ ..|.....+.|.|..
T Consensus 87 ~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~ 116 (118)
T 3udw_C 87 RVEDEGNYTCLFVTFPQGSRSVDIWLRVLA 116 (118)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ChHHCeEEEEEEEECCCCCccceEEEEEEe
Confidence 99999999999999 778778888888754
No 305
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.36 E-value=9e-07 Score=93.17 Aligned_cols=126 Identities=21% Similarity=0.363 Sum_probs=94.4
Q ss_pred CccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCC
Q psy1672 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155 (600)
Q Consensus 76 ~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls 155 (600)
.+..+.+. +.+..+...+|.++.+|+.+.+..+ +..+....|.++..|+.+.+. +.++.+...+|.++.+|+.+.|.
T Consensus 243 ~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~-~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp 319 (394)
T 4gt6_A 243 EDPAFKIP-NGVARIETHAFDSCAYLASVKMPDS-VVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIP 319 (394)
T ss_dssp CCSEEECC-TTEEEECTTTTTTCSSCCEEECCTT-CCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECC
T ss_pred ccceEEcC-CcceEcccceeeecccccEEecccc-cceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeC
Confidence 34444443 3456677778888888888888544 556777788888888888885 45777877888888888888886
Q ss_pred CCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCCc
Q psy1672 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206 (600)
Q Consensus 156 ~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N~ 206 (600)
.+ ++.|...+|.++.+|+.+.|..+ ++.+....|..+.+|+.+++.++.
T Consensus 320 ~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 320 EG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred Cc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 53 77788888888888888888654 778888888888888888887764
No 306
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.36 E-value=1.2e-06 Score=91.25 Aligned_cols=94 Identities=23% Similarity=0.417 Sum_probs=71.5
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+........+..|+.+.|.|.+.|.|.+.+.|+++++.+.... ..++.+..++ ..+.|.|.+++..|.|.|
T Consensus 101 P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~----~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y 173 (389)
T 2jll_A 101 PKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKN----TTNLKTYSTG---RKMILEIAPTSDNDFGRY 173 (389)
T ss_dssp EEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTT----CTTEEEEECS---SCEEEEECCCSTTSSEEE
T ss_pred CEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCccc----CceEEEeccC---CEEEEEECCCChhhCEEE
Confidence 444333334467789999999999999999999999998876533 1233444333 235799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~~ 355 (600)
+|.|.|..|.....+.+.+..
T Consensus 174 ~C~a~N~~G~~~~~~~l~v~~ 194 (389)
T 2jll_A 174 NCTATNHIGTRFQEYILALAD 194 (389)
T ss_dssp EEEEEETTEEEEEEEEEEECC
T ss_pred EEEEEcCCCcEEEEEEEEecC
Confidence 999999999988877776643
No 307
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.35 E-value=9.2e-07 Score=83.28 Aligned_cols=93 Identities=13% Similarity=0.299 Sum_probs=65.9
Q ss_pred cccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCc------ccCccceEEEeeCCceeeeeeEEEecCCCCC
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNT------AFSSYQRIFVIEQGEYERKSSLVLTNAQESD 330 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~------~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d 330 (600)
+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ......+.... .+.|.|.+++..|
T Consensus 4 v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-------~~~L~i~~v~~~D 76 (212)
T 1f97_A 4 VYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-------SSGITFSSVTRKD 76 (212)
T ss_dssp EECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-------TTEEEESCCCGGG
T ss_pred EEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-------ceeEEEcccCccc
Confidence 3445667788999999999999999999999999765421100 00001122221 2479999999999
Q ss_pred CeEEEEEEecCCC--ceeEEEEEEEEEc
Q psy1672 331 SGRFYCVAENRAG--IADANFTLQVTYR 356 (600)
Q Consensus 331 ~G~Y~C~a~N~~G--~~~~~v~L~V~~~ 356 (600)
.|.|+|.|.|..| ..+..+.|.|...
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~ 104 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTVLVP 104 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEEEBC
T ss_pred CeEEEEEEEccCCCcccEEEEEEEEEcC
Confidence 9999999999987 4456667776543
No 308
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.35 E-value=1.4e-06 Score=87.34 Aligned_cols=87 Identities=28% Similarity=0.350 Sum_probs=69.1
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEec-CCCCCCeEEEEEEec
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN-AQESDSGRFYCVAEN 340 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~-v~~~d~G~Y~C~a~N 340 (600)
....+..|+.+.|.|.+.|.|.+.+.|++++..+.... +..+...+ ....|.|.+ ++..|.|.|+|.|.|
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~------~~~~~~~~---~~~~l~i~~~~~~~d~G~Y~C~a~N 182 (305)
T 2nzi_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNG------HYQVIVTR---SFTSLVFPNGVERKDAGFYVVCAKN 182 (305)
T ss_dssp CCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSS------SCEEEECS---SEEEEEETTCCCSTTCEEEEEEEEE
T ss_pred ccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCC------cEEEEEcC---CceEEEEecCCccCccEEEEEEEEe
Confidence 34567789999999999999999999999988765432 22222222 135789999 999999999999999
Q ss_pred CCCceeEEEEEEEEEcc
Q psy1672 341 RAGIADANFTLQVTYRG 357 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~~~ 357 (600)
..|.....+.|.|...+
T Consensus 183 ~~G~~~~~~~l~v~~~P 199 (305)
T 2nzi_A 183 RFGIDQKTVELDVADVP 199 (305)
T ss_dssp TTEEEEEEEEEEEEBCC
T ss_pred CCCceeeEEEEEEecCC
Confidence 99999999888887544
No 309
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.34 E-value=2.1e-07 Score=74.65 Aligned_cols=60 Identities=27% Similarity=0.489 Sum_probs=48.5
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecC-CCCCCeEEEEEEe
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA-QESDSGRFYCVAE 339 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v-~~~d~G~Y~C~a~ 339 (600)
+....+..|+.++|.|.+.|.|. |+|+++|+.+... .+ +.|.|.++ ..+|+|.|+|.|.
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~------------~~------~~L~I~~v~~~~DsG~Y~C~A~ 65 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK------------HD------KHLVLQDFSEVEDSGYYVCYTP 65 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC------------CS------SCCBCCSCCTTTTCSCEEEECS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC------------CC------CEEEECccCccCcCEEEEEEEc
Confidence 45566678999999999999883 9999999877532 11 36899996 7899999999997
Q ss_pred c
Q psy1672 340 N 340 (600)
Q Consensus 340 N 340 (600)
+
T Consensus 66 t 66 (82)
T 3r08_E 66 A 66 (82)
T ss_dssp S
T ss_pred c
Confidence 6
No 310
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.34 E-value=5.6e-07 Score=84.46 Aligned_cols=88 Identities=14% Similarity=0.164 Sum_probs=62.5
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+.. .+..|+.++|.|.+.+ +.+.+.|++++..+.... ..... ....+.|.|.+++.+|+|.|
T Consensus 6 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-------~~~~~---~~~~~~L~i~~v~~~D~G~Y 73 (196)
T 3p2t_A 6 PTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR-------QNPLE---PKNKARFSIPSMTEDYAGRY 73 (196)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE-------ECCCS---SSSEEEEEESSCCGGGCEEE
T ss_pred CEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc-------ccccc---CCceEEEEeccCCcccCceE
Confidence 444444444 6788999999999998 778999999887654211 00000 01235799999999999999
Q ss_pred EEEEecCCCc--eeEEEEEEEE
Q psy1672 335 YCVAENRAGI--ADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~--~~~~v~L~V~ 354 (600)
+|.|.|..|. .+..+.|.|.
T Consensus 74 ~C~a~n~~g~~~~s~~~~l~V~ 95 (196)
T 3p2t_A 74 RCYYRSPVGWSQPSDPLELVMT 95 (196)
T ss_dssp EEEEEETTEEBCCCCCEEEEEE
T ss_pred EEEEeCCCcccCCCccEEEEec
Confidence 9999999883 3455666664
No 311
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.33 E-value=2.4e-06 Score=89.94 Aligned_cols=135 Identities=21% Similarity=0.322 Sum_probs=96.7
Q ss_pred CCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCCCCccCcc
Q psy1672 62 QILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKG 141 (600)
Q Consensus 62 ~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~ 141 (600)
+.|....|. ++.+|+.+.+..+ +..+...+|.....|+.+.+..+. ++...|..+.+|+.+.+..+ ++.+...
T Consensus 242 ~~i~~~~f~--~~~~l~~~~~~~~-~~~i~~~~F~~~~~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~ 314 (394)
T 4fs7_A 242 TELGKSVFY--GCTDLESISIQNN-KLRIGGSLFYNCSGLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEE 314 (394)
T ss_dssp CEECSSTTT--TCSSCCEEEECCT-TCEECSCTTTTCTTCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTT
T ss_pred eeccccccc--ccccceeEEcCCC-cceeeccccccccccceeccCcee---eccccccccccccccccccc-cceechh
Confidence 344444444 5556666665544 334555556666666665554432 45556777888888888655 7788888
Q ss_pred cccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEEEccCC
Q psy1672 142 AFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205 (600)
Q Consensus 142 ~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~l~~N 205 (600)
+|.++.+|+.++|.. .++.|...+|.++.+|+.++|..+ ++.+....|..+.+|+.+.+..+
T Consensus 315 aF~~c~~L~~i~lp~-~v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 315 AFESCTSLVSIDLPY-LVEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTTTCTTCCEECCCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred hhcCCCCCCEEEeCC-cccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 888889999998864 488888888988999999998876 88888888888888988887654
No 312
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.33 E-value=7.8e-07 Score=81.90 Aligned_cols=79 Identities=19% Similarity=0.391 Sum_probs=61.4
Q ss_pred cccccccccccccccccceeeeEeecCCCCe-eEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAA-ISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
|.+...+....+.+|+.++|.|.+.+.|.+. +.|+++++.+... .+.|.|.+++..|.|.
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~-------------------~~~L~i~~~~~~d~G~ 68 (175)
T 1fnl_A 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ-------------------ASSYFIDAATVNDSGE 68 (175)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS-------------------CSEEEESSCCGGGCEE
T ss_pred CEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC-------------------ceEEEEeCCCcccCEE
Confidence 4555556666788999999999999988776 8899998766421 1379999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|+|.+.|..+.. .+.+.|.
T Consensus 69 Y~C~~~n~~~s~--~~~l~V~ 87 (175)
T 1fnl_A 69 YRCQTNLSTLSD--PVQLEVH 87 (175)
T ss_dssp EEEECSSSCCCC--CEEEEEE
T ss_pred EEEEeeCCcccc--cEEEEEe
Confidence 999999966544 4555554
No 313
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.33 E-value=1e-06 Score=82.99 Aligned_cols=98 Identities=23% Similarity=0.378 Sum_probs=67.2
Q ss_pred cccccccccccccceeeeEeecCC----CCeeEEEEcC----------------eeccCCcccCccceEEEeeCCceeee
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIP----PAAISWYWNG----------------RLLLNNTAFSSYQRIFVIEQGEYERK 318 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P----~p~i~W~~~g----------------~~l~~~~~~~~~~~~~~~~~g~~~~~ 318 (600)
..+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ +.+... ......++.+..++.....
T Consensus 5 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~ 83 (214)
T 3jz7_A 5 TPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNY-YPDLKGRVHFTSNDVKSGD 83 (214)
T ss_dssp -CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCC-CGGGTTTEEESCSCGGGTB
T ss_pred cCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEcccc-CCccccceEEeccCccCCc
Confidence 344667889999999999999877 4699999833 211110 0001223333321111224
Q ss_pred eeEEEecCCCCCCeEEEEEEecCCCceeEEEEEEEEEcc
Q psy1672 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 319 s~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
..|.|.+++..|+|.|+|.|.|..|.....+.|.|...+
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p 122 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKP 122 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCC
Confidence 579999999999999999999999988888888886543
No 314
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.33 E-value=5.7e-07 Score=86.38 Aligned_cols=86 Identities=13% Similarity=0.163 Sum_probs=55.8
Q ss_pred cccccccccccceeeeEeec-CCCCeeEEEEcC-eeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 261 SRYVEAVSSENATVVCRVDS-IPPAAISWYWNG-RLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g-~P~p~i~W~~~g-~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
.....+..|..+.+.|.+.| .|.|+|.|++++ ..+.... .......++.+. .+.+.+++.+|.|.|+|+|
T Consensus 125 ~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~-----~~~~~~~~g~~~---v~s~l~v~~~d~G~YtC~a 196 (226)
T 4f80_A 125 HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVE-----APVVADGVGLYA---VAASVIMRGSSGEGVSCTI 196 (226)
T ss_dssp EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEE-----CCCEECTTSCEE---EEEEEEECC----CEEEEE
T ss_pred cceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCc-----eEEEECCCCcEE---EEEEEEechhcCcEEEEEE
Confidence 34456778999999999997 599999999954 4333211 111112223222 2334456788999999999
Q ss_pred ecCCCceeEEEEEEEE
Q psy1672 339 ENRAGIADANFTLQVT 354 (600)
Q Consensus 339 ~N~~G~~~~~v~L~V~ 354 (600)
+|.+|..++.+.|.|.
T Consensus 197 ~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 197 RSSLLGLEKTASISIA 212 (226)
T ss_dssp EETTTTEEEEEEECCC
T ss_pred EeCCCCeEEEEEEEEC
Confidence 9999999988888773
No 315
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.33 E-value=1.6e-06 Score=73.17 Aligned_cols=82 Identities=18% Similarity=0.354 Sum_probs=56.3
Q ss_pred ccccccccccccccceeeeEeecCCCCeeEEEEcC--ee---cc-CCcc--cCccceEEEeeCCceeeeeeEEEecCCCC
Q psy1672 258 RMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RL---LL-NNTA--FSSYQRIFVIEQGEYERKSSLVLTNAQES 329 (600)
Q Consensus 258 ~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~---l~-~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~v~~~ 329 (600)
...+..+.+.+|+.++|.|.+.+.|.+.+.|+++. .. +. .... .....++.+...+ ....|.|.+++.+
T Consensus 5 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~ 81 (108)
T 1jhl_L 5 TQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSG---TDFTLTISSLEPE 81 (108)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESS---SEEEEEECSCCTT
T ss_pred eccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecC---CEEEEEECCCCHH
Confidence 34456678899999999999999888999999943 21 11 0000 0011233332221 2458999999999
Q ss_pred CCeEEEEEEecCC
Q psy1672 330 DSGRFYCVAENRA 342 (600)
Q Consensus 330 d~G~Y~C~a~N~~ 342 (600)
|+|.|.|.|.|..
T Consensus 82 DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 82 DFAMYICQQHNEY 94 (108)
T ss_dssp CCSEEEEEECSSS
T ss_pred HCEEEEEEEccCC
Confidence 9999999999974
No 316
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.33 E-value=1.3e-06 Score=86.92 Aligned_cols=97 Identities=19% Similarity=0.291 Sum_probs=68.0
Q ss_pred ccccccccccccccccccceeeeEeecCCC-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPP-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...+....+..|+.+.|.|.+.+.|+ +.+.|++++..+.... . .....+.....+.|.|.+++.+|.|
T Consensus 186 ~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~------~-~~~~~~~~~~~~~L~i~~v~~~d~G 258 (292)
T 4dkd_C 186 PPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQ------Q-SDFHNNRYQKVLTLNLDQVDFQHAG 258 (292)
T ss_dssp SCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCB------E-EEEETTEEEEEEEEEESSCCTTSCE
T ss_pred CCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCc------c-ceeccceeeeEEEEEECccChhcCe
Confidence 444444555566678999999999998665 4577777776553222 1 1122222334568999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEcc
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
.|+|.|.|..|..+..+.|.|....
T Consensus 259 ~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 259 NYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp EEEEEEECSSCEEEEEEEECC----
T ss_pred EEEEEEecCCCCceeEEEEEEeeCC
Confidence 9999999999999999998886543
No 317
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.33 E-value=5.5e-07 Score=82.93 Aligned_cols=77 Identities=17% Similarity=0.216 Sum_probs=59.3
Q ss_pred cccccccccceeeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 263 YVEAVSSENATVVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
...+..|+.+.|.|.+. +.|.+.+.|+++|+.+.... ..+.|.|.+++.+|.|.|+|.|.|.
T Consensus 94 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~-----------------~~~~L~i~~v~~~d~G~Y~C~a~n~ 156 (176)
T 1f2q_A 94 AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY-----------------ENHNISITNATVEDSGTYYCTGKVW 156 (176)
T ss_dssp CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC-----------------CSSEEEESSCCGGGCEEEEEEEEET
T ss_pred cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec-----------------CCCeEEECCCCcccCEEEEEEEEeC
Confidence 35677899999999995 66778999999998764211 1237999999999999999999997
Q ss_pred CCc-eeEEEEEEEEEc
Q psy1672 342 AGI-ADANFTLQVTYR 356 (600)
Q Consensus 342 ~G~-~~~~v~L~V~~~ 356 (600)
.+. .+..+.|.|...
T Consensus 157 ~~~~~s~~~~l~V~~~ 172 (176)
T 1f2q_A 157 QLDYESEPLNITVIKA 172 (176)
T ss_dssp TEEEECCCEEEEEECS
T ss_pred CcceEecCEEEEEecC
Confidence 443 455577777544
No 318
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.32 E-value=1.5e-06 Score=72.08 Aligned_cols=102 Identities=15% Similarity=0.239 Sum_probs=65.5
Q ss_pred Ccccccccc-cccccccccccceeeeEeec-CCCCeeEEEEc-CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 252 ACKPEIRMD-SRYVEAVSSENATVVCRVDS-IPPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 252 ~C~p~i~~~-~~~~~v~~G~~v~L~C~v~g-~P~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
.|..++.+- .....+..|+.+.|.|.+.+ .+.|+|+|.+. ++....... ....+..+.+.++ .....|.|.++..
T Consensus 11 ~c~~ql~ikR~S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~-~~q~~~~w~e~~n-~s~fiL~f~~V~~ 88 (122)
T 1xau_A 11 ECEVQLNIKRNSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEV-GPQLYTSWEENRS-VPVFVLHFKPIHL 88 (122)
T ss_dssp -CCCEECCCTTEEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCC-BTTEEEEEECSSS-SCEEEEEETTCCG
T ss_pred ccceEEEEEeeccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeecccccc-ceeeecceeccCC-ceeEEEEEeeEEE
Confidence 365554433 34456789999999999975 67999999994 322111100 1112333444432 1234789999999
Q ss_pred CCCeEEEEEEecCCCce-eEEEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGIA-DANFTLQVTY 355 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~-~~~v~L~V~~ 355 (600)
.|+|.|+|.|.|..|.. +..+.+.|..
T Consensus 89 sDsG~YrCsAn~~~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 89 SDNGSYSCSTNFNSQVINSHSVTIHVRE 116 (122)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred cCCccEEEEeeCCCCceeeeEEEEEEEe
Confidence 99999999999988865 3445566643
No 319
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.32 E-value=1.1e-07 Score=105.49 Aligned_cols=153 Identities=15% Similarity=0.085 Sum_probs=70.1
Q ss_pred ceEEEeeCCCCCCC-ChhhhcccCCCCccEEEeec---------ccCcccCcccc-CCCCCccEEEccCCCCCCCCcccc
Q psy1672 51 TQVLDMSGNNLQIL-PKEAFRRAGLLNLQKLFLAR---------CHIGQIDSGAL-DGLTNLIEIDLSDNLLTSIPSLTF 119 (600)
Q Consensus 51 l~~L~Ls~n~L~~l-~~~~f~~~~l~~L~~L~L~~---------n~l~~i~~~~f-~~l~~L~~L~Ls~N~l~~l~~~~f 119 (600)
++.|++++| +... ...... .+++|+.|+|.+ +.++......+ .++++|++|++..|.++......+
T Consensus 316 L~~L~l~~~-~~~~~l~~l~~--~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 316 LQRLWVLDY-IEDAGLEVLAS--TCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp CCEEEEEGG-GHHHHHHHHHH--HCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred cCEEeCcCc-cCHHHHHHHHH--hCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 788888877 3311 111111 366777777733 23322211112 135566666666666553222222
Q ss_pred C-CCCCCCEEEcc--C----CCCCccCc-----ccccCCCCcceeeCCCCcCcccChhhhcC-CCCCCEEEcCCCcCCCC
Q psy1672 120 Q-SVRFLRDLNLA--R----NPISKIEK-----GAFQFVPGLVKLDMSESRLEHISPEAFTG-AKSLESIKLNGNRLSHF 186 (600)
Q Consensus 120 ~-~l~~L~~L~Ls--~----N~i~~l~~-----~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~-l~~L~~L~Ls~N~l~~l 186 (600)
. .+++|+.|+|+ + |.++..+. ..+..+++|+.|+|++ .+.......+.. +++|+.|+|++|.++..
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 1 34556666665 2 33332211 1133455566666644 333322222322 55556666655555432
Q ss_pred Ccccc-cccccccEEEccCCcC
Q psy1672 187 PVRSV-EPLLKLMMIELHDNPW 207 (600)
Q Consensus 187 ~~~~~-~~l~~L~~L~l~~N~~ 207 (600)
....+ ..+++|+.|++.+|++
T Consensus 472 ~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 472 GMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHhcCCCcCEEECcCCCC
Confidence 22222 3345555555555554
No 320
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.32 E-value=4.6e-06 Score=87.73 Aligned_cols=90 Identities=23% Similarity=0.418 Sum_probs=76.8
Q ss_pred CCCccccCCCCCCCEEEccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCccccc
Q psy1672 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192 (600)
Q Consensus 113 ~l~~~~f~~l~~L~~L~Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 192 (600)
.+....|.++..|+.+.+..+ +..+...+|.++.+|+.+.+. +.++.|...+|.++.+|+.++|..+ ++.+....|.
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~-~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDS-VVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTT-CCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EcccceeeecccccEEecccc-cceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 345567888899999999765 556778899999999999996 6788999999999999999999865 8889889999
Q ss_pred ccccccEEEccCC
Q psy1672 193 PLLKLMMIELHDN 205 (600)
Q Consensus 193 ~l~~L~~L~l~~N 205 (600)
.+.+|+.+.+..+
T Consensus 332 ~C~~L~~i~ip~s 344 (394)
T 4gt6_A 332 GCEQLERIAIPSS 344 (394)
T ss_dssp TCTTCCEEEECTT
T ss_pred CCCCCCEEEECcc
Confidence 9999999998654
No 321
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.32 E-value=2.1e-07 Score=87.61 Aligned_cols=82 Identities=22% Similarity=0.393 Sum_probs=60.0
Q ss_pred cccccccccceeeeEe-ecCCCCeeEEEEcCeeccCCcccCcc---ceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 263 YVEAVSSENATVVCRV-DSIPPAAISWYWNGRLLLNNTAFSSY---QRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v-~g~P~p~i~W~~~g~~l~~~~~~~~~---~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
...+..|+.+.|.|.+ .+.|.+.+.|+++++.+......... .+..+. ...+.|.|.+++.+|.|.|+|.|
T Consensus 116 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a 190 (209)
T 1nbq_A 116 PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLN-----PTTGELVFDPLSASDTGEYSCEA 190 (209)
T ss_dssp BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCC-----TTTCCEEESSCCGGGCCCEEEEE
T ss_pred ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEc-----CCcceEEEEeccccCCeEEEEEE
Confidence 3457789999999997 79999999999998877653321000 001010 02357999999999999999999
Q ss_pred ecCCCceeEEE
Q psy1672 339 ENRAGIADANF 349 (600)
Q Consensus 339 ~N~~G~~~~~v 349 (600)
.|..|....+.
T Consensus 191 ~n~~g~~~~s~ 201 (209)
T 1nbq_A 191 RNGYGTPMTSN 201 (209)
T ss_dssp ECSSSCCEECC
T ss_pred eCCcCcccccc
Confidence 99999984443
No 322
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.32 E-value=8.6e-07 Score=96.60 Aligned_cols=90 Identities=17% Similarity=0.242 Sum_probs=70.5
Q ss_pred cccccccccceeeeEeecCCCCe-eEEEEcCeeccCCcccCccceEEEe-eCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAA-ISWYWNGRLLLNNTAFSSYQRIFVI-EQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~-~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
...+..|+.+.|.|.+.|.|.|. +.|+++++.+..... +.... .++.....+.|.|.+++..|.|.|+|.|.|
T Consensus 322 ~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~-----~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 396 (524)
T 2ec8_A 322 TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWE-----DYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSN 396 (524)
T ss_dssp EEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBC-----CEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred eEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCcc-----ceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEe
Confidence 46678999999999999999999 999999987764331 11111 112223456899999999999999999999
Q ss_pred CCCceeEEEEEEEEEcc
Q psy1672 341 RAGIADANFTLQVTYRG 357 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~~~ 357 (600)
..|..+..+.|.|...+
T Consensus 397 ~~g~~~~~~~l~V~~~P 413 (524)
T 2ec8_A 397 SDVNAAIAFNVYVNTKP 413 (524)
T ss_dssp SSCEEEEEEEEEECEEE
T ss_pred cCceEEEEEEEEEecCC
Confidence 99999998888886543
No 323
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.31 E-value=6.1e-07 Score=82.63 Aligned_cols=75 Identities=13% Similarity=0.191 Sum_probs=57.9
Q ss_pred cccccccccceeeeEeecCCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
...+..|+.++|.|.+.+.+++ .+.|+++|+.+... ...+.|.|.+++.+|.|.|+|.|.|.
T Consensus 97 ~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~-----------------~~~~~L~i~~v~~~d~G~Y~C~a~n~ 159 (175)
T 1fnl_A 97 RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF-----------------HHNSDFHIPKATLKDSGSYFCRGLVG 159 (175)
T ss_dssp CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE-----------------EECCCEEESSCCGGGCEEEEEEEEET
T ss_pred CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC-----------------CCCCEEEEcccChhhCeEEEEEEEcC
Confidence 3557789999999999987664 99999998765311 11247999999999999999999997
Q ss_pred CCc-eeEEEEEEEE
Q psy1672 342 AGI-ADANFTLQVT 354 (600)
Q Consensus 342 ~G~-~~~~v~L~V~ 354 (600)
.|. .+..+.|.|.
T Consensus 160 ~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 160 SKNVSSETVNITIT 173 (175)
T ss_dssp TEEEECCCEEEEEE
T ss_pred CCCccCccEEEEEe
Confidence 654 4555666663
No 324
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.31 E-value=7.5e-07 Score=90.49 Aligned_cols=80 Identities=19% Similarity=0.298 Sum_probs=64.7
Q ss_pred ccccccccccceeeeEeecCCCCe-eEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEe-cCCCCCCeEEEEEEe
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAA-ISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT-NAQESDSGRFYCVAE 339 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~-~v~~~d~G~Y~C~a~ 339 (600)
....+..|+.+.|.|.+.|.|.|. +.|++++..+.... ...+ +.|.|. +++..|.|.|+|.|.
T Consensus 240 ~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~---------~~~~------~~L~i~~~v~~~d~G~Y~C~a~ 304 (331)
T 3u83_A 240 DGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV---------EAQN------RTLFFKGPINYSLAGTYICEAT 304 (331)
T ss_dssp CSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---------EEET------TEEEECSCCCGGGCEEEEEEEE
T ss_pred CCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc---------eecC------cEEEEeCCCccccCeEEEEEEE
Confidence 334577899999999999999998 99999887664321 1122 379999 899999999999999
Q ss_pred cCCCceeEEEEEEEEEc
Q psy1672 340 NRAGIADANFTLQVTYR 356 (600)
Q Consensus 340 N~~G~~~~~v~L~V~~~ 356 (600)
|..|..+..+.|.|...
T Consensus 305 N~~G~~~~~~~l~V~~~ 321 (331)
T 3u83_A 305 NPIGTRSGQVEVNITEA 321 (331)
T ss_dssp ETTEEEEEEEEECCBC-
T ss_pred eccccceEEEEEEEecc
Confidence 99999998888888544
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.29 E-value=3.2e-07 Score=101.65 Aligned_cols=126 Identities=18% Similarity=0.212 Sum_probs=69.3
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecc-cCccc-CccccCCCCCccEEEccCCCCCCCCcccc----CCCCC
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQI-DSGALDGLTNLIEIDLSDNLLTSIPSLTF----QSVRF 124 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n-~l~~i-~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f----~~l~~ 124 (600)
++.|+|++|.++......+. ..+++|+.|+|++| .++.. .+..+..+++|++|+|++|.++......+ ..+++
T Consensus 107 L~~L~L~~~~~~~~~~~~l~-~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 107 LEEIRLKRMVVTDDCLELIA-KSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp CCEEEEESCBCCHHHHHHHH-HHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCeEEeeCcEEcHHHHHHHH-HhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 77788877776533222221 03677888888777 44432 12223467778888888777655433222 24567
Q ss_pred CCEEEccCCCCCccCccc----ccCCCCcceeeCCCC-cCcccChhhhcCCCCCCEEEcC
Q psy1672 125 LRDLNLARNPISKIEKGA----FQFVPGLVKLDMSES-RLEHISPEAFTGAKSLESIKLN 179 (600)
Q Consensus 125 L~~L~Ls~N~i~~l~~~~----~~~l~~L~~L~Ls~n-~l~~i~~~~~~~l~~L~~L~Ls 179 (600)
|+.|+|++|. ..+.... +..+++|+.|++++| .+..+ +..+..+++|+.|++.
T Consensus 186 L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l-~~~~~~~~~L~~L~l~ 243 (594)
T 2p1m_B 186 LVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEKL-ATLLQRAPQLEELGTG 243 (594)
T ss_dssp CCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHH-HHHHHHCTTCSEEECS
T ss_pred CcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHH-HHHHhcCCcceEcccc
Confidence 8888887775 2222222 233577777777766 33332 3333444555555443
No 326
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.29 E-value=1.2e-06 Score=83.27 Aligned_cols=79 Identities=19% Similarity=0.408 Sum_probs=61.3
Q ss_pred cccccccccccccccccceeeeEeecCCCCe-eEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAA-ISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
|.+...+....+.+|+.++|.|.+.+.|.+. +.|+++++.+.... +.|.|.+++.+|+|.
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~-------------------~~L~i~~v~~~D~G~ 68 (204)
T 3sgj_C 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA-------------------SSYFIDAATVDDSGE 68 (204)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS-------------------SEEEESSCCGGGCEE
T ss_pred CeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc-------------------cEEEEecccccCCEE
Confidence 3444455557788999999999999988775 99999988765321 379999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|+|.|.|... +..+.|.|.
T Consensus 69 Y~C~a~n~~~--s~~~~l~V~ 87 (204)
T 3sgj_C 69 YRCQTQLSTL--SDPVQLEVH 87 (204)
T ss_dssp EEEEETTSBC--CCCEEEEEE
T ss_pred EEEEeCCCcc--cccEEEEEe
Confidence 9999998543 444556554
No 327
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.29 E-value=1.9e-06 Score=85.60 Aligned_cols=92 Identities=27% Similarity=0.451 Sum_probs=67.6
Q ss_pred ccccccccccccccccceeeeEeecCC-CCeeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIP-PAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P-~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.+...+....+..|+.++|.|.+.+.| .+.+.|++ +|..+.... .++.+...+ ...+.|.|.+++..|.|.
T Consensus 4 ~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~-----~~~~~~~~~--~~~~~L~i~~~~~~D~G~ 76 (291)
T 1qz1_A 4 QVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQ-----QRISVVWND--DDSSTLTIYNANIDDAGI 76 (291)
T ss_dssp CEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSC-----SSEEEEEEE--TTEEEEEECSCCGGGCEE
T ss_pred ceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCC-----ceEEEEEcC--CCeEEEEEecCCCCCCEE
Confidence 445556677889999999999999887 68999999 777665322 233332211 123589999999999999
Q ss_pred EEEEEecCCCc-eeEEEEEEEE
Q psy1672 334 FYCVAENRAGI-ADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~-~~~~v~L~V~ 354 (600)
|+|.|.|..|. .+..+.|.|.
T Consensus 77 Y~C~~~n~~g~~~~~~~~l~v~ 98 (291)
T 1qz1_A 77 YKCVVTAEDGTQSEATVNVKIF 98 (291)
T ss_dssp EEEEEECTTSCEEEEEEEEEEE
T ss_pred EEEEEEcCCCCeeEEEEEEEee
Confidence 99999999864 4566666664
No 328
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.28 E-value=6.5e-07 Score=85.79 Aligned_cols=84 Identities=19% Similarity=0.370 Sum_probs=57.8
Q ss_pred ccccccccccccccccc-eeeeEe-ecCCCCeeEEEEcCeeccCCcccCccceEEEe------eCCceeeeeeEEEecCC
Q psy1672 256 EIRMDSRYVEAVSSENA-TVVCRV-DSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI------EQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v-~L~C~v-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~------~~g~~~~~s~L~I~~v~ 327 (600)
.+...+....+..|+.+ .|.|.+ .+.|.|.+.|++++..+...... ..+..+. .++.+...+.|.|....
T Consensus 120 ~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~ 197 (231)
T 2pet_A 120 EVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEM--NPEGYMTSRTVREASGLLSLTSTLYLRLRK 197 (231)
T ss_dssp EEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSC--CSSEEEEEEEEECTTSCEEEEEEEEEECCG
T ss_pred EEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccccc--ccceeecceeEecCCCeEEEEEEEEEecch
Confidence 33334455667788887 999999 79999999999999887654311 1122221 22434445678887555
Q ss_pred CCCCeEEEEEEecC
Q psy1672 328 ESDSGRFYCVAENR 341 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~ 341 (600)
..|.|.|+|.|.|.
T Consensus 198 ~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 198 DDRDASFHCAAHYS 211 (231)
T ss_dssp GGGGCEEEEEEEEE
T ss_pred hhCCceEEEEEEcC
Confidence 66699999999994
No 329
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.28 E-value=6.5e-07 Score=83.62 Aligned_cols=62 Identities=16% Similarity=0.363 Sum_probs=51.5
Q ss_pred cccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCc
Q psy1672 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGI 344 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~ 344 (600)
.+..|+.+.|.|.+ |.|.|.|+++|+.+..... ..+.|.|.+++..|.|.|+|.|.|..|.
T Consensus 118 ~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~----------------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 118 GSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA----------------TKNTWNLGNNAKDPRGTYQCQGAKETSN 178 (186)
T ss_dssp CCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC----------------CSSCCEEEETTSCCEEEEEEEESSCEEE
T ss_pred ecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC----------------CcceEEECCCCcCcCEEEEEEEEcCcCC
Confidence 34589999999998 8899999999988753220 1237899999999999999999999887
Q ss_pred e
Q psy1672 345 A 345 (600)
Q Consensus 345 ~ 345 (600)
.
T Consensus 179 ~ 179 (186)
T 1jbj_A 179 P 179 (186)
T ss_dssp E
T ss_pred c
Confidence 5
No 330
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.28 E-value=2.1e-06 Score=94.76 Aligned_cols=95 Identities=20% Similarity=0.237 Sum_probs=67.3
Q ss_pred cccccccccccceeeeEee----cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 261 SRYVEAVSSENATVVCRVD----SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~----g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
+....+..|+.+.|.|.+. +.|.+.|.|+++|..+..........+...... ....+.|.|.+++.+|.|.|+|
T Consensus 449 ~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C 526 (585)
T 2ocw_A 449 PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDE--NSRLVSLTLNLVTRADEGWYWC 526 (585)
T ss_pred CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecC--cccEEEEEECCCCcccCeEEEE
Confidence 4556788899999999997 778889999999987654321111111111111 1123589999999999999999
Q ss_pred EEecCCCceeEE-EEEEEEEcc
Q psy1672 337 VAENRAGIADAN-FTLQVTYRG 357 (600)
Q Consensus 337 ~a~N~~G~~~~~-v~L~V~~~~ 357 (600)
.|.|..|..... +.|.|..++
T Consensus 527 ~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 527 GVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EeEeCCCccEEEEEEEEEEeee
Confidence 999999976544 788886654
No 331
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.28 E-value=1.2e-06 Score=95.97 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=65.2
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
.+.+..|+.+.|.|.+.|.|.|.|.|+++|+.+...... . . ....|.|.+++..|.|.|+|.|.|..
T Consensus 335 ~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~-------~-~-----~~~~L~I~~v~~~D~G~YtC~A~N~~ 401 (527)
T 3qs9_E 335 DYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG-------L-D-----NGYSISKFCNHKHQPGEYIFHAENDD 401 (527)
T ss_dssp EECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB-------C-S-----SSSEEEEECCCTTCCSCEEEEEEETT
T ss_pred cEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCccc-------c-c-----CCcEEEEecCCcccCEEEEEEEEeCC
Confidence 356778999999999999999999999999887543311 0 0 12368999999999999999999999
Q ss_pred CceeEEEEEEEEEc
Q psy1672 343 GIADANFTLQVTYR 356 (600)
Q Consensus 343 G~~~~~v~L~V~~~ 356 (600)
|.....+.|.|...
T Consensus 402 g~~~~~~~L~V~~~ 415 (527)
T 3qs9_E 402 AQFTKMFTLNIRRK 415 (527)
T ss_dssp EEEEEEEEEC--CC
T ss_pred CcEEEEEEEEEecC
Confidence 99998888888644
No 332
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.28 E-value=1.5e-06 Score=88.77 Aligned_cols=81 Identities=20% Similarity=0.258 Sum_probs=61.0
Q ss_pred cccccccccceeeeEeecCC-CCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 263 YVEAVSSENATVVCRVDSIP-PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P-~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
...+..|+.+.|.|.+.|.| .+.+.|++++..+.... .+.... + +.|.|.+++.+|.|.|+|.|.|.
T Consensus 137 ~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~-----~~~~~~-~------~~L~I~~v~~~D~G~Y~C~a~n~ 204 (329)
T 3oq3_B 137 ELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDG-----TKYSQS-G------QNLIIHNPELEDSGRYDCYVHYD 204 (329)
T ss_dssp ETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSS-----SSEEEE-T------TEEEECSCCGGGCEEEEEEEEEC
T ss_pred ceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCC-----ceEecC-C------CEEEEeecChhhCEEEEEEEEec
Confidence 34466799999999999999 89999999998774221 122222 2 37999999999999999999998
Q ss_pred --CCceeEE----EEEEEEE
Q psy1672 342 --AGIADAN----FTLQVTY 355 (600)
Q Consensus 342 --~G~~~~~----v~L~V~~ 355 (600)
.|..... +.|.|..
T Consensus 205 ~~~g~~~~~~s~~~~l~V~~ 224 (329)
T 3oq3_B 205 DVRIKNDIVVSRCKILTVIP 224 (329)
T ss_dssp CTTSSSCEEEEEEEEEEEEC
T ss_pred ccCCCceeEEEeeEEEEEEC
Confidence 7665444 5565543
No 333
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.28 E-value=7.5e-07 Score=87.83 Aligned_cols=72 Identities=17% Similarity=0.241 Sum_probs=58.1
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+. ..+ .+ ..++.+|.|.|+|.|.|
T Consensus 192 p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~--------------~~g------~~--~~v~~~d~G~Y~C~a~N 249 (265)
T 2oz4_A 192 PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL--------------PIG------ES--VTVTRDLEGTYLCRARS 249 (265)
T ss_dssp CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEEC--------------CTT------SC--EECCGGGCEEEEEEEEE
T ss_pred CCccEEcCCCeEEEEeECccCCCCeEEEEECCcccC--------------CCC------cE--EEeehhhCeEEEEEEEC
Confidence 345677889999999999999999999999886211 112 12 24778999999999999
Q ss_pred CCCceeEEEEEEEE
Q psy1672 341 RAGIADANFTLQVT 354 (600)
Q Consensus 341 ~~G~~~~~v~L~V~ 354 (600)
..|..+..+.|.|.
T Consensus 250 ~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 250 TQGEVTREVTVNVL 263 (265)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEe
Confidence 99999999998885
No 334
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.27 E-value=7.8e-07 Score=81.10 Aligned_cols=74 Identities=18% Similarity=0.304 Sum_probs=57.0
Q ss_pred cccccccccceeeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 263 YVEAVSSENATVVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
...+..|+.+.|.|.+. +.|.+.+.|+++++.+.... ..+.|.|.+++..|.|.|+|.|.|.
T Consensus 94 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~-----------------~~~~L~i~~v~~~d~G~Y~C~a~n~ 156 (170)
T 3ry4_A 94 HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH-----------------LDPTFSIPQANHSHSGDYHCTGNIG 156 (170)
T ss_dssp CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES-----------------SCCEEEESSCCGGGCEEEEEEEEET
T ss_pred CceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC-----------------CCCeEEEEeccccCCEEEEEEEEeC
Confidence 45567899999999995 56678999999887653211 1237999999999999999999999
Q ss_pred CCc-eeEEEEEEE
Q psy1672 342 AGI-ADANFTLQV 353 (600)
Q Consensus 342 ~G~-~~~~v~L~V 353 (600)
.|. .+..+.|.|
T Consensus 157 ~g~~~s~~~~l~V 169 (170)
T 3ry4_A 157 YTLFSSKPVTITV 169 (170)
T ss_dssp TEEEECCCEEEEE
T ss_pred cCccccccEEEEE
Confidence 986 344455554
No 335
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.27 E-value=1.4e-06 Score=90.99 Aligned_cols=83 Identities=24% Similarity=0.325 Sum_probs=64.6
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEe
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAE 339 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~ 339 (600)
+..+.+..|+.+.|.|.+.|.|.|.+.|++ ++..+.... .... ..+.|.|.+++.+|.|.|+|.|.
T Consensus 212 ~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~--------~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~ 278 (384)
T 3kld_A 212 PETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA--------RRHK-----SNGILEIPNFQQEDAGSYECVAE 278 (384)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTC--------EECT-----TSCEEEECSCCGGGCEEEEEEEE
T ss_pred CCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccc--------eecC-----CCcEEEECCCChhhCEEEEEEEE
Confidence 345567889999999999999999999999 444443211 1111 12479999999999999999999
Q ss_pred cCCCceeEEEEEEEEEc
Q psy1672 340 NRAGIADANFTLQVTYR 356 (600)
Q Consensus 340 N~~G~~~~~v~L~V~~~ 356 (600)
|..|.......|.|...
T Consensus 279 N~~G~~~~~~~l~v~~~ 295 (384)
T 3kld_A 279 NSRGKNVAKGQLTFYAQ 295 (384)
T ss_dssp ETTEEEEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEecC
Confidence 99999988888888654
No 336
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.27 E-value=9.3e-07 Score=81.39 Aligned_cols=79 Identities=25% Similarity=0.466 Sum_probs=59.7
Q ss_pred cccccccccccccccccceeeeEeecCCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
|.+...+..+.+.+|+.++|.|.+.+.+.+ .+.|++++..+... .+.|.|.+++..|.|.
T Consensus 5 P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~-------------------~~~L~i~~v~~~d~G~ 65 (176)
T 1f2q_A 5 PKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET-------------------NSSLNIVNAKFEDSGE 65 (176)
T ss_dssp CCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC-------------------SSEEEECSCCGGGCEE
T ss_pred CEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC-------------------ceEEEEeccceecCEE
Confidence 455555666788999999999999988875 69999998766431 1379999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|+|.+.|..+... +.+.|.
T Consensus 66 Y~C~~~~~~~s~~--~~l~V~ 84 (176)
T 1f2q_A 66 YKCQHQQVNESEP--VYLEVF 84 (176)
T ss_dssp EEEECTTSSCCCC--EEEEEE
T ss_pred EEEEcCCcccccc--EEEEEe
Confidence 9999999776544 444443
No 337
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.27 E-value=1.9e-06 Score=82.21 Aligned_cols=81 Identities=19% Similarity=0.203 Sum_probs=63.0
Q ss_pred ccccccccccceeeeEeecCCCC--eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEe
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPA--AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAE 339 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~ 339 (600)
..+.+..|++++|.|.+ +.|.| .|+|.+....+ .+.... . ....|.|.+++.+|.|.|.|.|.
T Consensus 15 ~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---------~~~~~~-~----~~~~L~I~~v~~~d~G~Y~C~a~ 79 (210)
T 1gsm_A 15 PVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---------GAVQSD-T----GRSVLTVRNASLSAAGTRVCVGS 79 (210)
T ss_dssp SEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---------CCEEEE-S----SEEEEEECSCCGGGCEEEEEEEE
T ss_pred CceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---------CcEEec-C----CccEEEECccCcccCceEEEEEE
Confidence 34688899999999999 88888 99999843222 122221 1 23579999999999999999999
Q ss_pred cCCCceeEEEEEEEEEcc
Q psy1672 340 NRAGIADANFTLQVTYRG 357 (600)
Q Consensus 340 N~~G~~~~~v~L~V~~~~ 357 (600)
|..|...+.+.|.|...|
T Consensus 80 n~~~~~~~~~~ltV~~~P 97 (210)
T 1gsm_A 80 CGGRTFQHTVQLLVYAFP 97 (210)
T ss_dssp ETTEEEEEEEEEEEEBCC
T ss_pred eCCCceEEEEEEEEEecC
Confidence 999988888888886543
No 338
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.26 E-value=1.8e-06 Score=82.22 Aligned_cols=85 Identities=15% Similarity=0.242 Sum_probs=57.7
Q ss_pred cccccccceeeeEeecCCCCeeEEEEc-CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 265 EAVSSENATVVCRVDSIPPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~P~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
.+..|+.++|.|.+.|.|.|.|.|+++ +..+..... .......++.+...+.+. +...|.|.|+|.|.|..|
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~l~---v~~~d~g~Y~C~a~n~~g 199 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTT----TTNSKREEKLFNVTSTLR---INTTTNEIFYCTFRRLDP 199 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEE----EEECC----CEEEEEEEE---EECCTTCEEEEEEEETTT
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCccc----eEEEcCCCCCEEEEEEEE---EeccCCcEEEEEEEeCcc
Confidence 456799999999999999999999997 655543210 001111122222223333 346889999999999999
Q ss_pred ceeEEEEEEEEEc
Q psy1672 344 IADANFTLQVTYR 356 (600)
Q Consensus 344 ~~~~~v~L~V~~~ 356 (600)
.....+.|.|...
T Consensus 200 ~~~~~~~l~v~~~ 212 (222)
T 3sbw_C 200 EENHTAELVIPEL 212 (222)
T ss_dssp TEEEEEEEECCCC
T ss_pred ceeeEEEEEecCC
Confidence 9999988887543
No 339
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.26 E-value=1.1e-07 Score=108.49 Aligned_cols=94 Identities=19% Similarity=0.357 Sum_probs=0.0
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+........+..|+.+.|.|.+.|.|.|.|.|+++|..+.... ++.+..+ .+.|.|.+++.+|.|.
T Consensus 666 ~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~------~~~~~~~-----~~~L~I~~v~~~D~G~ 734 (772)
T 3v2a_R 666 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS------GIVLKDG-----NRNLTIRRVRKEDEGL 734 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCC------CeEEcCC-----CcEEEECcCCHHHCEE
Confidence 3444444555678889999999999999999999999998776432 1222111 2479999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEccC
Q psy1672 334 FYCVAENRAGIADANFTLQVTYRGV 358 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~~~ 358 (600)
|+|.|.|..|.++..+.|.|...+.
T Consensus 735 Y~C~a~N~~G~~~~~~~l~V~~~p~ 759 (772)
T 3v2a_R 735 YTCQACSVLGCAKVEAFFIIEGAQE 759 (772)
T ss_dssp -------------------------
T ss_pred EEEEEEeCCcceeEEEEEEEECCCC
Confidence 9999999999999999999876543
No 340
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.26 E-value=7.6e-07 Score=83.76 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=59.5
Q ss_pred cccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCc
Q psy1672 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGI 344 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~ 344 (600)
.+..|+.+.|.|.+.|.|.|.+.|++++..+.. ......++. ...+.+.+++..|.|.|+|.|.|..|.
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--------~~~~~~~~~---~~~~~i~~v~~~d~G~Y~C~a~N~~g~ 182 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--------SHIRTPEGL---YQVTSVLRLKPQPSRNFSCMFWNAHMK 182 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--------EEEECTTSC---EEEEEEEEECCCTTCCEEEEEEETTTT
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCCccC--------ceeeCCCCC---EEEEEEEEEEcCCCCEEEEEEEcCCcc
Confidence 456799999999999999999999987654321 111112221 235667788899999999999999999
Q ss_pred eeEEEEEEEEE
Q psy1672 345 ADANFTLQVTY 355 (600)
Q Consensus 345 ~~~~v~L~V~~ 355 (600)
....+.+.|..
T Consensus 183 ~~~~~~l~v~~ 193 (202)
T 3bp6_B 183 ELTSAIIDPLS 193 (202)
T ss_dssp EEEEEEECC--
T ss_pred cccEEEEEecC
Confidence 99888887743
No 341
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.26 E-value=1.5e-06 Score=73.10 Aligned_cols=92 Identities=15% Similarity=0.217 Sum_probs=59.5
Q ss_pred cccccccccceeeeEeecCCC---CeeEEEEcCeec-------c--CCcc--cCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPP---AAISWYWNGRLL-------L--NNTA--FSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~---p~i~W~~~g~~l-------~--~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
.+.+..|+.++|.|.+.+.+. ..+.|++..... . .... .....++.+..+ .......|.|.+++.
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~-~~~~~~sL~I~~v~~ 81 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGD-LNKGDVSLIIKNVTL 81 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSC-GGGTBCCEEECSCCG
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccC-ccCCcEeEEEccCCC
Confidence 356788999999999886543 348999954210 0 0000 001122222211 111235799999999
Q ss_pred CCCeEEEEEEecCCCceeEEEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
+|+|.|+|.+.+..+.....+.|.|.+
T Consensus 82 ~D~G~Y~C~v~~~~~~~~~~~~l~V~V 108 (109)
T 2oyp_A 82 DDHGTYCCRIQFPGLMNDKKLELKLDI 108 (109)
T ss_dssp GGCEEEEEEECCSSTTCCEEEEEEEEE
T ss_pred hhCeEEEEEEEcCCcccceEEEEEEEe
Confidence 999999999999887777777777754
No 342
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.25 E-value=1.5e-06 Score=76.73 Aligned_cols=92 Identities=20% Similarity=0.338 Sum_probs=61.6
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEc--CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWN--GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.+...+..+.+.+|+.++|.|.+.+. +.+.|+++ ++.+.... ....++.+..++ ....|.|.+++.+|+|.
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~--~~~~r~~~~~~~---~~~~L~I~~~~~~DsG~ 91 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELV--SEEGRIVQTQNG---SVYTLTIQNIQYEDNGI 91 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECC--CTTTTEEEEEET---TEEEEEECSCCGGGCEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEE--EeCCCEEEEcCC---CEEEEEECCCChHHCEE
Confidence 44555677889999999999999976 88999996 32211000 012344443333 23579999999999999
Q ss_pred EEEEEecCCCc----eeEEEEEEEE
Q psy1672 334 FYCVAENRAGI----ADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~----~~~~v~L~V~ 354 (600)
|+|.|.|..|. ......|.|.
T Consensus 92 Y~C~a~n~~g~~~~~~g~gt~L~V~ 116 (133)
T 3khq_A 92 YFCKQKCDSANHNVTDSCGTELLVL 116 (133)
T ss_dssp EEEEESSCC-------CCCEEEEEC
T ss_pred EEEEEEeCCCCcceeECCCEEEEEE
Confidence 99999998763 2233556663
No 343
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.25 E-value=2.4e-06 Score=74.21 Aligned_cols=96 Identities=20% Similarity=0.203 Sum_probs=60.9
Q ss_pred ccccccccccccceeeeEeecCCC---CeeEEEEcCeeccC-------Cc---c-cC-ccceEEEeeCCceeeeeeEEEe
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPP---AAISWYWNGRLLLN-------NT---A-FS-SYQRIFVIEQGEYERKSSLVLT 324 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~---p~i~W~~~g~~l~~-------~~---~-~~-~~~~~~~~~~g~~~~~s~L~I~ 324 (600)
.+..+.+..|++++|.|.+.+.+. ..|.|++....-.. .. . .+ ...|+.+..........+|.|.
T Consensus 6 ~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~ 85 (123)
T 4gjt_B 6 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 85 (123)
T ss_dssp CCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEE
T ss_pred cCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEEC
Confidence 345678899999999999976554 35789984321000 00 0 00 0123333222212234579999
Q ss_pred cCCCCCCeEEEEEEec-CCCceeEEEEEEEEE
Q psy1672 325 NAQESDSGRFYCVAEN-RAGIADANFTLQVTY 355 (600)
Q Consensus 325 ~v~~~d~G~Y~C~a~N-~~G~~~~~v~L~V~~ 355 (600)
+++.+|+|.|+|.+.+ ..|...+.+.|.|.+
T Consensus 86 ~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE 117 (123)
T 4gjt_B 86 NAVQADEGEYECRVSTFPAGSFQARLRLRVLE 117 (123)
T ss_dssp SCCSSSCSEEEEEEEESSSCEEEEEEEEEC--
T ss_pred CCChHHCEEEEEEEEECCCCeEEeEEEEEEEE
Confidence 9999999999998876 567778888888754
No 344
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.25 E-value=8.6e-07 Score=84.05 Aligned_cols=92 Identities=17% Similarity=0.365 Sum_probs=64.4
Q ss_pred ccccccccccccccccccceeeeEeecC-CC-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSI-PP-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
.|.+...+....+..|+.++|.|.+.+. |+ +.|.|+++|+.+....... .... .++.+...+.|.|..++..|.
T Consensus 114 ~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~---~~~~-~~~~~~~~s~L~i~~~~~~d~ 189 (213)
T 3mj8_L 114 APSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTT---QPSK-SDSKYMATSYLTMTADAWKSR 189 (213)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEC---CCEE-ETTEEEEEEEEEEESHHHHSC
T ss_pred CCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccC---CcCc-cCCcEEEEEEEEEeHHHcCCC
Confidence 3444433444445589999999999985 33 4999999998876432110 1111 445455567899999999999
Q ss_pred eEEEEEEecCCCceeEEE
Q psy1672 332 GRFYCVAENRAGIADANF 349 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v 349 (600)
|.|+|.|+|..+...+.+
T Consensus 190 G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 190 NTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp SCEEEEEEETTEEEEEEE
T ss_pred CEEEEEEEECCccEEeee
Confidence 999999999987766554
No 345
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.25 E-value=2.3e-06 Score=85.02 Aligned_cols=92 Identities=26% Similarity=0.474 Sum_probs=69.8
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...+..+.+..|+.++|.|.+.+.|. .+.|++ +|..+... .+..+..++ ..+.|.|.+++..|.|
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~------~~~~~~~~~---~~~~L~i~~~~~~D~G 73 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST------QRVVVQKEG---VRSRLTIYNANIEDAG 73 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCB------TTEEEEEET---TEEEEEECSCCGGGCE
T ss_pred CceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCC------CcEEEecCC---CEEEEEEccCCcccCE
Confidence 456666677788999999999999998875 899999 66655432 233343333 2358999999999999
Q ss_pred EEEEEEecCCCce-eEEEEEEEEE
Q psy1672 333 RFYCVAENRAGIA-DANFTLQVTY 355 (600)
Q Consensus 333 ~Y~C~a~N~~G~~-~~~v~L~V~~ 355 (600)
.|+|.|.|..|.. ...+.+.|..
T Consensus 74 ~Y~C~~~n~~g~~~~~~~~l~v~~ 97 (291)
T 2wim_A 74 IYRCQATDAKGQTQEATVVLEIYQ 97 (291)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEC
T ss_pred EEEEEEecccCceEEEEEEEEecC
Confidence 9999999999876 4566666644
No 346
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.24 E-value=2e-06 Score=89.72 Aligned_cols=83 Identities=23% Similarity=0.440 Sum_probs=66.9
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
...+..|+.+.|.|.+.|.|.+.+.|+++++.+.... . ..... .+.|.|.+++..|.|.|+|.|.|..
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~------~-~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~ 298 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDK------A-KFENF-----NKALRITNVSEEDSGEYFCLASNKM 298 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTT------E-EEEGG-----GTEEEESSCCGGGCEEEEEEEECSS
T ss_pred CceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCc------c-ccccc-----CceEEEccCCHhHCEEEEEEEEeCC
Confidence 3457789999999999999999999999988765432 1 11111 2479999999999999999999999
Q ss_pred CceeEEEEEEEEEcc
Q psy1672 343 GIADANFTLQVTYRG 357 (600)
Q Consensus 343 G~~~~~v~L~V~~~~ 357 (600)
|..+..+.|.|...+
T Consensus 299 g~~~~~~~l~V~~~p 313 (404)
T 3p3y_A 299 GSIRHTISVRVKAAP 313 (404)
T ss_dssp CEEEEEEEEEEEEEE
T ss_pred CcEEEEEEEEEeCCC
Confidence 999888888886543
No 347
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.24 E-value=2.5e-06 Score=73.40 Aligned_cols=91 Identities=18% Similarity=0.288 Sum_probs=62.3
Q ss_pred cccccccccccceeeeEeec--CCCCeeEEEEcCeeccCCc-c----c--CccceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 261 SRYVEAVSSENATVVCRVDS--IPPAAISWYWNGRLLLNNT-A----F--SSYQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g--~P~p~i~W~~~g~~l~~~~-~----~--~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
+..+.+..|+.++|.|.+.+ .+...+.|++++..+.... . . ....|+.+.. ...|+|.+++.+|+
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~------~~sL~I~~v~~~D~ 83 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGP------GLGLTLQSLTVNDT 83 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECS------TTCEEECSCCGGGC
T ss_pred cCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCC------ceEEEEeeCChhhC
Confidence 45678889999999999986 3345799999754321100 0 0 0012333211 34799999999999
Q ss_pred eEEEEEEe-cCCCceeEEEEEEEEEcc
Q psy1672 332 GRFYCVAE-NRAGIADANFTLQVTYRG 357 (600)
Q Consensus 332 G~Y~C~a~-N~~G~~~~~v~L~V~~~~ 357 (600)
|.|+|.+. +..|..++.+.|.|...+
T Consensus 84 G~Y~C~v~~~~~g~~~~~~~L~V~~pp 110 (117)
T 3q0h_A 84 GEYFCIYHTYPDGTYTGRIFLEVLESS 110 (117)
T ss_dssp EEEEEEEEEETTCCEEEEEEEEEECC-
T ss_pred EEEEEEEEECCCCCeEEEEEEEEEccC
Confidence 99999975 466888888899886544
No 348
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.24 E-value=2.4e-06 Score=89.18 Aligned_cols=85 Identities=22% Similarity=0.452 Sum_probs=68.4
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+....+..|+.++|.|.+.+.|.+.+.|++++..+.... .+.....+ +.|.|.+++..|.|.|+|.|.|
T Consensus 228 ~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~-----~~~~~~~~------~~L~i~~~~~~d~G~Y~C~a~n 296 (403)
T 3laf_A 228 PSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRS-----KKYSLLGG------SNLLISNVTDDDSGTYTCVVTY 296 (403)
T ss_dssp CCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSS-----SSEEEETT------TEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCC-----ceEEECCc------cEEEEeCCCHHHCEEEEEEEEc
Confidence 445667789999999999999999999999988765322 12222222 3799999999999999999999
Q ss_pred CCCceeEEEEEEEEEc
Q psy1672 341 RAGIADANFTLQVTYR 356 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~~ 356 (600)
..|..+..+.|.|...
T Consensus 297 ~~g~~~~~~~l~V~~~ 312 (403)
T 3laf_A 297 KNENISASAELTVLVP 312 (403)
T ss_dssp TTEEEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEEECC
Confidence 9999988888888654
No 349
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.23 E-value=1.5e-06 Score=81.56 Aligned_cols=94 Identities=12% Similarity=0.279 Sum_probs=65.1
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcc------cCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTA------FSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~------~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
..+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .....++... .+.|.|.+++.
T Consensus 5 ~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-------~~~L~i~~~~~ 77 (209)
T 1nbq_A 5 VTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-------PTGITFKSVTR 77 (209)
T ss_dssp CEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-------TTEEECSCCCT
T ss_pred EEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-------ccEEEEeeCCH
Confidence 3445556778889999999999999999999999997654211000 0001111111 25799999999
Q ss_pred CCCeEEEEEEecCCCc--eeEEEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGI--ADANFTLQVTY 355 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~--~~~~v~L~V~~ 355 (600)
.|.|.|+|.|.|..|. .+..+.|.|..
T Consensus 78 ~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~ 106 (209)
T 1nbq_A 78 EDTGTYTCMVSEEGGNSYGEVKVKLIVLV 106 (209)
T ss_dssp TSCSEEEEEEEETTSSCEECCEEECCEEB
T ss_pred HHCcEEEEEEecCCCCccceEEEEEEEec
Confidence 9999999999998763 34455666644
No 350
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.23 E-value=4.2e-07 Score=92.94 Aligned_cols=99 Identities=19% Similarity=0.245 Sum_probs=71.5
Q ss_pred cccccccccccccccccceeeeEe---ecCC-CCeeEEEEcCeeccCCcc---cCccceEEEeeCCceeeeeeEEEecCC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRV---DSIP-PAAISWYWNGRLLLNNTA---FSSYQRIFVIEQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v---~g~P-~p~i~W~~~g~~l~~~~~---~~~~~~~~~~~~g~~~~~s~L~I~~v~ 327 (600)
|.+...+....+..|+.+.|.|.+ .|.| .+.+.|++++..+..... .....+..+..++.....+.|.|.+++
T Consensus 227 P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~ 306 (339)
T 3o4o_C 227 PVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVT 306 (339)
T ss_dssp CEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSC
T ss_pred CEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEec
Confidence 444444566678899999999999 8999 889999999887653211 112223333334433344579999999
Q ss_pred CCCC-eEEEEEEecCCCceeEEEEEEE
Q psy1672 328 ESDS-GRFYCVAENRAGIADANFTLQV 353 (600)
Q Consensus 328 ~~d~-G~Y~C~a~N~~G~~~~~v~L~V 353 (600)
..|. |.|+|.|.|..|.+++.+.+.+
T Consensus 307 ~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 307 REDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp CCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred hhhcCccEEEEEEeccCceEEEEEhhH
Confidence 9997 9999999999999887655544
No 351
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.23 E-value=8.4e-07 Score=90.35 Aligned_cols=85 Identities=28% Similarity=0.487 Sum_probs=66.3
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
..+..|+.+.|.|.+.|.|.+.+.|+++++.+....... .... .. ....|.|.+++..|.|.|+|.|.|..|
T Consensus 133 ~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~---~~~~-~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g 204 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIG---GIKL-RH----QQWSLVMESVVPSDRGNYTCVVENKFG 204 (334)
T ss_dssp EEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTT---CCCC-CT----TTTEEEECSCCGGGCCCEEEEEEETTE
T ss_pred EEecCCCcEEEEEEccCCCCCeEEEEECCEECccccccc---ceec-cc----ceEEEEECCCCcccCEEEEEEEEeCCC
Confidence 456789999999999999999999999988775443211 0000 01 124799999999999999999999999
Q ss_pred ceeEEEEEEEEEc
Q psy1672 344 IADANFTLQVTYR 356 (600)
Q Consensus 344 ~~~~~v~L~V~~~ 356 (600)
.....+.|.|...
T Consensus 205 ~~~~~~~l~V~~~ 217 (334)
T 1ry7_B 205 SIRQTYTLDVLER 217 (334)
T ss_dssp EEEEEEEEEEECC
T ss_pred CEEEEEEEEEecC
Confidence 9888888888653
No 352
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.23 E-value=1.4e-06 Score=81.07 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=58.0
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|++++... .. ..+.|.|.+++..|.|.|
T Consensus 9 P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-------------~~------~~~~L~i~~v~~~D~G~Y 67 (184)
T 2gi7_A 9 PSLQALPS-SLVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-------------YQ------DQAVLFIPAMKRSLAGRY 67 (184)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECST-TCSEEEEEETTTCC-------------EE------SSSEEEESSCCGGGCEEE
T ss_pred CeEEeCCC-ccccCCCcEEEEEeCCC-CCCEEEEEECCccc-------------cC------cccEEEECcCChhhCceE
Confidence 34443344 36789999999999988 78899999987540 01 123799999999999999
Q ss_pred EEEEecCCCce--eEEEEEEE
Q psy1672 335 YCVAENRAGIA--DANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~--~~~v~L~V 353 (600)
+|.|.|..|.. +..+.|.|
T Consensus 68 ~C~a~n~~g~~~~s~~~~l~V 88 (184)
T 2gi7_A 68 RCSYQNGSLWSLPSDQLELVA 88 (184)
T ss_dssp EEEEEETTEEBCCCCCEEEEE
T ss_pred EEEEEcCCCccCCCCCEEEEe
Confidence 99999988632 34455655
No 353
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.23 E-value=3.7e-06 Score=88.42 Aligned_cols=140 Identities=21% Similarity=0.311 Sum_probs=115.8
Q ss_pred CceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCccccCCCCCCCEEE
Q psy1672 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLN 129 (600)
Q Consensus 50 ~l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 129 (600)
.++.+.+..+ +..+....|. .+..|+.+.+..+. +...+|.++.+|+.+.+..+ ++.|...+|.++.+|+.++
T Consensus 254 ~l~~~~~~~~-~~~i~~~~F~--~~~~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~ 326 (394)
T 4fs7_A 254 DLESISIQNN-KLRIGGSLFY--NCSGLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSID 326 (394)
T ss_dssp SCCEEEECCT-TCEECSCTTT--TCTTCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEEC
T ss_pred cceeEEcCCC-cceeeccccc--cccccceeccCcee---eccccccccccccccccccc-cceechhhhcCCCCCCEEE
Confidence 3677777655 5567777787 78999999887653 56677999999999999765 8999999999999999999
Q ss_pred ccCCCCCccCcccccCCCCcceeeCCCCcCcccChhhhcCCCCCCEEEcCCCcCCCCCcccccccccccEE
Q psy1672 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMI 200 (600)
Q Consensus 130 Ls~N~i~~l~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 200 (600)
|..+ ++.+...+|.++.+|+.+.|..+ ++.|...+|.++.+|+.++|..+ +..+. ..|..+.+|+.+
T Consensus 327 lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~~~~-~~F~~c~~L~~I 393 (394)
T 4fs7_A 327 LPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LEQYR-YDFEDTTKFKWI 393 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GGGGG-GGBCTTCEEEEE
T ss_pred eCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CEEhh-heecCCCCCcEE
Confidence 9754 88999999999999999999877 99999999999999999999755 55553 467777777654
No 354
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.23 E-value=2.8e-06 Score=80.85 Aligned_cols=95 Identities=16% Similarity=0.238 Sum_probs=63.1
Q ss_pred ccccccccccccceeeeEeecCCC-----CeeEEEEcCeeccC---------CcccCccceEEEeeCCceeeeeeEEEec
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPP-----AAISWYWNGRLLLN---------NTAFSSYQRIFVIEQGEYERKSSLVLTN 325 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~-----p~i~W~~~g~~l~~---------~~~~~~~~~~~~~~~g~~~~~s~L~I~~ 325 (600)
.+..+.+..|+.+.|.|.+.+.|. ..+.|++++..+.. ........+..+..++.......|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 345567889999999999987663 48999997533211 0000011233333221111235899999
Q ss_pred CCCCCCeEEEEEEecCCCceeEEEEEEEEE
Q psy1672 326 AQESDSGRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 326 v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
++.+|.|.|+|.|.| .|.....+.|.|..
T Consensus 87 v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~ 115 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGADYKRITVKVNA 115 (222)
T ss_dssp CCGGGCEEEEEEEES-SSEEEEEEEEEEEB
T ss_pred cccccCeEEEEEEEe-CCCceeEEEEEEEC
Confidence 999999999999999 67777777887753
No 355
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.22 E-value=2.8e-06 Score=86.62 Aligned_cols=90 Identities=16% Similarity=0.166 Sum_probs=66.5
Q ss_pred ccccccccccccceeeeEeecCC---CC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe-EE
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIP---PA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG-RF 334 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P---~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G-~Y 334 (600)
.+....+..|+.+.|.|.+.|.| .+ .+.|++++..+..... .........+. ...+.|.|.+++.+|.| .|
T Consensus 234 ~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~---~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~~Y 309 (329)
T 3oq3_B 234 LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDF---GVYSILTSSGG-ITEATLYFENVTEEYIGNTY 309 (329)
T ss_dssp CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCS---SEEEEEEEETT-EEEEEEEESSCCGGGTTCEE
T ss_pred cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCC---ceeeeecccCc-eeEeEEEEEeccHHHCCCcE
Confidence 44557788999999999999988 77 8899999876422110 00011011222 24578999999999999 99
Q ss_pred EEEEecCCCceeEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQV 353 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V 353 (600)
+|.|.|..|.....+.|.|
T Consensus 310 ~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 310 TCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEEECSSCEEEEEEEEEE
T ss_pred EEEEEecCCceEEEEEEEe
Confidence 9999999999988887765
No 356
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.22 E-value=3.9e-06 Score=91.37 Aligned_cols=99 Identities=23% Similarity=0.364 Sum_probs=73.3
Q ss_pred ccccccccccccccccccceeeeEeecCCCCe-eEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAA-ISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...+....+..|+.+.|.|.+.+.|.+. +.|++++..+... ...+..+..+......+.|.|.+++..|.|
T Consensus 211 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~----~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 286 (524)
T 2ec8_A 211 VPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ----EKYNSWHHGDFNYERQATLTISSARVNDSG 286 (524)
T ss_dssp CCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCC----EEEEEEECSSSCEEEEEEEEESSCCTTTCE
T ss_pred CCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccc----cccccccccCCccceEEEEEECCCCHHHCE
Confidence 45555555566788999999999999999886 9999988763111 111222222222344578999999999999
Q ss_pred EEEEEEecCCCceeEEEEEEEEEc
Q psy1672 333 RFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
.|+|.|.|..|.....+.|.|...
T Consensus 287 ~Y~C~a~n~~g~~~~~~~l~V~~~ 310 (524)
T 2ec8_A 287 VFMCYANNTFGSANVTTTLEVVDK 310 (524)
T ss_dssp EEEEEEECSSCEEEEEEEEEEESS
T ss_pred EEEEEEEecCCceEEEEEEEEecc
Confidence 999999999999988888888643
No 357
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.22 E-value=4e-06 Score=89.15 Aligned_cols=88 Identities=10% Similarity=0.152 Sum_probs=63.3
Q ss_pred ccccccccccceeeeEeec-CCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 262 RYVEAVSSENATVVCRVDS-IPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g-~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
....+.+|+.+.|.|.+.| .|.+.|.|++++..+.....+ .......+......+.|.|.+++..|.|.|+|.|.|
T Consensus 235 ~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~---~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N 311 (423)
T 3qs7_E 235 PQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYF---EMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSK 311 (423)
T ss_dssp TEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEE---EEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETT
T ss_pred CceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEcccccee---ecccccCCceeEEEEEEEEeecCHHHCEEEEEEEec
Confidence 3556788999999999998 677999999998876433211 001111111123345799999999999999999999
Q ss_pred CCCceeEEEEEEEEE
Q psy1672 341 RAGIADANFTLQVTY 355 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~ 355 (600)
. .+..+.|.|..
T Consensus 312 ~---~~~~~~L~V~~ 323 (423)
T 3qs7_E 312 H---PSQSALVTIVE 323 (423)
T ss_dssp E---EEEEEEEEEES
T ss_pred C---CCceEEEEEEe
Confidence 8 66777777754
No 358
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.21 E-value=2.6e-06 Score=72.60 Aligned_cols=84 Identities=20% Similarity=0.387 Sum_probs=56.0
Q ss_pred cccccccccccccceeeeEeecCCCCeeEEEEcC--eecc----CCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RLLL----NNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~l~----~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
..+..+.+.+|+.++|.|.+.+.+ +.+.|++.. ..+. .........++.+..+........|.|.+++.+|+|
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG 84 (113)
T 1h5b_A 6 QSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSG 84 (113)
T ss_dssp EECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCE
T ss_pred ECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCE
Confidence 345667889999999999998754 689999843 2110 000001123343333221223458999999999999
Q ss_pred EEEEEEecCCC
Q psy1672 333 RFYCVAENRAG 343 (600)
Q Consensus 333 ~Y~C~a~N~~G 343 (600)
.|.|.+.|..|
T Consensus 85 ~Y~C~~~n~~~ 95 (113)
T 1h5b_A 85 TYFCAAEASSG 95 (113)
T ss_dssp EEEEEEECSSS
T ss_pred EEEEEEecCCC
Confidence 99999999876
No 359
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.21 E-value=2.4e-06 Score=83.35 Aligned_cols=79 Identities=23% Similarity=0.445 Sum_probs=63.2
Q ss_pred cccccccccccccccccceeeeEeecCCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|+++|..+... ...|.|.+++..|.|.
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~-------------------~~~l~i~~~~~~d~G~ 62 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-------------------TPSYRITSASVNDSGE 62 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC-------------------SSEEEESSCCGGGCEE
T ss_pred CeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc-------------------CCeEEEecCCcccCeE
Confidence 455566677788999999999999999888 99999998876432 1368999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEE
Q psy1672 334 FYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|+|.|.|..+... +.+.|.
T Consensus 63 Y~C~~~~~~~s~~--~~l~v~ 81 (262)
T 3rjd_A 63 YRCQRGLSGRSDP--IQLEIH 81 (262)
T ss_dssp EEEEESSSCCCCC--EEEEEE
T ss_pred EEEEEecCCcccc--EEEEEe
Confidence 9999999877654 444443
No 360
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.21 E-value=1.2e-06 Score=73.98 Aligned_cols=74 Identities=14% Similarity=0.336 Sum_probs=52.7
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+.. .+..|++|+|.|.+.+. ...+.|+++++.+... + .... .....|.|.+++.+|+|.|
T Consensus 6 P~i~~~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~-------~--~~~~---~~~~~l~I~~v~~~dsG~Y 71 (105)
T 2vsd_A 6 PSLSLHPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFDK-------E--KDKE---QDAAEFSFAVTNLEDAGTY 71 (105)
T ss_dssp CEEEEESCS-SCCTTCEEEEEEECCSS-CEEEEEEETTEEEEEE-------E--ECTT---CSEEEEEEECCSGGGCEEE
T ss_pred CEEEeCCCC-CcCcCCCEEEEEEcCCC-CcEEEEEECCccceee-------e--ccCC---CCEEEEEECCCCHHHCeEE
Confidence 444444444 67899999999999865 4678999988654311 0 0011 1235799999999999999
Q ss_pred EEEEecCC
Q psy1672 335 YCVAENRA 342 (600)
Q Consensus 335 ~C~a~N~~ 342 (600)
+|.+.|..
T Consensus 72 ~C~~~n~~ 79 (105)
T 2vsd_A 72 QCRYQVSE 79 (105)
T ss_dssp EEEEEEET
T ss_pred EEEEEcCC
Confidence 99999964
No 361
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.21 E-value=7.8e-07 Score=84.55 Aligned_cols=74 Identities=18% Similarity=0.313 Sum_probs=55.4
Q ss_pred ccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecC-CCCCCeEEEEEEecCCCce-
Q psy1672 268 SSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA-QESDSGRFYCVAENRAGIA- 345 (600)
Q Consensus 268 ~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v-~~~d~G~Y~C~a~N~~G~~- 345 (600)
+|+.++|.|. +.|.|.|.|+++++.+..... ...+ ...+ +.|.|.++ +..|+|.|+|.|.|..|..
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~---~~~~-~~~~------~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~ 194 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQHNDKNIGGDED---DKNI-GSDE------DHLSLKEFSELEQSGYYVCYPRGSKPEDA 194 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEETTEEESCCTT---CTTE-EEET------TEEEETTCCHHHHCEEEEEEETTSCGGGS
T ss_pred cCCcEEEEcC--CCCCCceEEEECCEECCCccC---CceE-ecCC------CEEEEeeCCccccCEEEEEEeccCCCCce
Confidence 8999999999 789999999999987754321 0111 1122 47999999 9999999999999999963
Q ss_pred eEEEEEEE
Q psy1672 346 DANFTLQV 353 (600)
Q Consensus 346 ~~~v~L~V 353 (600)
+..+.|.+
T Consensus 195 s~~l~l~~ 202 (204)
T 1sy6_A 195 NFYLYLRA 202 (204)
T ss_dssp SCEEEEEE
T ss_pred eEEEEEEE
Confidence 45555543
No 362
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.21 E-value=1.6e-06 Score=82.10 Aligned_cols=82 Identities=18% Similarity=0.335 Sum_probs=58.2
Q ss_pred cccccccceeeeEeecCCCC--eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 265 EAVSSENATVVCRVDSIPPA--AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
.+..|+.++|.|.+.|.+++ .|.|+++|+.+..... ........++.+...+.|.|..+...|.|.|+|.|.|..
T Consensus 126 ~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~---~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 202 (212)
T 1q0x_L 126 EELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGME---TTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEG 202 (212)
T ss_dssp HHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE---ECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETT
T ss_pred HHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCee---cCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCC
Confidence 34468899999999985443 8999999988764321 011122233445556789999999999999999999987
Q ss_pred CceeEEE
Q psy1672 343 GIADANF 349 (600)
Q Consensus 343 G~~~~~v 349 (600)
....+++
T Consensus 203 ~~~~~~v 209 (212)
T 1q0x_L 203 HSSNKTL 209 (212)
T ss_dssp EEEEEEE
T ss_pred cceeeee
Confidence 6644443
No 363
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.21 E-value=2.6e-06 Score=80.32 Aligned_cols=76 Identities=16% Similarity=0.212 Sum_probs=56.1
Q ss_pred ccccceeeeEeecC-CCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCcee
Q psy1672 268 SSENATVVCRVDSI-PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIAD 346 (600)
Q Consensus 268 ~G~~v~L~C~v~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 346 (600)
.++.+.|.|.+.+. |.+.+.|++++..+.... +..+...+. ...|.|.+++.+|.|.|+|.|.|..|...
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~------~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~ 86 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSD------RVKTGVTGE---QIWLQINEPTPNDKGKYVMELFDGKTGHQ 86 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCS------SEEEEEETT---EEEEEEESCCGGGCEEEEEEEECSSCEEE
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCC------eEEEEEeCC---EEEEEECCCCcccCEEEEEEEecCCcceE
Confidence 45667788888764 588999999998876432 333333331 34699999999999999999999888776
Q ss_pred EEEEEE
Q psy1672 347 ANFTLQ 352 (600)
Q Consensus 347 ~~v~L~ 352 (600)
..+.+.
T Consensus 87 ~~~~l~ 92 (212)
T 2r15_A 87 KTVDLS 92 (212)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 655553
No 364
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.21 E-value=1.8e-06 Score=81.84 Aligned_cols=96 Identities=14% Similarity=0.225 Sum_probs=63.2
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcC--eecc---CC-c--ccCccceEEEeeCCceeeeeeEEEecCC
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RLLL---NN-T--AFSSYQRIFVIEQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~l~---~~-~--~~~~~~~~~~~~~g~~~~~s~L~I~~v~ 327 (600)
.+...+..+.+.+|+.++|.|.+.+.|.+.+.|+++. ..+. .. . ......++.+...+ ....|.|.+++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~ 79 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSG---TDFTLTISDLE 79 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEECSCC
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCC---CEEEEEECCCC
Confidence 3444466788899999999999999999999999842 2110 00 0 00001233322211 23579999999
Q ss_pred CCCCeEEEEEEecCCCc---eeEEEEEEEE
Q psy1672 328 ESDSGRFYCVAENRAGI---ADANFTLQVT 354 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~~G~---~~~~v~L~V~ 354 (600)
.+|+|.|+|.|.|..+. ....+.+.|.
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 109 (213)
T 3nl4_L 80 CADAATYYCQSTYENPTYVSFGGGTEVGVK 109 (213)
T ss_dssp GGGCEEEEEEECCSSTTTCEECCCEEEEEE
T ss_pred hHHCEEEEEecCCCCceeEEeCCCeEEEEe
Confidence 99999999999998773 3334455553
No 365
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.20 E-value=2.9e-06 Score=79.64 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=64.2
Q ss_pred cccccccccccceeeeEeec-CCCCeeEEEEcCeeccC---Ccc--------cCc-cceEEEeeCCceeeeeeEEEecCC
Q psy1672 261 SRYVEAVSSENATVVCRVDS-IPPAAISWYWNGRLLLN---NTA--------FSS-YQRIFVIEQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g-~P~p~i~W~~~g~~l~~---~~~--------~~~-~~~~~~~~~g~~~~~s~L~I~~v~ 327 (600)
+..+.+..|+.++|.|.+.+ .+.+.|.|+++++.+.. ... .+. ..|+.+.. .+.|.|.+++
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~------~~sL~I~~v~ 78 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ------SYSLQLSNLK 78 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECT------TCCEEECSCC
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECC------CeEEEECCCC
Confidence 45677889999999999875 45579999998764421 100 000 02333332 2489999999
Q ss_pred CCCCeEEEEEEecCCCceeEEEEEEEEE
Q psy1672 328 ESDSGRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
.+|.|.|+|.|.|..|.....+.|.|..
T Consensus 79 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~ 106 (193)
T 2if7_A 79 MEDTGSYRAQISTKTSAKLSSYTLRILR 106 (193)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cccCceEEEEEEecCCCeEEEEEEEEEc
Confidence 9999999999999998877777887753
No 366
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.20 E-value=1.1e-06 Score=82.09 Aligned_cols=69 Identities=23% Similarity=0.420 Sum_probs=54.6
Q ss_pred cccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEec-CCCCCCeEEEEEEecCCC
Q psy1672 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN-AQESDSGRFYCVAENRAG 343 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~-v~~~d~G~Y~C~a~N~~G 343 (600)
.+..|+.+.|.|.+.+ + +.|.|+++|+.+.... + ..|.|.+ ++..|+|.|+|.|.|..|
T Consensus 10 v~~~G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~~------------~------~~L~I~~~~~~~D~G~Y~C~a~n~~g 69 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-D-ENLKWEKNGQELPQKH------------D------KHLVLQDFSEVEDSGYYVCYTPASNK 69 (186)
T ss_dssp EEEETTEEEEECSSCC-C-TTCEEEETTEEECSCC------------C------SEEEEESCCTTTSCEEEEEECSSCCC
T ss_pred EEeCCcEEEEEEeCCC-C-CceEEEECCEECCCCC------------C------CEEEECCCCccccCEEEEEEEEeCCC
Confidence 3467999999999987 4 3599999998775421 1 2699999 999999999999999999
Q ss_pred ceeEEEEEEE
Q psy1672 344 IADANFTLQV 353 (600)
Q Consensus 344 ~~~~~v~L~V 353 (600)
.....+.+.|
T Consensus 70 ~~~~~~~~~v 79 (186)
T 1jbj_A 70 NTYLYLKARV 79 (186)
T ss_dssp CCCEEECCCC
T ss_pred cEEEEEEEEE
Confidence 8655554444
No 367
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.20 E-value=3.7e-06 Score=79.58 Aligned_cols=94 Identities=17% Similarity=0.355 Sum_probs=63.7
Q ss_pred cccccccccccccccceeeeEeecCCCCeeEEEEc--Ceecc---C-C--cccCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWN--GRLLL---N-N--TAFSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~l~---~-~--~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
+...+ .+.+.+|+.++|.|.+.+.|.+.+.|++. +.... . . .......++.+...+ ....|.|.+++.
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~ 79 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSG---NMATLTISKAQA 79 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET---TEEEEEESSCCG
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecC---CEEEEEECCCCh
Confidence 34445 77889999999999999999999999982 22110 0 0 000011233322211 245799999999
Q ss_pred CCCeEEEEEEecCCC---ceeEEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAG---IADANFTLQVT 354 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G---~~~~~v~L~V~ 354 (600)
+|+|.|+|.|.|..| .....+.|.|.
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 80 GDEADYYCQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp GGCEEEEEEEEETTTTEEEEBCCEEEEEE
T ss_pred hhCEEEEEEeccCCcceeEEcCceEEEEe
Confidence 999999999999988 34455667765
No 368
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.19 E-value=2.1e-06 Score=89.46 Aligned_cols=91 Identities=22% Similarity=0.334 Sum_probs=68.6
Q ss_pred ccccccccccccccccccceeeeEeec-CCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDS-IPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g-~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+...+..+.+.+|+.++|.|.+.+ .|.+.+.|+++|..+..... +..... ..+.|.|.+++..|.|
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~-----~~~~~~-----~~~~L~i~~~~~~D~G 75 (395)
T 1bih_A 6 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEH-----NAALRK-----DEGSLVFLRPQASDEG 75 (395)
T ss_dssp CCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTT-----TEEECT-----TSCCEEESSCCGGGCE
T ss_pred CCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccc-----eEEEec-----CCceEEEecCCCCCCc
Confidence 456666677788899999999999998 88999999999987754331 111111 1247999999999999
Q ss_pred EEEEEEecCCCcee-EEEEEEEE
Q psy1672 333 RFYCVAENRAGIAD-ANFTLQVT 354 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~-~~v~L~V~ 354 (600)
.|+|.|.|..|... ..+.+.+.
T Consensus 76 ~Y~C~a~n~~g~~~s~~~~l~v~ 98 (395)
T 1bih_A 76 HYQCFAETPAGVASSRVISFRKT 98 (395)
T ss_dssp EEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEEEeCCCeEEeEEEEEEEE
Confidence 99999999988764 33555554
No 369
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.18 E-value=2e-06 Score=80.67 Aligned_cols=72 Identities=17% Similarity=0.079 Sum_probs=44.6
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
..+.+|+.++|.|.+.+.| +.+.|++++..+..... .......+ ...+.|.|.+++.+|.|.|+|.|.|..+
T Consensus 109 ~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~-----~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 109 PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTL-----DSQLTPSG--QFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp --------CEEEEEESSCC-SEEEEEEC---CCEEEE-----ECEECTTS--CEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred ccccCCCcEEEEEEcCCCC-CEEEEEccCCccccccc-----ccccccCC--CceeEEEeeecCcccCeeEEEEEEccCC
Confidence 4678899999999999988 89999999876532110 00011111 1235899999999999999999999865
No 370
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.18 E-value=1.9e-06 Score=86.75 Aligned_cols=85 Identities=20% Similarity=0.364 Sum_probs=63.1
Q ss_pred cccccccccccccccccceeeeEeecC-CCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSI-PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
|.+. .+....+.+|+.++|.|.+.+. |.+.+.|+++++.+.... +..+. .+ ...|.|.+++..|.|.
T Consensus 8 P~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~------~~~~~-~~----~~~L~i~~~~~~d~G~ 75 (317)
T 2y25_A 8 PHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE------KHDFK-DG----ICTLLITEFSKKDAGI 75 (317)
T ss_dssp CEEE-EEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSC------C------C----CEEEEETTCCSTTCSC
T ss_pred CcEe-eeeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCC------cEEEE-CC----eEEEEEccCCcccCeE
Confidence 4444 3335788899999999999987 778999999998876433 11111 11 2589999999999999
Q ss_pred EEEEEecCCCceeEEEEE
Q psy1672 334 FYCVAENRAGIADANFTL 351 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L 351 (600)
|+|.|.|..|.....+.+
T Consensus 76 Y~C~~~n~~g~~~~~~~l 93 (317)
T 2y25_A 76 YEVILKDDRGKDKSRLKL 93 (317)
T ss_dssp EEEEEESSSCEEEEEECC
T ss_pred EEEEEECCCCcEEEEEEE
Confidence 999999999876654433
No 371
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.18 E-value=1.4e-06 Score=73.87 Aligned_cols=71 Identities=23% Similarity=0.409 Sum_probs=48.8
Q ss_pred cccccccccccccccccceeeeEeecCCCC-----eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPA-----AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQES 329 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p-----~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~ 329 (600)
|.+...+. ..+.+|+.++|.|.+.+.+.. .+.|+++|..+.. .. ..+.+.|.+++..
T Consensus 9 P~l~~~p~-~~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~------------~~-----~~~~l~i~~v~~~ 70 (108)
T 4hwn_A 9 PILRAVPS-AEPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS------------RG-----LSSEFQIPTASED 70 (108)
T ss_dssp CEEEEESC-SSCBTTCCEEEEEEC---------CCEEEEEETTEEEEE------------EE-----SCCEEEESSCCGG
T ss_pred CEEEecCC-CcCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC------------CC-----cccEEEeCccCcc
Confidence 34433333 357789999999999865544 4999999876531 00 1237899999999
Q ss_pred CCeEEEEEEecCCC
Q psy1672 330 DSGRFYCVAENRAG 343 (600)
Q Consensus 330 d~G~Y~C~a~N~~G 343 (600)
|+|.|+|.+.|..|
T Consensus 71 dsG~Y~C~~~~~~~ 84 (108)
T 4hwn_A 71 HSGSYWCEAATEDN 84 (108)
T ss_dssp GCEEEEEEEECTTS
T ss_pred cCeEEEEEEEeCCC
Confidence 99999999999875
No 372
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.17 E-value=2.1e-06 Score=98.79 Aligned_cols=95 Identities=19% Similarity=0.301 Sum_probs=69.3
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCc-ccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNT-AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~-~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
|.+...+....+..|+.++|.|.+.|.|.|.|.|++++..+.... ......+..+ .+ +.|.|.+++..|.|.
T Consensus 715 P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~-~~------~~L~i~~v~~~d~G~ 787 (816)
T 3dmk_A 715 PRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV-EE------GTLHVDNIQKTNEGY 787 (816)
T ss_dssp EEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEE-ET------TEEEECSCCGGGCEE
T ss_pred CceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEe-cC------CEEEECcCChhhCeE
Confidence 333334455667789999999999999999999999775443211 1111111211 22 379999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
|+|.|.|.+|.+...+.+.....
T Consensus 788 Y~C~a~N~~G~~~~~v~~~~~~~ 810 (816)
T 3dmk_A 788 YLCEAINGIGSGLSAVIMISVQA 810 (816)
T ss_dssp EEEEEECSSSSCEEEEEEEEEEC
T ss_pred EEEEEEeCCCCCcEEEEEEEeec
Confidence 99999999999999988877543
No 373
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.17 E-value=2.6e-06 Score=87.27 Aligned_cols=98 Identities=20% Similarity=0.317 Sum_probs=69.6
Q ss_pred cccccccccccccccccccceeeeEeecCCC-----------CeeEEEEcCeeccCCcccC---ccceEEEeeCCceeee
Q psy1672 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIPP-----------AAISWYWNGRLLLNNTAFS---SYQRIFVIEQGEYERK 318 (600)
Q Consensus 253 C~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~-----------p~i~W~~~g~~l~~~~~~~---~~~~~~~~~~g~~~~~ 318 (600)
|..........+.+.+|+.+.|.|.+.+.|. +.|.|++++.......... ...++.. . .
T Consensus 6 c~~~~~~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~-~------~ 78 (349)
T 4dep_C 6 CDDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISK-E------K 78 (349)
T ss_dssp CEEEEECCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEE-E------T
T ss_pred ccccccceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEee-c------C
Confidence 4444444456788899999999999997664 8999999874221110000 1122211 1 2
Q ss_pred eeEEEecCCCCCCeEEEEEEecCCCceeEEEEEEEEEcc
Q psy1672 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 319 s~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~~~~ 357 (600)
+.|.|.+++..|+|.|+|.|.|..|.....+.|.|...+
T Consensus 79 ~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~ 117 (349)
T 4dep_C 79 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKD 117 (349)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred CEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCC
Confidence 379999999999999999999999988888888887643
No 374
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.16 E-value=2.2e-06 Score=89.04 Aligned_cols=86 Identities=22% Similarity=0.397 Sum_probs=63.7
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
..+..|+.+.|.|.+.|.|.+.+.|++++.............+... ..+.|.|.+++..|.|.|+|.|.|..|
T Consensus 222 ~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~g 294 (388)
T 2v5m_A 222 LELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ-------VSGTLIIKDAVVEDSGKYLCVVNNSVG 294 (388)
T ss_dssp EEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE-------ETTEEEESSCCGGGCEEEEEEEECSSC
T ss_pred eEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec-------ccCEEEECcCCHHHCeEEEEEEecCCC
Confidence 4467899999999999999999999997543221111111112211 124799999999999999999999999
Q ss_pred ceeEEEEEEEEEc
Q psy1672 344 IADANFTLQVTYR 356 (600)
Q Consensus 344 ~~~~~v~L~V~~~ 356 (600)
..+..+.|.|...
T Consensus 295 ~~~~~~~l~V~~~ 307 (388)
T 2v5m_A 295 GESVETVLTVTAP 307 (388)
T ss_dssp EEEEEEEEEEEEE
T ss_pred ceeEEEEEEEeCC
Confidence 9888888888654
No 375
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.16 E-value=4.1e-06 Score=78.61 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=53.8
Q ss_pred ccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
..+.+|+.++|.|.+.+. .+.+.|+++|..+.... .+.....++ .....|.|.+++.+|.|.|+|.|.|..+
T Consensus 110 ~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~-----~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQC-----LNSQPHARG--SSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp SEEETTCCEEEEEECSSC-CSEEEEEEC------CE-----EEC--------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred cccCCCCcEEEEEecCCC-CcEEEEEECCCccCCcc-----ccccccCCC--cceeEEEecccCcccCeEEEEEEEeCCC
Confidence 567789999999999988 78999999987653211 000011111 1235899999999999999999999876
Q ss_pred ce-----eEEEEEEE
Q psy1672 344 IA-----DANFTLQV 353 (600)
Q Consensus 344 ~~-----~~~v~L~V 353 (600)
.. +..+.|.|
T Consensus 182 ~~~~s~~S~~~~l~V 196 (198)
T 1ugn_A 182 PYEWSLPSDLLELLV 196 (198)
T ss_dssp TTEECCCCCCEEEEE
T ss_pred CccccCcCceEEEEe
Confidence 32 44455555
No 376
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.16 E-value=1.7e-06 Score=81.15 Aligned_cols=89 Identities=17% Similarity=0.177 Sum_probs=61.9
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+. ..+.+|+.++|.|.+.+.|. .+.|++++..+.... + ... .....+.|.|.+++..|.|.|
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~------~--~~~--~~~~~~~L~i~~v~~~D~G~Y 73 (196)
T 2d3v_A 6 ATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDT------Q--NPL--EPKNKARFSIPSMTEHHAGRY 73 (196)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEE------E--CCC--SSTTEEEEEESSCCGGGCEEE
T ss_pred CEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCccc------c--ccc--CCccccEEEeccCChhHCeEE
Confidence 34443343 36789999999999998765 999999887653211 0 000 011235799999999999999
Q ss_pred EEEEecCCCce--eEEEEEEEEE
Q psy1672 335 YCVAENRAGIA--DANFTLQVTY 355 (600)
Q Consensus 335 ~C~a~N~~G~~--~~~v~L~V~~ 355 (600)
+|.|.|..|.. +..+.|.|..
T Consensus 74 ~C~a~n~~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 74 RCYYYSPAGWSEPSDPLELVVTG 96 (196)
T ss_dssp EEEEEETTEECBCCCCEEEEEEC
T ss_pred EEEEeCCCCcCCcCccEEEEecC
Confidence 99999988743 3456666654
No 377
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.15 E-value=3.2e-06 Score=85.93 Aligned_cols=82 Identities=21% Similarity=0.367 Sum_probs=54.1
Q ss_pred ccccccceeeeEeecCCC-C-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 266 AVSSENATVVCRVDSIPP-A-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 266 v~~G~~v~L~C~v~g~P~-p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
+.+|+.+.|.|.+.|.++ + .|.|+++|+.+.... ..+.....++.+...+.|.|..++..|.|.|+|.|.|..|
T Consensus 232 ~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~----~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~ 307 (327)
T 2wng_A 232 VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTET----ASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQ 307 (327)
T ss_dssp CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEE----CCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTC
T ss_pred cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcc----cCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCC
Confidence 668999999999998544 4 799999998875432 1122233345455557899999999999999999999998
Q ss_pred ce-eEEEEE
Q psy1672 344 IA-DANFTL 351 (600)
Q Consensus 344 ~~-~~~v~L 351 (600)
.. .+++.+
T Consensus 308 ~~~s~~~~~ 316 (327)
T 2wng_A 308 PAVSKSHDL 316 (327)
T ss_dssp CCEEEEEEC
T ss_pred CCchhheEE
Confidence 75 444443
No 378
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.14 E-value=3.2e-06 Score=74.12 Aligned_cols=92 Identities=22% Similarity=0.379 Sum_probs=60.1
Q ss_pred cccccccccccccceeeeEeec---CCCCeeEEEEcCeeccCCcc------c-----------------Cc-cceEEEee
Q psy1672 259 MDSRYVEAVSSENATVVCRVDS---IPPAAISWYWNGRLLLNNTA------F-----------------SS-YQRIFVIE 311 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g---~P~p~i~W~~~g~~l~~~~~------~-----------------~~-~~~~~~~~ 311 (600)
..+..+.+..|+.++|.|.+.. .+.+.+.|++.+........ + .. ..|+.+..
T Consensus 9 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~ 88 (135)
T 1xt5_A 9 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 88 (135)
T ss_dssp CSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC
T ss_pred CCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec
Confidence 3456678889999999999753 57789999995432100000 0 00 02232221
Q ss_pred CCceeeeeeEEEecCCCCCCeEEEEEEecCC-----CceeEEEEEEEE
Q psy1672 312 QGEYERKSSLVLTNAQESDSGRFYCVAENRA-----GIADANFTLQVT 354 (600)
Q Consensus 312 ~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~-----G~~~~~v~L~V~ 354 (600)
. ....|.|.+++.+|+|.|+|.+.|.. |.....+.|.|.
T Consensus 89 ~----~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~ 132 (135)
T 1xt5_A 89 L----AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVT 132 (135)
T ss_dssp T----TSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEE
T ss_pred C----CCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEe
Confidence 1 13579999999999999999999954 444577777774
No 379
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.14 E-value=1.9e-06 Score=82.45 Aligned_cols=78 Identities=17% Similarity=0.201 Sum_probs=57.7
Q ss_pred cccccccceeeeEeecC-CCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 265 EAVSSENATVVCRVDSI-PPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
.+..|+.++|.|.+.|. |.| .|.|+++|+.+.... ......++.+...+.|.|.++...| |.|+|.|.|..
T Consensus 138 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~------~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~ 210 (222)
T 1q9r_B 138 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT------FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPA 210 (222)
T ss_dssp CCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE------EEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGG
T ss_pred cccCCCcEEEEEEEccEECCCCEEEEecCCeEcceEe------ccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccC
Confidence 35679999999999985 888 999999887653211 1112234444556789999999889 99999999999
Q ss_pred CceeEEE
Q psy1672 343 GIADANF 349 (600)
Q Consensus 343 G~~~~~v 349 (600)
|......
T Consensus 211 ~~~~~~~ 217 (222)
T 1q9r_B 211 SSTKVDK 217 (222)
T ss_dssp GTEEEEE
T ss_pred CCCcEEE
Confidence 8765443
No 380
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.14 E-value=9.6e-06 Score=68.50 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=56.8
Q ss_pred cccccccccceeeeEeecCCCC-----eeEEEEcCee-c---cCCcc-----c-CccceEEEeeCCceeeeeeEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPA-----AISWYWNGRL-L---LNNTA-----F-SSYQRIFVIEQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p-----~i~W~~~g~~-l---~~~~~-----~-~~~~~~~~~~~g~~~~~s~L~I~~v~ 327 (600)
.+.+..|++++|.|.+.+.|.+ .+.|++++.. + ..... . ....+..+..+ ...|.|.+++
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-----~~sL~I~~v~ 77 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSD-----SWTLRLHNLQ 77 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETT-----TTEEEECSCC
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECC-----CEEEEEcCCC
Confidence 3567889999999999765543 3999996531 1 01100 0 01123333222 2489999999
Q ss_pred CCCCeEEEEEEecCCCceeEEEEEE
Q psy1672 328 ESDSGRFYCVAENRAGIADANFTLQ 352 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~~G~~~~~v~L~ 352 (600)
.+|+|.|+|.+.+..+.....+.+.
T Consensus 78 ~~D~G~Y~C~v~~~~~~~~~~~~~~ 102 (110)
T 1ncn_A 78 IKDKGLYQCIIHHKKPTGMIRIHQM 102 (110)
T ss_dssp GGGCEEEEEEEEEECSSSEEEEEEE
T ss_pred hHHCEEEEEEEEcCCCCceEEEEEE
Confidence 9999999999999988876655544
No 381
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.14 E-value=4.7e-06 Score=79.09 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=61.6
Q ss_pred cccccccccccccccceeeeEeecC-CCCeeEEEEcC--eecc---C-Cc------ccCccceEEEeeCCceeeeeeEEE
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSI-PPAAISWYWNG--RLLL---N-NT------AFSSYQRIFVIEQGEYERKSSLVL 323 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g--~~l~---~-~~------~~~~~~~~~~~~~g~~~~~s~L~I 323 (600)
+...+ .+.+.+|+.++|.|.+.+. |.+.+.|++.. .... . .. ......++.+... .....|.|
T Consensus 4 v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~L~I 79 (218)
T 3s96_B 4 LTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSS---GADRYLSI 79 (218)
T ss_dssp EECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEE---TTEEEEEE
T ss_pred EEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecC---CceEEEEE
Confidence 34445 7788999999999999998 89999999832 1110 0 00 0000112222211 12457999
Q ss_pred ecCCCCCCeEEEEEEecCCC-----ceeEEEEEEEE
Q psy1672 324 TNAQESDSGRFYCVAENRAG-----IADANFTLQVT 354 (600)
Q Consensus 324 ~~v~~~d~G~Y~C~a~N~~G-----~~~~~v~L~V~ 354 (600)
.+++.+|+|.|+|.|.|..| .....+.|.|.
T Consensus 80 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~ 115 (218)
T 3s96_B 80 SNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVL 115 (218)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEE
T ss_pred ccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEe
Confidence 99999999999999999887 22334566665
No 382
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.14 E-value=2.2e-06 Score=87.49 Aligned_cols=93 Identities=17% Similarity=0.208 Sum_probs=71.5
Q ss_pred cccccccccccccccccceeeeEee-------cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVD-------SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~-------g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~ 327 (600)
|.+...+....+.+|+.+.|.|.+. +.|.+.|.|++++..+..... ...++. ..+ +.|.|.+++
T Consensus 19 p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~--~~~~~~-~~~------~~L~i~~v~ 89 (339)
T 3o4o_C 19 RFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGE--EETRMW-AQD------GALWLLPAL 89 (339)
T ss_dssp EEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCC--SSSCEE-EET------TEEEESSBC
T ss_pred HhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCcc--ccccEE-eeC------CeEEECCCC
Confidence 4555566778889999999999998 889999999998876322111 012222 222 379999999
Q ss_pred CCCCeEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 328 ESDSGRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
..|.|.|+|.|.|..|.....+.|.|...
T Consensus 90 ~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~ 118 (339)
T 3o4o_C 90 QEDSGTYVCTTRNASYCDKMSIELRVFEN 118 (339)
T ss_dssp TTCCEEEECCEEETTEEEEEEEEEEEECS
T ss_pred cccCEEEEEEEECCcceEEEEEEEEEEcC
Confidence 99999999999999998888888888654
No 383
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.14 E-value=1.7e-06 Score=83.21 Aligned_cols=81 Identities=17% Similarity=0.323 Sum_probs=57.0
Q ss_pred ccccccceeeeEeecCCC--CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 266 AVSSENATVVCRVDSIPP--AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 266 v~~G~~v~L~C~v~g~P~--p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
+..|+.++|.|.+.|.++ +.|.|+++|+.+...... .......++.+...+.|.|..+...|.|.|+|.|.|..+
T Consensus 147 ~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~---~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 223 (234)
T 2j6e_L 147 ELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVET---TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 223 (234)
T ss_dssp HHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEE---CCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTB
T ss_pred HhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccc---cCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCC
Confidence 345889999999998544 389999999887543210 000111233334456799999999999999999999988
Q ss_pred ceeEEE
Q psy1672 344 IADANF 349 (600)
Q Consensus 344 ~~~~~v 349 (600)
..++++
T Consensus 224 ~~~~~~ 229 (234)
T 2j6e_L 224 TVEKTV 229 (234)
T ss_dssp CCCEEE
T ss_pred ceEEec
Confidence 765554
No 384
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.13 E-value=5.4e-06 Score=70.64 Aligned_cols=92 Identities=24% Similarity=0.296 Sum_probs=57.7
Q ss_pred cccccccccccceeeeEeec-CCCCeeEEEEcCee--------cc-CCcc--cCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 261 SRYVEAVSSENATVVCRVDS-IPPAAISWYWNGRL--------LL-NNTA--FSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g-~P~p~i~W~~~g~~--------l~-~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
+..+.+.+|+.++|.|.+.+ .....+.|++.... +. .... .....++.+..+ .......|.|.+++.
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~sL~I~~v~~ 82 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGH-ISEGDVSLTIENSVE 82 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSC-GGGTBCCEEESSCCG
T ss_pred cceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecC-CCCCeEEEEECCCCc
Confidence 45677889999999999875 34567999995411 00 0000 001122222111 111245799999999
Q ss_pred CCCeEEEEEEecCCCce--eEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGIA--DANFTLQV 353 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~--~~~v~L~V 353 (600)
+|+|.|.|.+.+..+.. ...+.|.|
T Consensus 83 ~DsG~Y~C~v~~~~~~~~~~~~~~l~V 109 (116)
T 2or8_A 83 SDSGLYCCRVEIPGWFNDQKVTFSLQV 109 (116)
T ss_dssp GGCEEEEEEECCSSTTCCEEEEEEEEE
T ss_pred ccCEEEEEEEEcCCcccccEEEEEEEE
Confidence 99999999999976554 45555555
No 385
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.13 E-value=6.1e-07 Score=85.10 Aligned_cols=89 Identities=24% Similarity=0.367 Sum_probs=60.7
Q ss_pred cccccccccccccccccceeeeEeecC-CC-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSI-PP-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+........+..|+.++|.|.+.|. |+ +.|.|+++|+.+....... ......++ +...+.|.|.+++.+|.|
T Consensus 114 p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~---~~~~~~~~-~~~~s~L~i~~~~~~d~G 189 (212)
T 1nfd_E 114 PKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTT---KPSKQGQN-YMTSSYLSLTADQWKSHN 189 (212)
T ss_dssp CEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCC---CCBCSSSC-EEEEEBCCEEHHHHHTCS
T ss_pred CEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecC---CceecCCC-ceEEEEEEEchhhcCCCC
Confidence 444333333345578999999999987 54 7999999998876442110 00011122 334567999999999999
Q ss_pred EEEEEEecCCCceeE
Q psy1672 333 RFYCVAENRAGIADA 347 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~ 347 (600)
.|+|.|.|..+..++
T Consensus 190 ~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 190 RVSCQVTHEGETVEK 204 (212)
T ss_dssp CEEEEEECTTTTCCC
T ss_pred eEEEEEEeCCceEEE
Confidence 999999999876443
No 386
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.13 E-value=3.1e-06 Score=83.20 Aligned_cols=95 Identities=16% Similarity=0.272 Sum_probs=65.1
Q ss_pred cccccccccccceeeeEe---ecCCCCeeEEEEc-CeeccCCccc---------------CccceEEEeeCCceeeeeeE
Q psy1672 261 SRYVEAVSSENATVVCRV---DSIPPAAISWYWN-GRLLLNNTAF---------------SSYQRIFVIEQGEYERKSSL 321 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v---~g~P~p~i~W~~~-g~~l~~~~~~---------------~~~~~~~~~~~g~~~~~s~L 321 (600)
+....+..|+.++|.|.+ .+.|.+.+.|+++ +......... ....++.+..+ .....+.|
T Consensus 125 p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L 203 (268)
T 3mj6_A 125 PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGD-ISRNDGSI 203 (268)
T ss_dssp CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSC-GGGTBCCE
T ss_pred CCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeecc-CCCCeEEE
Confidence 345678899999999999 5779999999993 3221110000 00011222111 11224589
Q ss_pred EEecCCCCCCeEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 322 ~I~~v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
.|.+++..|.|.|+|.|.|..|.....+.|.|...
T Consensus 204 ~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 238 (268)
T 3mj6_A 204 KLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQD 238 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcC
Confidence 99999999999999999999999888888888544
No 387
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.13 E-value=1.7e-06 Score=92.13 Aligned_cols=71 Identities=20% Similarity=0.285 Sum_probs=58.2
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
....+.+|+.+.|.|.+.|.|.|.|.|++++..+.. .|. .+ .++..|.|.|+|.|.|.
T Consensus 378 ~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~--------------~g~-----~~---~v~~~d~G~Y~C~a~N~ 435 (450)
T 1z7z_I 378 GNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP--------------IGE-----SV---TVTRDLEGTYLCRARST 435 (450)
T ss_dssp SEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC--------------TTS-----CE---ECCGGGCEEEEEEEEET
T ss_pred CceeEcCCCeEEEEEecccCCCCcEEEEECCcccCC--------------CCC-----eE---eEehhhCeEEEEEEEeC
Confidence 455778899999999999999999999998863221 121 12 57889999999999999
Q ss_pred CCceeEEEEEEEE
Q psy1672 342 AGIADANFTLQVT 354 (600)
Q Consensus 342 ~G~~~~~v~L~V~ 354 (600)
.|..+..+.|.|.
T Consensus 436 ~G~~~~~~~l~V~ 448 (450)
T 1z7z_I 436 QGEVTREVTVNVL 448 (450)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCceeEEEEEEEE
Confidence 9999999998884
No 388
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.13 E-value=4.2e-06 Score=72.11 Aligned_cols=95 Identities=22% Similarity=0.291 Sum_probs=58.1
Q ss_pred cccccccccccceeeeEeecC----CCCeeEEEEcCee------cc-C--Ccc-----cCccceEEEeeCCceeeeeeEE
Q psy1672 261 SRYVEAVSSENATVVCRVDSI----PPAAISWYWNGRL------LL-N--NTA-----FSSYQRIFVIEQGEYERKSSLV 322 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~----P~p~i~W~~~g~~------l~-~--~~~-----~~~~~~~~~~~~g~~~~~s~L~ 322 (600)
+..+.+..|+.++|.|.+... +...+.|++.+.. +. . ... .....|+.+..+ ......+|.
T Consensus 6 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~ 84 (124)
T 1neu_A 6 DREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGD-PSWKDGSIV 84 (124)
T ss_dssp CSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCB-GGGTBCCEE
T ss_pred CCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecC-CcCCeEEEE
Confidence 456778899999999998643 4678999984320 10 0 000 000123333211 011235899
Q ss_pred EecCCCCCCeEEEEEEecCCCc--eeEEEEEEEEEc
Q psy1672 323 LTNAQESDSGRFYCVAENRAGI--ADANFTLQVTYR 356 (600)
Q Consensus 323 I~~v~~~d~G~Y~C~a~N~~G~--~~~~v~L~V~~~ 356 (600)
|.+++.+|+|.|+|.+.+..+. ....+.|.|..+
T Consensus 85 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~ 120 (124)
T 1neu_A 85 IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEK 120 (124)
T ss_dssp ECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC-
T ss_pred EccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecC
Confidence 9999999999999999998875 366777877543
No 389
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.12 E-value=1.5e-06 Score=82.21 Aligned_cols=92 Identities=15% Similarity=0.264 Sum_probs=63.6
Q ss_pred cccccccccccccccccceeeeEeecCC--CCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIP--PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P--~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+...+....+..|+.++|.|.+.|.+ .+.+.|+++|+.+..... ........++.+...+.|.|..+...|.|
T Consensus 112 P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~---~~~~~~~~~~~~~~~s~L~i~~~~~~d~g 188 (211)
T 3tv3_L 112 PSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVE---TTTPSKQSNNKYAASSYLSLTPEQWKSHR 188 (211)
T ss_dssp CEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEE---ECCCEECTTSSEEEEEEEEECHHHHHHSS
T ss_pred CeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcc---cCCceECCCCCEEEEEEEEEcHHHhCCCC
Confidence 4444334344444799999999999853 578999999988764221 11111223444455578999999989999
Q ss_pred EEEEEEecCCCceeEEE
Q psy1672 333 RFYCVAENRAGIADANF 349 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v 349 (600)
.|+|.|.|..+...+.+
T Consensus 189 ~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 189 SYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CEEEEEEETTEEEEEEE
T ss_pred eEEEEEEECCCCEEeec
Confidence 99999999987766554
No 390
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.12 E-value=4e-06 Score=76.23 Aligned_cols=78 Identities=21% Similarity=0.475 Sum_probs=58.8
Q ss_pred ccccccccccccccccceeeeEeecCC-CCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIP-PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P-~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
.+...+....+..|+.+.|.|.+.+.| .+.+.|++++..+.... ..+.+.+++..|.|.|
T Consensus 6 ~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~-------------------~~~~~~~~~~~d~G~Y 66 (170)
T 3ry4_A 6 VLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT-------------------QPSYRFKANNNDSGEY 66 (170)
T ss_dssp EEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC-------------------SSEEEEECCGGGCEEE
T ss_pred EEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc-------------------cceEEEecccccCeEE
Confidence 334445556788999999999999887 57999999988765421 1456778999999999
Q ss_pred EEEEecCCCceeEEEEEEEE
Q psy1672 335 YCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~ 354 (600)
+|.|.|..+.. .+.|.|.
T Consensus 67 ~C~~~~~~~s~--~~~l~v~ 84 (170)
T 3ry4_A 67 TCQTGQTSLSD--PVHLTVL 84 (170)
T ss_dssp EEEETTSBCCC--CEEEEEE
T ss_pred EEEEeCCCceE--eEEEEEE
Confidence 99999865544 3555554
No 391
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.12 E-value=3.8e-06 Score=71.42 Aligned_cols=80 Identities=20% Similarity=0.291 Sum_probs=53.6
Q ss_pred cccccccccccccceeeeEeecC--CCCeeEEEEc--CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSI--PPAAISWYWN--GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~--P~p~i~W~~~--g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
..+..+.+.+|+.++|.|.+.+. +.+.+.|++. +..... ......++.+..+. ......|+|.+++.+|+|.|
T Consensus 5 q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~--~~~~~~r~~~~~~~-~~~~~~L~I~~v~~~DsG~Y 81 (111)
T 2ywz_A 5 QTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEK--TISIGGRYDETVDK-GSKSFSLRISDLRVEDSGTY 81 (111)
T ss_dssp EECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCE--ECCSBTTEEEEEET-TTTEEEEEECSCCGGGCEEE
T ss_pred ECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceE--eeEeCCCEEEEEeC-CCCEEEEEECCCChhcCEEE
Confidence 34567788999999999999865 5678999984 221100 00012233322110 01246899999999999999
Q ss_pred EEEEecC
Q psy1672 335 YCVAENR 341 (600)
Q Consensus 335 ~C~a~N~ 341 (600)
.|.+.|.
T Consensus 82 ~C~~~~~ 88 (111)
T 2ywz_A 82 KCQADYS 88 (111)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999983
No 392
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.12 E-value=1.7e-06 Score=81.95 Aligned_cols=90 Identities=20% Similarity=0.316 Sum_probs=60.2
Q ss_pred cccccccccccccccccceeeeEeec-CCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDS-IPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g-~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+........+..|+.++|.|.+.| .|.+ .+.|+++|+.+...... ........++.+...+.|.|.+++..|.|
T Consensus 113 p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~--~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 190 (213)
T 3d9a_L 113 PTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN--SWTDQDSKDSTYSMSSTLTLTKDEYERHN 190 (213)
T ss_dssp CEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEE--EECCCCTTTCCEEEEEEEEEEHHHHHHCC
T ss_pred ceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeee--cCCCccCCCCCEEEEEEEEEeccccCCCC
Confidence 44433333333447889999999987 5665 89999999887654100 00011112333445678999999999999
Q ss_pred EEEEEEecCCCcee
Q psy1672 333 RFYCVAENRAGIAD 346 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~ 346 (600)
.|+|.|.|......
T Consensus 191 ~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 191 SYTCEATHKTSTSP 204 (213)
T ss_dssp EEEEEEECTTCSSC
T ss_pred EEEEEEEEccCCCc
Confidence 99999999887653
No 393
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.12 E-value=5e-06 Score=70.35 Aligned_cols=83 Identities=14% Similarity=0.338 Sum_probs=56.2
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcC--ee---cc-CCcc--cCccceEEEeeCCceeeeeeEEEecCC
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RL---LL-NNTA--FSSYQRIFVIEQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~---l~-~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~v~ 327 (600)
.+...+..+.+.+|+.++|.|.+.+.+.+.+.|++.. .. +. .... .....|+.+...+ ....|+|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~v~ 81 (109)
T 2q20_A 5 QMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSG---TDFTFTISSLQ 81 (109)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCC
T ss_pred cEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccC---CEEEEEECCCC
Confidence 4444566788999999999999998888899999843 21 11 0000 0011233332211 24579999999
Q ss_pred CCCCeEEEEEEecC
Q psy1672 328 ESDSGRFYCVAENR 341 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~ 341 (600)
.+|+|.|.|.+.|.
T Consensus 82 ~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 82 PEDIATYYCQQYDN 95 (109)
T ss_dssp GGGCEEEEEEECSS
T ss_pred hhhCEEEEEEEeeC
Confidence 99999999999985
No 394
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.12 E-value=9.4e-06 Score=68.98 Aligned_cols=94 Identities=15% Similarity=0.175 Sum_probs=61.8
Q ss_pred cccccccccccceeeeEeecCCC-CeeEEEEcCe-----ecc-CCcc--cCccceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPP-AAISWYWNGR-----LLL-NNTA--FSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~-p~i~W~~~g~-----~l~-~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
+..+.+.+|+.++|.|.+.+... ..+.|++... .+. .... .....|+.+..+. ......|+|.+++.+|+
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~~~~~Ds 86 (113)
T 1zox_A 8 PEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQ-RDFIFTVTMEDLRMSDA 86 (113)
T ss_dssp CSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEET-TTTEEEEEECSCCGGGC
T ss_pred CCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECC-cCCEEEEEEccCCHHHC
Confidence 45678899999999999985433 4699999532 111 0000 0112333333211 11245899999999999
Q ss_pred eEEEEEEecCCCceeEEEEEEEEE
Q psy1672 332 GRFYCVAENRAGIADANFTLQVTY 355 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~~ 355 (600)
|.|.|.+.+........+.|.|..
T Consensus 87 G~Y~C~v~~~~~~~~~~v~L~V~~ 110 (113)
T 1zox_A 87 GIYWCGITKGGLDPMFKVTVNIGP 110 (113)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEC
T ss_pred EEEEEeeEcCCCCccEEEEEEEEc
Confidence 999999999865667778887753
No 395
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.12 E-value=3.4e-06 Score=79.18 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=61.2
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+. ..+.+|+.++|.|.+.+.|. .+.|++++..+..... .... ....+.|.|.+++..|.|.|
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-----~~~~-----~~~~~~L~i~~v~~~D~G~Y 73 (198)
T 1ugn_A 6 PTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITR-----IPQE-----LVKKGQFPIPSITWEHTGRY 73 (198)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHT-----SCHH-----HHTTTEEEESSCCGGGCEEE
T ss_pred CeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccc-----cccc-----CCcccEEEECCCCHHHCeEE
Confidence 34443343 46789999999999998775 7999998876531110 0000 01124799999999999999
Q ss_pred EEEEecCC-C--ceeEEEEEEEEE
Q psy1672 335 YCVAENRA-G--IADANFTLQVTY 355 (600)
Q Consensus 335 ~C~a~N~~-G--~~~~~v~L~V~~ 355 (600)
+|.|.|.. | ..+..+.|.|..
T Consensus 74 ~C~a~n~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 74 RCYYGSDTAGRSESSDPLELVVTG 97 (198)
T ss_dssp EEEEEETTTEECCCCCCEEEEEEC
T ss_pred EEEEECCCCCcccCCccEEEEEcc
Confidence 99999987 5 334556666644
No 396
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.11 E-value=7.7e-06 Score=69.02 Aligned_cols=81 Identities=16% Similarity=0.292 Sum_probs=54.8
Q ss_pred ccccccccccccccceeeeEeecCCCCeeEEEEcC--e---ecc-CCccc--CccceEEEeeCCceeeeeeEEEecCCCC
Q psy1672 258 RMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--R---LLL-NNTAF--SSYQRIFVIEQGEYERKSSLVLTNAQES 329 (600)
Q Consensus 258 ~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~---~l~-~~~~~--~~~~~~~~~~~g~~~~~s~L~I~~v~~~ 329 (600)
...+..+.+.+|+.++|.|.+.+.+.+.+.|++.. . .+. ..... ....++.+... .....|+|.+++.+
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~~~ 81 (108)
T 1qfw_M 5 TQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGS---ATDFTLTISSVQAE 81 (108)
T ss_dssp EEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBC---SSEEEEEESSCCTT
T ss_pred EEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcC---CCEEEEEECCCChh
Confidence 33456778899999999999998877899999843 1 111 10000 01123332211 12457999999999
Q ss_pred CCeEEEEEEecC
Q psy1672 330 DSGRFYCVAENR 341 (600)
Q Consensus 330 d~G~Y~C~a~N~ 341 (600)
|+|.|.|.+.|.
T Consensus 82 DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 82 DFADYHCGQTYN 93 (108)
T ss_dssp CCSEEEEEECSS
T ss_pred hCEEEEEEEccC
Confidence 999999999986
No 397
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.10 E-value=3.4e-06 Score=79.02 Aligned_cols=70 Identities=11% Similarity=0.136 Sum_probs=51.6
Q ss_pred cccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCC
Q psy1672 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
.+..|+.++|.|.+.+ +++.+.|++++..+.... ....... ....+.|.|.+++.+|.|.|+|.|.|..+
T Consensus 110 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-----~~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLC-----LRSEHGA---QQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGS-----EEEEEEE---EEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred eecCCCeEEEEEecCC-CCCEEEEEeCCCccccee-----ecccccc---cCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 5678999999999987 456899999887553221 0111100 11245799999999999999999999986
No 398
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.10 E-value=7.3e-06 Score=71.29 Aligned_cols=92 Identities=14% Similarity=0.215 Sum_probs=59.9
Q ss_pred ccccccccccccceeeeEeecCCCC----eeEEEEcCe----------------eccCCcccCccceEEEeeCCce----
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPPA----AISWYWNGR----------------LLLNNTAFSSYQRIFVIEQGEY---- 315 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~p----~i~W~~~g~----------------~l~~~~~~~~~~~~~~~~~g~~---- 315 (600)
.+..+.+..|+.++|.|.+.+.+.+ .+.|++... .+.... ....|+.+..++..
T Consensus 8 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~R~~~~~~~~~~g~~ 85 (128)
T 3r0n_A 8 VLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPK--PGSERLSFVSAKQSTGQD 85 (128)
T ss_dssp CCSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSS--SCGGGEEESSCBCCCSTT
T ss_pred cCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCccccccc--ccCCcEEEeccccccccc
Confidence 3456788899999999999876655 789999521 111000 01234444332100
Q ss_pred ----eeeeeEEEecCCCCCCeEEEEEEec-CCCceeEEEEEEE
Q psy1672 316 ----ERKSSLVLTNAQESDSGRFYCVAEN-RAGIADANFTLQV 353 (600)
Q Consensus 316 ----~~~s~L~I~~v~~~d~G~Y~C~a~N-~~G~~~~~v~L~V 353 (600)
.....|.|.+++.+|+|.|+|.+.+ ..|..+..+.|.|
T Consensus 86 ~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 86 TEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp CCCBCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred cccCCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 1135899999999999999998765 5577777776653
No 399
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.09 E-value=3.2e-06 Score=81.91 Aligned_cols=90 Identities=20% Similarity=0.283 Sum_probs=61.4
Q ss_pred ccccccccccccceeeeEeec---CCCCeeEEEEcCeeccCCcc------------------------cCccceEEEeeC
Q psy1672 260 DSRYVEAVSSENATVVCRVDS---IPPAAISWYWNGRLLLNNTA------------------------FSSYQRIFVIEQ 312 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g---~P~p~i~W~~~g~~l~~~~~------------------------~~~~~~~~~~~~ 312 (600)
.+..+.+.+|+.++|.|.+.+ .|.+.|.|++++........ .....++.+..+
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 87 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANL 87 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCT
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccC
Confidence 345678899999999999987 88899999997643210000 000112222111
Q ss_pred CceeeeeeEEEecCCCCCCeEEEEEEecCCCce-----eEEEEEEE
Q psy1672 313 GEYERKSSLVLTNAQESDSGRFYCVAENRAGIA-----DANFTLQV 353 (600)
Q Consensus 313 g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~-----~~~v~L~V 353 (600)
+ ...|.|.+++.+|.|.|+|.|.|..+.. .+.+.|.|
T Consensus 88 ~----~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V 129 (250)
T 2fbo_J 88 A----APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKV 129 (250)
T ss_dssp T----SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEE
T ss_pred C----cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEE
Confidence 1 2479999999999999999999988753 44666666
No 400
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.09 E-value=2.6e-06 Score=80.67 Aligned_cols=89 Identities=18% Similarity=0.299 Sum_probs=59.1
Q ss_pred cccccccccccccccccceeeeEeec-CCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDS-IPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g-~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+...+....+..|+.++|.|.+.| .|++ .|.|+++|+.+...... ........++.+...+.|.|.++...|.|
T Consensus 112 P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~--~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 189 (210)
T 1lk3_L 112 PTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLD--SVTDQDSKDSTYSMSSTLSLTKADYESHN 189 (210)
T ss_dssp CEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEE--EECCCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred CeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceE--ccCCccCCCCCEEEEEEEEEChHHhccCC
Confidence 44433333333447899999999997 4544 89999999887643000 00011112344445678999999999999
Q ss_pred EEEEEEecCCCce
Q psy1672 333 RFYCVAENRAGIA 345 (600)
Q Consensus 333 ~Y~C~a~N~~G~~ 345 (600)
.|+|.|.|.....
T Consensus 190 ~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 190 LYTCEVVHKTSSS 202 (210)
T ss_dssp EEEEEEECTTCSS
T ss_pred cEEEEEEecCCCC
Confidence 9999999987644
No 401
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.08 E-value=3.9e-06 Score=80.09 Aligned_cols=81 Identities=17% Similarity=0.254 Sum_probs=58.5
Q ss_pred cccccce-eeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCc
Q psy1672 267 VSSENAT-VVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGI 344 (600)
Q Consensus 267 ~~G~~v~-L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~ 344 (600)
..|+.+. |.|.+. +.|.|.|.|++++....... ......++.+...+.|.|.++...|.|.|+|.|.|..+.
T Consensus 128 ~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~------~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~ 201 (221)
T 3eow_R 128 LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTS------QVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFE 201 (221)
T ss_dssp CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCE------EECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSS
T ss_pred cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccc------eeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCC
Confidence 5678885 999988 89999999998643322111 111122344445678999999999999999999999988
Q ss_pred eeEEEEEEE
Q psy1672 345 ADANFTLQV 353 (600)
Q Consensus 345 ~~~~v~L~V 353 (600)
....+.+.+
T Consensus 202 ~~~~~~v~~ 210 (221)
T 3eow_R 202 KPQLLTVSL 210 (221)
T ss_dssp SCEEEEECC
T ss_pred CCeEEEEEE
Confidence 776665554
No 402
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.08 E-value=5.3e-06 Score=78.48 Aligned_cols=92 Identities=13% Similarity=0.236 Sum_probs=61.1
Q ss_pred cccccccccccccceeeeEeecCCCCeeEEEEcC--eecc---C-C--cccCccceEEEeeCCceeeeeeEEEecCCCCC
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RLLL---N-N--TAFSSYQRIFVIEQGEYERKSSLVLTNAQESD 330 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~l~---~-~--~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d 330 (600)
..+..+.+..|+.++|.|.+.+.|.+.|.|++++ ..+. . . .......++.+...+ ....|.|.+++.+|
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 6 QSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG---TDFTLSINSVETED 82 (213)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET---TEEEEEESSCCGGG
T ss_pred eCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCC---CEEEEEECCCChhh
Confidence 3456778899999999999999998999999843 2110 0 0 000001233332221 23489999999999
Q ss_pred CeEEEEEEecCCCcee-EEEEEEE
Q psy1672 331 SGRFYCVAENRAGIAD-ANFTLQV 353 (600)
Q Consensus 331 ~G~Y~C~a~N~~G~~~-~~v~L~V 353 (600)
.|.|+|.|.|..|... ..+.|.|
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEI 106 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEE
T ss_pred CEEEEEeeecCCcceeCCCEEEEE
Confidence 9999999999887532 2235555
No 403
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.08 E-value=1.1e-05 Score=75.68 Aligned_cols=77 Identities=17% Similarity=0.274 Sum_probs=53.2
Q ss_pred cccccceeeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEEeeC-CceeeeeeEEEecCCCCCCeEEEEEEecCCCc
Q psy1672 267 VSSENATVVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQ-GEYERKSSLVLTNAQESDSGRFYCVAENRAGI 344 (600)
Q Consensus 267 ~~G~~v~L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~-g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~ 344 (600)
..|+.+.|.|.+. |.|.|.|.|+++|+.+.... .+.....+ +.+...+ +..++..|.|.|+|.|.|..|.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~-----~~~~~~~~~~~~~~~~---~~~v~~~d~g~Y~C~a~n~~~~ 190 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAIN-----TTVSQDPETELYAVSS---KLDFNMTTNHSFMCLIKYGHLR 190 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEECCSE-----EEEEECTTTCCEEEEE---EEEEETTSCEEEEEEEEETTCC
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECcccc-----ceEEecCCCcEEEEEE---EEEEEecCCCEEEEEEecCcce
Confidence 4588899999995 99999999999998776432 11222222 2122112 2344568999999999999998
Q ss_pred eeEEEEE
Q psy1672 345 ADANFTL 351 (600)
Q Consensus 345 ~~~~v~L 351 (600)
.++.+.+
T Consensus 191 ~s~~~~~ 197 (201)
T 1dr9_A 191 VNQTFNW 197 (201)
T ss_dssp EEEEEEE
T ss_pred eeeEEec
Confidence 8876654
No 404
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.08 E-value=2.8e-06 Score=80.72 Aligned_cols=91 Identities=20% Similarity=0.332 Sum_probs=58.1
Q ss_pred cccccccccccccccccceeeeEeec-CCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDS-IPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g-~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+........+..|+.++|.|.+.+ .|.+ .|.|+++|+.+...... ......++.+...+.|.|......|.|
T Consensus 122 P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~----~~~~~~~~~~~~~s~l~i~~~~~~d~g 197 (218)
T 3s96_B 122 PTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDT----SNPTKEGNKFMASSFLHLTSDQWRSHN 197 (218)
T ss_dssp CEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC------------------CEEEEEEEEEEHHHHHTCS
T ss_pred ceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceec----CcccccCCcEEEEEEEEEeHHHccCCC
Confidence 33333333344456789999999997 5666 89999999887643210 011112444444567889998888999
Q ss_pred EEEEEEecCCCceeEEE
Q psy1672 333 RFYCVAENRAGIADANF 349 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v 349 (600)
.|+|.|.|..+...+.+
T Consensus 198 ~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 198 SFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp CEEEEEEETTEEEEEEE
T ss_pred eEEEEEEeCCCcccccc
Confidence 99999999987665543
No 405
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.07 E-value=7.4e-06 Score=76.96 Aligned_cols=88 Identities=14% Similarity=0.205 Sum_probs=60.9
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcc--c-----------CccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTA--F-----------SSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~--~-----------~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
....+.+|+.++|.|.+.+.+.+.+.|++++........ + ....+..+..+ +.|.|.+++.
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~------~~L~i~~v~~ 80 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSN------GSLLFQMITM 80 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTT------SCEEECSCCG
T ss_pred ccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecC------CeEEEccccc
Confidence 345678999999999988888999999986532211100 0 00112222222 3799999999
Q ss_pred CCCeEEEEEEecCC-CceeEEEEEEEEE
Q psy1672 329 SDSGRFYCVAENRA-GIADANFTLQVTY 355 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~-G~~~~~v~L~V~~ 355 (600)
.|+|.|+|.+.|.. +.....+.|.|..
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (208)
T 3r4d_A 81 KDMGVYTLDMTDENYRRTQATVRFHVHQ 108 (208)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEEEC
T ss_pred cCCeEEEEEEEcccCceeEEEEEEEecc
Confidence 99999999999985 5556667777753
No 406
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.07 E-value=4e-06 Score=80.31 Aligned_cols=89 Identities=18% Similarity=0.208 Sum_probs=61.5
Q ss_pred ccccccccccccc--ccccccceeeeEeecC---CC-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecC
Q psy1672 253 CKPEIRMDSRYVE--AVSSENATVVCRVDSI---PP-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA 326 (600)
Q Consensus 253 C~p~i~~~~~~~~--v~~G~~v~L~C~v~g~---P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v 326 (600)
..|.+...+.... +..|+.++|.|.+.|. |. +.|.|++++..+.... ........++.+...+.|.|.++
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~----~~~~~~~~~~~~~~~~~L~I~~~ 83 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQ----TQTHREDYNSTIRVVSTLPIQHQ 83 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCE----EEEEEETTTTEEEEEEEEECCHH
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcc----cccccccCCCeEEEEEEEEEcHH
Confidence 3455544444444 7899999999999977 33 7999999887654321 00111122334445578999999
Q ss_pred CCCCCeEEEEEEecCCCce
Q psy1672 327 QESDSGRFYCVAENRAGIA 345 (600)
Q Consensus 327 ~~~d~G~Y~C~a~N~~G~~ 345 (600)
+..|.|.|+|.|.|..+..
T Consensus 84 ~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 84 DWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HHHTTCCEEEEEEETTCSS
T ss_pred HcCCCCeEEEEEECCcCCC
Confidence 9999999999999998754
No 407
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.07 E-value=3.7e-06 Score=80.42 Aligned_cols=91 Identities=22% Similarity=0.309 Sum_probs=64.3
Q ss_pred ccccccccccccceeeeEeecCCC-CeeEEEEcCeecc-----CCcccC--ccceEE----------EeeCCceeeeeeE
Q psy1672 260 DSRYVEAVSSENATVVCRVDSIPP-AAISWYWNGRLLL-----NNTAFS--SYQRIF----------VIEQGEYERKSSL 321 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~P~-p~i~W~~~g~~l~-----~~~~~~--~~~~~~----------~~~~g~~~~~s~L 321 (600)
.+..+.+..|+.+.|.|.+.+.+. +.+.|+++++... ...... ...++. +..+ +.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~------~~L 79 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ------GRL 79 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT------CCE
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC------ceE
Confidence 456778899999999999999885 8999998553211 000000 011111 2222 359
Q ss_pred EEecCCCCCCeEEEEEEecCC-CceeEEEEEEEEEc
Q psy1672 322 VLTNAQESDSGRFYCVAENRA-GIADANFTLQVTYR 356 (600)
Q Consensus 322 ~I~~v~~~d~G~Y~C~a~N~~-G~~~~~v~L~V~~~ 356 (600)
.|.+++..|.|.|+|.|.|.. |..+..+.|.|...
T Consensus 80 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 115 (231)
T 2pet_A 80 VLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAK 115 (231)
T ss_dssp EESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBC
T ss_pred EEcccCcccCceEEEEEEecCCCceEEEEEEEEEec
Confidence 999999999999999999997 77788888888654
No 408
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.06 E-value=1.2e-05 Score=92.36 Aligned_cols=98 Identities=24% Similarity=0.427 Sum_probs=72.4
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+........+..|+.+.|.|.+.|.|.+.+.|+++|..+.....+.. ......++ ...+.|.|.+++..|.|.|
T Consensus 430 p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~--~~~~~~~~--~~~~~L~i~~v~~~d~G~Y 505 (816)
T 3dmk_A 430 PVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQV--GQYVTVNG--DVVSYLNITSVHANDGGLY 505 (816)
T ss_dssp CEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEE--EEEECTTS--CEEEEEEESSCCTTTCEEE
T ss_pred CceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCccc--ccEEecCC--CcEEEEEEeeccccCCEEE
Confidence 3333334455678899999999999999999999999988765432110 11112222 2345799999999999999
Q ss_pred EEEEecCCCceeEEEEEEEEEc
Q psy1672 335 YCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 335 ~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
+|.|.|..|.....+.|.|...
T Consensus 506 ~C~a~n~~g~~~~~~~l~V~~~ 527 (816)
T 3dmk_A 506 KCIAKSKVGVAEHSAKLNVYGL 527 (816)
T ss_dssp EEEEEETTEEEEEEEEEEECSS
T ss_pred EEEEEECCCeEEEEEEEEEecC
Confidence 9999999999988888888543
No 409
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.06 E-value=5.1e-06 Score=76.51 Aligned_cols=85 Identities=20% Similarity=0.210 Sum_probs=59.9
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcc-----cC-ccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTA-----FS-SYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~-----~~-~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
.+.+..|+.++|.|.+.+ |.+.|.|++++..+..... ++ ...|+.+.. ..++|.|.+++..|+|.|+|
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~-----~~~sL~I~~v~~~DsG~Y~C 77 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDT-----VSGSLTIYNLTSSDEDEYEM 77 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECT-----TTCCEEECSCCGGGCEEEEE
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeC-----CCCeEEECCCChhhCceEEE
Confidence 456788999999999854 8889999997764321100 00 011232211 12489999999999999999
Q ss_pred EEecCCCceeEEEEEEEEE
Q psy1672 337 VAENRAGIADANFTLQVTY 355 (600)
Q Consensus 337 ~a~N~~G~~~~~v~L~V~~ 355 (600)
.|.|..| ...+.|.|..
T Consensus 78 ~~~n~~~--~~~~~L~V~~ 94 (171)
T 1ccz_A 78 ESPNITD--TMKFFLYVLE 94 (171)
T ss_dssp ECTTCCS--CEEEEEEEEC
T ss_pred EEeCCCC--cEEEEEEEEC
Confidence 9999988 6677777754
No 410
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.06 E-value=3.1e-06 Score=81.31 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=58.8
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeee--eEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKS--SLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s--~L~I~~v~~~d~G 332 (600)
|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+++|..+.... .+. ... ...+ .|.|.+++.+|+|
T Consensus 10 P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~-----~~~--~~~---~~~~~~~L~I~~v~~~D~G 77 (218)
T 1uct_A 10 PFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREI-----GRR--LKF---WNETDPEFVIDHMDANKAG 77 (218)
T ss_dssp CCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEEC-----SEE--CC-------CCCEEEECSCCGGGCE
T ss_pred CEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccc-----ccc--CCC---CcceeeEEEEcccccccCE
Confidence 44444444 46789999999999987 678999999876543211 000 000 1123 7999999999999
Q ss_pred EEEEEEecCCCcee--EEEEEEE
Q psy1672 333 RFYCVAENRAGIAD--ANFTLQV 353 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~--~~v~L~V 353 (600)
.|+|.|.|..|... ..+.|.|
T Consensus 78 ~Y~C~a~n~~~~~~~s~~~~l~V 100 (218)
T 1uct_A 78 RYQCQYRIGHYRFRYSDTLELVV 100 (218)
T ss_dssp EEEEEEEETTTEEEECCCEEEEE
T ss_pred EEEEEEEcCCCceeecCCEEEEE
Confidence 99999999876433 3345555
No 411
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.06 E-value=2.1e-05 Score=79.05 Aligned_cols=70 Identities=19% Similarity=0.354 Sum_probs=55.9
Q ss_pred ccccccccceeeeEe------ecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEE
Q psy1672 264 VEAVSSENATVVCRV------DSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCV 337 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v------~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~ 337 (600)
..+..|+.+.|.|.+ .|.|.+.+.|+++++.+.... .+. ...+ +.|.|.+++..|.|.|+|.
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~-----~~~-~~~~------~~L~i~~v~~~d~G~Y~C~ 180 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN-----IHF-SGVK------DRLIVMNVAEKHRGNYTCH 180 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCS-----SSE-EEET------TEEEESSCCGGGCEEEEEE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCcc-----ceE-eecC------ceEEEEeceehhCcEEEEE
Confidence 356789999999998 799999999999998875422 111 1122 3799999999999999999
Q ss_pred Ee-cCCCce
Q psy1672 338 AE-NRAGIA 345 (600)
Q Consensus 338 a~-N~~G~~ 345 (600)
|. |..|..
T Consensus 181 a~~n~~g~~ 189 (315)
T 1itb_B 181 ASYTYLGKQ 189 (315)
T ss_dssp EEEEETTEE
T ss_pred EEcCCCCcE
Confidence 99 888876
No 412
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.06 E-value=5e-06 Score=77.60 Aligned_cols=88 Identities=11% Similarity=0.109 Sum_probs=63.3
Q ss_pred ccccccccccceeeeEee--cCCCCeeEEEE--cCeeccCCc----ccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 262 RYVEAVSSENATVVCRVD--SIPPAAISWYW--NGRLLLNNT----AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~--g~P~p~i~W~~--~g~~l~~~~----~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
..+.+..|+.++|.|... +.+.+.|.|++ ++..+.... .+....|..+..+| +|.|.+++..|+|.
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng------sL~I~~v~~~DsG~ 80 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG------TLKIKHLKTDDQDI 80 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS------CEEECSCCGGGCEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC------CEEECCCChhhCEE
Confidence 456678899999999553 35567999999 877653111 01123455555554 89999999999999
Q ss_pred EEEEEecCCCcee--EEEEEEEEE
Q psy1672 334 FYCVAENRAGIAD--ANFTLQVTY 355 (600)
Q Consensus 334 Y~C~a~N~~G~~~--~~v~L~V~~ 355 (600)
|+|.|.|..|... +.+.|.|..
T Consensus 81 Y~c~~~n~~g~~~~~~~~~L~V~~ 104 (182)
T 1hnf_A 81 YKVSIYDTKGKNVLEKIFDLKIQE 104 (182)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEEC
T ss_pred EEEEEEeCCCceeEEEEEEEEEcC
Confidence 9999999998764 456677753
No 413
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.06 E-value=6.5e-06 Score=83.64 Aligned_cols=100 Identities=20% Similarity=0.386 Sum_probs=65.3
Q ss_pred cccccccccccccccceeeeEeecC-CCCeeEEEEcCeeccCC---cccCccceEEEeeCCce--eeeeeEEEecCCCCC
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSI-PPAAISWYWNGRLLLNN---TAFSSYQRIFVIEQGEY--ERKSSLVLTNAQESD 330 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~~l~~~---~~~~~~~~~~~~~~g~~--~~~s~L~I~~v~~~d 330 (600)
+...+..+.+.+|+.+.|.|.+.+. |.+.|.|++++...... .......++....+... ...+.|.|.+++.+|
T Consensus 6 v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D 85 (327)
T 2wng_A 6 VIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPAD 85 (327)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGG
T ss_pred EEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcccc
Confidence 3444667889999999999999987 88999999987532100 00001123333222110 234579999999999
Q ss_pred CeEEEEEEecCCCcee-----EEEEEEEEEc
Q psy1672 331 SGRFYCVAENRAGIAD-----ANFTLQVTYR 356 (600)
Q Consensus 331 ~G~Y~C~a~N~~G~~~-----~~v~L~V~~~ 356 (600)
.|.|+|.|.|..|... ..+.|.|...
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~ 116 (327)
T 2wng_A 86 AGTYYCVKFRKGSPDTEFKSGAGTELSVRAK 116 (327)
T ss_dssp CEEEEEEEEESSTTCEEEEECCCEEEEEEBC
T ss_pred CeEEEEEeecCCCcceeEeecCcEEEEEEec
Confidence 9999999999877522 2345666443
No 414
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.05 E-value=2.6e-06 Score=81.26 Aligned_cols=80 Identities=16% Similarity=0.268 Sum_probs=55.0
Q ss_pred ccccccccceeeeEeec-CCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 264 VEAVSSENATVVCRVDS-IPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g-~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+..|+.++|.|.+.| .|.| .|.|++++..+.... .... ...+.+...+.|.|.... .|.|.|+|.|.|.
T Consensus 134 ~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~----~~~~--~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~ 206 (219)
T 1c1e_H 134 SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT----FPAV--LQSDLYTLSSSVTVPSSP-RPSETVTCNVAHP 206 (219)
T ss_dssp SSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE----CCCE--ESSSCEEEEEEEEEESSS-TTTSCCEEEEEEG
T ss_pred cccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEe----cCCc--ccCCeEEEEEEEEEeccc-CCCCEEEEEEEeC
Confidence 34568999999999998 8988 999999887543111 1111 122444455678884444 4669999999999
Q ss_pred CCceeEEEE
Q psy1672 342 AGIADANFT 350 (600)
Q Consensus 342 ~G~~~~~v~ 350 (600)
.|.......
T Consensus 207 ~~~~~~~~~ 215 (219)
T 1c1e_H 207 ASSTKVDKK 215 (219)
T ss_dssp GGTEEEEEE
T ss_pred CCCccEEEe
Confidence 887654443
No 415
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.05 E-value=8.8e-06 Score=70.29 Aligned_cols=82 Identities=21% Similarity=0.321 Sum_probs=55.6
Q ss_pred ccccccccccccccceeeeEeecCCCCeeEEEEc--Cee---cc-CCcc--cCccceEEEeeCCceeeeeeEEEecCCCC
Q psy1672 258 RMDSRYVEAVSSENATVVCRVDSIPPAAISWYWN--GRL---LL-NNTA--FSSYQRIFVIEQGEYERKSSLVLTNAQES 329 (600)
Q Consensus 258 ~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~---l~-~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~v~~~ 329 (600)
...+..+.+.+|+.++|.|.+.+.+.+.+.|++. +.. +. .... .....|+.+... .....|+|.+++.+
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~---~~~~~L~I~~v~~~ 81 (120)
T 1mqk_L 5 TQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGS---GTQFSLKINSLLPE 81 (120)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE---TTEEEEEESSCCGG
T ss_pred EecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEecc---CCEEEEEECCCCHH
Confidence 3345678889999999999999888889999994 221 11 0000 001223333221 12457999999999
Q ss_pred CCeEEEEEEecCC
Q psy1672 330 DSGRFYCVAENRA 342 (600)
Q Consensus 330 d~G~Y~C~a~N~~ 342 (600)
|+|.|.|.+.|..
T Consensus 82 DsG~Y~C~~~~~~ 94 (120)
T 1mqk_L 82 DFGSYYCQHHYGT 94 (120)
T ss_dssp GCEEEEEEECSSS
T ss_pred HCEEEEEEEEeCC
Confidence 9999999999863
No 416
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.04 E-value=7.1e-06 Score=77.44 Aligned_cols=85 Identities=19% Similarity=0.167 Sum_probs=58.0
Q ss_pred cccccccccceeeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 263 YVEAVSSENATVVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
......++.+.+.|.+. +.|++.+.|++++....... ......++.....+.|.|.++...|.|.|+|.|+|.
T Consensus 130 ~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~------~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~ 203 (225)
T 4fmk_A 130 EVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDT------QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHE 203 (225)
T ss_dssp CBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEE------EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECT
T ss_pred ceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCc------ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcC
Confidence 34445566666766554 78888999998765443211 122233455555678999999999999999999999
Q ss_pred CCceeEEEEEEE
Q psy1672 342 AGIADANFTLQV 353 (600)
Q Consensus 342 ~G~~~~~v~L~V 353 (600)
.|.......+.+
T Consensus 204 ~~~~~~~~~v~l 215 (225)
T 4fmk_A 204 SFEEPILLPVTL 215 (225)
T ss_dssp TCSSCEEEEEEC
T ss_pred CCCeEEEEEEEE
Confidence 987755544433
No 417
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.04 E-value=1e-05 Score=78.57 Aligned_cols=88 Identities=20% Similarity=0.335 Sum_probs=54.3
Q ss_pred ccccccceeeeEeec-CCCC-eeEEEEcCeeccCCcccCcc---ceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 266 AVSSENATVVCRVDS-IPPA-AISWYWNGRLLLNNTAFSSY---QRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 266 v~~G~~v~L~C~v~g-~P~p-~i~W~~~g~~l~~~~~~~~~---~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+..|+.+.|.|.+.| .|.+ .|.|+++++.+......... .......++.+...+.|.|......|.|.|+|.|.|
T Consensus 130 ~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n 209 (248)
T 3pv7_A 130 GMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRH 209 (248)
T ss_dssp ------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEEC
T ss_pred cccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEEC
Confidence 446788899999998 7888 99999988655422111000 112223345555667899999999999999999999
Q ss_pred CCCce--eEEEEEEE
Q psy1672 341 RAGIA--DANFTLQV 353 (600)
Q Consensus 341 ~~G~~--~~~v~L~V 353 (600)
..+.. +..+.|.|
T Consensus 210 ~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 210 ASLHTPLRSNFTLTA 224 (248)
T ss_dssp TTCSSCEEEEECC--
T ss_pred CCCCCCcEEEEEEEE
Confidence 99874 44555555
No 418
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.03 E-value=1.8e-06 Score=89.80 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=77.9
Q ss_pred CCCCccEEEeecccCcccCccccCCCCCccEEEccCCCCCCCCcccc--CCCCCCCEEEccC--CC------CCccCccc
Q psy1672 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTF--QSVRFLRDLNLAR--NP------ISKIEKGA 142 (600)
Q Consensus 73 ~l~~L~~L~L~~n~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~f--~~l~~L~~L~Ls~--N~------i~~l~~~~ 142 (600)
.+++|+.|.|++|.-..+.+ +. +++|++|+|..+.+..-.-..+ ..+++|+.|+|+. |. +..+.. .
T Consensus 170 ~~P~L~~L~L~g~~~l~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~-~ 245 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNLSIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP-L 245 (362)
T ss_dssp TCTTCCEEEEECCBTCBCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG-G
T ss_pred cCCCCcEEEEeCCCCceecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH-H
Confidence 57788888888773123322 33 6788888888777653211112 2567788888753 11 111111 1
Q ss_pred c--cCCCCcceeeCCCCcCcccChhhh---cCCCCCCEEEcCCCcCCCCCc----ccccccccccEEEccCCcCc
Q psy1672 143 F--QFVPGLVKLDMSESRLEHISPEAF---TGAKSLESIKLNGNRLSHFPV----RSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 143 ~--~~l~~L~~L~Ls~n~l~~i~~~~~---~~l~~L~~L~Ls~N~l~~l~~----~~~~~l~~L~~L~l~~N~~~ 208 (600)
+ ..+++|+.|+|++|.+.......+ ..+++|+.|+|+.|.|..... ..+..+++|+.|++..|.+.
T Consensus 246 l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 246 FSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp SCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 2 246788888888887764222222 246788888888887775321 22345677888888777643
No 419
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=9.4e-06 Score=71.57 Aligned_cols=101 Identities=22% Similarity=0.452 Sum_probs=61.8
Q ss_pred ccccccccccccccccceeeeEeecC-CCCeeEEEEcCe----eccCCcccCccceEEEeeC--CceeeeeeEEEecCCC
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSI-PPAAISWYWNGR----LLLNNTAFSSYQRIFVIEQ--GEYERKSSLVLTNAQE 328 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~----~l~~~~~~~~~~~~~~~~~--g~~~~~s~L~I~~v~~ 328 (600)
.+...+..+.+.+|+.++|.|.+.+. +.+.+.|++.+. .+.... .....++....+ ........|+|.+++.
T Consensus 10 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~-~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 88 (136)
T 2d9c_A 10 QVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQK-EGHFPRVTTVSELTKRNNLDFSISISNITP 88 (136)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESS-SCCCSSBCCSSCSSSSSCCBCCEEESSCCT
T ss_pred EEEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcC-CCcccceeeeeeeccCCCCEEEEEECCCCH
Confidence 34444567889999999999999865 567899999642 111000 000011111100 0001246899999999
Q ss_pred CCCeEEEEEEecCCCc--ee----EEEEEEEEEcc
Q psy1672 329 SDSGRFYCVAENRAGI--AD----ANFTLQVTYRG 357 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~--~~----~~v~L~V~~~~ 357 (600)
+|+|.|.|.+.|..+. .. ..+.|.|...+
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~ 123 (136)
T 2d9c_A 89 ADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKP 123 (136)
T ss_dssp TTCEEEEEEEEECCSSSCEEEEECCCEEEEEECCC
T ss_pred HHCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCC
Confidence 9999999999986541 11 34667775543
No 420
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.03 E-value=5.5e-06 Score=78.74 Aligned_cols=78 Identities=19% Similarity=0.290 Sum_probs=55.1
Q ss_pred cccccceeeeEeec-CCCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCc
Q psy1672 267 VSSENATVVCRVDS-IPPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGI 344 (600)
Q Consensus 267 ~~G~~v~L~C~v~g-~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~ 344 (600)
..|+.++|.|.+.| .|.+ .|.|+++|+.+...... ........++.+...+.|.|..+...|.|.|+|.|.|....
T Consensus 127 ~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~--~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 127 LKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE--SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEE--EECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred ccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeE--ecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 46889999999997 4554 89999999877543100 00001112344445668999999999999999999998865
Q ss_pred ee
Q psy1672 345 AD 346 (600)
Q Consensus 345 ~~ 346 (600)
..
T Consensus 205 ~~ 206 (216)
T 2xzc_L 205 SP 206 (216)
T ss_dssp SC
T ss_pred Cc
Confidence 44
No 421
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.03 E-value=8e-06 Score=68.81 Aligned_cols=81 Identities=16% Similarity=0.329 Sum_probs=54.9
Q ss_pred ccccccccccccccceeeeEeecCCCCeeEEEEcC--ee---cc-CCcc--cCccceEEEeeCCceeeeeeEEEecCCCC
Q psy1672 258 RMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RL---LL-NNTA--FSSYQRIFVIEQGEYERKSSLVLTNAQES 329 (600)
Q Consensus 258 ~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~---l~-~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~v~~~ 329 (600)
...+..+.+.+|+.++|.|.+.+.+.+.+.|++.. .. +. .... .....|+.+...+ ....|.|.+++.+
T Consensus 5 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~ 81 (107)
T 1i8k_A 5 TQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTG---TDFVFTIENTLSE 81 (107)
T ss_dssp EEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET---TEEEEEESSCCGG
T ss_pred EeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccC---CEEEEEECCCCHH
Confidence 33456788899999999999998878899999842 21 11 0000 0011233332211 2357999999999
Q ss_pred CCeEEEEEEecC
Q psy1672 330 DSGRFYCVAENR 341 (600)
Q Consensus 330 d~G~Y~C~a~N~ 341 (600)
|+|.|.|.+.|.
T Consensus 82 DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 82 DVGDYYCLQSFN 93 (107)
T ss_dssp GCEEEEEEECSS
T ss_pred HCEEEEEEEeeC
Confidence 999999999986
No 422
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.02 E-value=6.7e-06 Score=76.31 Aligned_cols=67 Identities=15% Similarity=0.172 Sum_probs=51.5
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
...+..|+.++|.|.+.+.| +.+.|+++|..+.... . .....+.|.|.+++.+|.|.|+|.|.|..
T Consensus 102 ~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~------~-------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 167 (184)
T 2gi7_A 102 GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKN------P-------ERWYRASFPIITVTAAHSGTYRCYSFSSR 167 (184)
T ss_dssp CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCC------C-------CEEEEESSSEEEETTCCSEEEEEEEECTT
T ss_pred CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCccee------c-------CCCceEEEEEccCCccCCeEEEEEEEeCC
Confidence 44677899999999987654 6999999987665311 0 01123578999999999999999999986
Q ss_pred C
Q psy1672 343 G 343 (600)
Q Consensus 343 G 343 (600)
+
T Consensus 168 ~ 168 (184)
T 2gi7_A 168 D 168 (184)
T ss_dssp S
T ss_pred C
Confidence 5
No 423
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.02 E-value=1.2e-05 Score=78.11 Aligned_cols=94 Identities=17% Similarity=0.267 Sum_probs=61.2
Q ss_pred cccccccccccccccceeeeEeecCCCCeeEEEE--cCeeccCC------cccCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYW--NGRLLLNN------TAFSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~--~g~~l~~~------~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
+...+..+.+.+|+.++|.|.+.+.|.+.+.|++ ++..+... .......++.+...+ ....|.|.+++.
T Consensus 138 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~ 214 (247)
T 2ghw_B 138 LTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSG---TDFTLTISRLEP 214 (247)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSS---SEEEEEECSCCG
T ss_pred EEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCC---CeEEEEECcCCH
Confidence 3334556678899999999999999999999999 55433100 000011233332221 235799999999
Q ss_pred CCCeEEEEEEecCCCce-eEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGIA-DANFTLQV 353 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~-~~~v~L~V 353 (600)
+|+|.|+|.|.|..+.. .....|.|
T Consensus 215 ~D~G~Y~C~a~~~~~~~~g~~t~l~V 240 (247)
T 2ghw_B 215 EDFAVYYCQQRSNWPPTFGQGTKVEV 240 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred HHCEEEEEEEccCCCceEcCCEEEEE
Confidence 99999999999864332 22345555
No 424
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.02 E-value=8.3e-06 Score=70.37 Aligned_cols=82 Identities=17% Similarity=0.364 Sum_probs=55.5
Q ss_pred cccccccccccccccceeeeEeecCCCCeeEEEEcC--ee---cc-CCccc--CccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RL---LL-NNTAF--SSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~---l~-~~~~~--~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
+...+..+.+.+|+.++|.|.+.+.+.+.+.|++.. .. +. ..... ....++.+... .....|.|.+++.
T Consensus 6 v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~---~~~~~L~I~~v~~ 82 (119)
T 2e27_L 6 MTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGS---GRDYSFSISNLEP 82 (119)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE---TTEEEEEECSCCG
T ss_pred eEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcc---CCEEEEEECCCCh
Confidence 334466788899999999999998888899999842 21 11 00000 01123333211 1245799999999
Q ss_pred CCCeEEEEEEecC
Q psy1672 329 SDSGRFYCVAENR 341 (600)
Q Consensus 329 ~d~G~Y~C~a~N~ 341 (600)
+|+|.|.|.+.|.
T Consensus 83 ~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 83 EDAATYYCLQYDN 95 (119)
T ss_dssp GGCEEEEEEECGG
T ss_pred HHCEEEEEEEccC
Confidence 9999999999985
No 425
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.02 E-value=4.3e-06 Score=86.87 Aligned_cols=129 Identities=20% Similarity=0.194 Sum_probs=60.7
Q ss_pred ceEEEeeCCCCCCCChhhhcccCCCCccEEEeecccCcccCcccc--CCCCCccEEEccC--CC------CCCCCcccc-
Q psy1672 51 TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGAL--DGLTNLIEIDLSD--NL------LTSIPSLTF- 119 (600)
Q Consensus 51 l~~L~Ls~n~L~~l~~~~f~~~~l~~L~~L~L~~n~l~~i~~~~f--~~l~~L~~L~Ls~--N~------l~~l~~~~f- 119 (600)
|+.|+|++|.-..++. + .+++|+.|+|..|.+..-.-..+ ..+++|++|+|+. |. +..+.. .+
T Consensus 174 L~~L~L~g~~~l~l~~--~---~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~-~l~ 247 (362)
T 2ra8_A 174 LNNLKIKGTNNLSIGK--K---PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP-LFS 247 (362)
T ss_dssp CCEEEEECCBTCBCCS--C---BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG-GSC
T ss_pred CcEEEEeCCCCceecc--c---cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH-HHh
Confidence 6666666652112222 1 25566666666665533211122 2456666666642 11 111111 11
Q ss_pred -CCCCCCCEEEccCCCCCccCcccc---cCCCCcceeeCCCCcCcccChhh----hcCCCCCCEEEcCCCcCCC
Q psy1672 120 -QSVRFLRDLNLARNPISKIEKGAF---QFVPGLVKLDMSESRLEHISPEA----FTGAKSLESIKLNGNRLSH 185 (600)
Q Consensus 120 -~~l~~L~~L~Ls~N~i~~l~~~~~---~~l~~L~~L~Ls~n~l~~i~~~~----~~~l~~L~~L~Ls~N~l~~ 185 (600)
..+++|+.|+|.+|.+.......+ ..+++|+.|+|+.|.|....... +..+++|+.|+|++|.|+.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 134566666666666543111111 13556666666666665532222 2334666666666665543
No 426
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.01 E-value=8.6e-06 Score=84.46 Aligned_cols=81 Identities=19% Similarity=0.210 Sum_probs=65.2
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... . ...+.|.|.+++..|.|.|+|.|.|
T Consensus 214 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~----------~-----~~~~~L~i~~~~~~d~G~Y~C~a~n 278 (382)
T 1cs6_A 214 PADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKW----------L-----SSEPLLHIQNVDFEDEGTYECEAEN 278 (382)
T ss_dssp CSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCCC----------S-----BSSSEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccEE----------e-----cCCcEEEEccCChhhCEEEEEEEEc
Confidence 345667889999999999999999999999776543210 0 1124799999999999999999999
Q ss_pred CCCceeEEEEEEEEEc
Q psy1672 341 RAGIADANFTLQVTYR 356 (600)
Q Consensus 341 ~~G~~~~~v~L~V~~~ 356 (600)
..|.....+.|.|...
T Consensus 279 ~~g~~~~~~~l~V~~~ 294 (382)
T 1cs6_A 279 IKGRDTYQGRIIIHAQ 294 (382)
T ss_dssp TTEEEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEecC
Confidence 9999888888888654
No 427
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.01 E-value=1.2e-05 Score=67.88 Aligned_cols=87 Identities=23% Similarity=0.387 Sum_probs=57.8
Q ss_pred ccccccccccceeeeEe-ecCCCCeeEEEEc-CeeccC----Cc--cc-Cc-cceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 262 RYVEAVSSENATVVCRV-DSIPPAAISWYWN-GRLLLN----NT--AF-SS-YQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v-~g~P~p~i~W~~~-g~~l~~----~~--~~-~~-~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
..+.+..|+.++|.|.+ .+.+.+.+.|++. ++.+.. .. .. .. ..|+.+.. ....|+|.+++.+|+
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~-----~~~sL~I~~v~~~Ds 85 (110)
T 2ptt_A 11 PDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEE-----NNGALHISNVRKEDK 85 (110)
T ss_dssp CSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECT-----TTCCEEESSCCGGGC
T ss_pred CCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeC-----CCccEEECCCCcccC
Confidence 45678899999999998 5677789999993 221110 00 00 00 12333321 235799999999999
Q ss_pred eEEEEEEecCCCceeEEEEEEEE
Q psy1672 332 GRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
|.|.|.+.+.. .....+.|.|.
T Consensus 86 G~Y~C~v~~~~-~~~~~~~L~V~ 107 (110)
T 2ptt_A 86 GTYYMRVLRET-ENELKITLEVF 107 (110)
T ss_dssp EEEEEEEESSS-BCCEEEEEEEE
T ss_pred eEEEEEEEcCC-CcEEEEEEEEE
Confidence 99999999876 34456666664
No 428
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.01 E-value=1.1e-05 Score=76.22 Aligned_cols=89 Identities=17% Similarity=0.127 Sum_probs=59.8
Q ss_pred ccccccccceeeeEeecCCC---CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEec
Q psy1672 264 VEAVSSENATVVCRVDSIPP---AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~---p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N 340 (600)
..+..|+.++|.|.+.+.++ ++|.|+++++.+........ . .........+.|.|......|.|.|+|.|+|
T Consensus 101 ~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~-~----~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n 175 (202)
T 1vca_A 101 GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLED-A----DRKSLETKSLEVTFTPVIEDIGKVLVCRAKL 175 (202)
T ss_dssp SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSC-C----SSCCCEEEEEEEEECCCGGGTTCEEEEEEEE
T ss_pred eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccc-c----CcCcceEEEEEEEEEeeeccCCCeEEEEEEc
Confidence 55788999999999997643 37899999987653211000 0 0000122344677888888889999999999
Q ss_pred CCCc-------eeEEEEEEEEEcc
Q psy1672 341 RAGI-------ADANFTLQVTYRG 357 (600)
Q Consensus 341 ~~G~-------~~~~v~L~V~~~~ 357 (600)
..|. .+..+.|.|.+.|
T Consensus 176 ~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 176 HIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp CSCCCTTSCSEEEEEEECCEECCC
T ss_pred cccCCCCcceeEeeEEEEEEecCC
Confidence 9876 3456777776543
No 429
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.01 E-value=5.7e-06 Score=77.02 Aligned_cols=78 Identities=18% Similarity=0.340 Sum_probs=58.9
Q ss_pred cccccccccccceeeeE-eecCCC-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 261 SRYVEAVSSENATVVCR-VDSIPP-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~-v~g~P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
+..+.+.+|+.+.|.|. +.+.|. +.+.|++++..+.... ..+...... .+.|.|.+++..|.|.|+|.+
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~----~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~~ 85 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITM----DKRRFVSQT-----NGNLYIANVEASDKGNYSCFV 85 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCC----SSSEEECTT-----TCCEEESSCCGGGCEEEEEEE
T ss_pred CceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeee----CCCeEEEcC-----CCeEEECcCCcccCeEEEEEE
Confidence 45677889999999999 888998 9999999887654211 112222222 247999999999999999999
Q ss_pred ecCCCceeE
Q psy1672 339 ENRAGIADA 347 (600)
Q Consensus 339 ~N~~G~~~~ 347 (600)
.|..+....
T Consensus 86 ~~~~~~~~~ 94 (201)
T 3s97_C 86 SSPSITKSV 94 (201)
T ss_dssp EEGGGTEEE
T ss_pred EecCCCcch
Confidence 998766543
No 430
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.00 E-value=1e-05 Score=83.49 Aligned_cols=93 Identities=13% Similarity=0.039 Sum_probs=65.3
Q ss_pred ccccccccccceeeeEeec-----CCCCeeEEEEcCeeccCCcc-cC-ccceEEEeeCC--c-----eeeeeeEEEecCC
Q psy1672 262 RYVEAVSSENATVVCRVDS-----IPPAAISWYWNGRLLLNNTA-FS-SYQRIFVIEQG--E-----YERKSSLVLTNAQ 327 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g-----~P~p~i~W~~~g~~l~~~~~-~~-~~~~~~~~~~g--~-----~~~~s~L~I~~v~ 327 (600)
....+.+|+.+.|.|.+.+ .|.|.+.|+++|..+..... +. ...+..+.... . ......|.|.+++
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 263 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQAL 263 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBC
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCC
Confidence 4456778999999998877 78899999999876654100 00 01122221100 0 0012479999999
Q ss_pred CCCCeEEEEEEecC--CCceeEEEEEEEE
Q psy1672 328 ESDSGRFYCVAENR--AGIADANFTLQVT 354 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~--~G~~~~~v~L~V~ 354 (600)
..|.|.|+|.|.|. .|..+..+.|.|.
T Consensus 264 ~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 264 PQYAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp GGGCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred cCcCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 99999999999999 9998888888885
No 431
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.00 E-value=9e-06 Score=71.21 Aligned_cols=99 Identities=21% Similarity=0.274 Sum_probs=64.6
Q ss_pred cccccccccccccceeeeEeecCC-CCeeEEEEc--Cee---c-cCCc---ccCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIP-PAAISWYWN--GRL---L-LNNT---AFSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P-~p~i~W~~~--g~~---l-~~~~---~~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
..+..+.+.+|+.++|.|.+.+.. ...+.|++. ++. + .... ......|+.+..+. ......|+|.+++.
T Consensus 6 Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~-~~~~~sL~I~~~~~ 84 (129)
T 3rrq_A 6 FSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLP-NGRDFHMSVVRARR 84 (129)
T ss_dssp EECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECT-TSSEEEEEESSCCG
T ss_pred ECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcC-CCCEEEEEECCCCh
Confidence 345678889999999999998654 467999983 221 1 1000 00112344443221 12346899999999
Q ss_pred CCCeEEEEEEecCCCce----eEEEEEEEEEccC
Q psy1672 329 SDSGRFYCVAENRAGIA----DANFTLQVTYRGV 358 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~----~~~v~L~V~~~~~ 358 (600)
+|+|.|.|.+.|..+.. ...+.|.|+.++.
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~~ 118 (129)
T 3rrq_A 85 NDSGTYLCGAISLAPKLQIKESLRAELRVTERRA 118 (129)
T ss_dssp GGCEEEEEEEEECGGGCEEEECCCEEEEEECCCC
T ss_pred hHCEEEEEEEEecCCCceeeEeceEEEEEecCcc
Confidence 99999999999987765 4457888876543
No 432
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.00 E-value=1e-05 Score=76.52 Aligned_cols=90 Identities=16% Similarity=0.286 Sum_probs=59.9
Q ss_pred cccccccccccceeeeEeecCCCCeeEEEEc--Ceecc---C-Cc--ccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWN--GRLLL---N-NT--AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~l~---~-~~--~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
+..+.+..|+.++|.|.+.+.|.+.|.|+++ +..+. . .. ......++.+...+ ....|.|.+++.+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~~D~G 83 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSG---TDFTLTIDPVEADDTA 83 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCCGGGCE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecC---CEEEEEECCCCHHHCe
Confidence 6677889999999999999998899999984 22210 0 00 00001233322211 2348999999999999
Q ss_pred EEEEEEecCCCcee-EEEEEEE
Q psy1672 333 RFYCVAENRAGIAD-ANFTLQV 353 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~-~~v~L~V 353 (600)
.|+|.|.|..+... ..+.|.|
T Consensus 84 ~Y~C~~~~~~~~~~~~~~~l~V 105 (210)
T 1lk3_L 84 IYFCQQSWNGPLTFGAGTKLEL 105 (210)
T ss_dssp EEEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEEEcCCCceeCCCEEEEE
Confidence 99999999877532 2234555
No 433
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.00 E-value=3.8e-06 Score=79.52 Aligned_cols=78 Identities=15% Similarity=0.262 Sum_probs=56.5
Q ss_pred ccccccccceeeeEeecC-CCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 264 VEAVSSENATVVCRVDSI-PPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+..|+.++|.|.+.|. |.| .+.|++++..+.... .... ..++.+...+.|.|.++...| |.|+|.|.|.
T Consensus 128 ~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~----~~~~--~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~ 200 (210)
T 3d9a_H 128 SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT----FPAV--LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHP 200 (210)
T ss_dssp TSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE----CCCE--EETTEEEEEEEEEEEGGGTTT-SCCEEEEEEG
T ss_pred cccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE----cCCc--cCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeC
Confidence 445689999999999986 888 999999886542111 1111 123444456789999988867 9999999999
Q ss_pred CCceeEE
Q psy1672 342 AGIADAN 348 (600)
Q Consensus 342 ~G~~~~~ 348 (600)
.|.....
T Consensus 201 ~~~~~~~ 207 (210)
T 3d9a_H 201 ASSTKVD 207 (210)
T ss_dssp GGTEEEE
T ss_pred CCCcccc
Confidence 9886543
No 434
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.00 E-value=1.4e-05 Score=77.72 Aligned_cols=96 Identities=19% Similarity=0.305 Sum_probs=63.2
Q ss_pred cccccccccccceeeeEeecCCCCe-----eEEEEcCeeccCCc-ccC-ccceEEEeeCCc-------eeeeeeEEEecC
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAA-----ISWYWNGRLLLNNT-AFS-SYQRIFVIEQGE-------YERKSSLVLTNA 326 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~-----i~W~~~g~~l~~~~-~~~-~~~~~~~~~~g~-------~~~~s~L~I~~v 326 (600)
+..+.+..|+.++|.|.+.+.|.+. |.|++++....... .+. .......+..+. ......|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 4456788999999999999888776 99999532211000 000 000000111110 012346999999
Q ss_pred CCCCCeEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 327 QESDSGRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 327 ~~~d~G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
+..|.|.|+|.+.|..|.....+.|.|...
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~ 119 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVVAS 119 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEecC
Confidence 999999999999999988888888888653
No 435
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.00 E-value=1.1e-05 Score=75.60 Aligned_cols=62 Identities=18% Similarity=0.331 Sum_probs=46.2
Q ss_pred ccc-cceeeeEeecC-CCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCC-CCCeEEEEEEecCCCc
Q psy1672 268 SSE-NATVVCRVDSI-PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQE-SDSGRFYCVAENRAGI 344 (600)
Q Consensus 268 ~G~-~v~L~C~v~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~-~d~G~Y~C~a~N~~G~ 344 (600)
.|. .++|.|.+.+. |.+.|.|+++|+.+... +.|.|..... .|.|.|+|+|.|.+|.
T Consensus 122 ~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~--------------------~~l~i~~~~~~~d~G~Y~C~a~N~~g~ 181 (193)
T 2if7_A 122 NMTCELHLTCSVEDADDNVSFRWEALGNTLSSQ--------------------PNLTVSWDPRISSEQDYTCIAENAVSN 181 (193)
T ss_dssp CSSEEEEEEEEEESCCTTCEEEEEETTEEEESS--------------------SEEEEEECTTTCSCCEEEEEEEETTEE
T ss_pred CCCceEEEEEEEecCCCceEEEEEeCCEEcCCC--------------------CeEEEEeccCcCCCCcEEEEEECCCCc
Confidence 454 79999999985 57899999988754321 1455654444 4899999999999998
Q ss_pred eeEEE
Q psy1672 345 ADANF 349 (600)
Q Consensus 345 ~~~~v 349 (600)
.+..+
T Consensus 182 ~s~~~ 186 (193)
T 2if7_A 182 LSFSV 186 (193)
T ss_dssp EEEEE
T ss_pred ccccc
Confidence 76543
No 436
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.00 E-value=1.2e-05 Score=68.26 Aligned_cols=84 Identities=14% Similarity=0.340 Sum_probs=56.6
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcC--e---ecc-CCcc--cCccceEEEeeCCceeeeeeEEEecC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--R---LLL-NNTA--FSSYQRIFVIEQGEYERKSSLVLTNA 326 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~---~l~-~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~v 326 (600)
..+...+..+.+.+|+.++|.|.+.+.+.+.+.|++.. . .+. .... .....++.+... .....|+|.++
T Consensus 5 ~~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~---~~~~~L~I~~v 81 (111)
T 1i3g_L 5 IVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGS---GTDFTLTISNV 81 (111)
T ss_dssp CCEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE---TTEEEEEESSC
T ss_pred ceEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcC---CCEEEEEECCC
Confidence 34455567788999999999999988777889999843 1 111 0000 001123333221 12357999999
Q ss_pred CCCCCeEEEEEEecC
Q psy1672 327 QESDSGRFYCVAENR 341 (600)
Q Consensus 327 ~~~d~G~Y~C~a~N~ 341 (600)
+.+|+|.|.|.+.|.
T Consensus 82 ~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 82 QSEDLADYFCQQYSS 96 (111)
T ss_dssp CGGGCSEEEEEECSS
T ss_pred CHHHCEEEEEEEecC
Confidence 999999999999986
No 437
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.00 E-value=1.2e-05 Score=76.07 Aligned_cols=95 Identities=18% Similarity=0.306 Sum_probs=61.6
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcC--eec---cC--C-cccCccceEEEeeCCceeeeeeEEEecCC
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RLL---LN--N-TAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~l---~~--~-~~~~~~~~~~~~~~g~~~~~s~L~I~~v~ 327 (600)
.+...+..+.+.+|+.++|.|.+.+.|.+.+.|++.. ... .. . .......++.+...+ ....|.|.+++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~ 79 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSG---RDSSFTISSLE 79 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSCC
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccC---CEEEEEECCCC
Confidence 3344466788899999999999999999999999832 111 00 0 000011233222111 24589999999
Q ss_pred CCCCeEEEEEEecCCCce-eEEEEEEE
Q psy1672 328 ESDSGRFYCVAENRAGIA-DANFTLQV 353 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~~G~~-~~~v~L~V 353 (600)
.+|.|.|+|.|.|..+.. ...+.|.|
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 80 SEDIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp GGGCSEEEEEECSSSSCEECCCEEEEE
T ss_pred cccCEEEEEecccCCceEEcCCceEEE
Confidence 999999999999986532 33345555
No 438
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=97.99 E-value=6.4e-06 Score=69.60 Aligned_cols=79 Identities=19% Similarity=0.260 Sum_probs=52.6
Q ss_pred cccccccccccccceeeeEeecCC--CCeeEEEEcC--eeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIP--PAAISWYWNG--RLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P--~p~i~W~~~g--~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
..+..+.+.+|+.++|.|.+.+.+ .+.+.|+++. ..... ......++.+..+. ......|+|.+++.+|+|.|
T Consensus 5 q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~--~~~~~~r~~~~~~~-~~~~~~L~I~~~~~~DsG~Y 81 (108)
T 2coq_A 5 QTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQ--TISIGGRYSETVDE-GSNSASLTIRDLRVEDSGTY 81 (108)
T ss_dssp EECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEE--ECCCBTTEEEEEET-TTTEEEEEECSCCGGGCEEE
T ss_pred eCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEE--EEEeCCceEEEEcC-CCCEEEEEECCCCcccCEEE
Confidence 345667889999999999998653 5689999852 21100 00012233322110 01246899999999999999
Q ss_pred EEEEec
Q psy1672 335 YCVAEN 340 (600)
Q Consensus 335 ~C~a~N 340 (600)
.|.+.|
T Consensus 82 ~C~~~~ 87 (108)
T 2coq_A 82 KCKAYR 87 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999998
No 439
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=97.99 E-value=8.7e-06 Score=78.11 Aligned_cols=81 Identities=21% Similarity=0.231 Sum_probs=58.1
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
...+.+|+.++|.|.+.+.|.+.+.|+++|..+... ... . ...+.|.|.+++.+|+|.|+|.|.|..
T Consensus 114 ~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~--------~~~-~----~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 114 GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ--------HQS-G----EHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS--------EEE-C----SSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc--------ccC-C----CccCEEEEccCCcccCEEEEEEEEcCC
Confidence 346789999999997777788899999998765421 111 1 113579999999999999999999864
Q ss_pred C-----ceeEEEEEEEEEc
Q psy1672 343 G-----IADANFTLQVTYR 356 (600)
Q Consensus 343 G-----~~~~~v~L~V~~~ 356 (600)
+ ..+..+.|.|...
T Consensus 181 ~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 181 SPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp STTEECCCCCCEEEEEC--
T ss_pred CCCcCCCCCCcEEEEEecC
Confidence 2 2345567777543
No 440
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.99 E-value=5e-06 Score=77.51 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=54.9
Q ss_pred cccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
...+.+|+.++|.|.+.+ +.+.+.|+++|..+.. ... .. ...+.|.|.+++.+|.|.|+|.|.|..
T Consensus 107 ~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~--------~~~-~~----~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 107 GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV--------QRG-YG----KVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE--------EEE-EC----SSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc--------ccc-CC----CceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 345789999999999876 4578999998865432 011 11 123579999999999999999999865
Q ss_pred C---ceeEEEEEEE
Q psy1672 343 G---IADANFTLQV 353 (600)
Q Consensus 343 G---~~~~~v~L~V 353 (600)
. ..+..+.|.|
T Consensus 173 ~~~s~~S~~~~l~V 186 (188)
T 1oll_A 173 HAWSFPSEPVKLLV 186 (188)
T ss_dssp TEECCCCCCEEEEE
T ss_pred CcCCCCCCcEEEEe
Confidence 2 2344555655
No 441
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.99 E-value=8.4e-06 Score=69.55 Aligned_cols=80 Identities=19% Similarity=0.260 Sum_probs=53.8
Q ss_pred cccccccccccccceeeeEeecCC--CCeeEEEEc--CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIP--PAAISWYWN--GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P--~p~i~W~~~--g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
..+..+.+.+|+.++|.|.+.+.+ .+.+.|++. +..... ......|+.+..+. ......|+|.+++.+|+|.|
T Consensus 5 q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~--~~~~~~r~~~~~~~-~~~~~~L~I~~~~~~DsG~Y 81 (113)
T 1sq2_N 5 QTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEE--SISKGGRYVETVNS-GSKSFSLRINDLTVEDGGTY 81 (113)
T ss_dssp EECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCE--ECCCBTTEEEEEET-TTTEEEEEECSCCGGGCEEE
T ss_pred eCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceE--eEEeCCCEEEEEeC-CCCEEEEEECCCChhhCEEE
Confidence 345677889999999999998655 568999984 222110 00112233332211 11246899999999999999
Q ss_pred EEEEecC
Q psy1672 335 YCVAENR 341 (600)
Q Consensus 335 ~C~a~N~ 341 (600)
.|.+.|.
T Consensus 82 ~C~~~~~ 88 (113)
T 1sq2_N 82 RCGLGVA 88 (113)
T ss_dssp EEEECBT
T ss_pred EEEEEeC
Confidence 9999984
No 442
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.98 E-value=1.1e-05 Score=75.19 Aligned_cols=88 Identities=15% Similarity=0.257 Sum_probs=59.3
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+.. .+..|+.++|.|.+.+ +.+.+.|+++|..+..... +. ......+.|.|.+++..|.|.|
T Consensus 5 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-----~~-----~~~~~~~~L~I~~v~~~D~G~Y 72 (188)
T 1oll_A 5 PFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-----KP-----PERINKVKFYIPDMNSRMAGQY 72 (188)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-----SS-----CTTCCEEEEEESSCCGGGCEEE
T ss_pred CEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCccccccc-----cc-----CCCcceeEEEeCcCCcccCeEE
Confidence 344444444 6789999999999975 3578999999876532100 00 0011235799999999999999
Q ss_pred EEEEecCCCce--eEEEEEEEE
Q psy1672 335 YCVAENRAGIA--DANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~G~~--~~~v~L~V~ 354 (600)
+|.|.|..|.. +..+.|.|.
T Consensus 73 ~C~~~~~~~~~~~s~~~~l~V~ 94 (188)
T 1oll_A 73 SCIYRVGELWSEPSNLLDLVVT 94 (188)
T ss_dssp EEEEEETTEECCCCCCEEEEEE
T ss_pred EEEecCCCCCCCCCCceEEEec
Confidence 99999976532 344566654
No 443
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.98 E-value=9.3e-06 Score=78.42 Aligned_cols=94 Identities=15% Similarity=0.258 Sum_probs=61.8
Q ss_pred cccccccccccccccceeeeEeecCC----CCeeEEEEc--Ceecc---C-Cc--ccCccceEEEeeCCceeeeeeEEEe
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIP----PAAISWYWN--GRLLL---N-NT--AFSSYQRIFVIEQGEYERKSSLVLT 324 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P----~p~i~W~~~--g~~l~---~-~~--~~~~~~~~~~~~~g~~~~~s~L~I~ 324 (600)
+...+..+.+.+|+.++|.|.+.+.| .+.|.|+++ +..+. . .. ......++.+...+ ....|.|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~ 80 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR---TDFTLIID 80 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEES
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecC---CeEEEEEc
Confidence 33445667889999999999999988 789999995 22111 0 00 00011233332211 23479999
Q ss_pred cCCCCCCeEEEEEEecCCCc-eeEEEEEEE
Q psy1672 325 NAQESDSGRFYCVAENRAGI-ADANFTLQV 353 (600)
Q Consensus 325 ~v~~~d~G~Y~C~a~N~~G~-~~~~v~L~V 353 (600)
+++.+|+|.|+|.|.|..+. ....+.|.|
T Consensus 81 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V 110 (240)
T 1moe_A 81 PVEADDVATYYCQQTNEDPYTFGGGTKLEI 110 (240)
T ss_dssp SCCGGGCEEEEEEECSSSSCCBCCCEEEEE
T ss_pred CCChhhCEEEEEEEccCCceeecCCEEEEE
Confidence 99999999999999998764 333445555
No 444
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=97.98 E-value=8e-06 Score=91.25 Aligned_cols=72 Identities=26% Similarity=0.457 Sum_probs=59.2
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
....+..|+.+.|.|.+.|.|.+.+.|+++|+.+... ..|.|.+++..|.|.|+|.|.|.
T Consensus 389 ~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~--------------------~~L~i~~~~~~d~G~Y~C~a~n~ 448 (642)
T 1e07_A 389 SYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHT--------------------QELFISNITEKNSGLYTCQANNS 448 (642)
T ss_pred CceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCC--------------------ceEEEccCChhhCeEEEEEEEcC
Confidence 3445678999999999999999999999998766432 25899999999999999999999
Q ss_pred CCceeEEEEEEE
Q psy1672 342 AGIADANFTLQV 353 (600)
Q Consensus 342 ~G~~~~~v~L~V 353 (600)
.|....+..+.+
T Consensus 449 ~g~~~~s~~~~v 460 (642)
T 1e07_A 449 ASGHSRTTVKTI 460 (642)
T ss_pred CCCCcccceEEE
Confidence 988765544444
No 445
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=97.98 E-value=1.4e-05 Score=75.14 Aligned_cols=90 Identities=12% Similarity=0.135 Sum_probs=59.2
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y 334 (600)
|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+++|..+.... ........ ...+.|.|.+++..|.|.|
T Consensus 9 P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~------~~~~~~~~--~~~~~l~I~~v~~~D~G~Y 78 (201)
T 1nkr_A 9 PSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLR------LIGEHHDG--VSKANFSISRMTQDLAGTY 78 (201)
T ss_dssp CEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEE------EECEEETT--EEEEEEEESSCCGGGCEEE
T ss_pred CeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcce------eeeecCCC--CceEEEEeccCCcccCeEE
Confidence 34443343 56789999999999974 778999999886543211 00000111 2345799999999999999
Q ss_pred EEEEecCC-----CceeEEEEEEEE
Q psy1672 335 YCVAENRA-----GIADANFTLQVT 354 (600)
Q Consensus 335 ~C~a~N~~-----G~~~~~v~L~V~ 354 (600)
+|.|.|.. +..+..+.|.|.
T Consensus 79 ~C~a~~~~~~~~~~~~s~~~~l~V~ 103 (201)
T 1nkr_A 79 RCYGSVTHSPYQVSAPSDPLDIVII 103 (201)
T ss_dssp EEEEEBTTBTTCCCCCCCCEEEEEE
T ss_pred EEeEecCCCCccccCCCCCEEEEee
Confidence 99998753 123445566664
No 446
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=97.98 E-value=1.3e-05 Score=77.69 Aligned_cols=82 Identities=17% Similarity=0.314 Sum_probs=56.8
Q ss_pred cccccccccccccccceeeeEeecCCCCeeEEEEcC----------------eeccCCcccCccceEEEeeCCceeeeee
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG----------------RLLLNNTAFSSYQRIFVIEQGEYERKSS 320 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g----------------~~l~~~~~~~~~~~~~~~~~g~~~~~s~ 320 (600)
+...+..+.+.+|+.++|.|.+.+.+.+.|.|++.. ....... ...++.+..++ .....
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~--~~~~~ 78 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGV---EKDKFLINHAS--LTLST 78 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTC---CGGGEEEEEEE--TTEEE
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcc---cCCcEEEEecC--CCEEE
Confidence 334456678899999999999999999999999821 1111100 01333333211 12458
Q ss_pred EEEecCCCCCCeEEEEEEecCCC
Q psy1672 321 LVLTNAQESDSGRFYCVAENRAG 343 (600)
Q Consensus 321 L~I~~v~~~d~G~Y~C~a~N~~G 343 (600)
|.|.+++.+|+|.|+|.|.|..+
T Consensus 79 L~I~~v~~~D~G~Y~C~~~~~~~ 101 (246)
T 4dzb_B 79 LTVTSAHPEDSSFYICSARTSGD 101 (246)
T ss_dssp EEECSCCGGGCEEEEEEECCSSG
T ss_pred EEECCCCHHHCEEEEEEEecCCC
Confidence 99999999999999999998754
No 447
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=97.98 E-value=1.1e-05 Score=87.67 Aligned_cols=94 Identities=17% Similarity=0.309 Sum_probs=66.2
Q ss_pred cccccccccccccccccceeeeEeecCCCC--eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPA--AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+...+....+..|+.++|.|.+.|.|++ .|.|+++|+.+...... .......++.+...+.|.|.+++..|.|
T Consensus 115 P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~---~~~~~~~~~~~~~~s~L~i~~~~~~d~G 191 (523)
T 2rcj_C 115 PTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVET---TKPSKQSNNKYAASSYLSLTPEQWKSHR 191 (523)
T ss_pred CeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEe---ccccccCCCCEEEEEEEEEechhcCCCc
Confidence 444444444555678999999999988764 99999999877543210 0011123344444568999999999999
Q ss_pred EEEEEEecCCCceeEEEEE
Q psy1672 333 RFYCVAENRAGIADANFTL 351 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~v~L 351 (600)
.|+|.|.|..|.....+.+
T Consensus 192 ~Y~C~a~n~~~~~~~~~~~ 210 (523)
T 2rcj_C 192 SYSCQVTHEGSTVEKTVAP 210 (523)
T ss_pred eEEEEEEecCcccccceee
Confidence 9999999999877666554
No 448
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=97.97 E-value=8e-06 Score=77.67 Aligned_cols=80 Identities=14% Similarity=0.166 Sum_probs=54.2
Q ss_pred ccccccccc--ccceeeeEeecCCCCeeEEEEc---CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 261 SRYVEAVSS--ENATVVCRVDSIPPAAISWYWN---GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 261 ~~~~~v~~G--~~v~L~C~v~g~P~p~i~W~~~---g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
+..+.+.+| +.++|.|.+.+ |.+.+.|++. +..+.... +...... ..|.|.+++.+|.|.|+
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~------~~~~~~~------~~l~I~~v~~~D~G~Y~ 80 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGN------RISWDSK------KGFTIPSYMISYAGMVF 80 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSS------SCEEETT------TEEEEEGGGTTTCSEEE
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCC------cccccCC------ccEEEccCChhcCceEE
Confidence 356778899 99999999986 7799999884 65554322 1111122 26999999999999999
Q ss_pred EEEecCCCceeE-EEEEEE
Q psy1672 336 CVAENRAGIADA-NFTLQV 353 (600)
Q Consensus 336 C~a~N~~G~~~~-~v~L~V 353 (600)
|.|.|..+.... .+.|.|
T Consensus 81 C~a~n~~~~~~s~~~~l~v 99 (213)
T 2x1w_L 81 CEAKINDESYQSIMYIVVV 99 (213)
T ss_dssp EEEC----CEECCCEEEEE
T ss_pred EEEEECCeeEEEEEEEEEE
Confidence 999996544322 245555
No 449
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=97.97 E-value=1.6e-05 Score=86.90 Aligned_cols=83 Identities=19% Similarity=0.225 Sum_probs=61.8
Q ss_pred ccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 262 RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 262 ~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+++.+|+.++|.|.+.+.|...+.|++++..+.....+.... ....+|.|.+++.+|+|.|+|.|.|.
T Consensus 56 ~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~----------r~~~SL~I~~v~~~D~G~Y~C~~~n~ 125 (527)
T 3qs9_E 56 AAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQN----------RGVVSMVILKMTETQAGEYLLFIQSE 125 (527)
T ss_dssp CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC---------------CEEEEEESSCCSSSCSEEEEEEEC-
T ss_pred eeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCc----------ceEEEEEECcCChhhCeeEEEEEEec
Confidence 36889999999999999988888999999988765433221111 11236999999999999999999999
Q ss_pred CCceeEEEEEEEE
Q psy1672 342 AGIADANFTLQVT 354 (600)
Q Consensus 342 ~G~~~~~v~L~V~ 354 (600)
.|.....+.+.|.
T Consensus 126 ~~~~~~~~~v~v~ 138 (527)
T 3qs9_E 126 ATNYTILFTVSIR 138 (527)
T ss_dssp -CEEEEEEEEEEC
T ss_pred cccEEEEEEEEEC
Confidence 9987777666653
No 450
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=97.96 E-value=1.3e-05 Score=79.47 Aligned_cols=75 Identities=17% Similarity=0.294 Sum_probs=53.1
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
.+......+.+.+|+.++|.|.+.+. +.|++++..+.. +.....++ ...+.|.|.+++..|.|.|+
T Consensus 2 ~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~--------~~~~~~~~--~~~~~L~i~~~~~~D~G~Y~ 67 (289)
T 3mjg_X 2 VVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ--------EMAKAQDG--TFSSVLTLTNLTGLDTGEYF 67 (289)
T ss_dssp CBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE--------EEEECTTS--CEEEEEEECSCCGGGCEEEE
T ss_pred eecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc--------ceeccCCC--ceeEEEEEccCChhhCEEEE
Confidence 34444556778899999999999874 999998876521 22222222 12368999999999999999
Q ss_pred EEEecCCCc
Q psy1672 336 CVAENRAGI 344 (600)
Q Consensus 336 C~a~N~~G~ 344 (600)
|.|.|..|.
T Consensus 68 C~a~n~~g~ 76 (289)
T 3mjg_X 68 CTHNDSRGL 76 (289)
T ss_dssp EECCC----
T ss_pred EEEcccCCC
Confidence 999999986
No 451
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=97.96 E-value=6.9e-06 Score=78.92 Aligned_cols=92 Identities=20% Similarity=0.273 Sum_probs=61.2
Q ss_pred cccccccccccccccccceeeeEeec-CC-CCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDS-IP-PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g-~P-~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+........+..|+.++|.|.+.+ .| .+.+.|+++|..+...... ........++.+...+.|.|......|.|
T Consensus 136 p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~--~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 213 (237)
T 3sob_L 136 PSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE--SVTEQDSKDSTYSLSSTLTLSKADYEKHK 213 (237)
T ss_dssp CEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEE--EECCCCTTTCCEEEEEEEEEEHHHHTTCC
T ss_pred CceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceee--cccccccCCCcEEEEEEEEEcHHHccCCC
Confidence 44433333344456888999999997 44 5899999999877642100 00011112344455678999999999999
Q ss_pred EEEEEEecCCCceeEE
Q psy1672 333 RFYCVAENRAGIADAN 348 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~~~ 348 (600)
.|+|.|+|........
T Consensus 214 ~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 214 VYACEVTHQGLSSPVT 229 (237)
T ss_dssp EEEEEEECTTCSSCEE
T ss_pred cEEEEEeeCCCCCcee
Confidence 9999999998655433
No 452
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=97.96 E-value=1.4e-05 Score=74.91 Aligned_cols=88 Identities=16% Similarity=0.126 Sum_probs=57.5
Q ss_pred cccccccccccceeeeEeecCCCC---eeEEEEcCeeccCCccc------------CccceEEEeeCCceeeeeeEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPA---AISWYWNGRLLLNNTAF------------SSYQRIFVIEQGEYERKSSLVLTN 325 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p---~i~W~~~g~~l~~~~~~------------~~~~~~~~~~~g~~~~~s~L~I~~ 325 (600)
+..+.+..|+.++|.|.+.+.|.+ .|.|++++......... ....++...........+.|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 456788899999999999988766 48999976543211100 000111111111111235799999
Q ss_pred CCCCCCeEEEEEEecCCCceeEE
Q psy1672 326 AQESDSGRFYCVAENRAGIADAN 348 (600)
Q Consensus 326 v~~~d~G~Y~C~a~N~~G~~~~~ 348 (600)
++.+|.|.|+|.+.|..+.....
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~ 108 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQA 108 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEE
T ss_pred ccHHHCCceeEEEEeccCceeee
Confidence 99999999999999877655443
No 453
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.95 E-value=1.3e-05 Score=78.18 Aligned_cols=88 Identities=14% Similarity=0.240 Sum_probs=59.2
Q ss_pred ccccccccccccccccccceeeeEeecCC-----CCeeEEEEc--CeeccC----C--cccCccceEEEeeCCceeeeee
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIP-----PAAISWYWN--GRLLLN----N--TAFSSYQRIFVIEQGEYERKSS 320 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P-----~p~i~W~~~--g~~l~~----~--~~~~~~~~~~~~~~g~~~~~s~ 320 (600)
.+.+...+..+.+.+|+.++|.|.+.+.| .+.|.|+++ ++.+.. . .......++.+...+ ....
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~ 114 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSG---TDFT 114 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEE
T ss_pred ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCC---CEEE
Confidence 44555556778899999999999999888 489999983 322110 0 000011233332221 2347
Q ss_pred EEEecCCCCCCeEEEEEEecCCCc
Q psy1672 321 LVLTNAQESDSGRFYCVAENRAGI 344 (600)
Q Consensus 321 L~I~~v~~~d~G~Y~C~a~N~~G~ 344 (600)
|.|.+++.+|.|.|+|.|.|..+.
T Consensus 115 L~I~~v~~~D~G~Y~C~a~n~~~~ 138 (254)
T 2c1o_A 115 LKISRVEAEDLGIYYCVQGSHFPP 138 (254)
T ss_dssp EEESSCCGGGCSEEEEEECSSSSC
T ss_pred EEECcCCcccCEEEEEEEEcCcce
Confidence 999999999999999999998664
No 454
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.95 E-value=8.3e-06 Score=71.23 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=56.1
Q ss_pred cccccccccccccccceeeeEeecC--CCCeeEEEEc--CeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSI--PPAAISWYWN--GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~--P~p~i~W~~~--g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
+...+..+.+.+|+.++|.|.+.+. +.+.+.|++. ++.... ......|+....+. ......|+|.+++.+|+|
T Consensus 3 V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~--li~~~~R~~~~~~~-~~~~~sL~I~~v~~~DsG 79 (126)
T 3moq_A 3 VDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQ--SISIGGRYVETVNK-GSKSFSLRISDLRVEDSG 79 (126)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCE--ECCCBTTEEEEEET-TTTEEEEEECSCCGGGCE
T ss_pred eEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceE--EEEeCCcEEEEEeC-CCCEEEEEECcCChHhCE
Confidence 3445677889999999999999865 5678999983 322110 00112233332211 012468999999999999
Q ss_pred EEEEEEecCCC
Q psy1672 333 RFYCVAENRAG 343 (600)
Q Consensus 333 ~Y~C~a~N~~G 343 (600)
.|.|.+.|..+
T Consensus 80 ~Y~C~~~~~~~ 90 (126)
T 3moq_A 80 TYKCQAFYVFF 90 (126)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEcCC
Confidence 99999998764
No 455
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=97.95 E-value=1.8e-05 Score=66.89 Aligned_cols=82 Identities=17% Similarity=0.225 Sum_probs=53.3
Q ss_pred cccccccccccceeeeEeecCC-CCeeEEEEcC--eecc---C--CcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 261 SRYVEAVSSENATVVCRVDSIP-PAAISWYWNG--RLLL---N--NTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P-~p~i~W~~~g--~~l~---~--~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
+..+.+.+|+.++|.|.+.+.. ...+.|++.. .... . ........|+.+..+. ......|+|.+++.+|+|
T Consensus 3 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~~~~~DsG 81 (110)
T 2q87_A 3 ARTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSP-ANLSFTVTLENLTEEDAG 81 (110)
T ss_dssp EEEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEG-GGTEEEEEESSCCGGGCE
T ss_pred CcEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcC-cCCEEEEEEccCCHHHCE
Confidence 3457788999999999987543 4689999843 2110 0 0000012334333211 112458999999999999
Q ss_pred EEEEEEecCC-C
Q psy1672 333 RFYCVAENRA-G 343 (600)
Q Consensus 333 ~Y~C~a~N~~-G 343 (600)
.|.|.+.+.. |
T Consensus 82 ~Y~C~~~~~~~g 93 (110)
T 2q87_A 82 TYWCGVDTPWLQ 93 (110)
T ss_dssp EEEEEEECTTSC
T ss_pred EEEEEEecCccC
Confidence 9999999986 5
No 456
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.94 E-value=2.6e-05 Score=73.52 Aligned_cols=89 Identities=11% Similarity=0.157 Sum_probs=57.1
Q ss_pred cccccccccccceeeeEeecCCCCe---eEEEEcCeeccCCc----------ccCccceEEEeeC----CceeeeeeEEE
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAA---ISWYWNGRLLLNNT----------AFSSYQRIFVIEQ----GEYERKSSLVL 323 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~---i~W~~~g~~l~~~~----------~~~~~~~~~~~~~----g~~~~~s~L~I 323 (600)
+..+.+..|+.++|.|.+.+.+.+. |.|++++..+.... ......+...... ......+.|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 3457788999999999999877664 78999654321100 0000111111110 11123457999
Q ss_pred ecCCCCCCeEEEEEEecCCCceeEEE
Q psy1672 324 TNAQESDSGRFYCVAENRAGIADANF 349 (600)
Q Consensus 324 ~~v~~~d~G~Y~C~a~N~~G~~~~~v 349 (600)
.+++.+|.|.|+|.|.|..|......
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~ 113 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGV 113 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeee
Confidence 99999999999999999887655443
No 457
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=97.94 E-value=1.2e-05 Score=78.42 Aligned_cols=78 Identities=15% Similarity=0.231 Sum_probs=62.9
Q ss_pred cccccccccccceeeeEe-ecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEe
Q psy1672 261 SRYVEAVSSENATVVCRV-DSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAE 339 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~ 339 (600)
+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ...+.|.|.+++..|.|.|+|.|.
T Consensus 89 ~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----------------~~~~~l~i~~~~~~d~G~Y~C~~~ 151 (262)
T 3rjd_A 89 VSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----------------HWNSNLTILKTNISHNGTYHCSGM 151 (262)
T ss_dssp ESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----------------EECCCEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----------------CCCCeEEEEECChhhCEEEEEEEe
Confidence 344567789999999999 57888999999988765321 012478999999999999999999
Q ss_pred cCCCceeEEEEEEEEE
Q psy1672 340 NRAGIADANFTLQVTY 355 (600)
Q Consensus 340 N~~G~~~~~v~L~V~~ 355 (600)
|..+..+..+.|.|..
T Consensus 152 n~~~~~~~~~~l~V~~ 167 (262)
T 3rjd_A 152 GKHRYTSAGISVTVKE 167 (262)
T ss_dssp SSSEEEEECEEEEEEC
T ss_pred CCCCccccceEEEecc
Confidence 9998888878888764
No 458
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.94 E-value=1.5e-05 Score=79.25 Aligned_cols=97 Identities=16% Similarity=0.304 Sum_probs=63.5
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCe-----eccCC-c--ccCccceEEEeeCCceeeeeeEEEec
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGR-----LLLNN-T--AFSSYQRIFVIEQGEYERKSSLVLTN 325 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~-----~l~~~-~--~~~~~~~~~~~~~g~~~~~s~L~I~~ 325 (600)
.+.+...+..+.+.+|+.++|.|.+.+.|.+.|.|++++. .+... . ......++.+..++ ....|.|.+
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~ 88 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG---TDFTLTISS 88 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESS
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccC---CeEEEEEcc
Confidence 3455555677889999999999999999999999998531 11100 0 00011233332211 234799999
Q ss_pred CCCCCCeEEEEEEecCCCc-eeEEEEEEE
Q psy1672 326 AQESDSGRFYCVAENRAGI-ADANFTLQV 353 (600)
Q Consensus 326 v~~~d~G~Y~C~a~N~~G~-~~~~v~L~V 353 (600)
++.+|+|.|+|.|.|..+. ....+.|.|
T Consensus 89 v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V 117 (276)
T 3auv_A 89 LQPEDFATYYCQQHYTTPPTFGCGTKVEI 117 (276)
T ss_dssp CCGGGCEEEEEEECSSSSCCCCCCEEEEC
T ss_pred CChhhCEEEEEEEecCCcccccCCEEEEE
Confidence 9999999999999998654 222344544
No 459
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=97.93 E-value=8.3e-06 Score=77.76 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=56.8
Q ss_pred cccccccceeeeEeecC-CCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 265 EAVSSENATVVCRVDSI-PPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
.+..|+.++|.|.+.|. |.| .|.|++++....... ..... ..+.+...+.|.|.++...| |.|+|.|.|..
T Consensus 136 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~----~~~~~--~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~ 208 (220)
T 1pz5_B 136 SDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRT----VSSVL--QSGFYSLSSLVTVPSSTWPS-QTVICNVAHPA 208 (220)
T ss_dssp CCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEE----CCCEE--ETTEEEEEEEEEECGGGTTT-SCCEEEEEEGG
T ss_pred ccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEE----cCCcc--cCCeEEEEEEEEEcchhcCC-ceEEEEEEECC
Confidence 45679999999999987 888 999999775311000 00111 12444456789999888766 99999999999
Q ss_pred CceeEEEEE
Q psy1672 343 GIADANFTL 351 (600)
Q Consensus 343 G~~~~~v~L 351 (600)
|..++.+.+
T Consensus 209 ~~~~~~~~~ 217 (220)
T 1pz5_B 209 SKVDLIKEI 217 (220)
T ss_dssp GTEEEEEEC
T ss_pred ccEeeeecC
Confidence 987776554
No 460
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.93 E-value=6.3e-06 Score=80.46 Aligned_cols=89 Identities=20% Similarity=0.326 Sum_probs=58.1
Q ss_pred cccccccccccccccccceeeeEeecC-CC-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSI-PP-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
|.+........+..|+.++|.|.+.|. |+ +.+.|+++|+.+...... ........++.+...+.|.|.++...|.|
T Consensus 155 P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~--~~~~~~~~~g~~~~~~~L~i~~~~~~d~G 232 (254)
T 2c1o_A 155 PTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN--SWTDQDSKDSTYSMSSTLTLTKDEYERHN 232 (254)
T ss_dssp CEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEE--EECCCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred CeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCccee--ccccccCCCCcEEEEEEEEeccccccCCC
Confidence 444333333333467799999999884 44 369999999877643100 00000112233445678999999999999
Q ss_pred EEEEEEecCCCce
Q psy1672 333 RFYCVAENRAGIA 345 (600)
Q Consensus 333 ~Y~C~a~N~~G~~ 345 (600)
.|+|.|.|.....
T Consensus 233 ~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 233 SYTCEATHKTSTS 245 (254)
T ss_dssp EEEEEEECTTCSS
T ss_pred eEEEEEEcCCCCC
Confidence 9999999988654
No 461
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=97.92 E-value=1.8e-05 Score=74.64 Aligned_cols=90 Identities=18% Similarity=0.233 Sum_probs=60.0
Q ss_pred cccccccccccccceeeeEeecCCCCeeEEEEc--Ceecc---C-C--cccCccceEEEeeCCceeeeeeEEEecCCCCC
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWN--GRLLL---N-N--TAFSSYQRIFVIEQGEYERKSSLVLTNAQESD 330 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~l~---~-~--~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d 330 (600)
..+ .+.+.+|+.++|.|.+. |.+.+.|+++ +..+. . . .......++.+... .....|.|.+++.+|
T Consensus 6 ~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~~~D 79 (211)
T 3tv3_L 6 QPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKS---GNTASLTVSGLQTDD 79 (211)
T ss_dssp CCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEE---TTEEEEEEESCCGGG
T ss_pred eCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEcc---CCEEEEEECCCChhH
Confidence 344 77888999999999998 8899999994 22211 0 0 00001123332221 124579999999999
Q ss_pred CeEEEEEEecCCC--ceeEEEEEEEE
Q psy1672 331 SGRFYCVAENRAG--IADANFTLQVT 354 (600)
Q Consensus 331 ~G~Y~C~a~N~~G--~~~~~v~L~V~ 354 (600)
+|.|+|.|.|..| .....+.|.|.
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 80 EAVYYCGSLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp CEEEEEEEEETTTEEEECCCEEEEEC
T ss_pred CEEEEEEEecCCCceeECCCceEEEe
Confidence 9999999999988 34445566664
No 462
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.92 E-value=1.7e-06 Score=80.99 Aligned_cols=112 Identities=16% Similarity=0.108 Sum_probs=63.7
Q ss_pred CCCCccEEEeecc-cCcccC----ccccCCCCCccEEEccCCCCCCCCc----cccCCCCCCCEEEccCCCCCccC----
Q psy1672 73 GLLNLQKLFLARC-HIGQID----SGALDGLTNLIEIDLSDNLLTSIPS----LTFQSVRFLRDLNLARNPISKIE---- 139 (600)
Q Consensus 73 ~l~~L~~L~L~~n-~l~~i~----~~~f~~l~~L~~L~Ls~N~l~~l~~----~~f~~l~~L~~L~Ls~N~i~~l~---- 139 (600)
...+|++|+|++| .|..-. ..++...++|++|+|++|.|..-.. ..+...+.|++|+|++|.|....
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 5667777777777 665321 2335556677777777777663211 12333456777777777766421
Q ss_pred cccccCCCCcceeeC--CCCcCcccCh----hhhcCCCCCCEEEcCCCcCC
Q psy1672 140 KGAFQFVPGLVKLDM--SESRLEHISP----EAFTGAKSLESIKLNGNRLS 184 (600)
Q Consensus 140 ~~~~~~l~~L~~L~L--s~n~l~~i~~----~~~~~l~~L~~L~Ls~N~l~ 184 (600)
...+...++|+.|+| ++|.|..... +.+...+.|+.|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 223445556677777 5666654321 23334556666666666553
No 463
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.92 E-value=1.1e-05 Score=77.69 Aligned_cols=85 Identities=20% Similarity=0.329 Sum_probs=55.9
Q ss_pred cccccccccccccccceeeeEeecCCCCeeEEEEcC--ee---ccC---CcccCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RL---LLN---NTAFSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~---l~~---~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
+...+..+.+.+|+.++|.|.+.+.|.+.+.|++++ .. +.. ........++.+..+. ....+.|.|.+++.
T Consensus 130 v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~I~~v~~ 208 (238)
T 2p1y_A 130 VRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNK-REKKLSLHIADSQP 208 (238)
T ss_dssp CEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEET-TTTEEEEEETTCCG
T ss_pred EEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecC-CCCeEEEEEcCCCH
Confidence 334456677889999999999999999999999953 11 100 0000011222222110 01235899999999
Q ss_pred CCCeEEEEEEecCC
Q psy1672 329 SDSGRFYCVAENRA 342 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~ 342 (600)
+|+|.|+|.|.|..
T Consensus 209 ~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 209 GDSATYFCAAIDTN 222 (238)
T ss_dssp GGCEEEEEEEEETT
T ss_pred HHCEEEEEEEeeCC
Confidence 99999999999984
No 464
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=97.92 E-value=1.6e-05 Score=86.33 Aligned_cols=84 Identities=14% Similarity=0.290 Sum_probs=62.0
Q ss_pred ccccccccceeeeEeecC-CCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 264 VEAVSSENATVVCRVDSI-PPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+..|+.+.|.|.+.|. |.| +|.|++++..+.... ..+. ...++.+...+.|.|.+++..| |.|+|.|.|.
T Consensus 229 ~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~----~~~~-~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~ 302 (523)
T 2rcj_C 229 SKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHT----FPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHK 302 (523)
T ss_pred cccccCCceEEEEEEeceeCCCeEEEEecCCcccceEe----CCcE-ecCCCcEEEEEEEEechhhcCC-ceEEEEEEeC
Confidence 445789999999999986 777 899999887643211 1111 1233444556789999999999 9999999999
Q ss_pred CCceeEEEEEEE
Q psy1672 342 AGIADANFTLQV 353 (600)
Q Consensus 342 ~G~~~~~v~L~V 353 (600)
.|.....+.+.+
T Consensus 303 ~g~~~~~~~l~v 314 (523)
T 2rcj_C 303 PSNTKVDKRVEP 314 (523)
T ss_pred CCCcceEEecCC
Confidence 998766665544
No 465
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.92 E-value=1.2e-05 Score=78.82 Aligned_cols=96 Identities=16% Similarity=0.264 Sum_probs=59.5
Q ss_pred cccccccccccccccceeeeEee---cCCCCeeEEEEcCeeccCCcc-c----------Cc-cceEEEeeCCceeeeeeE
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVD---SIPPAAISWYWNGRLLLNNTA-F----------SS-YQRIFVIEQGEYERKSSL 321 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~---g~P~p~i~W~~~g~~l~~~~~-~----------~~-~~~~~~~~~g~~~~~s~L 321 (600)
+...+..+.+.+|+.++|.|.+. +.+.+.|.|++.+........ + .. ..+..+..+ .....+.|
T Consensus 8 v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L 86 (268)
T 3mj6_A 8 LTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGD-TFHNDGSL 86 (268)
T ss_dssp ----CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSC-TTTTBCCE
T ss_pred cccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeec-CCCCEEEE
Confidence 33445667888999999999998 677889999995542211100 0 00 012222111 01123679
Q ss_pred EEecCCCCCCeEEEEEEecCCCceeE--EEEEEE
Q psy1672 322 VLTNAQESDSGRFYCVAENRAGIADA--NFTLQV 353 (600)
Q Consensus 322 ~I~~v~~~d~G~Y~C~a~N~~G~~~~--~v~L~V 353 (600)
.|.+++.+|+|.|+|.|.|..+.... .+.|.|
T Consensus 87 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V 120 (268)
T 3mj6_A 87 LLQDVQKADEGIYTCEIRLKNESMVMKKPVELWV 120 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEE
T ss_pred EECCCCHhHCEEEEEEEEecCCcceEEEEEEEEE
Confidence 99999999999999999998765533 344444
No 466
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=97.91 E-value=9.8e-06 Score=76.78 Aligned_cols=76 Identities=18% Similarity=0.233 Sum_probs=55.4
Q ss_pred ccccccceeeeEeecCC---C-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 266 AVSSENATVVCRVDSIP---P-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 266 v~~G~~v~L~C~v~g~P---~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
+..|+.++|.|.+.|.+ . ..|.|++++..+..... ... ....++.+...+.|.|.+++..|.|.|+|.|.|.
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~---~~~-~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~ 90 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQT---KPR-EEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSA 90 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEE---ECC-CEETTTEEEEEEEEECCHHHHHTTCCEEEEEECT
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCcccccccc---CCC-cCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEcc
Confidence 78899999999999874 2 48999998866542210 000 0123344444568999999999999999999999
Q ss_pred CCce
Q psy1672 342 AGIA 345 (600)
Q Consensus 342 ~G~~ 345 (600)
.|..
T Consensus 91 ~~~~ 94 (207)
T 2vol_A 91 AFPA 94 (207)
T ss_dssp TCSS
T ss_pred CCCC
Confidence 8864
No 467
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=97.91 E-value=1.7e-05 Score=69.11 Aligned_cols=83 Identities=22% Similarity=0.489 Sum_probs=53.4
Q ss_pred cccccccccccccceeeeEeecC-CCCeeEEEEcCee----ccCCcccCccceEEEeeC-C-ceeeeeeEEEecCCCCCC
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSI-PPAAISWYWNGRL----LLNNTAFSSYQRIFVIEQ-G-EYERKSSLVLTNAQESDS 331 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~~----l~~~~~~~~~~~~~~~~~-g-~~~~~s~L~I~~v~~~d~ 331 (600)
..+..+.+.+|+.++|.|.+.+. +.+.|.|++.+.. +.... .....++....+ . .......|.|.+++.+|+
T Consensus 8 q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~-~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds 86 (127)
T 2jju_A 8 QPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQK-EGHFPRVTTVSELTKRNNLDFSISISNITPADA 86 (127)
T ss_dssp CCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESS-SSCCTTEEEC-------CCBCCEEECSCCGGGC
T ss_pred eeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECC-CCccCcEEeeEeeeecCCCEEEEEECCCCHHHC
Confidence 34567888999999999999865 5678999995421 11100 001122222111 0 011246899999999999
Q ss_pred eEEEEEEecCC
Q psy1672 332 GRFYCVAENRA 342 (600)
Q Consensus 332 G~Y~C~a~N~~ 342 (600)
|.|.|.+.|..
T Consensus 87 G~Y~C~~~~~~ 97 (127)
T 2jju_A 87 GTYYCVKFRKG 97 (127)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEcCC
Confidence 99999999864
No 468
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.91 E-value=1.3e-05 Score=75.77 Aligned_cols=73 Identities=23% Similarity=0.372 Sum_probs=51.9
Q ss_pred ccccccceeeeEeecC----CCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 266 AVSSENATVVCRVDSI----PPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 266 v~~G~~v~L~C~v~g~----P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
+.+|+.++|.|.+.+. |.|.+.|++++....... ....+.|.|..+...|.|.|+|.|.|.
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~---------------~~~~~~L~i~~~~~~~~g~Y~C~a~n~ 199 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPE---------------TTRSSELTLTPRPEDHGTNLTCQMKRQ 199 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSS---------------CCCSSEEEECCCTTCCSCEEEEEEECC
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCCC---------------ceeEEEEEEecccHHcCcEEEEEEEeC
Confidence 5689999999999864 889999999875432110 112357899999999999999999998
Q ss_pred CCc--eeEEEEEEE
Q psy1672 342 AGI--ADANFTLQV 353 (600)
Q Consensus 342 ~G~--~~~~v~L~V 353 (600)
.+. .++.+.|.|
T Consensus 200 ~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 200 GAQVTTERTVQLNV 213 (214)
T ss_dssp ----CCEEEEECCC
T ss_pred CCCcceEEEEEEEe
Confidence 754 345555443
No 469
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=97.90 E-value=3.8e-05 Score=73.59 Aligned_cols=80 Identities=18% Similarity=0.421 Sum_probs=58.0
Q ss_pred cccccccceeeeEeecC-CCC-eeEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCC--CCCeEEEEEEe
Q psy1672 265 EAVSSENATVVCRVDSI-PPA-AISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQE--SDSGRFYCVAE 339 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~-P~p-~i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~--~d~G~Y~C~a~ 339 (600)
.+..|+.++|.|.+.+. |.+ .|.|++ +|+.+..... ... ...++.+...+.|.|..... .|.|.|+|.|.
T Consensus 137 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~---~~~--~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~ 211 (223)
T 1dee_B 137 NSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRG---FPS--VLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQ 211 (223)
T ss_dssp CCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEE---CCC--EEETTEEEEEEEEEEECTTTTSTTCCEEEEEEE
T ss_pred ccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEE---CCc--cccCCeEEEEEEEEEcHHHhccCCCCEEEEEEE
Confidence 34678999999999976 776 999999 8887654110 111 11235555567889988775 78899999999
Q ss_pred cCCCceeEEE
Q psy1672 340 NRAGIADANF 349 (600)
Q Consensus 340 N~~G~~~~~v 349 (600)
|..|.....+
T Consensus 212 n~~~~~~~~~ 221 (223)
T 1dee_B 212 HPNGNKEKDV 221 (223)
T ss_dssp CTTCCEEEEE
T ss_pred eCCCCCcccc
Confidence 9998876544
No 470
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=97.90 E-value=2.5e-05 Score=79.12 Aligned_cols=90 Identities=17% Similarity=0.249 Sum_probs=65.3
Q ss_pred ccccccccc---ccceeeeE-eecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEE
Q psy1672 261 SRYVEAVSS---ENATVVCR-VDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336 (600)
Q Consensus 261 ~~~~~v~~G---~~v~L~C~-v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C 336 (600)
...+.+..| +.+.|.|. +.+.|.+.+.|++++..... .......++.....+.|.|.++...|.|.|+|
T Consensus 139 ~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~-------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 211 (331)
T 3u83_A 139 QAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAE-------YQEIRNPNGTVTVISRYRLVPSREAHQQSLAC 211 (331)
T ss_dssp SSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEE-------EEEEECTTSCEEEEEEEEECCCGGGTTCEEEE
T ss_pred CCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccc-------cceeECCCCcEEEEEEEEEEeccccCCCEEEE
Confidence 344566677 77999998 77999999999995321110 01112233444455689999999999999999
Q ss_pred EEecCCCceeEEEEEEEEEcc
Q psy1672 337 VAENRAGIADANFTLQVTYRG 357 (600)
Q Consensus 337 ~a~N~~G~~~~~v~L~V~~~~ 357 (600)
.|.|..|..+..+.|.|...+
T Consensus 212 ~a~n~~~~~~~~~~l~V~~~P 232 (331)
T 3u83_A 212 IVNYHMDRFKESLTLNVQYEP 232 (331)
T ss_dssp EEEETTEEEEEEEECCEEEEE
T ss_pred EEecCCCcceeeEEEEEecCC
Confidence 999999998888888876543
No 471
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=97.90 E-value=1.8e-05 Score=78.45 Aligned_cols=82 Identities=21% Similarity=0.317 Sum_probs=61.2
Q ss_pred cccccccccccceeeeEeecCCCCe-eEEEE-cCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEE
Q psy1672 261 SRYVEAVSSENATVVCRVDSIPPAA-ISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVA 338 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P~p~-i~W~~-~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a 338 (600)
+....+..|+.+.|.|.+.+.+.+. +.|++ ++..+.... +..+..++ .|.|.+++..|.|.|+|.|
T Consensus 96 ~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~------~~~~~~~~------~L~i~~v~~~d~G~Y~C~a 163 (289)
T 3ejj_X 96 AQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKT------VYFFSPWR------GFIIRKAKVLDSNTYVCKT 163 (289)
T ss_dssp CSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTC------CEEEETTT------EEEESSCCGGGCEEEEEEE
T ss_pred cceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCc------cEEECCCC------CEEEeecccccCEEEEEEE
Confidence 4556778899999999999877765 99987 665554322 33333333 6999999999999999999
Q ss_pred e-cCCCceeEEEEEEEE
Q psy1672 339 E-NRAGIADANFTLQVT 354 (600)
Q Consensus 339 ~-N~~G~~~~~v~L~V~ 354 (600)
. |..+..+..+.|.|.
T Consensus 164 ~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 164 MVNGRESTSTGIWLKVN 180 (289)
T ss_dssp EETTEEEECCCEEEEEE
T ss_pred EeCCCccccccEEEEEE
Confidence 9 555666666777775
No 472
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=97.89 E-value=2.5e-05 Score=77.65 Aligned_cols=80 Identities=13% Similarity=0.299 Sum_probs=61.1
Q ss_pred ccccccccccccccccccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeE
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGR 333 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~ 333 (600)
.|.+...+..+.+..|+.++|.|.+.+ .+.|++++..+. ... ..+ +.|.|.+++..|.|.
T Consensus 12 ~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~----------~~~-~~~-----~~L~i~~~~~~d~G~ 71 (290)
T 2o26_X 12 PPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNE----------MVE-NKK-----NEWIQEKAEATRTGT 71 (290)
T ss_dssp CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSSC----------EEE-ECS-----SEEEETTCCGGGCEE
T ss_pred CCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCccee----------eec-CCC-----ceEEEeccCHHhCeE
Confidence 355555567778899999999999987 899999886551 001 111 489999999999999
Q ss_pred EEEEEecCCCceeEEEEEEEEEc
Q psy1672 334 FYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 334 Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
|+|.|.| |. ...+.|.|...
T Consensus 72 Y~C~~~n--g~-~~~~~l~V~~~ 91 (290)
T 2o26_X 72 YTCSNSN--GL-TSSIYVFVRDP 91 (290)
T ss_dssp EEEEESS--SC-EEEEEEEEECS
T ss_pred EEEEeeC--Cc-cEEEEEEEeCC
Confidence 9999999 54 66677777643
No 473
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=97.89 E-value=1.1e-05 Score=75.17 Aligned_cols=65 Identities=22% Similarity=0.301 Sum_probs=49.4
Q ss_pred cccceeeeEeecCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCceeEE
Q psy1672 269 SENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADAN 348 (600)
Q Consensus 269 G~~v~L~C~v~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~ 348 (600)
+..++|.|.+.+.|.+.+.|+++|+.+ ... . ..+.+.. ...|.|.|+|+|.|.+|..+..
T Consensus 115 ~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~~------------~------~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~ 174 (182)
T 1hnf_A 115 CINTTLTCEVMNGTDPELNLYQDGKHL-KLS------------Q------RVITHKW-TTSLSAKFKCTAGNKVSKESSV 174 (182)
T ss_dssp TTTTEEEEECSSCSSCEEEEEESSCEE-EEE------------S------SCEEEEC-CSCEEEEEEEEEECSSCEEEEE
T ss_pred cCcEEEEeEccCCCCCEEEEEECCEEC-CCC------------C------cEEEEec-ccCCCcEEEEEEEeCCCCcEEc
Confidence 347899999999899999999998766 110 0 1233322 4789999999999999998887
Q ss_pred EEEEE
Q psy1672 349 FTLQV 353 (600)
Q Consensus 349 v~L~V 353 (600)
..+.+
T Consensus 175 ~~~~c 179 (182)
T 1hnf_A 175 EPVSC 179 (182)
T ss_dssp EEEEE
T ss_pred ceecC
Confidence 77755
No 474
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=97.89 E-value=6.4e-06 Score=77.20 Aligned_cols=88 Identities=24% Similarity=0.309 Sum_probs=58.7
Q ss_pred cccccccccceeeeEee----cCCCCeeEEEEcCeeccCCcc-----cC-ccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 263 YVEAVSSENATVVCRVD----SIPPAAISWYWNGRLLLNNTA-----FS-SYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~----g~P~p~i~W~~~g~~l~~~~~-----~~-~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.+.+..|+.++|.|.+. +.|.+.+.|.+++..+..... .. ...+..+... ....|.|.+++.+|.|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~----~~~~L~I~~v~~~D~G 78 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDIT----NNLSIVILALRPSDEG 78 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEEST----TTTEEEECSCCGGGCE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccC----CCcEEEEecccchhCe
Confidence 35678899999999985 346678999998876521100 00 0112222111 1247999999999999
Q ss_pred EEEEEEecCCCcee-----EEEEEEEE
Q psy1672 333 RFYCVAENRAGIAD-----ANFTLQVT 354 (600)
Q Consensus 333 ~Y~C~a~N~~G~~~-----~~v~L~V~ 354 (600)
.|+|.|.|..|... ..+.|.|.
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~~~~l~V~ 105 (201)
T 1dr9_A 79 TYECVVLKYEKDAFKREHLAEVTLSVK 105 (201)
T ss_dssp EEEEEEEECCTTSCEEEEEEEEEEEEE
T ss_pred EEEEEEEcCCCCccccccccEEEEEEc
Confidence 99999999887653 45556554
No 475
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=97.88 E-value=9.9e-06 Score=76.58 Aligned_cols=84 Identities=17% Similarity=0.317 Sum_probs=57.6
Q ss_pred ccccccccccccccccccceeeeEeec-CCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCe
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDS-IPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g-~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G 332 (600)
.|.+........+..|+.++|.|.+.+ .|.+.|.|+++|+.+...... ........++.+...+.|.|..++..|.|
T Consensus 114 ~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~--~~~~~~~~~~~~~~~s~L~i~~~~~~d~g 191 (213)
T 3nl4_L 114 APTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIEN--SKTPQNSADCTYNLSSTLTLTSTEYNSHK 191 (213)
T ss_dssp CCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEE--EECCCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred CCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeec--ccCcccCCCCeEEEEEEEEecHHHcCCCC
Confidence 344433333445567999999999998 899999999999877542100 00000112234445578999999999999
Q ss_pred EEEEEEe
Q psy1672 333 RFYCVAE 339 (600)
Q Consensus 333 ~Y~C~a~ 339 (600)
.|+|.|.
T Consensus 192 ~Y~C~a~ 198 (213)
T 3nl4_L 192 EYTCKVT 198 (213)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999999
No 476
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=97.88 E-value=1.4e-05 Score=77.99 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=56.4
Q ss_pred ccccccceeeeEeecC---CCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 266 AVSSENATVVCRVDSI---PPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 266 v~~G~~v~L~C~v~g~---P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
+..|+.++|.|.+.+. |.+ .|.|++++..+..... . ......++.+...+.|.|.+++..|.|.|+|.|.|.
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~---~-~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~ 104 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQT---H-APEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSG 104 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEE---C-CCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCccc---c-cceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecc
Confidence 7799999999999976 766 8999998765542210 0 011123344455678999999999999999999999
Q ss_pred CCce
Q psy1672 342 AGIA 345 (600)
Q Consensus 342 ~G~~ 345 (600)
.|..
T Consensus 105 ~~~~ 108 (239)
T 1i1c_A 105 AFPA 108 (239)
T ss_dssp SSSS
T ss_pred cCCC
Confidence 8864
No 477
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=97.88 E-value=2.4e-05 Score=75.09 Aligned_cols=97 Identities=14% Similarity=0.256 Sum_probs=62.7
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcC--eecc---C--C-cccCccceEEEeeCCceeeeeeEEEecC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RLLL---N--N-TAFSSYQRIFVIEQGEYERKSSLVLTNA 326 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~l~---~--~-~~~~~~~~~~~~~~g~~~~~s~L~I~~v 326 (600)
+.+...+..+.+..|+.++|.|.+.+.|.+.+.|++.. .... . . .......++.....+ ....|.|.++
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v 101 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG---TDFTLTISSL 101 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSC
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCC---CEEEEEECCC
Confidence 34444466788899999999999999889999999832 1110 0 0 000011233222111 2457999999
Q ss_pred CCCCCeEEEEEEecCCCce-eEEEEEEEE
Q psy1672 327 QESDSGRFYCVAENRAGIA-DANFTLQVT 354 (600)
Q Consensus 327 ~~~d~G~Y~C~a~N~~G~~-~~~v~L~V~ 354 (600)
+.+|+|.|+|.|.|..+.. ...+.+.|.
T Consensus 102 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 130 (237)
T 3sob_L 102 QPEDFATYYCQQSYTTPPTFGQGTKVEIK 130 (237)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred ChhhCeEEEEeeccCCceEEcCcEEEEEe
Confidence 9999999999999987632 233455553
No 478
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=97.88 E-value=1.1e-05 Score=76.34 Aligned_cols=91 Identities=21% Similarity=0.306 Sum_probs=60.4
Q ss_pred ccccccccccccccccccceeeeEeecCCC--CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCC
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPP--AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~P~--p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~ 331 (600)
.|.+...+....+..|+.++|.|.+.+.++ +.+.|+++|+.+...... ........++.+...+.|.|......|.
T Consensus 112 ~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~--~~~~~~~~~g~~~~~s~l~i~~~~~~d~ 189 (213)
T 3r06_A 112 KPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQ--SVTDQDSKDSTYSLSSTLSLTKADYERH 189 (213)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEE--EECCCCTTTCCEEEEEEEEEEHHHHHTC
T ss_pred CceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEe--ccCceeCCCCcEEEEEEEEeCHHHhccC
Confidence 344444344444556788999999997654 389999999887642100 0011111234455566888999988899
Q ss_pred eEEEEEEecCCCcee
Q psy1672 332 GRFYCVAENRAGIAD 346 (600)
Q Consensus 332 G~Y~C~a~N~~G~~~ 346 (600)
|.|+|.|+|......
T Consensus 190 g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 190 NLYTCEVTHKTSTAA 204 (213)
T ss_dssp CEEEEEEEETTCSSC
T ss_pred CeEEEEEEecccCcc
Confidence 999999999875543
No 479
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.87 E-value=2.9e-05 Score=75.36 Aligned_cols=94 Identities=12% Similarity=0.225 Sum_probs=61.3
Q ss_pred cccccccccccccccceeeeEeecCCCCeeEEEEcC--eec---cCC-cc--cCccceEEEeeCCceeeeeeEEEecCCC
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--RLL---LNN-TA--FSSYQRIFVIEQGEYERKSSLVLTNAQE 328 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~~l---~~~-~~--~~~~~~~~~~~~g~~~~~s~L~I~~v~~ 328 (600)
+...+..+.+.+|+.++|.|.+.+.|.+.+.|+++. ..+ ... .. .....++.+..++ ....|.|.+++.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v~~ 80 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG---TDFTLSINSVET 80 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET---TEEEEEESSCCG
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCC---CEEEEEECCCCh
Confidence 344466788899999999999999998999999842 111 000 00 0011233332211 235799999999
Q ss_pred CCCeEEEEEEecCCCce-eEEEEEEE
Q psy1672 329 SDSGRFYCVAENRAGIA-DANFTLQV 353 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~G~~-~~~v~L~V 353 (600)
+|+|.|+|.|.|..+.. ...+.|.|
T Consensus 81 ~D~G~Y~C~~~n~~~~~~~~~~~L~V 106 (242)
T 2znx_A 81 EDFGMYFCQQSNSXPYTFGGGTKLEI 106 (242)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred HHCEEEEEeEecCCceEECCCEEEEE
Confidence 99999999999986532 22345555
No 480
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.87 E-value=1.4e-05 Score=78.34 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=55.5
Q ss_pred cccccccccccccceeeeEeecCCCCeeEEEE--cCeeccCC----c--ccCccceEEEeeCCceeeeeeEEEecCCCCC
Q psy1672 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYW--NGRLLLNN----T--AFSSYQRIFVIEQGEYERKSSLVLTNAQESD 330 (600)
Q Consensus 259 ~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~--~g~~l~~~----~--~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d 330 (600)
..+..+.+.+|+.++|.|.+.+.|.+.+.|++ ++..+... . ......++.+..+ .....|.|.+++.+|
T Consensus 144 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~~~D 220 (257)
T 1f3r_B 144 QSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGS---GTDYTLTISSLQPED 220 (257)
T ss_dssp EETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE---BTEEEEEECSCCGGG
T ss_pred ccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecC---CCEEEEEECCCChhh
Confidence 33556778899999999999999889999999 55432100 0 0000122222211 123579999999999
Q ss_pred CeEEEEEEecCC
Q psy1672 331 SGRFYCVAENRA 342 (600)
Q Consensus 331 ~G~Y~C~a~N~~ 342 (600)
+|.|+|.|.|..
T Consensus 221 ~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 221 VATYFCYQYNNG 232 (257)
T ss_dssp CSEEEEEEESSS
T ss_pred CEEEEEEEeCCC
Confidence 999999999974
No 481
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=97.86 E-value=2.4e-05 Score=66.24 Aligned_cols=81 Identities=17% Similarity=0.328 Sum_probs=53.8
Q ss_pred ccccccccccccccceeeeEeecCC----CCeeEEEEc--Cee---cc-CCcc--cCccceEEEeeCCceeeeeeEEEec
Q psy1672 258 RMDSRYVEAVSSENATVVCRVDSIP----PAAISWYWN--GRL---LL-NNTA--FSSYQRIFVIEQGEYERKSSLVLTN 325 (600)
Q Consensus 258 ~~~~~~~~v~~G~~v~L~C~v~g~P----~p~i~W~~~--g~~---l~-~~~~--~~~~~~~~~~~~g~~~~~s~L~I~~ 325 (600)
...+..+.+.+|+.++|.|.+.+.+ .+.+.|++. +.. +. .... .....|+.+...+ ....|+|.+
T Consensus 5 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~L~I~~ 81 (111)
T 1j05_L 5 TQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR---TDFTLIIDP 81 (111)
T ss_dssp EEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEET---TEEEEEESS
T ss_pred EEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccC---CEEEEEECC
Confidence 3345677889999999999998776 478999984 221 11 0000 0011233332211 235799999
Q ss_pred CCCCCCeEEEEEEecC
Q psy1672 326 AQESDSGRFYCVAENR 341 (600)
Q Consensus 326 v~~~d~G~Y~C~a~N~ 341 (600)
++.+|+|.|.|.+.|.
T Consensus 82 v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 82 VEADDVATYYCQQTNE 97 (111)
T ss_dssp CCGGGCEEEEEEECSS
T ss_pred CCcccCEEEEEEEecC
Confidence 9999999999999985
No 482
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.86 E-value=2.7e-05 Score=76.16 Aligned_cols=99 Identities=13% Similarity=0.234 Sum_probs=63.0
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEc--Ceecc---C-Cc--ccCccceEEEeeCCceeeeeeEEEecC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWN--GRLLL---N-NT--AFSSYQRIFVIEQGEYERKSSLVLTNA 326 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~l~---~-~~--~~~~~~~~~~~~~g~~~~~s~L~I~~v 326 (600)
+.+...+..+.+..|+.++|.|.+.+.|.+.+.|+++ +..+. . .. ......++.....+ ....|.|.++
T Consensus 139 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v 215 (256)
T 3umt_A 139 IQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSG---SDYSLTISSL 215 (256)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEET---TEEEEEECSC
T ss_pred cEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCC---CEEEEEECCC
Confidence 4444455667888999999999999998889999984 22211 0 00 00001223222222 2347999999
Q ss_pred CCCCCeEEEEEEecCCCce-eEEEEEEEEEc
Q psy1672 327 QESDSGRFYCVAENRAGIA-DANFTLQVTYR 356 (600)
Q Consensus 327 ~~~d~G~Y~C~a~N~~G~~-~~~v~L~V~~~ 356 (600)
+.+|+|.|+|.|.|..+.. .....|.|...
T Consensus 216 ~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 216 ESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp CGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred ChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 9999999999999965433 23356666543
No 483
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=97.86 E-value=3.7e-05 Score=76.94 Aligned_cols=75 Identities=9% Similarity=0.171 Sum_probs=56.9
Q ss_pred cccccccccceeeeEee-cCCCCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 263 YVEAVSSENATVVCRVD-SIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 263 ~~~v~~G~~v~L~C~v~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
...+..|+.+.|.|.+. +.|.+.+.|+++++.+.... +..+..+.. .....|.|.+++..|.|.|+|.|.|.
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~------~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~~~ 188 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGP------KYKMHIDRN-TGIIEMFMEKLQDEDEGTYTFQLQDG 188 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSS------SCEEEEETT-TTEEEEEESCCCGGGCEEEEEEEESS
T ss_pred ceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCC------cEEEEEccC-CCEEEEEEccCCcccCEeEEEEEEeC
Confidence 66788999999999999 89999999999998876543 222222110 11246999999999999999999875
Q ss_pred CCc
Q psy1672 342 AGI 344 (600)
Q Consensus 342 ~G~ 344 (600)
.+.
T Consensus 189 ~~~ 191 (312)
T 2y23_A 189 KAT 191 (312)
T ss_dssp SCE
T ss_pred Cce
Confidence 443
No 484
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.86 E-value=2.9e-05 Score=85.55 Aligned_cols=103 Identities=21% Similarity=0.224 Sum_probs=71.9
Q ss_pred ccccccccccccccccccceeeeEeecC-CCCeeEEEEcCeecc----CCc--ccC-ccceEEEeeCCceeeeeeEEEec
Q psy1672 254 KPEIRMDSRYVEAVSSENATVVCRVDSI-PPAAISWYWNGRLLL----NNT--AFS-SYQRIFVIEQGEYERKSSLVLTN 325 (600)
Q Consensus 254 ~p~i~~~~~~~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~~l~----~~~--~~~-~~~~~~~~~~g~~~~~s~L~I~~ 325 (600)
.|.+...+....+..|+.+.|.|.+.+. |.+.+.|++++.... ... ... ...+..+..++.......|.|.+
T Consensus 112 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 191 (585)
T 2ocw_A 112 GPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQ 191 (585)
T ss_pred CccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEcc
Confidence 3444455666778899999999999965 457899999765321 000 000 12334444444322334799999
Q ss_pred CCCCCCeEEEEEEecCCCceeEEEEEEEEEc
Q psy1672 326 AQESDSGRFYCVAENRAGIADANFTLQVTYR 356 (600)
Q Consensus 326 v~~~d~G~Y~C~a~N~~G~~~~~v~L~V~~~ 356 (600)
++..|.|.|+|.|.|..|.....+.|.|...
T Consensus 192 v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (585)
T 2ocw_A 192 LRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 222 (585)
T ss_pred CChhHCeEEEEEeccCCccccceEEEEEccC
Confidence 9999999999999999999888888888653
No 485
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.85 E-value=1.6e-05 Score=77.23 Aligned_cols=96 Identities=19% Similarity=0.316 Sum_probs=62.5
Q ss_pred cccccccccccccccccceeeeEeecCCCCeeEEEEcC--e---eccCC-c--ccCccceEEEeeCCceeeeeeEEEecC
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNG--R---LLLNN-T--AFSSYQRIFVIEQGEYERKSSLVLTNA 326 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~g--~---~l~~~-~--~~~~~~~~~~~~~g~~~~~s~L~I~~v 326 (600)
..+...+..+.+.+|+.++|.|.+.+.|.+.+.|++.. . .+... . ......++.....+ ....|.|.++
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~---~~~~L~I~~v 81 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSG---TDYSLTISNL 81 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET---TEEEEEESSC
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCC---CEEEEEEccC
Confidence 34445567788899999999999999999999999842 1 11000 0 00011222222211 2347999999
Q ss_pred CCCCCeEEEEEEecCCCce-eEEEEEEE
Q psy1672 327 QESDSGRFYCVAENRAGIA-DANFTLQV 353 (600)
Q Consensus 327 ~~~d~G~Y~C~a~N~~G~~-~~~v~L~V 353 (600)
+.+|+|.|+|.|.|..+.. .....|.|
T Consensus 82 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V 109 (250)
T 3esu_F 82 EQEDIGTYFCQQGNTLPWTFGGGTKLEI 109 (250)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred ChhhCEEEEEEEeeCCCceECCCEEEEE
Confidence 9999999999999986653 22334555
No 486
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.85 E-value=2.1e-05 Score=72.44 Aligned_cols=72 Identities=13% Similarity=0.263 Sum_probs=52.1
Q ss_pred ccccccccceeeeEeecCCCC--eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 264 VEAVSSENATVVCRVDSIPPA--AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 264 ~~v~~G~~v~L~C~v~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
..+.+|+.++|.|.+.+.|.+ .+.|++++..+...... .....+.|. +..|.|.|+|.|.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~--------------~~~~~l~i~--~~~d~G~Y~C~~~n~ 71 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP--------------GQKTEFKVD--SDDQWGEYSCVFLPE 71 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC--------------CSEEEEEEC--GGGCCEEEEEEEEST
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc--------------CCcEEEEEe--chhhCeEEEEEEECC
Confidence 456789999999999988777 89999998877543311 112345555 588999999999993
Q ss_pred CCceeEEEEEEEE
Q psy1672 342 AGIADANFTLQVT 354 (600)
Q Consensus 342 ~G~~~~~v~L~V~ 354 (600)
. ...+.|.|.
T Consensus 72 ~---~~~~~l~V~ 81 (184)
T 3b5h_A 72 P---MGTANIQLH 81 (184)
T ss_dssp T---SCEEEEEEC
T ss_pred c---CcEEEEEEe
Confidence 2 345566664
No 487
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=97.85 E-value=8.9e-06 Score=69.94 Aligned_cols=86 Identities=19% Similarity=0.435 Sum_probs=53.8
Q ss_pred ccccccccccccccccceeeeEeecC-CCCeeEEEEcCee----ccCCcccCccceEEEeeC--CceeeeeeEEEecCCC
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSI-PPAAISWYWNGRL----LLNNTAFSSYQRIFVIEQ--GEYERKSSLVLTNAQE 328 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~-P~p~i~W~~~g~~----l~~~~~~~~~~~~~~~~~--g~~~~~s~L~I~~v~~ 328 (600)
.+...+..+.+.+|+.++|.|.+.+. +.+.+.|++++.. +.... .....+.....+ ........|.|.+++.
T Consensus 9 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~-~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 87 (120)
T 2yz1_A 9 KVTQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFT-GEHFPRVTNVSDATKRNNMDFSIRISNVTP 87 (120)
T ss_dssp CEECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEEC-EECTTTCCSEEECCBSSTTBCCEEECSCCG
T ss_pred EEECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcC-CcccCcccceeeccccCCCeEEEEECCCCH
Confidence 33444567889999999999999865 5678999996411 10000 000001100000 0001235799999999
Q ss_pred CCCeEEEEEEecCC
Q psy1672 329 SDSGRFYCVAENRA 342 (600)
Q Consensus 329 ~d~G~Y~C~a~N~~ 342 (600)
+|+|.|.|.+.+..
T Consensus 88 ~DsG~Y~C~~~~~~ 101 (120)
T 2yz1_A 88 EDAGTYYCVKFQKG 101 (120)
T ss_dssp GGCEEEEEEEEECC
T ss_pred HHCEEEEEEEEcCC
Confidence 99999999999864
No 488
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=97.85 E-value=1.7e-05 Score=76.62 Aligned_cols=82 Identities=15% Similarity=0.164 Sum_probs=60.1
Q ss_pred ccccccccccccceeeeEeecC-CC-C-eeEEEEcCeec-cCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEE
Q psy1672 260 DSRYVEAVSSENATVVCRVDSI-PP-A-AISWYWNGRLL-LNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335 (600)
Q Consensus 260 ~~~~~~v~~G~~v~L~C~v~g~-P~-p-~i~W~~~g~~l-~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~ 335 (600)
.+....+..|+.++|.|.+.|. |. | .|.|+++|+.+ .... .......++.+...+.|.|.+++..|.|.|+
T Consensus 19 ~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~-----~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~ 93 (231)
T 2w59_A 19 PPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDP-----MVLQEHFNGTYSASSAVPVSTQDWLSGERFT 93 (231)
T ss_dssp CCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCC-----CEEEECTTSCEEEEEEEECCHHHHHTTCCEE
T ss_pred CcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeecccccc-----ccceECCCCcEEEEEEEEecchhccCCCEEE
Confidence 3455667799999999999985 64 4 99999988766 2211 1122234455555678999999999999999
Q ss_pred EEEecCCCcee
Q psy1672 336 CVAENRAGIAD 346 (600)
Q Consensus 336 C~a~N~~G~~~ 346 (600)
|.|.|..+...
T Consensus 94 C~~~~~~~~~~ 104 (231)
T 2w59_A 94 CTVQHEELPLP 104 (231)
T ss_dssp EEEECTTCSSC
T ss_pred EEEEcCCCCCc
Confidence 99999887543
No 489
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=97.84 E-value=2.4e-05 Score=66.63 Aligned_cols=93 Identities=20% Similarity=0.314 Sum_probs=58.0
Q ss_pred cccccccccccceeeeEeecC--CCCeeEEEEcC-------eecc--CCc--ccCccceEEEeeCCceeeeeeEEEecCC
Q psy1672 261 SRYVEAVSSENATVVCRVDSI--PPAAISWYWNG-------RLLL--NNT--AFSSYQRIFVIEQGEYERKSSLVLTNAQ 327 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~--P~p~i~W~~~g-------~~l~--~~~--~~~~~~~~~~~~~g~~~~~s~L~I~~v~ 327 (600)
+..+.+..|+.++|.|..... ....+.|++.. ..+. ... ......++.+..+ ......+|+|.+++
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~-~~~~~~sL~I~~v~ 82 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGN-ISEGNVSLTIENTV 82 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSC-GGGTBCCEEESSCC
T ss_pred ccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecC-ccCCeEEEEEccCC
Confidence 456778899999999988742 34679999964 1111 000 0001122222111 11224579999999
Q ss_pred CCCCeEEEEEEecCCCceeEEEEEEEE
Q psy1672 328 ESDSGRFYCVAENRAGIADANFTLQVT 354 (600)
Q Consensus 328 ~~d~G~Y~C~a~N~~G~~~~~v~L~V~ 354 (600)
.+|+|.|.|.+.+........+.|.|.
T Consensus 83 ~~DsG~Y~C~v~~~~~~~~~~v~L~V~ 109 (115)
T 2or7_A 83 VGDGGPYCCVVEIPGAFHFVDYMLEVK 109 (115)
T ss_dssp GGGCEEEEEEECCTTSCEEEEEEEEEE
T ss_pred HHHCEEEEEEEECCCceeEEEEEEEEc
Confidence 999999999999876555666666664
No 490
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=97.84 E-value=1.8e-05 Score=74.81 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=50.1
Q ss_pred cccccceeeeEeecCCC----CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 267 VSSENATVVCRVDSIPP----AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 267 ~~G~~v~L~C~v~g~P~----p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
..|+.++|.|.+.|.++ ..|.|+++++.+..... .......++.+...+.|.|......|.|.|+|.|.|..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~----~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~ 91 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT----KPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKA 91 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEE----CCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTT
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCccc----CCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCc
Confidence 68999999999998753 49999999977653210 11112233433333445554444455999999999998
Q ss_pred Cce
Q psy1672 343 GIA 345 (600)
Q Consensus 343 G~~ 345 (600)
+..
T Consensus 92 ~~~ 94 (207)
T 1l6x_A 92 LPA 94 (207)
T ss_dssp SSS
T ss_pred CCc
Confidence 865
No 491
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=97.84 E-value=3.5e-05 Score=66.99 Aligned_cols=96 Identities=17% Similarity=0.287 Sum_probs=60.8
Q ss_pred cccccccccccccccceeeeEeecCC----CCeeEEEEcC--ee---ccCC-c--ccCccceEEEeeCCceeeeeeEEEe
Q psy1672 257 IRMDSRYVEAVSSENATVVCRVDSIP----PAAISWYWNG--RL---LLNN-T--AFSSYQRIFVIEQGEYERKSSLVLT 324 (600)
Q Consensus 257 i~~~~~~~~v~~G~~v~L~C~v~g~P----~p~i~W~~~g--~~---l~~~-~--~~~~~~~~~~~~~g~~~~~s~L~I~ 324 (600)
+...+..+.+.+|+.++|.|.+.+.+ .+.+.|++.. +. +... . ......|+.+... .....|+|.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~---~~~~sL~I~ 80 (126)
T 4ffy_L 4 LTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGS---ETDFTLTID 80 (126)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE---TTEEEEEES
T ss_pred EEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecC---CCEEEEEEC
Confidence 34446678899999999999998776 5689999842 11 1100 0 0001123332211 134589999
Q ss_pred cCCCCCCeEEEEEEecCCCce-eEEEEEEEEE
Q psy1672 325 NAQESDSGRFYCVAENRAGIA-DANFTLQVTY 355 (600)
Q Consensus 325 ~v~~~d~G~Y~C~a~N~~G~~-~~~v~L~V~~ 355 (600)
+++.+|+|.|.|.+.|..... .....|.|..
T Consensus 81 ~v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~ 112 (126)
T 4ffy_L 81 SVETDDAATYYCQQNNEDPYTFGGGTKLEIKG 112 (126)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred CCCHHHCEEEEEEEecCCCcEECCCEEEEEec
Confidence 999999999999999865432 2335666643
No 492
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.84 E-value=2.2e-05 Score=74.68 Aligned_cols=82 Identities=13% Similarity=0.175 Sum_probs=55.0
Q ss_pred cccccccccccceeeeEeecCC--CCeeEEEEc--CeeccCCcc-----------cCccceEEEeeCCceeeeeeEEEec
Q psy1672 261 SRYVEAVSSENATVVCRVDSIP--PAAISWYWN--GRLLLNNTA-----------FSSYQRIFVIEQGEYERKSSLVLTN 325 (600)
Q Consensus 261 ~~~~~v~~G~~v~L~C~v~g~P--~p~i~W~~~--g~~l~~~~~-----------~~~~~~~~~~~~g~~~~~s~L~I~~ 325 (600)
+..+.+..|+.++|.|.+.+.+ .+.+.|+++ +..+..... .....|+.+..+. ....+.|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~ 85 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLET-SATTAYLQINN 85 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEG-GGTEEEEEECS
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEec-CCCEEEEEECC
Confidence 4456788999999999999875 678999996 332210000 0011233333221 01235899999
Q ss_pred CCCCCCeEEEEEEecCCC
Q psy1672 326 AQESDSGRFYCVAENRAG 343 (600)
Q Consensus 326 v~~~d~G~Y~C~a~N~~G 343 (600)
++.+|+|.|+|.|.|..+
T Consensus 86 v~~~D~G~Y~C~~~~~~~ 103 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIV 103 (219)
T ss_dssp CCGGGCEEEEEEEEETTT
T ss_pred CCcccCEEEEEEEeccCc
Confidence 999999999999999874
No 493
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.83 E-value=3.1e-06 Score=79.21 Aligned_cols=117 Identities=11% Similarity=0.129 Sum_probs=87.7
Q ss_pred ccccCCCCCccEEEccCC-CCCCCC----ccccCCCCCCCEEEccCCCCCccC----cccccCCCCcceeeCCCCcCccc
Q psy1672 92 SGALDGLTNLIEIDLSDN-LLTSIP----SLTFQSVRFLRDLNLARNPISKIE----KGAFQFVPGLVKLDMSESRLEHI 162 (600)
Q Consensus 92 ~~~f~~l~~L~~L~Ls~N-~l~~l~----~~~f~~l~~L~~L~Ls~N~i~~l~----~~~~~~l~~L~~L~Ls~n~l~~i 162 (600)
...+...++|++|+|++| .|..-. ...+...++|++|+|++|.|.... ...+...++|++|+|++|.|...
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345778899999999999 887421 124556788999999999987532 23345567899999999999874
Q ss_pred C----hhhhcCCCCCCEEEc--CCCcCCCCCc----ccccccccccEEEccCCcCc
Q psy1672 163 S----PEAFTGAKSLESIKL--NGNRLSHFPV----RSVEPLLKLMMIELHDNPWV 208 (600)
Q Consensus 163 ~----~~~~~~l~~L~~L~L--s~N~l~~l~~----~~~~~l~~L~~L~l~~N~~~ 208 (600)
. ...+.....|+.|+| ++|.|..... ..+...+.|+.|++.+|.+.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3 345667789999999 8899886432 33445578999999998754
No 494
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=97.83 E-value=2.3e-05 Score=75.01 Aligned_cols=77 Identities=16% Similarity=0.360 Sum_probs=56.8
Q ss_pred cccccccceeeeEeecC-CC--CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 265 EAVSSENATVVCRVDSI-PP--AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~-P~--p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
.+..|+.++|.|.+.+. |. +.|.|++++..+.... ... ....++.+...+.|.|......|.|.|+|.|.|.
T Consensus 133 ~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~----~~~-~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~ 207 (220)
T 2fbj_H 133 PALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVN----FPP-ALASGGRYTMSNQLTLPAVECPEGESVKCSVQHD 207 (220)
T ss_dssp SSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEE----CCC-EECSSSCEEEEEEEEECGGGSCTTCEEEEEEEET
T ss_pred cccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEe----cCc-eECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcC
Confidence 45689999999999976 76 7999999886552100 111 1223455555678999999889999999999999
Q ss_pred CCcee
Q psy1672 342 AGIAD 346 (600)
Q Consensus 342 ~G~~~ 346 (600)
.|...
T Consensus 208 ~~~~~ 212 (220)
T 2fbj_H 208 SNPVQ 212 (220)
T ss_dssp TSCCE
T ss_pred CCceE
Confidence 98754
No 495
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=97.81 E-value=3.7e-05 Score=75.00 Aligned_cols=95 Identities=16% Similarity=0.272 Sum_probs=61.0
Q ss_pred ccccccccccccccccceeeeEeecCC-----CCeeEEEEcC--eec---cC-Cc--ccCccceEEEeeCCceeeeeeEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIP-----PAAISWYWNG--RLL---LN-NT--AFSSYQRIFVIEQGEYERKSSLV 322 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P-----~p~i~W~~~g--~~l---~~-~~--~~~~~~~~~~~~~g~~~~~s~L~ 322 (600)
.+...+..+.+..|+.++|.|.+.+.+ .+.|.|++++ ..+ .. .. ......++.+...+ ....|.
T Consensus 36 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L~ 112 (252)
T 3bkj_L 36 LMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSG---TDFTLR 112 (252)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET---TEEEEE
T ss_pred EEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccC---CEEEEE
Confidence 344446677889999999999999887 6899999953 111 00 00 00001233322211 234799
Q ss_pred EecCCCCCCeEEEEEEecCCCce-eEEEEEEE
Q psy1672 323 LTNAQESDSGRFYCVAENRAGIA-DANFTLQV 353 (600)
Q Consensus 323 I~~v~~~d~G~Y~C~a~N~~G~~-~~~v~L~V 353 (600)
|.+++.+|+|.|+|.|.|..+.. ...+.|.|
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V 144 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLEL 144 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEE
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEE
Confidence 99999999999999999986632 22234555
No 496
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.81 E-value=2.6e-05 Score=76.39 Aligned_cols=98 Identities=18% Similarity=0.310 Sum_probs=53.1
Q ss_pred ccccccccccccccccceeeeEeecCCCCeeEEEEc--CeeccCCcccC-----------ccceEEEeeCCceeeeeeEE
Q psy1672 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWN--GRLLLNNTAFS-----------SYQRIFVIEQGEYERKSSLV 322 (600)
Q Consensus 256 ~i~~~~~~~~v~~G~~v~L~C~v~g~P~p~i~W~~~--g~~l~~~~~~~-----------~~~~~~~~~~g~~~~~s~L~ 322 (600)
.+...+..+.+.+|+.++|.|.+.+.+.+.+.|++. +.......... ...+.....+. ......|.
T Consensus 4 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~ 82 (259)
T 3omz_A 4 NLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGS-TRKNLRMI 82 (259)
T ss_dssp -------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC---CCCEEE
T ss_pred ccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecC-CCCeEEEE
Confidence 344556678889999999999999988899999982 21110000000 00011111110 11245799
Q ss_pred EecCCCCCCeEEEEEEecCCCc---eeEEEEEEEE
Q psy1672 323 LTNAQESDSGRFYCVAENRAGI---ADANFTLQVT 354 (600)
Q Consensus 323 I~~v~~~d~G~Y~C~a~N~~G~---~~~~v~L~V~ 354 (600)
|.+++.+|+|.|+|.+.|..+. ....+.|.|.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~ 117 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVT 117 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEE
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEe
Confidence 9999999999999999998762 3333556554
No 497
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.81 E-value=2.5e-05 Score=83.03 Aligned_cols=77 Identities=19% Similarity=0.190 Sum_probs=58.6
Q ss_pred ccccccceeeeEeecCC----CCeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecC
Q psy1672 266 AVSSENATVVCRVDSIP----PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341 (600)
Q Consensus 266 v~~G~~v~L~C~v~g~P----~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~ 341 (600)
+..|+.++|.|.+.|.+ .+.|.|++++..+.... ........++.+...+.|.|.+++..|.|.|+|.|.|.
T Consensus 252 ~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~----~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~ 327 (444)
T 1igt_B 252 LMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQ----TQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNK 327 (444)
T ss_dssp HCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTT----CBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECT
T ss_pred eecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcc----cccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcC
Confidence 57899999999999874 35999999998765432 11112233444455678999999999999999999999
Q ss_pred CCcee
Q psy1672 342 AGIAD 346 (600)
Q Consensus 342 ~G~~~ 346 (600)
.|...
T Consensus 328 ~~~~~ 332 (444)
T 1igt_B 328 DLPAP 332 (444)
T ss_dssp TCSSC
T ss_pred CCCCc
Confidence 98763
No 498
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=97.81 E-value=2.2e-05 Score=74.36 Aligned_cols=74 Identities=16% Similarity=0.305 Sum_probs=53.3
Q ss_pred cccccceeeeEeecC-CC-CeeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCCCc
Q psy1672 267 VSSENATVVCRVDSI-PP-AAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGI 344 (600)
Q Consensus 267 ~~G~~v~L~C~v~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~G~ 344 (600)
..|+.++|.|.+.|. |+ +.|.|+++|+.+.... ..+.....++.+...+.|.|......|.|.|+|.|.|....
T Consensus 122 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~----~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 122 MAKDKVSLTCMITDFFPEDITVEWESNGQPAENYK----NTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp GSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEE----ECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred hcCCceEEEEEEeeEECCCCEEEEEECCEeccCcc----cCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 358999999999985 44 3899999998764321 11122334555566667888877777899999999998754
No 499
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.81 E-value=3.7e-05 Score=75.43 Aligned_cols=97 Identities=15% Similarity=0.267 Sum_probs=61.4
Q ss_pred cccccccccccccccccceeeeEeecCCCC-----eeEEEE--cCeeccC----Cc--ccCccceEEEeeCCceeeeeeE
Q psy1672 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPA-----AISWYW--NGRLLLN----NT--AFSSYQRIFVIEQGEYERKSSL 321 (600)
Q Consensus 255 p~i~~~~~~~~v~~G~~v~L~C~v~g~P~p-----~i~W~~--~g~~l~~----~~--~~~~~~~~~~~~~g~~~~~s~L 321 (600)
+.+...+..+.+..|+.++|.|.+.+.|.+ .+.|++ +++.+.. .. ......++.....+ ..+.|
T Consensus 122 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~L 198 (256)
T 1nqb_A 122 IELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSG---TDFTL 198 (256)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET---TEEEE
T ss_pred ccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccC---CEEEE
Confidence 334444566778899999999999988865 999999 5543310 00 00001222222111 23579
Q ss_pred EEecCCCCCCeEEEEEEecCCCce-eEEEEEEEE
Q psy1672 322 VLTNAQESDSGRFYCVAENRAGIA-DANFTLQVT 354 (600)
Q Consensus 322 ~I~~v~~~d~G~Y~C~a~N~~G~~-~~~v~L~V~ 354 (600)
.|.+++.+|+|.|+|.|.|..+.. .....|.|.
T Consensus 199 ~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 199 KISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 999999999999999999864322 223455553
No 500
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=97.80 E-value=1.3e-05 Score=77.28 Aligned_cols=82 Identities=16% Similarity=0.265 Sum_probs=53.5
Q ss_pred cccccccceeeeEeecC-CCC-eeEEEEcCeeccCCcccCccceEEEeeCCceeeeeeEEEecCCCCCCeEEEEEEecCC
Q psy1672 265 EAVSSENATVVCRVDSI-PPA-AISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342 (600)
Q Consensus 265 ~v~~G~~v~L~C~v~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~~g~~~~~s~L~I~~v~~~d~G~Y~C~a~N~~ 342 (600)
.+..|+.++|.|.+.|. |.+ .|.|++++..+.... ..... ..+.+...+.|.|..+...| |.|+|.|.|..
T Consensus 132 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~----~~~~~--~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~ 204 (227)
T 1mju_H 132 GDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT----FPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPA 204 (227)
T ss_dssp ------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE----CCCEE--ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGG
T ss_pred cccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEE----CCcee--cCCeEEEEEEEEEchhhcCC-CeEEEEEEECC
Confidence 35679999999999975 766 999999887542111 11111 22445556789999998878 99999999987
Q ss_pred CceeEEEEEEE
Q psy1672 343 GIADANFTLQV 353 (600)
Q Consensus 343 G~~~~~v~L~V 353 (600)
+.....+.+.+
T Consensus 205 ~~~~~~~~~~~ 215 (227)
T 1mju_H 205 SSTKVDKKIEP 215 (227)
T ss_dssp GTEEEEEECCC
T ss_pred CCcceEEEeCC
Confidence 76555444433
Done!