Your job contains 1 sequence.
>psy1672
MYLVIVFFVLVVSVSSCPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNN
LQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQ
SVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNG
NRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSG
KVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTA
FSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGL
PFLGGGHINGISLALFFLIILILIIIIYLLIRMRTITYPNSKNPAQIEVMANGNAHAVVN
KTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHSVINISNPDLINDTRKP
EGLSPEPHNDDVLFQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGELDDNYPPDYG
LPIVGQGQNELLPNNIHPNAKTLRVWQRGVPVLPPVNALKRVLSRGSPDEGYQEGSGTDV
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1672
(600 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015399 - symbol:kek1 "kekkon-1" species:7227 "Dro... 1044 3.4e-131 4
FB|FBgn0015400 - symbol:kek2 "kekkon-2" species:7227 "Dro... 646 4.0e-68 3
FB|FBgn0028370 - symbol:kek3 "kekkon-3" species:7227 "Dro... 671 1.9e-65 1
FB|FBgn0031016 - symbol:kek5 "kekkon5" species:7227 "Dros... 475 2.9e-44 1
FB|FBgn0032484 - symbol:kek4 "kekkon4" species:7227 "Dros... 418 9.2e-39 1
FB|FBgn0039862 - symbol:kek6 "kek6" species:7227 "Drosoph... 418 3.0e-38 1
UNIPROTKB|F1P2C4 - symbol:LRRC4C "Uncharacterized protein... 310 9.0e-27 1
UNIPROTKB|E2REC5 - symbol:LRRC4C "Uncharacterized protein... 320 7.3e-26 1
UNIPROTKB|F1SHH6 - symbol:LRRC4C "Uncharacterized protein... 321 2.0e-25 2
UNIPROTKB|F1MXH5 - symbol:LRRC4C "Uncharacterized protein... 320 2.7e-25 2
MGI|MGI:2442636 - symbol:Lrrc4c "leucine rich repeat cont... 320 2.7e-25 2
RGD|1311013 - symbol:Lrrc4c "leucine rich repeat containi... 320 2.7e-25 2
UNIPROTKB|Q9HCJ2 - symbol:LRRC4C "Leucine-rich repeat-con... 320 2.7e-25 2
UNIPROTKB|F1NTY3 - symbol:LRRC4C "Uncharacterized protein... 310 5.6e-25 1
UNIPROTKB|F1PZW2 - symbol:LRRC4B "Uncharacterized protein... 308 2.2e-24 1
UNIPROTKB|I3LJI7 - symbol:LRRC4B "Uncharacterized protein... 307 2.9e-24 1
UNIPROTKB|Q9NT99 - symbol:LRRC4B "Leucine-rich repeat-con... 306 3.7e-24 1
MGI|MGI:3027390 - symbol:Lrrc4b "leucine rich repeat cont... 305 4.7e-24 1
RGD|1307121 - symbol:Lrrc4b "leucine rich repeat containi... 305 4.7e-24 1
UNIPROTKB|E1BPK8 - symbol:LRRC4B "Uncharacterized protein... 305 4.7e-24 1
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 310 5.0e-24 1
ZFIN|ZDB-GENE-080327-25 - symbol:lrrc4ba "leucine rich re... 305 5.0e-24 1
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 309 6.5e-24 1
MGI|MGI:2442298 - symbol:Lingo2 "leucine rich repeat and ... 302 6.7e-24 1
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 308 7.8e-24 1
ZFIN|ZDB-GENE-050522-533 - symbol:lrrc4c "leucine rich re... 302 8.1e-24 1
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 308 8.4e-24 1
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 305 1.8e-23 1
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 305 1.8e-23 1
UNIPROTKB|A6NDA9 - symbol:LRIT2 "Leucine-rich repeat, imm... 296 2.3e-23 1
UNIPROTKB|Q7L985 - symbol:LINGO2 "Leucine-rich repeat and... 297 2.5e-23 1
ZFIN|ZDB-GENE-080327-5 - symbol:sc:d0316 "sc:d0316" speci... 296 3.6e-23 1
UNIPROTKB|E1C7Z9 - symbol:E1C7Z9 "Uncharacterized protein... 295 1.0e-22 3
MGI|MGI:1096866 - symbol:Chad "chondroadherin" species:10... 269 1.4e-22 1
UNIPROTKB|Q9HBW1 - symbol:LRRC4 "Leucine-rich repeat-cont... 291 1.4e-22 1
ZFIN|ZDB-GENE-091116-44 - symbol:lrrc4bb "leucine rich re... 298 1.7e-22 2
ZFIN|ZDB-GENE-080723-57 - symbol:lingo2 "leucine rich rep... 289 2.0e-22 1
RGD|1560026 - symbol:Lrrc4 "leucine rich repeat containin... 289 2.4e-22 1
UNIPROTKB|Q9BZR6 - symbol:RTN4R "Reticulon-4 receptor" sp... 284 2.8e-22 1
RGD|2336 - symbol:Chad "chondroadherin" species:10116 "Ra... 265 3.8e-22 1
UNIPROTKB|O15335 - symbol:CHAD "Chondroadherin" species:9... 265 3.8e-22 1
MGI|MGI:2182081 - symbol:Lrrc4 "leucine rich repeat conta... 287 3.9e-22 1
ZFIN|ZDB-GENE-010306-4 - symbol:slit3 "slit (Drosophila) ... 292 4.8e-22 1
UNIPROTKB|Q27972 - symbol:CHAD "Chondroadherin" species:9... 264 1.5e-21 1
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 277 3.3e-21 2
MGI|MGI:2141485 - symbol:Lrtm2 "leucine-rich repeats and ... 265 3.8e-21 1
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 292 4.0e-21 2
ZFIN|ZDB-GENE-050522-160 - symbol:lrit2 "leucine-rich rep... 278 4.0e-21 2
ZFIN|ZDB-GENE-060503-496 - symbol:lrrc24 "leucine rich re... 262 5.1e-21 2
RGD|620810 - symbol:Rtn4r "reticulon 4 receptor" species:... 271 8.8e-21 1
UNIPROTKB|I3LDA4 - symbol:PXDN "Uncharacterized protein" ... 283 1.1e-20 2
UNIPROTKB|F1Q057 - symbol:PXDN "Uncharacterized protein" ... 282 1.3e-20 2
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 279 1.3e-20 2
UNIPROTKB|Q6UXM1 - symbol:LRIG3 "Leucine-rich repeats and... 270 1.3e-20 2
UNIPROTKB|Q50LG9 - symbol:LRRC24 "Leucine-rich repeat-con... 269 2.0e-20 1
ZFIN|ZDB-GENE-041210-129 - symbol:lrrc4.1 "leucine rich r... 273 2.5e-20 1
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 276 2.7e-20 1
ZFIN|ZDB-GENE-080327-16 - symbol:lingo1a "leucine rich re... 261 2.7e-20 2
ZFIN|ZDB-GENE-040426-1130 - symbol:chad "chondroadherin" ... 258 2.8e-20 1
MGI|MGI:1916925 - symbol:Pxdn "peroxidasin homolog (Droso... 279 3.1e-20 2
MGI|MGI:1315205 - symbol:Slit2 "slit homolog 2 (Drosophil... 276 3.6e-20 2
UNIPROTKB|O94813 - symbol:SLIT2 "Slit homolog 2 protein" ... 277 3.6e-20 2
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 265 3.8e-20 2
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 271 4.0e-20 3
UNIPROTKB|F1MLJ7 - symbol:SLIT2 "Uncharacterized protein"... 274 4.8e-20 2
UNIPROTKB|F1NN41 - symbol:PXDN "Uncharacterized protein" ... 276 6.1e-20 2
UNIPROTKB|O94898 - symbol:LRIG2 "Leucine-rich repeats and... 269 8.0e-20 2
UNIPROTKB|Q92626 - symbol:PXDN "Peroxidasin homolog" spec... 275 8.9e-20 2
UNIPROTKB|F1RHM5 - symbol:RTN4R "Uncharacterized protein"... 260 1.6e-19 1
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 280 2.3e-19 2
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 276 2.5e-19 2
MGI|MGI:2136886 - symbol:Rtn4r "reticulon 4 receptor" spe... 258 2.7e-19 1
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 266 3.7e-19 2
UNIPROTKB|G3MXX5 - symbol:RTN4R "Uncharacterized protein"... 256 4.5e-19 1
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 277 5.0e-19 2
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 277 5.0e-19 2
UNIPROTKB|E1C0J7 - symbol:PXDNL "Uncharacterized protein"... 274 5.4e-19 2
UNIPROTKB|E1C0J1 - symbol:PXDNL "Uncharacterized protein"... 274 5.5e-19 2
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 264 5.6e-19 1
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 258 5.7e-19 1
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 258 5.9e-19 1
UNIPROTKB|F1PKU2 - symbol:PXDNL "Uncharacterized protein"... 267 8.0e-19 2
UNIPROTKB|F1PGX0 - symbol:LINGO1 "Uncharacterized protein... 256 9.7e-19 1
RGD|1308668 - symbol:Lingo1 "leucine rich repeat and Ig d... 254 1.0e-18 1
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 273 1.1e-18 2
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 273 1.1e-18 2
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 255 1.3e-18 1
MGI|MGI:2444885 - symbol:Lrit2 "leucine-rich repeat, immu... 253 1.6e-18 1
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 254 1.6e-18 1
MGI|MGI:3605040 - symbol:Lrrc24 "leucine rich repeat cont... 245 1.6e-18 2
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 254 1.6e-18 1
UNIPROTKB|Q50L44 - symbol:LINGO1 "Leucine-rich repeat and... 258 2.6e-18 2
UNIPROTKB|Q8N967 - symbol:LRTM2 "Leucine-rich repeat and ... 244 2.8e-18 1
MGI|MGI:3609246 - symbol:Lingo3 "leucine rich repeat and ... 251 3.1e-18 1
UNIPROTKB|A1KZ92 - symbol:PXDNL "Peroxidasin-like protein... 257 3.1e-18 1
MGI|MGI:106036 - symbol:Lrrn3 "leucine rich repeat protei... 252 3.6e-18 1
UNIPROTKB|P0C6S8 - symbol:LINGO3 "Leucine-rich repeat and... 250 4.1e-18 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 239 5.1e-18 2
RGD|71066 - symbol:Lrrn3 "leucine rich repeat neuronal 3"... 249 7.6e-18 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 238 8.3e-18 2
WARNING: Descriptions of 726 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015399 [details] [associations]
symbol:kek1 "kekkon-1" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0048477
"oogenesis" evidence=IMP] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway"
evidence=IGI;IMP;TAS] [GO:0005154 "epidermal growth factor receptor
binding" evidence=IPI] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity"
evidence=IDA;TAS] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0048019 "receptor
antagonist activity" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0022008 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0048477 GO:GO:0000910 GO:GO:0048019 InterPro:IPR013098
Pfam:PF07679 MEROPS:I43.001 GO:GO:0007175 HSSP:P07359 EMBL:U42767
ProteinModelPortal:P91643 SMR:P91643 STRING:P91643 PRIDE:P91643
FlyBase:FBgn0015399 InParanoid:P91643 OrthoDB:EOG48932C
ArrayExpress:P91643 Bgee:P91643 Uniprot:P91643
Length = 880
Score = 1044 (372.6 bits), Expect = 3.4e-131, Sum P(4) = 3.4e-131
Identities = 209/416 (50%), Positives = 273/416 (65%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
C + C CKWKGGKQ +EC D+ LI IPE + TQVLDMSGN LQ L E F RA LLN
Sbjct: 90 CQTVCACKWKGGKQTVECIDRHLIQIPEHIDPN-TQVLDMSGNKLQTLSNEQFIRANLLN 148
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQKL+L C IG+I+ GLTNL+E+DLS NLL ++PSL + LR+L LA N I
Sbjct: 149 LQKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNHIH 208
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
KIE AF P L KLD+S ++ IS +AF G + L ++LNGN+LS +++E L +
Sbjct: 209 KIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLPKTIETLSR 268
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNVP--VQPACTG-PERLSGKVFSDLHADDFAC 253
L IELHDNPW+CDC +R K+WL K+N+P V P C+G PER+ + F+DLH D+FAC
Sbjct: 269 LHGIELHDNPWLCDCRLRDTKLWLM-KRNIPYPVAPVCSGGPERIIDRSFADLHVDEFAC 327
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQ- 312
+PE+ S YVEA ENA++ CR ++P A I+WYWNGRLL NN+AF++YQRI ++EQ
Sbjct: 328 RPEMLPISHYVEAAMGENASITCRARAVPAANINWYWNGRLLANNSAFTAYQRIHMLEQV 387
Query: 313 -GEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFLGGGHINGX 371
G +E++S LVLTNAQE+DS FYCVAENRAG+A+ANFTL V+ R G+ LG G I G
Sbjct: 388 EGGFEKRSKLVLTNAQETDSSEFYCVAENRAGMAEANFTLHVSMRAAGMASLGSGQIVGL 447
Query: 372 XXXXXXXXXXXXXXXXXXXXRMRTITYPNSKNPAQIEVMANGN-AHAVVNKTPSLT 426
R++ Y +SK P +EV+ + N +++ NKT T
Sbjct: 448 SAALVALIVFALGVIMCLLLRVKRQPYVDSKTPNHMEVITSVNHQNSITNKTQPAT 503
Score = 185 (70.2 bits), Expect = 3.4e-131, Sum P(4) = 3.4e-131
Identities = 40/63 (63%), Positives = 43/63 (68%)
Query: 542 PIVGQGQNELLPNNIHPNAKTLRVWQRG-VPVLPPVNALKRVL---SRGSPDEGYQEGSG 597
P +LPN NAKT+RVWQ+G VPVLPPV ALKR L SR SPDEGYQEG G
Sbjct: 818 PSTSSSSCSILPNGQPINAKTIRVWQKGGVPVLPPVTALKRALISSSRNSPDEGYQEGCG 877
Query: 598 TDV 600
TDV
Sbjct: 878 TDV 880
Score = 55 (24.4 bits), Expect = 3.4e-131, Sum P(4) = 3.4e-131
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 494 FQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGELDDNYPPDYGLPIVGQGQNE 550
F + +++Q + G ++ + + +S GG YP DYGLP+V +++
Sbjct: 690 FSKTFPRSHLQQGMMTGGGGGTSTASTVTTNLS-GGS-SSGYPNDYGLPLVPGAEHQ 744
Score = 49 (22.3 bits), Expect = 3.4e-131, Sum P(4) = 3.4e-131
Identities = 8/11 (72%), Positives = 11/11 (100%)
Query: 469 SNPDLINDTRK 479
+NPDLINDT++
Sbjct: 596 NNPDLINDTKR 606
Score = 43 (20.2 bits), Expect = 6.1e-130, Sum P(4) = 6.1e-130
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 491 DVLFQNNYWNQNIRQPTNS--ELGFDS-NDKTPIIDGVSI 527
D L+ + W T S +L DKTPIID +
Sbjct: 638 DSLYPSGLWEHGAPVGTTSADDLFMKRYTDKTPIIDSTQL 677
Score = 37 (18.1 bits), Expect = 2.6e-129, Sum P(4) = 2.6e-129
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 518 KTPIIDGVSIGG 529
K P I GV +GG
Sbjct: 616 KIPPISGVGVGG 627
>FB|FBgn0015400 [details] [associations]
symbol:kek2 "kekkon-2" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:Q9BZR6
GeneTree:ENSGT00700000104028 FlyBase:FBgn0015400 EMBL:BT120011
RefSeq:NP_523551.1 UniGene:Dm.2402 SMR:Q9VKG1 MINT:MINT-1619269
STRING:Q9VKG1 EnsemblMetazoa:FBtr0080252 GeneID:34582
KEGG:dme:Dmel_CG4977 UCSC:CG4977-RA CTD:34582 InParanoid:Q9VKG1
OMA:DSPDEGY GenomeRNAi:34582 NextBio:789152 Uniprot:Q9VKG1
Length = 894
Score = 646 (232.5 bits), Expect = 4.0e-68, Sum P(3) = 4.0e-68
Identities = 133/343 (38%), Positives = 197/343 (57%)
Query: 18 PSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNL 77
P C+CKWKGGKQ +EC + L +PE + TQVL+ SGN LQ+L E F R LLNL
Sbjct: 22 PEVCVCKWKGGKQTVECGGQQLSNLPEGMDPG-TQVLNFSGNALQVLQSERFLRMDLLNL 80
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
QK++L+R + +I A GLTNL+E+DLS+N L ++PS TFQ L L+L+ NPI +
Sbjct: 81 QKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDYSSLMRLSLSGNPIRE 140
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKL 197
++ AF+ + L L++S ++E I EAF G +LE ++L+GNR+ + P L
Sbjct: 141 LKTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNRIGFIQGTHILPK-SL 199
Query: 198 MMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLSGKVFSDLHADDFACKP 255
I LH N W CDC + I WL + N P+ +P C P RL G+V L + AC P
Sbjct: 200 HGISLHSNRWNCDCRLLDIHFWLVNY-NTPLAEEPKCMEPARLKGQVIKSLQREQLACLP 258
Query: 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQ--- 312
E+ S Y E N ++ C V +IP + W +NG+++ N++ + + I++
Sbjct: 259 EVSPQSSYTEVSEGRNMSITCLVRAIPEPKVLWLFNGQVMSNDSLMDNLHMYYYIDETIG 318
Query: 313 --GEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
G E++S + + N D+G F CV +N AG +N+TL+V
Sbjct: 319 VSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIAGTTFSNYTLRV 361
Score = 39 (18.8 bits), Expect = 4.0e-68, Sum P(3) = 4.0e-68
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 398 YPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHSTEMISP 453
Y +++P + +A AVV P T + T S T P +E SP
Sbjct: 793 YRFAQSPTSLPAVATPPPAAVVATPPPPTSAVSTQS-TATSTIP--ELDESEASSP 845
Score = 38 (18.4 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 6/7 (85%), Positives = 7/7 (100%)
Query: 470 NPDLIND 476
NPDL+ND
Sbjct: 546 NPDLVND 552
Score = 37 (18.1 bits), Expect = 4.0e-68, Sum P(3) = 4.0e-68
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 587 SPDEGYQEGSGTD 599
SPDEGY G G +
Sbjct: 879 SPDEGYV-GDGQE 890
>FB|FBgn0028370 [details] [associations]
symbol:kek3 "kekkon-3" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005887 "integral
to plasma membrane" evidence=ISM] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
GeneTree:ENSGT00700000104028 KO:K07523 HSSP:P13596 EMBL:BT044530
RefSeq:NP_001162986.1 RefSeq:NP_523575.1 UniGene:Dm.21548
SMR:Q9V430 IntAct:Q9V430 MINT:MINT-324955
EnsemblMetazoa:FBtr0080752 EnsemblMetazoa:FBtr0300848 GeneID:34912
KEGG:dme:Dmel_CG4192 UCSC:CG4192-RA CTD:34912 FlyBase:FBgn0028370
InParanoid:Q9V430 OMA:KMKETCD OrthoDB:EOG4P2NH5 GenomeRNAi:34912
NextBio:790842 Uniprot:Q9V430
Length = 1021
Score = 671 (241.3 bits), Expect = 1.9e-65, P = 1.9e-65
Identities = 147/361 (40%), Positives = 208/361 (57%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C CKWK GK+ + C + L IP+ P TQ+LD+SGN +Q++P ++F A LLN
Sbjct: 79 CPAVCECKWKSGKESVLCLNANLTHIPQ-PLDAGTQLLDLSGNEIQLIPDDSFATAQLLN 137
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQK++LARCH+ I+ A L NL+E+DLS NLL++IPSL V LR+L L+ NPI
Sbjct: 138 LQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPIL 197
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS-LESIKLNGNRLSHFPVRSVEPLL 195
++ AF VP LVKL++S+ RL HI+ AF G +S LE +KL+GNRLS ++ L
Sbjct: 198 RVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEVRSGTITSLA 257
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVP--VQPACTGPERLSGKVFSDLHADDFAC 253
L +EL N W C C++R ++ W+ ++N+P + P C P RLSG+ + L DDFAC
Sbjct: 258 SLHGLELARNTWNCSCSLRPLRAWML-QQNIPSGIPPTCESPPRLSGRAWDKLDVDDFAC 316
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTA-----FSSYQRIF 308
P+I V N T+ C V+ +P A+ W RL+ N +A S R
Sbjct: 317 VPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIANLSAGGDGDSDSEPRTA 376
Query: 309 VIEQGE--Y-----ERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
QG Y S+L + A D+G + C AEN+AG +A+ TL V+ R P
Sbjct: 377 AATQGRKTYVVNMLRNASNLTILTADMQDAGIYTCAAENKAGKVEASVTLAVSRRPPEAP 436
Query: 362 F 362
+
Sbjct: 437 W 437
>FB|FBgn0031016 [details] [associations]
symbol:kek5 "kekkon5" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030510 "regulation of BMP signaling pathway" evidence=IDA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030510 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:Q10466 FlyBase:FBgn0031016
EMBL:BT023770 RefSeq:NP_001245746.1 RefSeq:NP_573382.1
RefSeq:NP_728242.1 RefSeq:NP_728243.1 UniGene:Dm.33776 SMR:Q9VWI6
MINT:MINT-297003 EnsemblMetazoa:FBtr0074707
EnsemblMetazoa:FBtr0074708 EnsemblMetazoa:FBtr0309223
EnsemblMetazoa:FBtr0309224 GeneID:32930 KEGG:dme:Dmel_CG12199
UCSC:CG12199-RA CTD:32930 InParanoid:Q9VWI6 OMA:YDNLGLR
GenomeRNAi:32930 NextBio:781084 Uniprot:Q9VWI6
Length = 931
Score = 475 (172.3 bits), Expect = 2.9e-44, P = 2.9e-44
Identities = 112/345 (32%), Positives = 180/345 (52%)
Query: 20 TCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQK 79
TC C+W GK+ +C++K L IP+ +E+ QVLD + N + L +E F AGL N+ K
Sbjct: 45 TCHCQWNSGKKSADCKNKALTKIPQDMSNEM-QVLDFAHNQIPELRREEFLLAGLPNVHK 103
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
+FL C I ++ A GL LIE+DLS N + + TF + LR++ + N I +
Sbjct: 104 IFLRNCTIQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLEKLRNVIINNNEIEVLP 163
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
F + L +++ +RL + F G +L +I L NRLSH + + L KLM
Sbjct: 164 NHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAISLEQNRLSHLHKETFKDLQKLMH 223
Query: 200 IELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRM 259
+ L N W C C ++ + + K+ C P +L GK++S++ +++FAC+P I
Sbjct: 224 LSLQGNAWNCSCELQDFRDFAISKRLYTPPTDCQEPPQLRGKLWSEVPSENFACRPRILG 283
Query: 260 DSR-YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNT----AFSSYQRIFVIEQGE 314
R ++EA + +N ++ CR+ P ++W +N R L +S +++ EQ
Sbjct: 284 SVRSFIEA-NHDNISLPCRIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSVEQM--PEQPS 340
Query: 315 YERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT--YRG 357
S L + + SD G + CVA+NR G A+A F L V+ Y G
Sbjct: 341 QVLTSELRIVGVRASDKGAYTCVADNRGGRAEAEFQLLVSGDYAG 385
>FB|FBgn0032484 [details] [associations]
symbol:kek4 "kekkon4" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:P13596 FlyBase:FBgn0032484
EMBL:AF507920 RefSeq:NP_609615.2 UniGene:Dm.417 SMR:Q9VK22
EnsemblMetazoa:FBtr0080485 GeneID:34718 KEGG:dme:Dmel_CG9431
UCSC:CG9431-RA CTD:34718 InParanoid:Q9VK22 OMA:PRIPEDI
GenomeRNAi:34718 NextBio:789865 Uniprot:Q9VK22
Length = 649
Score = 418 (152.2 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 110/338 (32%), Positives = 174/338 (51%)
Query: 21 CICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKL 80
C CKW GK+ +CR+ L +PE E+ QVLD+S N++ L + AF L NLQKL
Sbjct: 45 CHCKWNSGKKTADCRNLSLSGVPEYLSPEV-QVLDLSHNHIFYLEENAFLTTHLQNLQKL 103
Query: 81 FLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEK 140
+ + ++ + L LIE+DLS+NLL + F + +R + L N + +
Sbjct: 104 LIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAIFLNGNLLQALRH 163
Query: 141 GAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMI 200
G F+ + L K+++ +RL I +AF G L I L+ N L+ V S + L KL +
Sbjct: 164 GVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVESFQDLTKLTAL 223
Query: 201 ELHDNPWVCDCNMRSIKMWLADKKNVPVQP-ACTGPERLSGKVFSDLHADDFACKPEIRM 259
L +NPW C C+++ + ++ N+ P +C P +L G+++ + + FACKP+I
Sbjct: 224 SLVENPWNCTCDLQMFRDFVIGM-NLYTPPTSCHYPLQLRGRLWIEDQPEAFACKPKIVY 282
Query: 260 DSRYVEA-VSSENATVVCRVDSIPPAAISW-YWNGRLLLNNTAFSSYQ--RIFV--IEQG 313
+ S EN T++CRV P I+W Y N + S Q RI++ + +
Sbjct: 283 PTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSLQKQRIYIELLRED 342
Query: 314 EYE-RK-------SSLVLTNAQESDSGRFYCVAENRAG 343
E + RK S L + NA++SD G + C+AEN G
Sbjct: 343 ESKIRKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGG 380
>FB|FBgn0039862 [details] [associations]
symbol:kek6 "kek6" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 GO:GO:0046331 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 EMBL:BT100194
RefSeq:NP_651880.1 UniGene:Dm.24119 SMR:Q9V9V6
EnsemblMetazoa:FBtr0085821 GeneID:43729 KEGG:dme:Dmel_CG1804
UCSC:CG1804-RA CTD:43729 FlyBase:FBgn0039862 eggNOG:NOG238103
InParanoid:Q9V9V6 OMA:MGRRITA OrthoDB:EOG4S1RQ2 GenomeRNAi:43729
NextBio:835480 Uniprot:Q9V9V6
Length = 836
Score = 418 (152.2 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 98/340 (28%), Positives = 156/340 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
C S C CKW GK+ C L TIP +EL QVL ++ N++ L +E F GLLN
Sbjct: 38 CASNCTCKWTNGKKSAICSSLQLTTIPNTLSTEL-QVLVLNDNHIPYLNREEFSTLGLLN 96
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ+++L + + I + L L+EIDLSDN L + TF LR L L NP+
Sbjct: 97 LQRIYLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLRILYLNGNPLK 156
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ F +P L LDM + + +I P + LE + L N L + +
Sbjct: 157 RLAAYQFPILPHLRTLDMHDCLISYIDPMSLANLNLLEFLNLKNNLLESLSEYVFQHMAN 216
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE 256
L + L +NPW C+C +R + W + + V C GP + + + + F C P
Sbjct: 217 LKTLSLEENPWQCNCKLRKFRGWYVNSRLSSVSLVCKGPPAQKDRTWDSVDDELFGCPPR 276
Query: 257 IRM-DSRYVEAVS-SENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGE 314
+ + ++ V+ + N T C V P ++W NG++L N+ + I
Sbjct: 277 VEIFNNEEVQNIDIGSNTTFSCLVYGDPLPEVAWELNGKILDNDNVLFESESI-----AS 331
Query: 315 YERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+ S+L + N D+G + C N G N ++ ++
Sbjct: 332 DKLWSNLTVFNVTSLDAGTYACTGSNSIGSMTQNISIYLS 371
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 310 (114.2 bits), Expect = 9.0e-27, P = 9.0e-27
Identities = 101/331 (30%), Positives = 159/331 (48%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R + +L++L L +
Sbjct: 106 LELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRLS 163
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L+ L IP+LT V+ L +L+L+ N ++ I G+FQ +
Sbjct: 164 YISEGAFEGLSNLRYLNLAMCNLREIPNLT-PLVK-LDELDLSGNHLTAIRPGSFQGLMH 221
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M +S+++ I AF +SL I L N L+ P PL +L I LH NPW
Sbjct: 222 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL-RLERIHLHHNPWN 280
Query: 209 CDCNMRSIKMWLADK--KNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVE 265
C+C++ + W+ DK N C P L G+ +L + F C P I +
Sbjct: 281 CNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPADLN 340
Query: 266 AVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSLVL 323
A + CR S ++SW NG ++ + +Y+ RI V+ G +L
Sbjct: 341 VTEGMAAEMKCRA-STSLTSVSWITPNGSVMTHG----AYRVRIAVLSDG------TLNF 389
Query: 324 TNAQESDSGRFYCVAENRAGIADANFTLQVT 354
T D+G + C+ N G A+ TL VT
Sbjct: 390 TKVTVQDTGLYTCMVSNSVGNTTASATLNVT 420
Score = 256 (95.2 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+ L +
Sbjct: 24 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTN-TRLLNLHENQIQIIKVNSFKH--LRH 78
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GL NL ++L DN LT+IP+ F + L++L L NPI
Sbjct: 79 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 138
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 139 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLV 196
Query: 196 KLMMIELHDN 205
KL ++L N
Sbjct: 197 KLDELDLSGN 206
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 48/154 (31%), Positives = 83/154 (53%)
Query: 31 WMECRDKFLITIPEAPESELTQV--LDMSG-NNLQILPKEAFRRAGLLNLQKLFLARCHI 87
W+ R+ + +IP + + + LD+ L + + AF GL NL+ L LA C++
Sbjct: 131 WL--RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFE--GLSNLRYLNLAMCNL 186
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP 147
+I + L L L E+DLS N LT+I +FQ + L+ L + ++ I IE+ AF +
Sbjct: 187 REIPN--LTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 244
Query: 148 GLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
LV+++++ + L + + FT + LE I L+ N
Sbjct: 245 SLVEINLAHNNLTLLPHDLFTPLR-LERIHLHHN 277
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 320 (117.7 bits), Expect = 7.3e-26, P = 7.3e-26
Identities = 99/329 (30%), Positives = 155/329 (47%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R + +L++L L +
Sbjct: 129 LELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRLS 186
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L+ L IP+LT ++ L +L+L+ N +S I G+FQ +
Sbjct: 187 YISEGAFEGLSNLRYLNLAMCNLREIPNLT-PLIK-LDELDLSGNHLSAIRPGSFQGLMH 244
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M +S+++ I AF +SL I L N L+ P PL L I LH NPW
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 304
Query: 209 CDCNMRSIKMWLADK--KNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVE 265
C+C++ + W+ D N C P L G+ +L + F C P I +
Sbjct: 305 CNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLN 364
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A + CR S ++SW ++ + A+ RI V+ G +L TN
Sbjct: 365 VTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKV--RIAVLSDG------TLNFTN 415
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVT 354
D+G + C+ N G A+ TL VT
Sbjct: 416 VTVQDTGMYTCMVSNSVGNTTASATLNVT 444
Score = 257 (95.5 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+ L +
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTN-TRLLNLHENQIQIIKVNSFKH--LRH 101
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GL NL ++L DN LT+IP+ F + L++L L NPI
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 161
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 162 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLI 219
Query: 196 KLMMIELHDN 205
KL ++L N
Sbjct: 220 KLDELDLSGN 229
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 107/422 (25%), Positives = 173/422 (40%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++L +S N+++ + AF GL NL L L + I +GA L+ L E+ L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAFN--GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 112 TSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
SIPS F + LR L+L +S I +GAF+ + L L+++ L I P T
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN-LTPL 218
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLL---KLMMIELHDNPWVCDC--NMRS-IKMWLADKK 224
L+ + L+GN LS S + L+ KL MI+ + N++S +++ LA
Sbjct: 219 IKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN- 277
Query: 225 NVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPP 283
N+ + P P ++ LH + + C +I S +++ ++ N T C + PP
Sbjct: 278 NLTLLPHDLFTPLHHLERIH--LHHNPWNCNCDILWLSWWIKDMAPSN-TACCARCNTPP 334
Query: 284 AAISWYWNGRLLLNNTAFSSYQRIFV-------IEQG---EYERKSSLVLTNAQE-SDSG 332
Y G L + F+ Y + V + +G E + ++S LT+ + +G
Sbjct: 335 NLKGRYI-GEL--DQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNG 391
Query: 333 RFYCVAENRAGIA---DA--NFTLQVTYRGVGLPFLGGGHINGXXXXXXXXXXXXXXXXX 387
+ IA D NFT VT + G+ N
Sbjct: 392 TVMTHGAYKVRIAVLSDGTLNFT-NVTVQDTGMYTCMVS--NSVGNTTASATLNVTAATT 448
Query: 388 XXXXRMRTITYPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHS 447
T+T + P+Q E N N P TPVI+ + P S S
Sbjct: 449 TPFSYFSTVTV-ETMEPSQDEARTTDN-----NVGP--TPVIDWETTNVTTSLTPQSTRS 500
Query: 448 TE 449
TE
Sbjct: 501 TE 502
Score = 48 (22.0 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 489 NDDVLFQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGELDDNYPPDYGLPIV 544
N D+L+ + +W +++ P+N+ N P + G IG ELD NY Y P++
Sbjct: 306 NCDILWLS-WWIKDMA-PSNTACCARCNTP-PNLKGRYIG-ELDQNYFTCYA-PVI 356
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 321 (118.1 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 100/329 (30%), Positives = 155/329 (47%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R + +L++L L +
Sbjct: 129 LELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRLS 186
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L+ L IP+LT V+ L +L+L+ N +S I G+FQ +
Sbjct: 187 YISEGAFEGLSNLRYLNLAMCNLREIPNLT-PLVK-LDELDLSGNHLSAIRPGSFQGLMH 244
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M +S+++ I AF +SL I L N L+ P PL L I LH NPW
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 304
Query: 209 CDCNMRSIKMWLADK--KNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVE 265
C+C++ + W+ D N C P L G+ +L + F C P I +
Sbjct: 305 CNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLN 364
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A + CR S ++SW ++ + A+ RI V+ G +L TN
Sbjct: 365 VTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKV--RIAVLSDG------TLNFTN 415
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVT 354
D+G + C+ N G A+ TL VT
Sbjct: 416 VTVQDTGMYTCMVSNSVGNTTASATLNVT 444
Score = 256 (95.2 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+ L +
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTN-TRLLNLHENQIQIIKVNSFKH--LRH 101
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GL NL ++L DN LT+IP+ F + L++L L NPI
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 161
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 162 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLV 219
Query: 196 KLMMIELHDN 205
KL ++L N
Sbjct: 220 KLDELDLSGN 229
Score = 151 (58.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 107/422 (25%), Positives = 173/422 (40%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++L +S N+++ + AF GL NL L L + I +GA L+ L E+ L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAFN--GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 112 TSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
SIPS F + LR L+L +S I +GAF+ + L L+++ L I P T
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN-LTPL 218
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLL---KLMMIELHDNPWVCDC--NMRS-IKMWLADKK 224
L+ + L+GN LS S + L+ KL MI+ + N++S +++ LA
Sbjct: 219 VKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN- 277
Query: 225 NVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPP 283
N+ + P P ++ LH + + C +I S +++ ++ N T C + PP
Sbjct: 278 NLTLLPHDLFTPLHHLERIH--LHHNPWNCNCDILWLSWWIKDMAPSN-TACCARCNTPP 334
Query: 284 AAISWYWNGRLLLNNTAFSSYQRIFV-------IEQG---EYERKSSLVLTNAQE-SDSG 332
Y G L + F+ Y + V + +G E + ++S LT+ + +G
Sbjct: 335 NLKGRYI-GEL--DQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNG 391
Query: 333 RFYCVAENRAGIA---DA--NFTLQVTYRGVGLPFLGGGHINGXXXXXXXXXXXXXXXXX 387
+ IA D NFT VT + G+ N
Sbjct: 392 TVMTHGAYKVRIAVLSDGTLNFT-NVTVQDTGMYTCMVS--NSVGNTTASATLNVTAATT 448
Query: 388 XXXXRMRTITYPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHS 447
T+T + P+Q E N N P TPVI+ + P S S
Sbjct: 449 TPFSYFSTVTV-ETMEPSQDEARTTDN-----NVGP--TPVIDWETTNVTTSLTPQSTRS 500
Query: 448 TE 449
TE
Sbjct: 501 TE 502
Score = 48 (22.0 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 489 NDDVLFQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGELDDNYPPDYGLPIV 544
N D+L+ + +W +++ P+N+ N P + G IG ELD NY Y P++
Sbjct: 306 NCDILWLS-WWIKDMA-PSNTACCARCNTP-PNLKGRYIG-ELDQNYFTCYA-PVI 356
Score = 37 (18.1 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 427 PVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHS--VINISNPDLINDTR 478
P IE + P H+T + + N + ++H +I +++ D + +T+
Sbjct: 588 PAIEHEHLNHYNSYKSPFNHTTTVNTINSI--HSSVHEPLLIRMNSKDNVQETQ 639
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 320 (117.7 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 99/329 (30%), Positives = 155/329 (47%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R + +L++L L +
Sbjct: 129 LELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRLS 186
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L+ L IP+LT ++ L +L+L+ N +S I G+FQ +
Sbjct: 187 YISEGAFEGLSNLRYLNLAMCNLREIPNLT-PLIK-LDELDLSGNHLSAIRPGSFQGLMH 244
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M +S+++ I AF +SL I L N L+ P PL L I LH NPW
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 304
Query: 209 CDCNMRSIKMWLADK--KNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVE 265
C+C++ + W+ D N C P L G+ +L + F C P I +
Sbjct: 305 CNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLN 364
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A + CR S ++SW ++ + A+ RI V+ G +L TN
Sbjct: 365 VTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKV--RIAVLSDG------TLNFTN 415
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVT 354
D+G + C+ N G A+ TL VT
Sbjct: 416 VTVQDTGMYTCMVSNSVGNTTASATLNVT 444
Score = 257 (95.5 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+ L +
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTN-TRLLNLHENQIQIIKVNSFKH--LRH 101
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GL NL ++L DN LT+IP+ F + L++L L NPI
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 161
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 162 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLI 219
Query: 196 KLMMIELHDN 205
KL ++L N
Sbjct: 220 KLDELDLSGN 229
Score = 150 (57.9 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 107/422 (25%), Positives = 173/422 (40%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++L +S N+++ + AF GL NL L L + I +GA L+ L E+ L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAFN--GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 112 TSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
SIPS F + LR L+L +S I +GAF+ + L L+++ L I P T
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN-LTPL 218
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLL---KLMMIELHDNPWVCDC--NMRS-IKMWLADKK 224
L+ + L+GN LS S + L+ KL MI+ + N++S +++ LA
Sbjct: 219 IKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN- 277
Query: 225 NVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPP 283
N+ + P P ++ LH + + C +I S +++ ++ N T C + PP
Sbjct: 278 NLTLLPHDLFTPLHHLERIH--LHHNPWNCNCDILWLSWWIKDMAPSN-TACCARCNTPP 334
Query: 284 AAISWYWNGRLLLNNTAFSSYQRIFV-------IEQG---EYERKSSLVLTNAQE-SDSG 332
Y G L + F+ Y + V + +G E + ++S LT+ + +G
Sbjct: 335 NLKGRYI-GEL--DQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNG 391
Query: 333 RFYCVAENRAGIA---DA--NFTLQVTYRGVGLPFLGGGHINGXXXXXXXXXXXXXXXXX 387
+ IA D NFT VT + G+ N
Sbjct: 392 TVMTHGAYKVRIAVLSDGTLNFT-NVTVQDTGMYTCMVS--NSVGNTTASATLNVTAATT 448
Query: 388 XXXXRMRTITYPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHS 447
T+T + P+Q E N N P TPVI+ + P S S
Sbjct: 449 TPFSYFSTVTV-ETMEPSQDEARTTDN-----NVGP--TPVIDWETTNVTTSLTPQSTRS 500
Query: 448 TE 449
TE
Sbjct: 501 TE 502
Score = 48 (22.0 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 489 NDDVLFQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGELDDNYPPDYGLPIV 544
N D+L+ + +W +++ P+N+ N P + G IG ELD NY Y P++
Sbjct: 306 NCDILWLS-WWIKDMA-PSNTACCARCNTP-PNLKGRYIG-ELDQNYFTCYA-PVI 356
Score = 37 (18.1 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 427 PVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHS--VINISNPDLINDTR 478
P IE + P H+T + + N + ++H +I +++ D + +T+
Sbjct: 588 PAIEHEHLNHYNSYKSPFNHTTTVNTINSI--HSSVHEPLLIRMNSKDNVQETQ 639
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 320 (117.7 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 99/329 (30%), Positives = 155/329 (47%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R + +L++L L +
Sbjct: 129 LELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRLS 186
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L+ L IP+LT ++ L +L+L+ N +S I G+FQ +
Sbjct: 187 YISEGAFEGLSNLRYLNLAMCNLREIPNLT-PLIK-LDELDLSGNHLSAIRPGSFQGLMH 244
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M +S+++ I AF +SL I L N L+ P PL L I LH NPW
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 304
Query: 209 CDCNMRSIKMWLADK--KNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVE 265
C+C++ + W+ D N C P L G+ +L + F C P I +
Sbjct: 305 CNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLN 364
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A + CR S ++SW ++ + A+ RI V+ G +L TN
Sbjct: 365 VTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKV--RIAVLSDG------TLNFTN 415
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVT 354
D+G + C+ N G A+ TL VT
Sbjct: 416 VTVQDTGMYTCMVSNSVGNTTASATLNVT 444
Score = 257 (95.5 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+ L +
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTN-TRLLNLHENQIQIIKVNSFKH--LRH 101
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GL NL ++L DN LT+IP+ F + L++L L NPI
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 161
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 162 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLI 219
Query: 196 KLMMIELHDN 205
KL ++L N
Sbjct: 220 KLDELDLSGN 229
Score = 149 (57.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 107/422 (25%), Positives = 172/422 (40%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++L +S N+++ + AF GL NL L L + I +GA L+ L E+ L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAFN--GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 112 TSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
SIPS F + LR L+L +S I +GAF+ + L L+++ L I P T
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN-LTPL 218
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLL---KLMMIELHDNPWVCDC--NMRS-IKMWLADKK 224
L+ + L+GN LS S + L+ KL MI+ + N++S +++ LA
Sbjct: 219 IKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN- 277
Query: 225 NVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPP 283
N+ + P P ++ LH + + C +I S ++ ++ N T C + PP
Sbjct: 278 NLTLLPHDLFTPLHHLERIH--LHHNPWNCNCDILWLSWWIRDMAPSN-TACCARCNTPP 334
Query: 284 AAISWYWNGRLLLNNTAFSSYQRIFV-------IEQG---EYERKSSLVLTNAQE-SDSG 332
Y G L + F+ Y + V + +G E + ++S LT+ + +G
Sbjct: 335 NLKGRYI-GEL--DQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNG 391
Query: 333 RFYCVAENRAGIA---DA--NFTLQVTYRGVGLPFLGGGHINGXXXXXXXXXXXXXXXXX 387
+ IA D NFT VT + G+ N
Sbjct: 392 TVMTHGAYKVRIAVLSDGTLNFT-NVTVQDTGMYTCMVS--NSVGNTTASATLNVTAATT 448
Query: 388 XXXXRMRTITYPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHS 447
T+T + P+Q E N N P TPVI+ + P S S
Sbjct: 449 TPFSYFSTVTV-ETMEPSQDEARTTDN-----NVGP--TPVIDWETTNVTTSLTPQSTRS 500
Query: 448 TE 449
TE
Sbjct: 501 TE 502
Score = 49 (22.3 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 466 INISNPDLINDTRKPEGL-SPEPHNDDVLFQNNYWNQN---------IRQ--PTNSELGF 513
IN+++ +L T P L +P H + + +N WN N IR P+N+
Sbjct: 272 INLAHNNL---TLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIRDMAPSNTACCA 328
Query: 514 DSNDKTPIIDGVSIGGELDDNYPPDYGLPIV 544
N P + G IG ELD NY Y P++
Sbjct: 329 RCNTP-PNLKGRYIG-ELDQNYFTCYA-PVI 356
Score = 37 (18.1 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 427 PVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHS--VINISNPDLINDTR 478
P IE + P H+T + + N + ++H +I +++ D + +T+
Sbjct: 588 PAIEHEHLNHYNSYKSPFNHTTTVNTINSI--HSSVHEPLLIRMNSKDNVQETQ 639
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 320 (117.7 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 99/329 (30%), Positives = 155/329 (47%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R + +L++L L +
Sbjct: 129 LELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRLS 186
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L+ L IP+LT ++ L +L+L+ N +S I G+FQ +
Sbjct: 187 YISEGAFEGLSNLRYLNLAMCNLREIPNLT-PLIK-LDELDLSGNHLSAIRPGSFQGLMH 244
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M +S+++ I AF +SL I L N L+ P PL L I LH NPW
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 304
Query: 209 CDCNMRSIKMWLADK--KNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVE 265
C+C++ + W+ D N C P L G+ +L + F C P I +
Sbjct: 305 CNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLN 364
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A + CR S ++SW ++ + A+ RI V+ G +L TN
Sbjct: 365 VTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKV--RIAVLSDG------TLNFTN 415
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVT 354
D+G + C+ N G A+ TL VT
Sbjct: 416 VTVQDTGMYTCMVSNSVGNTTASATLNVT 444
Score = 257 (95.5 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+ L +
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTN-TRLLNLHENQIQIIKVNSFKH--LRH 101
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GL NL ++L DN LT+IP+ F + L++L L NPI
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 161
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 162 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLI 219
Query: 196 KLMMIELHDN 205
KL ++L N
Sbjct: 220 KLDELDLSGN 229
Score = 149 (57.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 107/422 (25%), Positives = 172/422 (40%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++L +S N+++ + AF GL NL L L + I +GA L+ L E+ L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAFN--GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 112 TSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
SIPS F + LR L+L +S I +GAF+ + L L+++ L I P T
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN-LTPL 218
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLL---KLMMIELHDNPWVCDC--NMRS-IKMWLADKK 224
L+ + L+GN LS S + L+ KL MI+ + N++S +++ LA
Sbjct: 219 IKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN- 277
Query: 225 NVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPP 283
N+ + P P ++ LH + + C +I S ++ ++ N T C + PP
Sbjct: 278 NLTLLPHDLFTPLHHLERIH--LHHNPWNCNCDILWLSWWIRDMAPSN-TACCARCNTPP 334
Query: 284 AAISWYWNGRLLLNNTAFSSYQRIFV-------IEQG---EYERKSSLVLTNAQE-SDSG 332
Y G L + F+ Y + V + +G E + ++S LT+ + +G
Sbjct: 335 NLKGRYI-GEL--DQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNG 391
Query: 333 RFYCVAENRAGIA---DA--NFTLQVTYRGVGLPFLGGGHINGXXXXXXXXXXXXXXXXX 387
+ IA D NFT VT + G+ N
Sbjct: 392 TVMTHGAYKVRIAVLSDGTLNFT-NVTVQDTGMYTCMVS--NSVGNTTASATLNVTAATT 448
Query: 388 XXXXRMRTITYPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHS 447
T+T + P+Q E N N P TPVI+ + P S S
Sbjct: 449 TPFSYFSTVTV-ETMEPSQDEARTTDN-----NVGP--TPVIDWETTNVTTSLTPQSTRS 500
Query: 448 TE 449
TE
Sbjct: 501 TE 502
Score = 49 (22.3 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 466 INISNPDLINDTRKPEGL-SPEPHNDDVLFQNNYWNQN---------IRQ--PTNSELGF 513
IN+++ +L T P L +P H + + +N WN N IR P+N+
Sbjct: 272 INLAHNNL---TLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIRDMAPSNTACCA 328
Query: 514 DSNDKTPIIDGVSIGGELDDNYPPDYGLPIV 544
N P + G IG ELD NY Y P++
Sbjct: 329 RCNTP-PNLKGRYIG-ELDQNYFTCYA-PVI 356
Score = 37 (18.1 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 427 PVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHS--VINISNPDLINDTR 478
P IE + P H+T + + N + ++H +I +++ D + +T+
Sbjct: 588 PAIEHEHLNHYNSYKSPFNHTTTVNTINSI--HSSVHEPLLIRMNSKDNVQETQ 639
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 320 (117.7 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 99/329 (30%), Positives = 155/329 (47%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R + +L++L L +
Sbjct: 129 LELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRLS 186
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L+ L IP+LT ++ L +L+L+ N +S I G+FQ +
Sbjct: 187 YISEGAFEGLSNLRYLNLAMCNLREIPNLT-PLIK-LDELDLSGNHLSAIRPGSFQGLMH 244
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M +S+++ I AF +SL I L N L+ P PL L I LH NPW
Sbjct: 245 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 304
Query: 209 CDCNMRSIKMWLADK--KNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVE 265
C+C++ + W+ D N C P L G+ +L + F C P I +
Sbjct: 305 CNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLN 364
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A + CR S ++SW ++ + A+ RI V+ G +L TN
Sbjct: 365 VTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKV--RIAVLSDG------TLNFTN 415
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVT 354
D+G + C+ N G A+ TL VT
Sbjct: 416 VTVQDTGMYTCMVSNSVGNTTASATLNVT 444
Score = 257 (95.5 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+ L +
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTN-TRLLNLHENQIQIIKVNSFKH--LRH 101
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GL NL ++L DN LT+IP+ F + L++L L NPI
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 161
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 162 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLI 219
Query: 196 KLMMIELHDN 205
KL ++L N
Sbjct: 220 KLDELDLSGN 229
Score = 149 (57.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 106/422 (25%), Positives = 173/422 (40%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++L +S N+++ + AF GL NL L L + I +GA L+ L E+ L +N +
Sbjct: 103 EILQLSRNHIRTIEIGAFN--GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 160
Query: 112 TSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
SIPS F + LR L+L +S I +GAF+ + L L+++ L I P T
Sbjct: 161 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN-LTPL 218
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLL---KLMMIELHDNPWVCDC--NMRS-IKMWLADKK 224
L+ + L+GN LS S + L+ KL MI+ + N++S +++ LA
Sbjct: 219 IKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN- 277
Query: 225 NVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPP 283
N+ + P P ++ LH + + C +I S +++ ++ N T C + PP
Sbjct: 278 NLTLLPHDLFTPLHHLERIH--LHHNPWNCNCDILWLSWWIKDMAPSN-TACCARCNTPP 334
Query: 284 AAISWYWNGRLLLNNTAFSSYQRIFV-------IEQG---EYERKSSLVLTNAQE-SDSG 332
Y G L + F+ Y + V + +G E + ++S LT+ + +G
Sbjct: 335 NLKGRYI-GEL--DQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNG 391
Query: 333 RFYCVAENRAGIA---DA--NFTLQVTYRGVGLPFLGGGHINGXXXXXXXXXXXXXXXXX 387
+ IA D NFT VT + G+ N
Sbjct: 392 TVMTHGAYKVRIAVLSDGTLNFT-NVTVQDTGMYTCMVS--NSVGNTTASATLNVTAATT 448
Query: 388 XXXXRMRTITYPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHS 447
T+T + P+Q E N N P TPV++ + P S S
Sbjct: 449 TPFSYFSTVTV-ETMEPSQDEARTTDN-----NVGP--TPVVDWETTNVTTSLTPQSTRS 500
Query: 448 TE 449
TE
Sbjct: 501 TE 502
Score = 48 (22.0 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 489 NDDVLFQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGELDDNYPPDYGLPIV 544
N D+L+ + +W +++ P+N+ N P + G IG ELD NY Y P++
Sbjct: 306 NCDILWLS-WWIKDMA-PSNTACCARCNTP-PNLKGRYIG-ELDQNYFTCYA-PVI 356
Score = 37 (18.1 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 427 PVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHS--VINISNPDLINDTR 478
P IE + P H+T + + N + ++H +I +++ D + +T+
Sbjct: 588 PAIEHEHLNHYNSYKSPFNHTTTVNTINSI--HSSVHEPLLIRMNSKDNVQETQ 639
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 310 (114.2 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 101/331 (30%), Positives = 159/331 (48%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R + +L++L L +
Sbjct: 97 LELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRLS 154
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L+ L IP+LT V+ L +L+L+ N ++ I G+FQ +
Sbjct: 155 YISEGAFEGLSNLRYLNLAMCNLREIPNLT-PLVK-LDELDLSGNHLTAIRPGSFQGLMH 212
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M +S+++ I AF +SL I L N L+ P PL +L I LH NPW
Sbjct: 213 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL-RLERIHLHHNPWN 271
Query: 209 CDCNMRSIKMWLADK--KNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIRMDSRYVE 265
C+C++ + W+ DK N C P L G+ +L + F C P I +
Sbjct: 272 CNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPADLN 331
Query: 266 AVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSLVL 323
A + CR S ++SW NG ++ + +Y+ RI V+ G +L
Sbjct: 332 VTEGMAAEMKCRA-STSLTSVSWITPNGSVMTHG----AYRVRIAVLSDG------TLNF 380
Query: 324 TNAQESDSGRFYCVAENRAGIADANFTLQVT 354
T D+G + C+ N G A+ TL VT
Sbjct: 381 TKVTVQDTGLYTCMVSNSVGNTTASATLNVT 411
Score = 256 (95.2 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C K L +P+ + T++L++ N +QI+ +F+ L +
Sbjct: 15 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTN-TRLLNLHENQIQIIKVNSFKH--LRH 69
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GL NL ++L DN LT+IP+ F + L++L L NPI
Sbjct: 70 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 129
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 130 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLV 187
Query: 196 KLMMIELHDN 205
KL ++L N
Sbjct: 188 KLDELDLSGN 197
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/154 (31%), Positives = 83/154 (53%)
Query: 31 WMECRDKFLITIPEAPESELTQV--LDMSG-NNLQILPKEAFRRAGLLNLQKLFLARCHI 87
W+ R+ + +IP + + + LD+ L + + AF GL NL+ L LA C++
Sbjct: 122 WL--RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFE--GLSNLRYLNLAMCNL 177
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP 147
+I + L L L E+DLS N LT+I +FQ + L+ L + ++ I IE+ AF +
Sbjct: 178 REIPN--LTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 235
Query: 148 GLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
LV+++++ + L + + FT + LE I L+ N
Sbjct: 236 SLVEINLAHNNLTLLPHDLFTPLR-LERIHLHHN 268
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 308 (113.5 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 104/349 (29%), Positives = 160/349 (45%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L T+P L+++ ++ N ++ +P AF R +L++L L +
Sbjct: 139 LELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLE 196
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I A +GL NL ++L L IP+LT VR L +L L+ N + I G+FQ +
Sbjct: 197 YISEAAFEGLVNLRYLNLGMCNLKDIPNLT-ALVR-LEELELSGNRLDLIRPGSFQGLTS 254
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + +++ I AF KSLE + L+ N L P PL +L + L+ NPW
Sbjct: 255 LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 314
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP C P L G+ +L F C P I
Sbjct: 315 CNCDVLWLSWWL--KETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTD 372
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSL 321
+ A + CR + +++W NG L+ + SY+ RI V+ G +L
Sbjct: 373 LNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLMTHG----SYRVRISVLHDG------TL 421
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFLGGGHING 370
TN D+G++ C+ N AG A+ TL V+ V GGG G
Sbjct: 422 NFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS--AVDPVAAGGGGPGG 468
Score = 237 (88.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 63/191 (32%), Positives = 106/191 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C + + + C + L +P + P + T+ L++ N +Q++ + F+ L
Sbjct: 57 CPAACSCSNQASR--VICTRRELAEVPASIPVN--TRYLNLQENGIQVIRTDTFKH--LR 110
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L NPI
Sbjct: 111 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L +LD+ E RLE+IS AF G +L + L L P ++ L
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTAL 228
Query: 195 LKLMMIELHDN 205
++L +EL N
Sbjct: 229 VRLEELELSGN 239
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 307 (113.1 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 104/349 (29%), Positives = 160/349 (45%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L T+P L+++ ++ N ++ +P AF R +L++L L +
Sbjct: 139 LELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLE 196
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I A +GL NL ++L L IP+LT VR L +L L+ N + I G+FQ +
Sbjct: 197 YISEAAFEGLVNLRYLNLGMCNLKDIPNLT-ALVR-LEELELSGNRLDLIRPGSFQGLTS 254
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + +++ I AF KSLE + L+ N L P PL +L + L+ NPW
Sbjct: 255 LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 314
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP C P L G+ +L F C P I
Sbjct: 315 CNCDVLWLSWWL--KETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTD 372
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSL 321
+ A + CR + +++W NG L+ + SY+ RI V+ G +L
Sbjct: 373 LNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLMTHG----SYRVRISVLHDG------TL 421
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFLGGGHING 370
TN D+G++ C+ N AG A+ TL V+ V P GG G
Sbjct: 422 NFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS--AVD-PVAAGGASGG 467
Score = 237 (88.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 63/191 (32%), Positives = 106/191 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C + + + C + L +P + P + T+ L++ N +Q++ + F+ L
Sbjct: 57 CPAACSCSNQASR--VICTRRELAEVPASIPVN--TRYLNLQENGIQVIRTDTFKH--LR 110
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L NPI
Sbjct: 111 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L +LD+ E RLE+IS AF G +L + L L P ++ L
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTAL 228
Query: 195 LKLMMIELHDN 205
++L +EL N
Sbjct: 229 VRLEELELSGN 239
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 306 (112.8 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 104/349 (29%), Positives = 161/349 (46%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L T+P L+++ ++ N ++ +P AF R +L++L L +
Sbjct: 139 LELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLE 196
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I A +GL NL ++L L IP+LT VR L +L L+ N + I G+FQ +
Sbjct: 197 YISEAAFEGLVNLRYLNLGMCNLKDIPNLT-ALVR-LEELELSGNRLDLIRPGSFQGLTS 254
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + +++ I AF KSLE + L+ N L P PL +L + L+ NPW
Sbjct: 255 LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 314
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP C P L G+ +L F C P I
Sbjct: 315 CNCDVLWLSWWL--KETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTD 372
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSL 321
+ A + CR + +++W NG L+ + SY+ RI V+ G +L
Sbjct: 373 LNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLMTHG----SYRVRISVLHDG------TL 421
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFLGGGHING 370
TN D+G++ C+ N AG A+ TL V+ V P GG +G
Sbjct: 422 NFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS--AVD-PVAAGGTGSG 467
Score = 234 (87.4 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 63/191 (32%), Positives = 105/191 (54%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C + + + C + L +P + P + T+ L++ N +Q++ + F+ L
Sbjct: 57 CPVACSCSNQASR--VICTRRDLAEVPASIPVN--TRYLNLQENGIQVIRTDTFKH--LR 110
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L NPI
Sbjct: 111 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L +LD+ E RLE+IS AF G +L + L L P ++ L
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTAL 228
Query: 195 LKLMMIELHDN 205
++L +EL N
Sbjct: 229 VRLEELELSGN 239
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 305 (112.4 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 99/333 (29%), Positives = 155/333 (46%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L T+P L+++ ++ N ++ +P AF R +L++L L +
Sbjct: 141 LELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLE 198
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I A +GL NL ++L L IP+LT VR L +L L+ N + I G+FQ +
Sbjct: 199 YISEAAFEGLVNLRYLNLGMCNLKDIPNLT-ALVR-LEELELSGNRLDLIRPGSFQGLTS 256
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + +++ I AF KSLE + L+ N L P PL +L + L+ NPW
Sbjct: 257 LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 316
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP C P L G+ +L F C P I
Sbjct: 317 CNCDVLWLSWWL--KETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTD 374
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSL 321
+ A + CR + +++W NG L+ + SY+ RI V+ G +L
Sbjct: 375 LNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLMTHG----SYRVRISVLHDG------TL 423
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
TN D+G++ C+ N AG A+ TL V+
Sbjct: 424 NFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS 456
Score = 238 (88.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 63/191 (32%), Positives = 107/191 (56%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C + + + C + L +P + P + T+ L++ N++Q++ + F+ L
Sbjct: 59 CPAACSCSNQASR--VICTRRELAEVPASIPVN--TRYLNLQENSIQVIRTDTFKH--LR 112
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L NPI
Sbjct: 113 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 172
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L +LD+ E RLE+IS AF G +L + L L P ++ L
Sbjct: 173 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTAL 230
Query: 195 LKLMMIELHDN 205
++L +EL N
Sbjct: 231 VRLEELELSGN 241
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 305 (112.4 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 99/333 (29%), Positives = 155/333 (46%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L T+P L+++ ++ N ++ +P AF R +L++L L +
Sbjct: 141 LELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLE 198
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I A +GL NL ++L L IP+LT VR L +L L+ N + I G+FQ +
Sbjct: 199 YISEAAFEGLVNLRYLNLGMCNLKDIPNLT-ALVR-LEELELSGNRLDLIRPGSFQGLTS 256
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + +++ I AF KSLE + L+ N L P PL +L + L+ NPW
Sbjct: 257 LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 316
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP C P L G+ +L F C P I
Sbjct: 317 CNCDVLWLSWWL--KETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTD 374
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSL 321
+ A + CR + +++W NG L+ + SY+ RI V+ G +L
Sbjct: 375 LNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLMTHG----SYRVRISVLHDG------TL 423
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
TN D+G++ C+ N AG A+ TL V+
Sbjct: 424 NFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS 456
Score = 238 (88.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 63/191 (32%), Positives = 107/191 (56%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C + + + C + L +P + P + T+ L++ N++Q++ + F+ L
Sbjct: 59 CPAACSCSNQASR--VICTRRELAEVPASIPVN--TRYLNLQENSIQVIRTDTFKH--LR 112
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L NPI
Sbjct: 113 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 172
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L +LD+ E RLE+IS AF G +L + L L P ++ L
Sbjct: 173 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTAL 230
Query: 195 LKLMMIELHDN 205
++L +EL N
Sbjct: 231 VRLEELELSGN 241
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 305 (112.4 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 99/333 (29%), Positives = 155/333 (46%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L T+P L+++ ++ N ++ +P AF R +L++L L +
Sbjct: 139 LELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLE 196
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I A +GL NL ++L L IP+LT VR L +L L+ N + I G+FQ +
Sbjct: 197 YISEAAFEGLVNLRYLNLGMCNLKDIPNLT-ALVR-LEELELSGNRLDLIRPGSFQGLTS 254
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + +++ I AF KSLE + L+ N L P PL +L + L+ NPW
Sbjct: 255 LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 314
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP C P L G+ +L F C P I
Sbjct: 315 CNCDVLWLSWWL--KETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTD 372
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSL 321
+ A + CR + +++W NG L+ + SY+ RI V+ G +L
Sbjct: 373 LNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLMTHG----SYRVRISVLHDG------TL 421
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
TN D+G++ C+ N AG A+ TL V+
Sbjct: 422 NFTNVTVQDTGQYTCMVTNSAGNTTASATLNVS 454
Score = 237 (88.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 63/191 (32%), Positives = 106/191 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C + + + C + L +P + P + T+ L++ N +Q++ + F+ L
Sbjct: 57 CPAACSCSNQASR--VICTRRELAEVPASIPVN--TRYLNLQENGIQVIRTDTFKH--LR 110
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L++ + +I+ GA +GL +L ++L DN LT++P+ F+ + LR+L L NPI
Sbjct: 111 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 136 SKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF VP L +LD+ E RLE+IS AF G +L + L L P ++ L
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTAL 228
Query: 195 LKLMMIELHDN 205
++L +EL N
Sbjct: 229 VRLEELELSGN 239
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 310 (114.2 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/271 (30%), Positives = 130/271 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L IP+ P S T+ L+++GNN+ + K F GL
Sbjct: 34 CPALCTCT--GAT--VDCHGAGLQAIPKNIPRS--TERLELNGNNITRIHKNDF--VGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L IG ++ GA D + L + L+ N L ++P L FQ+ + L L+L+ N I
Sbjct: 86 QLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTI 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ L L + ++++ I AF + LE + LN N ++ PV S +
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK- 254
KL LH N CDC++ + WL + + + C+GP L G +++ +F+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSG 265
Query: 255 -------PEIRMDSRYVEAVSS-ENATVVCR 277
P + S A+ S N V CR
Sbjct: 266 QGEAGRVPSCTLSSGSCPAMCSCSNGIVDCR 296
Score = 202 (76.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 52/201 (25%), Positives = 91/201 (45%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I GA L IDLS+N + I FQ +R L L L N I+ + +G F +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L ++ +++ + P+AF ++L + L N++ + L + + L NP
Sbjct: 381 YTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNP 440
Query: 207 WVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVFSDLHADDFACKPEIRMDSR 262
++CDCN++ WLAD + P++ + C P RL+ K + + F C + +
Sbjct: 441 FICDCNLK----WLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAK---EQY 493
Query: 263 YVEAVSSENATVVCRVDSIPP 283
++ C D++ P
Sbjct: 494 FIPGTEDYQLNSECNSDAVCP 514
Score = 195 (73.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G LT+L +I+LS+N ++ I F+ + +L+L N + I G F+ + GL
Sbjct: 558 TGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRT 617
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ I ++FTG +++ + L N+++ + + L L + L NP+ C+C
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNC 677
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + WL +K V P C P+ L D+ DF C+
Sbjct: 678 QLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 189 (71.6 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC++R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCVGPPDMEGKLLLTTPAKKFECQGPPTLAVQAKCDPCLSS 932
Score = 170 (64.9 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 52/167 (31%), Positives = 85/167 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ EC L IPE P+S T L ++ N + IL F++ L
Sbjct: 513 CPHKCRCE----ASLAECSSLKLTKIPERIPQS--TAELRLNNNEISILEATGIFKK--L 564
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+L+K+ L+ + +I+ GA +G ++ E+ L+ N L SI S F+ + LR L L N
Sbjct: 565 THLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNR 624
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS I +F + + L + ++++ ISP AF ++L ++ L N
Sbjct: 625 ISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 671
Score = 134 (52.2 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C +K L +P+ +T+ L + GN ++P + +
Sbjct: 734 CPQECACL----DTVVRCSNKHLHVLPKGIPKNVTE-LYLDGNQFTLVPGQL---STFKY 785
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ + L+ I + + + ++ L + LS N L IP L FQ +R LR L+L N IS
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +G F V L L + + L
Sbjct: 846 TLREGIFTDVTSLSHLAIGANPL 868
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 21 CICKWKGGKQWMECRDKF-LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQK 79
C C QW+ R L T P S + G N+ + K F +G +
Sbjct: 219 CDCHLAWLSQWLRQRPTIGLFTQCSGPAS-------LRGLNVAEVQKSEFSCSGQGEAGR 271
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
+ C + A+ +N I +D LT+IP+ ++ + ++ L N I I
Sbjct: 272 V--PSCTLSSGSCPAMCSCSNGI-VDCRGKGLTAIPANLPET---MTEIRLELNGIKSIP 325
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
GAF L ++D+S +++ I+P+AF G +SL S+ L GN+++ P L L +
Sbjct: 326 PGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQL 385
Query: 200 IELHDNPWVC 209
+ L+ N C
Sbjct: 386 LLLNANKINC 395
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 305 (112.4 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 103/341 (30%), Positives = 155/341 (45%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D L +P L+++ ++ N ++ LP AF R +L++L L +
Sbjct: 122 LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVP--SLRRLDLGELKKLD 179
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I A GL NL ++L L IP+LT VR L +L L+ N + I G+FQ +
Sbjct: 180 YISDAAFVGLINLRYLNLGMCGLKDIPNLT-PLVR-LEELELSGNRLEIIRPGSFQGLES 237
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + S++ I AF K+LE + L+ N L P PL KL + L+ NPWV
Sbjct: 238 LRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWV 297
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP C P L GK +L F C P I
Sbjct: 298 CNCDVLWLSWWL--KETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTD 355
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSL 321
+ A + CR + +++W NG L+ + SY+ RI V+ G +L
Sbjct: 356 LNVTEGMAAELKCRTGT-SMTSVNWITPNGTLMTHG----SYRVRISVLHDG------TL 404
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPF 362
TN D+G++ C+ N AG A L VT V + +
Sbjct: 405 NFTNVTLRDTGQYTCMVTNSAGNTTATAVLNVTAADVSVNY 445
Score = 249 (92.7 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 64/190 (33%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + + + C + L +P+ + T+ L++ N +Q++ + F+ L +
Sbjct: 40 CPAVCSCSNQASR--VICARQHLEEVPDNISNN-TRYLNLQENTIQVIKSDTFKH--LRH 94
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L++ I QI+ GA +GL NL ++L DN LT +PS F+ + LR+L L NPI
Sbjct: 95 LEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIE 154
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ AF VP L +LD+ E +L++IS AF G +L + L L P ++ PL+
Sbjct: 155 TLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNLGMCGLKDIP--NLTPLV 212
Query: 196 KLMMIELHDN 205
+L +EL N
Sbjct: 213 RLEELELSGN 222
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 309 (113.8 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 77/265 (29%), Positives = 128/265 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L IP+ P + T+ L+++GNN+ + K F AGL
Sbjct: 34 CPALCTCT---GTT-VDCHGTGLQAIPKNIPRN--TERLELNGNNITRIHKNDF--AGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L IG ++ GA D + L + L+ N L +P L FQ+ + L L+L+ N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFL 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + AF+ L L + ++R+ I AF + LE + LN N ++ PV S +
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKP 255
KL LH N CDC++ + WL + + + C+GP L G +++ +F+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKGEFSCSG 265
Query: 256 EIRMDSRYVEAVSSENATVVCRVDS 280
+ +SS + +C S
Sbjct: 266 QGEAAGAPACTLSSGSCPAMCSCSS 290
Score = 197 (74.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 45/163 (27%), Positives = 83/163 (50%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L++L +I+LS+N ++ I TF+ + +L+L N + I G F+ + GL
Sbjct: 558 TGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRT 617
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ I ++FTG +++ + L N ++ + + L L + L NP+ C+C
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNC 677
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
++ + WL +K V P C P+ L D+ DF C+
Sbjct: 678 HLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 196 (74.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I GA L IDLS+N + I FQ +R L L L N I+ + +G F +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L ++ +++ I P+AF ++L + L N++ + L + + L NP
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNP 440
Query: 207 WVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVFSDLHADDFAC 253
++CDCN++ WLAD + P++ C P RL+ K + + F C
Sbjct: 441 FICDCNLK----WLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Score = 191 (72.3 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 47/172 (27%), Positives = 81/172 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC +R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQGPPSLAVQAKCDPCLSS 932
Score = 164 (62.8 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 51/167 (30%), Positives = 84/167 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ +EC L IPE P+S T L ++ N + IL F++ L
Sbjct: 513 CPHKCRCE----ASVVECSSLKLSKIPERIPQS--TTELRLNNNEISILEATGLFKK--L 564
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+L+K+ L+ + +I+ G +G ++ E+ L+ N L SI S F+ + LR L L N
Sbjct: 565 SHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNR 624
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS I +F + + L + ++ + ISP AF ++L ++ L N
Sbjct: 625 ISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 135 (52.6 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 40/143 (27%), Positives = 67/143 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C +K L +P+ +T+ L + GN ++P + +
Sbjct: 734 CPQECACL----DTVVRCSNKHLQALPKGIPKNVTE-LYLDGNQFTLVPGQL---STFKY 785
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ + L+ I + + + ++ L + LS N L IP L FQ +R LR L+L N +S
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVS 845
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+++G F V L L + + L
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPL 868
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 302 (111.4 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 96/333 (28%), Positives = 158/333 (47%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARCHIGQI-DSGAL 95
L +P S L ++ + +L I +P AF+R L +L+ L + + + + +L
Sbjct: 189 LTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKR--LFHLKNLEIDYWPLLDLMPANSL 246
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + +++ L+++P L F+ + +L LNL+ NPIS IE G F + L +L +
Sbjct: 247 YGL-NLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIV 305
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
++L I P +F G + L + ++ N L L ++ +++NP CDC +
Sbjct: 306 GAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRL-- 363
Query: 216 IKMWLADKK-NVPV---QPACTGPERLSGKVFSDLHADD----FACK-PEIRMDSRYVEA 266
+WL ++ N+ QP C GP+ + + F D H+ F CK P+IR + +
Sbjct: 364 --LWLLQRQPNLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIR-EKKLQHL 420
Query: 267 VSSENATVV--CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ E TV C D P ISW R + S R V+ G E +
Sbjct: 421 LVDEGQTVQLECNADGDPQPVISWVTPRRRFITT---KSNGRATVLGDGTLE------IR 471
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQVTYRG 357
AQ+ DSG + C+A N AG + FT +T +G
Sbjct: 472 FAQDQDSGMYVCIASNAAG--NDTFTASLTVKG 502
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 57/190 (30%), Positives = 94/190 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + + C + L+ IPE E T++LD+S N L+ + E F LL
Sbjct: 28 CPARCECSAQNKS--VSCHRRRLLAIPEGIPIE-TKILDLSKNRLKSINPEEFISYPLL- 83
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+++ L+ I ++ GA + L NL + L N L +P F + L L+++ N I
Sbjct: 84 -EEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIV 142
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 143 ILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRS 202
Query: 197 LMMIEL-HDN 205
L+ + L H N
Sbjct: 203 LIALHLKHLN 212
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/153 (26%), Positives = 75/153 (49%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
L + +D+S N + + AF L NL+ L L + + G GL+NL ++D+S+N
Sbjct: 82 LLEEIDLSDNIIANVEPGAFNN--LFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISEN 139
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
+ + FQ + L+ L + N + I AF + L +L + + L + EA +
Sbjct: 140 KIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSH 199
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
+SL ++ L +++ PV + + L L +E+
Sbjct: 200 LRSLIALHLKHLNINNMPVYAFKRLFHLKNLEI 232
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 308 (113.5 bits), Expect = 7.8e-24, P = 7.8e-24
Identities = 74/238 (31%), Positives = 120/238 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L IP+ P + T+ L+++GNN+ + K F AGL
Sbjct: 34 CPALCTCT---GTT-VDCHGTGLQAIPKNIPRN--TERLELNGNNITRIHKNDF--AGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L IG ++ GA D + L + L+ N L +P L FQ+ + L L+L+ N I
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ L L + ++++ I AF + LE + LN N ++ PV S +
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + + + C+GP L G +++ +F+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 204 (76.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I GA L IDLS+N + I FQ +R L L L N I+ + +G F +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L ++ +++ I P+AF ++L + L N++ + L + + L NP
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNP 440
Query: 207 WVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVFSDLHADDFAC--KPEIRMD 260
++CDCN++ WLAD + P++ + C P RL+ K + + F C K + +
Sbjct: 441 FICDCNLK----WLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIP 496
Query: 261 SRYVEAVSSE-NATVVC 276
++SE N+ VVC
Sbjct: 497 GTEDYQLNSECNSDVVC 513
Score = 196 (74.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G LT+L +I+LS+N ++ I F+ + +L+L N + I G F+ + GL
Sbjct: 558 TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRT 617
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ I ++FTG +++ + L N+++ + + L L + L NP+ C+C
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNC 677
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + WL +K V P C P+ L D+ DF C+
Sbjct: 678 QLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 191 (72.3 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 47/172 (27%), Positives = 83/172 (48%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC++R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP+ + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQGPPTLAVQAKCDLCLSS 932
Score = 173 (66.0 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ +EC L IPE P+S T L ++ N + IL F++ L
Sbjct: 513 CPHKCRCE----ANVVECSSLKLTKIPERIPQS--TAELRLNNNEISILEATGMFKK--L 564
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+L+K+ L+ + +I+ GA +G ++ E+ L+ N L SI S F+ + LR L L N
Sbjct: 565 THLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNR 624
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS I +F + + L + ++++ +SP AF +SL ++ L N
Sbjct: 625 ISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 136 (52.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C +K L +P+ +T+ L + GN ++P + +
Sbjct: 734 CPQECACL----DTVVRCSNKHLRALPKGIPKNVTE-LYLDGNQFTLVPGQL---STFKY 785
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ + L+ I + + + ++ L + LS N L IP L FQ +R LR L+L N IS
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+++G F V L L + + L
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPL 868
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 21 CICKWKGGKQWMECRDKF-LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQK 79
C C QW+ R L T P S + G N+ + K F +G +
Sbjct: 219 CDCHLAWLSQWLRQRPTIGLFTQCSGPAS-------LRGLNVAEVQKSEFSCSGQGEAGR 271
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
+ C + A+ +N I +D LT+IP+ ++ + ++ L N I I
Sbjct: 272 V--PTCTLSSGSCPAMCTCSNGI-VDCRGKGLTAIPANLPET---MTEIRLELNGIKSIP 325
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
GAF L ++D+S +++ I+P+AF G +SL S+ L GN+++ P L L +
Sbjct: 326 PGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQL 385
Query: 200 IELHDNPWVC 209
+ L+ N C
Sbjct: 386 LLLNANKINC 395
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 302 (111.4 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 96/331 (29%), Positives = 156/331 (47%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P AF R +L++L L +
Sbjct: 130 LELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLS 187
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL+NL ++L L IP+L VR L +L ++ N +S I G+F+ +
Sbjct: 188 YISEGAFEGLSNLRYLNLGMCNLKEIPNL-IPLVR-LDELEMSGNQLSIIRPGSFKGLVH 245
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M ++++ I AF +SL + L N L+ P PL L + LH NPW
Sbjct: 246 LQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHHNPWN 305
Query: 209 CDCNMRSIKMWLADKKNVPVQPAC----TGPERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP +C + P G+ +L + F C P I
Sbjct: 306 CNCDILWLSWWL--KEMVPANTSCCARCSSPTSHKGRYIGELDQNYFHCYAPVIVEPPAD 363
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVL 323
+ A + CR +S+ ++SW ++ + A+ RI V+ G +L
Sbjct: 364 LNVTEGMAAELKCRANSL--TSVSWITPNGSIMTHGAYKI--RISVLNDG------TLNF 413
Query: 324 TNAQESDSGRFYCVAENRAGIADANFTLQVT 354
TN D+G + C+ N AG A+ TL V+
Sbjct: 414 TNVTMQDTGTYTCMVSNSAGNTTASATLNVS 444
Score = 254 (94.5 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 66/190 (34%), Positives = 106/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C + L +P+ + T+ L++ N +Q++ ++F+ L +
Sbjct: 48 CPSVCSCSNQFSK--VICTRRGLRDVPDGISTN-TRYLNLQENLIQVIKVDSFKH--LRH 102
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L++ HI I+ GA +GL NL ++L DN LT+IP+ F+ + L++L L NPI
Sbjct: 103 LEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIE 162
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF VP L +LD+ E RL +IS AF G +L + L L P ++ PL+
Sbjct: 163 SIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIP--NLIPLV 220
Query: 196 KLMMIELHDN 205
+L +E+ N
Sbjct: 221 RLDELEMSGN 230
Score = 39 (18.8 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 24/113 (21%), Positives = 44/113 (38%)
Query: 444 SYHSTEMISPNGQLPNKTLHSV-INISNPDLINDTRKPEGLSPEPHNDDVLFQNNYWNQN 502
S S I+PNG + + + I++ N +N T + + N+ N
Sbjct: 380 SLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVT---MQDTGTYTCMVSNSAGNTT 436
Query: 503 IRQPTNSELGFDSNDKTPIIDGVSIGGELDDNYPPDYGLPIVGQGQNELLPNN 555
++ L S + + ++ E + PPD G P V Q +N P++
Sbjct: 437 ----ASATLNVSSTENSSFSYFTTVTVETTEA-PPDEGHPTVQQ-KNGPTPSS 483
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 308 (113.5 bits), Expect = 8.4e-24, P = 8.4e-24
Identities = 74/238 (31%), Positives = 120/238 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L IP+ P + T+ L+++GNN+ + K F AGL
Sbjct: 34 CPALCTCT---GTT-VDCHGTGLQAIPKNIPRN--TERLELNGNNITRIHKNDF--AGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L IG ++ GA D + L + L+ N L +P L FQ+ + L L+L+ N I
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ L L + ++++ I AF + LE + LN N ++ PV S +
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + + + C+GP L G +++ +F+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 204 (76.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I GA L IDLS+N + I FQ +R L L L N I+ + +G F +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L ++ +++ I P+AF ++L + L N++ + L + + L NP
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNP 440
Query: 207 WVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVFSDLHADDFAC--KPEIRMD 260
++CDCN++ WLAD + P++ + C P RL+ K + + F C K + +
Sbjct: 441 FICDCNLK----WLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIP 496
Query: 261 SRYVEAVSSE-NATVVC 276
++SE N+ VVC
Sbjct: 497 GTEDYQLNSECNSDVVC 513
Score = 196 (74.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G LT+L +I+LS+N ++ I F+ + +L+L N + I G F+ + GL
Sbjct: 558 TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRT 617
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ I ++FTG +++ + L N+++ + + L L + L NP+ C+C
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNC 677
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + WL +K V P C P+ L D+ DF C+
Sbjct: 678 QLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 191 (72.3 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 47/172 (27%), Positives = 83/172 (48%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC++R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP+ + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQGPPTLAVQAKCDLCLSS 932
Score = 173 (66.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ +EC L IPE P+S T L ++ N + IL F++ L
Sbjct: 513 CPHKCRCE----ANVVECSSLKLTKIPERIPQS--TAELRLNNNEISILEATGMFKK--L 564
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+L+K+ L+ + +I+ GA +G ++ E+ L+ N L SI S F+ + LR L L N
Sbjct: 565 THLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNR 624
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS I +F + + L + ++++ +SP AF +SL ++ L N
Sbjct: 625 ISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 136 (52.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C +K L +P+ +T+ L + GN ++P + +
Sbjct: 734 CPQECACL----DTVVRCSNKHLRALPKGIPKNVTE-LYLDGNQFTLVPGQL---STFKY 785
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ + L+ I + + + ++ L + LS N L IP L FQ +R LR L+L N IS
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+++G F V L L + + L
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPL 868
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 21 CICKWKGGKQWMECRDKF-LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQK 79
C C QW+ R L T P S + G N+ + K F +G +
Sbjct: 219 CDCHLAWLSQWLRQRPTIGLFTQCSGPAS-------LRGLNVAEVQKSEFSCSGQGEAGR 271
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
+ C + A+ +N I +D LT+IP+ ++ + ++ L N I I
Sbjct: 272 V--PTCTLSSGSCPAMCTCSNGI-VDCRGKGLTAIPANLPET---MTEIRLELNGIKSIP 325
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
GAF L ++D+S +++ I+P+AF G +SL S+ L GN+++ P L L +
Sbjct: 326 PGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQL 385
Query: 200 IELHDNPWVC 209
+ L+ N C
Sbjct: 386 LLLNANKINC 395
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 305 (112.4 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 72/238 (30%), Positives = 120/238 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L IP+ P + T+ L+++GNN+ + K F AGL
Sbjct: 34 CPALCTCT---GTT-VDCHGTGLQAIPKNIPRN--TERLELNGNNITRIHKNDF--AGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L IG ++ GA D + L + L+ N L +P L FQ+ + L L+L+ N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + AF+ L L + ++++ I AF + LE + LN N ++ PV S +
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + + + C+GP L G +++ +F+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 196 (74.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I GA L IDLS+N + I FQ +R L L L N I+ + +G F +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L ++ +++ I P+AF ++L + L N++ + L + + L NP
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNP 440
Query: 207 WVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVFSDLHADDFAC 253
++CDCN++ WLAD + P++ C P RL+ K + + F C
Sbjct: 441 FICDCNLK----WLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Score = 195 (73.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/163 (26%), Positives = 82/163 (50%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L++L +I+LS+N ++ I TF+ + +L+L N + + G F+ + GL
Sbjct: 558 TGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRT 617
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ I ++FTG +++ + L N ++ + + L L + L NP+ C+C
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNC 677
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + WL +K V P C P+ L D+ DF C+
Sbjct: 678 QLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 192 (72.6 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC++R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQGPPSLAVQAKCDPCLSS 932
Score = 167 (63.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/167 (30%), Positives = 85/167 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ +EC L IPE P+S T L ++ N + IL F++ L
Sbjct: 513 CPHKCRCE----ASVVECSGLKLSKIPERIPQS--TTELRLNNNEISILEATGLFKK--L 564
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+L+K+ L+ + +I+ G +G T++ E+ L+ N L S+ S F+ + LR L L N
Sbjct: 565 SHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNR 624
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS I +F + + L + ++ + ISP AF ++L ++ L N
Sbjct: 625 ISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 135 (52.6 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 40/143 (27%), Positives = 67/143 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C +K L +P+ +T+ L + GN ++P + +
Sbjct: 734 CPQECACL----DTVVRCSNKHLQALPKGIPKNVTE-LYLDGNQFTLVPGQL---STFKY 785
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ + L+ I + + + ++ L + LS N L IP L FQ +R LR L+L N +S
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVS 845
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+++G F V L L + + L
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPL 868
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 21 CICKWKGGKQWMECRDKF-LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQK 79
C C QW+ R L T P S + G N+ + K F +G +
Sbjct: 219 CDCHLAWLSQWLRQRPTIGLFTQCSGPAS-------LRGLNVAEVQKSEFSCSGQGEAAQ 271
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
+ C + A+ +N I +D LT+IP+ ++ + ++ L N I I
Sbjct: 272 V--PACTLSSGSCPAMCSCSNGI-VDCRGKGLTAIPANLPET---MTEIRLELNGIKSIP 325
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
GAF L ++D+S +++ I+P+AF G +SL S+ L GN+++ P L L +
Sbjct: 326 PGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQL 385
Query: 200 IELHDNPWVC 209
+ L+ N C
Sbjct: 386 LLLNANKINC 395
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 305 (112.4 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 72/238 (30%), Positives = 120/238 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L IP+ P + T+ L+++GNN+ + K F AGL
Sbjct: 34 CPALCTCT---GTT-VDCHGTGLQAIPKNIPRN--TERLELNGNNITRIHKNDF--AGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L IG ++ GA D + L + L+ N L +P L FQ+ + L L+L+ N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + AF+ L L + ++++ I AF + LE + LN N ++ PV S +
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + + + C+GP L G +++ +F+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 196 (74.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I GA L IDLS+N + I FQ +R L L L N I+ + +G F +
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 380
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L ++ +++ I P+AF ++L + L N++ + L + + L NP
Sbjct: 381 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNP 440
Query: 207 WVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVFSDLHADDFAC 253
++CDCN++ WLAD + P++ C P RL+ K + + F C
Sbjct: 441 FICDCNLK----WLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Score = 195 (73.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/163 (26%), Positives = 82/163 (50%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L++L +I+LS+N ++ I TF+ + +L+L N + + G F+ + GL
Sbjct: 558 TGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRT 617
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ I ++FTG +++ + L N ++ + + L L + L NP+ C+C
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNC 677
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + WL +K V P C P+ L D+ DF C+
Sbjct: 678 QLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 192 (72.6 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 762 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC++R + W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP + GK+ A F C+ P + + ++ +SS
Sbjct: 881 VKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQGPPSLAVQAKCDPCLSS 932
Score = 167 (63.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/167 (30%), Positives = 85/167 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ +EC L IPE P+S T L ++ N + IL F++ L
Sbjct: 513 CPHKCRCE----ASVVECSGLKLSKIPERIPQS--TTELRLNNNEISILEATGLFKK--L 564
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+L+K+ L+ + +I+ G +G T++ E+ L+ N L S+ S F+ + LR L L N
Sbjct: 565 SHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNR 624
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS I +F + + L + ++ + ISP AF ++L ++ L N
Sbjct: 625 ISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 135 (52.6 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 40/143 (27%), Positives = 67/143 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C +K L +P+ +T+ L + GN ++P + +
Sbjct: 734 CPQECACL----DTVVRCSNKHLQALPKGIPKNVTE-LYLDGNQFTLVPGQL---STFKY 785
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ + L+ I + + + ++ L + LS N L IP L FQ +R LR L+L N +S
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVS 845
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+++G F V L L + + L
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPL 868
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 21 CICKWKGGKQWMECRDKF-LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQK 79
C C QW+ R L T P S + G N+ + K F +G +
Sbjct: 219 CDCHLAWLSQWLRQRPTIGLFTQCSGPAS-------LRGLNVAEVQKSEFSCSGQGEAAQ 271
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
+ C + A+ +N I +D LT+IP+ ++ + ++ L N I I
Sbjct: 272 V--PACTLSSGSCPAMCSCSNGI-VDCRGKGLTAIPANLPET---MTEIRLELNGIKSIP 325
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
GAF L ++D+S +++ I+P+AF G +SL S+ L GN+++ P L L +
Sbjct: 326 PGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQL 385
Query: 200 IELHDNPWVC 209
+ L+ N C
Sbjct: 386 LLLNANKINC 395
>UNIPROTKB|A6NDA9 [details] [associations]
symbol:LRIT2 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR020901
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:AC022389 CTD:340745 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
EMBL:BX648524 IPI:IPI01015843 RefSeq:NP_001017924.1
UniGene:Hs.450425 ProteinModelPortal:A6NDA9 SMR:A6NDA9 PRIDE:A6NDA9
Ensembl:ENST00000372113 GeneID:340745 KEGG:hsa:340745
UCSC:uc001kcy.3 GeneCards:GC10M085971 HGNC:HGNC:23443 HPA:HPA037788
neXtProt:NX_A6NDA9 PharmGKB:PA162394344 eggNOG:NOG331103
InParanoid:A6NDA9 GenomeRNAi:340745 NextBio:98010
ArrayExpress:A6NDA9 Bgee:A6NDA9 CleanEx:HS_LRIT2
Genevestigator:A6NDA9 Uniprot:A6NDA9
Length = 550
Score = 296 (109.3 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 97/345 (28%), Positives = 156/345 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
C C C + + ++C L IP E QV + + L +P+ +F +
Sbjct: 24 CLPGCTCSEESFGRTLQCTSVSLGKIPGNLSEEFKQVR-IENSPLFEMPQGSF--INMST 80
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L+L +I I GAL+ L L E+ L N L S+P F++ LR L+L RN I
Sbjct: 81 LEYLWLNFNNISVIHLGALEHLPELRELRLEGNKLCSVPWTAFRATPLLRVLDLKRNKID 140
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ + A QF+ L LD+S +RL +S F + + + P E +L
Sbjct: 141 ALPELALQFLVSLTYLDLSSNRLTVVSKSVFLNWPAYQKCRQ--------PDCGAE-ILS 191
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-----QPACTGPERLSGKVFSDLHADDF 251
+++ LHDNPWVCDC +R + ++ +PV C GP +G++F +
Sbjct: 192 SLVVALHDNPWVCDCRLRGLVQFVKSI-TLPVILVNSYLICQGPLSKAGQLFHETELS-- 248
Query: 252 AC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI 310
AC KP+I S + + +N T+ C + P +I+W + S ++ V+
Sbjct: 249 ACMKPQISTPSANITIRAGQNVTLRCLAQASPSPSIAWTY---------PLSMWREFDVL 299
Query: 311 EQ--GEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
GE S L + A DSG + C+A N G ++ +L V
Sbjct: 300 TSSTGEDTALSELAIPAAHLVDSGNYTCMASNSIGKSNLVISLHV 344
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 297 (109.6 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 94/333 (28%), Positives = 156/333 (46%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARCHI-GQIDSGAL 95
L +P S L ++ + +L I +P AF+R L +L+ L + + + + +L
Sbjct: 189 LTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKR--LFHLKHLEIDYWPLLDMMPANSL 246
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + +++ L+++P L F+ + +L LNL+ NPIS IE G F + L +L +
Sbjct: 247 YGL-NLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIV 305
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
++L I P +F G + L + ++ N L L ++ +++NP CDC +
Sbjct: 306 GAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRL-- 363
Query: 216 IKMWLADKKNV----PVQPACTGPERLSGKVFSDLHADD----FACK-PEIRMDSRYVEA 266
+W+ ++ QP C GP+ + + F D H+ F CK P+IR + +
Sbjct: 364 --LWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIR-EKKLQHL 420
Query: 267 VSSENATVV--CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ E TV C D P ISW R + S R V+ G E +
Sbjct: 421 LVDEGQTVQLECSADGDPQPVISWVTPRRRFITT---KSNGRATVLGDGTLE------IR 471
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQVTYRG 357
AQ+ DSG + C+A N AG + FT +T +G
Sbjct: 472 FAQDQDSGMYVCIASNAAG--NDTFTASLTVKG 502
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/190 (30%), Positives = 94/190 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + + C + LI IPE E T++LD+S N L+ + E F LL
Sbjct: 28 CPARCECSAQNKS--VSCHRRRLIAIPEGIPIE-TKILDLSKNRLKSVNPEEFISYPLL- 83
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+++ L+ I ++ GA + L NL + L N L +P F + L L+++ N I
Sbjct: 84 -EEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIV 142
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 143 ILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRS 202
Query: 197 LMMIEL-HDN 205
L+ + L H N
Sbjct: 203 LISLHLKHLN 212
Score = 148 (57.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 41/153 (26%), Positives = 75/153 (49%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
L + +D+S N + + AF L NL+ L L + + G GL+NL ++D+S+N
Sbjct: 82 LLEEIDLSDNIIANVEPGAFNN--LFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISEN 139
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
+ + FQ + L+ L + N + I AF + L +L + + L + EA +
Sbjct: 140 KIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSH 199
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
+SL S+ L +++ PV + + L L +E+
Sbjct: 200 LRSLISLHLKHLNINNMPVYAFKRLFHLKHLEI 232
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 296 (109.3 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 95/335 (28%), Positives = 158/335 (47%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARC-HIG 88
+E D L TIP L+++ ++ N ++ +P +AF R L +L++L L +
Sbjct: 130 LELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSR--LPSLRRLDLGELKRLS 187
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I SGA GL+NL ++L L +P++ Q + L +L ++ N ++ I+ +F+ +
Sbjct: 188 YISSGAFQGLSNLRYLNLGMCNLKEVPNI--QPLIRLDELEMSGNQLTVIQPSSFKGLVH 245
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL M ++++ I +F SL + L N L+ P PL L + LH NPW
Sbjct: 246 LQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHLHHNPWN 305
Query: 209 CDCNMRSIKMWLADKKNVPVQPAC----TGPERLSGKVFSDLHADDFAC-KPEI---RMD 260
C+C++ + WL ++ VP +C P L G+ +L F C P I +D
Sbjct: 306 CNCDILWLSWWL--RETVPTNTSCCARCNSPPSLKGRYIGELDQSYFQCYAPVIIEPPVD 363
Query: 261 SRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKS 319
E +++E + CR +S+ ++SW NG ++ + T RI V G
Sbjct: 364 LNLTEGMAAE---LKCRTNSV--TSVSWLTPNGSIITHGTL---KMRINVQNDG------ 409
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+L TN D+G + C N G A+ L VT
Sbjct: 410 TLNFTNVTLQDTGTYTCYVSNMLGNTSASAILNVT 444
Score = 268 (99.4 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 66/190 (34%), Positives = 108/190 (56%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C + L +P+ + T+ L++ N +Q++ ++F+ L +
Sbjct: 48 CPSVCSCSNQFSK--VICTRRGLKDVPDGVSTN-TRYLNLQDNQIQVIKVDSFKH--LRH 102
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+R HI I+ GA +GLT+L ++L DN LT+IP+ F+ + L++L L NPI
Sbjct: 103 LEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIE 162
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF +P L +LD+ E RL +IS AF G +L + L L P +++PL+
Sbjct: 163 SIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVP--NIQPLI 220
Query: 196 KLMMIELHDN 205
+L +E+ N
Sbjct: 221 RLDELEMSGN 230
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 295 (108.9 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 73/261 (27%), Positives = 127/261 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C G ++C L +P++ P T+ L+++GNN+ + K F +GL
Sbjct: 41 CPPLCACS---GTT-VDCHGTALRAVPKSIPRG--TERLELNGNNITRIHKNDF--SGLK 92
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L I ++ GA D + L + L+ N L ++P L FQ + L L+L+ N I
Sbjct: 93 QLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFI 152
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ L L + ++++ I AF + LE + LN N ++ PV S +
Sbjct: 153 QAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMP 212
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKP 255
KL LH N CDC++ + WL + + + C P +L G +++ ++F+C
Sbjct: 213 KLRTFRLHSNHLFCDCHLAWLAQWLRQRPTIGLFTQCAAPAQLRGLNVAEIQKNEFSCSG 272
Query: 256 EIRMDSRYVEAVSSENATVVC 276
+ + ++SS + +C
Sbjct: 273 QADGVHAQLCSLSSGSCPAMC 293
Score = 185 (70.2 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 52/180 (28%), Positives = 89/180 (49%)
Query: 105 DLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISP 164
DLS+N ++ I FQ +R L L L N I+ + KG F + L L ++ +++ +
Sbjct: 352 DLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNANKINCVRA 411
Query: 165 EAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD-- 222
+AF ++L + L N++ + L + + L NP+VCDCN++ WLAD
Sbjct: 412 DAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLK----WLADFL 467
Query: 223 KKNVPVQPA---CTGPERLSGKVFSDLHADDFAC--KPEIRMDSRYVEAVSSE-NATVVC 276
+ N P++ + C P RL+ K + + F C K + + ++SE N+ VVC
Sbjct: 468 RAN-PIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVC 526
Score = 143 (55.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 47/171 (27%), Positives = 87/171 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQV-LDMSGNNLQILPKEAF----R 70
CP+ C C G ++CR K L IP PE+ +T++ L+++G ++ +P AF +
Sbjct: 289 CPAMCTCS--NGI--VDCRGKGLTAIPANLPET-MTEIRLELNG--IKSIPPGAFSPYKK 341
Query: 71 RAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130
+L L L+ I +I A GL +L + L N +T +P F + L+ L L
Sbjct: 342 LRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLL 401
Query: 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
N I+ + AFQ + L L + +++++ ++ FT ++++++ L N
Sbjct: 402 NANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 452
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/164 (25%), Positives = 73/164 (44%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L +L +I+LS+N ++ I + L +P+ GA L
Sbjct: 571 TGIFKKLPHLKKINLSNNKVSEIEGIHHAGAIGTNVGPLWGHPLPASRAGAVFCWAQLQP 630
Query: 152 LDM-SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCD 210
L M +R+ I ++FTG +++ + L N++S + + L L + L NP+ C+
Sbjct: 631 LGMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCN 690
Query: 211 CNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
C + + WL +K V P C P+ L D+ DF C+
Sbjct: 691 CQLAWLGDWLRKRKIVTGNPRCQHPDFLRQIPLQDVAFPDFRCE 734
Score = 48 (22.0 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 515 SNDKTPIIDGVSIGGELDDNYPPDYGLPI 543
SN+K I+G+ G + N P +G P+
Sbjct: 586 SNNKVSEIEGIHHAGAIGTNVGPLWGHPL 614
Score = 39 (18.8 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP-----VNALKRVLSRGSPD 589
G+G + P N+ +R+ G+ +PP L+R+L G D
Sbjct: 304 GKGLTAI-PANLPETMTEIRLELNGIKSIPPGAFSPYKKLRRILPLGFRD 352
Score = 37 (18.1 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 278 VDSIPPAAISWYWNGRLLL 296
+ SIPP A S Y R +L
Sbjct: 328 IKSIPPGAFSPYKKLRRIL 346
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 269 (99.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 63/197 (31%), Positives = 101/197 (51%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N ++ L AF+ G +L+ L+L+ + + G+LD + NL + L N L+
Sbjct: 150 ILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLS 207
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
S PS +R + +L L+ NP+ I AFQ F L L + + LE S AF+G
Sbjct: 208 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVT 267
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+ + L+ NRL+ P S P L + L +NPW C C +R ++ WL K + P
Sbjct: 268 TLKHVHLDNNRLNQLP--SSFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKASRP-DAT 324
Query: 232 CTGPERLSGKVFSDLHA 248
C+ P + G+ D A
Sbjct: 325 CSSPAKFKGQRIRDTDA 341
Score = 199 (75.1 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 57/189 (30%), Positives = 91/189 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C G Q + C L IP+ SE T++L++ NN +L +FR + N
Sbjct: 22 CPQNCHCH--GDLQHVICDKVGLQKIPKV--SETTKLLNLQRNNFPVLAANSFRT--MPN 75
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C+I ++ +GA GL LI + LS N + + + F + L L L N +S
Sbjct: 76 LVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVS 135
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ +G + L L ++ +++ + AF GAK L + L+ N LS S++ +
Sbjct: 136 ELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVEN 195
Query: 197 LMMIELHDN 205
L L N
Sbjct: 196 LAKFHLDKN 204
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 44/147 (29%), Positives = 72/147 (48%)
Query: 60 NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTF 119
N++ + AFR GL L L+L+ I + +GA D LT L + L N ++ +P
Sbjct: 85 NIREVAAGAFR--GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLL 142
Query: 120 QSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLN 179
+ L L L N I ++ GAFQ L L +SE+ L + P + ++L L+
Sbjct: 143 SPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLD 202
Query: 180 GNRLSHFPVRSVEPLLKLMMIELHDNP 206
N+LS +P ++ L + ++L NP
Sbjct: 203 KNQLSSYPSAALSKLRVVEELKLSHNP 229
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N++++L AF L L L+L + ++ G L L NL + L++N +
Sbjct: 103 LYLSHNDIRVLRAGAFD--DLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRE 160
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ + FQ + LR L L+ N +S ++ G+ V L K + +++L A + + +
Sbjct: 161 LRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVV 220
Query: 174 ESIKLNGNRLSHFP 187
E +KL+ N L P
Sbjct: 221 EELKLSHNPLKSIP 234
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 291 (107.5 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 91/331 (27%), Positives = 154/331 (46%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D +L IP L+++ ++ N ++ +P AF R +L +L L +
Sbjct: 128 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLMRLDLGELKKLE 185
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL NL ++L + +P+LT + L +L ++ N +I G+F +
Sbjct: 186 YISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLVGLEELEMSGNHFPEIRPGSFHGLSS 243
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + S++ I AF G SL + L N LS P PL L+ + LH NPW
Sbjct: 244 LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFACKPEIRMDS-RY 263
CDC++ + WL ++ +P C G P + G+ ++ F C MD+ R
Sbjct: 304 CDCDILWLAWWL--REYIPTNSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMDAPRD 361
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVL 323
+ A + CR P +++ W +L++ S + RI V+ G +L
Sbjct: 362 LNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHA--SRHPRISVLNDG------TLNF 411
Query: 324 TNAQESDSGRFYCVAENRAGIADANFTLQVT 354
++ SD+G + C+ N AG ++A+ L V+
Sbjct: 412 SHVLLSDTGVYTCMVTNVAGNSNASAYLNVS 442
Score = 263 (97.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 70/190 (36%), Positives = 106/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C + L +P+ S T+ L++ NN+Q++ + FR L +
Sbjct: 46 CPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSN-TRYLNLMENNIQMIQADTFRH--LHH 100
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L R I QI+ GA +GL +L ++L DN LT IPS F+ + LR+L L NPI
Sbjct: 101 LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 160
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF VP L++LD+ E +LE+IS AF G +L+ + L + P ++ PL+
Sbjct: 161 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPLV 218
Query: 196 KLMMIELHDN 205
L +E+ N
Sbjct: 219 GLEELEMSGN 228
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 298 (110.0 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 96/331 (29%), Positives = 149/331 (45%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D L +P L+++ ++ N ++ LP AF R +L++L L +
Sbjct: 140 LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVP--SLRRLDLGELRKLS 197
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I A +GL NL ++L L +P+LT VR L +L L+ N + + G+FQ +
Sbjct: 198 FISEAAFEGLLNLRFLNLGMCGLKDVPNLT-PLVR-LEELELSGNQLGVVRPGSFQGLVS 255
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + SR+ I AF K+LE + L+ N L P PL +L + L+ NPWV
Sbjct: 256 LRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWV 315
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFAC-KPEIRMDSRY 263
C+C++ + WL K+ VP C P G+ DL DF C P I
Sbjct: 316 CNCDVLWLSWWL--KETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTD 373
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVL 323
+ A + CR + +++W L+ + A+ RI V+ G +L
Sbjct: 374 LNVTEGMAAELKCRTGT-SMTSVNWLTPNGTLMTHGAYKV--RISVLHDG------TLNF 424
Query: 324 TNAQESDSGRFYCVAENRAGIADANFTLQVT 354
TN D+G + C+ N AG A L V+
Sbjct: 425 TNVTMQDTGPYTCMVTNSAGNTTATAVLNVS 455
Score = 254 (94.5 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 67/190 (35%), Positives = 105/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + + + C K L +P++ S T+ L++ N++Q++ + F+ L +
Sbjct: 58 CPALCSCSNQASR--VICTKKSLNEVPQSISSN-TRYLNLQENSIQVIRSDTFKH--LNH 112
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L++ I QI+ GA +GL NLI ++L DN L +PS F+ + LR+L L NPI
Sbjct: 113 LEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIE 172
Query: 137 KIEKGAFQFVPGLVKLDMSESR-LEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ AF VP L +LD+ E R L IS AF G +L + L L P ++ PL+
Sbjct: 173 TLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVP--NLTPLV 230
Query: 196 KLMMIELHDN 205
+L +EL N
Sbjct: 231 RLEELELSGN 240
Score = 38 (18.4 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 459 NKTLHSVINISNPD 472
N T +V+N+S PD
Sbjct: 445 NTTATAVLNVSAPD 458
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 289 (106.8 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 103/332 (31%), Positives = 155/332 (46%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQ-IDSGALDG 97
L T+P + L + + +L I +A GL L+ L + R + + + AL G
Sbjct: 188 LSTVPTHALAHLHGLTSLRLRDLGIAELQAHTFKGLPRLKHLEVDRWPLLEGFPTSALQG 247
Query: 98 LTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES 157
L NL + ++ LTS+P +T ++ +L LNL+ + I + G + + L L + ++
Sbjct: 248 L-NLSTLSITHTNLTSVPVVT--NLLYLTHLNLSYSRIRVLPAGWLRGMDRLEVLRVRQA 304
Query: 158 RLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK-LMMIELHDNPWVCDCNMRSI 216
L + P+AF GA SL + L NRL+ RSV P+ + L + + NP VCDC +R
Sbjct: 305 NLLSVEPQAFQGASSLRILDLCYNRLATLE-RSVFPVTEALQTLLIGQNPLVCDCRLR-- 361
Query: 217 KMWLADKKNV----PVQPACTGPERLSGKVFSDLHADDFA----C-KPE-IRMDSRYVEA 266
WL ++ VQP C+ P L+GK DL + C KP I M S +A
Sbjct: 362 --WLLERTPPLLYGDVQPECSAPAPLAGKPLRDLVEAQISRYVICTKPRVISMASYPAQA 419
Query: 267 VSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA 326
+ A + C D PP ++SW L + S R+ V G SL A
Sbjct: 420 EEGQRAWLYCSADGAPPPSVSWLTP---LRRHITTKSTGRVVVHTNG------SLEFRMA 470
Query: 327 QESDSGRFYCVAENRAGIADANFTLQVTYRGV 358
+ DSG + CVA N AG A + TL V G+
Sbjct: 471 EPQDSGMYVCVASNPAGNATLSVTLAVKTSGI 502
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/188 (27%), Positives = 90/188 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + + C + L +PE E T+ LD+S N L+I+ + F + LL
Sbjct: 27 CPARCECSVP--TRSVSCHRRRLAQVPEGIPIE-TRSLDLSKNRLRIVTPQNF--SSLLL 81
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L+ + ++ + L + L N LT +P + L L++++N +
Sbjct: 82 LEELDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLV 141
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ F+ L L++S++ L I+P AF+G SL S+ L LS P ++ L
Sbjct: 142 ILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRSLTLQRCNLSTVPTHALAHLHG 201
Query: 197 LMMIELHD 204
L + L D
Sbjct: 202 LTSLRLRD 209
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 35 RDKFLITIPEAPESELT-QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
+++ I P+ S L + LD+S N L + +FR L+ L L + + G
Sbjct: 65 KNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPNSFRAQP--RLRSLRLRSNQLTLLPRG 122
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLD 153
AL GL+ L +D+S N L + F+ R LR L L+ N + I AF + L L
Sbjct: 123 ALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRSLT 182
Query: 154 MSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
+ L + A L S++L ++ + + L +L +E+
Sbjct: 183 LQRCNLSTVPTHALAHLHGLTSLRLRDLGIAELQAHTFKGLPRLKHLEV 231
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 289 (106.8 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 91/338 (26%), Positives = 154/338 (45%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D +L IP L+++ ++ N ++ +P AF R +L +L L +
Sbjct: 127 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLMRLDLGELKKLE 184
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL NL ++L + +P+LT + L +L ++ N +I G+F +
Sbjct: 185 YISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLVGLEELEMSGNHFPEIRPGSFHGLSS 242
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + S++ I AF G SL + L N LS P PL L+ + LH NPW
Sbjct: 243 LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 302
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFACKPEIRMDS-RY 263
CDC++ + WL ++ +P C G P + G+ ++ F C MD+ R
Sbjct: 303 CDCDILWLAWWL--REYIPTNSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMDAPRD 360
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVL 323
+ A + CR P +++ W +L++ S + RI V+ G L++
Sbjct: 361 LNISEDRMAELKCRTP--PMSSVKWLLPNGTVLSHA--SRHPRISVLNDGTLNFSRVLLI 416
Query: 324 TNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
D+G + C+ N AG ++A+ L V+ + P
Sbjct: 417 ------DTGVYTCMVTNVAGNSNASAYLNVSSAELNTP 448
Score = 262 (97.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 70/190 (36%), Positives = 106/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C + L +P+ S T+ L++ NN+Q++ + FR L +
Sbjct: 45 CPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSN-TRYLNLMENNIQMIQADTFRH--LHH 99
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L R I QI+ GA +GL +L ++L DN LT IPS F+ + LR+L L NPI
Sbjct: 100 LEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 159
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF VP L++LD+ E +LE+IS AF G +L+ + L + P ++ PL+
Sbjct: 160 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPLV 217
Query: 196 KLMMIELHDN 205
L +E+ N
Sbjct: 218 GLEELEMSGN 227
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 284 (105.0 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 69/202 (34%), Positives = 105/202 (51%)
Query: 50 LTQVLDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
L + LD+S N L+ + F GL L L L RC + ++ G GL L + L D
Sbjct: 106 LLEQLDLSDNAQLRSVDPATFH--GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 163
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N L ++P TF+ + L L L N IS + + AF+ + L +L + ++R+ H+ P AF
Sbjct: 164 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 223
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV 228
L ++ L N LS P ++ PL L + L+DNPWVCDC R + WL +
Sbjct: 224 DLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSS 283
Query: 229 QPACTGPERLSGKVFSDLHADD 250
+ C+ P+RL+G+ L A+D
Sbjct: 284 EVPCSLPQRLAGRDLKRLAAND 305
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 56/190 (29%), Positives = 93/190 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C + K C + L +P + +Q + + GN + +P +FR N
Sbjct: 27 CPGACVC-YNEPKVTTSCPQQGLQAVPVGIPAA-SQRIFLHGNRISHVPAASFRACR--N 82
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNPI 135
L L+L + +ID+ A GL L ++DLSDN L S+ TF + L L+L R +
Sbjct: 83 LTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL 142
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
++ G F+ + L L + ++ L+ + + F +L + L+GNR+S P R+ L
Sbjct: 143 QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 202
Query: 196 KLMMIELHDN 205
L + LH N
Sbjct: 203 SLDRLLLHQN 212
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 265 (98.3 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 63/197 (31%), Positives = 99/197 (50%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N ++ L AF+ G +L+ L+L+ + + G+LD + NL + L N L+
Sbjct: 150 ILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLS 207
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
S PS +R + +L L+ NP+ I AFQ F L L + + LE S AF G
Sbjct: 208 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFAGVT 267
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+ + L NRL+ P S P L + L +NPW C C +R ++ WL K + P
Sbjct: 268 TLKHVHLENNRLNQLP--STFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKTSRP-DAT 324
Query: 232 CTGPERLSGKVFSDLHA 248
C+ P + G+ D A
Sbjct: 325 CSSPAKFKGQRIRDTDA 341
Score = 193 (73.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 56/189 (29%), Positives = 90/189 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C G Q + C L IP+ SE T++L++ NN +L +FR N
Sbjct: 22 CPQNCHCH--GDLQHVICDKVGLQKIPKV--SETTKLLNLQRNNFPVLAANSFRTVP--N 75
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C+I ++ +GA GL LI + LS N + + + F + L L L N +S
Sbjct: 76 LVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVS 135
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ +G + L L ++ +++ + AF GAK L + L+ N L+ S++ +
Sbjct: 136 ELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVEN 195
Query: 197 LMMIELHDN 205
L L N
Sbjct: 196 LAKFHLDRN 204
Score = 144 (55.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 44/147 (29%), Positives = 72/147 (48%)
Query: 60 NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTF 119
N++ + AFR GL L L+L+ I + +GA D LT L + L N ++ +P
Sbjct: 85 NIREVAAGAFR--GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLL 142
Query: 120 QSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLN 179
+ L L L N I ++ GAFQ L L +SE+ L + P + ++L L+
Sbjct: 143 SPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLD 202
Query: 180 GNRLSHFPVRSVEPLLKLMMIELHDNP 206
N+LS +P ++ L + ++L NP
Sbjct: 203 RNQLSSYPSAALSKLRVVEELKLSHNP 229
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 36/134 (26%), Positives = 65/134 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N++++L AF L L L+L + ++ G L L NL + L++N +
Sbjct: 103 LYLSHNDIRVLRAGAFD--DLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRE 160
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ + FQ + LR L L+ N ++ + G+ V L K + ++L A + + +
Sbjct: 161 LRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVV 220
Query: 174 ESIKLNGNRLSHFP 187
E +KL+ N L P
Sbjct: 221 EELKLSHNPLKSIP 234
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 44/159 (27%), Positives = 74/159 (46%)
Query: 48 SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
+ELT L + N + LP+ + L+NL L L I ++ +GA G +L + LS
Sbjct: 122 TELTY-LYLDHNKVSELPRGLL--SPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLS 178
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF 167
+N LTS+ + V L +L RN +S A + + +L +S + L+ I AF
Sbjct: 179 ENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAF 238
Query: 168 TG-AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ LE++ L+ L F + + L + L +N
Sbjct: 239 QSFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENN 277
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 265 (98.3 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 66/204 (32%), Positives = 102/204 (50%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N ++ L AF+ G +L+ L+L+ + + GALD + NL + + N L+
Sbjct: 151 ILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLS 208
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
S PS +R + +L L+ NP+ I AFQ F L L + + LE S AF G
Sbjct: 209 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVT 268
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+ + L NRL+ P S P L + L +NPW C C +R ++ WL K + P
Sbjct: 269 TLKHVHLENNRLNQLP--SNFPFDSLETLALTNNPWKCTCQLRGLRRWLEAKASRP-DAT 325
Query: 232 CTGPERLSGKVFSDLHADDF-ACK 254
C P + G+ D D F +CK
Sbjct: 326 CASPAKFKGQHIRD--TDAFRSCK 347
Score = 182 (69.1 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 53/189 (28%), Positives = 89/189 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C Q + C L IP+ SE T++L++ NN +L +FR + N
Sbjct: 23 CPQNCHCH--SDLQHVICDKVGLQKIPKV--SEKTKLLNLQRNNFPVLAANSFR--AMPN 76
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C I ++ +GA GL LI + LS N + + + F + L L L N ++
Sbjct: 77 LVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVT 136
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ +G + L L ++ +++ + AF GAK L + L+ N LS +++ +
Sbjct: 137 ELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVEN 196
Query: 197 LMMIELHDN 205
L + N
Sbjct: 197 LAKFHVDRN 205
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
AFR GL L L+L+ I + +GA D LT L + L N +T +P + L
Sbjct: 94 AFR--GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFI 151
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L L N I ++ GAFQ L L +SE+ L + P A ++L ++ N+LS +P
Sbjct: 152 LQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYP 211
Query: 188 VRSVEPLLKLMMIELHDNP 206
++ L + ++L NP
Sbjct: 212 SAALSKLRVVEELKLSHNP 230
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N++++L AF L L L+L + ++ G L L NL + L++N +
Sbjct: 104 LYLSHNDIRVLRAGAFD--DLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRE 161
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ + FQ + LR L L+ N +S ++ GA V L K + ++L A + + +
Sbjct: 162 LRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVV 221
Query: 174 ESIKLNGNRLSHFP 187
E +KL+ N L P
Sbjct: 222 EELKLSHNPLKSIP 235
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 287 (106.1 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 91/338 (26%), Positives = 154/338 (45%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D +L IP L+++ ++ N ++ +P AF R +L +L L +
Sbjct: 127 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLMRLDLGELKKLE 184
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
I GA +GL NL ++L + +P+LT + L +L ++ N +I G+F +
Sbjct: 185 YISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLVGLEELEMSGNHFPEIRPGSFHGLSS 242
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L KL + S++ I AF G SL + L N LS P PL L+ + LH NPW
Sbjct: 243 LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 302
Query: 209 CDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADDFACKPEIRMDS-RY 263
CDC++ + WL ++ +P C G P + G+ ++ F C MD+ R
Sbjct: 303 CDCDILWLAWWL--REYIPTNSTCCGRCHAPMHMRGRYLVEVDQAAFQCSAPFIMDAPRD 360
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVL 323
+ A + CR P +++ W +L++ S + RI V+ G L++
Sbjct: 361 LNISEDRMAELKCRTP--PMSSVKWLLPNGTVLSHA--SRHPRISVLNDGTLNFSRVLLI 416
Query: 324 TNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
D+G + C+ N AG ++A+ L V+ + P
Sbjct: 417 ------DTGVYTCMVTNVAGNSNASAYLNVSSAELNTP 448
Score = 263 (97.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 70/190 (36%), Positives = 106/190 (55%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + K + C + L +P+ S T+ L++ NN+Q++ + FR L +
Sbjct: 45 CPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSN-TRYLNLMENNIQMIQADTFRH--LHH 99
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L R I QI+ GA +GL +L ++L DN LT IPS F+ + LR+L L NPI
Sbjct: 100 LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 159
Query: 137 KIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I AF VP L++LD+ E +LE+IS AF G +L+ + L + P ++ PL+
Sbjct: 160 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPLV 217
Query: 196 KLMMIELHDN 205
L +E+ N
Sbjct: 218 GLEELEMSGN 227
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 292 (107.8 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 72/247 (29%), Positives = 116/247 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C G ++C+ + T+P P + + LD+ NN+ + K F +GL
Sbjct: 25 CPHKCSCS---GSH-VDCQGQAFKTVPRGIPRN--AERLDLDRNNITRITKVDF--SGLK 76
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+ L L I I+ GA +GL L I L+ N L +P L FQS L L+L+ N I
Sbjct: 77 NLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQI 136
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + AF+ + + L + + + I AF + LE + LN N ++ P+ S +
Sbjct: 137 QAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIPLSSFNHMP 196
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKP 255
KL + LH N CDC++ + WL ++ + C P + G D+ +F C
Sbjct: 197 KLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQCMAPAHMRGLNVPDVQKREFVCTG 256
Query: 256 EIRMDSR 262
+ + R
Sbjct: 257 PVETEPR 263
Score = 191 (72.3 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+GA L NL +I+LS+N L I F + +L L N + + F+ + GL
Sbjct: 542 TGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKT 601
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +++ + FTG S+ + L NR+S + L L I L NP+VCDC
Sbjct: 602 LMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCDC 661
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
++ + +WL + V P C P L D+ DF+C
Sbjct: 662 HLAWLGLWLKKTRVVSGNPRCQKPAFLKEIPIQDVAMPDFSC 703
Score = 188 (71.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 55/196 (28%), Positives = 91/196 (46%)
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI 162
E+ L NLLTS+P +++ L L+L+ N IS + F + L L +S +++ +
Sbjct: 749 ELYLEGNLLTSVPK-ELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCV 807
Query: 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD 222
AF G +SL + L+GN LS P + L L + L NP CDC +R + W+
Sbjct: 808 PVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPLYCDCELRWLSQWVKA 867
Query: 223 KKNVPVQPACTGPERLSGKVFSDLHADDFACK-P-EIRMDSRYVEAVSS---ENATVVCR 277
P CTGP ++ ++ + F CK P ++ + S+ +++ N T V
Sbjct: 868 GFKEPGIARCTGPPDMADRLLLTTPLNRFQCKGPADLNLMSKCAPCLATPCQNNGTCVSD 927
Query: 278 VDSIPPAAISWYWNGR 293
V + + GR
Sbjct: 928 VTGSYHCTCPFGYKGR 943
Score = 183 (69.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I +GA L IDLS N ++ I F +R L L L N I++I KG F +
Sbjct: 311 IKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGL 370
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L ++ +++ + F ++L + L N+L PL + + L NP
Sbjct: 371 VSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQNP 430
Query: 207 WVCDCNMRSIKMWLADKK-NVPVQPA---CTGPERLSGKVFSDLHADDFAC 253
++CDC+++ WLAD + P++ + C+ P RL+ K S + F C
Sbjct: 431 FMCDCHLK----WLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRC 477
Score = 164 (62.8 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 52/167 (31%), Positives = 83/167 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKE-AFRRAGL 74
CP C C+ G ++C + L IP PE T L ++ N + IL AF++ L
Sbjct: 497 CPERCRCE---GTV-VDCSNLKLTKIPPHLPEH--TTDLRLNDNEISILEATGAFKK--L 548
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
NL+K+ L+ + I GA DG ++E+ L+ N L S+ F+ + L+ L L N
Sbjct: 549 PNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQ 608
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS ++ F + + L + ++R+ I+P AF SL +I L N
Sbjct: 609 ISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
Score = 144 (55.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 31/105 (29%), Positives = 61/105 (58%)
Query: 101 LIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLE 160
++EI L N++ +IP+ F + + L+ ++L++N IS+I + AF + L L + +++
Sbjct: 301 IVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIA 360
Query: 161 HISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
I F G SL+ + LN N+++ V + + L L ++ L+DN
Sbjct: 361 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDN 405
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 32/106 (30%), Positives = 58/106 (54%)
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+D LT IP+ + + +R L +N I I GAF L ++D+S++++ I+
Sbjct: 283 VDCRRKGLTEIPANLPEGIVEIR---LEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIA 339
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVC 209
+AF+G +SL S+ L GN+++ P + L+ L ++ L+ N C
Sbjct: 340 EDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNANKINC 385
Score = 128 (50.1 bits), Expect = 0.00032, P = 0.00032
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP +C C + + C ++ L ++P+ + T+ L + GN L +PKE L
Sbjct: 718 CPESCTCS----ETVVRCSNRGLRSLPKTIPKDTTE-LYLEGNLLTSVPKEL---PNLKQ 769
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+ I + +T L + LS N + +P F +R LR L L N +S
Sbjct: 770 LTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLS 829
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +GAF + L L + + L
Sbjct: 830 TVPEGAFNHLTSLSHLALGANPL 852
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 264 (98.0 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 67/204 (32%), Positives = 100/204 (49%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N ++ L AF+ G +L+ L+L+ + + GALD + NL + L N L+
Sbjct: 153 ILQLNNNKIRELRSGAFQ--GAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLS 210
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
S PS +R + +L L+ NP+ I AFQ F L L + + LE S AF G
Sbjct: 211 SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVT 270
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+ + L NRL P S P L + L +NPW C C +R ++ WL K + P
Sbjct: 271 TLKHVHLENNRLHQLP--SNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSRP-DAT 327
Query: 232 CTGPERLSGKVFSDLHADDF-ACK 254
C P + G+ D D F CK
Sbjct: 328 CASPAKFRGQHIRD--TDAFRGCK 349
Score = 183 (69.5 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C Q + C L IP+ SE T++L++ NN +L +FR + N
Sbjct: 25 CPQNCHCH--SDLQHVICDKVGLQKIPKV--SEKTKLLNLQRNNFPVLATNSFR--AMPN 78
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C I ++ +GA GL LI + LS N + + + F + L L L N ++
Sbjct: 79 LVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVT 138
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ +G + L L ++ +++ + AF GAK L + L+ N LS +++ +
Sbjct: 139 ELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVEN 198
Query: 197 LMMIELHDN 205
L L N
Sbjct: 199 LAKFYLDRN 207
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/139 (32%), Positives = 68/139 (48%)
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
AFR GL L L+L+ I + +GA D LT L + L N +T +P + L
Sbjct: 96 AFR--GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFI 153
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L L N I ++ GAFQ L L +SE+ L + P A ++L L+ N+LS +P
Sbjct: 154 LQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYP 213
Query: 188 VRSVEPLLKLMMIELHDNP 206
++ L + ++L NP
Sbjct: 214 SAALSKLRVVEELKLSHNP 232
Score = 143 (55.4 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 39/134 (29%), Positives = 66/134 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N++++L AF L L L+L + ++ G L L NL + L++N +
Sbjct: 106 LYLSHNDIRVLRAGAFD--DLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRE 163
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ S FQ + LR L L+ N +S ++ GA V L K + ++L A + + +
Sbjct: 164 LRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVV 223
Query: 174 ESIKLNGNRLSHFP 187
E +KL+ N L P
Sbjct: 224 EELKLSHNPLKSIP 237
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 277 (102.6 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 73/241 (30%), Positives = 111/241 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L +P P + T+ LD++GNN+ + K F AGL
Sbjct: 28 CPAQCSCS---GST-VDCHGLALRIVPRNIPRN--TERLDLNGNNITRITKTDF--AGLR 79
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L I I+ GA L L + L+ N L P L F L L+L+ N I
Sbjct: 80 HLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + +++ I AF + LE + LN N ++ V S +
Sbjct: 140 QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMP 199
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKP 255
KL LH N CDC++ + WL + V + C GP L G +++ +F C
Sbjct: 200 KLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSD 259
Query: 256 E 256
E
Sbjct: 260 E 260
Score = 195 (73.7 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 69/275 (25%), Positives = 121/275 (44%)
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+ ++ L + I I GA L +DLS+N ++ + FQ +R L L L N I+
Sbjct: 306 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 365
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ K F+ + L L ++ +++ + +AF +L + L N+L + L
Sbjct: 366 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA 425
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKVFSDLHADDFA 252
+ + L NP++CDC+++ WLAD + P++ + CT P RL+ K + + F
Sbjct: 426 IQTMHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 481
Query: 253 CK--PEIRM--------DSRYVEAVSSENATVVC---RVDSIPPAAISWYWNGRLLLNNT 299
C + R D E E TV C +++ IP I Y L LNN
Sbjct: 482 CSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDH-IPQY-TAELRLNNN 539
Query: 300 AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334
F+ + + ++ RK +L + + G F
Sbjct: 540 EFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAF 574
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 41/162 (25%), Positives = 75/162 (46%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L L +I+LS+N +T I F+ + ++ L N + ++ F+ + L
Sbjct: 547 TGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKT 606
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ + ++FTG S+ + L N+++ + L L + L NP+ C+C
Sbjct: 607 LMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNC 666
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
++ + WL K+ V P C P L D+ DF C
Sbjct: 667 HLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 708
Score = 140 (54.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 45/167 (26%), Positives = 83/167 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ G ++C ++ L IP+ P+ T L ++ N +L F++ L
Sbjct: 502 CPEKCRCE---GTT-VDCSNQKLNKIPDHIPQ--YTAELRLNNNEFTVLEATGIFKK--L 553
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+K+ L+ I I+ GA +G + + EI L+ N L ++ F+ + L+ L L N
Sbjct: 554 PQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 613
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS + +F + + L + ++++ ++P AF SL ++ L N
Sbjct: 614 ISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLAN 660
Score = 49 (22.3 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G E+ P N+ +R+ Q + V+PP
Sbjct: 292 GKGLTEI-PTNLPETITEIRLEQNSIRVIPP 321
>MGI|MGI:2141485 [details] [associations]
symbol:Lrtm2 "leucine-rich repeats and transmembrane domains
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2141485
GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 GeneTree:ENSGT00700000104083 HOGENOM:HOG000290674
CTD:654429 eggNOG:NOG248110 HOVERGEN:HBG081938 OMA:GEHEDQK
OrthoDB:EOG4C5CKK EMBL:AK039006 EMBL:AK045494 EMBL:BC058944
IPI:IPI00221765 RefSeq:NP_001165678.1 RefSeq:NP_766080.1
UniGene:Mm.121498 ProteinModelPortal:Q8BGX3 SMR:Q8BGX3
PhosphoSite:Q8BGX3 PaxDb:Q8BGX3 PRIDE:Q8BGX3
Ensembl:ENSMUST00000068351 Ensembl:ENSMUST00000112756
Ensembl:ENSMUST00000168793 GeneID:211187 KEGG:mmu:211187
UCSC:uc009dmb.2 InParanoid:Q8BGX3 NextBio:373160 Bgee:Q8BGX3
CleanEx:MM_LRTM2 Genevestigator:Q8BGX3
GermOnline:ENSMUSG00000055003 Uniprot:Q8BGX3
Length = 370
Score = 265 (98.3 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 74/233 (31%), Positives = 108/233 (46%)
Query: 19 STCICKWKGGKQWMECRDKFLIT--IPEAP-----ESELTQVLDMSGNNLQILPKEAFRR 71
S + +W+ W+ C IP P +S +V D SG L +P +
Sbjct: 12 SKLVLQWRQ-VSWITCWIALCAVEVIPACPFSCTCDSRSLEV-DCSGLGLTTVPPDVPAA 69
Query: 72 AGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
Q L L + + S A L+NL +DLS+N L +P F+ + L +L L
Sbjct: 70 T-----QSLLLLNNKLSALPSWAFANLSNLQRLDLSNNFLDQLPRSIFEDLVNLTELQLR 124
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV 191
N I +++ Q P L LD+S + L + P F G +L S+ L NRL +
Sbjct: 125 NNSIRTLDRDLLQHSPLLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQSLDRLTF 184
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWL---ADKKNVPVQPACTGPERLSGK 241
EPL L ++++ DNPW CDCN+R K WL + + Q ACT P+ L GK
Sbjct: 185 EPLASLQLLQVGDNPWECDCNLREFKHWLEWFSYRGGRLDQLACTLPKELRGK 237
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 292 (107.8 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 79/263 (30%), Positives = 126/263 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L IP P + T+ L+++GNNL + + F GL
Sbjct: 27 CPALCTCS---GTT-VDCHGLGLKNIPRNIPRN--TERLELNGNNLTRINRNDF--TGLK 78
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L I ++ GA D + L + L+ N L +P L FQ L L+L+ N I
Sbjct: 79 YLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSENFI 138
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + ++ + I AF + LE + LN N +S PV S +
Sbjct: 139 QAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISSIPVSSFNHMP 198
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKP 255
KL LH N VCDC + + WL ++ N+ + C+ P L G +++ +F+C
Sbjct: 199 KLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGLFTQCSSPAPLRGLNVAEVQKHEFSCSG 258
Query: 256 EIRMDSRYVEA--VSSENATVVC 276
+ DS ++ +SS + VC
Sbjct: 259 Q--SDSAVGQSCSLSSGSCPAVC 279
Score = 199 (75.1 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 47/164 (28%), Positives = 80/164 (48%)
Query: 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
GA LT+L +I+LS+N ++ I F+ + +L+L N + G F+ + GL L
Sbjct: 552 GAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRML 611
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCN 212
+ +R+ I +FTG ++ + L N L+ + + L L + L NP+ C+C
Sbjct: 612 MLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPFNCNCR 671
Query: 213 MRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE 256
+ + WL ++K V P C P L D+ A DF C+ +
Sbjct: 672 LAWLSSWLRNRKIVTGNPRCHRPAFLKEIPLQDVAAPDFRCEDD 715
Score = 195 (73.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 52/213 (24%), Positives = 96/213 (45%)
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
++ ++ L + I I GA L IDLS+N ++ + FQ +R L L L N I
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + +G F + L L ++ +++ + F ++L + L N++ + L
Sbjct: 363 TDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLR 422
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADK-KNVPVQPA---CTGPERLSGKVFSDLHADDF 251
+ + L NP++CDCN++ WLAD ++ P++ + CT P RL+ K + + F
Sbjct: 423 AIQTLHLAQNPFICDCNLK----WLADYLRSNPIETSGARCTSPRRLANKRIGQIKSKKF 478
Query: 252 ACKPEIRMDSRYVEAVSSENATVVCRVDSIPPA 284
C + + + C D + PA
Sbjct: 479 RCSAK---EQYAIPGTEDSRLNNDCNNDPVCPA 508
Score = 181 (68.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N L+++P S + L+ ++L+ N IS + +F + L L +S + L
Sbjct: 755 NITELYLDGNQLSTVPK-ELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNAL 813
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF+G +SL + L+GN +S P L + + NP CDC +R + W
Sbjct: 814 RCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGANPLHCDCGLRWLSDW 873
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEI 257
+ P C P + GK+ A F C+ E+
Sbjct: 874 VKTGYKEPGIARCASPHGMEGKLLLTTPAKRFECQGEV 911
Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/143 (29%), Positives = 69/143 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + + C +K L +P+ +T+ L + GN L +PKE + +
Sbjct: 727 CPADCTCL----ESVVRCSNKHLQALPKGTPRNITE-LYLDGNQLSTVPKEL---SSFKS 778
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ + L+ I + + + ++ L + LS N L IP+L F +R LR L+L N IS
Sbjct: 779 LQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDIS 838
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
++ G F L L + + L
Sbjct: 839 ELPDGIFSDAQSLSHLAIGANPL 861
Score = 146 (56.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 47/166 (28%), Positives = 83/166 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE-AFRRAGLL 75
CP+ C C+ ++C + L IPE + T+ ++ N + + AF+ L
Sbjct: 506 CPAKCRCE----SNVVDCSNLRLDRIPEHVPASTTEPR-LNNNEITTIEAMGAFKT--LT 558
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+K+ L+ I +I+ GA +G +++ E+ L+ N L S F+ + LR L L N I
Sbjct: 559 HLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRI 618
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
S I +F + + L + ++ L I+P AF +SL ++ L N
Sbjct: 619 SCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLAN 664
Score = 46 (21.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+++ + L+GN+LS P + + L +++L +N
Sbjct: 754 RNITELYLDGNQLSTVP-KELSSFKSLQLVDLSNN 787
Score = 41 (19.5 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G L+P+++ + +R+ Q + +PP
Sbjct: 290 GKGPT-LIPSSLPDSMTEIRLEQNSIKSIPP 319
Score = 38 (18.4 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 278 VDSIPPAAISWYWNGRLL-LNNTAFS 302
+ SIPP A S Y R + L+N S
Sbjct: 314 IKSIPPGAFSPYKKLRRIDLSNNQIS 339
>ZFIN|ZDB-GENE-050522-160 [details] [associations]
symbol:lrit2 "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 2" species:7955
"Danio rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-050522-160 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:P07359 EMBL:BC095086 IPI:IPI00493555 RefSeq:NP_001018372.2
UniGene:Dr.82810 ProteinModelPortal:Q504C1 GeneID:553557
KEGG:dre:553557 CTD:340745 HOGENOM:HOG000082676 HOVERGEN:HBG060406
InParanoid:Q504C1 OrthoDB:EOG4X97H6 NextBio:20880298 Uniprot:Q504C1
Length = 561
Score = 278 (102.9 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 94/342 (27%), Positives = 151/342 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
C C C + + C + L IP+ +LT++ + + L LP+ F L
Sbjct: 23 CFPGCSCGTDRHGRSLTCMETALTGIPDGLPEDLTKIR-IEKSQLSELPEAVFSHVKAL- 80
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+ L+L I I+ +L+GL NL E+ L N L S+P F+ L+ L+L N I
Sbjct: 81 -KHLWLNFNDIAIINIKSLEGLANLTELRLQGNKLRSVPWTAFEETPNLKILDLKHNRID 139
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ + A +F+PGL LD+S ++L IS + F LN L H + +P
Sbjct: 140 ALPEHALKFLPGLTYLDLSSNQLSVISKDVF----------LNWP-LYHSENKHEKPSAS 188
Query: 197 LMMIELHDNPWVCDCNMRS----IKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFA 252
+++ LHDNPW+CDC + IK + C+ PE +G+ F ++ D
Sbjct: 189 NVVLALHDNPWLCDCRLGGFIEFIKSLTPPFILMNSYLTCSSPELKAGRFFHEV--DLKT 246
Query: 253 C-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIE 311
C KP + + A N T+ C + P A I W + ++L F R +
Sbjct: 247 CVKPVVSAPVITITAPLGGNVTLTCSASARPEAVIRWIYALKML---RGF----RDILSH 299
Query: 312 QGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
E S LV+ + +D G + C+A N G + ++ V
Sbjct: 300 VDEDTISSQLVIPSLHSADRGLYTCIANNFLGNSSVIISVDV 341
Score = 41 (19.5 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 447 STEMISPNGQLPNKTLHSVI-N--ISNPDLIN--DTRKPEGLSPEPHNDDVLF--QNNYW 499
S++++ P+ ++ L++ I N + N +I D + PEG S P +N Y
Sbjct: 306 SSQLVIPSLHSADRGLYTCIANNFLGNSSVIISVDVKSPEGSSSHPSGPSAAIGEENVYI 365
Query: 500 NQNIRQPT 507
+ I + T
Sbjct: 366 DIRIAKQT 373
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 262 (97.3 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 76/281 (27%), Positives = 134/281 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPE--SELTQVLDMSGNNL-QILPKEAFRRAG 73
CPS C C +EC I I E P+ ++ TQ + + N + QI ++ +
Sbjct: 24 CPSGCRCY----SLTVECGS---IGIKEIPQGITQGTQTIFLQDNAIGQIRQRDL---SD 73
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L L L+L I ++ GA L L+E+ L+ N + I + F+ + LR L LA N
Sbjct: 74 LGQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRILYLAGN 133
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I+++E F+ + L +L + E+ LE + +A G SL + L+ N L S++P
Sbjct: 134 QINRLEDYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLDLSRNNLRTLSPASLKP 193
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-----CTGPERLSGKVFSDLHA 248
L+ L ++ + DNPW CDC + ++ W+ ++ + A C P RLS ++
Sbjct: 194 LVSLQVLRVTDNPWRCDCALHWLRGWINEEGQRLLSSAERRMLCAEPPRLSHLSLVEVPP 253
Query: 249 DDFAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISW 288
+ C P ++++ ++ E+ V C+ P ++W
Sbjct: 254 NSLVCIPPVVQLEPSHLTVRLGESLRVSCQASGYPQPQVTW 294
Score = 59 (25.8 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L L+N + +GR+ C A N G+A F L V
Sbjct: 364 LFLSNVTVAHAGRYECEAWNPGGVARVTFHLSV 396
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 271 (100.5 bits), Expect = 8.8e-21, P = 8.8e-21
Identities = 67/202 (33%), Positives = 102/202 (50%)
Query: 50 LTQVLDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
L + LD+S N L+++ FR GL +L L L RC + ++ G GL L + L D
Sbjct: 106 LLEQLDLSDNAQLRVVDPTTFR--GLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 163
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N L ++P TF+ + L L L N I + + AF+ + L +L + ++ + + P AF
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV 228
L ++ L N LS P + PL L + L+DNPWVCDC R + WL +
Sbjct: 224 DLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSS 283
Query: 229 QPACTGPERLSGKVFSDLHADD 250
+ C P+RL+G+ L A D
Sbjct: 284 EVPCNLPQRLAGRDLKRLAASD 305
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 55/191 (28%), Positives = 91/191 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C+C + K C + L +P P S +Q + + GN + +P +F+
Sbjct: 27 CPGACVC-YNEPKVTTSCPQQGLQAVPTGIPAS--SQRIFLHGNRISYVPAASFQSCR-- 81
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNP 134
NL L+L + ID+ A GLT L ++DLSDN L + TF+ + L L+L R
Sbjct: 82 NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCG 141
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+ ++ G F+ + L L + ++ L+ + F +L + L+GNR+ P + L
Sbjct: 142 LQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGL 201
Query: 195 LKLMMIELHDN 205
L + LH N
Sbjct: 202 HSLDRLLLHQN 212
>UNIPROTKB|I3LDA4 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0020037 "heme binding" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0004601
"peroxidase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006979 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10
GeneTree:ENSGT00550000074325 CTD:7837 OMA:EPVITWN EMBL:FP102546
EMBL:FP565715 RefSeq:XP_003125453.3 Ensembl:ENSSSCT00000022979
GeneID:100516076 KEGG:ssc:100516076 Uniprot:I3LDA4
Length = 1479
Score = 283 (104.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 79/283 (27%), Positives = 135/283 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I +I GA GL NL + L++N + SIPS +F+ + L+ L L +N I I++ AFQ +
Sbjct: 74 IREIQPGAFKGLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSIDRQAFQGL 133
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L +L + +++E + PE+F LE + L+ NR+++ + L + + L N
Sbjct: 134 ASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITYLVPGTFNHLESMKRLRLDSNA 193
Query: 207 WVCDCNMRSIKMWLAD-------KKNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIR 258
CDC + +WLAD N C P R+ G+ + + ++ C +P I
Sbjct: 194 LRCDCEI----LWLADLLKTYARSGNAQAAATCEYPRRIQGRSVATITPEELDCERPRIT 249
Query: 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ + + CR + P I W N N + ++ R+ +++ G
Sbjct: 250 SEPQDADVTLGNTVFFTCRAEGNPKPEIIWLRNN----NELSMAADSRLNLLDDG----- 300
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
+L++ N +E+D G + C+A+N AG A T VT R G P
Sbjct: 301 -TLMIQNTREADQGVYQCMAKNVAGEAK---TQGVTLRYFGSP 339
Score = 189 (71.6 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 52/168 (30%), Positives = 84/168 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C+C + + C L +P AP+ T +LD+ N ++ + AF+ GL
Sbjct: 36 CPSRCLCF----RTTVRCMHLLLEAVPAVAPQ---TSILDLRFNRIREIQPGAFK--GLR 86
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL L L I I SG+ + L NL + L N + SI FQ + L L L N I
Sbjct: 87 NLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSIDRQAFQGLASLEQLYLHFNQI 146
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
++ +FQ +P L +L + +R+ ++ P F +S++ ++L+ N L
Sbjct: 147 ETLDPESFQHLPKLERLFLHNNRITYLVPGTFNHLESMKRLRLDSNAL 194
Score = 121 (47.7 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+DL N + I F+ +R L L L N I I G+F+ + L L + ++ ++ I
Sbjct: 67 LDLRFNRIREIQPGAFKGLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSID 126
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+AF G SLE + L+ N++ S + L KL + LH+N
Sbjct: 127 RQAFQGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNN 168
Score = 65 (27.9 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 309 VIEQGEYE--RKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGV---GLPFL 363
V E G++ + L + + +D+GR+ CVA N G A + L V V G PF+
Sbjct: 565 VTESGKFHISPEGFLTIHDVGTADAGRYECVARNTMGQASVSMLLSVNVPDVSRNGDPFV 624
Score = 65 (27.9 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 21/87 (24%), Positives = 34/87 (39%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
+P + + E + E+ T+ C PP I+W G + T R+ + G
Sbjct: 341 RPAFVIQPQNTEVLVGESVTLECSATGHPPPRITWT-RG----DGTPVPVDPRVSITPSG 395
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAEN 340
L + N + DSG + C A N
Sbjct: 396 ------GLYIQNVVQEDSGEYTCFAAN 416
Score = 46 (21.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 542 PIVGQGQNELLPNNIHP 558
P+ G G LL N+++P
Sbjct: 883 PVCGSGMTSLLMNSVYP 899
>UNIPROTKB|F1Q057 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EPVITWN
EMBL:AAEX03010629 EMBL:AAEX03010630 EMBL:AAEX03010631
EMBL:AAEX03010632 EMBL:AAEX03010633 EMBL:AAEX03010634
PeroxiBase:10035 Ensembl:ENSCAFT00000005177 Uniprot:F1Q057
Length = 1408
Score = 282 (104.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 80/283 (28%), Positives = 137/283 (48%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I +I GA L NL + L++N + SIP +F+ + L+ L L +N I I++ AF+ +
Sbjct: 7 IREIQPGAFRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDRQAFKGL 66
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L +L + +++E + PE+F LE + L+ NR++H + + L + + L N
Sbjct: 67 ASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFDHLESMKRLRLDSNA 126
Query: 207 WVCDCNMRSIKMWLAD-----KKNVPVQPA--CTGPERLSGKVFSDLHADDFAC-KPEIR 258
CDC + +WLAD K+ Q A C P R+ G+ + + ++ C +P I
Sbjct: 127 LHCDCEI----LWLADLLKTYAKSGNAQAAATCEYPRRIQGRSVATITPEELDCERPRIT 182
Query: 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ + + S CR + P I W N N + + R+ +++ G
Sbjct: 183 SEPQDADVTSGNTVFFTCRAEGNPKPEIIWLRNN----NELSMKTDSRLNLLDDG----- 233
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
+L++ N QE+D G + C+A+N AG T +VT R G P
Sbjct: 234 -TLMIQNTQETDQGIYQCMAKNVAGQVK---TQEVTLRYFGSP 272
Score = 143 (55.4 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 55 DMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI 114
D+ N ++ + AFR+ L NL L L I I G+ + L NL + L N + +I
Sbjct: 1 DLRFNRIREIQPGAFRK--LRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAI 58
Query: 115 PSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174
F+ + L L L N I ++ +FQ +P L +L + +R+ H+ P F +S++
Sbjct: 59 DRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFDHLESMK 118
Query: 175 SIKLNGNRL 183
++L+ N L
Sbjct: 119 RLRLDSNAL 127
Score = 116 (45.9 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 105 DLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISP 164
DL N + I F+ +R L L L N I I G+F+ + L L + ++ ++ I
Sbjct: 1 DLRFNRIREIQPGAFRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDR 60
Query: 165 EAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+AF G SLE + L+ N++ S + L KL + LH+N
Sbjct: 61 QAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNN 101
Score = 70 (29.7 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 21/87 (24%), Positives = 33/87 (37%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
+P + + E + E+ T+ C PP I+W R T R+ + G
Sbjct: 274 RPAFVIQPQNTEVLVGESVTLECSATGHPPPRITWTKGDR-----TPLPEDPRVSITPSG 328
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAEN 340
L + N + DSG + C A N
Sbjct: 329 ------GLFIQNVLQDDSGEYTCFASN 349
Score = 67 (28.6 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 309 VIEQGEYE--RKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGV---GLPFL 363
V E G++ + L + + +D+GR+ CVA N G A + L V+ V G PF+
Sbjct: 498 VTESGKFHISPEGFLTIHDVGTADAGRYECVARNTIGQASVSMVLSVSVPDVSRNGDPFV 557
Score = 46 (21.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 542 PIVGQGQNELLPNNIHP 558
P+ G G LL N+++P
Sbjct: 816 PVCGSGMTSLLMNSVYP 832
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 279 (103.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 72/238 (30%), Positives = 112/238 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L ++P + P + T+ LD++GNN+ + K F AGL
Sbjct: 28 CPAQCSCS---GST-VDCHGLALRSVPRSIPRN--TERLDLNGNNITRITKTDF--AGLR 79
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L I I+ GA L L + L+ N L P L F L L+L+ N I
Sbjct: 80 HLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + +++ I AF + LE + LN N ++ V S +
Sbjct: 140 QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMP 199
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + V + C GP L G +++ +F C
Sbjct: 200 KLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 194 (73.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 50/181 (27%), Positives = 89/181 (49%)
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+ ++ L + I I GA L IDLS+N ++ + FQ +R L L L N I+
Sbjct: 302 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ K F+ + L L ++ +++ + +AF +L + L N+L + PL
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 421
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKVFSDLHADDFA 252
+ + L NP++CDC+++ WLAD + P++ + CT P RL+ K + + F
Sbjct: 422 IQTMHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 477
Query: 253 C 253
C
Sbjct: 478 C 478
Score = 190 (71.9 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N T +P + + + L ++L+ N IS + +F + L+ L +S +RL
Sbjct: 755 DVTELYLDGNHFTLVPKELY-NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 813
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I P F G KSL + L+GN +S P + L L + + NP CDCNM+ + W
Sbjct: 814 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSDW 873
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + P C GP ++ K+ + F C+
Sbjct: 874 VKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ 908
Score = 161 (61.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L L +I+ S+N +T I F+ + ++ L N + ++ F+ + L
Sbjct: 551 TGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKT 610
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ + ++F G S+ + L N+++ + + L L + L NP+ C+C
Sbjct: 611 LMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNC 670
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
+ + WL K+ V P C P L D+ DF C
Sbjct: 671 YLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 712
Score = 144 (55.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + C +K L +P+ ++T+ L + GN+ ++PKE + +
Sbjct: 727 CPTECTCL----DTVVRCSNKGLKVLPKGIPRDVTE-LYLDGNHFTLVPKELYNYK---H 778
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L + L+ I + + + +T L+ + LS N L IP TF ++ LR L+L N IS
Sbjct: 779 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 838
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +GAF + L L + + L
Sbjct: 839 VVPEGAFSDLSALSHLAIGANPL 861
Score = 138 (53.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 45/167 (26%), Positives = 81/167 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ G ++C ++ L IP+ P+ T L ++ N +L F++ L
Sbjct: 506 CPEKCRCE---GTT-VDCSNQKLTKIPDHIPQ--YTAELRLNNNEFTVLEATGIFKK--L 557
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+K+ + I I+ GA +G + EI L+ N L ++ F+ + L+ L L N
Sbjct: 558 PQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 617
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS + +F + + L + ++++ I+P AF SL ++ L N
Sbjct: 618 ISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 664
Score = 50 (22.7 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G E+ P N+ +R+ Q + V+PP
Sbjct: 288 GKGLTEI-PTNLPETITEIRLEQNSIKVIPP 317
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 270 (100.1 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 76/304 (25%), Positives = 142/304 (46%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
+ Q L +S N + + +A+ L +L L H+ ++D + GL+ L + + +N
Sbjct: 288 MLQELHLSQNAINRISPDAWEFCQ--KLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNN 345
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPIS-KIE--KGAFQFVPGLVKLDMSESRLEHISPEA 166
++ I F+ + L+ L+L N IS IE GAF + L +L + +R+ I+ +A
Sbjct: 346 RVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKA 405
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV 226
FTG +LE + L+ N + + + KL + L+ + +CDC ++ + W+A+
Sbjct: 406 FTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLLCDCQLKWLPQWVAENNFQ 465
Query: 227 P-VQPACTGPERLSGKVFSDLHADDFAC----KPEIRMDSRYVEAVSSENATVVCRVDSI 281
V +C P+ L G+ + D F C KP+I + A+ N + +C S
Sbjct: 466 SFVNASCAHPQLLKGRSIFAVSPDGFVCDDFPKPQITVQPETQSAIKGSNLSFICSAASS 525
Query: 282 PPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGEY-ERKSSLVLTNAQESDSGRFYCVAE 339
+ +++ W LL++ +Y + + GE E + L L + + G++ CV
Sbjct: 526 SDSPMTFAWKKDNELLHDAEMENYAHLRA-QGGEVMEYTTILRLREVEFASEGKYQCVIS 584
Query: 340 NRAG 343
N G
Sbjct: 585 NHFG 588
Score = 153 (58.9 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 41/154 (26%), Positives = 81/154 (52%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L+++ N ++ + F+ GL L+ L + R + ++ GA GL+N+ + L N L
Sbjct: 218 QHLELNRNKIKNVDGLTFQ--GLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNL 275
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T I + L++L+L++N I++I A++F L +LD++ + L + +F G
Sbjct: 276 TEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLS 335
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
L ++ + NR+S+ + L L ++L +N
Sbjct: 336 LLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNN 369
Score = 131 (51.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 40/131 (30%), Positives = 68/131 (51%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L M N + L AF GL N++ L L ++ +I G L GL L E+ LS N +
Sbjct: 244 LKMQRNGVTKLMDGAFW--GLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINR 301
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I ++ + L +L+L N +S+++ +F + L L + +R+ +I+ AF G SL
Sbjct: 302 ISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSL 361
Query: 174 ESIKLNGNRLS 184
+++ L N +S
Sbjct: 362 KTLDLKNNEIS 372
Score = 131 (51.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 54/191 (28%), Positives = 96/191 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+TC C G ++C K L +PE S + + LD+S N L + +A + L +
Sbjct: 47 CPTTCRCL--G--DLLDCSRKRLARLPEPLPSWVAR-LDLSHNRLSFI--KASSMSHLQS 99
Query: 77 LQKLFLARCHIGQIDS-GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+++ L + I + G + N+ + L+ N + I + + L L+L+ N I
Sbjct: 100 LREVKLNNNELETIPNLGPVSA--NITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNI 157
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG-AKSLESIKLNGNRLSHFPVRSVEPL 194
S+++ AF + L L ++ +R+ + P F A +L +KLN NR+S P + + L
Sbjct: 158 SELQT-AFPALQ-LKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFK-L 214
Query: 195 LKLMMIELHDN 205
+L +EL+ N
Sbjct: 215 PQLQHLELNRN 225
Score = 56 (24.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 323 LTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+ + + D G + C A+N AG AN TL V
Sbjct: 663 IVDVKIEDIGVYSCTAQNSAGSISANATLTV 693
Score = 53 (23.7 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L++ ++ SD+G++ C N G N L V
Sbjct: 752 LIIVDSDVSDAGKYTCEMSNTLGTERGNVRLSV 784
>UNIPROTKB|Q50LG9 [details] [associations]
symbol:LRRC24 "Leucine-rich repeat-containing protein 24"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
EMBL:AB178281 EMBL:AC084125 EMBL:BC111067 IPI:IPI00455850
RefSeq:NP_001019849.2 UniGene:Hs.459391 UniGene:Hs.740859
ProteinModelPortal:Q50LG9 SMR:Q50LG9 DMDM:296434571 PaxDb:Q50LG9
PRIDE:Q50LG9 Ensembl:ENST00000529415 GeneID:441381 KEGG:hsa:441381
UCSC:uc003zdm.3 CTD:441381 GeneCards:GC08M145747 HGNC:HGNC:28947
HPA:HPA037689 neXtProt:NX_Q50LG9 PharmGKB:PA142671520
HOGENOM:HOG000234857 HOVERGEN:HBG079563 InParanoid:Q50LG9
OMA:NITLAHA OrthoDB:EOG4DR9CG GenomeRNAi:441381 NextBio:110128
ArrayExpress:Q50LG9 Bgee:Q50LG9 CleanEx:HS_LRRC24
Genevestigator:Q50LG9 GermOnline:ENSG00000177021 Uniprot:Q50LG9
Length = 513
Score = 269 (99.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 86/348 (24%), Positives = 152/348 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C +EC L +P P TQ L + NN+ L A A L
Sbjct: 23 CPAACRCY----SATVECGALRLRVVPLGIPPG--TQTLFLQDNNIARLEPGAL--APLA 74
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L++L+L + +++GA L+E+ L+ N L + S F + LR L LA N +
Sbjct: 75 ALRRLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQLRVLYLAGNQL 134
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+++ F +P L +L + E+ +E + +A G SL + L+ N+L +++PL
Sbjct: 135 ARLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISREALQPLA 194
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLAD--KKNVPVQPA---CTGPERLSGKVFSDLHADD 250
L ++ L +NPW CDC + + W+ + ++ + + C P RL+ + D+
Sbjct: 195 SLQVLRLTENPWRCDCALHWLGAWIKEGGQRLLTSRDRKIMCAEPPRLALQSLLDVSHSS 254
Query: 251 FAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFV 309
C P + + + A E+ V C+ P ++W + + +
Sbjct: 255 LICIPPSVHVQPLELTANLGEDLRVACQASGYPQPLVTWRKVPQPREGRPRAQAQLEGGL 314
Query: 310 IEQGEYERKSS----LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+ G + + L L+N + +G++ C A N G A F L V
Sbjct: 315 LGLGGHSASDTGSGMLFLSNITLAHAGKYECEASNAGGAARVPFRLLV 362
>ZFIN|ZDB-GENE-041210-129 [details] [associations]
symbol:lrrc4.1 "leucine rich repeat containing 4.1"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041210-129 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
InterPro:IPR026882 PANTHER:PTHR24369:SF9 EMBL:BX855622
UniGene:Dr.114688 UniGene:Dr.159965 Ensembl:ENSDART00000140028
OMA:ILTHASW Uniprot:I7HJH4
Length = 858
Score = 273 (101.2 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 92/336 (27%), Positives = 155/336 (46%)
Query: 32 MECRDKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCH-IG 88
+E D L +P L+++ ++ N ++ +P AF R +L +L L +
Sbjct: 126 LELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLMRLDLGELRKLE 183
Query: 89 QIDSGALDGLTNLIEIDLSD-NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP 147
I GA +GL NL ++L N+ +P+ T + L +L ++ N +I+ G+F+ +
Sbjct: 184 YISDGAFEGLVNLKYLNLGMCNIRGEMPNFT--PLVGLEELEISENLFPEIKPGSFRGLS 241
Query: 148 GLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPW 207
L KL + S++ I AF SL + L N LS P PL L+ + LH NPW
Sbjct: 242 SLKKLWIMNSQIGLIERNAFDDLASLVELNLAHNNLSSLPHDLYTPLKYLVELHLHHNPW 301
Query: 208 VCDCNMRSIKMWLADKKNVPVQPACTG----PERLSGKVFSDLHADD---FACKPEIRMD 260
C C+ + WL ++ +P C G P + G+ +L D C D
Sbjct: 302 NCGCDSLWLARWL--REYIPTNSTCCGRCHSPAHMRGRQLVELDRGDTGAMQCSAPFIAD 359
Query: 261 SRYVEAVSSEN-ATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ +S+E A + CR ++ +A+ W NG +L T SS+ R+ V+ G
Sbjct: 360 APRDLNISAERVAELKCRTAAM--SAVRWLLPNGTIL---THASSHPRLTVLNDG----- 409
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+L +N D+G + C+ N AG ++A+ L V+
Sbjct: 410 -TLNFSNVLAGDTGMYTCMVSNAAGNSNASAYLNVS 444
Score = 245 (91.3 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 74/216 (34%), Positives = 115/216 (53%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + K + C + L +P S T+ L++ N ++ + ++FR L +
Sbjct: 44 CPTDCSCNNQLSK--VVCTRRGLTRVPPGIPST-TRHLNLMENAIESVQVDSFRN--LHH 98
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L R I QI+ GA GLTNL ++L DN LT +PS F+ + LR+L L NPI
Sbjct: 99 LEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIE 158
Query: 137 KIEKGAFQFVPGLVKLDMSESR-LEHISPEAFTGAKSLESIKLNG-NRLSHFPVRSVEPL 194
I AF VP L++LD+ E R LE+IS AF G +L+ + L N P + PL
Sbjct: 159 SIPSYAFNRVPSLMRLDLGELRKLEYISDGAFEGLVNLKYLNLGMCNIRGEMP--NFTPL 216
Query: 195 LKLMMIELHDN--PWVCDCNMRSI----KMWLADKK 224
+ L +E+ +N P + + R + K+W+ + +
Sbjct: 217 VGLEELEISENLFPEIKPGSFRGLSSLKKLWIMNSQ 252
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 276 (102.2 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 87/305 (28%), Positives = 134/305 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C ++C + L ++P P + + LD++ NNL + K F AGL
Sbjct: 21 CPSQCSCSGTA----VDCHGQSLRSVPRNIPRN--VERLDLNANNLTKITKADF--AGLK 72
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+ L L I I+ GA L L + L+ N L +P L F L L+L+ N I
Sbjct: 73 NLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQI 132
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + +++ I AF LE + LN N +S V S +
Sbjct: 133 QGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLSVASFNHMP 192
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK- 254
KL LH N +CDCN+ + WL + + + C P L G +++ +F C
Sbjct: 193 KLRTFRLHSNNLLCDCNVAWLSDWLRQRPRLGLYTQCMAPPSLRGHNIAEVQKKEFMCTG 252
Query: 255 PEIRMDSRYV---EAVSSENATVVCR---VDSIP---PAAISWY---WNGRLLLNNTAFS 302
P+ + E + N V CR + IP P I+ N ++ AF+
Sbjct: 253 PQSHSSCSVLQCPELCTCSNNVVDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFA 312
Query: 303 SYQRI 307
Y+R+
Sbjct: 313 PYKRL 317
Score = 210 (79.0 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 83/329 (25%), Positives = 140/329 (42%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
V+D G L +P + ++ L + I I +GA L IDLS+N +T
Sbjct: 274 VVDCRGKGLTEIPTNLPE-----TITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQIT 328
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ S +FQ +R L L L N I+++ KG F + L L ++ +++ + ++F ++
Sbjct: 329 ELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQN 388
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADK-KNVPVQPA 231
L + L N+L + L + + L NP++CDC+++ WLAD ++ P++ +
Sbjct: 389 LNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFMCDCHLK----WLADYLQDNPIETS 444
Query: 232 ---CTGPERLSGKVFSDLHADDFACK--PEIRM--------DSRYVEAVSSENATVVCRV 278
CT P RL+ K + + F C + R D E E TV C
Sbjct: 445 GARCTSPRRLANKRIGQIKSKKFRCSGVEDYRSKLGGDCFADLACPEKCRCEGTTVDCSG 504
Query: 279 DSIP--PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336
+ P I Y L LNN F+ + + ++ RK +L + + G F
Sbjct: 505 QKLTKIPDHIPQY-TAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTF-- 561
Query: 337 VAENRAGIADANFTLQVTYRGVGLPFLGG 365
E +G+ + T GV L G
Sbjct: 562 --EGASGVNELILTSN-RLEGVHYSMLKG 587
Score = 189 (71.6 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N T +P L + + L ++L+ N IS + +F + L+ L +S +RL
Sbjct: 738 DVTELYLDGNEFTQVP-LELSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRL 796
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I +AF G KSL + L+GN ++ P + + L L + L NP CDC+M+ + W
Sbjct: 797 RCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGANPLYCDCHMQWLSDW 856
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
+ P CTGP ++ K+ + F C
Sbjct: 857 VKSGYKEPGIARCTGPGDMTDKLLLTTPSKKFTC 890
Score = 183 (69.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 56/215 (26%), Positives = 92/215 (42%)
Query: 40 ITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+ PE E T V D SG L +P + L L +G L
Sbjct: 487 LACPEKCRCEGTTV-DCSGQKLTKIPDHIPQYTAELRLNNNEFTVLEA----TGIFKKLP 541
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L +I+LS+N +T I TF+ + +L L N + + + + GL L + +R+
Sbjct: 542 QLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRI 601
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
++ +FTG S+ + L N ++ + + L L + L NP+ C+C++ + W
Sbjct: 602 SCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEW 661
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
L K+ V P C P L D+ DFAC+
Sbjct: 662 LRKKRIVTGNPRCQSPYFLKEIPIQDVAVQDFACE 696
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 261 (96.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 90/317 (28%), Positives = 143/317 (45%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L ++P + L ++ + NL I + +F+R L L+ L +A ++ + + L
Sbjct: 200 LTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKR--LYRLKVLEIANWPYLDTMTTNCL 257
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + +++ LTSIP L + + +LR LN++ NPI IE + L +L +
Sbjct: 258 YGL-NLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQELYLV 316
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
RL I P +F G L+ + ++ N L+ + L + LHDNP CDC +
Sbjct: 317 GGRLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVFHSVGNLETLALHDNPLACDCRLLW 376
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFAC-KPEIRMDSRYVEAVS 268
+ + W + QP C+ PE + GK F D L + F C K IR D + +
Sbjct: 377 VFRRRWRLNFNRQ--QPTCSSPEFVQGKEFKDFPDILQPNYFTCRKSRIR-DRKPQQKFV 433
Query: 269 SENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA 326
E TV VC+ D P I W + + + R+ V G E + A
Sbjct: 434 DEGTTVHFVCQADGDPTPVIMWLSPQKQFIT---MKTIGRLTVFPDGTLE------VRYA 484
Query: 327 QESDSGRFYCVAENRAG 343
Q D+G + C+A N G
Sbjct: 485 QIQDNGTYGCIASNAGG 501
Score = 175 (66.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + ++ + C K L+++PE SE T++LD+S N ++ + + F +
Sbjct: 39 CPSRCECNVQ--ERSVLCHRKKLMSVPEGIPSE-TRLLDLSKNRIKTINPDEF--SAFPQ 93
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L I I+ GA + L L + L N L I F + L L+++ N I
Sbjct: 94 LEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIV 153
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L IS AF G SLE + L L+ P + L
Sbjct: 154 ILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHS 213
Query: 197 LMMIELHD 204
L+ + L +
Sbjct: 214 LVTLRLRN 221
Score = 152 (58.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 42/155 (27%), Positives = 76/155 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N + + AF L LQ L L + I G GL+NL ++D+S+N +
Sbjct: 97 LELNENTISAIEPGAFNN--LYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVI 154
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + LR L + N + I AF + L +L + + L + EAFT SL
Sbjct: 155 LLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSL 214
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
+++L ++ S + L +L ++E+ + P++
Sbjct: 215 VTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPYL 249
Score = 119 (46.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 85 CHIGQIDSGALDGLTNLIEI-DLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAF 143
CH ++ S +G+ + + DLS N + +I F + L +L L N IS IE GAF
Sbjct: 54 CHRKKLMS-VPEGIPSETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAF 112
Query: 144 QFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELH 203
+ GL L + ++L+ I FTG +L + ++ N++ + L L +E+
Sbjct: 113 NNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVG 172
Query: 204 DNPWV 208
DN V
Sbjct: 173 DNDLV 177
Score = 115 (45.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 35/137 (25%), Positives = 64/137 (46%)
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
L L++ I I+ L E++L++N +++I F ++ L+ L L N + I+
Sbjct: 73 LDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQ 132
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
G F + L KLD+SE+++ + F +L S+++ N L R+ L L
Sbjct: 133 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQ 192
Query: 200 IELHDNPWVCDCNMRSI 216
+ L CN+ S+
Sbjct: 193 LTLEK------CNLTSV 203
Score = 54 (24.1 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 446 HSTEMISPNGQLPNKTLHSVINISNPDLINDTR 478
HS PN PNKTL + N N + IN+TR
Sbjct: 512 HSYSPDWPNQ--PNKTLAFISNQPNDNSINETR 542
Score = 39 (18.8 bits), Expect = 9.9e-19, Sum P(2) = 9.9e-19
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 485 PEPHNDDVLFQNNYWNQNIRQPTNSELGFDSNDKTPII 522
P N + F +N N N T + + F + KT II
Sbjct: 519 PNQPNKTLAFISNQPNDNSINETRATVPFPFDIKTLII 556
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 258 (95.9 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 61/194 (31%), Positives = 101/194 (52%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L ++ N L+ L F+ G +L+ L+++ + I G+LD + NL + L N L+
Sbjct: 155 ILQLNNNKLRELQPGTFK--GAKDLRWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLS 212
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK 171
+ P L +R + +LNL++NP+S I AF+ F + KL +++ LE S AF G
Sbjct: 213 TYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGRYMEKLHLNDMSLEKFSNAAFEGVT 272
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
+L+S+ L N+L P S+E + I L +NPW C C + +++ W+ +N P
Sbjct: 273 ALKSLHLENNKLRSLP-NSLE-FSTIQNITLFNNPWSCTCPLTNLRKWMDTTRNRP-DAV 329
Query: 232 CTGPERLSGKVFSD 245
C P GK D
Sbjct: 330 CASPANQKGKQIRD 343
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 72/240 (30%), Positives = 114/240 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRA-GLL 75
CPS C C G Q + C + L IP SE T++L++ NNL LP F GL+
Sbjct: 27 CPSQCHCH--GDLQHVICDNVGLKKIPRI--SEATRLLNLQRNNLGNLPTGGFSEMKGLI 82
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L L C I ++ A GL LI + LSDN +++I F+ + L L L N I
Sbjct: 83 SLH---LQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYLYLDGNQI 139
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + KG F + L L ++ ++L + P F GAK L + ++GN LS S++ +
Sbjct: 140 TSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVE 199
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPE---RLSGKVFSDLHADDFA 252
L ++ L N + K+ + ++ N+ P P+ R G+ LH +D +
Sbjct: 200 NLAILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGRYMEKLHLNDMS 259
>MGI|MGI:1916925 [details] [associations]
symbol:Pxdn "peroxidasin homolog (Drosophila)" species:10090
"Mus musculus" [GO:0004601 "peroxidase activity" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0020037 "heme binding" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO;IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
MGI:MGI:1916925 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
HSSP:P21809 GO:GO:0005201 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084
HOVERGEN:HBG108312 CTD:7837 OMA:EPVITWN OrthoDB:EOG4J1179
EMBL:AK142872 EMBL:AC159626 EMBL:AC165078 EMBL:BC112913
IPI:IPI00461384 RefSeq:NP_852060.2 UniGene:Mm.251774
ProteinModelPortal:Q3UQ28 SMR:Q3UQ28 PhosphoSite:Q3UQ28
PaxDb:Q3UQ28 PRIDE:Q3UQ28 Ensembl:ENSMUST00000122328 GeneID:69675
KEGG:mmu:69675 UCSC:uc007ngl.2 InParanoid:Q3UQ28 NextBio:330062
Bgee:Q3UQ28 CleanEx:MM_PXDN Genevestigator:Q3UQ28 Uniprot:Q3UQ28
Length = 1475
Score = 279 (103.3 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 77/283 (27%), Positives = 134/283 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I +I GA L +L + L++N + IP+ F+ + L+ L L +N I I++ AF+ +
Sbjct: 71 IREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQAFKGL 130
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L +L + +++E + PE+F LE + L+ NR++H + L + + L N
Sbjct: 131 ASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLRLDSNA 190
Query: 207 WVCDCNMRSIKMWLAD-------KKNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIR 258
CDC + +WLAD N C P R+ G+ + + ++ C +P I
Sbjct: 191 LHCDCEI----LWLADLLKTYAQSGNAQAAATCEYPRRIQGRSVATITPEELNCERPRIT 246
Query: 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ + + S CR + P I W N N + + R+ +++ G
Sbjct: 247 SEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNN----NELSMKTDSRLNLLDDG----- 297
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
+L++ N QE+D G + C+A+N AG A T +VT R +G P
Sbjct: 298 -TLMIQNTQEADEGVYQCMAKNVAGEAK---TQEVTLRYLGSP 336
Score = 190 (71.9 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 52/168 (30%), Positives = 86/168 (51%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C+C + + C L +P AP+ T +LD+ N ++ + AFRR L
Sbjct: 33 CPSRCLCF----RTTVRCMHLLLEAVPAVAPQ---TSILDLRFNRIREIQPGAFRR--LR 83
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L L L I +I +GA + L NL + L N + SI F+ + L L L N I
Sbjct: 84 SLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQI 143
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
++ +FQ +P L +L + +R+ H+ P F+ +S++ ++L+ N L
Sbjct: 144 ETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLRLDSNAL 191
Score = 129 (50.5 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+DL N + I F+ +R L L L N I KI GAF+ + L L + ++ ++ I
Sbjct: 64 LDLRFNRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSID 123
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+AF G SLE + L+ N++ S + L KL + LH+N
Sbjct: 124 RQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNN 165
Score = 67 (28.6 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 309 VIEQGEYE--RKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
V E G++ + L + + +D+GR+ CVA N G A + L V
Sbjct: 562 VTESGKFHISPEGFLTINDVGTADAGRYECVARNTIGYASVSMVLSV 608
Score = 62 (26.9 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 21/87 (24%), Positives = 33/87 (37%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
+P + + E + E+ T+ C P I+W R T R+ + G
Sbjct: 338 RPTFVIQPQNTEVLVGESVTLECSATGHPLPQITWTRGDR-----TPLPIDPRVNITPSG 392
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAEN 340
L + N +SDSG + C A N
Sbjct: 393 ------GLYIQNVAQSDSGEYTCFASN 413
Score = 46 (21.3 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 542 PIVGQGQNELLPNNIHP 558
P+ G G LL N+++P
Sbjct: 880 PVCGSGMTSLLMNSVYP 896
Score = 39 (18.8 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 312 QGEYERKSSLVLTNAQESDSGRFYCVAE-----NRAGIADA 347
QGE E + Q ++SG+F+ E N G ADA
Sbjct: 546 QGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGTADA 586
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 276 (102.2 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 72/238 (30%), Positives = 111/238 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L ++P P + T+ LD++GNN+ + K F AGL
Sbjct: 28 CPAQCSCS---GST-VDCHGLALRSVPRNIPRN--TERLDLNGNNITRITKIDF--AGLR 79
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L I I+ GA L L + L+ N L P L F L L+L+ N I
Sbjct: 80 HLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + +++ I AF + LE + LN N ++ V S +
Sbjct: 140 QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMP 199
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + V + C GP L G +++ +F C
Sbjct: 200 KLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 194 (73.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 69/275 (25%), Positives = 120/275 (43%)
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+ ++ L + I I GA L +DLS+N ++ + FQ +R L L L N I+
Sbjct: 302 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ K F+ + L L ++ +++ + +AF +L + L N+L + L
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA 421
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKVFSDLHADDFA 252
+ + L NP++CDC+++ WLAD + P++ + CT P RL+ K + + F
Sbjct: 422 IQTMHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 477
Query: 253 CK--PEIRM--------DSRYVEAVSSENATVVC---RVDSIPPAAISWYWNGRLLLNNT 299
C + R D E E TV C R++ IP I Y L LNN
Sbjct: 478 CSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPDH-IPQY-TAELRLNNN 535
Query: 300 AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334
F+ + + ++ RK + + + G F
Sbjct: 536 EFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF 570
Score = 191 (72.3 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 45/155 (29%), Positives = 75/155 (48%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N T +P + + L ++L+ N IS + +F + L+ L +S +RL
Sbjct: 747 DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 805
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I P F G KSL + L+GN +S P + L L + + NP CDCNM+ + W
Sbjct: 806 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDW 865
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + P C GP ++ K+ + F C+
Sbjct: 866 VKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ 900
Score = 182 (69.1 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 69/270 (25%), Positives = 127/270 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C ++CR K L IP PE+ +T++ + N+++++P AF +
Sbjct: 273 CPAACTCS----NNIVDCRGKGLTEIPTNLPET-ITEIR-LEQNSIRVIPPGAF--SPYK 324
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L++L L+ I ++ A GL +L + L N +T +P F+ + L+ L L N I
Sbjct: 325 KLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 384
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + AFQ + L L + +++L+ ++ F+ ++++++ L N P + L
Sbjct: 385 NCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQN-----PF-ICDCHL 438
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGKVFSDLHADDFA 252
K + LH NP + LA+K+ ++ C+G E K+ D AD A
Sbjct: 439 KWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFAD-LA 497
Query: 253 CKPEIRMDSRYVEAVSSENATVVCRVDSIP 282
C + R + V+ S++ + D IP
Sbjct: 498 CPEKCRCEGTTVDC-SNQRLNKI--PDHIP 524
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/162 (24%), Positives = 74/162 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L L +I+ S+N +T I F+ + ++ L N + ++ F+ + L
Sbjct: 543 TGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKT 602
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ + ++F G S+ + L N+++ + + L L + L NP+ C+C
Sbjct: 603 LMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNC 662
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
++ + WL K+ V P C P L D+ DF C
Sbjct: 663 HLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 704
Score = 145 (56.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + C +K L +P+ ++T+ L + GN ++PKE + +
Sbjct: 719 CPSECTCL----DTVVRCSNKGLKVLPKGIPKDVTE-LYLDGNQFTLVPKEL---SNYKH 770
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L + L+ I + + + +T L+ + LS N L IP TF ++ LR L+L N IS
Sbjct: 771 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 830
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +GAF + L L + + L
Sbjct: 831 VVPEGAFNDLSALSHLAIGANPL 853
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 44/167 (26%), Positives = 82/167 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ G ++C ++ L IP+ P+ T L ++ N +L F++ L
Sbjct: 498 CPEKCRCE---GTT-VDCSNQRLNKIPDHIPQ--YTAELRLNNNEFTVLEATGIFKK--L 549
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+K+ + I I+ GA +G + + EI L+ N L ++ F+ + L+ L L N
Sbjct: 550 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 609
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS + +F + + L + ++++ ++P AF SL ++ L N
Sbjct: 610 ISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLAN 656
Score = 49 (22.3 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G E+ P N+ +R+ Q + V+PP
Sbjct: 288 GKGLTEI-PTNLPETITEIRLEQNSIRVIPP 317
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 277 (102.6 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 72/238 (30%), Positives = 111/238 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L ++P P + T+ LD++GNN+ + K F AGL
Sbjct: 28 CPAQCSCS---GST-VDCHGLALRSVPRNIPRN--TERLDLNGNNITRITKTDF--AGLR 79
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L I I+ GA L L + L+ N L P L F L L+L+ N I
Sbjct: 80 HLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQI 139
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + +++ I AF + LE + LN N ++ V S +
Sbjct: 140 QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMP 199
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + V + C GP L G +++ +F C
Sbjct: 200 KLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 193 (73.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 48/168 (28%), Positives = 83/168 (49%)
Query: 90 IDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGL 149
I GA L IDLS+N ++ + FQ +R L L L N I+++ K F+ + L
Sbjct: 315 IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 374
Query: 150 VKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVC 209
L ++ +++ + +AF +L + L N+L + PL + + L NP++C
Sbjct: 375 QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 434
Query: 210 DCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKVFSDLHADDFAC 253
DC+++ WLAD + P++ + CT P RL+ K + + F C
Sbjct: 435 DCHLK----WLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 478
Score = 191 (72.3 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 45/155 (29%), Positives = 75/155 (48%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N T +P + + L ++L+ N IS + +F + L+ L +S +RL
Sbjct: 755 DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 813
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I P F G KSL + L+GN +S P + L L + + NP CDCNM+ + W
Sbjct: 814 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDW 873
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + P C GP ++ K+ + F C+
Sbjct: 874 VKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ 908
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/214 (23%), Positives = 88/214 (41%)
Query: 40 ITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+ PE E T V D S L +P+ + L L +G L
Sbjct: 504 LACPEKCRCEGTTV-DCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEA----TGIFKKLP 558
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L +I+ S+N +T I F+ + ++ L N + ++ F+ + L L + +R+
Sbjct: 559 QLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRI 618
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ ++F G S+ + L N+++ + + L L + L NP+ C+C + + W
Sbjct: 619 TCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEW 678
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
L K+ V P C P L D+ DF C
Sbjct: 679 LRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 712
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + C +K L +P+ ++T+ L + GN ++PKE + +
Sbjct: 727 CPTECTCL----DTVVRCSNKGLKVLPKGIPRDVTE-LYLDGNQFTLVPKEL---SNYKH 778
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L + L+ I + + + +T L+ + LS N L IP TF ++ LR L+L N IS
Sbjct: 779 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 838
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +GAF + L L + + L
Sbjct: 839 VVPEGAFNDLSALSHLAIGANPL 861
Score = 138 (53.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 56 MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115
+ G+N+ + K F +G Q C + + A +N I +D LT IP
Sbjct: 242 LRGHNVAEVQKREFVCSGH---QSFMAPSCSV--LHCPAACTCSNNI-VDCRGKGLTEIP 295
Query: 116 SLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLES 175
+ +++ +R L +N I I GAF L ++D+S +++ ++P+AF G +SL S
Sbjct: 296 TNLPETITEIR---LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 352
Query: 176 IKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVC 209
+ L GN+++ P E L L ++ L+ N C
Sbjct: 353 LVLYGNKITELPKSLFEGLFSLQLLLLNANKINC 386
Score = 126 (49.4 bits), Expect = 0.00053, P = 0.00053
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 101 LIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLE 160
+ EI L N + IP F + LR ++L+ N IS++ AFQ + L L + +++
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 161 HISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ F G SL+ + LN N+++ V + + L L ++ L+DN
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDN 406
Score = 48 (22.0 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G E+ P N+ +R+ Q + V+PP
Sbjct: 288 GKGLTEI-PTNLPETITEIRLEQNTIKVIPP 317
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 265 (98.3 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 75/300 (25%), Positives = 138/300 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N + + +A+ L +L L H+ ++D + GL+ L + + +N ++
Sbjct: 292 LHLSQNAINRISPDAWEFCQ--KLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSY 349
Query: 114 IPSLTFQSVRFLRDLNLARNPIS-KIE--KGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
I F+ + L+ L+L N IS IE GAF + L +L + +R+ I+ +AF G
Sbjct: 350 IADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGL 409
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVP-VQ 229
+LE + L+GN + + + KL + L+ + +CDC +R + W+A+ V
Sbjct: 410 DTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLLCDCQLRWLPQWVAENNFQSFVN 469
Query: 230 PACTGPERLSGKVFSDLHADDFAC----KPEIRMDSRYVEAVSSENATVVCRVDSIPPAA 285
+C P+ L G+ + D F C KP+I + A+ + + C S +
Sbjct: 470 ASCAHPQLLKGRSIFTVSPDGFVCDDFPKPQITVQPETQSAIKGSDVSFTCSAASSSDSP 529
Query: 286 ISWYWN-GRLLLNNTAFSSYQRIFVIEQGEY-ERKSSLVLTNAQESDSGRFYCVAENRAG 343
+++ W L + +Y + + GE E + L L N + + G++ CV N G
Sbjct: 530 MTFAWKKDNEALQDAEMENYAHLRA-QGGELMEYTTILRLRNVEFTSEGKYQCVISNHFG 588
Score = 157 (60.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 41/154 (26%), Positives = 81/154 (52%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L+++ N ++ + F+ GL L+ L + R + ++ GA GL+N+ + L N L
Sbjct: 218 QHLELNRNKIKNVDGLTFQ--GLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNL 275
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T I + LR+L+L++N I++I A++F L +LD++ + L + +F G
Sbjct: 276 TEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLS 335
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
L ++ + N++S+ + L L ++L +N
Sbjct: 336 LLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNN 369
Score = 128 (50.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L M N + L AF GL N++ L L ++ +I G L GL L E+ LS N +
Sbjct: 244 LKMQRNGVTKLMDGAFW--GLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINR 301
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I ++ + L +L+L N +S+++ +F + L L + +++ +I+ AF G SL
Sbjct: 302 ISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSL 361
Query: 174 ESIKLNGNRLS 184
+++ L N +S
Sbjct: 362 KTLDLRNNEIS 372
Score = 57 (25.1 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 323 LTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+ + + D G + C A+N AG AN TL V
Sbjct: 663 IVDVKIEDIGVYSCTAQNSAGSVSANATLTV 693
Score = 53 (23.7 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L++ ++ SD+G++ C N G N L V
Sbjct: 752 LIIVDSDVSDAGKYTCEMSNTLGTERGNVRLSV 784
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 271 (100.5 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 84/304 (27%), Positives = 145/304 (47%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
+ Q L MS N ++ + +A+ L +L L+ + ++D A GL+ L ++L DN
Sbjct: 287 MLQQLYMSQNAIEKISPDAWEFCQ--RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDN 344
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPIS-KIEKG--AFQFVPGLVKLDMSESRLEHISPEA 166
+T I F+ + L+ L+L N IS IE AF + L KL + +R++ ++ +A
Sbjct: 345 RVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKA 404
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-N 225
F G +SLE + LN N + + L + L+ + +CDC+++ + WL D +
Sbjct: 405 FIGLESLEYLDLNNNAIMSIQENAFSQT-HLKGLVLNTSSLLCDCHLKWLLQWLVDNNFH 463
Query: 226 VPVQPACTGPERLSGKVFSDLHADDFAC----KPEIRMDSRYVEAVSSENATVVCRVDSI 281
V +C PE L+G+ ++ DF C KP+IR A+ N T+ C S
Sbjct: 464 HSVNVSCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTHPESTIALRGVNVTLTCTAVSS 523
Query: 282 PPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGE-YERKSSLVLTNAQESDSGRFYCVAE 339
+ +S W +L + ++ R + + GE E S L L + +D G++ C+
Sbjct: 524 SDSPMSTIWRKDSEILYDVDIENFVR-YRQQDGEALEYTSVLRLFSVNFTDEGKYQCIVT 582
Query: 340 NRAG 343
N G
Sbjct: 583 NHFG 586
Score = 194 (73.4 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 50/171 (29%), Positives = 88/171 (51%)
Query: 35 RDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGA 94
R++ + P+ + Q L++ N ++I+ F+ GL +L+ L + R I ++ GA
Sbjct: 200 RNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQ--GLDSLRSLKMQRNGISKLKDGA 257
Query: 95 LDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154
GL N+ E++L N LT + +R L+ L +++N I KI A++F L +LD+
Sbjct: 258 FFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDL 317
Query: 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
S ++L + AF G LE + L NR++H L L ++L +N
Sbjct: 318 SYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNN 368
Score = 168 (64.2 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L++ NNL + K GL LQ+L++++ I +I A + L E+DLS N LT
Sbjct: 267 LELEHNNLTGVNKGWLY--GLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTR 324
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI---SPEAFTGA 170
+ F + L LNL N ++ I G F+F+ L LD+ + + + EAF+G
Sbjct: 325 LDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGL 384
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
KSL + L GNR+ ++ L L ++L++N
Sbjct: 385 KSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNN 419
Score = 134 (52.2 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 38/132 (28%), Positives = 69/132 (52%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTN-LIEIDLSDNLLT 112
LD+S N + + +F R ++L+ L L+ I +++G D L++ L+ + L+ N ++
Sbjct: 148 LDLSSNIISEIKTSSFPR---MSLKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRIS 204
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
IP F+ + L+ L L RN I +E FQ + L L M + + + AF G +
Sbjct: 205 MIPPKVFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNN 263
Query: 173 LESIKLNGNRLS 184
+E ++L N L+
Sbjct: 264 MEELELEHNNLT 275
Score = 133 (51.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 35/131 (26%), Positives = 72/131 (54%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L M N + L AF GL N+++L L ++ ++ G L GL L ++ +S N +
Sbjct: 243 LKMQRNGISKLKDGAF--FGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEK 300
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I ++ + L +L+L+ N ++++++ AF + L +L++ ++R+ HI+ F +L
Sbjct: 301 ISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNL 360
Query: 174 ESIKLNGNRLS 184
+++ L N +S
Sbjct: 361 QTLDLRNNDIS 371
Score = 121 (47.7 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 42/160 (26%), Positives = 80/160 (50%)
Query: 47 ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
ES+ Q + M+ N L +P + N+ L L I +I++ A + + L +DL
Sbjct: 94 ESQTLQEVKMNYNELTEIP---YFGEPTPNITLLSLVHNLIPEINAEAFELYSALESLDL 150
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP-GLVKLDMSESRLEHISPE 165
S N+++ I + +F + L+ LNL+ N IS +E G F + L+ + ++ +R+ I P+
Sbjct: 151 SSNIISEIKTSSFPRMS-LKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPK 209
Query: 166 AFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
F L+ ++L NR+ + + L L +++ N
Sbjct: 210 VFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRN 248
Score = 63 (27.2 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 272 ATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331
A + C + P ISW +G + + +R+ V+ + + + N + D
Sbjct: 618 ARLECAAEGHPTPQISWQKDGG---TDFPAARERRMHVMPEDDV-----FFIANVKIEDM 669
Query: 332 GRFYCVAENRAGIADANFTLQV 353
G + C+A+N AG AN +L V
Sbjct: 670 GIYSCMAQNIAGGLSANASLTV 691
Score = 47 (21.6 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L++ +A D+G++ C+ N G + L V
Sbjct: 750 LIIVDAGLEDAGKYTCLMSNTLGTERGHIYLNV 782
Score = 45 (20.9 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 17/60 (28%), Positives = 23/60 (38%)
Query: 475 NDTRKPEGLSPEPHNDDVLFQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGELDDN 534
N R E L P +FQ WN N ELG + P+++ + E D N
Sbjct: 973 NHERMTENL-PFSQRSSEIFQRPLWNMN------RELGLLPFSQQPVLESPELT-ERDPN 1024
Score = 38 (18.4 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 392 RMRTITYPNSKNPAQIEVMANGNAHAVVNKTP-SLTPVIETSSFTER 437
RM T P S+ ++I N + + P S PV+E+ TER
Sbjct: 976 RM-TENLPFSQRSSEIFQRPLWNMNRELGLLPFSQQPVLESPELTER 1021
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 274 (101.5 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 72/238 (30%), Positives = 110/238 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L ++P P + T+ LD++GNN+ + K F AGL
Sbjct: 28 CPAQCSCS---GST-VDCHGLALRSVPRNIPRN--TERLDLNGNNITRITKTDF--AGLR 79
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L I I+ GA L L + L+ N L P L F L L+L+ N I
Sbjct: 80 HLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQI 139
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + + + I AF + LE + LN N ++ V S +
Sbjct: 140 QAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMP 199
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + V + C GP L G +++ +F C
Sbjct: 200 KLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 194 (73.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 50/181 (27%), Positives = 89/181 (49%)
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+ ++ L + I I GA L IDLS+N ++ + FQ +R L L L N I+
Sbjct: 304 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 363
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ K F+ + L L ++ +++ + +AF +L + L N+L + PL
Sbjct: 364 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 423
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKVFSDLHADDFA 252
+ + L NP++CDC+++ WLAD + P++ + CT P RL+ K + + F
Sbjct: 424 IQTMHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 479
Query: 253 C 253
C
Sbjct: 480 C 480
Score = 192 (72.6 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 45/155 (29%), Positives = 75/155 (48%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N T +P + + L ++L+ N IS + +F + L+ L +S +RL
Sbjct: 757 DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 815
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I P F G KSL + L+GN +S P + L L + + NP CDCNM+ + W
Sbjct: 816 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSDW 875
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + P C GP ++ K+ + F C+
Sbjct: 876 VKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ 910
Score = 161 (61.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L L +I+ S+N +T I F+ + ++ L N + ++ F+ + L
Sbjct: 553 TGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKT 612
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ + ++F G S+ + L N+++ + + L L + L NP+ C+C
Sbjct: 613 LMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNC 672
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
+ + WL K+ V P C P L D+ DF C
Sbjct: 673 YLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 714
Score = 142 (55.0 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + C +K L +P+ ++T+ L + GN ++PKE + +
Sbjct: 729 CPAECTCL----DTVVRCSNKALKVLPKGIPRDVTE-LYLDGNQFTLVPKEL---SNYKH 780
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L + L+ I + + + +T L+ + LS N L IP TF ++ LR L+L N IS
Sbjct: 781 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 840
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +GAF + L L + + L
Sbjct: 841 VVPEGAFNDLAALSHLAIGANPL 863
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 45/167 (26%), Positives = 82/167 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ G ++C ++ L IP+ P+ T L ++ N +L F++ L
Sbjct: 508 CPEKCRCE---GTT-VDCSNQKLTKIPDHIPQ--YTAELRLNNNEFTVLEATGIFKK--L 559
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+K+ + I I+ GA +G + + EI L+ N L ++ F+ + L+ L L N
Sbjct: 560 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 619
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS + +F + + L + ++++ I+P AF SL ++ L N
Sbjct: 620 ISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLAN 666
Score = 50 (22.7 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G E+ P N+ +R+ Q + V+PP
Sbjct: 290 GKGLTEI-PTNLPETITEIRLEQNSIKVIPP 319
>UNIPROTKB|F1NN41 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=IEA]
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0020037 GO:GO:0031012 GO:GO:0004601
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042744 SUPFAM:SSF48113
GO:GO:0005201 Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325
OMA:EPVITWN EMBL:AADN02002863 EMBL:AADN02002864 IPI:IPI00586612
Ensembl:ENSGALT00000026413 Uniprot:F1NN41
Length = 1416
Score = 276 (102.2 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 78/283 (27%), Positives = 131/283 (46%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I +I G L NL + L++N + IPS F+ + L+ L L +N I I++ AF+ +
Sbjct: 10 IKEIQPGEFRRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGL 69
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L +L + +++E + PE+FT LE + L+ NR++H + L + + L N
Sbjct: 70 ASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNNRIAHLIPGTFSHLESMKRLRLDSNA 129
Query: 207 WVCDCNMRSIKMWLAD-------KKNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIR 258
CDC + +WLA+ N C P R+ G+ + + ++ C +P I
Sbjct: 130 LHCDCEI----LWLAELLKTYVESGNAQAAATCEYPRRIQGRSVATITPEELNCERPRIT 185
Query: 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ + V+ S CR + P I W N N R+ +++ G
Sbjct: 186 SEPQDVDVTSGNTVYFTCRAEGNPKPEIIWLRNN----NELIMKEDSRLNLLDDG----- 236
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
+L++ N QE+D G + C+A+N AG T +VT R G P
Sbjct: 237 -TLMIQNTQETDQGIYQCMAKNVAGEVK---TQEVTLRYFGSP 275
Score = 149 (57.5 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 43/130 (33%), Positives = 68/130 (52%)
Query: 55 DMSGNNL-QILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
D+ N + +I P E FRR L NL L L I +I SGA + L NL + L N + S
Sbjct: 4 DLRFNRIKEIQPGE-FRR--LKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQS 60
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I F+ + L L L N I ++ +F +P L +L + +R+ H+ P F+ +S+
Sbjct: 61 IDRQAFKGLASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNNRIAHLIPGTFSHLESM 120
Query: 174 ESIKLNGNRL 183
+ ++L+ N L
Sbjct: 121 KRLRLDSNAL 130
Score = 116 (45.9 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 105 DLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISP 164
DL N + I F+ ++ L L L N I +I GAF+ + L L + ++ ++ I
Sbjct: 4 DLRFNRIKEIQPGEFRRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDR 63
Query: 165 EAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+AF G SLE + L+ N++ S L KL + LH+N
Sbjct: 64 QAFKGLASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNN 104
Score = 73 (30.8 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 23/90 (25%), Positives = 35/90 (38%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
+P + + E + E+ T+ C P I+W R T S RI + G
Sbjct: 277 RPSFVIHPQNTEVLVGESVTLECSATGHPQPQITWTKGDR-----TPLPSDPRITITPSG 331
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAENRAG 343
L + N ++ DSG + C A N G
Sbjct: 332 ------GLYIQNVKQEDSGEYTCFATNSIG 355
Score = 66 (28.3 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 309 VIEQGEYE--RKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGV---GLPFL 363
V E G++ + L + + +D GR+ CVA N G + + L V V G PF+
Sbjct: 501 VTESGKFHVSPEGYLTIRDVGTADEGRYECVARNTIGYSSVSMVLSVNVPNVSRNGDPFV 560
Score = 46 (21.3 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 542 PIVGQGQNELLPNNIHP 558
P+ G G LL N+++P
Sbjct: 819 PVCGSGMTSLLMNSVYP 835
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 312 QGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFLG 364
QGE E + Q ++SG+F+ E I D + Y V +G
Sbjct: 485 QGEPEPVITWNKDGVQVTESGKFHVSPEGYLTIRDVGTADEGRYECVARNTIG 537
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 269 (99.8 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 84/304 (27%), Positives = 145/304 (47%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
+ Q L +S N ++ + +A+ L +L L+ + ++D A GL+ L ++L DN
Sbjct: 288 MLQQLYVSQNAIERISPDAWEFCQ--RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDN 345
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPIS-KIEKG--AFQFVPGLVKLDMSESRLEHISPEA 166
+T I F+ + L+ L+L N IS IE AF + L KL + ++++ I+ +A
Sbjct: 346 RVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKA 405
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-N 225
F G +SLE + LN N + + L + L+ + +CDC+++ + WL D
Sbjct: 406 FIGLESLEHLDLNNNAIMSIQENAFSQT-HLKELILNTSSLLCDCHLKWLLQWLVDNNFQ 464
Query: 226 VPVQPACTGPERLSGKVFSDLHADDFAC----KPEIRMDSRYVEAVSSENATVVCRVDSI 281
V +C PE L+G+ ++ DF C KP+IR + A+ N T+ C S
Sbjct: 465 HSVNVSCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTHPETIIALRGMNVTLTCTAVSS 524
Query: 282 PPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGE-YERKSSLVLTNAQESDSGRFYCVAE 339
+ +S W +L + ++ R + + GE E S L L N +D G++ C+
Sbjct: 525 SDSPMSTVWRKDSEILYDVDTENFVRYWQ-QAGEALEYTSILHLFNVNFTDEGKYQCIVT 583
Query: 340 NRAG 343
N G
Sbjct: 584 NHFG 587
Score = 188 (71.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 47/154 (30%), Positives = 81/154 (52%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L++ N ++I+ F+ GL +L+ L + R I ++ GA GL N+ E++L N L
Sbjct: 218 QFLELKRNRIKIVEGLTFQ--GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNL 275
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T + +R L+ L +++N I +I A++F L +LD+S ++L + AF G
Sbjct: 276 TRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLS 335
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
LE + L NR++H L L ++L +N
Sbjct: 336 LLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNN 369
Score = 159 (61.0 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 47/155 (30%), Positives = 77/155 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L++ NNL + K GL LQ+L++++ I +I A + L E+DLS N LT
Sbjct: 268 LELEHNNLTRVNKGWLY--GLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTR 325
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI---SPEAFTGA 170
+ F + L LNL N ++ I G F+F+ L LD+ + + + EAF G
Sbjct: 326 LDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGL 385
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
SL + L GN++ ++ L L ++L++N
Sbjct: 386 TSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNN 420
Score = 136 (52.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 35/131 (26%), Positives = 73/131 (55%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L M N + L AF GL N+++L L ++ +++ G L GL L ++ +S N +
Sbjct: 244 LKMQRNGISKLKDGAF--FGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I ++ + L +L+L+ N ++++++ AF + L +L++ ++R+ HI+ F +L
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNL 361
Query: 174 ESIKLNGNRLS 184
+++ L N +S
Sbjct: 362 QTLDLRNNEIS 372
Score = 133 (51.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 38/153 (24%), Positives = 77/153 (50%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
V+ ++ N + ++P + F+ L +LQ L L R I ++ GL +L + + N ++
Sbjct: 196 VVKLNRNRMSMIPPKIFK---LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGIS 252
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + + +L L N ++++ KG + L +L +S++ +E ISP+A+ +
Sbjct: 253 KLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQR 312
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
L + L+ N+L+ + L L + L DN
Sbjct: 313 LSELDLSYNQLTRLDESAFVGLSLLERLNLGDN 345
Score = 130 (50.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTN-LIEIDLSDNLLT 112
LD+S N + + +F R + L+ L L+ I +++G D L++ L+ + L+ N ++
Sbjct: 149 LDLSSNIISEIKTSSFPR---MQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMS 205
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
IP F+ + L+ L L RN I +E FQ + L L M + + + AF G +
Sbjct: 206 MIPPKIFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNN 264
Query: 173 LESIKLNGNRLS 184
+E ++L N L+
Sbjct: 265 MEELELEHNNLT 276
Score = 121 (47.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 42/160 (26%), Positives = 80/160 (50%)
Query: 47 ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
ES+ Q + M+ N L +P + N+ L L I +I++ AL L +DL
Sbjct: 95 ESQTLQEVKMNYNELTEIP---YFGEPTSNITLLSLVHNIIPEINAQALQFYPALESLDL 151
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG-LVKLDMSESRLEHISPE 165
S N+++ I + +F ++ L+ LNL+ N I+ +E G F + L+ + ++ +R+ I P+
Sbjct: 152 SSNIISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPK 210
Query: 166 AFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
F L+ ++L NR+ + + L L +++ N
Sbjct: 211 IFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRN 249
Score = 65 (27.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 272 ATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331
A + C + P ISW +G + + +R+ V+ + + + N + D
Sbjct: 619 ARLECAAEGHPAPQISWQKDGG---TDFPAARERRMHVMPEDDV-----FFIANVKIEDM 670
Query: 332 GRFYCVAENRAGIADANFTLQV 353
G + C+A+N AG AN +L V
Sbjct: 671 GIYSCMAQNTAGGLSANASLTV 692
Score = 49 (22.3 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L++ +A D+G++ C+ N G + L V
Sbjct: 751 LIIVDAGLEDAGKYTCIMSNTLGTERGHIYLNV 783
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 275 (101.9 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 77/283 (27%), Positives = 132/283 (46%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I +I GA L NL + L++N + IPS F+ + L+ L L +N I I++ AF+ +
Sbjct: 74 IREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGL 133
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L +L + +++E + P++F LE + L+ NR++H + L + + L N
Sbjct: 134 ASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLRLDSNT 193
Query: 207 WVCDCNMRSIKMWLAD-------KKNVPVQPACTGPERLSGKVFSDLHADDFAC-KPEIR 258
CDC + +WLAD N C P R+ G+ + + ++ C +P I
Sbjct: 194 LHCDCEI----LWLADLLKTYAESGNAQAAAICEYPRRIQGRSVATITPEELNCERPRIT 249
Query: 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ + + S CR + P I W N N + + R+ +++ G
Sbjct: 250 SEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNN----NELSMKTDSRLNLLDDG----- 300
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
+L++ N QE+D G + C+A+N AG T +VT R G P
Sbjct: 301 -TLMIQNTQETDQGIYQCMAKNVAGEVK---TQEVTLRYFGSP 339
Score = 198 (74.8 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 54/168 (32%), Positives = 85/168 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C+C + + C L +P AP+ T +LD+ N ++ + AFRR L
Sbjct: 36 CPSRCLCF----RTTVRCMHLLLEAVPAVAPQ---TSILDLRFNRIREIQPGAFRR--LR 86
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL L L I +I SGA + L NL + L N + SI F+ + L L L N I
Sbjct: 87 NLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQI 146
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
++ +FQ +P L +L + +R+ H+ P F +S++ ++L+ N L
Sbjct: 147 ETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLRLDSNTL 194
Score = 123 (48.4 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+DL N + I F+ +R L L L N I +I GAF+ + L L + ++ ++ I
Sbjct: 67 LDLRFNRIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSID 126
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+AF G SLE + L+ N++ S + L KL + LH+N
Sbjct: 127 RQAFKGLASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNN 168
Score = 69 (29.3 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 309 VIEQGEYE--RKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGV---GLPFL 363
V E G++ + L + + +D+GR+ CVA N G A + L V V G PF+
Sbjct: 565 VTESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSVNVPDVSRNGDPFV 624
Score = 68 (29.0 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 22/87 (25%), Positives = 33/87 (37%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
+P + + E + E+ T+ C PP ISW R T R+ + G
Sbjct: 341 RPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDR-----TPLPVDPRVNITPSG 395
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAEN 340
L + N + DSG + C A N
Sbjct: 396 ------GLYIQNVVQGDSGEYACSATN 416
Score = 46 (21.3 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 542 PIVGQGQNELLPNNIHP 558
P+ G G LL N+++P
Sbjct: 883 PVCGSGMTSLLMNSVYP 899
Score = 46 (21.3 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 23/88 (26%), Positives = 33/88 (37%)
Query: 267 VSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA 326
+ + C PP I+W G L S +R V+ G R S + L
Sbjct: 445 IEGQTVDFQCEAKGNPPPVIAWTKGGSQL------SVDRRHLVLSSGTL-RISGVAL--- 494
Query: 327 QESDSGRFYCVAENRAGIAD--ANFTLQ 352
D G++ C A N G A+ T+Q
Sbjct: 495 --HDQGQYECQAVNIIGSQKVVAHLTVQ 520
Score = 37 (18.1 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 312 QGEYERKSSLVLTNAQESDSGRFYCVAE-----NRAGIADA 347
QGE E + Q ++SG+F+ E N G ADA
Sbjct: 549 QGEPEPAITWNKDGVQVTESGKFHISPEGFLTINDVGPADA 589
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 260 (96.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 66/202 (32%), Positives = 100/202 (49%)
Query: 50 LTQVLDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
L + LD+S N L+ + FR GL L L L RC + ++ G GL L + L D
Sbjct: 106 LLEQLDLSDNAQLRAVDPATFR--GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 163
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N L ++P F+ + L L L N I + + AF+ + L +L + ++R+ H+ P AF
Sbjct: 164 NGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 223
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV 228
L ++ L N LS ++ PL L + L+DNPWVCDC R + WL +
Sbjct: 224 DLGRLMTLYLFANNLSALSAEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQQFRGSSS 283
Query: 229 QPACTGPERLSGKVFSDLHADD 250
+ C+ P RL+G+ L D
Sbjct: 284 ELPCSLPPRLAGRDLKRLATTD 305
Score = 194 (73.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C + K C + L +P A +Q + + GN + +P +FR N
Sbjct: 27 CPGACVC-YNEPKVTTSCPQQGLQAVP-ADIPAASQRVFLHGNRITYVPAASFRACR--N 82
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNPI 135
L L+L + +ID+ A GL L ++DLSDN L ++ TF+ + L L+L R +
Sbjct: 83 LTILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGL 142
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
++ G F+ + L L + ++ L+ + +AF +L + L+GNR+ P R+ L
Sbjct: 143 QELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLH 202
Query: 196 KLMMIELHDN 205
L + LH N
Sbjct: 203 SLDRLLLHQN 212
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 280 (103.6 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 71/238 (29%), Positives = 110/238 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C ++C L +P P + + LD+ NN+ + K F AGL
Sbjct: 34 CPTKCTCSAAS----VDCHGLGLRAVPRGIPRN--AERLDLDRNNITRITKMDF--AGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+ L L + I+ GA L L + L+ N L +P L FQS L L+L+ N I
Sbjct: 86 NLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ V G+ L + + + I AF + LE + LN N +S V S +
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
K+ + LH N CDC++ + WL ++ + C P L G +D+ ++ C
Sbjct: 206 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYVC 263
Score = 200 (75.5 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 79/314 (25%), Positives = 134/314 (42%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
++D G L +P A G++ ++ L + I I +GA L ID+S N ++
Sbjct: 290 IVDCRGKGLTEIP--ANLPEGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQIS 344
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
I FQ ++ L L L N I++I KG F + L L ++ +++ + F ++
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADK-KNVPVQPA 231
L + L N+L PL + + L NP+VCDC+++ WLAD ++ P++ +
Sbjct: 405 LNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLK----WLADYLQDNPIETS 460
Query: 232 ---CTGPERLSGKVFSDLHADDFACK----------PEIRMDSRYVEAVSSENATVVCRV 278
C+ P RL+ K S + + F C E MD E E V C
Sbjct: 461 GARCSSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSN 520
Query: 279 DSIP--PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYC 336
+ P+ + Y L LN+ S + + ++ RK +L +E G F
Sbjct: 521 QKLARIPSHLPEYTTD-LRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAF-- 577
Query: 337 VAENRAGIADANFT 350
+ AG+ + T
Sbjct: 578 --DGAAGVQELMLT 589
Score = 185 (70.2 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 47/155 (30%), Positives = 74/155 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P + R L ++L+ N IS + F + L L +S +RL
Sbjct: 753 DVTELYLEGNHLTAVPK-ELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRL 811
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ P C+ PE ++ ++ F CK
Sbjct: 872 VKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCK 906
Score = 168 (64.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L NL +I+LS+N + + F +++L L N + + F+ + L
Sbjct: 550 TGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKT 609
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + + + +S + F G S+ + L NR++ + L+ L I L NP+ C+C
Sbjct: 610 LMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNC 669
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
+M + WL ++ V P C P L D+ DF C
Sbjct: 670 HMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 711
Score = 165 (63.1 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 66/262 (25%), Positives = 116/262 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C ++CR K L IP PE + ++ + N+++ +P AF +
Sbjct: 280 CPSACSCS----NNIVDCRGKGLTEIPANLPEG-IVEIR-LEQNSIKSIPAGAFTQ--YK 331
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+++ +++ I I A GL +L + L N +T IP F + L+ L L N I
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 391
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + FQ + L L + +++L+ IS F +S++++ L N P + L
Sbjct: 392 NCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQN-----PF-VCDCHL 445
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGKVFSDLHADDFA 252
K + L DNP S LA+K+ ++ C+G E + S+ D
Sbjct: 446 KWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMD-LV 504
Query: 253 CKPEIRMDSRYVEAVSSENATV 274
C + R + V+ + + A +
Sbjct: 505 CPEKCRCEGTIVDCSNQKLARI 526
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/167 (29%), Positives = 84/167 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ G ++C ++ L IP PE T L ++ N++ +L F++ L
Sbjct: 505 CPEKCRCE---GTI-VDCSNQKLARIPSHLPE--YTTDLRLNDNDISVLEATGIFKK--L 556
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
NL+K+ L+ I ++ GA DG + E+ L+ N L ++ F+ + L+ L L N
Sbjct: 557 PNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNL 616
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS + F + + L + ++R+ I+P AFT SL +I L N
Sbjct: 617 ISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 42/145 (28%), Positives = 71/145 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE--AFRRAGL 74
CP C C + + C ++ L +P+ ++T+ L + GN+L +PKE AFR+ L
Sbjct: 725 CPEQCTCV----ETVVRCSNRGLHALPKGMPKDVTE-LYLEGNHLTAVPKELSAFRQLTL 779
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
++L + I + + +++L + LS N L IP F +R LR L L N
Sbjct: 780 IDL-----SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGND 834
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRL 159
IS + +G+F + L L + + L
Sbjct: 835 ISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 37 (18.1 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 474 INDTRKPEGLSPEPHND 490
+ D +K E + P PH++
Sbjct: 253 VADVQKKEYVCPGPHSE 269
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 276 (102.2 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 73/238 (30%), Positives = 111/238 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C G ++C ++P P++ T+ LD++ NNL + K+ F AGL
Sbjct: 31 CPPHCSCT---GST-VDCHGLAFKSVPRNIPKT--TERLDLNANNLTHIGKDDF--AGLK 82
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L I ID GA L L + L+ N L +P L F L L+L+ N I
Sbjct: 83 HLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNI 142
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + ++ + I AF + LE + LN N +S P+ S +
Sbjct: 143 QMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNNISAIPISSFNHMP 202
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC + + WL + + + C+ P L G ++L DF C
Sbjct: 203 KLRTFRLHWNSLRCDCQLSWLSQWLRQRPALGLYTQCSSPAHLHGLNLAELQKKDFTC 260
Score = 196 (74.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 52/205 (25%), Positives = 95/205 (46%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
++D G L +P ++ ++ L + I + GA L IDLS+N ++
Sbjct: 288 IVDCRGKGLTAIPANMPE-----SMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQIS 342
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
I F +R L L L N I+ + +G F + L L ++ +++ + F ++
Sbjct: 343 EIAPDAFHGLRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLEN 402
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPVQPA 231
L + L N++ + PL + + L NP+VCDC ++ WLAD ++ P++ +
Sbjct: 403 LSLLSLYDNKIQTLAKGTFAPLKSIQTLHLAQNPFVCDCGLK----WLADFLRSNPIETS 458
Query: 232 ---CTGPERLSGKVFSDLHADDFAC 253
C+ P RL+ K S + + F C
Sbjct: 459 GARCSSPRRLANKRISQIKSKKFRC 483
Score = 187 (70.9 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/191 (25%), Positives = 87/191 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G LT+L +I+LS+N +T I F+ + +L+L N + + G F+ + GL
Sbjct: 555 TGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRM 614
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + + + + +F+G +++ + L N+LS + + L L + L NP+ CDC
Sbjct: 615 LMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLANPFSCDC 674
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSEN 271
+ + WL ++ V P C P L D+ DF C ++ V +
Sbjct: 675 RLSWLGEWLRSRQIVTGNPRCQNPAFLREIPLQDVAKPDFICDKDVLEQD--VSCIPKPQ 732
Query: 272 ATVVCR-VDSI 281
C VDS+
Sbjct: 733 CPEQCTCVDSV 743
Score = 183 (69.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 45/154 (29%), Positives = 70/154 (45%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N+ SIP + R L+ L+L+ N IS + +F + L L +S + L
Sbjct: 761 NVTELYLDGNVFVSIPQ-ELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNAL 819
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I P F G SL + L+GN +S + L + + NP CDC +R + W
Sbjct: 820 RCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGANPLYCDCRLRWLSDW 879
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
+ P C GP+ + GK+ + F C
Sbjct: 880 VKSGYKEPGIARCAGPQGMEGKLLLTTPGNTFQC 913
Score = 166 (63.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/168 (28%), Positives = 83/168 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C+ ++C + L PE T+ L ++ N+L IL R L +
Sbjct: 510 CPPKCRCE----ATVVDCSNLRLTKFPEHLPLSTTE-LRLNNNDLSILEATGLFRP-LTH 563
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+K+ L+ I +I+ GA +G ++++E+ L+ NLL S+ F+ + LR L L N I
Sbjct: 564 LKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIR 623
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLS 184
+ +F + + L + +++L I P AF +L ++ L N S
Sbjct: 624 CVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLANPFS 671
Score = 148 (57.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C ++CR K L IP PES +T++ + N ++ +P AF +
Sbjct: 278 CPPMCSCT----NNIVDCRGKGLTAIPANMPES-MTEIR-LEQNGIKSVPPGAF--SSYK 329
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+++ L+ I +I A GL +L + L N +T +P F + L L L N I
Sbjct: 330 RLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNANKI 389
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
+ FQ + L L + +++++ ++ F KS++++ L N
Sbjct: 390 HCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLKSIQTLHLAQN 435
Score = 41 (19.5 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G + P N+ + +R+ Q G+ +PP
Sbjct: 293 GKGLTAI-PANMPESMTEIRLEQNGIKSVPP 322
Score = 38 (18.4 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 278 VDSIPPAAISWYWNGRLL-LNNTAFS 302
+ S+PP A S Y R + L+N S
Sbjct: 317 IKSVPPGAFSSYKRLRRIDLSNNQIS 342
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 258 (95.9 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 65/202 (32%), Positives = 99/202 (49%)
Query: 50 LTQVLDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
L + LD+S N L ++ F GL +L L L RC + ++ G GL L + L D
Sbjct: 106 LLEQLDLSDNAQLHVVDPTTFH--GLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQD 163
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N L ++P TF+ + L L L N I + + AF+ + L +L + ++ + + P AF
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV 228
L ++ L N LS P + PL L + L+DNPWVCDC R + WL +
Sbjct: 224 DLGRLMTLYLFANNLSMLPAEVLMPLRSLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSS 283
Query: 229 QPACTGPERLSGKVFSDLHADD 250
+ C P+RL+ + L A D
Sbjct: 284 EVPCNLPQRLADRDLKRLAASD 305
Score = 186 (70.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 55/191 (28%), Positives = 91/191 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C+C + K C + L +P P S +Q + + GN + +P +F+
Sbjct: 27 CPGACVC-YNEPKVTTSCPQQGLQAVPTGIPAS--SQRIFLHGNRISHVPAASFQSCR-- 81
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNP 134
NL L+L + +ID+ A GLT L ++DLSDN L + TF + L L+L R
Sbjct: 82 NLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCG 141
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+ ++ G F+ + L L + ++ L+ + F +L + L+GNR+ P + L
Sbjct: 142 LRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGL 201
Query: 195 LKLMMIELHDN 205
L + LH N
Sbjct: 202 HSLDRLLLHQN 212
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 266 (98.7 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 71/238 (29%), Positives = 110/238 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C G ++C L +P P + T+ LD++GNN+ + K F AGL
Sbjct: 24 CPAQCSCS---GST-VDCHGLALRGVPRNIPRN--TERLDLNGNNITRITKTDF--AGLR 75
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L I I+ GA L L + L+ N L + L F L L+L+ N I
Sbjct: 76 HLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQI 135
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + L + +++ I AF + LE + LN N ++ V S +
Sbjct: 136 QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMP 195
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
KL LH N CDC++ + WL + V + C GP L G +++ +F C
Sbjct: 196 KLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPAHLRGHNVAEVQKREFVC 253
Score = 198 (74.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 51/181 (28%), Positives = 89/181 (49%)
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+ ++ L + I I GA L IDLS+N ++ FQ +R L L L N I+
Sbjct: 298 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 357
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ KG F+ + L L ++ +++ + +AF +L + L N+L + PL
Sbjct: 358 ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 417
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKVFSDLHADDFA 252
+ + L NP++CDC+++ WLAD + P++ + CT P RL+ K + + F
Sbjct: 418 IQTLHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 473
Query: 253 C 253
C
Sbjct: 474 C 474
Score = 183 (69.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 44/155 (28%), Positives = 74/155 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N T +P + + L ++L+ N IS + +F + L+ L +S +RL
Sbjct: 751 DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 809
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I F G KSL + L+GN +S P + L L + + NP CDCNM+ + W
Sbjct: 810 RCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDW 869
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + P C GP ++ K+ + F C+
Sbjct: 870 VKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQ 904
Score = 171 (65.3 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 43/162 (26%), Positives = 74/162 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L L +I+LS+N +T I F + +L L N + + F+ + L
Sbjct: 547 TGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKT 606
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ + ++FTG S+ + L N+++ S + L L + L NP+ C+C
Sbjct: 607 LMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNC 666
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
++ + WL K+ V P C P L D+ DF C
Sbjct: 667 HLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 708
Score = 144 (55.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + C +K L +P+ ++T+ L + GN ++PKE + +
Sbjct: 723 CPAECTCL----DTVVRCSNKGLKALPKGIPKDVTE-LYLDGNQFTLVPKEL---SNYKH 774
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L + L+ I + + + +T L+ + LS N L IP+ TF ++ LR L+L N IS
Sbjct: 775 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDIS 834
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +GAF + L L + + L
Sbjct: 835 VVPEGAFNDLSALSHLAIGANPL 857
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/167 (25%), Positives = 83/167 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ G ++C ++ L IP+ P+ T L ++ N +L F++ L
Sbjct: 502 CPEKCRCE---GTT-VDCSNQKLNKIPDHIPQ--YTAELRLNNNEFSVLEATGIFKK--L 553
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+K+ L+ I I+ GA DG + + E+ L+ N L ++ F+ + L+ L L N
Sbjct: 554 PQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNR 613
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
+S + +F + + L + ++++ ++P +F SL ++ L N
Sbjct: 614 VSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLAN 660
Score = 50 (22.7 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G E+ P N+ +R+ Q + V+PP
Sbjct: 284 GKGLTEI-PTNLPETITEIRLEQNSIKVIPP 313
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 256 (95.2 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 66/202 (32%), Positives = 99/202 (49%)
Query: 50 LTQVLDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
L + LD+S N L+ + FR GL L L L RC + ++ G GL L + L D
Sbjct: 106 LLEQLDLSDNAQLRAVDPATFR--GLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQD 163
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N L ++P F + L L L N I + + AF+ + L +L + ++R+ + P AF
Sbjct: 164 NGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNRVARVHPHAFR 223
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV 228
L ++ L N LS ++ PL L + L+DNPWVCDC R + WL +
Sbjct: 224 DLGRLMTLYLFANNLSALSAEALAPLRSLQYLRLNDNPWVCDCRARPLWAWLQQFRGSSS 283
Query: 229 QPACTGPERLSGKVFSDLHADD 250
+ C+ P RL+G+ L A D
Sbjct: 284 ELPCSLPARLAGRDLKRLAATD 305
Score = 193 (73.0 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 55/190 (28%), Positives = 93/190 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C + K C + L +P A +Q + + GN + +P +FR N
Sbjct: 27 CPGACVC-YSEPKVTTSCPQQGLQAVP-ADIPAASQRVFLHGNRIAYVPAASFRACR--N 82
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNPI 135
L L+L + ID+ A GL L ++DLSDN L ++ TF+ + L L+L R +
Sbjct: 83 LTILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGL 142
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
++ G F+ + L L + ++ L+ + +AF+ +L + L+GN + P R+ L
Sbjct: 143 RELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLH 202
Query: 196 KLMMIELHDN 205
L + LH N
Sbjct: 203 SLDRLLLHQN 212
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 277 (102.6 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 70/238 (29%), Positives = 109/238 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C ++C L +P P + + LD+ NN+ + K F GL
Sbjct: 34 CPTKCTCSAAS----VDCHGLGLRAVPRGIPRN--AERLDLDRNNITRITKMDF--TGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+ L L + I+ GA L L + L+ N L +P L FQS L L+L+ N I
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ V G+ L + + + I AF + LE + LN N +S V S +
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
K+ + LH N CDC++ + WL ++ + C P L G +D+ ++ C
Sbjct: 206 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYVC 263
Score = 198 (74.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 57/205 (27%), Positives = 99/205 (48%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
++D G L +P A G++ ++ L + I I +GA L ID+S N ++
Sbjct: 290 IVDCRGKGLTEIP--ANLPEGIVEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQIS 344
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
I FQ ++ L L L N I++I KG F + L L ++ +++ + F ++
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADK-KNVPVQPA 231
L + L N+L PL + + L NP+VCDC+++ WLAD ++ P++ +
Sbjct: 405 LNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLK----WLADYLQDNPIETS 460
Query: 232 ---CTGPERLSGKVFSDLHADDFAC 253
C+ P RL+ K S + + F C
Sbjct: 461 GARCSSPRRLANKRISQIKSKKFRC 485
Score = 184 (69.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 47/155 (30%), Positives = 74/155 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P + R L ++L+ N IS + F + L L +S +RL
Sbjct: 753 DVTELYLEGNHLTAVPK-ELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRL 811
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEW 871
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ P C+ PE ++ ++ F CK
Sbjct: 872 IKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCK 906
Score = 174 (66.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 53/215 (24%), Positives = 91/215 (42%)
Query: 40 ITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+ PE E T ++D S L +P L L +A +G L
Sbjct: 503 LVCPEKCRCEGT-IVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEA----TGIFKKLP 557
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
NL +I+LS+N + + F +++L L N + + F+ + GL L + + +
Sbjct: 558 NLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLI 617
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
++ + F G S+ + L NR++ + L+ L I L NP+ C+C+M + W
Sbjct: 618 SCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRW 677
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
L ++ V P C P L D+ DF C+
Sbjct: 678 LRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCE 712
Score = 136 (52.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/138 (29%), Positives = 68/138 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE--AFRRAGL 74
CP C C + + C ++ L T+P+ ++T+ L + GN+L +PKE FR+ L
Sbjct: 725 CPEQCTCV----ETVVRCSNRGLHTLPKGMPKDVTE-LYLEGNHLTAVPKELSTFRQLTL 779
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
++L + I + + +++L + LS N L IP F +R LR L L N
Sbjct: 780 IDL-----SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGND 834
Query: 135 ISKIEKGAFQFVPGLVKL 152
IS + +G+F + L L
Sbjct: 835 ISSVPEGSFNDLTSLSHL 852
Score = 37 (18.1 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 474 INDTRKPEGLSPEPHND 490
+ D +K E + P PH++
Sbjct: 253 VADVQKKEYVCPGPHSE 269
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 277 (102.6 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 70/238 (29%), Positives = 109/238 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C ++C L +P P + + LD+ NN+ + K F GL
Sbjct: 34 CPTKCTCSAAS----VDCHGLGLRAVPRGIPRN--AERLDLDRNNITRITKMDF--TGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+ L L + I+ GA L L + L+ N L +P L FQS L L+L+ N I
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ V G+ L + + + I AF + LE + LN N +S V S +
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
K+ + LH N CDC++ + WL ++ + C P L G +D+ ++ C
Sbjct: 206 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYVC 263
Score = 198 (74.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 57/205 (27%), Positives = 99/205 (48%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
++D G L +P A G++ ++ L + I I +GA L ID+S N ++
Sbjct: 290 IVDCRGKGLTEIP--ANLPEGIVEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQIS 344
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
I FQ ++ L L L N I++I KG F + L L ++ +++ + F ++
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADK-KNVPVQPA 231
L + L N+L PL + + L NP+VCDC+++ WLAD ++ P++ +
Sbjct: 405 LNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLK----WLADYLQDNPIETS 460
Query: 232 ---CTGPERLSGKVFSDLHADDFAC 253
C+ P RL+ K S + + F C
Sbjct: 461 GARCSSPRRLANKRISQIKSKKFRC 485
Score = 184 (69.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 47/155 (30%), Positives = 74/155 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P + R L ++L+ N IS + F + L L +S +RL
Sbjct: 753 DVTELYLEGNHLTAVPK-ELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRL 811
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEW 871
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ P C+ PE ++ ++ F CK
Sbjct: 872 IKAGYKEPGIARCSSPESMADRLLLTTPTHRFQCK 906
Score = 174 (66.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 53/215 (24%), Positives = 91/215 (42%)
Query: 40 ITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+ PE E T ++D S L +P L L +A +G L
Sbjct: 503 LVCPEKCRCEGT-IVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEA----TGIFKKLP 557
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
NL +I+LS+N + + F +++L L N + + F+ + GL L + + +
Sbjct: 558 NLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLI 617
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
++ + F G S+ + L NR++ + L+ L I L NP+ C+C+M + W
Sbjct: 618 SCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRW 677
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
L ++ V P C P L D+ DF C+
Sbjct: 678 LRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCE 712
Score = 136 (52.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/138 (29%), Positives = 68/138 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE--AFRRAGL 74
CP C C + + C ++ L T+P+ ++T+ L + GN+L +PKE FR+ L
Sbjct: 725 CPEQCTCV----ETVVRCSNRGLHTLPKGMPKDVTE-LYLEGNHLTAVPKELSTFRQLTL 779
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
++L + I + + +++L + LS N L IP F +R LR L L N
Sbjct: 780 IDL-----SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGND 834
Query: 135 ISKIEKGAFQFVPGLVKL 152
IS + +G+F + L L
Sbjct: 835 ISSVPEGSFNDLTSLSHL 852
Score = 37 (18.1 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 474 INDTRKPEGLSPEPHND 490
+ D +K E + P PH++
Sbjct: 253 VADVQKKEYVCPGPHSE 269
>UNIPROTKB|E1C0J7 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 EMBL:AADN02019209
IPI:IPI00576786 ProteinModelPortal:E1C0J7
Ensembl:ENSGALT00000009463 Uniprot:E1C0J7
Length = 1411
Score = 274 (101.5 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 82/284 (28%), Positives = 132/284 (46%)
Query: 86 HIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQF 145
HI +I GA L NL + L++N + I +F+ + L+ L L +N I I++ AF
Sbjct: 61 HIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHG 120
Query: 146 VPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L +L + + LE + PE F+ LE + L+ N++S + L L + L N
Sbjct: 121 LRSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSN 180
Query: 206 PWVCDCNMRSIKMWLAD--KKNVP---VQPA--CTGPERLSGKVFSDLHADDFAC-KPEI 257
+CDC++ +WLA+ +K +Q A C P L G+ L A +F C +P I
Sbjct: 181 ALLCDCDL----LWLAELLQKYAELGSIQTAATCEAPRELHGRSIVTLTAQEFNCERPRI 236
Query: 258 RMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYER 317
+ V+ + CR + P AI W N N R+ +++ G
Sbjct: 237 TSEPHDVDVLLGNTVYFTCRAEGNPKPAIIWLHNN----NEIDMKDDNRLNLLQDG---- 288
Query: 318 KSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
+L++ N +ESD G + C+A+N AG T +V R G P
Sbjct: 289 --TLMIQNTKESDKGVYQCMAKNIAGEVK---TQEVVLRYFGTP 327
Score = 180 (68.4 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 51/167 (30%), Positives = 80/167 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C + + C L TIP+ P T +LD+ N+++ + AFRR L N
Sbjct: 24 CPPRCLCF----RTTVRCMHLMLETIPDIPPQ--TSILDLRFNHIREIQPGAFRR--LKN 75
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L I I + + L NL + L N + SI F +R L L L N +
Sbjct: 76 LNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLE 135
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
+E F +P L +L + +++ I P F+ +SL+ ++L+ N L
Sbjct: 136 TLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
Score = 68 (29.0 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 22/98 (22%), Positives = 39/98 (39%)
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYE--RKSSL 321
V A + ++ + C P I+W G I + E G++ + +L
Sbjct: 523 VVAETGQDVAITCAAQGDPRPTITWVKEG--------------IQITESGKFHVSQDGTL 568
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVG 359
+ + +D GR+ C+A N G + L +T VG
Sbjct: 569 SIQDLGVADQGRYECIARNPFGFTSSAMQLTITATDVG 606
Score = 65 (27.9 bits), Expect = 8.7e-11, Sum P(3) = 8.7e-11
Identities = 24/94 (25%), Positives = 34/94 (36%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
KP + + E + E+ T+ C V P ISW L + R + G
Sbjct: 329 KPTFVIQPQNTEVLVGESVTLECGVSGHPHPRISW-----TLGTGSPLPQDPRFAITSSG 383
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAENRAGIADA 347
L + N SD G++ C A N G A
Sbjct: 384 ------GLFIQNVTFSDQGQYNCNASNTEGSIQA 411
Score = 43 (20.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 27/121 (22%), Positives = 49/121 (40%)
Query: 460 KTLH--SVINISNPDLINDTRKPEGLSPEPHNDDVLFQNN-YWNQNIR-QPTNSELGFDS 515
+ LH S++ ++ + + +P ++ EPH+ DVL N Y+ P + + +
Sbjct: 214 RELHGRSIVTLTAQEF--NCERPR-ITSEPHDVDVLLGNTVYFTCRAEGNPKPAIIWLHN 270
Query: 516 NDKTPIIDGVSIGGELDDNYPPDYGLPIVGQGQNELLPNNIHPNAKTLRVWQR--GVPVL 573
N++ + D + L D +G + + NI KT V R G P
Sbjct: 271 NNEIDMKDDNRLN-LLQDGTLMIQNTKESDKGVYQCMAKNIAGEVKTQEVVLRYFGTPSK 329
Query: 574 P 574
P
Sbjct: 330 P 330
Score = 42 (19.8 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 276 CRVDSIPPAAISWYW--------NGRLLLNNTAFSSYQRIFVIEQGEYE 316
C + PP I+W N R + +T R+ + +QG+YE
Sbjct: 442 CTAEGHPPPVIAWTRAAGGPLPSNRRHSILSTGTLRVMRVALHDQGQYE 490
Score = 39 (18.8 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 542 PIVGQGQNELLPNNIH 557
P+ G G LL N+++
Sbjct: 871 PVCGSGMTSLLMNSVY 886
>UNIPROTKB|E1C0J1 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 OMA:GGRYECQ
EMBL:AADN02019209 IPI:IPI00599639 ProteinModelPortal:E1C0J1
Ensembl:ENSGALT00000009466 Uniprot:E1C0J1
Length = 1424
Score = 274 (101.5 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 82/284 (28%), Positives = 132/284 (46%)
Query: 86 HIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQF 145
HI +I GA L NL + L++N + I +F+ + L+ L L +N I I++ AF
Sbjct: 61 HIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHG 120
Query: 146 VPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L +L + + LE + PE F+ LE + L+ N++S + L L + L N
Sbjct: 121 LRSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSN 180
Query: 206 PWVCDCNMRSIKMWLAD--KKNVP---VQPA--CTGPERLSGKVFSDLHADDFAC-KPEI 257
+CDC++ +WLA+ +K +Q A C P L G+ L A +F C +P I
Sbjct: 181 ALLCDCDL----LWLAELLQKYAELGSIQTAATCEAPRELHGRSIVTLTAQEFNCERPRI 236
Query: 258 RMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYER 317
+ V+ + CR + P AI W N N R+ +++ G
Sbjct: 237 TSEPHDVDVLLGNTVYFTCRAEGNPKPAIIWLHNN----NEIDMKDDNRLNLLQDG---- 288
Query: 318 KSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
+L++ N +ESD G + C+A+N AG T +V R G P
Sbjct: 289 --TLMIQNTKESDKGVYQCMAKNIAGEVK---TQEVVLRYFGTP 327
Score = 180 (68.4 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 51/167 (30%), Positives = 80/167 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C + + C L TIP+ P T +LD+ N+++ + AFRR L N
Sbjct: 24 CPPRCLCF----RTTVRCMHLMLETIPDIPPQ--TSILDLRFNHIREIQPGAFRR--LKN 75
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L I I + + L NL + L N + SI F +R L L L N +
Sbjct: 76 LNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLE 135
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
+E F +P L +L + +++ I P F+ +SL+ ++L+ N L
Sbjct: 136 TLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
Score = 68 (29.0 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 22/98 (22%), Positives = 39/98 (39%)
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYE--RKSSL 321
V A + ++ + C P I+W G I + E G++ + +L
Sbjct: 523 VVAETGQDVAITCAAQGDPRPTITWVKEG--------------IQITESGKFHVSQDGTL 568
Query: 322 VLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVG 359
+ + +D GR+ C+A N G + L +T VG
Sbjct: 569 SIQDLGVADQGRYECIARNPFGFTSSAMQLTITATDVG 606
Score = 65 (27.9 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 24/94 (25%), Positives = 34/94 (36%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
KP + + E + E+ T+ C V P ISW L + R + G
Sbjct: 329 KPTFVIQPQNTEVLVGESVTLECGVSGHPHPRISW-----TLGTGSPLPQDPRFAITSSG 383
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAENRAGIADA 347
L + N SD G++ C A N G A
Sbjct: 384 ------GLFIQNVTFSDQGQYNCNASNTEGSIQA 411
Score = 43 (20.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 27/121 (22%), Positives = 49/121 (40%)
Query: 460 KTLH--SVINISNPDLINDTRKPEGLSPEPHNDDVLFQNN-YWNQNIR-QPTNSELGFDS 515
+ LH S++ ++ + + +P ++ EPH+ DVL N Y+ P + + +
Sbjct: 214 RELHGRSIVTLTAQEF--NCERPR-ITSEPHDVDVLLGNTVYFTCRAEGNPKPAIIWLHN 270
Query: 516 NDKTPIIDGVSIGGELDDNYPPDYGLPIVGQGQNELLPNNIHPNAKTLRVWQR--GVPVL 573
N++ + D + L D +G + + NI KT V R G P
Sbjct: 271 NNEIDMKDDNRLN-LLQDGTLMIQNTKESDKGVYQCMAKNIAGEVKTQEVVLRYFGTPSK 329
Query: 574 P 574
P
Sbjct: 330 P 330
Score = 42 (19.8 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 276 CRVDSIPPAAISWYW--------NGRLLLNNTAFSSYQRIFVIEQGEYE 316
C + PP I+W N R + +T R+ + +QG+YE
Sbjct: 442 CTAEGHPPPVIAWTRAAGGPLPSNRRHSILSTGTLRVMRVALHDQGQYE 490
Score = 39 (18.8 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 542 PIVGQGQNELLPNNIH 557
P+ G G LL N+++
Sbjct: 871 PVCGSGMTSLLMNSVY 886
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 264 (98.0 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 66/238 (27%), Positives = 116/238 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C G ++C + L ++P +++ + L++ GNNL ++ + F+R L
Sbjct: 73 CPRVCSCT---GLN-VDCSHRGLTSVPRKISADVER-LELQGNNLTVIYETDFQR--LTK 125
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP-SLTFQSVRFLRDLNLARNPI 135
L+ L L I I+ + L +L + L++N L +IP + S LR L+++ N I
Sbjct: 126 LRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLR-LDISNNVI 184
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + + F+ L L + +++ + AF G LE + LN N L+ P L
Sbjct: 185 TTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLG 244
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
+L + L DNP+ CDC++ + +L + C P +L G+ +DLH +F C
Sbjct: 245 RLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLHDQEFKC 302
Score = 180 (68.4 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 45/158 (28%), Positives = 73/158 (46%)
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI 162
E+ L N + I + +R L L+L+ N I+ + F + L L +S ++L+ +
Sbjct: 770 ELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCL 829
Query: 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD 222
A +G +L + L+GNR+S P S E L L I L NP CDC ++ W+
Sbjct: 830 QRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKWFSDWIKL 889
Query: 223 KKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMD 260
P C PE++ K+ + F C+ +R D
Sbjct: 890 DYVEPGIARCAEPEQMKDKLILSTPSSSFVCRGRVRND 927
Score = 175 (66.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/212 (27%), Positives = 96/212 (45%)
Query: 79 KLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKI 138
+L L + I ++ + L IDLS+N ++ I ++ L L L N I +
Sbjct: 350 ELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDL 409
Query: 139 EKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLM 198
G F+ + L L ++ + + I +AF SL + L N + + + + +
Sbjct: 410 PSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIK 469
Query: 199 MIELHDNPWVCDCNMRSIKMWLAD--KKNVPVQPA---CTGPERLSGKVFSDLHADDFAC 253
+ L NP++CDCN+R WLAD KN P++ + C P+R+ + L + F C
Sbjct: 470 TVHLAKNPFICDCNLR----WLADYLHKN-PIETSGARCESPKRMHRRRIESLREEKFKC 524
Query: 254 K-PEIRMDSRYVEAVSSENATVVCRVDSIPPA 284
E+RM +S E CR+DS PA
Sbjct: 525 SWDELRMK------LSGE-----CRMDSDCPA 545
Score = 169 (64.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/155 (29%), Positives = 73/155 (47%)
Query: 103 EIDLSDNLLTSIPSL-TFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
E+ L+DN L I S F + L L L RN ++ IE AF+ + +L + E++++
Sbjct: 574 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 633
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLA 221
IS + F G L+++ L N++S S E L L + L NP+ C+C++ WL
Sbjct: 634 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLR 693
Query: 222 DKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE 256
K C P ++ DL +F C E
Sbjct: 694 KKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSE 728
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/165 (28%), Positives = 84/165 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C G ++CR+K L ++P + T+ L + N + LP ++F +
Sbjct: 319 CPHPCRCA--DG--IVDCREKSLTSVPVTLPDDTTE-LRLEQNFITELPPKSF--SSFRR 371
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+++ L+ +I +I AL GL L + L N + +PS F+ + L+ L L N IS
Sbjct: 372 LRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEIS 431
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
I K AF+ + L L + ++ ++ ++ F KS++++ L N
Sbjct: 432 CIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKN 476
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 258 (95.9 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 90/316 (28%), Positives = 142/316 (44%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 197 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 254
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPIS IE + L ++ +
Sbjct: 255 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 313
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + + L + L NP CDC +
Sbjct: 314 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLW 373
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 374 VFRRRWRLNFNRQ--QPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVD 431
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L++ S R+ V G E + AQ
Sbjct: 432 EGHTVQFVCRADGDPPPAILWLSPRKHLVSA---KSNGRLTVFPDGTLE------VRYAQ 482
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 483 VQDNGTYLCIAANAGG 498
Score = 188 (71.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 55/190 (28%), Positives = 95/190 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + + C K + +PE +E T++LD+ N ++ L ++ F A +
Sbjct: 36 CPPRCECSAQD--RAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--ASFPH 90
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L + ++ GA + L NL + L N L IP F + L L+++ N I
Sbjct: 91 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 150
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 151 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 210
Query: 197 LMMIEL-HDN 205
L+++ L H N
Sbjct: 211 LIVLRLRHLN 220
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 39/155 (25%), Positives = 73/155 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N + + AF L NL+ L L + I G GL+NL ++D+S+N +
Sbjct: 94 LELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 151
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + L+ L + N + I AF + L +L + + L I EA + L
Sbjct: 152 LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGL 211
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
++L ++ S + L +L ++E+ P++
Sbjct: 212 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 246
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 258 (95.9 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 90/316 (28%), Positives = 142/316 (44%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 203 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 260
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPIS IE + L ++ +
Sbjct: 261 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 319
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + + L + L NP CDC +
Sbjct: 320 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLW 379
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 380 VFRRRWRLNFNRQ--QPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVD 437
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L++ S R+ V G E + AQ
Sbjct: 438 EGHTVQFVCRADGDPPPAILWLSPRKHLVSA---KSNGRLTVFPDGTLE------VRYAQ 488
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 489 VQDNGTYLCIAANAGG 504
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 55/190 (28%), Positives = 95/190 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + + C K + +PE +E T++LD+ N ++ L ++ F A +
Sbjct: 42 CPPRCECSAQD--RAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--ASFPH 96
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L + ++ GA + L NL + L N L IP F + L L+++ N I
Sbjct: 97 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 156
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 157 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 216
Query: 197 LMMIEL-HDN 205
L+++ L H N
Sbjct: 217 LIVLRLRHLN 226
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 39/155 (25%), Positives = 73/155 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N + + AF L NL+ L L + I G GL+NL ++D+S+N +
Sbjct: 100 LELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 157
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + L+ L + N + I AF + L +L + + L I EA + L
Sbjct: 158 LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGL 217
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
++L ++ S + L +L ++E+ P++
Sbjct: 218 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 252
>UNIPROTKB|F1PKU2 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EFRYNDL
EMBL:AAEX03015771 EMBL:AAEX03015772 EMBL:AAEX03015773
Ensembl:ENSCAFT00000010829 Uniprot:F1PKU2
Length = 1429
Score = 267 (99.0 bits), Expect = 8.0e-19, Sum P(2) = 8.0e-19
Identities = 77/265 (29%), Positives = 121/265 (45%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I +I A L L + L++N + I F+ + L L L +N I ++K F+ +
Sbjct: 23 IREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGL 82
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L +L + +++E + PE F LE + L+ N+LS P S L L + L N
Sbjct: 83 ISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNA 142
Query: 207 WVCDCNMRSIKMWLAD-----KKNVPVQPA--CTGPERLSGKVFSDLHADDFACK-PEIR 258
VCDC++ MWL + +N +Q A C P RL G+ + L ++F C+ P I
Sbjct: 143 LVCDCDL----MWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRIT 198
Query: 259 MDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ + VE S CR + P I W N L R+ + + G
Sbjct: 199 YEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSL----DLEDDHRLNLFDDG----- 249
Query: 319 SSLVLTNAQESDSGRFYCVAENRAG 343
+L++ N +ESD G + C+A N AG
Sbjct: 250 -TLMIRNTRESDQGEYQCMARNSAG 273
Score = 129 (50.5 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 55 DMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI 114
D+ N ++ +P+ AF++ LN L L I QI A +GL NL+ + L N + ++
Sbjct: 17 DLRFNRIREIPESAFKKLKTLNT--LLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRAL 74
Query: 115 PSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLE 174
TF+ + L L + N I ++ F + L +L + ++L I +F+ SL+
Sbjct: 75 DKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLK 134
Query: 175 SIKLNGNRL 183
++L+ N L
Sbjct: 135 RLRLDSNAL 143
Score = 75 (31.5 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 309 VIEQGEYERKSSLVLT--NAQESDSGRFYCVAENRAGIADANFTLQV 353
+ E G++ +LT +A ++D GR+ CVA+N G+ AN L V
Sbjct: 512 ITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTV 558
Score = 54 (24.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 24/101 (23%), Positives = 35/101 (34%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
KP + + E + + T+ C P ++W G N A + +
Sbjct: 290 KPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWT-RG----NGEALDGSRHLAT---- 340
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAENRAGI--ADANFTLQ 352
L L N D G+F C A N G A AN +Q
Sbjct: 341 ----SGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQ 377
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/101 (24%), Positives = 41/101 (40%)
Query: 265 EAVSSENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLV 322
+ V E TV +C + PP I+W G L + V+ G +L
Sbjct: 388 DQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHT------VLSSG------TLR 435
Query: 323 LTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFL 363
+ D G++ C A + G+ A+ +Q+T + LP L
Sbjct: 436 IDQVARHDQGQYECQAVSPLGVRKAS--VQLTVKPKALPVL 474
Score = 45 (20.9 bits), Expect = 8.0e-19, Sum P(2) = 8.0e-19
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 396 ITYPNSKNPAQIEVMANGNAHAVVNKT--PSLTPVIE--TSSFT-ERKQFPPPSYHSTEM 450
I + N+ N ++ AN A T P V+E T F E + PPP T+
Sbjct: 358 ICHANN-NQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKA 416
Query: 451 ISPNGQLPNKTLHSVIN 467
G+LP + LH+V++
Sbjct: 417 ---GGKLPQEGLHTVLS 430
Score = 37 (18.1 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 327 QESDSGRFYCVAENRAGIADANFTLQVTYRGV 358
Q ++SG+F+ E I DA Q Y V
Sbjct: 511 QITESGKFHVSGEGMLTIYDAGQADQGRYECV 542
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 256 (95.2 bits), Expect = 9.7e-19, P = 9.7e-19
Identities = 89/316 (28%), Positives = 141/316 (44%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 203 LTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 260
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPI IE + L ++ +
Sbjct: 261 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLV 319
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + + L + L NP CDC +
Sbjct: 320 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLW 379
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 380 VFRRRWRLNFNRQ--QPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVD 437
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L++ S R+ V G E + AQ
Sbjct: 438 EGHTVQFVCRADGDPPPAILWLSPRKHLVSA---KSNGRLTVFPDGTLE------VRYAQ 488
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 489 VQDNGTYLCIAANAGG 504
Score = 185 (70.2 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 54/190 (28%), Positives = 95/190 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + + C K + +PE +E T++LD+ N ++ L ++ F A +
Sbjct: 42 CPPRCECSAQD--RAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--ASFPH 96
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L + ++ GA + L +L + L N L IP F + L L+++ N I
Sbjct: 97 LEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 156
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 157 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHS 216
Query: 197 LMMIEL-HDN 205
L+++ L H N
Sbjct: 217 LIVLRLRHLN 226
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 39/155 (25%), Positives = 74/155 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N + + AF L +L+ L L + I G GL+NL ++D+S+N +
Sbjct: 100 LELNENIVSAVEPGAFNN--LFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 157
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + L+ L + N + I AF + L +L + + L I EA + SL
Sbjct: 158 LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSL 217
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
++L ++ S + L +L ++E+ P++
Sbjct: 218 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 252
>RGD|1308668 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=ISO] [GO:0021954 "central nervous
system neuron development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISO] [GO:0048715 "negative regulation
of oligodendrocyte differentiation" evidence=ISO]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 GO:GO:0021954
MEROPS:I43.001 GO:GO:0048715 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 RefSeq:NP_001094192.1 UniGene:Rn.20269
GeneID:315691 KEGG:rno:315691 NextBio:669664 EMBL:BC092632
IPI:IPI00766651 ProteinModelPortal:Q562A6 STRING:Q562A6
PhosphoSite:Q562A6 UCSC:RGD:1308668 InParanoid:Q562A6
Genevestigator:Q562A6 Uniprot:Q562A6
Length = 517
Score = 254 (94.5 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 89/316 (28%), Positives = 141/316 (44%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 100 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 157
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPI IE + L ++ +
Sbjct: 158 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLV 216
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + + L + L NP CDC +
Sbjct: 217 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLW 276
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 277 VFRRRWRLNFNRQ--QPTCATPEFVQGKEFKDFPDVLLPNYFTCRRAHIRDRKAQQVFVD 334
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L++ S R+ V G E + AQ
Sbjct: 335 EGHTVQFVCRADGDPPPAILWLSPRKHLVSA---KSNGRLTVFPDGTLE------VRYAQ 385
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 386 VQDNGTYLCIAANAGG 401
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
+ ++ GA + L NL + L N L IP F + L L+++ N I + FQ +
Sbjct: 4 VSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDL 63
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL-HDN 205
L L++ ++ L +IS AF+G SLE + L L+ P ++ L L+++ L H N
Sbjct: 64 YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN 123
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L NL+ L L + I G GL+NL ++D+S+N + + FQ + L+ L + N
Sbjct: 15 LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN 74
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
+ I AF + L +L + + L I EA + L ++L ++ S +
Sbjct: 75 DLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR 134
Query: 194 LLKLMMIELHDNPWV 208
L +L ++E+ P++
Sbjct: 135 LYRLKVLEISHWPYL 149
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 273 (101.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 70/238 (29%), Positives = 109/238 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C ++C L +P P + + LD+ NN+ + K F AGL
Sbjct: 34 CPTKCTCSAAS----VDCHGLGLRAVPRGIPRN--AERLDLDRNNITRITKMDF--AGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+ L L + I+ GA L L + L+ N L +P L FQS L L+L+ N I
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + + L + + + I AF + LE + LN N +S V S +
Sbjct: 146 QGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
K+ + LH N CDC++ + WL ++ V C P L G +D+ ++ C
Sbjct: 206 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVC 263
Score = 202 (76.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 40 ITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
I+ P +P + ++D G L +P A G++ ++ L + I I +GA
Sbjct: 278 ISCP-SPCTCSNNIVDCRGKGLMEIP--ANLPEGIVEIR---LEQNSIKAIPAGAFTQYK 331
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L ID+S N ++ I FQ ++ L L L N I++I KG F + L L ++ +++
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKI 391
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ F ++L + L N+L PL + + L NP+VCDC+++ W
Sbjct: 392 NCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLK----W 447
Query: 220 LADK-KNVPVQPA---CTGPERLSGKVFSDLHADDFACKPEIRMDSRY 263
LAD ++ P++ + C+ P RL+ K S + + F C SR+
Sbjct: 448 LADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRF 495
Score = 186 (70.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P ++R L ++L+ N IS + F + L L +S +RL
Sbjct: 753 DVTELYLEGNHLTAVPR-ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRL 811
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ P C+ PE ++ ++ F CK
Sbjct: 872 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCK 906
Score = 173 (66.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L NL +I+LS+N + + F +++L L N + + F+ + GL
Sbjct: 550 TGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKT 609
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + + + +S + F G S+ + L NR++ + L+ L I L NP+ C+C
Sbjct: 610 LMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNC 669
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
++ + WL ++ V P C P L D+ DF C
Sbjct: 670 HLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 711
Score = 157 (60.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 47/166 (28%), Positives = 83/166 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEA-FRRAGLL 75
CP C C+ G ++C ++ L+ IP +T L ++ N + +L F++ L
Sbjct: 505 CPEKCRCE---GTI-VDCSNQKLVRIPSHLPEYVTD-LRLNDNEVSVLEATGIFKK--LP 557
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+K+ L+ I ++ GA DG ++ E+ L+ N L ++ F+ + L+ L L N I
Sbjct: 558 NLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLI 617
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
+ F + + L + ++R+ I+P AFT SL +I L N
Sbjct: 618 GCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 156 (60.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 64/253 (25%), Positives = 112/253 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C ++CR K L+ IP PE + ++ + N+++ +P AF +
Sbjct: 280 CPSPCTCS----NNIVDCRGKGLMEIPANLPEG-IVEIR-LEQNSIKAIPAGAFTQ--YK 331
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+++ +++ I I A GL +L + L N +T I F + L+ L L N I
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKI 391
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + FQ + L L + +++L+ IS F +S++++ L N P + L
Sbjct: 392 NCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN-----PF-VCDCHL 445
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGKVFSDLHADDFA 252
K + L DNP S LA+K+ ++ C+G E + S+ D
Sbjct: 446 KWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMD-LV 504
Query: 253 CKPEIRMDSRYVE 265
C + R + V+
Sbjct: 505 CPEKCRCEGTIVD 517
Score = 134 (52.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + C +K L +P ++T+ L + GN+L +P+E + L +
Sbjct: 725 CPEQCTCM----ETVVRCSNKGLRALPRGMPKDVTE-LYLEGNHLTAVPREL---SALRH 776
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L + L+ I + + +++L + LS N L IP F +R LR L L N IS
Sbjct: 777 LTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDIS 836
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +G+F + L L + + L
Sbjct: 837 SVPEGSFNDLTSLSHLALGTNPL 859
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 226 VPVQPACTGPERLSGKV-FSDLHADDFACKPEIRMDSRYVE 265
VP+ P + G SD H D F+C + + + E
Sbjct: 954 VPINTCIQNPCQHGGTCHLSDSHKDGFSCSCPLGFEGQRCE 994
Score = 38 (18.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 474 INDTRKPEGLSPEPHND 490
+ D +K E + P PH++
Sbjct: 253 VADVQKKEYVCPAPHSE 269
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 273 (101.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 70/238 (29%), Positives = 109/238 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C ++C L +P P + + LD+ NN+ + K F AGL
Sbjct: 34 CPTKCTCSAAS----VDCHGLGLRAVPRGIPRN--AERLDLDRNNITRITKMDF--AGLK 85
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+ L L + I+ GA L L + L+ N L +P L FQS L L+L+ N I
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I + AF+ + + L + + + I AF + LE + LN N +S V S +
Sbjct: 146 QGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
K+ + LH N CDC++ + WL ++ V C P L G +D+ ++ C
Sbjct: 206 KIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVC 263
Score = 202 (76.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 40 ITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
I+ P +P + ++D G L +P A G++ ++ L + I I +GA
Sbjct: 278 ISCP-SPCTCSNNIVDCRGKGLMEIP--ANLPEGIVEIR---LEQNSIKAIPAGAFTQYK 331
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L ID+S N ++ I FQ ++ L L L N I++I KG F + L L ++ +++
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKI 391
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ F ++L + L N+L PL + + L NP+VCDC+++ W
Sbjct: 392 NCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLK----W 447
Query: 220 LADK-KNVPVQPA---CTGPERLSGKVFSDLHADDFACKPEIRMDSRY 263
LAD ++ P++ + C+ P RL+ K S + + F C SR+
Sbjct: 448 LADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRF 495
Score = 186 (70.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P ++R L ++L+ N IS + F + L L +S +RL
Sbjct: 753 DVTELYLEGNHLTAVPR-ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRL 811
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I AF G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ P C+ PE ++ ++ F CK
Sbjct: 872 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCK 906
Score = 173 (66.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L NL +I+LS+N + + F +++L L N + + F+ + GL
Sbjct: 550 TGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKT 609
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + + + +S + F G S+ + L NR++ + L+ L I L NP+ C+C
Sbjct: 610 LMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNC 669
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
++ + WL ++ V P C P L D+ DF C
Sbjct: 670 HLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 711
Score = 157 (60.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 47/166 (28%), Positives = 83/166 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEA-FRRAGLL 75
CP C C+ G ++C ++ L+ IP +T L ++ N + +L F++ L
Sbjct: 505 CPEKCRCE---GTI-VDCSNQKLVRIPSHLPEYVTD-LRLNDNEVSVLEATGIFKK--LP 557
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+K+ L+ I ++ GA DG ++ E+ L+ N L ++ F+ + L+ L L N I
Sbjct: 558 NLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLI 617
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
+ F + + L + ++R+ I+P AFT SL +I L N
Sbjct: 618 GCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 156 (60.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 64/253 (25%), Positives = 112/253 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C ++CR K L+ IP PE + ++ + N+++ +P AF +
Sbjct: 280 CPSPCTCS----NNIVDCRGKGLMEIPANLPEG-IVEIR-LEQNSIKAIPAGAFTQ--YK 331
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+++ +++ I I A GL +L + L N +T I F + L+ L L N I
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKI 391
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + FQ + L L + +++L+ IS F +S++++ L N P + L
Sbjct: 392 NCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN-----PF-VCDCHL 445
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGKVFSDLHADDFA 252
K + L DNP S LA+K+ ++ C+G E + S+ D
Sbjct: 446 KWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMD-LV 504
Query: 253 CKPEIRMDSRYVE 265
C + R + V+
Sbjct: 505 CPEKCRCEGTIVD 517
Score = 134 (52.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + C +K L +P ++T+ L + GN+L +P+E + L +
Sbjct: 725 CPEQCTCM----ETVVRCSNKGLRALPRGMPKDVTE-LYLEGNHLTAVPREL---SALRH 776
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L + L+ I + + +++L + LS N L IP F +R LR L L N IS
Sbjct: 777 LTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDIS 836
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+ +G+F + L L + + L
Sbjct: 837 SVPEGSFNDLTSLSHLALGTNPL 859
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 226 VPVQPACTGPERLSGKV-FSDLHADDFACKPEIRMDSRYVE 265
VP+ P + G SD H D F+C + + + E
Sbjct: 961 VPINTCIQNPCQHGGTCHLSDSHKDGFSCSCPLGFEGQRCE 1001
Score = 38 (18.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 474 INDTRKPEGLSPEPHND 490
+ D +K E + P PH++
Sbjct: 253 VADVQKKEYVCPAPHSE 269
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 255 (94.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 90/316 (28%), Positives = 141/316 (44%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 203 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 260
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPIS IE + L ++ +
Sbjct: 261 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 319
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + L + L NP CDC +
Sbjct: 320 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLW 379
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 380 VFRRRWRLNFNRQ--QPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVD 437
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L++ S R+ V G E + AQ
Sbjct: 438 EGHTVQFVCRADGDPPPAILWLSPRKHLVSA---KSNGRLTVFPDGTLE------VRYAQ 488
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 489 VQDNGTYLCIAANAGG 504
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 55/190 (28%), Positives = 95/190 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + + C K + +PE +E T++LD+ N ++ L ++ F A +
Sbjct: 42 CPPRCECSAQD--RAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--ASFPH 96
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L + ++ GA + L NL + L N L IP F + L L+++ N I
Sbjct: 97 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 156
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 157 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 216
Query: 197 LMMIEL-HDN 205
L+++ L H N
Sbjct: 217 LIVLRLRHLN 226
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 39/155 (25%), Positives = 73/155 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N + + AF L NL+ L L + I G GL+NL ++D+S+N +
Sbjct: 100 LELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 157
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + L+ L + N + I AF + L +L + + L I EA + L
Sbjct: 158 LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGL 217
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
++L ++ S + L +L ++E+ P++
Sbjct: 218 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 252
>MGI|MGI:2444885 [details] [associations]
symbol:Lrit2 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2444885 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HSSP:P07359 GeneTree:ENSGT00700000104028 CTD:340745
HOGENOM:HOG000082676 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
eggNOG:NOG331103 EMBL:BC057628 IPI:IPI00277844 RefSeq:NP_775594.1
UniGene:Mm.134302 ProteinModelPortal:Q6PFC5 SMR:Q6PFC5 PRIDE:Q6PFC5
Ensembl:ENSMUST00000057176 GeneID:239038 KEGG:mmu:239038
UCSC:uc007tbs.1 InParanoid:Q6PFC5 OMA:HIGPGIN NextBio:383967
Bgee:Q6PFC5 Genevestigator:Q6PFC5 Uniprot:Q6PFC5
Length = 549
Score = 253 (94.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 93/335 (27%), Positives = 149/335 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
C C C + + ++C L IP+ EL QV + + L L + F + +
Sbjct: 24 CLPECTCSEESFGRSLQCMSMSLGKIPDNFPEELKQVR-IENSPLFELSQGFF--TNMSS 80
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L+L ++ I GAL+ L L E+ L N L S+P F++ LR L+L N I
Sbjct: 81 LEYLWLNFNNVTVIHLGALEDLPELRELRLEGNKLRSVPWTAFRATPLLRVLDLKHNRID 140
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ + A QF+ L+ LD+S +RL +S F + + + G + F L
Sbjct: 141 SVPELALQFLTNLIYLDISSNRLTVVSKGVFLNWPAYQKRQQLGCG-AEF--------LS 191
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLAD--KKNVPVQP--ACTGPERLSGKVFSDLHADDFA 252
M++ LH+NPW+CDC +R + ++ + V C GP +G++ LH +
Sbjct: 192 NMVLSLHNNPWLCDCRLRGLAQFVKSVGPPFILVNSYLVCQGPVSKAGQL---LHETELG 248
Query: 253 -C-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI 310
C KP I S V +N T+ C + P I+W + S+++ V+
Sbjct: 249 VCMKPTISTPSVNVTIQVGKNVTLQCFAQASPSPTIAWKY---------PLSTWREFDVL 299
Query: 311 EQGEYER--KSSLVLTNAQESDSGRFYCVAENRAG 343
E S LV+ AQ D G + C+A N G
Sbjct: 300 ASPIAEGIILSQLVIPAAQLVDGGNYTCMAFNSIG 334
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 254 (94.5 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 89/316 (28%), Positives = 141/316 (44%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 197 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 254
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPI IE + L ++ +
Sbjct: 255 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLV 313
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + + L + L NP CDC +
Sbjct: 314 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLW 373
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 374 VFRRRWRLNFNRQ--QPTCATPEFVQGKEFKDFPDVLLPNYFTCRRAHIRDRKAQQVFVD 431
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L++ S R+ V G E + AQ
Sbjct: 432 EGHTVQFVCRADGDPPPAILWLSPRKHLVSA---KSNGRLTVFPDGTLE------VRYAQ 482
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 483 VQDNGTYLCIAANAGG 498
Score = 188 (71.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 55/190 (28%), Positives = 95/190 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + + C K + +PE +E T++LD+ N ++ L ++ F A +
Sbjct: 36 CPPRCECSAQD--RAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--ASFPH 90
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L + ++ GA + L NL + L N L IP F + L L+++ N I
Sbjct: 91 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 150
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 151 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 210
Query: 197 LMMIEL-HDN 205
L+++ L H N
Sbjct: 211 LIVLRLRHLN 220
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 39/155 (25%), Positives = 73/155 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N + + AF L NL+ L L + I G GL+NL ++D+S+N +
Sbjct: 94 LELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 151
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + L+ L + N + I AF + L +L + + L I EA + L
Sbjct: 152 LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGL 211
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
++L ++ S + L +L ++E+ P++
Sbjct: 212 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 246
>MGI|MGI:3605040 [details] [associations]
symbol:Lrrc24 "leucine rich repeat containing 24"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3605040 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
eggNOG:NOG255871 GeneTree:ENSGT00700000104028 CTD:441381
HOGENOM:HOG000234857 HOVERGEN:HBG079563 OMA:NITLAHA
OrthoDB:EOG4DR9CG EMBL:AK048678 EMBL:AK078176 EMBL:BC116884
EMBL:BC116886 IPI:IPI00221813 RefSeq:NP_932787.1 UniGene:Mm.289666
ProteinModelPortal:Q8BHA1 SMR:Q8BHA1 PRIDE:Q8BHA1
Ensembl:ENSMUST00000049956 GeneID:378937 KEGG:mmu:378937
UCSC:uc007wme.1 InParanoid:Q14AD4 NextBio:401012 Bgee:Q8BHA1
CleanEx:MM_LRRC24 Genevestigator:Q8BHA1
GermOnline:ENSMUSG00000033707 Uniprot:Q8BHA1
Length = 521
Score = 245 (91.3 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 71/279 (25%), Positives = 126/279 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C C +EC L +P P TQ L + N++ L + + A L
Sbjct: 31 CPAACRCY----SATVECGALRLRVVPPGIPPG--TQTLFLQDNSIAHLEQGSL--APLA 82
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L+L + ++SGA L+E+ L+ N L + F + LR L LA N +
Sbjct: 83 ALRHLYLHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFVGLVQLRVLYLAGNQL 142
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+K+ F +P L +L + E+ +E + +A G SL + L+ N+L +++PL
Sbjct: 143 AKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISKEALQPLS 202
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLAD--KKNVPVQP---ACTGPERLSGKVFSDLHADD 250
L ++ L +NPW CDC + + W+ + ++ + + C P RL+ + ++
Sbjct: 203 SLQVLRLTENPWRCDCALHWLGSWIKEGGRRLLSSRDKKITCAEPPRLALQSLLEVSGGS 262
Query: 251 FAC-KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISW 288
C P + ++ A E+ V C+ P + W
Sbjct: 263 LICIPPSVNVEPPEFTANLGEDLQVACQASGYPQPLVVW 301
Score = 51 (23.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L LTN + +G++ C A N G A F L V
Sbjct: 338 LFLTNITLAHAGKYECEAANAGGKARVPFHLLV 370
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 254 (94.5 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 89/316 (28%), Positives = 141/316 (44%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + L
Sbjct: 203 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCL 260
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LT++P L + + +LR LNL+ NPI IE + L ++ +
Sbjct: 261 YGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLV 319
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN+L+ + + L + L NP CDC +
Sbjct: 320 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLW 379
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C PE + GK F D L + F C+ D + +
Sbjct: 380 VFRRRWRLNFNRQ--QPTCATPEFVQGKEFKDFPDVLLPNYFTCRRAHIRDRKAQQVFVD 437
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + L++ S R+ V G E + AQ
Sbjct: 438 EGHTVQFVCRADGDPPPAILWLSPRKHLVSA---KSNGRLTVFPDGTLE------VRYAQ 488
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 489 VQDNGTYLCIAANAGG 504
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 55/190 (28%), Positives = 95/190 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + + C K + +PE +E T++LD+ N ++ L ++ F A +
Sbjct: 42 CPPRCECSAQD--RAVLCHRKRFVAVPEGIPTE-TRLLDLGKNRIKTLNQDEF--ASFPH 96
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L + ++ GA + L NL + L N L IP F + L L+++ N I
Sbjct: 97 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 156
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 157 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 216
Query: 197 LMMIEL-HDN 205
L+++ L H N
Sbjct: 217 LIVLRLRHLN 226
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 39/155 (25%), Positives = 73/155 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N + + AF L NL+ L L + I G GL+NL ++D+S+N +
Sbjct: 100 LELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 157
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + L+ L + N + I AF + L +L + + L I EA + L
Sbjct: 158 LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGL 217
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
++L ++ S + L +L ++E+ P++
Sbjct: 218 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 252
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 258 (95.9 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 92/316 (29%), Positives = 145/316 (45%)
Query: 39 LITIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L +IP S L VL + N+ + +F+R L L+ L ++ ++ + S L
Sbjct: 196 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR--LYRLKVLEISHWPYLDTMTSNCL 253
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ LTSIP ++ + + +LR LNL+ NPI IE + L ++ +
Sbjct: 254 YGL-NLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLV 312
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+L + P AF G L + ++GN L+ + + L + L +NP CDC +
Sbjct: 313 GGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLW 372
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFACKPEIRMDSRYVEAVSS 269
+ + W + QP C+ PE + GK F D L + F C+ D + +
Sbjct: 373 VFRRRWRLNFNKQ--QPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVD 430
Query: 270 ENATV--VCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E TV VCR D PP AI W + R L +T + R+ V G E + AQ
Sbjct: 431 EGHTVHFVCRADGDPPPAIMWL-SPRKHLISTKTNG--RLTVFPDGTLE------VRYAQ 481
Query: 328 ESDSGRFYCVAENRAG 343
D+G + C+A N G
Sbjct: 482 IQDNGTYLCIASNAGG 497
Score = 186 (70.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 57/190 (30%), Positives = 95/190 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + ++ + C K + +PE +E T+ LD+ N ++ L ++ F A +
Sbjct: 35 CPPRCECSAQ--ERAVLCHRKRFMVVPEGIPTE-TRQLDLGKNRIKTLNQDEF--ANYPH 89
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L++L L I I+ GA + L NL + L N L IP F + L L+++ N I
Sbjct: 90 LEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 149
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L L++ ++ L +IS AF+G SLE + L L+ P ++ L
Sbjct: 150 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 209
Query: 197 LMMIEL-HDN 205
L+++ L H N
Sbjct: 210 LIVLRLRHLN 219
Score = 128 (50.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 39/155 (25%), Positives = 73/155 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N + + AF L NL+ L L + I G GL+NL ++D+S+N +
Sbjct: 93 LELNENIISAIEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 150
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + L+ L + N + I AF + L +L + + L I EA + L
Sbjct: 151 LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGL 210
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
++L ++ S + L +L ++E+ P++
Sbjct: 211 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 245
Score = 38 (18.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 458 PNKTLHSVINISNPDLINDTR 478
PNKT + N N N TR
Sbjct: 518 PNKTFAFISNQPNESDANSTR 538
>UNIPROTKB|Q8N967 [details] [associations]
symbol:LRTM2 "Leucine-rich repeat and transmembrane
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 EMBL:CH471116 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HSSP:P07359 HOGENOM:HOG000290674
EMBL:AK095610 EMBL:AK124687 EMBL:BC146894 EMBL:BC146910
EMBL:BC150568 IPI:IPI00167619 RefSeq:NP_001034118.1
RefSeq:NP_001157397.1 RefSeq:NP_001157398.1 UniGene:Hs.585579
ProteinModelPortal:Q8N967 SMR:Q8N967 STRING:Q8N967
PhosphoSite:Q8N967 DMDM:74760021 PRIDE:Q8N967
Ensembl:ENST00000299194 Ensembl:ENST00000535041
Ensembl:ENST00000543818 GeneID:654429 KEGG:hsa:654429
UCSC:uc001qjt.2 CTD:654429 GeneCards:GC12P001929 HGNC:HGNC:32443
neXtProt:NX_Q8N967 PharmGKB:PA142671500 eggNOG:NOG248110
HOVERGEN:HBG081938 InParanoid:Q8N967 OMA:GEHEDQK OrthoDB:EOG4C5CKK
PhylomeDB:Q8N967 GenomeRNAi:654429 NextBio:123980
ArrayExpress:Q8N967 Bgee:Q8N967 CleanEx:HS_LRTM2
Genevestigator:Q8N967 GermOnline:ENSG00000166159 Uniprot:Q8N967
Length = 370
Score = 244 (91.0 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 61/191 (31%), Positives = 94/191 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
+D SG L +P + + L L + + S A L++L +DLS+N L
Sbjct: 52 VDCSGLGLTTVPPDVPAAT-----RTLLLLNNKLSALPSWAFANLSSLQRLDLSNNFLDR 106
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P F + L +L L N I +++ + P L LD+S + L + P F G +L
Sbjct: 107 LPRSIFGDLTNLTELQLRNNSIRTLDRDLLRHSPLLRHLDLSINGLAQLPPGLFDGLLAL 166
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWL---ADKKNVPVQP 230
S+ L NRL + + EPL L ++++ DNPW CDCN+R K W+ + + Q
Sbjct: 167 RSLSLRSNRLQNLDRLTFEPLANLQLLQVGDNPWECDCNLREFKHWMEWFSYRGGRLDQL 226
Query: 231 ACTGPERLSGK 241
ACT P+ L GK
Sbjct: 227 ACTLPKELRGK 237
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 251 (93.4 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 76/289 (26%), Positives = 135/289 (46%)
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
++ G+L GL NL + ++ +T++P+ + L LNL+ NPIS + +G+F+ +
Sbjct: 236 EVAPGSLRGL-NLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVR 294
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L +L ++ + L I P+AF G + + + L+ N LS + + L + + NP
Sbjct: 295 LRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLA 354
Query: 209 CDCNMRSIKMWLADKK---NVPVQ-PACTGPERLSGKVFSDLHA----DDFAC-KPEIRM 259
CDC + +W+ ++ N + PAC P + G +L + F C KP+IR
Sbjct: 355 CDCRL----LWIVQRRKTLNFDGRLPACATPAEVRGDALHNLPDSVLFEYFVCRKPKIRE 410
Query: 260 DS-RYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK 318
++V A ++ +CR + P ++W ++ +S R V+ G
Sbjct: 411 RRLQHVTATEGDDVRFLCRAEGEPAPTVAWVTPQH---HSVTAASRGRARVLPGG----- 462
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFLGGGH 367
+L + + + DSG + CVA N AG D F +T + G GH
Sbjct: 463 -TLTIADTRPQDSGTYTCVASN-AGGNDTYFAT-LTVQPAANRTQGDGH 508
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 53/187 (28%), Positives = 86/187 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQIL-PKEAFRRAGLL 75
CP+ C C + + C + L IPE +E T++L++S N ++ L P + A L
Sbjct: 24 CPARCECS--ASTRTVACGRRRLTAIPEGIPAE-TRMLELSRNRIRCLNPGDL---ASLP 77
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L++L L I ++ GA L L + L N L IP F + L L+L+ N +
Sbjct: 78 TLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKL 137
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ +FQ + L +L++ ++ L IS AF G L + L L+ S+ L
Sbjct: 138 VILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLR 197
Query: 196 KLMMIEL 202
L + L
Sbjct: 198 GLGALRL 204
Score = 128 (50.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD++ N + + AF A L L+ L L + I G L +L +DLS+N L
Sbjct: 82 LDLNHNVIAHVEPGAF--ANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVI 139
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ +FQ +R L+ L + N + I + AF + GL +L + L +SPE+ + L
Sbjct: 140 LLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGL 199
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPW 207
+++L ++ ++ + L L +E+ DN W
Sbjct: 200 GALRLRHLAIAALEDQNFQKLPGLSHLEI-DN-W 231
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+LD+S N L IL +F+ L +LQ+L + + I A GL L E+ L LT
Sbjct: 129 LLDLSENKLVILLDFSFQ--DLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLT 186
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAK 171
S+ + +R L L L I+ +E FQ +PGL L++ LE ++P + G
Sbjct: 187 SLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNWPLLEEVAPGSLRGL- 245
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
+L S+ + ++ P ++ L + L NP
Sbjct: 246 NLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNP 280
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 40/137 (29%), Positives = 66/137 (48%)
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
L L+R I ++ G L L L E+DL+ N++ + F ++ LR L L N + I
Sbjct: 58 LELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIP 117
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
G F + L LD+SE++L + +F +SL+ +++ N L R+ LL L
Sbjct: 118 PGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAE 177
Query: 200 IELHDNPWVCDCNMRSI 216
+ L CN+ S+
Sbjct: 178 LTLER------CNLTSL 188
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 31/90 (34%), Positives = 54/90 (60%)
Query: 47 ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
++ LT L++S N + ++P+ +FR L+ L++L LA + I+ A GL + ++L
Sbjct: 268 QAHLT-CLNLSHNPISMVPRGSFR--DLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNL 324
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
SDNLL+++ TF SV L L + NP++
Sbjct: 325 SDNLLSTLEENTFHSVNTLETLRVDGNPLA 354
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 31/110 (28%), Positives = 62/110 (56%)
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
LNL L + +I + + AL +L ++LS N ++ +P +F+ + LR+L+LA
Sbjct: 245 LNLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGAL 304
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLS 184
++ IE AF + + L++S++ L + F +LE+++++GN L+
Sbjct: 305 LAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLA 354
>UNIPROTKB|A1KZ92 [details] [associations]
symbol:PXDNL "Peroxidasin-like protein" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004601 "peroxidase activity"
evidence=ISS] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
GO:GO:0005737 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0090305 GO:GO:0004601 GO:GO:0004519 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0042744
SUPFAM:SSF48113 PROSITE:PS00435 EMBL:CH471068 MEROPS:I43.001
Gene3D:1.10.640.10 eggNOG:NOG262194 HOGENOM:HOG000016084
EMBL:AC090186 EMBL:EU170240 EMBL:AY877349 EMBL:AC103958
EMBL:AC107374 EMBL:AC011128 EMBL:AC012413 EMBL:AK058200
EMBL:AK131524 IPI:IPI00065049 IPI:IPI00890814 RefSeq:NP_653252.3
UniGene:Hs.444882 ProteinModelPortal:A1KZ92 SMR:A1KZ92
PeroxiBase:5398 PeroxiBase:5827 PhosphoSite:A1KZ92 PRIDE:A1KZ92
Ensembl:ENST00000356297 Ensembl:ENST00000543296 GeneID:137902
KEGG:hsa:137902 UCSC:uc003xqu.4 CTD:137902 GeneCards:GC08M052232
HGNC:HGNC:26359 HPA:HPA007919 neXtProt:NX_A1KZ92
PharmGKB:PA142671110 HOVERGEN:HBG108312 OMA:EFRYNDL
OrthoDB:EOG4HDSSN GenomeRNAi:137902 NextBio:83705 Bgee:A1KZ92
CleanEx:HS_PXDNL Genevestigator:A1KZ92 Uniprot:A1KZ92
Length = 1463
Score = 257 (95.5 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 75/263 (28%), Positives = 116/263 (44%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I +I A L NL + L++N + I F+ + L L L +N I ++K F+ +
Sbjct: 62 IREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTFKGL 121
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L + ++LE + PE F LE + L+ N+LS P S L L + L N
Sbjct: 122 ISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSNA 181
Query: 207 WVCDCNMR---SIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK-PEIRMDSR 262
VCDC++ + A + C P RL G+ + + ++F C+ P I + +
Sbjct: 182 LVCDCDLMWLGELLQGFAQHGHTQAAATCEYPRRLHGRAVASVTVEEFNCQSPRITFEPQ 241
Query: 263 YVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLV 322
VE S CR + P I W N L R+ V + G +L+
Sbjct: 242 DVEVPSGNTVYFTCRAEGNPKPEIIWIHNNHSL----DLEDDTRLNVFDDG------TLM 291
Query: 323 LTNAQESDSGRFYCVAENRAGIA 345
+ N +ESD G + C+A N AG A
Sbjct: 292 IRNTRESDQGVYQCMARNSAGEA 314
Score = 186 (70.5 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 50/167 (29%), Positives = 84/167 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C+C K + C L IP+ P+ T VLD+ N ++ +P AF++ L N
Sbjct: 24 CPSRCLCF----KSTVRCMHLMLDHIPQVPQQ--TTVLDLRFNRIREIPGSAFKK--LKN 75
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L HI +I A +GL NL+ + L N + ++ TF+ + L L + N +
Sbjct: 76 LNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTFKGLISLEHLYIHFNQLE 135
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
++ F + L +L + ++L I +F+ SL+ ++L+ N L
Sbjct: 136 MLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSNAL 182
Score = 122 (48.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+DL N + IP F+ ++ L L L N I KI + AF+ + L+ L + ++ + +
Sbjct: 55 LDLRFNRIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALD 114
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ F G SLE + ++ N+L + LL+L + LH+N
Sbjct: 115 KQTFKGLISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNN 156
Score = 74 (31.1 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 309 VIEQGEY--ERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+ E G++ + + +L + +A D GR+ CVA N G+A N L VT
Sbjct: 551 ITESGKFHVDDEGTLTIYDAGFPDQGRYECVARNSFGLAVTNMFLTVT 598
Score = 62 (26.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 27/109 (24%), Positives = 39/109 (35%)
Query: 246 LHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQ 305
L KP + + E + + T+ C P I+W + L L+ + +
Sbjct: 321 LRYSSLPAKPSFVIQPQDTEVLIGTSTTLECMATGHPHPLITWTRDNGLELDGSRHVA-- 378
Query: 306 RIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGI--ADANFTLQ 352
S L L N + D GRF C A N G A AN +Q
Sbjct: 379 -----------TSSGLYLQNITQRDHGRFTCHANNSHGTVQAAANIIVQ 416
Score = 51 (23.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/165 (22%), Positives = 68/165 (41%)
Query: 198 MMIELHDNPWVC--DCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKP 255
+++E H W+C D N + +W +PV+ T LS L D A
Sbjct: 429 VVLEEHAVEWLCEADGNPPPVIVWTKTGGQLPVEGQHTV---LSS---GTLRIDRAAQHD 482
Query: 256 EIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI--EQG 313
+ + + + V ++ + +V ++ P A++ + L +T+ + I + QG
Sbjct: 483 QGQYECQAVSSLGVKKVSVQL---TVKPKALAVFTQ---LPQDTSVEVGKNINISCHAQG 536
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGV 358
E + + Q ++SG+F+ E I DA F Q Y V
Sbjct: 537 EPQPIITWNKEGVQITESGKFHVDDEGTLTIYDAGFPDQGRYECV 581
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 252 (93.8 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 92/327 (28%), Positives = 151/327 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++G NL +P +A AGL NL+ + + ++ AL NL +DL+ N +
Sbjct: 217 LVIAGINLTEIPDDAL--AGLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNPINR 274
Query: 114 IPSLTFQSVRFLRDLNLARNP-ISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAK 171
I F ++ L++L + P + I+ A +P L K++ + + RL +I P AF
Sbjct: 275 IRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLP 334
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVP-VQP 230
LES+ LN N LS ++E L L I +H NP CDC +R I M +K N+ ++P
Sbjct: 335 KLESLMLNTNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINM---NKTNIRFMEP 391
Query: 231 A---CTGPERLSGKVFSDLHADDFA--CKPEIRMDS--RYVEAVSSENATVVCRVDSIPP 283
C P G+ +H D C P I +S ++ + ++ CR + P
Sbjct: 392 DSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSDLDVEADSYVSLHCRATAEPQ 451
Query: 284 AAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342
I W +G+ LL NT ++ +V +G E + +T + G + C+A N
Sbjct: 452 PEIYWITPSGKKLLPNTM---REKFYVHSEGTLEIRG---IT---PKEGGLYTCIATNLV 502
Query: 343 GIADANFTLQVTYRGVGLPFLGGGHIN 369
G AD ++ + G +P G +N
Sbjct: 503 G-ADLK-SIMIKVGG-SVPQDNNGSLN 526
Score = 184 (69.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 53/160 (33%), Positives = 84/160 (52%)
Query: 49 ELTQVLD--MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
+++Q+L + N L LP++ GL NLQ+L++ + I GA GL NL+ + L
Sbjct: 114 KMSQLLSVYLEENKLTELPEKCLY--GLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHL 171
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEA 166
+ N L I S F ++ L L L NPI +I+ FQ + L L ++ L I +A
Sbjct: 172 NSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIAGINLTEIPDDA 231
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
G ++LESI NRLS P +++ + L ++L+ NP
Sbjct: 232 LAGLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNP 271
Score = 159 (61.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 50/191 (26%), Positives = 94/191 (49%)
Query: 17 CPSTCICK---WKGGKQ-WME-----CRDKFLITIPEAPESELTQVLDMSGNNL-QILPK 66
CP C C+ W + +ME C D L+ P ++ TQ+L + NN+ +I
Sbjct: 29 CPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPAD-TQILLLQTNNIARIEHS 87
Query: 67 EAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLR 126
F +NL L L++ ++ + + + ++ L+ + L +N LT +P + L+
Sbjct: 88 TDFP----VNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQ 143
Query: 127 DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186
+L + N +S I GAF + L++L ++ +RL+ I+ + F +LE + L N +
Sbjct: 144 ELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRI 203
Query: 187 PVRSVEPLLKL 197
+ +PL+KL
Sbjct: 204 KDMNFQPLVKL 214
Score = 139 (54.0 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 56 MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115
M G+N I K+ L+ L+ L +A ++ +I AL GL NL I DN L+ +P
Sbjct: 194 MLGDNPIIRIKD-MNFQPLVKLRSLVIAGINLTEIPDDALAGLENLESISFYDNRLSKVP 252
Query: 116 SLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAKSLE 174
+ Q L+ L+L +NPI++I +G F + L +L ++ L I A L
Sbjct: 253 QVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLR 312
Query: 175 SIKLNGN-RLSHFPVRSVEPLLKLMMIELHDN 205
I+ N RLS+ + L KL + L+ N
Sbjct: 313 KIEATNNPRLSYIHPNAFFRLPKLESLMLNTN 344
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
Q L L +I +I+ D NL +DLS N L+S+ ++ Q + L + L N +++
Sbjct: 72 QILLLQTNNIARIEHST-DFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTE 130
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKL 197
+ + + L +L ++ + L ISP AF G +L + LN NRL + + L L
Sbjct: 131 LPEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNL 190
Query: 198 MMIELHDNP 206
++ L DNP
Sbjct: 191 EILMLGDNP 199
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 250 (93.1 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 85/302 (28%), Positives = 144/302 (47%)
Query: 64 LPKEAFRRA-GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSV 122
L + FRR GLL+L+ + ++ +G+L GL NL + ++ +T++P+ +
Sbjct: 213 LEDQNFRRLPGLLHLEIDNWPL--LEEVAAGSLRGL-NLTSLSVTHTNITAVPAAALRHQ 269
Query: 123 RFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNR 182
L LNL+ NPIS + +G+F+ + L +L ++ + L + P+AF G + + + L+ N
Sbjct: 270 AHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSNNL 329
Query: 183 LSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK---NVPVQ-PACTGPERL 238
LS + + L + + NP CDC + +W+ ++ N + PAC P +
Sbjct: 330 LSTLEESTFHSVNTLETLRVDGNPLACDCRL----LWIVQRRKTLNFDGRLPACATPAEV 385
Query: 239 SGKVFSDLHA----DDFAC-KPEIRMDS-RYVEAVSSENATVVCRVDSIPPAAISWYWNG 292
G +L + F C KP+IR + V A + E+ +CR + P ++W
Sbjct: 386 RGDALRNLPDSVLFEYFVCRKPKIRERRLQRVTATAGEDVRFLCRAEGEPAPTVAWVTPQ 445
Query: 293 RLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANF-TL 351
+ T S R V+ G E + +A+ DSG + CVA N AG D F TL
Sbjct: 446 HRPVTAT---SAGRARVLPGGTLE------IQDARPQDSGTYTCVASN-AGGNDTYFATL 495
Query: 352 QV 353
V
Sbjct: 496 TV 497
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 51/187 (27%), Positives = 89/187 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQIL-PKEAFRRAGLL 75
CP+ C C + + + C + L +P+ +E T++L++S N ++ L P + A L
Sbjct: 25 CPARCECTVQ--TRAVACTRRRLTAVPDGIPAE-TRLLELSRNRIRCLNPGDL---AALP 78
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L++L L+ I ++ GA L L + L N L IP F + L L+L+ N +
Sbjct: 79 ALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKL 138
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ FQ + L +L++ ++ L +S AF G +LE + L L+ S+ L
Sbjct: 139 VILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLR 198
Query: 196 KLMMIEL 202
L + L
Sbjct: 199 SLGALRL 205
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 44/154 (28%), Positives = 73/154 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD+S N + + AF A L L+ L L + I G L NL +DLS+N L
Sbjct: 83 LDLSENAIAHVEPGAF--ANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVI 140
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ TFQ + LR L + N + + + AF + L +L + L +S E+ +SL
Sbjct: 141 LLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRSL 200
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPW 207
+++L ++ ++ L L+ +E+ DN W
Sbjct: 201 GALRLRHLAIASLEDQNFRRLPGLLHLEI-DN-W 232
Score = 121 (47.7 bits), Expect = 0.00057, P = 0.00057
Identities = 35/135 (25%), Positives = 72/135 (53%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
L +L + +N +L + A LNL L + +I + + AL +L ++LS N
Sbjct: 221 LPGLLHLEIDNWPLLEEVAAGSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHN 280
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
++++P +F+ + LR+L+LA ++ +E AF + + L++S + L + F
Sbjct: 281 PISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHS 340
Query: 170 AKSLESIKLNGNRLS 184
+LE+++++GN L+
Sbjct: 341 VNTLETLRVDGNPLA 355
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 111 LTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
LT++P R L L+RN I + G +P L +LD+SE+ + H+ P AF
Sbjct: 45 LTAVPDGIPAETRLLE---LSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFANL 101
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
L ++L GN+L P L L +++L +N V
Sbjct: 102 PRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLV 139
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 239 (89.2 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 73/300 (24%), Positives = 137/300 (45%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N++ + ++ + + L +L L+ ++ ++D +L L++L + LS N ++
Sbjct: 288 LHLSNNSIARIHRKGW--SFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISH 345
Query: 114 IPSLTFQSVRFLRDLNLARNPIS-KIE--KGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
I F+ +R LR L+L N IS IE GAF + L KL + ++++ ++ AF+G
Sbjct: 346 IAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGL 405
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQ 229
+ LE + L GN + + + L + + + ++CDC ++ + WL + V
Sbjct: 406 EGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVT 465
Query: 230 PACTGPERLSGKVFSDLHADDFAC----KPEIRMDSRYVEAVSSENATVVCRVDSIPPAA 285
C PE L G+ + + F C KP+I A+ ++ C S +
Sbjct: 466 ATCAHPESLKGQSIFSVPPESFVCDDFLKPQIITQPETTMAMVGKDIRFTCSAASSSSSP 525
Query: 286 ISWYWN-GRLLLNNTAFSSYQRIFVIEQGEY-ERKSSLVLTNAQESDSGRFYCVAENRAG 343
+++ W +L N ++ + + GE E + L L GR+ CV N G
Sbjct: 526 MTFAWKKDNEVLTNADMENFVHVHA-QDGEVMEYTTILHLRQVTFGHEGRYQCVITNHFG 584
Score = 158 (60.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 44/156 (28%), Positives = 82/156 (52%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
LTQ LD++ N ++++ F+ GL +L+ L L R +I ++ GA GL+ + + L N
Sbjct: 213 LTQ-LDLNRNRIRLIEGLTFQ--GLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYN 269
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
L + S + + L L+L+ N I++I + + F L +L +S + L + E+
Sbjct: 270 SLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAE 329
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
SL ++L+ N +SH + + L L +++L N
Sbjct: 330 LSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHN 365
Score = 141 (54.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 39/133 (29%), Positives = 72/133 (54%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+VL + NN+ L AF GL + L L + +++SG+L GLT L ++ LS+N +
Sbjct: 238 EVLKLQRNNISKLTDGAFW--GLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSI 295
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
I + + L +L L+ N ++++++ + + L L +S + + HI+ AF G +
Sbjct: 296 ARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLR 355
Query: 172 SLESIKLNGNRLS 184
SL + L+ N +S
Sbjct: 356 SLRVLDLDHNEIS 368
Score = 122 (48.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD G L LP + LNL L+ +ID + L NL E+ L++N LT+
Sbjct: 52 LDCGGRGLAALPGDLPSWTRSLNLSYNKLS-----EIDPAGFEDLPNLQEVYLNNNELTA 106
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+PSL S + L L N I +E + L LD+S + + + F +
Sbjct: 107 VPSLGAASSHVV-SLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPI 165
Query: 174 ESIKLNGNRLSHFPVRSVEPLLK-LMMIELHDNPWVCDCNMRSIKM 218
+ + L GNR+ + + + L + L+ + L N + +R+ K+
Sbjct: 166 KELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNR-ITQLPVRAFKL 210
Score = 121 (47.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q + ++ N L +P A ++ LFL I ++ L +L +DLS N +
Sbjct: 95 QEVYLNNNELTAVPSLG---AASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNI 151
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP-GLVKLDMSESRLEHISPEAFTGA 170
T + + F +++LNLA N I +E GAF + L+ L +S++R+ + AF
Sbjct: 152 TEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFKLP 211
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L + LN NR+ + + L L +++L N
Sbjct: 212 R-LTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRN 245
Score = 116 (45.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/179 (24%), Positives = 87/179 (48%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGL 98
L +P + + V+ + + +I E + L+L+ L L+ +I ++ +
Sbjct: 104 LTAVPSLGAAS-SHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHG 162
Query: 99 TNLIEIDLSDNLLTSIPSLTFQSV-RFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES 157
+ E++L+ N + ++ F + R L L L++N I+++ AF+ +P L +LD++ +
Sbjct: 163 PPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFK-LPRLTQLDLNRN 221
Query: 158 RLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
R+ I F G SLE +KL N +S + L K+ ++ L N V + N S+
Sbjct: 222 RIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSL 279
Score = 113 (44.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 40/136 (29%), Positives = 61/136 (44%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
GL L +L L+ I +I L E+ LS N LT + + + L L L+
Sbjct: 281 GLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSH 340
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPE---AFTGAKSLESIKLNGNRLSHFPVR 189
N IS I +GAF+ + L LD+ + + + AF+G SL + L GN++ R
Sbjct: 341 NSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKR 400
Query: 190 SVEPLLKLMMIELHDN 205
+ L L + L N
Sbjct: 401 AFSGLEGLEHLNLGGN 416
Score = 65 (27.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 24/97 (24%), Positives = 38/97 (39%)
Query: 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYE 316
+ ++ R V E + C+ PP I+W+ R L S +R + +
Sbjct: 697 VPLEDRVVSV--GETVALQCKATGNPPPRITWFKGDRPL------SLTERHHLTPDNQL- 747
Query: 317 RKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
LV+ N D+GR+ C N G A+ L V
Sbjct: 748 ----LVVQNVVAEDAGRYTCEMSNTLGTERAHSQLSV 780
Score = 64 (27.6 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 323 LTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+T+ + D+G + C A+N AG AN TL V
Sbjct: 659 ITDVKIDDAGVYSCTAQNSAGSISANATLTV 689
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 249 (92.7 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 90/327 (27%), Positives = 149/327 (45%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++G NL +P +A GL NL+ + + ++ AL NL +DL+ N +
Sbjct: 217 LVIAGINLTEVPDDAL--VGLENLESISFYDNRLNKVPQVALQKAVNLKFLDLNKNPINR 274
Query: 114 IPSLTFQSVRFLRDLNLARNP-ISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAK 171
I F ++ L++L + P + I+ A +P L K++ + + RL +I P AF
Sbjct: 275 IRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLP 334
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVP-VQP 230
LES+ LN N LS ++E L L I +H NP CDC +R I M +K N+ ++P
Sbjct: 335 KLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINM---NKTNIRFMEP 391
Query: 231 A---CTGPERLSGKVFSDLHADDFA--CKPEIRMDS--RYVEAVSSENATVVCRVDSIPP 283
C P G+ +H D C P I +S ++ + ++ CR + P
Sbjct: 392 DSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSILDVEADSYVSLHCRATAEPQ 451
Query: 284 AAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRA 342
I W +G+ LL NT ++ +V +G +L + + G + C+A N
Sbjct: 452 PEIYWITPSGKRLLPNTL---REKFYVHSEG------TLDIRGITPKEGGLYTCIATNLV 502
Query: 343 GIADANFTLQVTYRGVGLPFLGGGHIN 369
G AD ++ + G +P G +N
Sbjct: 503 G-ADLK-SIMIKVGGF-VPQDNNGSLN 526
Score = 181 (68.8 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 51/160 (31%), Positives = 85/160 (53%)
Query: 49 ELTQVLD--MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
+++Q+L + N L LP++ GL NLQ+L++ + I GA GL NL+ + L
Sbjct: 114 KMSQLLSVYLEENKLTELPEKCLY--GLSNLQELYVNHNLLSAISPGAFVGLHNLLRLHL 171
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEA 166
+ N L I S F+++ L L L NPI +I+ FQ + L L ++ L + +A
Sbjct: 172 NSNRLQMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIAGINLTEVPDDA 231
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
G ++LESI NRL+ P +++ + L ++L+ NP
Sbjct: 232 LVGLENLESISFYDNRLNKVPQVALQKAVNLKFLDLNKNP 271
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 51/191 (26%), Positives = 94/191 (49%)
Query: 17 CPSTCICK---WKGGKQ-WME-----CRDKFLITIPEAPESELTQVLDMSGNNL-QILPK 66
CP C C+ W + +ME C D L+ P ++ TQ+L + NN+ +I
Sbjct: 29 CPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPAD-TQILLLQTNNIARIEHS 87
Query: 67 EAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLR 126
F +NL L L++ ++ + + + ++ L+ + L +N LT +P + L+
Sbjct: 88 TDFP----VNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQ 143
Query: 127 DLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF 186
+L + N +S I GAF + L++L ++ +RL+ I+ + F +LE + L N +
Sbjct: 144 ELYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRI 203
Query: 187 PVRSVEPLLKL 197
+ +PLLKL
Sbjct: 204 KDMNFQPLLKL 214
Score = 141 (54.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 47/152 (30%), Positives = 72/152 (47%)
Query: 56 MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115
M G+N IL + LL L+ L +A ++ ++ AL GL NL I DN L +P
Sbjct: 194 MLGDN-PILRIKDMNFQPLLKLRSLVIAGINLTEVPDDALVGLENLESISFYDNRLNKVP 252
Query: 116 SLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAKSLE 174
+ Q L+ L+L +NPI++I +G F + L +L ++ L I A L
Sbjct: 253 QVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLR 312
Query: 175 SIKLNGN-RLSHFPVRSVEPLLKLMMIELHDN 205
I+ N RLS+ + L KL + L+ N
Sbjct: 313 KIEATNNPRLSYIHPNAFFRLPKLESLMLNSN 344
Score = 140 (54.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 52/176 (29%), Positives = 82/176 (46%)
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
Q L L +I +I+ D NL +DLS N L+S+ ++ Q + L + L N +++
Sbjct: 72 QILLLQTNNIARIEHST-DFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTE 130
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKL 197
+ + + L +L ++ + L ISP AF G +L + LN NRL + E L L
Sbjct: 131 LPEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMINSKWFEALPNL 190
Query: 198 MMIELHDNPW--VCDCN------MRSIKMWLADKKNVPVQPACTGPERLSGKVFSD 245
++ L DNP + D N +RS+ + + VP A G E L F D
Sbjct: 191 EILMLGDNPILRIKDMNFQPLLKLRSLVIAGINLTEVP-DDALVGLENLESISFYD 245
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 238 (88.8 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 76/301 (25%), Positives = 140/301 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N++ + ++ + + L +L L+ ++ ++D +L L++L + LS N ++
Sbjct: 290 LHLSNNSISRIQRDGW--SFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISH 347
Query: 114 IPSLTFQSVRFLRDLNLARNPIS-KIE--KGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
I F+ ++ LR L+L N IS IE GAF + L KL + ++++ ++ AF+G
Sbjct: 348 IAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGL 407
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQ 229
+SLE + L N + + + L + + ++CDC ++ + WL + V
Sbjct: 408 ESLEHLNLGENAIRSVQFDAFAKMKNLKELYISSESFLCDCQLKWLPPWLMGRMLQAFVT 467
Query: 230 PACTGPERLSGK-VFSDLHADDFAC----KPEIRMDSRYVEAVSSENATVVCRVDSIPPA 284
C PE L G+ +FS L D F C KP+I AV ++ C S +
Sbjct: 468 ATCAHPESLKGQSIFSVL-PDSFVCDDFPKPQIITQPETTMAVVGKDIRFTCSAASSSSS 526
Query: 285 AISWYWN-GRLLLNNTAFSSYQRIFVIEQGEY-ERKSSLVLTNAQESDSGRFYCVAENRA 342
+++ W +L N ++ + + GE E + L L + GR+ C+ N
Sbjct: 527 PMTFAWKKDNEVLANADMENFAHVRA-QDGEVMEYTTILHLRHVTFGHEGRYQCIITNHF 585
Query: 343 G 343
G
Sbjct: 586 G 586
Score = 163 (62.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 45/156 (28%), Positives = 83/156 (53%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
LTQ LD++ N ++++ F+ GL +L+ L L R +I ++ GA GL+ + + L N
Sbjct: 215 LTQ-LDLNRNRIRLIEGLTFQ--GLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYN 271
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
L + S + + L L+L+ N IS+I++ + F L +L +S + L + E+
Sbjct: 272 SLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAE 331
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
SL ++L+ N +SH + + L L +++L N
Sbjct: 332 LSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHN 367
Score = 149 (57.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 51/170 (30%), Positives = 83/170 (48%)
Query: 39 LITIPEAPESELTQVLD--MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L I A +LT + + ++ N L +P G+++L FL I +D L
Sbjct: 82 LSEIDSAAFEDLTNLQEVYLNSNELTAIPSLGAASIGVVSL---FLQHNKILSVDGSQLK 138
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP-GLVKLDMS 155
+L +DLS N +T I S F + +R+LNLA N IS +E GAF + L+ L +S
Sbjct: 139 SYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLS 198
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
++R+ + +AF + L + LN NR+ + + L L ++ L N
Sbjct: 199 KNRITQLPVKAFKLPR-LTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRN 247
Score = 143 (55.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD SG L LP++ LNL + + +IDS A + LTNL E+ L+ N LT+
Sbjct: 54 LDCSGRGLATLPRDLPSWTRSLNL-----SYNRLSEIDSAAFEDLTNLQEVYLNSNELTA 108
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
IPSL S+ + L L N I ++ + L LD+S + + I F +
Sbjct: 109 IPSLGAASIGVV-SLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRI 167
Query: 174 ESIKLNGNRLSHFPVRSVEPLLK-LMMIELHDN 205
+ L NR+S + + L + L+ + L N
Sbjct: 168 RELNLASNRISILESGAFDGLSRSLLTLRLSKN 200
Score = 142 (55.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 40/133 (30%), Positives = 73/133 (54%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+VL + NN+ L AF GL + L L + +++SG+L GLT L ++ LS+N +
Sbjct: 240 EVLRLQRNNISRLTDGAFW--GLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSI 297
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
+ I + + L +L L+ N ++++++ + + L L +S + + HI+ AF G K
Sbjct: 298 SRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLK 357
Query: 172 SLESIKLNGNRLS 184
SL + L+ N +S
Sbjct: 358 SLRVLDLDHNEIS 370
Score = 134 (52.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 48/179 (26%), Positives = 88/179 (49%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGL 98
L IP + + V +N +IL + + L+L+ L L+ +I +I S
Sbjct: 106 LTAIPSLGAASIGVVSLFLQHN-KILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNG 164
Query: 99 TNLIEIDLSDNLLTSIPSLTFQSV-RFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES 157
+ E++L+ N ++ + S F + R L L L++N I+++ AF+ +P L +LD++ +
Sbjct: 165 LRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRN 223
Query: 158 RLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
R+ I F G SLE ++L N +S + L K+ ++ L N V + N S+
Sbjct: 224 RIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLV-EVNSGSL 281
Score = 63 (27.2 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 323 LTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+T+ + D G + C A+N AG AN TL V
Sbjct: 661 ITDVKIDDMGVYSCTAQNSAGSVSANATLTV 691
Score = 52 (23.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 23/97 (23%), Positives = 35/97 (36%)
Query: 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYE 316
+ ++ R V E C+ P I+W GR L S +R +
Sbjct: 699 VPLEDRVVTV--GETVAFQCKATGSPTPRITWLKGGRPL------SLTERHHFTPGNQL- 749
Query: 317 RKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
LV+ N D+GR+ C N G A+ L +
Sbjct: 750 ----LVVQNVMIDDAGRYTCEMSNPLGTERAHSQLSI 782
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 248 (92.4 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 82/333 (24%), Positives = 144/333 (43%)
Query: 36 DKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ I + +T ++D+ S N + + AF A L NL+ L L + +I +
Sbjct: 60 DNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAF--ADLRNLRALHLNSNRLTKITND 117
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLD 153
GL+NL + L++N LT I S F V L +L+L+ N + I A + + L L
Sbjct: 118 MFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLS 177
Query: 154 MSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP---------VRSVEPLLK--LMMIEL 202
+ + +++I F+ + + + N+L P V + ++ +
Sbjct: 178 LDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSF 237
Query: 203 HDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDS 261
NP C+C + +WL C P L+G+ F + ++F C+P I +
Sbjct: 238 GGNPLHCNCEL----LWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHT 293
Query: 262 RYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSS 320
+ + + AT+ C+ P AI W G+L+ N T R V + G +
Sbjct: 294 HEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNAT------RSLVYDNGTLD---- 343
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+++T + D+G F C+A N AG A L +
Sbjct: 344 ILITTVK--DTGAFTCIASNPAGEATQTMDLHI 374
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 52/189 (27%), Positives = 87/189 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C+ C K L+ +P + + L ++ N + + ++ F A + +
Sbjct: 20 CPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVE-LRLADNFVTNIKRKDF--ANMTS 76
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R I I A L NL + L+ N LT I + F + L L L N ++
Sbjct: 77 LVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLT 136
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
I AF V L +LD+S + LE I +A SL ++ L+ N + + P + L K
Sbjct: 137 LISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHK 196
Query: 197 LMMIELHDN 205
+ +++ N
Sbjct: 197 MTRLDVTSN 205
Score = 131 (51.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
+E+ L+DN +T+I F ++ L DL L+RN IS I AF + L L ++ +RL
Sbjct: 54 VELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTK 113
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN-----PW 207
I+ + F+G +L + LN N+L+ + + + L ++L N PW
Sbjct: 114 ITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPW 164
>ZFIN|ZDB-GENE-080723-63 [details] [associations]
symbol:zgc:195063 "zgc:195063" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080723-63
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG4THVT6
EMBL:BX510944 EMBL:BC163761 IPI:IPI00611152 RefSeq:NP_001122166.1
UniGene:Dr.110759 Ensembl:ENSDART00000077823 GeneID:558559
KEGG:dre:558559 OMA:PYLINIT NextBio:20882530 Uniprot:B3DK88
Length = 636
Score = 247 (92.0 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 89/347 (25%), Positives = 149/347 (42%)
Query: 17 CPSTCICKWKG-----GKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRR 71
CPS C C + G G + + C D + IP + T L + ++ +P EAF
Sbjct: 21 CPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNVPLD-TVKLRVEKTAVRRVPTEAFYY 79
Query: 72 AGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
L L+ L++ I +D G+ L L E+ L N++ + P + + + L+ L+L
Sbjct: 80 --LSELRYLWITYNSITSVDPGSFYNLKVLHELRLDGNMIATFPWESLKEMPSLKTLDLH 137
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV 191
N ++ + A ++ + LD+S ++L + + I+ + N ++V
Sbjct: 138 NNRLTSVPVEAAPYLINITYLDISSNKLTTLPSDLVDIWPPFSGIQPSANTSQ----KTV 193
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV----QP-ACTGPERLSGKVFSDL 246
+ L DNPW CDC + + + L+ +PV Q C+GPE LSG +F
Sbjct: 194 --------LGLQDNPWYCDCRISKL-IELSKMAGIPVVLMDQVLTCSGPEHLSGVLFQRA 244
Query: 247 HADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQR 306
D KP + + + + N + C + P + W ++NNT
Sbjct: 245 ELDQ-CVKPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLWTTADGSVVNNTVVQE--- 300
Query: 307 IFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
GE R S L L + D+G + C A+N AG A+A TL V
Sbjct: 301 ----SPGEGVRWSILSLHSIVFKDAGDYRCKAKNVAGNAEAYITLSV 343
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 246 (91.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 92/336 (27%), Positives = 154/336 (45%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L +IP S+L + L + + +LP AFRR L ++ L + ++S +L
Sbjct: 190 LTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQI-LHWSSLEMLNSNSLV 248
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
GL NL + L++ L++IP + + +L+ L+L+ NPI+ I+ + L +L +
Sbjct: 249 GL-NLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVG 307
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
L I P AF G + ++ NRLS + + L + L NP CDC +
Sbjct: 308 GNLLQIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPLACDCRL--- 364
Query: 217 KMW-LADKKNVPV---QPACTGPERLSGKVFSDLHADD----FACKPEIRMDSRYVEAVS 268
+W + ++ + QP C+ P K F D + F C+ + ++ +R ++ +S
Sbjct: 365 -LWVMRRRRRLDFDGRQPTCS-PLNHQRKAFRDFSEAELPVVFTCR-QAQILNRQLQDIS 421
Query: 269 SENATVV---CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
V C+ D P +I+W L +A SS R+ V+ G SL ++
Sbjct: 422 VIEGMRVHFDCKADGYPSPSITW-----LSAQQSALSSAGRVRVLTNG------SLQISY 470
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLP 361
AQ DSG + C A N AG N ++ V+ GLP
Sbjct: 471 AQVQDSGTYLCSAANAAG----NDSISVSLHVEGLP 502
Score = 186 (70.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + + + C + L +PE + + LD+SGN L+ L + F + L
Sbjct: 29 CPQRCSCS-RDPLE-VNCSSRHLTAVPEGLPTNAKR-LDLSGNQLKTLARRQF--SSLSK 83
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L+ I I+ GL NL + + +N L +P F + LR L+++ N I
Sbjct: 84 LEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEIL 143
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
F+ + L +LD E+ L IS AF G ++L+ + ++ + L+ P ++ L
Sbjct: 144 VFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQS 203
Query: 197 LMMIEL 202
L + L
Sbjct: 204 LTKLRL 209
Score = 148 (57.2 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 47/168 (27%), Positives = 84/168 (50%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L T+ S L+++ LD+S N + ++ E F+ GL NL+ L + + + G
Sbjct: 70 LKTLARRQFSSLSKLEDLDLSENIISMIEVETFQ--GLKNLRYLRIKNNRLKILPVGVFS 127
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
GL+NL +D+S+N + TF+ + L+ L+ N + I + AF + L +L++
Sbjct: 128 GLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDR 187
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIE-LH 203
S L I EA + +SL ++L +S P + L +L ++ LH
Sbjct: 188 SNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILH 235
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 48/180 (26%), Positives = 84/180 (46%)
Query: 30 QWMECRDKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHI 87
+++ ++ L +P S L+ + LD+S N + + FR ++NLQ+L +
Sbjct: 109 RYLRIKNNRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFR--DMINLQQLDAGENDL 166
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP 147
I A GL L E+++ + LTSIP+ ++ L L L + IS + AF+ +
Sbjct: 167 VFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLH 226
Query: 148 GLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L + S LE ++ + G +L ++ L LS P + L L ++L NP
Sbjct: 227 QLRTLQILHWSSLEMLNSNSLVGL-NLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNP 285
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 96 DGL-TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154
+GL TN +DLS N L ++ F S+ L DL+L+ N IS IE FQ + L L +
Sbjct: 54 EGLPTNAKRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRI 113
Query: 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
+RL+ + F+G +L + ++ N + F + ++ L ++ +N V
Sbjct: 114 KNNRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLV 167
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 247 (92.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 82/333 (24%), Positives = 144/333 (43%)
Query: 36 DKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ I + +T ++D+ S N + + AF A L NL+ L L + +I +
Sbjct: 60 DNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAF--ADLRNLRALHLNSNRLTKITND 117
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLD 153
GL+NL + L++N LT I S F V L +L+L+ N + I A + + L L
Sbjct: 118 MFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLS 177
Query: 154 MSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP---------VRSVEPLLK--LMMIEL 202
+ + +++I F+ + + + N+L P V + ++ +
Sbjct: 178 LDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSF 237
Query: 203 HDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDS 261
NP C+C + +WL C P L+G+ F + ++F C+P I +
Sbjct: 238 GGNPLHCNCEL----LWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHT 293
Query: 262 RYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSS 320
+ + + AT+ C+ P AI W G+L+ N T R V + G +
Sbjct: 294 HEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNAT------RSLVYDNGTLD---- 343
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+++T + D+G F C+A N AG A L +
Sbjct: 344 ILITTVK--DTGAFTCIASNPAGEATQTVDLHI 374
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 52/189 (27%), Positives = 87/189 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C+ C K L+ +P + + L ++ N + + ++ F A + +
Sbjct: 20 CPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVE-LRLADNFVTNIKRKDF--ANMTS 76
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R I I A L NL + L+ N LT I + F + L L L N ++
Sbjct: 77 LVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLT 136
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
I AF V L +LD+S + LE I +A SL ++ L+ N + + P + L K
Sbjct: 137 LISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHK 196
Query: 197 LMMIELHDN 205
+ +++ N
Sbjct: 197 MTRLDVTSN 205
Score = 131 (51.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
+E+ L+DN +T+I F ++ L DL L+RN IS I AF + L L ++ +RL
Sbjct: 54 VELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTK 113
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN-----PW 207
I+ + F+G +L + LN N+L+ + + + L ++L N PW
Sbjct: 114 ITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPW 164
>ZFIN|ZDB-GENE-040310-1 [details] [associations]
symbol:rtn4r "reticulon 4 receptor" species:7955
"Danio rerio" [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IGI;IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040310-1 GO:GO:0007411 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GO:GO:0048936 HOGENOM:HOG000116109 HOVERGEN:HBG063707
CTD:65078 EMBL:AY257178 IPI:IPI00490487 RefSeq:NP_982345.1
UniGene:Dr.30202 ProteinModelPortal:Q6X3Y5 SMR:Q6X3Y5 GeneID:403306
KEGG:dre:403306 InParanoid:Q6X3Y5 NextBio:20816915 Uniprot:Q6X3Y5
Length = 479
Score = 236 (88.1 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 63/203 (31%), Positives = 96/203 (47%)
Query: 49 ELTQVLDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
E + LD+ N NL+I+ AFR GL L L L RC + ++ G GL +L + L
Sbjct: 105 ERLEELDIGDNSNLRIISPTAFR--GLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQ 162
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF 167
DN L ++ TF + L L L N I + + + L +L + ++R+ H+ +AF
Sbjct: 163 DNNLLALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAF 222
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVP 227
L ++ L N L+ S+ PL+ L + L+ N W+CDC R + W K
Sbjct: 223 NDLSKLTTLFLFFNNLTMLTGESMNPLVSLQYLRLNGNQWICDCRARPLWDWFKRFKGSS 282
Query: 228 VQPACTGPERLSGKVFSDLHADD 250
C P L+GK L +DD
Sbjct: 283 SDLECHLPASLNGKDLKRLKSDD 305
Score = 168 (64.2 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 52/191 (27%), Positives = 95/191 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C+C + K + C+ + L +IP E P +Q + + N L ++ +F + +
Sbjct: 27 CPAKCVC-YSEPKATVACQQQGLFSIPTEIPVR--SQRIFLQSNKLTVVRSTSF--SSVH 81
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLT-FQSVRFLRDLNLARNP 134
NL L++ +I I++GA GL L E+D+ DN I S T F+ + L L+L R
Sbjct: 82 NLTVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAFRGLTKLHTLHLHRCG 141
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+S++ G F+ + L L + ++ L + + F +L + L+ N++ + L
Sbjct: 142 LSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGL 201
Query: 195 LKLMMIELHDN 205
+ L + LH N
Sbjct: 202 VNLDRLLLHQN 212
Score = 49 (22.3 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 430 ETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHSVINISNPDLI-NDTRKPEGLSPEP 487
+ SS K P PS +++ I+ N L K S + N+TR + L+ P
Sbjct: 350 DKSSIISSKSIPDPSSYNSRQIT-NNPLKEKENISKTKFREVERTKNETRNKQSLNDGP 407
>UNIPROTKB|F1RP63 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:CU466998 RefSeq:XP_003482968.1
Ensembl:ENSSSCT00000010401 GeneID:100153917 KEGG:ssc:100153917
Uniprot:F1RP63
Length = 842
Score = 246 (91.7 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 74/267 (27%), Positives = 125/267 (46%)
Query: 17 CPSTCICKWKGGKQWM-ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C CK + C+++ + ++ + P + + L ++GN + L K + A
Sbjct: 331 CPIPCNCKVLSPSGLLIHCQERNIESLSDLKPPPQNPRKLILAGNIIHTLMK--YDLAEY 388
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+ L L I ++ G+ LT L ++ L+ N LT + F + L L L N
Sbjct: 389 FTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNG 448
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
+ +I G F +P L L ++ + L+ + P F+G L I L N+ +H PV ++ +
Sbjct: 449 VKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILDD 507
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPVQPA-CTGPERLSGKVFSDLHADDF 251
L L I+L DNPW C C++ ++ W+ KN+ CT PE L K L+++
Sbjct: 508 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNIVTDEILCTSPEHLDKKELKALNSE-L 566
Query: 252 AC-----KPEIRMDSRYVEAVSSENAT 273
C P + + YV V++ AT
Sbjct: 567 LCPGLVNNPSLPTQTSYV-IVNTPTAT 592
Score = 243 (90.6 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 69/249 (27%), Positives = 116/249 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNLQILPKEAFRRAGL 74
C S C C+ K G + C +K + + + P S L + N L +L F +GL
Sbjct: 33 CDSLCNCEEKDGTMLINCEEKDIKKLSQISVPASRPFH-LSLLNNGLTMLHANDF--SGL 89
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
N + L +I I++GA +GL L ++ ++ N L + TF + L L N
Sbjct: 90 TNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILKEDTFHGLENLEFLQADNNF 149
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVEP 193
I+ IE AF + L L ++++ +E + P F L + L GN+L P V +E
Sbjct: 150 ITVIEPSAFSKLNRLKVLILNDNAIESLPPNVFRFVP-LTHLDLRGNQLQTLPYVGFLEH 208
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-----CTGPERLSGKVFSDLHA 248
+ +++ ++L DN W C+C++ +K+WL +N+P Q C P G + S L
Sbjct: 209 IGRILDLQLEDNKWACNCDLLQLKLWL---ENMPPQTVIGDVVCNSPPFFKGSILSRLKK 265
Query: 249 DDFACKPEI 257
+ P +
Sbjct: 266 ESICPTPPV 274
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 244 (91.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 81/325 (24%), Positives = 142/325 (43%)
Query: 36 DKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ I + +T ++D+ S N + + AF A L NL+ L L + +I +
Sbjct: 60 DNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAF--ADLRNLRALHLNSNRLTKITND 117
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLD 153
GL+NL + L++N LT I S F V L +L+L+ N + I A + + L L
Sbjct: 118 MFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLS 177
Query: 154 MSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP---------VRSVEPLLK--LMMIEL 202
+ + +++I F+ + + + N+L P V + ++ +
Sbjct: 178 LDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSF 237
Query: 203 HDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDS 261
NP C+C + +WL C P L+G+ F + ++F C+P I +
Sbjct: 238 GGNPLHCNCEL----LWLRRLSREDDLETCASPPLLTGRYFWSIPEEEFLCEPPLITRHT 293
Query: 262 RYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSS 320
+ + + AT+ C+ P AI W G+L+ N T R V + G +
Sbjct: 294 HEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNAT------RSLVYDNGTLD---- 343
Query: 321 LVLTNAQESDSGRFYCVAENRAGIA 345
+++T + D+G F C+A N AG A
Sbjct: 344 ILITTVK--DTGAFTCIASNPAGEA 366
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 52/189 (27%), Positives = 87/189 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C+ C K L+ +P + + L ++ N + + ++ F A + +
Sbjct: 20 CPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVE-LRLADNFVTNIKRKDF--ANMTS 76
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R I I A L NL + L+ N LT I + F + L L L N ++
Sbjct: 77 LVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLT 136
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
I AF V L +LD+S + LE I +A SL ++ L+ N + + P + L K
Sbjct: 137 LISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHK 196
Query: 197 LMMIELHDN 205
+ +++ N
Sbjct: 197 MTRLDVTSN 205
Score = 131 (51.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
+E+ L+DN +T+I F ++ L DL L+RN IS I AF + L L ++ +RL
Sbjct: 54 VELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTK 113
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN-----PW 207
I+ + F+G +L + LN N+L+ + + + L ++L N PW
Sbjct: 114 ITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPW 164
>UNIPROTKB|E2RFX7 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 OMA:YFELKAN EMBL:AAEX03013284
RefSeq:XP_003639854.1 Ensembl:ENSCAFT00000008522 GeneID:100856466
KEGG:cfa:100856466 NextBio:20859498 Uniprot:E2RFX7
Length = 840
Score = 245 (91.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 74/266 (27%), Positives = 121/266 (45%)
Query: 17 CPSTCICKWKGGKQWM-ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C CK + C+++ + ++ + P + + L ++GN + L K
Sbjct: 329 CPIPCNCKVLSPSGLLVHCQERNIESLSDLKPPPQNPRKLVLAGNIIHTLMKSDL--VEY 386
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+ L L I ++ G+ LT L ++ L+ N LT + F + L L L N
Sbjct: 387 FTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNA 446
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
+ +I G F +P L L ++ + L+ + P F+G SL I L N+ +H PV ++ +
Sbjct: 447 VKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGV-SLTRINLKTNQFTHLPVSNILDD 505
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLA--DKKNVPVQPACTGPERLSGK----VFSDLH 247
L L I+L DNPW C C++ ++ WL K V CT PE L K + S+L
Sbjct: 506 LDLLTQIDLEDNPWDCSCDLVGLQQWLQKLSKNTVTDDILCTSPEHLDKKELKALTSELL 565
Query: 248 ADDFACKPEIRMDSRYVEAVSSENAT 273
P + + Y+ VS+ T
Sbjct: 566 CPGLVNNPSLPTQASYI-IVSAPTTT 590
Score = 244 (91.0 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 70/249 (28%), Positives = 116/249 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNLQILPKEAFRRAGL 74
C S C C+ K G + C +K + + + P S L + N L +L F +GL
Sbjct: 31 CDSLCNCEEKDGTMLINCEEKGIKKLSQISVPPSRPFH-LSLLNNGLTMLHTNDF--SGL 87
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
N L L +I I++GA +GL L ++ ++ N L + TF + L L N
Sbjct: 88 TNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 147
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVEP 193
I+ IE AF + L L ++++ +E + P F L + L GN+L P V +E
Sbjct: 148 ITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 206
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-----CTGPERLSGKVFSDLHA 248
+ +++ ++L DN W C+C++ +K+WL +N+P Q C P G + S L
Sbjct: 207 IGRILDLQLEDNKWTCNCDLLELKIWL---ENMPPQSVIGDIVCNSPPFFKGSILSRLKK 263
Query: 249 DDFACKPEI 257
+ P +
Sbjct: 264 ESICPTPPV 272
>UNIPROTKB|F1MSM8 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:DAAA02033778 IPI:IPI00713179 RefSeq:XP_001249506.1
RefSeq:XP_002691956.1 UniGene:Bt.87936 Ensembl:ENSBTAT00000005757
GeneID:781119 KEGG:bta:781119 NextBio:20924630 Uniprot:F1MSM8
Length = 842
Score = 245 (91.3 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 69/249 (27%), Positives = 116/249 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNLQILPKEAFRRAGL 74
C S C C+ K G + C +K + + + P S L + N L +L F +GL
Sbjct: 33 CDSLCNCEEKDGTMLINCEEKGIKKLSQISVPPSRPFH-LSLLNNGLTVLHTNDF--SGL 89
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
N + L +I I++GA +GL L ++ ++ N L + TF + L L N
Sbjct: 90 TNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 149
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVEP 193
I+ IE AF + L L ++++ +E + P F L + L GN+L P V +E
Sbjct: 150 ITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 208
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-----CTGPERLSGKVFSDLHA 248
+ +++ ++L DN W C+C++ +K+WL +N+P Q C P G + S L
Sbjct: 209 IGRILDLQLEDNKWACNCDLLQLKLWL---ENMPPQSVIGDVVCNSPPFFKGSILSRLKK 265
Query: 249 DDFACKPEI 257
+ P +
Sbjct: 266 ESICPTPPV 274
Score = 237 (88.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 66/238 (27%), Positives = 112/238 (47%)
Query: 17 CPSTCICKWKGGKQWM-ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C CK + C+++ + ++ + P + + L ++GN + L K
Sbjct: 331 CPIPCNCKVLSPSGLLIHCQERNIESLSDLKPPPQNPRKLILAGNIIHTLLKSDL--VEY 388
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+ L L I ++ G+ LT L ++ L+ N LT + F + L L L N
Sbjct: 389 FTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNG 448
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
+ +I G F +P L L ++ + L+ + P F+G L I L N+ +H PV ++ +
Sbjct: 449 VKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILDD 507
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLA--DKKNVPVQPACTGPERLSGKVFSDLHAD 249
L L I+L DNPW C C++ ++ W+ K V + CT PE L K L+++
Sbjct: 508 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDEILCTSPEHLHKKELKALNSE 565
>UNIPROTKB|Q9P2V4 [details] [associations]
symbol:LRIT1 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 1" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISS] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030176 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 EMBL:AB031547 EMBL:AL080175 IPI:IPI00024059
PIR:T12497 RefSeq:NP_056428.1 UniGene:Hs.226000
ProteinModelPortal:Q9P2V4 SMR:Q9P2V4 PhosphoSite:Q9P2V4
DMDM:37081671 PaxDb:Q9P2V4 PRIDE:Q9P2V4 DNASU:26103
Ensembl:ENST00000372105 GeneID:26103 KEGG:hsa:26103 UCSC:uc001kcz.1
CTD:26103 GeneCards:GC10M085982 HGNC:HGNC:23404 HPA:HPA014296
neXtProt:NX_Q9P2V4 PharmGKB:PA162394331 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 InParanoid:Q9P2V4
OMA:RRINEYF OrthoDB:EOG42JNR2 PhylomeDB:Q9P2V4 GenomeRNAi:26103
NextBio:48099 Bgee:Q9P2V4 CleanEx:HS_LRIT1 Genevestigator:Q9P2V4
GermOnline:ENSG00000148602 Uniprot:Q9P2V4
Length = 623
Score = 247 (92.0 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 96/350 (27%), Positives = 150/350 (42%)
Query: 17 CPSTCICKWK----GGK-QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRR 71
CPS C C G K + + C D + T+P A T L + ++ +P EAFR
Sbjct: 23 CPSQCSCSLHIMGDGSKARTVVCNDPDM-TLPPASIPPDTSRLRLERTAIRRVPGEAFRP 81
Query: 72 AGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
G L++L+L + ++++ L GL L E+ L N L + P + LR L+L
Sbjct: 82 LG--RLEQLWLPYNALSELNALMLRGLRRLRELRLPGNRLAAFPWAALRDAPKLRLLDLQ 139
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLES-IKLNGNRLSHFPVRS 190
N +S + A +F+ L LD+S ++L + E LE+ I G H P R
Sbjct: 140 ANRLSAVPAEAARFLENLTFLDLSSNQLMRLPQELIVSWAHLETGIFPPG----HHPRR- 194
Query: 191 VEPLLKLMMIELHDNPWVCDCNMRSIKM----WLADKKNVPVQPACTGPERLSGKVFSDL 246
++ L DNPW CDC + + W + + + C P L+G FS L
Sbjct: 195 --------VLGLQDNPWACDCRLYDLVHLLDGWAPNLAFIETELRCASPRSLAGVAFSQL 246
Query: 247 HADDFACK-PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSY 304
C+ PE+ + ++ A + C +P +SW NGR L N T +
Sbjct: 247 ELRK--CQGPELHPGVASIRSLLGGTALLRCGATGVPGPEMSWRRANGRPL-NGTV---H 300
Query: 305 QRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
Q + + + L L DSG + C A+N G ++ +L VT
Sbjct: 301 QEV----SSDGTSWTLLGLPAVSHLDSGDYICQAKNFLGASETVISLIVT 346
Score = 38 (18.4 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 444 SYHSTEMISPNGQLPNKTLHSVI 466
+YHS ++ Q N T SV+
Sbjct: 440 TYHSVSLVWKAPQAKNTTAFSVL 462
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 246 (91.7 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 94/318 (29%), Positives = 141/318 (44%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARC-HIGQIDSGAL 95
L T+P ++L ++ + L I LP A R GL L++L + + +D G+L
Sbjct: 192 LSTVPGLALAQLPALVALRLRELDIERLPAGALR--GLGQLKELEIHHWPSLEALDPGSL 249
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL NL + ++ L+S+P + FLR L+L++NPIS I + L +L +S
Sbjct: 250 VGL-NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLS 308
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
+ L I+ AF G + + + N L + KL+ + L NP CDC +
Sbjct: 309 GACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRL-- 366
Query: 216 IKMWLAD-KKNVPV---QPACTGPERLSGKV---FSD-LHADDFACKPEIRMDS--RYVE 265
+WL ++ + PAC GP+ + GK FSD L F CKP + S R+V
Sbjct: 367 --LWLLRLRRRLDFGTSPPACAGPQHVQGKSLREFSDILPPGHFTCKPALIRKSGPRWVI 424
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A +A C D P +SW L R+ V+E G E +S
Sbjct: 425 AEEGGHAVFSCSGDGDPAPTVSWMRPQGAWLGRVG-----RVRVLEDGTLEIRS------ 473
Query: 326 AQESDSGRFYCVAENRAG 343
Q D G + CV N AG
Sbjct: 474 VQLRDRGAYVCVVSNVAG 491
Score = 182 (69.1 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 56/188 (29%), Positives = 91/188 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + + + C + L TIP + T++LD+SGN L L + R G
Sbjct: 31 CPTVCDCTSQ--TRAVFCAHRRLDTIPGGLPLD-TELLDLSGNRLWGLQRGMLSRLG--Q 85
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ+L L+ + ++ GA GL +L+ + L N L + F + L L+L N I
Sbjct: 86 LQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIV 145
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
GAF + L +L++ ++ L ++P AF G L +I L LS P ++ L
Sbjct: 146 LFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPA 205
Query: 197 LMMIELHD 204
L+ + L +
Sbjct: 206 LVALRLRE 213
Score = 38 (18.4 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 554 NNIHPNAKTLRVWQRGVPVLPPVNALK--RVLSRGSPDEGYQEGSG 597
+N+ N +LR W + V PP L + G P + + G
Sbjct: 487 SNVAGN-DSLRTWLEVIQVEPPNGTLSDPNITMPGIPGPFFLDSRG 531
>UNIPROTKB|Q9H5Y7 [details] [associations]
symbol:SLITRK6 "SLIT and NTRK-like protein 6" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 EMBL:CH471093
HOGENOM:HOG000290667 HOVERGEN:HBG056407 EMBL:AK021931 EMBL:AK026427
EMBL:AK292793 EMBL:AL137517 EMBL:BX648640 EMBL:AL162373
EMBL:BC101070 EMBL:BC101071 EMBL:BC101072 EMBL:BC101073
IPI:IPI00176398 PIR:T46279 RefSeq:NP_115605.2 UniGene:Hs.525105
ProteinModelPortal:Q9H5Y7 SMR:Q9H5Y7 STRING:Q9H5Y7
PhosphoSite:Q9H5Y7 DMDM:59803110 PaxDb:Q9H5Y7 PRIDE:Q9H5Y7
DNASU:84189 Ensembl:ENST00000400286 GeneID:84189 KEGG:hsa:84189
UCSC:uc001vll.1 CTD:84189 GeneCards:GC13M086366 HGNC:HGNC:23503
HPA:HPA014491 MIM:609681 neXtProt:NX_Q9H5Y7 PharmGKB:PA134928433
eggNOG:NOG113965 InParanoid:Q9H5Y7 OMA:YFELKAN OrthoDB:EOG4X0MRT
PhylomeDB:Q9H5Y7 GenomeRNAi:84189 NextBio:73578 Bgee:Q9H5Y7
CleanEx:HS_SLITRK6 Genevestigator:Q9H5Y7 GermOnline:ENSG00000184564
Uniprot:Q9H5Y7
Length = 841
Score = 242 (90.2 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 71/249 (28%), Positives = 114/249 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNLQILPKEAFRRAGL 74
C S C C+ K G + C K + + E P S Q L + N L +L F +GL
Sbjct: 31 CDSLCNCEEKDGTMLINCEAKGIKMVSEISVPPSRPFQ-LSLLNNGLTMLHTNDF--SGL 87
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
N + L +I I+ GA +GL L ++ ++ N L + TF + L L N
Sbjct: 88 TNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 147
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVEP 193
I+ IE AF + L L ++++ +E + P F L + L GN+L P V +E
Sbjct: 148 ITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 206
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQP-----ACTGPERLSGKVFSDLHA 248
+ +++ ++L DN W C+C++ +K WL +N+P Q C P G + S L
Sbjct: 207 IGRILDLQLEDNKWACNCDLLQLKTWL---ENMPPQSIIGDVVCNSPPFFKGSILSRLKK 263
Query: 249 DDFACKPEI 257
+ P +
Sbjct: 264 ESICPTPPV 272
Score = 232 (86.7 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 73/282 (25%), Positives = 126/282 (44%)
Query: 17 CPSTCICKWKGGKQWM-ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C CK + C+++ + ++ + P + + L ++GN + L K
Sbjct: 329 CPIPCNCKVLSPSGLLIHCQERNIESLSDLRPPPQNPRKLILAGNIIHSLMKSDL--VEY 386
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+ L L I ++ G+ LT L ++ L+ N LT + F + L L L N
Sbjct: 387 FTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNA 446
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
I +I G F +P L L ++ + L+ + P F+G L + L N+ +H PV ++ +
Sbjct: 447 IKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTKVNLKTNQFTHLPVSNILDD 505
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLA--DKKNVPVQPACTGPERLSGKVFSDLHADDF 251
L L I+L DNPW C C++ ++ W+ K V CT P L K L+++
Sbjct: 506 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDDILCTSPGHLDKKELKALNSE-I 564
Query: 252 AC-----KPEIRMDSRYV----EAVSSENATVVCR--VDSIP 282
C P + + Y+ A ++ A + R D++P
Sbjct: 565 LCPGLVNNPSMPTQTSYLMVTTPATTTNTADTILRSLTDAVP 606
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 245 (91.3 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 88/317 (27%), Positives = 140/317 (44%)
Query: 39 LITIPEAPESELTQVLDMSGN--NLQILPKEAFRRAGLLNLQKLFLARCHIGQ-IDSGAL 95
L ++P S L +L + N+ ++ +FRR L L+ L +A + + + + +L
Sbjct: 205 LTSVPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRR--LYRLKILEIANWPLLESLTAKSL 262
Query: 96 DGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS 155
GL N+ + +++ LT++P + Q + +LR NL+ NPI +E + L +
Sbjct: 263 HGL-NITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNPIEVVEGNKMHNLLRLQAFHLV 321
Query: 156 ESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
RL I P +F G L + ++ N LS + + L + LHDNP CDC +
Sbjct: 322 GGRLVSIEPYSFKGLNYLRVLNVSSNSLSTLEESAFHSVGNLETLALHDNPLACDCRLLW 381
Query: 216 I--KMWLADKKNVPVQPACTGPERLSGKVFSD----LHADDFAC-KPEIRMDSRYVEAVS 268
+ + W + QP+C PE L GK F D L + F C K +IR D + +
Sbjct: 382 VFRRRWRLNFNRQ--QPSCETPEFLQGKEFKDFPDVLPPNYFTCQKSKIR-DHKAIHRFV 438
Query: 269 SENATVV--CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA 326
E TV C+ D P I W + + S R+ V G E + A
Sbjct: 439 DEGTTVQFPCQADGDPTPMIMWQSPKKQFITT---KSIGRLSVSLDGTLE------VRYA 489
Query: 327 QESDSGRFYCVAENRAG 343
Q D+G + C A N G
Sbjct: 490 QIQDNGTYTCFAVNAGG 506
Score = 173 (66.0 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 63/220 (28%), Positives = 105/220 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + ++ + C + LIT+PE + T++LD+S N L+ + E F
Sbjct: 44 CPSRCECSAQ--ERSVVCHRRKLITLPEGIPID-TRLLDLSKNRLKAINPEEF--LNYPQ 98
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L I I+ GA L L + L +N L I F + L L+++ N I
Sbjct: 99 LEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIV 158
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ FQ + L +L++ ++ L IS AF G SLE + + L+ P + L
Sbjct: 159 ILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHN 218
Query: 197 LMMIEL-HDNPWVC-DCNMRSI-KMWLADKKNVPVQPACT 233
L+ ++L H N V D + R + ++ + + N P+ + T
Sbjct: 219 LLTLKLRHLNVNVIRDFSFRRLYRLKILEIANWPLLESLT 258
Score = 143 (55.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++ N + ++ AF + LL L+ L L ++ I G GL+NL +D+S+N +
Sbjct: 102 LQLNENIISVIEPGAF--SNLLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVI 159
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ FQ + L++L + N + I AF + L +L M L + EAF+ +L
Sbjct: 160 LLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNL 219
Query: 174 ESIKL---NGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
++KL N N + F R L +L ++E+ + P + +S+
Sbjct: 220 LTLKLRHLNVNVIRDFSFRR---LYRLKILEIANWPLLESLTAKSL 262
Score = 38 (18.4 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 452 SPNG-QLPNKTLHSVINISNPDLINDT 477
SPN PNKT ++N + + N T
Sbjct: 520 SPNWPHQPNKTFAFILNQPSDNSANGT 546
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 239 (89.2 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 91/328 (27%), Positives = 148/328 (45%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++G NL +P A GL NL+ + + ++ AL + NL +DL+ N +
Sbjct: 217 LVIAGINLTEIPDNAL--VGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINR 274
Query: 114 IPSLTFQSVRFLRDLNLARNP-ISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAK 171
I F ++ L++L + P + I+ A +P L K++ + + RL +I P AF
Sbjct: 275 IRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLP 334
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVP-VQP 230
LES+ LN N LS ++E L L I +H NP CDC +R + M +K N+ ++P
Sbjct: 335 KLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWMNM---NKTNIRFMEP 391
Query: 231 A---CTGPERLSGKVFSDLHADDFA--CKPEIRMDSRYVEAVSSENATVV---CRVDSIP 282
C P G+ +H D C P I +S + ++ E + V CR + P
Sbjct: 392 DSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPES-FPSNLNVEAGSYVSFHCRATAEP 450
Query: 283 PAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341
I W +G+ LL NT + +V +G +L + + G + C+A N
Sbjct: 451 QPEIYWITPSGQKLLPNTLTDKF---YVHSEG------TLDINGVTPKEGGLYTCIATNL 501
Query: 342 AGIADANFTLQVTYRGVGLPFLGGGHIN 369
G AD ++ + G P G +N
Sbjct: 502 VG-ADLK-SVMIKVDG-SFPQDNNGSLN 526
Score = 168 (64.2 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 49 ELTQVLD--MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
++ Q+L + N L LP++ L NLQ+L++ + I GA GL NL+ + L
Sbjct: 114 KMPQLLSVYLEENKLTELPEKCLSE--LSNLQELYINHNLLSTISPGAFIGLHNLLRLHL 171
Query: 107 SDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEA 166
+ N L I S F ++ L L + NPI +I+ F+ + L L ++ L I A
Sbjct: 172 NSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNA 231
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
G ++LESI NRL P +++ ++ L ++L+ NP
Sbjct: 232 LVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNP 271
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 55/220 (25%), Positives = 102/220 (46%)
Query: 17 CPSTCICK---WKGGKQ-WME-----CRDKFLITIPEAPESELTQVLDMSGNNLQILPKE 67
CP C C+ W + +ME C D L+T P + TQ+L + NN+ K
Sbjct: 29 CPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPAN-TQILLLQTNNIA---KI 84
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
+ +NL L L++ ++ + + + + L+ + L +N LT +P + L++
Sbjct: 85 EYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQE 144
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L + N +S I GAF + L++L ++ +RL+ I+ + F +LE + + N +
Sbjct: 145 LYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIK 204
Query: 188 VRSVEPLLKLMMI--------ELHDNPWVCDCNMRSIKMW 219
+ +PL+ L + E+ DN V N+ SI +
Sbjct: 205 DMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFY 244
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+NL+ L +A ++ +I AL GL NL I DN L +P + Q V L+ L+L +N
Sbjct: 211 LINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKN 270
Query: 134 PISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAKSLESIKLNGN-RLSHFPVRSV 191
PI++I +G F + L +L ++ L I A L I+ N RLS+ +
Sbjct: 271 PINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAF 330
Query: 192 EPLLKLMMIELHDN 205
L KL + L+ N
Sbjct: 331 FRLPKLESLMLNSN 344
>RGD|1306550 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] InterPro:IPR001611 PROSITE:PS51450 RGD:1306550
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099859 EMBL:CH473951 CTD:84189 OMA:YFELKAN
OrthoDB:EOG4X0MRT IPI:IPI00205859 RefSeq:NP_001099527.1
UniGene:Rn.99063 Ensembl:ENSRNOT00000038433 GeneID:290467
KEGG:rno:290467 UCSC:RGD:1306550 NextBio:631101 Uniprot:D3ZP44
Length = 840
Score = 239 (89.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 69/249 (27%), Positives = 115/249 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNLQILPKEAFRRAGL 74
C + C C+ K G + C +K + T+ + P S L + N L L F +GL
Sbjct: 31 CDTLCTCEEKDGIMIINCEEKGINTLSQISVPPSRPFH-LSLLNNGLTTLHTNDF--SGL 87
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
N + L +I I++GA +GL L ++ ++ N L + TF + L L N
Sbjct: 88 TNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 147
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVEP 193
I+ IE+ AF + L L ++++ +E + P F L + L GN+L P V +E
Sbjct: 148 ITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 206
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-----CTGPERLSGKVFSDLHA 248
+ +++ ++L DN W C+C + +K WL +N+P Q C P G + S L
Sbjct: 207 IGRILDLQLEDNKWACNCELLQLKNWL---ENMPPQSIIGDVICYSPPLFKGSILSRLKK 263
Query: 249 DDFACKPEI 257
+ P +
Sbjct: 264 ESICPTPPV 272
Score = 208 (78.3 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 64/239 (26%), Positives = 108/239 (45%)
Query: 17 CPSTCICKWKGGKQWM-ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C CK + C+++ + ++ + P + L ++GN + L K
Sbjct: 328 CPVPCNCKVLSPSGLLIHCQERNIESVSDLQPPPHNPRKLILAGNIIHTLMKADLM--DY 385
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+ L L I ++ G+ LT L ++ L+ N LT + F + L L L N
Sbjct: 386 FTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNA 445
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISP-EAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
+ +I G F +P L L ++ + L H+ P F G L + L N+ +H PV ++ +
Sbjct: 446 VKEILPGTFNPMPKLKVLYLNNNLL-HVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNILD 503
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWL--ADKKNVPVQPACTGPERLSGKVFSDLHAD 249
L L+ I+L DNPW C C++ ++ W+ K V C P L K L+++
Sbjct: 504 DLDLLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTVTDDILCASPGHLDKKELKALNSE 562
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 243 (90.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 93/317 (29%), Positives = 138/317 (43%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L T+P + L ++ + L I LP A R G L ++ L + +D G+L
Sbjct: 192 LSTVPGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPS-LEALDPGSLV 250
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
GL NL + ++ L+S+P + FLR L+L++NPIS I + L +L +S
Sbjct: 251 GL-NLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSG 309
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
+ L I+ AF G + + + N L + KL+ + L NP CDC +
Sbjct: 310 ACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRL--- 366
Query: 217 KMWLAD-KKNVPV---QPACTGPERLSGKV---FSD-LHADDFACKPEIRMDS--RYVEA 266
+WL ++++ PAC GP + GK FSD L F CKP + S R+V A
Sbjct: 367 -LWLLRLRRHLDFGMSPPACAGPHHVQGKSLKEFSDILPPGHFTCKPALIRKSGPRWVIA 425
Query: 267 VSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNA 326
+A C D P +SW L R+ V+E G E +S
Sbjct: 426 EEGGHAVFSCSGDGDPAPTVSWMRPHGAWLGRAG-----RVRVLEDGTLEIRS------V 474
Query: 327 QESDSGRFYCVAENRAG 343
Q D G + CV N AG
Sbjct: 475 QLRDRGAYVCVVSNVAG 491
Score = 174 (66.3 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 55/188 (29%), Positives = 90/188 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + Q + C + L +P + T++LD+SGN L L + R LL
Sbjct: 31 CPAVCDCTSQ--PQAVLCGHRQLEAVPGGLPLD-TELLDLSGNRLWGLQQGMLSRLSLL- 86
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
Q+L L+ + ++ GA GL +L+ + L N L + F + L L+L N I
Sbjct: 87 -QELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIV 145
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
GAF + L KL++ ++ L ++P AF G L ++ L LS P ++ L
Sbjct: 146 LFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPA 205
Query: 197 LMMIELHD 204
L+ + L +
Sbjct: 206 LVALRLRE 213
Score = 37 (18.1 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 554 NNIHPNAKTLRVWQRGVPVLPPVNALK--RVLSRGSPDEGYQEGSG 597
+N+ N +LR W + V PP L + G P + + G
Sbjct: 487 SNVAGN-DSLRTWLEVIQVEPPNGTLSDPNITVPGIPGPFFLDSRG 531
>UNIPROTKB|I3LT51 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 GO:GO:0048839 GeneTree:ENSGT00650000092962
EMBL:CU695170 EMBL:CU463987 EMBL:CU466536
Ensembl:ENSSSCT00000029371 OMA:YSTHILM Uniprot:I3LT51
Length = 210
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 51/150 (34%), Positives = 75/150 (50%)
Query: 56 MSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIP 115
+ N+L+ +P EA + L +LQ L L HI + GL +L + L DN LT IP
Sbjct: 2 LQNNHLRQVPTEALQN--LRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIP 59
Query: 116 SLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLES 175
F+S+ L+ + LA N I I AF + LV L + +R+ + + F G SLE+
Sbjct: 60 VQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLET 119
Query: 176 IKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ LN N L FP ++ L L + H N
Sbjct: 120 LDLNYNNLDEFPT-AIRTLSNLKELGFHSN 148
Score = 129 (50.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 31 WMECRDKFLITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIG 88
W++ D L IP L+ Q + ++ N + +P AF L +L L L I
Sbjct: 49 WLD--DNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAF--GNLSSLVVLHLHNNRIH 104
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
+ DGL +L +DL+ N L P+ +++ L++L N I I + AF P
Sbjct: 105 SLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIKSIPEKAFVGNPS 163
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNG-NRLSHFP 187
L+ + ++ ++ + AF L ++ LNG ++++ FP
Sbjct: 164 LITIHFYDNPIQLVGRSAFQHLPELRTLTLNGASQITEFP 203
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/155 (25%), Positives = 72/155 (46%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L + N++ +P F +GL +L+ L+L + +I A L+ L + L+ N +
Sbjct: 22 QSLRLDANHISYVPPSCF--SGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKI 79
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
IP F ++ L L+L N I + K F + L LD++ + L+ P A
Sbjct: 80 HHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEF-PTAIRTLS 138
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
+L+ + + N + P ++ L+ I +DNP
Sbjct: 139 NLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNP 173
Score = 42 (19.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 503 IRQPTN-SELGFDSNDKTPIIDGVSIGG-ELDDNYPPDYGLPIVGQGQNELLP 553
IR +N ELGF SN+ I + +G L + D + +VG+ + LP
Sbjct: 134 IRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLP 186
>UNIPROTKB|B3KTY4 [details] [associations]
symbol:SLITRK2 "cDNA FLJ38959 fis, clone NT2RI2000167,
highly similar to SLIT and NTRK-like protein 2" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL109653 IPI:IPI00410358
RefSeq:NP_001137478.1 RefSeq:NP_001137480.1 RefSeq:NP_001137481.1
RefSeq:NP_001137482.1 RefSeq:NP_115928.1 UniGene:Hs.320368
GeneID:84631 KEGG:hsa:84631 CTD:84631 HGNC:HGNC:13449
PharmGKB:PA134968225 ChiTaRS:SLITRK2 GenomeRNAi:84631 NextBio:74551
OrthoDB:EOG4GTKC9 EMBL:AK096278 EMBL:CH471175 SMR:B3KTY4
STRING:B3KTY4 Ensembl:ENST00000335565 Uniprot:B3KTY4
Length = 724
Score = 237 (88.5 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 68/238 (28%), Positives = 114/238 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CPS+C+C + + C+++ I + P+ + L ++GN LQ + K
Sbjct: 340 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS 399
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI-PSLTFQSVRFLRDLNLAR 132
L+L L L I I GA LT+L + L+ N L + PS+ F ++ L+ L L
Sbjct: 400 SLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSM-FDGLQSLQYLYLEY 456
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV- 191
N I +I+ F + L L ++ + L + P+ G +L + L N SH PV+ V
Sbjct: 457 NVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRNNHFSHLPVKGVL 515
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV---QPACTGPERLSGKVFSDL 246
+ L + I+L +NPW C C++ +K W + N PV + C P + +G++ L
Sbjct: 516 DQLPAFIQIDLQENPWDCTCDIMGLKDW-TEHANSPVIINEVTCESPAKHAGEILKFL 572
Score = 228 (85.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 76/250 (30%), Positives = 115/250 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP--EAPESELTQVLDMSGNNL-QILPKEAFRRAG 73
C C+C+ K + C +K T+ + P+ + Q+ ++GN L ++ P E +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPNEFVNYS- 86
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
N L L + +I +GA GL L + L++N L + TF + L L N
Sbjct: 87 --NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYN 144
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
IS IE GAF + L L ++++ L + F L + L GNRL P V E
Sbjct: 145 YISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFAGVLE 203
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-QPACTGPERLSGKVFSDLHADDF 251
+ +M I+L +NPW C C++ +K WL D V V + C P RL GK + L D
Sbjct: 204 HIGGIMEIQLEENPWNCTCDLLPLKAWL-DTITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Query: 252 ACKPEIRMDS 261
C + DS
Sbjct: 263 -CPRKSASDS 271
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 235 (87.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 77/306 (25%), Positives = 145/306 (47%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
+ ++L ++ NN+ ++ +A+ L++L L+ H+ +++ GL+ L ++L DN
Sbjct: 246 MLRILRVNQNNIGLIRADAWEFCH--RLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDN 303
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPIS-KIEKGAFQFVPGLVKLD---MSESRLEHISPE 165
++ + F S+ +R L++ N IS IE FV GL +L+ + +++ I+
Sbjct: 304 QISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGMFV-GLKRLNSLVLQNNKIRTITKR 362
Query: 166 AFTGAKSLESIKLNGNRL-SHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK 224
AF G LE++ L+ N + S P LKL ++L+ + +CDC ++ + WL + +
Sbjct: 363 AFEGLMELENLDLSKNGIMSIHPDAFTH--LKLKTLDLNSSSLLCDCQLQWLGQWLINSR 420
Query: 225 -NVPVQPACTGPERLSGKVFSDLHADDFAC----KPEIRMDSRYVEAVSSENATVVCRV- 278
C P L+G + ++F C KP+I + A+ N T+ C
Sbjct: 421 FQQSCTAVCAHPASLAGSSVLAVKPEEFVCSDFPKPQITAHPKTAVALRGTNVTLNCSAF 480
Query: 279 -DSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCV 337
S P + +W +G +L +Y R + ++ Y + L L N +D G++ CV
Sbjct: 481 SSSDSPMSTAWRKDGEVLYE-AQVQNYAR-YQDQRLLYT--TILHLLNVNFTDEGQYQCV 536
Query: 338 AENRAG 343
N G
Sbjct: 537 LSNHFG 542
Score = 165 (63.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 46/158 (29%), Positives = 80/158 (50%)
Query: 48 SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
S+L QVL++ N ++++ F+ L L+ L + R I ++ GAL GL N+ E++L
Sbjct: 173 SQL-QVLELRRNRIRVVESLIFKE--LKALKSLKMQRNGITKLMDGALFGLENMEELELE 229
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF 167
N LT + + LR L + +N I I A++F L +LD+S + L + F
Sbjct: 230 YNNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVF 289
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
G L+S+ L N++SH L + +++ +N
Sbjct: 290 AGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNN 327
Score = 158 (60.7 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 53/181 (29%), Positives = 91/181 (50%)
Query: 17 CPSTCICKW-KGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGL 74
CPS C C G Q ++C K L EAP + +T ++ N L +P F
Sbjct: 24 CPSPCSCSGGPGAAQLLDCNRKRLTAAALEAP-AWVTHA-SINQNELTAVP---FLGDAS 78
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
N+ L L I ++ + L ++L +DLS N ++ + + +F ++ L+ LNL++N
Sbjct: 79 SNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPMQ-LKYLNLSKNK 137
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
IS +E G F + L+ L ++++RL + + FT L+ ++L NR +R VE L
Sbjct: 138 ISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFT-LSQLQVLELRRNR-----IRVVESL 191
Query: 195 L 195
+
Sbjct: 192 I 192
Score = 140 (54.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 49 ELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
E + L++ NNL L K GL L+ L + + +IG I + A + L E+DLS
Sbjct: 221 ENMEELELEYNNLTELNKGWLY--GLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSF 278
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPE--- 165
N L+ + F + L+ LNL N IS + +G F + + LD+ + + +
Sbjct: 279 NHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIG 338
Query: 166 AFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
F G K L S+ L N++ R+ E L++L ++L N
Sbjct: 339 MFVGLKRLNSLVLQNNKIRTITKRAFEGLMELENLDLSKN 378
Score = 76 (31.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 272 ATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDS 331
A + C + P I+W +G + N + +R+ V+ + + + N + D
Sbjct: 574 ARLECAAEGHPTPQIAWQKDGGI---NFPAARERRMHVMPDDD-----TFFIANVKAEDM 625
Query: 332 GRFYCVAENRAGIADANFTLQV 353
G + C A+N AG AN TL V
Sbjct: 626 GVYSCTAKNEAGSLSANATLTV 647
Score = 53 (23.7 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
L++ +A +D+G++ C+ N G + L V+
Sbjct: 706 LIIVDAGPADAGKYTCIMSNTLGTERGHIYLSVS 739
>UNIPROTKB|Q13641 [details] [associations]
symbol:TPBG "Trophoblast glycoprotein" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=NAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005783 GO:GO:0005887 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 Pfam:PF01463 HOGENOM:HOG000013090
HOVERGEN:HBG053843 OrthoDB:EOG4SXNDB EMBL:Z29083 EMBL:AL121977
EMBL:AJ012159 EMBL:BC037161 IPI:IPI00009111 PIR:A53531
RefSeq:NP_001159864.1 RefSeq:NP_006661.1 UniGene:Hs.82128
ProteinModelPortal:Q13641 SMR:Q13641 IntAct:Q13641 MINT:MINT-230707
STRING:Q13641 PhosphoSite:Q13641 DMDM:73621980 PaxDb:Q13641
PeptideAtlas:Q13641 PRIDE:Q13641 Ensembl:ENST00000369750
Ensembl:ENST00000535040 Ensembl:ENST00000543496 GeneID:7162
KEGG:hsa:7162 UCSC:uc003pjn.4 CTD:7162 GeneCards:GC06P083072
HGNC:HGNC:12004 HPA:HPA010554 MIM:190920 neXtProt:NX_Q13641
PharmGKB:PA36685 eggNOG:NOG301461 InParanoid:Q13641 OMA:HNGTLAE
PhylomeDB:Q13641 GenomeRNAi:7162 NextBio:28026 ArrayExpress:Q13641
Bgee:Q13641 CleanEx:HS_TPBG Genevestigator:Q13641
GermOnline:ENSG00000146242 Uniprot:Q13641
Length = 420
Score = 164 (62.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 43/143 (30%), Positives = 70/143 (48%)
Query: 117 LTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESI 176
L ++++ LR L LA N + + +P L LD+S + L ++ +F LES+
Sbjct: 204 LAGRALQGLRRLELASNHFLYLPRDVLAQLPSLRHLDLSNNSLVSLTYVSFRNLTHLESL 263
Query: 177 KLNGNRLSHFPVRSVEPLLKLMMIE--LHDNPWVCDCNMRSIKMWLADKKNVPVQP--AC 232
L N L ++ L L I L +NPWVCDC+M + WL + + V + C
Sbjct: 264 HLEDNALKVLHNGTLAELQGLPHIRVFLDNNPWVCDCHMADMVTWLKETEVVQGKDRLTC 323
Query: 233 TGPERLSGKVFSDLHADDFACKP 255
PE++ +V +L++ D C P
Sbjct: 324 AYPEKMRNRVLLELNSADLDCDP 346
Score = 116 (45.9 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAF-RRAGL 74
CP+ C C + ++C ++ L +P + P + L ++GN L +LP AF RR L
Sbjct: 62 CPALCECS--EAARTVKCVNRNLTEVPTDLPA--YVRNLFLTGNQLAVLPAGAFARRPPL 117
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTF 119
L L L+ + ++ +GA + L +L ++DLS N L + F
Sbjct: 118 AELAALNLSGSRLDEVRAGAFEHLPSLRQLDLSHNPLADLSPFAF 162
>MGI|MGI:2443198 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2443198 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 HOGENOM:HOG000290667
HOVERGEN:HBG056407 CTD:84189 eggNOG:NOG113965 OMA:YFELKAN
OrthoDB:EOG4X0MRT EMBL:AB097575 EMBL:AK029275 IPI:IPI00223927
RefSeq:NP_780708.1 UniGene:Mm.49728 ProteinModelPortal:Q8C110
SMR:Q8C110 STRING:Q8C110 PhosphoSite:Q8C110 PRIDE:Q8C110
Ensembl:ENSMUST00000078386 GeneID:239250 KEGG:mmu:239250
InParanoid:Q8C110 NextBio:384048 Bgee:Q8C110 CleanEx:MM_SLITRK6
Genevestigator:Q8C110 GermOnline:ENSMUSG00000045871 Uniprot:Q8C110
Length = 840
Score = 237 (88.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 70/249 (28%), Positives = 115/249 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNLQILPKEAFRRAGL 74
C + C C+ K G + C +K + + + P S L + N L +L F +GL
Sbjct: 31 CDTLCNCEEKDGIMIINCEEKGINKLSQISVPPSRPFH-LSLLNNGLTMLHTNDF--SGL 87
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
N + L +I I++GA +GL L ++ ++ N L + TF + L L N
Sbjct: 88 TNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 147
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVEP 193
I+ IE AF + L L ++++ +E + P F L + L GN+L P V +E
Sbjct: 148 ITIIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 206
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-----CTGPERLSGKVFSDLHA 248
+ +++ ++L DN W C+C + +K WL +N+P Q C P G V S L
Sbjct: 207 IGRILDLQLEDNKWACNCELLQLKNWL---ENMPPQSIIGDVICYSPPPFKGSVLSRLKK 263
Query: 249 DDFACKPEI 257
+ F P +
Sbjct: 264 ESFCPTPPV 272
>UNIPROTKB|G3N2N1 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:DAAA02067944 RefSeq:XP_002699667.1
RefSeq:XP_591589.3 UniGene:Bt.78166 Ensembl:ENSBTAT00000057033
GeneID:540117 KEGG:bta:540117 NextBio:20878426 Uniprot:G3N2N1
Length = 844
Score = 237 (88.5 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 66/237 (27%), Positives = 112/237 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CPS+C+C + + C+++ I + P+ + L ++GN LQ++ K
Sbjct: 340 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQMVYKNDLLEYS 399
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I GA LT+L + L+ N L + F ++ L+ L L N
Sbjct: 400 SLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMFDGLQSLQYLYLEYN 457
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ F + L L ++ + L + P+ G +L + L N SH PV+ V +
Sbjct: 458 VIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRNNHFSHLPVKGVLD 516
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV---QPACTGPERLSGKVFSDL 246
L + I+L +NPW C C++ +K W + N PV + C P + +G++ L
Sbjct: 517 QLPAFIQIDLQENPWDCTCDIMGLKDW-TEHANSPVIINEVTCESPAKHAGEILKFL 572
Score = 226 (84.6 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 76/250 (30%), Positives = 115/250 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP--EAPESELTQVLDMSGNNL-QILPKEAFRRAG 73
C C+C+ K + C +K T+ + P+ + Q+ ++GN L ++ P E +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPNEFVNYS- 86
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
N L L + +I +GA GL L + L++N L + TF + L L N
Sbjct: 87 --NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYN 144
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
IS IE GAF + L L ++++ L + F L + L GNRL P V E
Sbjct: 145 YISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRGNRLKLMPFAGVLE 203
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-QPACTGPERLSGKVFSDLHADDF 251
+ +M I+L +NPW C C++ +K WL D V V + C P RL GK + L D
Sbjct: 204 HIGGIMEIQLEENPWNCTCDLLPLKAWL-DTITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Query: 252 ACKPEIRMDS 261
C + DS
Sbjct: 263 -CPRKSTGDS 271
>UNIPROTKB|Q9H156 [details] [associations]
symbol:SLITRK2 "SLIT and NTRK-like protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:Y19205 EMBL:AY358828 EMBL:AK091015
EMBL:AK289732 EMBL:AL109653 EMBL:BC113011 EMBL:BC113012
EMBL:AB058757 IPI:IPI00176104 IPI:IPI00410358 RefSeq:NP_001137475.1
RefSeq:NP_001137476.1 RefSeq:NP_001137477.1 RefSeq:NP_001137478.1
RefSeq:NP_001137480.1 RefSeq:NP_001137481.1 RefSeq:NP_001137482.1
RefSeq:NP_115928.1 UniGene:Hs.320368 ProteinModelPortal:Q9H156
SMR:Q9H156 STRING:Q9H156 PhosphoSite:Q9H156 DMDM:46397026
PaxDb:Q9H156 PRIDE:Q9H156 Ensembl:ENST00000370490
Ensembl:ENST00000413937 Ensembl:ENST00000428560
Ensembl:ENST00000434188 Ensembl:ENST00000447897 GeneID:84631
KEGG:hsa:84631 UCSC:uc004fcd.3 CTD:84631 GeneCards:GC0XP144900
H-InvDB:HIX0017096 H-InvDB:HIX0176721 HGNC:HGNC:13449 HPA:HPA051847
MIM:300561 neXtProt:NX_Q9H156 PharmGKB:PA134968225 eggNOG:NOG147171
InParanoid:Q9H156 OMA:LQADYNY PhylomeDB:Q9H156 ChiTaRS:SLITRK2
GenomeRNAi:84631 NextBio:74551 ArrayExpress:Q9H156 Bgee:Q9H156
CleanEx:HS_SLITRK2 Genevestigator:Q9H156 GermOnline:ENSG00000185985
Uniprot:Q9H156
Length = 845
Score = 237 (88.5 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 68/238 (28%), Positives = 114/238 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CPS+C+C + + C+++ I + P+ + L ++GN LQ + K
Sbjct: 340 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS 399
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI-PSLTFQSVRFLRDLNLAR 132
L+L L L I I GA LT+L + L+ N L + PS+ F ++ L+ L L
Sbjct: 400 SLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSM-FDGLQSLQYLYLEY 456
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV- 191
N I +I+ F + L L ++ + L + P+ G +L + L N SH PV+ V
Sbjct: 457 NVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRNNHFSHLPVKGVL 515
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV---QPACTGPERLSGKVFSDL 246
+ L + I+L +NPW C C++ +K W + N PV + C P + +G++ L
Sbjct: 516 DQLPAFIQIDLQENPWDCTCDIMGLKDW-TEHANSPVIINEVTCESPAKHAGEILKFL 572
Score = 228 (85.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 76/250 (30%), Positives = 115/250 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP--EAPESELTQVLDMSGNNL-QILPKEAFRRAG 73
C C+C+ K + C +K T+ + P+ + Q+ ++GN L ++ P E +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPNEFVNYS- 86
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
N L L + +I +GA GL L + L++N L + TF + L L N
Sbjct: 87 --NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYN 144
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
IS IE GAF + L L ++++ L + F L + L GNRL P V E
Sbjct: 145 YISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFAGVLE 203
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-QPACTGPERLSGKVFSDLHADDF 251
+ +M I+L +NPW C C++ +K WL D V V + C P RL GK + L D
Sbjct: 204 HIGGIMEIQLEENPWNCTCDLLPLKAWL-DTITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Query: 252 ACKPEIRMDS 261
C + DS
Sbjct: 263 -CPRKSASDS 271
>MGI|MGI:2679449 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2679449 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:84631 eggNOG:NOG147171
EMBL:AB097571 EMBL:AK044761 IPI:IPI00329847 RefSeq:NP_001154903.1
RefSeq:NP_942563.2 UniGene:Mm.336081 UniGene:Mm.403134
ProteinModelPortal:Q810C0 SMR:Q810C0 STRING:Q810C0
PhosphoSite:Q810C0 PaxDb:Q810C0 PRIDE:Q810C0
Ensembl:ENSMUST00000036043 Ensembl:ENSMUST00000166241 GeneID:245450
KEGG:mmu:245450 InParanoid:Q810C0 OrthoDB:EOG4GTKC9 NextBio:386711
Bgee:Q810C0 CleanEx:MM_SLITRK2 Genevestigator:Q810C0
GermOnline:ENSMUSG00000036790 Uniprot:Q810C0
Length = 846
Score = 237 (88.5 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 68/238 (28%), Positives = 114/238 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CPS+C+C + + C+++ I + P+ + L ++GN LQ + K
Sbjct: 341 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS 400
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI-PSLTFQSVRFLRDLNLAR 132
L+L L L I I GA LT+L + L+ N L + PS+ F ++ L+ L L
Sbjct: 401 SLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSM-FDGLQSLQYLYLEY 457
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV- 191
N I +I+ F + L L ++ + L + P+ G +L + L N SH PV+ V
Sbjct: 458 NVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRNNHFSHLPVKGVL 516
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV---QPACTGPERLSGKVFSDL 246
+ L + I+L +NPW C C++ +K W + N PV + C P + +G++ L
Sbjct: 517 DQLPAFIQIDLQENPWDCTCDIMGLKDW-TEHANSPVIINEVTCESPAKHAGEILKFL 573
Score = 225 (84.3 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 75/250 (30%), Positives = 113/250 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP--EAPESELTQVLDMSGNNL-QILPKEAFRRAG 73
C C+C+ K + C +K T+ + P+ + Q+ ++GN L ++ P E +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPNEFVNYS- 86
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
N L L + +I GA GL L + L++N L + TF + L L N
Sbjct: 87 --NAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYN 144
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
IS IE GAF + L L ++++ L + F L + L GNRL P V E
Sbjct: 145 YISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFAGVLE 203
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-QPACTGPERLSGKVFSDLHADDF 251
+ +M I+L +NPW C C++ +K WL D V V + C P RL GK + L D
Sbjct: 204 HIGGIMEIQLEENPWNCTCDLLPLKAWL-DTITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Query: 252 ACKPEIRMDS 261
+ DS
Sbjct: 263 CPRKSASGDS 272
>UNIPROTKB|Q3SXY7 [details] [associations]
symbol:LRIT3 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
EMBL:CH471057 InterPro:IPR013098 Pfam:PF07679 EMBL:AC005509
eggNOG:NOG310852 HOGENOM:HOG000063714 HOVERGEN:HBG108105
EMBL:AK126648 EMBL:BC104037 IPI:IPI00394850 IPI:IPI00746317
RefSeq:NP_940908.3 UniGene:Hs.308127 ProteinModelPortal:Q3SXY7
SMR:Q3SXY7 PhosphoSite:Q3SXY7 DMDM:269849616 PRIDE:Q3SXY7
Ensembl:ENST00000327908 Ensembl:ENST00000379920
Ensembl:ENST00000409621 GeneID:345193 KEGG:hsa:345193
UCSC:uc003hzw.4 UCSC:uc003hzx.4 CTD:345193 GeneCards:GC04P110772
HGNC:HGNC:24783 HPA:HPA013454 neXtProt:NX_Q3SXY7
PharmGKB:PA162394355 InParanoid:Q3SXY7 OMA:RTGDHPE
OrthoDB:EOG4THVT6 GenomeRNAi:345193 NextBio:98830 Bgee:Q3SXY7
CleanEx:HS_LRIT3 Genevestigator:Q3SXY7 Uniprot:Q3SXY7
Length = 634
Score = 239 (89.2 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 77/284 (27%), Positives = 127/284 (44%)
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+ LQ L++ + ID + L L E+ L N L + P + + LR L+L N
Sbjct: 35 LVELQYLWVTYNSVASIDPSSFYNLKQLHELRLDGNSLAAFPWASLLDMPLLRTLDLHNN 94
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I+ + A +++ L LD+S +RL + P+ L S LS P R
Sbjct: 95 KITSVPNEALRYLKNLAYLDLSSNRLTTLPPDFLESWTHLVSTPSGVLDLS--PSR---- 148
Query: 194 LLKLMMIELHDNPWVCDCNM-RSIKMW-LADKKNVPVQP--ACTGPERLSGKVFSDLHAD 249
+++ L DNPW CDC++ + I++ + D V + P C+ PERL+G +F +
Sbjct: 149 ----IILGLQDNPWFCDCHISKMIELSKVVDPAIVLLDPLMTCSEPERLTGILFQRAELE 204
Query: 250 DFACKPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFV 309
KP + + + + N + C P I+W + +N T
Sbjct: 205 H-CLKPSVMTSATKIMSALGSNVLLRCDATGFPTPQITWTRSDSSPVNYTVIQESP---- 259
Query: 310 IEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
E+G R S + LT D+G + C A+N AG+++A T+ V
Sbjct: 260 -EEGV--RWSIMSLTGISSKDAGDYKCKAKNLAGMSEAVVTVTV 300
Score = 40 (19.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 426 TPVIETSSFTERKQFPPPSYHSTEMISP 453
T V SS+ F P S S +SP
Sbjct: 332 TSVSSASSYLWSSSFSPTSSFSASTLSP 359
Score = 38 (18.4 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 439 QFPPPSYHSTEMISPNGQLPNKTLHSVIN--ISNPDLINDTRKPEGLS----PEPHNDDV 492
+ PP S E ++ L ++T+ + N I N ++++T++ L+ HN V
Sbjct: 415 KLPPASTSKKEELA----LLDQTMLTETNAAIENLRVVSETKESVTLTWNMINTTHNSAV 470
Query: 493 -LFQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGE 530
+ + Y +++ L DS+ IDG+ GG+
Sbjct: 471 TVLYSKYGGKDLLL-----LNADSSKNQVTIDGLEPGGQ 504
>UNIPROTKB|F1RQ61 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:FP236785 RefSeq:XP_003135487.1
Ensembl:ENSSSCT00000013911 Ensembl:ENSSSCT00000034054
Ensembl:ENSSSCT00000034972 Ensembl:ENSSSCT00000035609
GeneID:100511615 KEGG:ssc:100511615 Uniprot:F1RQ61
Length = 849
Score = 236 (88.1 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 66/237 (27%), Positives = 111/237 (46%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CPS+C+C + + C+++ I + P+ + L ++GN LQ + K
Sbjct: 344 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS 403
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I GA LT+L + L+ N L + F ++ L+ L L N
Sbjct: 404 SLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMFDGLQSLQYLYLEYN 461
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ F + L L ++ + L + P+ G +L + L N SH PV+ V +
Sbjct: 462 VIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRNNHFSHLPVKGVLD 520
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV---QPACTGPERLSGKVFSDL 246
L + I+L +NPW C C++ +K W + N PV + C P + +G++ L
Sbjct: 521 QLPAFIQIDLQENPWDCTCDIMGLKDW-TEHANSPVIINEVTCESPAKHAGEILKFL 576
Score = 224 (83.9 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 73/239 (30%), Positives = 111/239 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP--EAPESELTQVLDMSGNNL-QILPKEAFRRAG 73
C C+C+ K + C +K T+ + P+ + Q+ ++GN L ++ P E +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPNEFVNYS- 86
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
N L L + +I +GA GL L + L++N L + TF + L L N
Sbjct: 87 --NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYN 144
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
IS IE GAF + L L ++++ L + F L + L GNRL P V E
Sbjct: 145 YISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFAGVLE 203
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-QPACTGPERLSGKVFSDLHADD 250
+ +M I+L +NPW C C++ +K WL D V V + C P RL GK + L D
Sbjct: 204 HIGGIMEIQLEENPWNCTCDLLPLKAWL-DTITVFVGEIVCETPFRLHGKDVTQLTRQD 261
>ZFIN|ZDB-GENE-040426-1227 [details] [associations]
symbol:mb21d2b "Mab-21 domain containing 2b"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-040426-1227
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00660000095307 EMBL:CABZ01031876
EMBL:CABZ01031877 EMBL:CABZ01072581 EMBL:CU499339 IPI:IPI00995611
Ensembl:ENSDART00000124704 Uniprot:E7EZ70
Length = 742
Score = 235 (87.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 88/352 (25%), Positives = 149/352 (42%)
Query: 36 DKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + +T + L +S N + + AF GL +L+ L + + I+S
Sbjct: 60 DNFITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAFM--GLKSLRALHMDGNRLSVINSN 117
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
L GL NL + L +N + I +F V + DL+L+ N + + A + + L
Sbjct: 118 QLKGLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTL 177
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV--------EPLLKL---MMIE 201
+ + ++HI FT L + + NRL P ++ EP + +
Sbjct: 178 TLDHNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTLFQHAQVLSEPKTSSSSRLTVS 237
Query: 202 LHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMDS 261
NP C+C + +WL C PE L K F + ++F C+P +
Sbjct: 238 FGGNPLHCNCEL----LWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKH 293
Query: 262 RYVE--AVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERK 318
+ + + + T+ C+ P AI W + +G+L+ NN+ R + + G +
Sbjct: 294 QVTKPYVMEGQGVTLKCKAMGDPDPAIHWRFPDGKLVHNNS------RTILYDNGTLD-- 345
Query: 319 SSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFL--GGGHI 368
+++T + DSG F CVA N AGIA T V + LP L GH+
Sbjct: 346 --ILITTLK--DSGAFNCVASNAAGIA----TAAVHVHMIPLPLLVNNTGHM 389
Score = 167 (63.8 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 51/190 (26%), Positives = 91/190 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP CIC+ + C L+ +P + + + L ++ N + + ++ F + +
Sbjct: 20 CPGRCICQTISPTLTLLCAKTGLLFVPPTVDRKTVE-LRLTDNFITAVRRKDF--LNMTS 76
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R I QI A GL +L + + N L+ I S + + LR L L N I
Sbjct: 77 LVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVINSNQLKGLMNLRHLILGNNQIH 136
Query: 137 KIEKGAF-QFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
IE+ +F +FV + LD+S + L + EA ++ ++ L+ N + H V + L
Sbjct: 137 HIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTLTLDHNLIDHIGVGTFTLLT 196
Query: 196 KLMMIELHDN 205
KL+ +++ N
Sbjct: 197 KLVRLDMTSN 206
>RGD|1561361 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1561361 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:LQADYNY OrthoDB:EOG4GTKC9
IPI:IPI00361290 Ensembl:ENSRNOT00000015401 Uniprot:D3ZK41
Length = 846
Score = 235 (87.8 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 68/238 (28%), Positives = 114/238 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CPS+C+C + + C+++ I + P+ + L ++GN LQ + K
Sbjct: 341 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYT 400
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI-PSLTFQSVRFLRDLNLAR 132
L+L L L I I GA LT+L + L+ N L + PS+ F ++ L+ L L
Sbjct: 401 SLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSM-FDGLQSLQYLYLEY 457
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV- 191
N I +I+ F + L L ++ + L + P+ G +L + L N SH PV+ V
Sbjct: 458 NVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRNNHFSHLPVKGVL 516
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV---QPACTGPERLSGKVFSDL 246
+ L + I+L +NPW C C++ +K W + N PV + C P + +G++ L
Sbjct: 517 DQLPAFIQIDLQENPWDCTCDIMGLKDW-TEHANSPVIINEVTCESPAKHAGEILKFL 573
Score = 226 (84.6 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 82/274 (29%), Positives = 124/274 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP--EAPESELTQVLDMSGNNL-QILPKEAFRRAG 73
C C+C+ K + C +K T+ + P+ + Q+ ++GN L ++ P E +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPNEFVNYS- 86
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
N L L + +I GA GL L + L++N L + TF + L L N
Sbjct: 87 --NAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYN 144
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
IS IE GAF + L L ++++ L + F L + L GNRL P V E
Sbjct: 145 YISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFAGVLE 203
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-QPACTGPERLSGKVFSDLHADDF 251
+ +M I+L +NPW C C++ +K WL D V V + C P RL GK + L D
Sbjct: 204 HIGGIMEIQLEENPWNCTCDLLPLKAWL-DTITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Query: 252 ACKPEIRMDSRYVEAVSSENATVVCRVD-SIPPA 284
+ DS SS + T V R+ ++ PA
Sbjct: 263 CPRKSASGDS---SQRSSHSDTHVQRLSPTMNPA 293
>ZFIN|ZDB-GENE-030131-1988 [details] [associations]
symbol:flrt3 "fibronectin leucine rich
transmembrane 3" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030131-1988 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000290188 HOVERGEN:HBG051629 KO:K16362
CTD:23767 OMA:SPYRVCM GeneTree:ENSGT00700000104442 EMBL:BX465200
IPI:IPI00876770 RefSeq:NP_001243575.1 UniGene:Dr.105122
Ensembl:ENSDART00000112985 Ensembl:ENSDART00000143703 GeneID:558864
KEGG:dre:558864 NextBio:20882668 Uniprot:B8A507
Length = 649
Score = 233 (87.1 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 70/249 (28%), Positives = 121/249 (48%)
Query: 47 ESELTQVLDMSGNNLQILPKEAFRRAGL-LNLQKLFLARCHIGQIDSGALDGLTNLIEID 105
+S ++L +S N+L +P +GL + +++L I I +L L NL +
Sbjct: 152 DSNHLRLLFLSRNHLSTIP------SGLPMTIEELRFDDNRISSISEASLQDLINLKRLV 205
Query: 106 LSDNLLTS--IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG--LVKLDMSESRLEH 161
L NLL + I + ++ L +L+L RN ++ +PG L KL++ ++ + H
Sbjct: 206 LDGNLLNNRGIGEMALVNLVNLTELSLVRNSLTSPPAN----LPGSSLEKLNLQDNHINH 261
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLA 221
+ P AF + L + L+GN LS P+ E L L + L +NPW C+C M+ ++ WL
Sbjct: 262 VPPGAFAFLRQLYRLDLSGNNLSSLPMGVFEDLDNLTQLLLRNNPWHCNCRMKWVRDWLR 321
Query: 222 D-KKNVPVQP-ACTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVD 279
V V+ C GP+++ G DL + F C + + + Y E +TV +
Sbjct: 322 TLPSKVNVRGFMCQGPDKVKGMAIKDLSTELFGCS-DTEIPTTY------ETSTVS---N 371
Query: 280 SIPPAAISW 288
++PP+ W
Sbjct: 372 TLPPSRPQW 380
Score = 145 (56.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 66/244 (27%), Positives = 114/244 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGL 74
CPS C C G ++ C D+ L +IP + T VL + N ++ +P + RR L
Sbjct: 31 CPSQCRCD--G--TFIYCNDRDLTSIPSGIPEDAT-VLFLQNNRIKSAGIPTD-LRR--L 82
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
++K++L C+ +D + N+ E+ L +N + +I + + F+ +L+L N
Sbjct: 83 NGVEKIYLY-CN--NLDEFPTNLPLNVKELHLQENNIRTITHASLAQIPFIEELHLDDNS 139
Query: 135 IS--KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
+S IE+GAF+ L L +S + L I P ++E ++ + NR+S S++
Sbjct: 140 VSAVSIEEGAFRDSNHLRLLFLSRNHLSTI-PSGLP--MTIEELRFDDNRISSISEASLQ 196
Query: 193 PLLKLMMIELHDNPWVCDCNMRSI-KMWLADKKNVP----VQPACTGPE-RLSGKVFSDL 246
L+ L + L N N R I +M L + N+ V+ + T P L G L
Sbjct: 197 DLINLKRLVLDGNL----LNNRGIGEMALVNLVNLTELSLVRNSLTSPPANLPGSSLEKL 252
Query: 247 HADD 250
+ D
Sbjct: 253 NLQD 256
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 480 PEGLSPEPHN-DDVLFQNNYWNQNIR 504
P G+ + N +L +NN W+ N R
Sbjct: 287 PMGVFEDLDNLTQLLLRNNPWHCNCR 312
>UNIPROTKB|Q9NR99 [details] [associations]
symbol:MXRA5 "Matrix-remodeling-associated protein 5"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:Q9BZR6 eggNOG:NOG239806 EMBL:AF245505 EMBL:AC004616
EMBL:BC011846 EMBL:BC064986 EMBL:BC080586 EMBL:AL049946
IPI:IPI00012347 PIR:T08678 RefSeq:NP_056234.2 UniGene:Hs.369422
ProteinModelPortal:Q9NR99 STRING:Q9NR99 PhosphoSite:Q9NR99
DMDM:117949607 PaxDb:Q9NR99 PRIDE:Q9NR99 Ensembl:ENST00000217939
Ensembl:ENST00000381114 GeneID:25878 KEGG:hsa:25878 UCSC:uc004crg.4
CTD:25878 GeneCards:GC0XM003220 H-InvDB:HIX0016637 HGNC:HGNC:7539
HPA:HPA000508 neXtProt:NX_Q9NR99 PharmGKB:PA31340
HOGENOM:HOG000168306 InParanoid:Q9NR99 OMA:GALMTPN
OrthoDB:EOG4B5P48 PhylomeDB:Q9NR99 GenomeRNAi:25878 NextBio:47288
Bgee:Q9NR99 CleanEx:HS_MXRA5 Genevestigator:Q9NR99
GermOnline:ENSG00000101825 Uniprot:Q9NR99
Length = 2828
Score = 179 (68.1 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 61/218 (27%), Positives = 98/218 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C + L ++P + ++ ++ N++Q L + +F AGL
Sbjct: 27 CPHPCACYVPSE---VHCTFRSLASVPAGIAKHVERI-NLGFNSIQALSETSF--AGLTK 80
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L + I I GAL L++L S N L I T Q + L L++ N I
Sbjct: 81 LELLMIHGNEIPSIPDGALRDLSSLQVFKFSYNKLRVITGQTLQGLSNLMRLHIDHNKIE 140
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNR---LSHFPVRSVEP 193
I AF + L L + + L + P F+ L+ +L+ R L+ VR++
Sbjct: 141 FIHPQAFNGLTSLRLLHLEGNLLHQLHPSTFSTFTFLDYFRLSTIRHLYLAENMVRTLPA 200
Query: 194 -LLKLM-MIE---LHDNPWVCDCNMRSIKMWLADKKNV 226
+L+ M ++E L NPW CDC MR W A + +
Sbjct: 201 SMLRNMPLLENLYLQGNPWTCDCEMRWFLEWDAKSRGI 238
Score = 122 (48.0 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 34/94 (36%), Positives = 54/94 (57%)
Query: 270 ENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQES 329
E+ T+ C +IP A +SW R ++N+ A +S+ ++++ G +L + Q S
Sbjct: 593 ESVTLPCNALAIPEAHLSWILPNRRIINDLANTSH--VYMLPNG------TLSIPKVQVS 644
Query: 330 DSGRFYCVAENRAGIADANFT--LQVTYRGVGLP 361
DSG + CVA N+ G AD +FT + VT +G GLP
Sbjct: 645 DSGYYRCVAVNQQG-AD-HFTVGITVTKKGSGLP 676
Score = 89 (36.4 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 31/104 (29%), Positives = 45/104 (43%)
Query: 254 KPEIRMDSRYVEAVSSENATVV-CRVDSIPPAAISW--YWNGRLLLNNTAFSSYQRIFVI 310
KP+I S +V++E TV C P ++W G L+ NT QR V+
Sbjct: 1852 KPQILTKSPQTVSVTAETDTVFPCEATGKPKPFVTWTKVSTGALMTPNTRI---QRFEVL 1908
Query: 311 EQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+ G +LV+ Q D G++ C A N G+ L VT
Sbjct: 1909 KNG------TLVIRKVQVQDRGQYMCTASNLHGLDRMVVLLSVT 1946
Score = 71 (30.1 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 264 VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVL 323
V+ + TV C P ++W ++ T+ YQ + + G +L++
Sbjct: 2356 VQVPYGDVVTVACEAKGEPMPKVTWLSPTNKVIP-TSSEKYQ---IYQDG------TLLI 2405
Query: 324 TNAQESDSGRFYCVAENRAG 343
AQ SDSG + C+ N AG
Sbjct: 2406 QKAQRSDSGNYTCLVRNSAG 2425
Score = 69 (29.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 21/78 (26%), Positives = 31/78 (39%)
Query: 276 CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335
C + P ++ W + + F + +FV G +L + N DSGR+
Sbjct: 2069 CTAKAAPLPSVRWVLGDGTQIRPSQFL-HGNLFVFPNG------TLYIRNLAPKDSGRYE 2121
Query: 336 CVAENRAGIADANFTLQV 353
CVA N G A L V
Sbjct: 2122 CVAANLVGSARRTVQLNV 2139
Score = 69 (29.3 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSS 320
S + A++ ++ C P ++ W +L N T S Q++ Q Y +
Sbjct: 2549 SEKITAMAGHTISLNCSAAGTPTPSLVW-----VLPNGTDLQSGQQL----QRFYHKADG 2599
Query: 321 LV-LTNAQESDSGRFYCVAENRAGIADANFTLQV 353
++ ++ D+G + CVA N AG + +L+V
Sbjct: 2600 MLHISGLSSVDAGAYRCVARNAAGHTERLVSLKV 2633
Score = 67 (28.6 bits), Expect = 8.5e-10, Sum P(3) = 8.5e-10
Identities = 23/89 (25%), Positives = 40/89 (44%)
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A + C+ + IP + W + ++L + + RI V G SL + +
Sbjct: 2456 AAGGSRKLIDCKAEGIPTPRVLWAFPEGVVLPAPYYGN--RITVHGNG------SLDIRS 2507
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVT 354
++SDS + C+A N G +A LQ+T
Sbjct: 2508 LRKSDSVQLVCMARNEGG--EARLILQLT 2534
Score = 64 (27.6 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 276 CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335
C P I W + +++ FS RI V G +LV+ + + D+G +
Sbjct: 2168 CSASGDPWPRILWRLPSKRMID-ALFSFDSRIKVFANG------TLVVKSVTDKDAGDYL 2220
Query: 336 CVAENRAG 343
CVA N+ G
Sbjct: 2221 CVARNKVG 2228
Score = 62 (26.9 bits), Expect = 6.7e-10, Sum P(3) = 6.7e-10
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 254 KPEIRMDSRY--VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIE 311
+P+I + S Y V + + C P ISW + R + T RI +
Sbjct: 1949 QPQI-LASHYQDVTVYLGDTIAMECLAKGTPAPQISWIFPDRRVWQ-TVSPVEGRITL-- 2004
Query: 312 QGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADA 347
+E ++ L + A SD G + CVA N AG AD+
Sbjct: 2005 ---HENRT-LSIKEASFSDRGVYKCVASNAAG-ADS 2035
Score = 59 (25.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 276 CRVDSIPPAAISWYWNGRLLLN-NTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334
C IP A I+W + L Y F+ QG SL + +A + D+G +
Sbjct: 2755 CMAMGIPKADITWELPDKSHLKAGVQARLYGNRFLHPQG------SLTIQHATQRDAGFY 2808
Query: 335 YCVAENRAGIADANFT 350
C+A+N G +D+ T
Sbjct: 2809 KCMAKNILG-SDSKTT 2823
Score = 45 (20.9 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 45/181 (24%), Positives = 71/181 (39%)
Query: 420 NKTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHSVINISNPDLINDTRK 479
NK P +T + + E KQF P ST + P LP LH + S P D R
Sbjct: 1644 NK-PEIT-TYPSGALPENKQFTTPRLSSTTI--P---LP---LH-MSKPSIPSKFTDRRT 1692
Query: 480 PE--GLSPEPHNDDVLFQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIG-GELDDNYP 536
+ G S N+++ N + +P + + SN + P ++ +L
Sbjct: 1693 DQFNGYSKVFGNNNIPEARN----PVGKPPSPRIPHYSNGRLPFFTNKTLSFPQLGVTRR 1748
Query: 537 PDYGL-PIVGQGQNELLP---NNIHPNAKTLRVWQRGVPVLPPVNALKRVLSRGSPDEGY 592
P P + +++P N IH ++ T + G P PP+ L + GSP
Sbjct: 1749 PQIPTSPAPVMRERKVIPGSYNRIHSHS-TFHL-DFGPPA-PPL--LHTPQTTGSPSTNL 1803
Query: 593 Q 593
Q
Sbjct: 1804 Q 1804
Score = 44 (20.5 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 408 EVMANGNAHAVVNKTPSL-TPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTL 462
E+ A G+ + K + TP + +F E P P Y + + NG L ++L
Sbjct: 2454 EIAAGGSRKLIDCKAEGIPTPRV-LWAFPEGVVLPAPYYGNRITVHGNGSLDIRSL 2508
Score = 43 (20.2 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 321 LVLTNAQESDSGRFYCVAENR 341
L + + + SDSG + C+A+ R
Sbjct: 540 LRIKSMEPSDSGLYQCIAQVR 560
Score = 41 (19.5 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 19/75 (25%), Positives = 27/75 (36%)
Query: 274 VVCRVDSIPPAAISWYWNGRLLLNNTAFSS-----YQRIFVIEQGEYERKSSLVLTNAQE 328
V C +P ISW L+N+ S +R V G +L
Sbjct: 2263 VDCVATGLPNPEISWSLPDGSLVNSFMQSDDSGGRTKRYVVFNNG------TLYFNEVGM 2316
Query: 329 SDSGRFYCVAENRAG 343
+ G + C AEN+ G
Sbjct: 2317 REEGDYTCFAENQVG 2331
Score = 38 (18.4 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 446 HSTEMISPN-GQLP--NKTLHSVINISNPDLINDTRKPEG 482
H+ ++S G P NK H++++I N + + P G
Sbjct: 2624 HTERLVSLKVGLKPEANKQYHNLVSIINGETLKLPCTPPG 2663
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 233 (87.1 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 82/309 (26%), Positives = 138/309 (44%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++G L +P AF GL NL+ L + ++ AL L NL +DL+ N +
Sbjct: 221 LVLAGMELTDIPGNAF--VGLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHK 278
Query: 114 IPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAK 171
I F+++ L++L + + I++ A +P L KL+ + + + ++S AF
Sbjct: 279 IQEGDFKNMLRLKELGINNMGELVSIDRFALDNLPELTKLEATNNPKFSYVSRLAFRDLP 338
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV----- 226
+LES+ LN N L+ + + L L I +H NP CDC + W++ K
Sbjct: 339 ALESLMLNNNALNSLYQATADSLPNLREISIHSNPLRCDC----VIQWMSSNKTTIRFME 394
Query: 227 PVQPACTGPERLSGKVFSDLHADDFA--CKPEIRMDS--RYVEAVSSENATVVCRVDSIP 282
P+ CT P + G+ D+ + + + C P I D+ ++ + CR + P
Sbjct: 395 PLSMFCTMPIEVRGQRVRDVFSREPSGQCLPMISHDTFPNHLNLDIGMTVDLDCRAMAEP 454
Query: 283 PAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENR 341
I W +G ++ +T YQ +L ++ Q DSG + CVA+N
Sbjct: 455 EPEIYWVTPSGNKVMMDTVSDKYQ---------LNSAGTLRISYIQVDDSGHYTCVAQNT 505
Query: 342 AGIADANFT 350
G AD T
Sbjct: 506 EG-ADTRVT 513
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 48 SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
S+LT L + N + +P F L NLQ+L++ I I A GL NL+ + L+
Sbjct: 120 SQLT-TLHLEENQIVEMPD--FSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLN 176
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF 167
N L +I S F+S L L + NP+ I F+ + L L ++ L I AF
Sbjct: 177 SNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAF 236
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
G +LES+ N+L P +++ L L ++L+ NP
Sbjct: 237 VGLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNP 275
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 66/248 (26%), Positives = 113/248 (45%)
Query: 17 CPSTCICK---WKGGKQW------MECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE 67
CP C+C+ W + ++C D L IP ++ TQVL + N + +E
Sbjct: 33 CPQLCVCEIRPWFTPQSTYREATTVDCNDLHLTRIPGNLSAD-TQVLLLQSNYIARTSEE 91
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
+ LLNL +L L++ + I L ++ L + L +N + +P + Q + L++
Sbjct: 92 LEQ---LLNLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQE 148
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L + N IS I AF + L++L ++ +RL+ I F +LE + + N +
Sbjct: 149 LYINHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGIL 208
Query: 188 VRSVEPLLKLMMI-----ELHD---NPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLS 239
+ +PL L + EL D N +V N+ S+ + D K V V P T ++L
Sbjct: 209 DLNFKPLTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFY--DNKLVRV-PQ-TALQKLP 264
Query: 240 GKVFSDLH 247
F DL+
Sbjct: 265 NLKFLDLN 272
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 42/168 (25%), Positives = 79/168 (47%)
Query: 39 LITIPEAPESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
++ +P+ +LT + ++ N+ QI + AF AGL NL +L L + IDS +
Sbjct: 132 IVEMPDFSLQDLTNLQELYINHNQISSIAPNAF--AGLRNLLRLHLNSNRLKAIDSRWFE 189
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
NL + + +N + I L F+ + LR L LA ++ I AF + L L +
Sbjct: 190 STPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYD 249
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHD 204
++L + A +L+ + LN N + + +L+L + +++
Sbjct: 250 NKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINN 297
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 233 (87.1 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 58/189 (30%), Positives = 96/189 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP CIC ++ + CR + L +P+A ELTQ LD+ GN L+++P AF+ G+ +
Sbjct: 33 CPQACICD--NSRRHVACRYQNLTEVPDAIP-ELTQRLDLQGNLLKVIPAAAFQ--GVPH 87
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C + + GA GL L+ ++L+ N L +P + LR L L N +
Sbjct: 88 LTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALE 147
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ G F + L L+++ + L ++ AF G + ++L+ N LS ++ L
Sbjct: 148 ELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPA 207
Query: 197 LMMIELHDN 205
L + LH N
Sbjct: 208 LRRLSLHHN 216
Score = 219 (82.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 66/221 (29%), Positives = 100/221 (45%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N L LP AF+ GLL ++ L L+ + + AL GL L + L N L +
Sbjct: 163 LNLAHNALVYLPAMAFQ--GLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQA 220
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P R L L L NP++ + +PGL +L + L+ + P AF L
Sbjct: 221 LPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRL 280
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACT 233
++ L GN+L P ++ +L + L NP C C R + WLA + V AC
Sbjct: 281 HTLDLRGNQLDTLP--PLQGPGQLRRLRLQGNPLWCGCQARPLLEWLA-RARVRSDGACQ 337
Query: 234 GPERLSGKVFSDLHADDFACKPEIRMDSRYVE--AVSSENA 272
GP RL G+ L D C + + +E AV+ A
Sbjct: 338 GPRRLRGEALDALRPWDLRCPGDAAQEEEELEERAVAGPRA 378
Score = 212 (79.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/189 (28%), Positives = 95/189 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C + + C L +P S+ TQ+LD+ N+ +P+ AF GL +
Sbjct: 396 CPRACVCVPES--RHSSCEGCGLQAVPRGFPSD-TQLLDLRRNHFPSVPRAAF--PGLGH 450
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C I ++++GAL GL LI + LSDN L + + + L L L RN
Sbjct: 451 LVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFL 510
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ A + +P L L + ++ ++ ++P ++L + L+GNR++ + ++ P +
Sbjct: 511 QVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARE 570
Query: 197 LMMIELHDN 205
L + L N
Sbjct: 571 LEKLHLDRN 579
Score = 202 (76.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 65/219 (29%), Positives = 108/219 (49%)
Query: 28 GKQWMECRDKFLITIPEAPESELTQV--LDMSGNNL-QILPKEAFRRAGLLNLQKLFLAR 84
G ++E R++FL +P A L + L + N + ++ P + R L + ++L+
Sbjct: 500 GYLYLE-RNRFL-QVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRAL---RWVYLSG 554
Query: 85 CHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ 144
I ++ GAL L ++ L N L +P+ + + L +L L+ NP+ + GAFQ
Sbjct: 555 NRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQ 614
Query: 145 FVP-GLVKLDMSESRLEHISPEAFTG-AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
V L L ++ S LE I P AF+G L+S+ L N+L P ++ L +L +I+L
Sbjct: 615 PVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALP--ALPSLSQLELIDL 672
Query: 203 HDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGK 241
NP+ CDC + + WL N+ V C P G+
Sbjct: 673 SSNPFHCDCQLLPLHRWLTGL-NLRVGATCATPPNARGQ 710
Score = 169 (64.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 54/179 (30%), Positives = 87/179 (48%)
Query: 30 QWMECRDKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHI 87
Q ++ + L IP A + + LD+ ++++ + AFR G L L L LA H+
Sbjct: 65 QRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLL--LNLASNHL 122
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP 147
++ ALDGL +L ++L N L + TF ++ L LNLA N + + AFQ +
Sbjct: 123 RELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLL 182
Query: 148 GLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
+ L +S + L ++PEA G +L + L+ N L P + L +EL NP
Sbjct: 183 RVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNP 241
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/133 (27%), Positives = 72/133 (54%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L+++ N+L+ LP+EA GL +L++L L + ++ G L L ++L+ N L
Sbjct: 114 LLNLASNHLRELPQEALD--GLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALV 171
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+P++ FQ + +R L L+ N +S + A +P L +L + + L+ + + A+
Sbjct: 172 YLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARG 231
Query: 173 LESIKLNGNRLSH 185
L ++L N L++
Sbjct: 232 LARLELGHNPLTY 244
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 35/114 (30%), Positives = 55/114 (48%)
Query: 96 DGLTNLIE-IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154
D + L + +DL NLL IP+ FQ V L L+L + + +GAF+ + L+ L++
Sbjct: 58 DAIPELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNL 117
Query: 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
+ + L + EA G SL ++L GN L + L L + L N V
Sbjct: 118 ASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALV 171
>UNIPROTKB|F1NZH1 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099859 OMA:YFELKAN
EMBL:AADN02029493 EMBL:AADN02029494 EMBL:AADN02029495
IPI:IPI00573056 Ensembl:ENSGALT00000027325 Uniprot:F1NZH1
Length = 826
Score = 238 (88.8 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 69/247 (27%), Positives = 116/247 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNLQILPKEAFRRAGL 74
C S C C+ K + C ++ + + E P S L++ N L +L F AGL
Sbjct: 30 CQSLCSCEDKDDTVIINCEERGIKMVSEINVPPSRPFH-LNLLNNGLTMLHVNDF--AGL 86
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+N L L +I I+ GA +GL L ++ ++ N L + TF + L L N
Sbjct: 87 VNAISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILKEDTFDGLENLEFLQADNNF 146
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVEP 193
I+ IE AF + L L ++++ +E++ P F L + L GN+L P V +E
Sbjct: 147 ITVIEASAFSKLSRLKVLILNDNAIEYLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 205
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQP-----ACTGPERLSGKVFSDLHA 248
+ +++ ++L DN W C+C++ +K WL +N+P Q C P + G + + L
Sbjct: 206 IGRILDLQLEDNKWACNCDLLQLKTWL---ENMPPQSIIGDVVCNSPPVIKGSILNRLRK 262
Query: 249 DDFACKP 255
+ P
Sbjct: 263 ESLCPIP 269
Score = 231 (86.4 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 70/248 (28%), Positives = 115/248 (46%)
Query: 17 CPSTCICK--WKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAG 73
CP C C G M C+++ + ++ + P + L ++GN +Q L K
Sbjct: 327 CPIPCHCTSHMLSGVL-MHCQERNIESLSDLGPPPTNPKKLILAGNIIQTLLKSDLM--D 383
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+L+ L L I ++ GA LT L ++ L+ N LT + F ++ L L L N
Sbjct: 384 YASLEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLEYN 443
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I ++ G F +P L L ++ + L+ + P F+G L + L N+ SH PV +V +
Sbjct: 444 AIKEVLPGTFNTMPKLKVLYLNNNLLQTLPPHIFSGVP-LARLNLKTNQFSHLPVSNVLD 502
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLA--DKKNVPVQPACTGPERLSGKVFSDLHAD- 249
L L+ IEL +NPW C C+ ++ W+ K + C P L K L+++
Sbjct: 503 ELDMLVQIELENNPWDCTCDSVGLQKWIQKLSKSTMMGGIFCKSPGHLKKKELKSLNSEV 562
Query: 250 ---DFACK 254
D +CK
Sbjct: 563 LCPDLSCK 570
Score = 42 (19.8 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 427 PVIETSSFTE-RKQFPPPSYHSTEMISPNGQLP 458
PVI+ S RK+ P ++E+ P+G LP
Sbjct: 250 PVIKGSILNRLRKESLCPIPTASELEDPSGSLP 282
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 215 (80.7 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 64/220 (29%), Positives = 110/220 (50%)
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L+ L L+ I + LD L L ++L+ N L + TF V+ L +LNL RN +
Sbjct: 529 SLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRL 588
Query: 136 SKI--EKGA---FQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRS 190
S I ++ A F+ + L +LD+ + L+ IS +A +G +LE + L N L+ V +
Sbjct: 589 SWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNA 648
Query: 191 VEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTG-PERLSGKVFSDLHAD 249
E +L+L + ++CDC++ + WL ++ + A G PE L + L +
Sbjct: 649 FEHMLRLNKLVFKSLNFICDCDLVWFQQWLKNRFPQQAEHAVCGYPEHLLDRHLKSLSSS 708
Query: 250 DFAC----KPEIRMDSRYVEAVSSENATVVCRVDSIPPAA 285
+ C KP + + + AV++ N T+ C + S P AA
Sbjct: 709 ELVCVDSPKPRVEQEPDDMLAVNAANITLEC-IASSPTAA 747
Score = 173 (66.0 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 56/189 (29%), Positives = 90/189 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C +C L +P P Q L ++ N L R LLN
Sbjct: 265 CPKDCKCL----NVLFDCDKLHLERVPVLPS--YVQTLHLANNKLNDTTVLEIRN--LLN 316
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L K+ L R + I GL+ L + L++N +TSI S + ++ LR L+L+RN +
Sbjct: 317 LTKVSLKRNLLEVIPK--FIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLH 374
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
IE +F LV L +S + + +++ +F +L ++L+ NRLS P+R + L +
Sbjct: 375 TIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQ 434
Query: 197 LMMIELHDN 205
L + L+ N
Sbjct: 435 LKKLALNFN 443
Score = 140 (54.3 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
LT+V + N L+++PK F GL L+ L LA HI I S +L L L +DLS N
Sbjct: 317 LTKV-SLKRNLLEVIPK--F--IGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRN 371
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
L +I +F L L L+ N I+ + + +F + L L++S +RL + F
Sbjct: 372 KLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKN 431
Query: 170 AKSLESIKLNGNRL 183
L+ + LN N+L
Sbjct: 432 LNQLKKLALNFNQL 445
Score = 138 (53.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 32 MECRDKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQ 89
+E + L T+P L Q+ L ++ N L+I FR GL +++ L L I
Sbjct: 414 LELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEI-NWSTFR--GLESMKNLQLKSNKIRA 470
Query: 90 IDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGL 149
+ G + + IDL+ N ++S+ ++ LR LNL+ N IS+IE ++F L
Sbjct: 471 LQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSL 530
Query: 150 VKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN--PW 207
LD+S + + P+ L+++ L NRL + + + + L + L N W
Sbjct: 531 EVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSW 590
Query: 208 VCD 210
+ +
Sbjct: 591 IIE 593
Score = 121 (47.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 35/130 (26%), Positives = 72/130 (55%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++ N++ + E+ A L L+ L L+R + I+ + NL+ + LS N +T+
Sbjct: 342 LVLANNHITSISSESL--AALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITN 399
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ +F ++ L DL L+ N +S + F+ + L KL ++ ++LE I+ F G +S+
Sbjct: 400 VNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE-INWSTFRGLESM 458
Query: 174 ESIKLNGNRL 183
++++L N++
Sbjct: 459 KNLQLKSNKI 468
Score = 71 (30.1 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 268 SSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
+ E A +VC P I+ G + ++ +R+ VI + +++ ++TNA+
Sbjct: 847 AGEMARLVCSASGDPTPEIALQKFGG---SEFPAATERRLQVIRE-----ENAFLITNAK 898
Query: 328 ESDSGRFYCVAENRAGIADANFTLQV 353
SDSG + C A + AG N TL V
Sbjct: 899 PSDSGIYTCTALSAAGEIKVNATLVV 924
Score = 58 (25.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 318 KSSLVLTNAQESDSGRFYC-VAENRAGIADANFTLQ 352
K LV+ NAQ +D+G F C + +N FTLQ
Sbjct: 992 KELLVILNAQSNDAGHFRCEITDN-----SRTFTLQ 1022
Score = 56 (24.8 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 28/115 (24%), Positives = 46/115 (40%)
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAA---------ISWYWNG-----RLLLNNT 299
KP + + + AV++ N T+ C + S P AA I W + R +++
Sbjct: 717 KPRVEQEPDDMLAVNAANITLEC-IASSPTAASLAAADELKIKWRHDNQHVQERPAVHDG 775
Query: 300 AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADAN-FTLQV 353
A + Q + + L LTN +GR+ CV N G A F + +
Sbjct: 776 ASTETQIRHDLSTNQTSIYGYLRLTNVTYESAGRYQCVVSNAFGTTYAQKFKISI 830
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 233 (87.1 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 90/363 (24%), Positives = 159/363 (43%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + + C+++ + +I E P+ + + ++ N + ++ + F A
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYITVVRRTDFLEAT 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I A L NL + L+ N + + F ++ L+ L L N
Sbjct: 434 GLDL--LHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ G F VP L L ++ ++L+ + F+G L + L GN + PV V +
Sbjct: 492 LIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLR-LNLRGNSFTSLPVSGVLD 550
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQPA-CTGPERLSG----KVFSDL 246
L L+ I+LHDNPW C C++ +K+W+ K V V C P++ + + S+L
Sbjct: 551 QLTSLIQIDLHDNPWDCTCDVVGMKLWIEQLKVGVLVDEVICKAPKKFAETYMRSIKSEL 610
Query: 247 HADDFACKPEIRMDSRYVEAVSSENA-TVVCRVDSI-PPAAISWYWNGRLLLNNTAFSSY 304
D++ ++ S NA T R++S PA + + + S
Sbjct: 611 LCPDYSDVVVSTPTPSSIQVPSRTNAATPAVRLNSTGTPAGLGAGTGASSVPLSVLILSL 670
Query: 305 QRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFLG 364
+F++ LV+ +++ S + N + ++ N V Y G G G
Sbjct: 671 LLVFIMSVFVAAGLFVLVMKRRKKNQSDH---TSTNNSDVSSFNMQYSV-YGGGGGG--G 724
Query: 365 GGH 367
GGH
Sbjct: 725 GGH 727
Score = 208 (78.3 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 70/250 (28%), Positives = 115/250 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA--PESELTQVLDMSGNNL-QILPKEAFRRAG 73
C + C C+ K G + C ++ +I++ E P + +L +SGN L ++ P E G
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLL-LSGNLLSRLYPNEFVNYTG 106
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L L I I++GA GL L + L++N L + TF + L L + N
Sbjct: 107 A---SILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYN 163
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVE 192
IS IE AF + L L ++++ L + F L + L GNRL P V ++
Sbjct: 164 YISVIEPNAFGKLHMLQVLILNDNLLSGLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQ 222
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLSGKVFSDLHADD 250
+ K++ ++L +NPW C C + S+K WL + C P RL G+ ++ +
Sbjct: 223 HMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQE 282
Query: 251 FACKPEIRMD 260
C ++ D
Sbjct: 283 L-CPRKLISD 291
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 87/314 (27%), Positives = 145/314 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++G L +P A GL +L+ L + ++ AL + NL +DL+ N +
Sbjct: 220 LVLAGMYLTDIPGNAL--VGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHK 277
Query: 114 IPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAK 171
I F+++ L++L + + +++ A +P L KL+ + + +L +I AF
Sbjct: 278 IQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVP 337
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWL-ADKKNV---- 226
+LES+ LN N L+ ++VE L L I +H NP CDC + W+ ++K N+
Sbjct: 338 ALESLMLNNNALNAIYQKTVESLPNLREISIHSNPLRCDCVIH----WINSNKTNIRFME 393
Query: 227 PVQPACTGPERLSGKVFSDLHADDFA--CKPEIRMDSRYVEAVSSENATVV---CRVDSI 281
P+ C P G ++ D + C P I DS + ++ + T V CR +
Sbjct: 394 PLSMFCAMPPEYKGHQVKEVLIQDSSEQCLPMISHDS-FPNRLNVDIGTTVFLDCRAMAE 452
Query: 282 PPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAEN 340
P I W G + T Y+ + +G E ++N Q DSGR+ CVA+N
Sbjct: 453 PEPEIYWVTPIGNKITVETLSDKYK---LSSEGTLE------ISNIQIEDSGRYTCVAQN 503
Query: 341 RAGIADANF-TLQV 353
G AD T++V
Sbjct: 504 VQG-ADTRVATIKV 516
Score = 158 (60.7 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 42 IPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNL 101
I E + LTQ+ + QI + L NLQ+L++ I I + A GL NL
Sbjct: 110 IKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTISAHAFAGLKNL 169
Query: 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
+ + L+ N L I S F S L L + NP+ I F+ + L L ++ L
Sbjct: 170 LRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLANLRSLVLAGMYLTD 229
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
I A G SLES+ N+L P +++ + L ++L+ NP
Sbjct: 230 IPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNP 274
Score = 152 (58.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 51/195 (26%), Positives = 86/195 (44%)
Query: 17 CPSTCICK---WKGGKQW------MECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE 67
CP C+C+ W + ++C D L IP S+ TQVL + NN+ K
Sbjct: 32 CPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSD-TQVLLLQSNNIA---KT 87
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
L NL +L ++ + I L LT L + L +N +T + Q + L++
Sbjct: 88 VDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQE 147
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L + N IS I AF + L++L ++ ++L+ I F +LE + + N +
Sbjct: 148 LYINHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGIL 207
Query: 188 VRSVEPLLKLMMIEL 202
+ +PL L + L
Sbjct: 208 DMNFKPLANLRSLVL 222
Score = 141 (54.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 43/131 (32%), Positives = 65/131 (49%)
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L NL+ L LA ++ I AL GL +L + DN L +P L Q V L+ L+L +N
Sbjct: 214 LANLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKN 273
Query: 134 PISKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGAKSLESIKLNGN-RLSHF---PV 188
PI KI++G F+ + L +L ++ L + A L ++ N +LS+
Sbjct: 274 PIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAF 333
Query: 189 RSVEPLLKLMM 199
RSV L LM+
Sbjct: 334 RSVPALESLML 344
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/175 (25%), Positives = 83/175 (47%)
Query: 46 PESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIE 103
P+S + + N+L++ +P +L LQ +A+ +D L L NL E
Sbjct: 46 PQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSNNIAKT----VDE--LQQLFNLTE 99
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+D S N T+I + ++ L L+L N I+++ Q + L +L ++ +++ IS
Sbjct: 100 LDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTIS 159
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP--WVCDCNMRSI 216
AF G K+L + LN N+L R + L ++ + +NP + D N + +
Sbjct: 160 AHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPL 214
Score = 120 (47.3 bits), Expect = 0.00095, P = 0.00095
Identities = 48/169 (28%), Positives = 77/169 (45%)
Query: 41 TIPEAPES-ELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
T+ E + LT+ LD S NN + KE A L L L L I ++ L L+
Sbjct: 87 TVDELQQLFNLTE-LDFSQNNFTNI-KEV-GLANLTQLTTLHLEENQITEMTDYCLQDLS 143
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
NL E+ ++ N +++I + F ++ L L+L N + I+ F P L L + E+ +
Sbjct: 144 NLQELYINHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPV 203
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
I F +L S+ L G L+ P ++ L L + +DN V
Sbjct: 204 IGILDMNFKPLANLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLV 252
>FB|FBgn0052055 [details] [associations]
symbol:CG32055 species:7227 "Drosophila melanogaster"
[GO:0016942 "insulin-like growth factor binding protein complex"
evidence=ISS] [GO:0005520 "insulin-like growth factor binding"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014296
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 HSSP:Q9BZR6 InterPro:IPR026906
Pfam:PF13306 RefSeq:NP_729599.1 UniGene:Dm.27841
ProteinModelPortal:Q9VT89 SMR:Q9VT89 IntAct:Q9VT89 MINT:MINT-901114
EnsemblMetazoa:FBtr0076304 GeneID:39188 KEGG:dme:Dmel_CG32055
UCSC:CG32055-RA FlyBase:FBgn0052055 InParanoid:Q9VT89 OMA:LHSNWLE
OrthoDB:EOG4XD26B PhylomeDB:Q9VT89 GenomeRNAi:39188 NextBio:812398
ArrayExpress:Q9VT89 Bgee:Q9VT89 Uniprot:Q9VT89
Length = 534
Score = 226 (84.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 59/172 (34%), Positives = 91/172 (52%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDG--LTNLIEIDLSDN 109
Q L + GN + ILP + F A L L+KL L++ +I ++ L LI +DLS+N
Sbjct: 317 QTLHLQGNKISILPDDVF--ANLTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNN 374
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
+ + L S+ F+++L L RN + ++ F + L L ++E+RLE I E
Sbjct: 375 YIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLTINENRLEEIDGEILDT 434
Query: 170 AKSLESIKLNGNRLSHFP-VRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWL 220
L ++LN NRL+ P ++S + LL+L I L NPW C C + I WL
Sbjct: 435 LDRLNHLELNNNRLTFLPDLKSSQNLLQLRNITLEGNPWQCLC-LDEITSWL 485
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 46/168 (27%), Positives = 86/168 (51%)
Query: 41 TIPEAP-ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
T+ AP E ++LD S N +++L F R L L+L + I +I A GL+
Sbjct: 257 TLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQ--INRIHPRAFLGLS 314
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAF--QFVPGLVKLDMSES 157
+L + L N ++ +P F ++ L L+L++N I K+ F + + L+ LD+S +
Sbjct: 315 SLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNN 374
Query: 158 RLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ + P A + ++ ++L NRL +R PL +L ++ +++N
Sbjct: 375 YIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLTINEN 422
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 237 (88.5 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 60/189 (31%), Positives = 96/189 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP TCIC ++ + CR + L +P A ELTQ LD+ GN L+++P AF+ L
Sbjct: 30 CPQTCICD--NSRRHVACRHQNLTEVPNAIP-ELTQRLDLRGNVLRVIPPAAFQ--DLPY 84
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C + + GA GL L+ ++L+ N L+++P + LR L L N +
Sbjct: 85 LTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLE 144
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ G F + L L+++ + L ++ P AF G ++L+ N LS ++ L
Sbjct: 145 ELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPA 204
Query: 197 LMMIELHDN 205
L + LH N
Sbjct: 205 LRRLSLHHN 213
Score = 220 (82.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 56/189 (29%), Positives = 97/189 (51%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C + E R L +P ++ TQ+LD+ N+ ++P+ AF+ GL
Sbjct: 389 CPRACVCVPESRHSGCEARG--LRAVPRGFPND-TQLLDLRRNHFPLVPRAAFQ--GLGR 443
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L C I ++++GAL GL +LI + LSDN L+ + + + L L L RN
Sbjct: 444 LVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFL 503
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ A +P L L + ++ ++ ++P G ++L + L+GNRL+ ++ P +
Sbjct: 504 QVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQE 563
Query: 197 LMMIELHDN 205
L + L N
Sbjct: 564 LEKLHLDRN 572
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 67/219 (30%), Positives = 111/219 (50%)
Query: 28 GKQWMECRDKFLITIPEAPESELTQV--LDMSGNNL-QILPKEAFRRAGLLNLQKLFLAR 84
G ++E R++FL +P A L + L + N + ++ P + AG L+ L+L+
Sbjct: 493 GYLYLE-RNRFL-QVPGAALGALPSLFSLHLQDNAVDRLAPGDL---AGGRALRWLYLSG 547
Query: 85 CHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ 144
+ Q+ GAL L ++ L N L +P+ + + L +L L+ NP+ +++GAF+
Sbjct: 548 NRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLRALQEGAFR 607
Query: 145 FVP-GLVKLDMSESRLEHISPEAFTG-AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
V L L ++ S LE ISP AF+G L+S+ L N+L P + L +L +I+L
Sbjct: 608 PVGRSLQHLFLNSSGLEQISPGAFSGLGPQLQSLYLQKNQLQALP--PLPGLRQLELIDL 665
Query: 203 HDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGK 241
NP+ CDC + + WL N+ V C P G+
Sbjct: 666 SGNPFHCDCQLLPLHRWLTGL-NLRVGATCATPPSARGQ 703
Score = 190 (71.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 58/183 (31%), Positives = 84/183 (45%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+++ N L LP AF+ GL+ + L L+ + + AL GL L + L N L S
Sbjct: 160 LNLAHNALVYLPPMAFQ--GLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQS 217
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P L R L L L NP + + +PGL +L + L+ + P AF L
Sbjct: 218 LPGLALSQARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRL 277
Query: 174 ESIKLNGNRLSHF-PVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
++ L GN+L P + L +L +L NP C C R + WLA + V AC
Sbjct: 278 HTLDLRGNQLDALLPPQGPGQLRRL---QLQGNPLWCGCRARPLLEWLA-RARVRSDGAC 333
Query: 233 TGP 235
GP
Sbjct: 334 WGP 336
Score = 183 (69.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 59/183 (32%), Positives = 91/183 (49%)
Query: 30 QWMECRDKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHI 87
Q ++ R L IP A +L + LD+ ++++ + AFR G L L L LA +
Sbjct: 62 QRLDLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLL--LNLASNRL 119
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVP 147
+ ALDGL +L ++L NLL + TF ++ L LNLA N + + AFQ
Sbjct: 120 SALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQ--- 176
Query: 148 GLVK---LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHD 204
GLV+ L +S + L ++PEA G +L + L+ N L P ++ L +EL
Sbjct: 177 GLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGH 236
Query: 205 NPW 207
NP+
Sbjct: 237 NPF 239
Score = 131 (51.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 36/133 (27%), Positives = 68/133 (51%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
+L+++ N L LP+EA GL +L++L L + ++ G L L ++L+ N L
Sbjct: 111 LLNLASNRLSALPQEALD--GLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALV 168
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+P + FQ + R L L+ N +S + A +P L +L + + L+ + A + A+
Sbjct: 169 YLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARG 228
Query: 173 LESIKLNGNRLSH 185
L ++L N ++
Sbjct: 229 LARLELGHNPFTY 241
Score = 37 (18.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 16/79 (20%), Positives = 32/79 (40%)
Query: 506 PTNSELGFDSNDKTPIIDGV--SIGGELDDNYPPDYGLPIVGQGQNELLPNNIHPNAKTL 563
P EL N + +G +G L + GL + G + + P ++L
Sbjct: 586 PALLELQLSGNPLRALQEGAFRPVGRSLQHLFLNSSGLEQISPGAF----SGLGPQLQSL 641
Query: 564 RVWQRGVPVLPPVNALKRV 582
+ + + LPP+ L+++
Sbjct: 642 YLQKNQLQALPPLPGLRQL 660
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 228 (85.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 71/274 (25%), Positives = 126/274 (45%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + + C+++ + +I E P+ + + ++ N + ++ + F A
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIALVRRSDFLEAT 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I A LTNL + L+ N + + F ++ L+ L L N
Sbjct: 434 GLDL--LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPV-RSVE 192
I +I+ G F VP L L ++ + L+ + F+G L + L N + PV R ++
Sbjct: 492 LIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTLLR-LNLRSNHFTSLPVSRVLD 550
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPVQPA-CTGPERLSGKVFSDLHADD 250
L L+ I+LHDNPW C C++ +K+W+ K V V C P++ + + ++
Sbjct: 551 QLTSLIQIDLHDNPWDCTCDVVGMKLWVEQLKAGVLVDEVICKAPKKFAETDMRSIKSE- 609
Query: 251 FACKPEIRMDSRYVEAVSSENATVVCRVDSIPPA 284
C P+ V + + V R ++ PA
Sbjct: 610 LLC-PDY--SDVVVSTPAPSSIQVPARTSAVTPA 640
Score = 209 (78.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 70/250 (28%), Positives = 115/250 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA--PESELTQVLDMSGNNL-QILPKEAFRRAG 73
C + C C+ K G + C ++ +I++ E P + +L +SGN L ++ P E G
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLL-LSGNLLSRLYPNEFVNYTG 106
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L L I I++GA GL L + L++N L + TF + L L + N
Sbjct: 107 A---SILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYN 163
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVE 192
IS IE AF + L L ++++ L + F L + L GNRL P V ++
Sbjct: 164 YISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQ 222
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLSGKVFSDLHADD 250
+ K++ ++L +NPW C C + S+K WL + C P RL G+ ++ +
Sbjct: 223 HMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQE 282
Query: 251 FACKPEIRMD 260
C ++ D
Sbjct: 283 L-CPRKLISD 291
>RGD|1561300 [details] [associations]
symbol:Nyx "nyctalopin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] RGD:1561300
GO:GO:0007601 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 KO:K08129 OrthoDB:EOG43JC4W
GeneTree:ENSGT00690000101803 EMBL:CH474009 EMBL:DQ393414
IPI:IPI00858403 RefSeq:NP_001094437.1 UniGene:Rn.153545
Ensembl:ENSRNOT00000013382 GeneID:302516 KEGG:rno:302516
UCSC:RGD:1561300 InParanoid:A1XIQ3 NextBio:649772
Genevestigator:A1XIQ3 Uniprot:A1XIQ3
Length = 476
Score = 223 (83.6 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 61/214 (28%), Positives = 100/214 (46%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
G+ L+ L L + + +GA L + L+DNLL S+P+ F+ +R LR LNL
Sbjct: 199 GMRRLRSLSLQANRVRAVHAGAFGDCVALEHLLLNDNLLASLPAAAFRGLRRLRTLNLGG 258
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N + + +G F + L L + + + + AF L ++ LNGNRL+ + +
Sbjct: 259 NALGSVARGWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAFQ 318
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDL---HAD 249
P L + L NPW CDC++ ++ W+ V AC P ++G+ S + +
Sbjct: 319 PGFFLGRLFLFRNPWRCDCHLEWLRDWMEGSGRV-ADVACASPGSVAGQDLSQVVFERSS 377
Query: 250 DFAC-KPEIRMDSRYVEAVSSEN-ATVVCRVDSI 281
D C P+ + + S E AT V R S+
Sbjct: 378 DGICVDPDELNFTTFSPGPSPEPVATTVSRFSSL 411
>UNIPROTKB|F1P1D7 [details] [associations]
symbol:F1P1D7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:AADN02025897 EMBL:AADN02025898 IPI:IPI00574714
ProteinModelPortal:F1P1D7 Ensembl:ENSGALT00000034958 Uniprot:F1P1D7
Length = 413
Score = 221 (82.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 72/249 (28%), Positives = 112/249 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP+ C+C + C+ +TIPE PE ++ + + N + +L + F +
Sbjct: 25 CPTDCVCY--PSPMTVSCQAHNFVTIPEGIPED--SERIFLQNNQITLLLRGHFSPS--- 77
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN-LLTSIPSLTFQSVRFLRDLNLARNP 134
+ L++ +I ID +G NL E+DL DN L ++ + TFQ + L L L +
Sbjct: 78 -MVTLWIYSNNITFIDPNTFEGFVNLEELDLGDNRYLRALAANTFQGLVKLHALYLYKCG 136
Query: 135 ISKIEKGAF-------QFV---PGLVKLD--MSESRLEHISPEAFTGAKSLESIKLNGNR 182
+S + G F F P V D +++L+ I AF + L ++ L N
Sbjct: 137 LSSLPSGIFGGLHTLHTFTCKTPHRVLQDDIFCQNQLQWIHRRAFHDLRRLTTLFLFNNS 196
Query: 183 LSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKV 242
LS + L L + L+ NPW CDC RS+ WL + C PER+ GK
Sbjct: 197 LSELQGDCLAHLGALEFLRLNGNPWSCDCKARSLWEWLHRFRGSSSNVICESPERMHGKD 256
Query: 243 FSDLHADDF 251
L A+DF
Sbjct: 257 LKVLRAEDF 265
>UNIPROTKB|F1NEZ4 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:LQADYNY
EMBL:AADN02073144 IPI:IPI00582200 Ensembl:ENSGALT00000014971
Uniprot:F1NEZ4
Length = 831
Score = 227 (85.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 70/240 (29%), Positives = 112/240 (46%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP CIC + + C++K + I E P+ + L ++ N LQ++ +
Sbjct: 318 CPDGCICTSQSLDNGLNVNCQEKKISNISELHPKPTTPKKLYLTSNYLQVIYRTDLAEYS 377
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSI-PSLTFQSVRFLRDLNLAR 132
L+L L L I I GA LT+L + L+ N L + PS+ F ++ L+ L L
Sbjct: 378 SLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEILYPSM-FDGLQSLQYLYLEY 434
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV- 191
N I +I F + L L ++ + L + F G SL + L N SH PVR V
Sbjct: 435 NVIKEILPHTFDTLSNLHLLFLNNNLLRSLPDNVF-GGTSLTRLNLRNNHFSHLPVRGVL 493
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWL-------ADKKNVPV---QPACTGPERLSGK 241
+ L L+ I+L +NPW C C++ ++ W+ + + N PV + C P + SG+
Sbjct: 494 DRLSALIQIDLQENPWDCTCDIMGLRNWIEQVTDQNSQQSNPPVVINEVICESPTKHSGE 553
Score = 227 (85.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 79/252 (31%), Positives = 115/252 (45%)
Query: 19 STCICKWKGGKQWMECRDKFLITIPEA--PESELTQVLDMSGNNL-QILPKEAFRRAGLL 75
S C C+ K + C +K TI P S++ Q+ ++GN L ++ P E +
Sbjct: 6 SRCPCEEKENVLNINCENKGFTTISLLLPPPSKIYQLF-LNGNALTRLFPNEFVNYS--- 61
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
N L L + +I +GA GL L + L++N L + TF + L L N I
Sbjct: 62 NAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKLEVLKEDTFLGLESLEYLQADYNYI 121
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EPL 194
S IE GAF + L L ++++ L + F L + L GNRL P V E +
Sbjct: 122 SAIEAGAFNKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRGNRLKMMPFAGVLEHI 180
Query: 195 LKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV-QPACTGPERLSGKVFSDLHADDFAC 253
+M I+L +NPW C C++ +K WL D V V + C P RL GK + L D C
Sbjct: 181 GGIMEIQLEENPWNCTCDLLPLKAWL-DTITVFVGEIVCETPFRLHGKDVTQLTRQDL-C 238
Query: 254 KPEIRMDSRYVE 265
+ DS E
Sbjct: 239 PRKSSSDSNQRE 250
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 213 (80.0 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 60/200 (30%), Positives = 88/200 (44%)
Query: 54 LDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N +L++L + F GL LQ L L RC + + S GL +L + L +N L
Sbjct: 106 LDLGDNPHLRVLAPDTFH--GLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQENGLL 163
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + +G F+ +P L +L + +RL + AF G
Sbjct: 164 YLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATVHRRAFRGLAR 223
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA- 231
L + L N L+ P + L L + L+ NPW CDC R + W + V P
Sbjct: 224 LTILYLFNNSLAALPGDPLAALPALQFLRLNANPWACDCRARPLWAWFR-RTRVSSSPVP 282
Query: 232 CTGPERLSGKVFSDLHADDF 251
C P G L DF
Sbjct: 283 CASPPHRRGTDLRHLRPRDF 302
>MGI|MGI:2145995 [details] [associations]
symbol:Amigo2 "adhesion molecule with Ig like domain 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=ISO] [GO:0007156 "homophilic cell adhesion"
evidence=ISO;ISS] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=ISO;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0043069
"negative regulation of programmed cell death" evidence=ISO;ISS]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2145995 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156
GeneTree:ENSGT00530000063545 CTD:347902 OMA:SCIAMNR
OrthoDB:EOG43XV36 EMBL:AY237006 EMBL:AB078880 IPI:IPI00281119
RefSeq:NP_001158035.1 RefSeq:NP_001158074.1 RefSeq:NP_835215.1
UniGene:Mm.24005 ProteinModelPortal:Q80ZD9 SMR:Q80ZD9 PRIDE:Q80ZD9
Ensembl:ENSMUST00000053106 GeneID:105827 KEGG:mmu:105827
InParanoid:Q80ZD9 NextBio:357900 Bgee:Q80ZD9 CleanEx:MM_AMIGO2
Genevestigator:Q80ZD9 GermOnline:ENSMUSG00000048218 Uniprot:Q80ZD9
Length = 519
Score = 217 (81.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 65/209 (31%), Positives = 102/209 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ CIC + C +K L +P L + LD+S N + +L + + +
Sbjct: 40 CPTACIC----ATDIVSCTNKNLSKVP-GNLFRLIKRLDLSYNRIGLLDAD-WIPVSFVK 93
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L +I I +G+ NL +DLS N L S+ S TFQ ++ L L L N IS
Sbjct: 94 LSTLILRHNNITSISTGSFSTTPNLKCLDLSSNRLKSVKSATFQELKALEVLLLYNNHIS 153
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIK---LNGNRLSHFPVRSVE- 192
++ AF + L KL +S + L + +TG L + ++ NR+ P+ +
Sbjct: 154 YLDPAAFGGLSHLQKLYLSGNFLTQFPMDLYTGRFKLADLTFLDVSYNRIPSIPMHHINL 213
Query: 193 -PLLKLMMIELHDNPWVCDCNMRSIKM-W 219
P +L I LH NP+VCDC++ S+ + W
Sbjct: 214 VPGRQLRGIYLHGNPFVCDCSLYSLLIFW 242
Score = 50 (22.7 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
SLV+ N D+G + C+A NR + + + +
Sbjct: 346 SLVIENPGFEDAGVYSCIAMNRQRLLNETVDIMI 379
Score = 38 (18.4 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 451 ISPNGQ-LPNKTLHSVINISN 470
I+ N Q L N+T+ +IN+SN
Sbjct: 363 IAMNRQRLLNETVDIMINVSN 383
>UNIPROTKB|E1BEI7 [details] [associations]
symbol:RTN4RL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:DAAA02048667 IPI:IPI00690499 Ensembl:ENSBTAT00000016317
Uniprot:E1BEI7
Length = 446
Score = 221 (82.9 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 60/199 (30%), Positives = 96/199 (48%)
Query: 54 LDMSGNN-LQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N L+ L E F+ GL+ L L+L +C + + +G GL +L + L DN +
Sbjct: 105 LDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIE 162
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + + F+ + L +L + E++L+ + +AF +
Sbjct: 163 YLQDDIFVDLVNLSHLFLHGNKLWSLGQDTFRGLVNLDRLLLHENQLQWVHHKAFHDLRR 222
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L ++ L N LS P + PL L + L+ N W C C RS+ WL + C
Sbjct: 223 LTTLFLFNNSLSELPGDCLAPLGALEFLRLNGNAWDCGCRARSLWEWLQRFRGSSSAVPC 282
Query: 233 TGPERLSGKVFSDLHADDF 251
PERL G+ L A+DF
Sbjct: 283 VSPERLHGQDLKLLRAEDF 301
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 64/269 (23%), Positives = 114/269 (42%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C+C + C+ IPE PE ++ + + N++ +L + F A
Sbjct: 25 CPRDCVCY--PAPMTVSCQAHNFAAIPEGIPED--SERIFLQNNHITLLRQGHFSPA--- 77
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN--LLTSIPSLTFQSVRFLRDLNLARN 133
+ L++ +I ID G +L E+DL DN L T P TFQ + L L L +
Sbjct: 78 -MVTLWIYSNNITFIDPNTFQGFVHLEELDLGDNRQLRTLAPE-TFQGLVKLHALYLYKC 135
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
+S + G F + L L + ++ +E++ + F +L + L+GN+L +
Sbjct: 136 GLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQDTFRG 195
Query: 194 LLKLMMIELHDNP--WV---CDCNMRSIKMWLADKKNVPVQPA-CTGPERLSGKVFSDLH 247
L+ L + LH+N WV ++R + ++ P C P L F L+
Sbjct: 196 LVNLDRLLLHENQLQWVHHKAFHDLRRLTTLFLFNNSLSELPGDCLAP--LGALEFLRLN 253
Query: 248 ADDFACKPEIRMDSRYVEAVSSENATVVC 276
+ + C R +++ ++ V C
Sbjct: 254 GNAWDCGCRARSLWEWLQRFRGSSSAVPC 282
>MGI|MGI:1923481 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10090 "Mus musculus" [GO:0001503 "ossification"
evidence=ISA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005021 "vascular endothelial growth factor-activated receptor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0042246 "tissue regeneration"
evidence=ISO] [GO:0048010 "vascular endothelial growth factor
receptor signaling pathway" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR009134 PRINTS:PR01832
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1923481 GO:GO:0005524
GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 MEROPS:I43.001 GO:GO:0048010 GO:GO:0005021
GO:GO:0038084 GeneTree:ENSGT00700000104014 CTD:285313
eggNOG:NOG239806 HOVERGEN:HBG107995 OMA:PYVSEDG OrthoDB:EOG45MN4F
EMBL:AC122038 EMBL:AK143421 EMBL:AC135238 EMBL:AK132367
EMBL:AK081990 IPI:IPI00405810 RefSeq:NP_001156356.1
UniGene:Mm.228086 UniGene:Mm.444186 HSSP:P07359
ProteinModelPortal:Q3V1M1 SMR:Q3V1M1 PhosphoSite:Q3V1M1
PRIDE:Q3V1M1 Ensembl:ENSMUST00000039419 GeneID:242050
KEGG:mmu:242050 UCSC:uc008piu.2 InParanoid:Q3V1M1 NextBio:385215
Bgee:Q3V1M1 CleanEx:MM_IGSF10 Genevestigator:Q3V1M1 Uniprot:Q3V1M1
Length = 2594
Score = 201 (75.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 73/290 (25%), Positives = 121/290 (41%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C ++L +IP+ + + +V ++ N+L L + F +GL
Sbjct: 29 CPRRCACYVPTE---VHCTFRYLTSIPDGIPANVERV-NLGYNSLTRLTENDF--SGLSR 82
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L I ++ GL +L + +S N + I T +R L L+L N I
Sbjct: 83 LELLMLHSNGIHRVSDKTFSGLQSLQVLKMSYNKVQIIEKDTLYGLRSLTRLHLDHNNIE 142
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIK--------LNGNRLSHFPV 188
I AF + L + + +RL + P+ F L+ K L+ N L+ P
Sbjct: 143 FINPEAFYGLTLLRLVHLEGNRLTKLHPDTFVSLSYLQIFKTSFIKYLYLSDNFLTSLPK 202
Query: 189 RSVEPLLKLMMIELHDNPWVCDCNMRSIKMWL--------ADKKNVPVQPA----CTGPE 236
V + L + LH NPW CDC+++ + W+ K+ +P P C P
Sbjct: 203 EMVSSMPNLESLYLHGNPWTCDCHLKWLSEWMQGNPDIIKCKKERIPSSPQQCPLCMNPR 262
Query: 237 RLSGKVFSDLHADDFAC-KPEI--RMDSRYVEAVSSENATVVCRVDSIPP 283
G+ + + + F C KP I + S+ + + V D I P
Sbjct: 263 ISKGRSIAMVPSGSFLCTKPTIDPSLKSKSLGIQEDNGSASVSPQDFIEP 312
Score = 87 (35.7 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 27/92 (29%), Positives = 42/92 (45%)
Query: 267 VSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQR-IFVIEQGEYERKSSLVLTN 325
+ E + C IP A+ISW +L NT FS R + ++ G +L +
Sbjct: 586 IMGEILDLPCLSTGIPDASISW-----ILPRNTVFSQSSRDMQILNNG------TLRILQ 634
Query: 326 AQESDSGRFYCVAENRAGIADANFTLQVTYRG 357
A D G + CVA N +G ++F + V +G
Sbjct: 635 ATPKDQGHYRCVAANPSGADFSSFQVSVQMKG 666
Score = 85 (35.0 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 259 MDSRYVEAVSSENATVV--CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYE 316
++S E + +TV CRV+ +P ISW + +++ T S ++++V G
Sbjct: 1719 LESHVKEITAHSGSTVKLKCRVEGMPRPTISWILANQTVVSETPEGS-RKVWVTPDG--- 1774
Query: 317 RKSSLVLTNAQESDSGRFYCVAENRAG 343
+L++ N D G + CVA N +G
Sbjct: 1775 ---TLIIHNLSLYDRGFYKCVANNPSG 1798
Score = 80 (33.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 266 AVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTN 325
A+ + CR D +PP I+W + L + RI V + G E + N
Sbjct: 2222 AIQHSKKHLDCRADGVPPPQITWIMPDNIFLTAPYYGG--RITVHQNGTLE------IRN 2273
Query: 326 AQESDSGRFYCVAENRAG 343
+ SDS F CV + G
Sbjct: 2274 IRLSDSADFTCVVRSEGG 2291
Score = 69 (29.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 24/91 (26%), Positives = 37/91 (40%)
Query: 276 CRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334
C VD P I W +G N S Y + G SL++ A + SG++
Sbjct: 2330 CSVDGNPTPEIIWILPDGTQFANGPQNSPY---LMASNG------SLIVYKATRNKSGKY 2380
Query: 335 YCVAENRAGIADANFTLQVTYRGVGLPFLGG 365
C A N+ G + L++ + V L + G
Sbjct: 2381 RCTARNKVGYIEKLILLEIGQKPVILTYEPG 2411
Score = 69 (29.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 254 KPEI-RMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQ 312
KP I + +++ E+ ++ C D IP + W G L+++ + + E
Sbjct: 2402 KPVILTYEPGMIKSAGGESLSLHCVSDGIPKPNVKWTTPGGLVIDRPQVGG--KYILHEN 2459
Query: 313 GEYERKSSLVLTNAQESDSGRFYCVAENRAGIA 345
G +LV+ D G + C A+N G A
Sbjct: 2460 G------TLVIKETTAHDRGNYICKAQNSVGQA 2486
Score = 67 (28.6 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 308 FVIEQGEY--ERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYR-GVGLPFLG 364
+V E G ++K L L A D+G ++C++ N A DA+ +TYR V P++
Sbjct: 521 YVSEDGRILIDKKGKLELQMADTFDAGLYHCISTNDA---DADI---LTYRITVVEPYVE 574
Query: 365 GGHING 370
H NG
Sbjct: 575 NKHENG 580
Score = 65 (27.9 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 276 CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIE-QGEYERKSSLVLTNAQESDSGRF 334
C +P I+W G LL+ R ++ QG +LV+ N + SDSG +
Sbjct: 2521 CVALGVPKPQITWETPGYSLLSTATERRPHRSEMLPLQG------TLVIQNLRASDSGVY 2574
Query: 335 YCVAENRAGIADANFTLQV 353
C A+N G A +QV
Sbjct: 2575 KCRAQNVLGADYATTYIQV 2593
Score = 49 (22.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+L + D G++ C A N G+ + TL V
Sbjct: 1678 TLSIQRVSIQDRGQYLCAASNPLGVDHLHVTLSV 1711
Score = 49 (22.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 14/79 (17%), Positives = 31/79 (39%)
Query: 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ + ++ V C+ P +SW ++NN A + + ++ +L
Sbjct: 2020 QVLHGKDFQVDCKASGSPVPEVSWSLPDGTVVNNVAQADDSG-YRTKRYTLFHNGTLYFN 2078
Query: 325 NAQESDSGRFYCVAENRAG 343
++ G + C A+N G
Sbjct: 2079 KVGMAEEGDYICSAQNTLG 2097
Score = 49 (22.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 18/88 (20%), Positives = 35/88 (39%)
Query: 257 IRMDSRYVEAVSSENATVVCRVDSIPPAAISWY-WNGRLLLNNTAFSSYQRIFVIEQGEY 315
I + + V E+ + C P ++ W ++G L ++ R F+ G
Sbjct: 1816 IEQKRQAIVGVLGESLKLPCTAKGTPQPSVHWVLYDGTEL--KPLQLTHSRFFLYPNG-- 1871
Query: 316 ERKSSLVLTNAQESDSGRFYCVAENRAG 343
+L + N S G + C+A + +G
Sbjct: 1872 ----TLYIRNIVSSVRGTYECIATSSSG 1895
Score = 42 (19.8 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 30/132 (22%), Positives = 54/132 (40%)
Query: 401 SKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNK 460
S NP + + +++ TP P ++ ++ K P P + ++ S + + K
Sbjct: 1501 SPNPEILTGSTDFPLSSLLTSTPMPAPRVDKPQDSQWKPSPWPE-NKFQLRSYSETI-EK 1558
Query: 461 TLHSVINISNPDLINDTRKPEGL--SPEPHNDDVLFQNNYWNQNIRQPTNSELGFDSNDK 518
I++S P L L + + H + +F QN PT+ L +DS K
Sbjct: 1559 GKRPEISLS-PHLSFPEASTHALHWNAQRHAEKSVFDKKP-AQN---PTSKHLPYDSLPK 1613
Query: 519 TPIIDGVSIGGE 530
T + IGG+
Sbjct: 1614 TILKKPRIIGGK 1625
>UNIPROTKB|E1C199 [details] [associations]
symbol:GPR125 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0009897 "external side of plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000203
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR007110
InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00303 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00390000016104 OMA:HHIPVNV EMBL:AADN02015333
EMBL:AADN02015334 EMBL:AADN02015335 EMBL:AADN02015336
EMBL:AADN02015337 EMBL:AADN02015338 EMBL:AADN02015339
EMBL:AADN02015340 EMBL:AADN02015341 EMBL:AADN02015342
IPI:IPI00599567 ProteinModelPortal:E1C199
Ensembl:ENSGALT00000023270 NextBio:20825394 Uniprot:E1C199
Length = 1322
Score = 228 (85.3 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 66/263 (25%), Positives = 127/263 (48%)
Query: 96 DGLTN-LIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154
+ L N + + LS+N +T + + +F + L L+L N IS I+ GAF + L +LD+
Sbjct: 80 EALPNRTVTLILSNNRITELKNCSFSGLNLLERLDLKNNLISTIDPGAFLGLSSLKRLDL 139
Query: 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMR 214
+ +R+ ++ + F G +L + L+GN S + + L L +E + +CDCN+
Sbjct: 140 TNNRIGCLNADVFKGLVNLIRLNLSGNLFSTLTQGTFDHLGSLKSLEFQTDYLLCDCNIL 199
Query: 215 SIKMWLADKKNVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENAT 273
+ WL ++ N+ V+ C P+ L + + + + C+P + + S Y+ + +
Sbjct: 200 WMHQWLKER-NITVRETKCAYPKSLQSQTVTGVKQELLTCEPPLELPSFYM---TPSHRQ 255
Query: 274 VVCRVDSIP----------PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK---SS 320
VV DS+P + WY +G+++ + + Q IFV + + S+
Sbjct: 256 VVFEGDSLPFQCMASYIDQDMQVLWYQDGKIVETDES----QGIFVEKNMIHNCSLIASA 311
Query: 321 LVLTNAQESDSGRFYCVAENRAG 343
L ++N Q +G + C + R G
Sbjct: 312 LTISNIQAGSTGNWGCHVQTRRG 334
>MGI|MGI:1917780 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:1917780
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 EMBL:CH466559 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:57497
eggNOG:NOG311542 KO:K16355 OMA:HWVAPDD OrthoDB:EOG469QT6
EMBL:AK017594 EMBL:AK044375 EMBL:AK122476 EMBL:BC139418
IPI:IPI00330152 RefSeq:NP_081728.2 UniGene:Mm.133607
ProteinModelPortal:Q80TG9 SMR:Q80TG9 IntAct:Q80TG9 STRING:Q80TG9
PhosphoSite:Q80TG9 PRIDE:Q80TG9 Ensembl:ENSMUST00000046254
GeneID:70530 KEGG:mmu:70530 UCSC:uc008cyd.2 InParanoid:Q80TG9
NextBio:331801 Bgee:Q80TG9 Genevestigator:Q80TG9
GermOnline:ENSMUSG00000040490 Uniprot:Q80TG9
Length = 788
Score = 225 (84.3 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 86/339 (25%), Positives = 147/339 (43%)
Query: 38 FLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDG 97
F+I I + +T ++D++ + I + F L +L+ L L + + L G
Sbjct: 63 FIIHIGRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRG 122
Query: 98 LTNLIEIDLSDNLLTSIPSLTFQSVRF-LRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L NL + +++N L I F+ L DL+L+ N + + + + + L +L +
Sbjct: 123 LVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDH 182
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFP-----VRSVEPLLKL------MMIELHDN 205
+ L+HI+ F + L + L NRL P RS LL + N
Sbjct: 183 NLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQASLLTATPFAPPLSFSFGGN 242
Query: 206 PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDSRYV 264
P C+C + +WL + C P L G+ F + ++F C+P I + +
Sbjct: 243 PLHCNCEL----LWLRRLERDDDLETCGSPGSLKGRYFWHIREEEFVCEPPLITQHTHKL 298
Query: 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ + AT+ C+ P I W L+ N++ R V + G + +++T
Sbjct: 299 LVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSS-----RTAVYDNGTLD----ILIT 349
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFL 363
+Q DSG F C+A N AG A A T++V+ V LP L
Sbjct: 350 TSQ--DSGPFTCIAANAAGEATA--TVEVSI--VQLPHL 382
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/191 (26%), Positives = 85/191 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
CP C+C+ C K L+ +P P+ + V L + GN + + ++ F A +
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVP--PDIDRRTVELRLGGNFIIHIGRQDF--ANMT 76
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L L L+R I I + L +L + L N L S+ T + + L+ L + N +
Sbjct: 77 GLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQL 136
Query: 136 SKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF+ F+ L LD+S + L + ++ +L + L+ N L H + L
Sbjct: 137 GGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADL 196
Query: 195 LKLMMIELHDN 205
KL ++L N
Sbjct: 197 QKLARLDLTSN 207
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 224 (83.9 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 87/322 (27%), Positives = 149/322 (46%)
Query: 46 PESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEID 105
P S L ++ ++G L +P A GL +L+ L + ++ AL + NL +D
Sbjct: 213 PLSNLRSLV-LAGMYLTDIPGNAL--VGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLD 269
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSES-RLEHIS 163
L+ N + I F+++ L++L + + +++ A +P L KL+ + + +L +I
Sbjct: 270 LNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIH 329
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWL-AD 222
AF +LES+ LN N L+ ++VE L L I +H NP CDC + W+ ++
Sbjct: 330 RLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIH----WINSN 385
Query: 223 KKNV----PVQPACTGPERLSGKVFSDLHADDFA--CKPEIRMDSRYVEAVSSENATVV- 275
K N+ P+ C P G+ ++ D + C P I D+ + ++ + T +
Sbjct: 386 KTNIRFMEPLSMFCAMPPEYRGQQVKEVLIQDSSEQCLPMISHDT-FPNHLNMDIGTTLF 444
Query: 276 --CRVDSIPPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332
CR + P I W G + T Y+ + +G E + N Q DSG
Sbjct: 445 LDCRAMAEPEPEIYWVTPIGNKITVETLSDKYK---LSSEGTLE------IANIQIEDSG 495
Query: 333 RFYCVAENRAGIADANF-TLQV 353
R+ CVA+N G AD T++V
Sbjct: 496 RYTCVAQNVQG-ADTRVATIKV 516
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 42 IPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNL 101
I E + LTQ+ + QI + L NLQ+L++ I I + A GL NL
Sbjct: 110 IKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISSISANAFSGLKNL 169
Query: 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
+ + L+ N L I S F S L L + NP+ I F+ + L L ++ L
Sbjct: 170 LRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTD 229
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
I A G SLES+ N+L P +++ + L ++L+ NP
Sbjct: 230 IPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNP 274
Score = 148 (57.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 50/195 (25%), Positives = 85/195 (43%)
Query: 17 CPSTCICK---WKGGKQW------MECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE 67
CP C+C+ W + ++C D L IP S+ TQVL + NN+ K
Sbjct: 32 CPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSD-TQVLLLQSNNIA---KT 87
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
L NL +L ++ + I L LT L + L +N ++ + Q + L++
Sbjct: 88 VDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQE 147
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L + N IS I AF + L++L ++ ++L+ I F +LE + + N +
Sbjct: 148 LYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGIL 207
Query: 188 VRSVEPLLKLMMIEL 202
+ PL L + L
Sbjct: 208 DMNFRPLSNLRSLVL 222
Score = 142 (55.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 47/175 (26%), Positives = 84/175 (48%)
Query: 46 PESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIE 103
P+S + + N+L++ +P +L LQ +A+ +D L L NL E
Sbjct: 46 PQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNIAKT----VDE--LQQLFNLTE 99
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+D S N T+I + ++ L L+L N IS++ Q + L +L ++ +++ IS
Sbjct: 100 LDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISSIS 159
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP--WVCDCNMRSI 216
AF+G K+L + LN N+L R + L ++ + +NP + D N R +
Sbjct: 160 ANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPL 214
>FB|FBgn0011828 [details] [associations]
symbol:Pxn "Peroxidasin" species:7227 "Drosophila
melanogaster" [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0004601
"peroxidase activity" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS00436
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
SMART:SM00214 EMBL:AE014296 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0005578 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0006909 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Gene3D:1.10.640.10 HSSP:P05164 GeneTree:ENSGT00550000074325
CTD:5829 ChiTaRS:PXN EMBL:U11052 EMBL:AY051536 EMBL:AY052120
RefSeq:NP_523891.2 RefSeq:NP_728759.1 RefSeq:NP_995975.1
RefSeq:NP_995976.1 RefSeq:NP_995977.1 UniGene:Dm.8030
ProteinModelPortal:Q9VZZ4 SMR:Q9VZZ4 IntAct:Q9VZZ4
MINT:MINT-1680107 STRING:Q9VZZ4 PeroxiBase:3369 PeroxiBase:3370
PaxDb:Q9VZZ4 PRIDE:Q9VZZ4 EnsemblMetazoa:FBtr0072951
EnsemblMetazoa:FBtr0072952 EnsemblMetazoa:FBtr0072953
EnsemblMetazoa:FBtr0072954 GeneID:38326 KEGG:dme:Dmel_CG12002
FlyBase:FBgn0011828 InParanoid:Q9VZZ4 OMA:GGRYECQ OrthoDB:EOG4JWSV8
PhylomeDB:Q9VZZ4 GenomeRNAi:38326 NextBio:808033 Bgee:Q9VZZ4
Uniprot:Q9VZZ4
Length = 1527
Score = 234 (87.4 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 70/272 (25%), Positives = 119/272 (43%)
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
Q L L HI ++ + A GL L + L+DN L + + LR + L N +S+
Sbjct: 55 QTLDLRFNHIEELPANAFSGLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSR 114
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKL 197
+ FQ +P L + + + + + F L + + N+L+ PV L L
Sbjct: 115 LPATIFQRMPRLEAIFLENNDIWQLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNL 174
Query: 198 MMIELHDNPWVCDCNMRSI-KMWLAD--KKNVPVQPACTGPERLSGKVFSDLHADDFAC- 253
+ L N C+C + S+ + W D ++ V + C P+ L + FS L F C
Sbjct: 175 KRLRLDGNAIDCNCGVYSLWRRWHLDVQRQLVSISLTCAAPQMLQNQGFSSLGEHHFKCA 234
Query: 254 KPEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
KP+ + + + + E + C V +P I+W ++NT Q + + EQ
Sbjct: 235 KPQFLVAPQDAQVAAGEQVELSCEVTGLPRPQITW-------MHNT-----QELGLEEQA 282
Query: 314 EYE--RKSSLVLTNAQESDSGRFYCVAENRAG 343
+ E SL++ +A SD G + C+A N G
Sbjct: 283 QAEILPSGSLLIRSADTSDMGIYQCIARNEMG 314
Score = 206 (77.6 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 52/167 (31%), Positives = 89/167 (53%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C ++ + C L +P+ P+ TQ LD+ N+++ LP AF +GL
Sbjct: 26 CPAGCTCL----ERTVRCIRAKLSAVPKLPQD--TQTLDLRFNHIEELPANAF--SGLAQ 77
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L LFL + + GAL+GLT L + L++N L+ +P+ FQ + L + L N I
Sbjct: 78 LTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPRLEAIFLENNDIW 137
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
++ G F +P L +L M ++L + + F +L+ ++L+GN +
Sbjct: 138 QLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNLKRLRLDGNAI 184
Score = 74 (31.1 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 23/95 (24%), Positives = 42/95 (44%)
Query: 255 PEIRMDSRYVEAVSSENATVVCRVDSIPPAA-ISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
P++ ++ + A++ + C+ D ISW +GRL+ N + E+
Sbjct: 553 PQLAIEPSNLVAITGTTIELPCQADQPEDGLQISWRHDGRLIDPNVQLA--------EKY 604
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAENRAGIADAN 348
+ SL + N D GR+ C +N+ G A A+
Sbjct: 605 QISGAGSLFVKNVTIPDGGRYECQLKNQFGRASAS 639
Score = 68 (29.0 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 21/78 (26%), Positives = 31/78 (39%)
Query: 276 CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335
C P I W+ NGR LL +T S Q + SL+L + +G +
Sbjct: 388 CAASGWPQPDIQWFVNGRQLLQSTP--SLQ---------LQANGSLILLQPNQLSAGTYR 436
Query: 336 CVAENRAGIADANFTLQV 353
C A N G A +++
Sbjct: 437 CEARNSLGSVQATARIEL 454
Score = 62 (26.9 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 28/100 (28%), Positives = 41/100 (41%)
Query: 255 PEIRMDSRYVEAVSSENATVV-CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQG 313
PEI + + + + A V+ C D P I W NG L NT Q
Sbjct: 458 PEI-LTAPQSQTIKLGKAFVLECDADGNPLPTIDWQLNGVPLPGNTPDL---------QL 507
Query: 314 EYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
E E + LV+ A++ +G + C A N G T++V
Sbjct: 508 ENEN-TELVVGAARQEHAGVYRCTAHNENGETSVEATIKV 546
Score = 37 (18.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 395 TITYPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSY-HSTEMISP 453
TI S++P Q+ + + N A+ T L P + + Q S+ H +I P
Sbjct: 543 TIKVERSQSPPQLAIEPS-NLVAITGTTIEL-PC-QADQPEDGLQI---SWRHDGRLIDP 596
Query: 454 NGQLPNK 460
N QL K
Sbjct: 597 NVQLAEK 603
>UNIPROTKB|Q6ZSA7 [details] [associations]
symbol:LRRC55 "Leucine-rich repeat-containing protein 55"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
SMART:SM00082 GO:GO:0005216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000113369 EMBL:AK127591 EMBL:BC136737
EMBL:BC136739 EMBL:BC150572 IPI:IPI00140246 RefSeq:NP_001005210.1
UniGene:Hs.199853 ProteinModelPortal:Q6ZSA7 SMR:Q6ZSA7
PhosphoSite:Q6ZSA7 DMDM:124056493 PRIDE:Q6ZSA7
Ensembl:ENST00000497933 GeneID:219527 KEGG:hsa:219527
UCSC:uc001njl.2 CTD:219527 GeneCards:GC11P056949 HGNC:HGNC:32324
HPA:HPA014053 neXtProt:NX_Q6ZSA7 PharmGKB:PA142671514
eggNOG:NOG244842 HOVERGEN:HBG081932 InParanoid:Q6ZSA7
OrthoDB:EOG4NS3BS GenomeRNAi:219527 NextBio:90671 Bgee:Q6ZSA7
CleanEx:HS_LRRC55 Genevestigator:Q6ZSA7 GermOnline:ENSG00000183908
Uniprot:Q6ZSA7
Length = 311
Score = 212 (79.7 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 62/215 (28%), Positives = 98/215 (45%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
QV+D S L +P + ++ + L LA I + G L L +DL +N L
Sbjct: 60 QVVDCSSQRLFSVPPDL-----PMDTRNLSLAHNRITAVPPGYLTCYMELQVLDLHNNSL 114
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESR-LEHISPEAFTGA 170
+P F + L L+L+ N S + FQ GLV +D+S + L + P+AF G
Sbjct: 115 MELPRGLFLHAKRLAHLDLSYNNFSHVPADMFQEAHGLVHIDLSHNPWLRRVHPQAFQGL 174
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN---VP 227
L + L+ L+ + ++E L L+ +++ NPWVC C M + WL ++
Sbjct: 175 MQLRDLDLSYGGLAFLSLEALEGLPGLVTLQIGGNPWVCGCTMEPLLKWLRNRIQRCTAD 234
Query: 228 VQPA-CTGPERLSGKVFSDLHADDF-ACKPEIRMD 260
Q A C GP + G L + F AC + +D
Sbjct: 235 SQLAECRGPPEVEGAPLFSLTEESFKACHLTLTLD 269
>RGD|1311831 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10116 "Rattus norvegicus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1311831 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 HOGENOM:HOG000237343 HOVERGEN:HBG052352
eggNOG:NOG311542 OrthoDB:EOG469QT6 EMBL:DQ070869 IPI:IPI00371727
UniGene:Rn.47365 ProteinModelPortal:Q460M5 IntAct:Q460M5
STRING:Q460M5 UCSC:RGD:1311831 InParanoid:Q460M5
Genevestigator:Q460M5 Uniprot:Q460M5
Length = 788
Score = 224 (83.9 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 86/339 (25%), Positives = 147/339 (43%)
Query: 38 FLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDG 97
F+I I + +T ++D++ + I + F L +L+ L L + + L G
Sbjct: 63 FIIHIGRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRG 122
Query: 98 LTNLIEIDLSDNLLTSIPSLTFQSVRF-LRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L NL + +++N L I F+ L DL+L+ N + + + + + L +L +
Sbjct: 123 LVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDH 182
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFP-----VRSVEPLLKL------MMIELHDN 205
+ L+HI+ F + L + L NRL P RS LL + N
Sbjct: 183 NLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQASLLTATPFAPPLSFSFGGN 242
Query: 206 PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDSRYV 264
P C+C + +WL + C P L G+ F + ++F C+P I + +
Sbjct: 243 PLHCNCEL----LWLRRLERDDDLKTCGSPGGLKGRYFWHIREEEFVCEPPLITQHTHKL 298
Query: 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ + AT+ C+ P I W L+ N++ R V + G + +++T
Sbjct: 299 LVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSS-----RTAVYDNGTLD----ILIT 349
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFL 363
+Q DSG F C+A N AG A A T++V+ V LP L
Sbjct: 350 TSQ--DSGPFTCIAANAAGEATA--TVEVSI--VQLPHL 382
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/191 (26%), Positives = 85/191 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
CP C+C+ C K L+ +P P+ + V L + GN + + ++ F A +
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVP--PDIDRRTVELRLGGNFIIHIGRQDF--ANMT 76
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L L L+R I I + L +L + L N L S+ T + + L+ L + N +
Sbjct: 77 GLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQL 136
Query: 136 SKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF+ F+ L LD+S + L + ++ +L + L+ N L H + L
Sbjct: 137 GGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADL 196
Query: 195 LKLMMIELHDN 205
KL ++L N
Sbjct: 197 QKLARLDLTSN 207
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 223 (83.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 87/322 (27%), Positives = 149/322 (46%)
Query: 46 PESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEID 105
P S L ++ ++G L +P A GL +L+ L + ++ AL + NL +D
Sbjct: 213 PLSNLRSLV-LAGMYLTDVPGNAL--VGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLD 269
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSES-RLEHIS 163
L+ N + I F+++ L++L + + +++ A +P L KL+ + + +L +I
Sbjct: 270 LNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIH 329
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWL-AD 222
AF +LES+ LN N L+ ++VE L L I +H NP CDC + W+ ++
Sbjct: 330 RLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIH----WINSN 385
Query: 223 KKNV----PVQPACTGPERLSGKVFSDLHADDFA--CKPEIRMDSRYVEAVSSENATVV- 275
K N+ P+ C P G+ ++ D + C P I D+ + ++ + T +
Sbjct: 386 KTNIRFMEPLSMFCAMPPEYRGQQVKEVLIQDSSEQCLPMISHDT-FPNHLNMDIGTTLF 444
Query: 276 --CRVDSIPPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332
CR + P I W G + T Y+ + +G E + N Q DSG
Sbjct: 445 LDCRAMAEPEPEIYWVTPIGNKITVETLSDKYK---LSSEGTLE------IANIQIEDSG 495
Query: 333 RFYCVAENRAGIADANF-TLQV 353
R+ CVA+N G AD T++V
Sbjct: 496 RYTCVAQNVQG-ADTRVATIKV 516
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 48/165 (29%), Positives = 75/165 (45%)
Query: 42 IPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNL 101
I E + LTQ+ + QI + L NLQ+L++ I I + A GL NL
Sbjct: 110 IKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISTISANAFSGLKNL 169
Query: 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
+ + L+ N L I S F S L L + NP+ I F+ + L L ++ L
Sbjct: 170 LRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTD 229
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
+ A G SLES+ N+L P +++ + L ++L+ NP
Sbjct: 230 VPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNP 274
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/195 (25%), Positives = 85/195 (43%)
Query: 17 CPSTCICK---WKGGKQW------MECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE 67
CP C+C+ W + ++C D L IP S+ TQVL + NN+ K
Sbjct: 32 CPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSD-TQVLLLQSNNIA---KT 87
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
L NL +L ++ + I L LT L + L +N ++ + Q + L++
Sbjct: 88 VDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQE 147
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L + N IS I AF + L++L ++ ++L+ I F +LE + + N +
Sbjct: 148 LYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGIL 207
Query: 188 VRSVEPLLKLMMIEL 202
+ PL L + L
Sbjct: 208 DMNFRPLSNLRSLVL 222
Score = 141 (54.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 47/175 (26%), Positives = 84/175 (48%)
Query: 46 PESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIE 103
P+S + + N+L++ +P +L LQ +A+ +D L L NL E
Sbjct: 46 PQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNIAKT----VDE--LQQLFNLTE 99
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+D S N T+I + ++ L L+L N IS++ Q + L +L ++ +++ IS
Sbjct: 100 LDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISTIS 159
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP--WVCDCNMRSI 216
AF+G K+L + LN N+L R + L ++ + +NP + D N R +
Sbjct: 160 ANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPL 214
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 224 (83.9 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 72/274 (26%), Positives = 125/274 (45%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + + C+++ + +I E P+ + + ++ N + ++ + F A
Sbjct: 374 CPTACSCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVRRTDFLEAT 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I A LTNL + L+ N + + F ++ L+ L L N
Sbjct: 434 GLDL--LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I +I+ G F VP L L ++ + L+ + F+G L + L N + PV V
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLD 550
Query: 194 LLK-LMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQPA-CTGPERLSGKVFSDLHADD 250
LK L+ I+LHDNPW C C++ +K+W+ K V V C P++ + + ++
Sbjct: 551 QLKSLIQIDLHDNPWDCTCDIVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIKSE- 609
Query: 251 FACKPEIRMDSRYVEAVSSENATVVCRVDSIPPA 284
C P+ V + + V R ++ PA
Sbjct: 610 LLC-PDY--SDVVVSTPTPSSIQVPARTSAVTPA 640
Score = 208 (78.3 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 73/253 (28%), Positives = 117/253 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA--PESELTQVLDMSGNNL-QILPKEAFRRAG 73
C + C C+ K G + C ++ +I++ E P + +L +SGN L ++ P E G
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLL-LSGNLLNRLYPNEFVNYTG 106
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L L I I++GA GL L + L++N L + TF + L L + N
Sbjct: 107 A---SILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYN 163
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVE 192
IS IE AF + L L ++++ L + F L + L GNRL P V ++
Sbjct: 164 YISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQ 222
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLSGKVFSDLHADD 250
+ K++ ++L +NPW C C + S+K WL + C P RL G+ ++ +
Sbjct: 223 HMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQE 282
Query: 251 FACKPEIRMDSRY 263
C P R+ S Y
Sbjct: 283 L-C-PR-RLISDY 292
>UNIPROTKB|A0N0X6 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:EF093509 IPI:IPI00699748 RefSeq:NP_001074207.1
UniGene:Bt.17579 ProteinModelPortal:A0N0X6 PRIDE:A0N0X6
Ensembl:ENSBTAT00000001560 GeneID:539619 KEGG:bta:539619 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 InParanoid:A0N0X6 OMA:GINNMGE OrthoDB:EOG4XKV6G
BioCyc:CATTLE:539619-MONOMER NextBio:20878110 Uniprot:A0N0X6
Length = 716
Score = 222 (83.2 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 85/319 (26%), Positives = 146/319 (45%)
Query: 46 PESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEID 105
P S L ++ ++G L +P A GL +L+ L + ++ AL + NL +D
Sbjct: 213 PLSNLRSLV-LAGMYLTDIPGNAL--VGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLD 269
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSES-RLEHIS 163
L+ N + I F+++ L++L + + +++ A +P L KL+ + + +L +I
Sbjct: 270 LNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIH 329
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWL-AD 222
AF +LES+ LN N L+ ++VE L L I +H NP CDC + W+ ++
Sbjct: 330 RLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIH----WINSN 385
Query: 223 KKNV----PVQPACTGPERLSGKVFSDLHADDFA--CKPEIRMDSRYVEAVSSENATVV- 275
K N+ P+ C P G+ ++ D + C P I D+ + ++ + T V
Sbjct: 386 KTNIRFMEPLSMFCAMPPEYRGQQVKEVLIQDSSEQCLPMISHDT-FPNHLNMDIGTTVF 444
Query: 276 --CRVDSIPPAAISWYWN-GRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSG 332
CR + P I W G + T Y+ + +G E ++ Q DSG
Sbjct: 445 LDCRAMAEPEPEIYWVTPLGNKITVETLSEKYK---LSSEGTLE------ISKIQIEDSG 495
Query: 333 RFYCVAENRAGIADANFTL 351
R+ CVA+N G AD +
Sbjct: 496 RYTCVAQNVEG-ADTRVVM 513
Score = 163 (62.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 42 IPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNL 101
I E + LTQ+ + QI + L NLQ+L++ I I + A GL NL
Sbjct: 110 IKEVGLANLTQLTTLHLEENQITEMNDYCLQDLSNLQELYINHNQISTISANAFSGLKNL 169
Query: 102 IEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEH 161
+ + L+ N L I S F S L L + NP+ I F+ + L L ++ L
Sbjct: 170 LRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTD 229
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
I A G SLES+ N+L P +++ + L ++L+ NP
Sbjct: 230 IPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNP 274
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 51/195 (26%), Positives = 86/195 (44%)
Query: 17 CPSTCICK---WKGGKQW------MECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE 67
CP C+C+ W + ++C D L IP S+ TQVL + NN+ K
Sbjct: 32 CPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSD-TQVLLLQSNNIA---KT 87
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
L NL +L ++ + I L LT L + L +N +T + Q + L++
Sbjct: 88 VDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMNDYCLQDLSNLQE 147
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L + N IS I AF + L++L ++ ++L+ I F +LE + + N +
Sbjct: 148 LYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGIL 207
Query: 188 VRSVEPLLKLMMIEL 202
+ +PL L + L
Sbjct: 208 DMNFKPLSNLRSLVL 222
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/175 (25%), Positives = 84/175 (48%)
Query: 46 PESELTQVLDMSGNNLQI--LPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIE 103
P+S + + N+L++ +P +L LQ +A+ +D L L NL E
Sbjct: 46 PQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSNNIAKT----VDE--LQQLFNLTE 99
Query: 104 IDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHIS 163
+D S N T+I + ++ L L+L N I+++ Q + L +L ++ +++ IS
Sbjct: 100 LDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMNDYCLQDLSNLQELYINHNQISTIS 159
Query: 164 PEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP--WVCDCNMRSI 216
AF+G K+L + LN N+L R + L ++ + +NP + D N + +
Sbjct: 160 ANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPL 214
Score = 124 (48.7 bits), Expect = 0.00035, P = 0.00035
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 41 TIPEAPES-ELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
T+ E + LT+ LD S NN + KE A L L L L I +++ L L+
Sbjct: 87 TVDELQQLFNLTE-LDFSQNNFTNI-KEV-GLANLTQLTTLHLEENQITEMNDYCLQDLS 143
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
NL E+ ++ N +++I + F ++ L L+L N + I+ F P L L + E+ +
Sbjct: 144 NLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPV 203
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWV 208
I F +L S+ L G L+ P ++ L L + +DN V
Sbjct: 204 IGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLV 252
>UNIPROTKB|Q8IWK6 [details] [associations]
symbol:GPR125 "Probable G-protein coupled receptor 125"
species:9606 "Homo sapiens" [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] InterPro:IPR001611 InterPro:IPR000203
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR007110
InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825 Pfam:PF02793
PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00303
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897
GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 eggNOG:NOG307919 HOVERGEN:HBG051777
HOGENOM:HOG000112767 EMBL:AY181243 EMBL:AY358306 EMBL:AC093735
EMBL:AC093814 EMBL:BC026009 EMBL:BC035645 IPI:IPI00452590
IPI:IPI00452591 IPI:IPI00452592 IPI:IPI00452593 RefSeq:NP_660333.2
UniGene:Hs.99195 ProteinModelPortal:Q8IWK6 SMR:Q8IWK6 STRING:Q8IWK6
MEROPS:S63.021 PhosphoSite:Q8IWK6 DMDM:50400542 PaxDb:Q8IWK6
PRIDE:Q8IWK6 DNASU:166647 Ensembl:ENST00000334304
Ensembl:ENST00000502482 Ensembl:ENST00000508133 GeneID:166647
KEGG:hsa:166647 UCSC:uc003gqm.1 UCSC:uc003gqn.1 UCSC:uc003gqo.3
UCSC:uc010ieo.1 CTD:166647 GeneCards:GC04M022346 HGNC:HGNC:13839
HPA:HPA008904 MIM:612303 neXtProt:NX_Q8IWK6 PharmGKB:PA134919579
InParanoid:Q8IWK6 KO:K08462 OMA:HHIPVNV OrthoDB:EOG42820R
ChiTaRS:GPR125 GenomeRNAi:166647 NextBio:88603 ArrayExpress:Q8IWK6
Bgee:Q8IWK6 CleanEx:HS_GPR125 Genevestigator:Q8IWK6
GermOnline:ENSG00000152990 Uniprot:Q8IWK6
Length = 1321
Score = 225 (84.3 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 73/294 (24%), Positives = 137/294 (46%)
Query: 65 PKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTN-LIEIDLSDNLLTSIPSLTFQSVR 123
P+ A R AG K+ + + Q+ D L N + + LS+N ++ + + +F +
Sbjct: 49 PRGAGRAAGAAE-GKVVCSSLELAQVLPP--DTLPNRTVTLILSNNKISELKNGSFSGLS 105
Query: 124 FLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRL 183
L L+L N IS I+ GAF + L +LD++ +R+ ++ + F G +L + L+GN
Sbjct: 106 LLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGNLF 165
Query: 184 SHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-CTGPERLSGKV 242
S + + L L +E +CDCN+ + W+ +K N+ V+ C P+ L +
Sbjct: 166 SSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEK-NITVRDTRCVYPKSLQAQP 224
Query: 243 FSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIP----------PAAISWYWNG 292
+ + + C P + + S Y+ + + VV DS+P + WY +G
Sbjct: 225 VTGVKQELLTCDPPLELPSFYM---TPSHRQVVFEGDSLPFQCMASYIDQDMQVLWYQDG 281
Query: 293 RLLLNNTAFSSYQRIFVIEQGEYERK---SSLVLTNAQESDSGRFYCVAENRAG 343
R++ + + Q IFV + + S+L ++N Q +G + C + + G
Sbjct: 282 RIVETDES----QGIFVEKNMIHNCSLIASALTISNIQAGSTGNWGCHVQTKRG 331
>MGI|MGI:2685197 [details] [associations]
symbol:Lrrc55 "leucine rich repeat containing 55"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685197 GO:GO:0016021
GO:GO:0005886 InterPro:IPR000483 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000113369
GeneTree:ENSGT00700000104451 CTD:219527 eggNOG:NOG244842
HOVERGEN:HBG081932 OrthoDB:EOG4NS3BS EMBL:AK134968 IPI:IPI00352775
RefSeq:NP_001028518.1 UniGene:Mm.291095 UniGene:Mm.476412
ProteinModelPortal:Q3UY51 SMR:Q3UY51 PhosphoSite:Q3UY51
PRIDE:Q3UY51 Ensembl:ENSMUST00000099930 Ensembl:ENSMUST00000111601
GeneID:241528 KEGG:mmu:241528 UCSC:uc008kkc.1 InParanoid:Q3UY51
OMA:TANCCHR NextBio:385045 Bgee:Q3UY51 CleanEx:MM_LRRC55
Genevestigator:Q3UY51 Uniprot:Q3UY51
Length = 311
Score = 210 (79.0 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 61/215 (28%), Positives = 99/215 (46%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
QV+D S L +P + ++ + L LA I + G L L +DL +N L
Sbjct: 60 QVVDCSNQRLFSVPPDL-----PMDTRNLSLAHNRIAAVPPGYLTCYMELRVLDLRNNSL 114
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESR-LEHISPEAFTGA 170
+P F + L L+L+ N +S + F+ GLV +D+S + L + P+AF G
Sbjct: 115 MELPPGLFLHAKRLAHLDLSYNNLSHVPADMFREAHGLVHIDLSHNPWLRRVHPQAFQGL 174
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN---VP 227
L + L+ L+ + ++E L L+ +++ NPWVC C M + WL ++
Sbjct: 175 VHLRDLDLSYGGLAFLSLEALEGLPGLVTLQIGGNPWVCGCTMEPLLKWLRNRIQRCTAD 234
Query: 228 VQPA-CTGPERLSGKVFSDLHADDF-ACKPEIRMD 260
Q A C GP + G L + F AC + +D
Sbjct: 235 SQLAECRGPPEVEGAPLFSLTEESFKACHLTLTLD 269
>RGD|1561726 [details] [associations]
symbol:Lrrc55 "leucine rich repeat containing 55" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1561726 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
SMART:SM00082 GO:GO:0005216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000113369 GeneTree:ENSGT00700000104451
CTD:219527 eggNOG:NOG244842 HOVERGEN:HBG081932 OrthoDB:EOG4NS3BS
EMBL:BC099134 IPI:IPI00362839 RefSeq:NP_001116447.1
UniGene:Rn.209245 ProteinModelPortal:Q4KLL3
Ensembl:ENSRNOT00000031745 GeneID:311171 KEGG:rno:311171
UCSC:RGD:1561726 InParanoid:Q4KLL3 NextBio:663112
Genevestigator:Q4KLL3 Uniprot:Q4KLL3
Length = 311
Score = 210 (79.0 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 61/215 (28%), Positives = 99/215 (46%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
QV+D S L +P + ++ + L LA I + G L L +DL +N L
Sbjct: 60 QVVDCSNQRLFSVPPDL-----PMDTRNLSLAHNRIAAVPPGYLTCYMELRVLDLRNNSL 114
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESR-LEHISPEAFTGA 170
+P F + L L+L+ N +S + F+ GLV +D+S + L + P+AF G
Sbjct: 115 MELPPGLFLHAKRLAHLDLSYNNLSHVPADMFREAHGLVHIDLSHNPWLRRVHPQAFQGL 174
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN---VP 227
L + L+ L+ + ++E L L+ +++ NPWVC C M + WL ++
Sbjct: 175 VHLRDLDLSYGGLAFLSLEALEGLPGLVTLQIGGNPWVCGCTMEPLLKWLRNRIQRCTAD 234
Query: 228 VQPA-CTGPERLSGKVFSDLHADDF-ACKPEIRMD 260
Q A C GP + G L + F AC + +D
Sbjct: 235 SQLAECRGPPEVEGAPLFSLTEESFKACHLTLTLD 269
>ZFIN|ZDB-GENE-040924-5 [details] [associations]
symbol:lrit1a "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1a" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-040924-5 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG108105 EMBL:BC095674 IPI:IPI00498659 UniGene:Dr.82959
ProteinModelPortal:Q502J4 InParanoid:Q502J4 Uniprot:Q502J4
Length = 643
Score = 220 (82.5 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 75/288 (26%), Positives = 128/288 (44%)
Query: 79 KLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKI 138
KL + + I +I S A L+NL + +S N+L+S+ S +F+ + L +L L N +S
Sbjct: 63 KLRIEKTAIKRIPSEAFSYLSNLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLSSF 122
Query: 139 EKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR------SVE 192
+ +P L LD+ ++L + EA K++ + L+ N L P +++
Sbjct: 123 PWESLMDMPSLRLLDIHNNQLSSLPSEAALYMKNITYLDLSSNNLLTVPAEVLNTWLTIK 182
Query: 193 PLL----KLMMIELHDNPWVCDCNMRSIKMWLADKKN----VPVQPACTGPERLSGKVFS 244
P L +++ LHDNPW+CDC + + + + + C PE LSG +FS
Sbjct: 183 PTLGAESSKLILGLHDNPWLCDCRLYDLVQFQKSPSLSVAFIDTRLRCADPESLSGVLFS 242
Query: 245 DLHADDFACK-PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSS 303
D A+ C+ P + V + N + C P ++W LN T
Sbjct: 243 D--AELRRCQGPRVHTAVARVRSAVGNNVLLRCGTVGAPIPELAWRRADGKPLNGTVLLE 300
Query: 304 YQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTL 351
+ ++ S L + D+G++ C A N AG A+A +L
Sbjct: 301 NSKEGIVW-------SILSVPAVSYRDTGKYICKATNYAGSAEAVISL 341
Score = 202 (76.2 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 76/299 (25%), Positives = 133/299 (44%)
Query: 17 CPSTCICKWK----GGK-QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRR 71
CP+ C C + G + + + C D + +P + + T L + ++ +P EAF
Sbjct: 23 CPTQCSCFYHNLSDGSRARSVICNDPEISLVPASFPGD-TSKLRIEKTAIKRIPSEAF-- 79
Query: 72 AGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
+ L NL+ L+++ + ++S + GL +L E+ L N L+S P + + LR L++
Sbjct: 80 SYLSNLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLSSFPWESLMDMPSLRLLDIH 139
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV 191
N +S + A ++ + LD+S + L + E + +IK P
Sbjct: 140 NNQLSSLPSEAALYMKNITYLDLSSNNLLTVPAEVLN---TWLTIK---------PTLGA 187
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN----VPVQPACTGPERLSGKVFSDLH 247
E KL++ LHDNPW+CDC + + + + + C PE LSG +FSD
Sbjct: 188 ESS-KLIL-GLHDNPWLCDCRLYDLVQFQKSPSLSVAFIDTRLRCADPESLSGVLFSD-- 243
Query: 248 ADDFACK-PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWY------WNGRLLLNNT 299
A+ C+ P + V + N + C P ++W NG +LL N+
Sbjct: 244 AELRRCQGPRVHTAVARVRSAVGNNVLLRCGTVGAPIPELAWRRADGKPLNGTVLLENS 302
>UNIPROTKB|F1NZH0 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:NGLPCPG GeneTree:ENSGT00680000099775
EMBL:AADN02029556 IPI:IPI00578668 ProteinModelPortal:F1NZH0
Ensembl:ENSGALT00000027326 Uniprot:F1NZH0
Length = 710
Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 76/268 (28%), Positives = 122/268 (45%)
Query: 21 CICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNL-QILPKEAFRRAGLLNL 77
C C G ++C K ++ AP S+ + + GN+L ++ P E F A N
Sbjct: 47 CACNEIEGDLHVDCEKKGFTSLQHFTAPTSQFYHLF-LHGNSLTRLFPNE-F--ANFYNA 102
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
L + + +I GA GL + + +++N + S TF + L L N +
Sbjct: 103 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRD 162
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EPLLK 196
I+ GAF+ + L L ++++ + + P F + + L GNRL P V E +
Sbjct: 163 IDPGAFRDLNKLEVLILNDNLISTLPPNVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 221
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPV-QPACTGPERLSGKVFSDLHADDFACK 254
+ I L DNPW C C++ S+K WL + KN + + C P RL GK ++ + CK
Sbjct: 222 IAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVICEAPTRLQGKDLNETTEQEL-CK 280
Query: 255 PEIRMDSRYVEAVSSENATVVCRVDSIP 282
R+DS + A +E T C IP
Sbjct: 281 KN-RVDSS-LAAPPAEEET--CDPGPIP 304
Score = 216 (81.1 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 67/264 (25%), Positives = 118/264 (44%)
Query: 17 CPSTCIC-KWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C C + G + C D+ + ++ + P+ Q L + N + + K F
Sbjct: 357 CPQICSCDQIPGSGLKVNCNDRNVSSLVDLKPKPSNVQELFLRDNKIHTIRKSHFLDYRK 416
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
LNL L L +I +++ L +L + + N L ++ F ++ L LN+ N
Sbjct: 417 LNL--LDLGNNNIATVENNTFKNLFDLRWLYMDSNYLDTLSREKFTGLQNLEYLNVEFNG 474
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
I I G F +P L L ++ + L + + F G SL + ++ N + PV V +
Sbjct: 475 IQLIMPGTFNAMPKLRVLILNNNLLRSLPVDVFAGV-SLSKLSIHNNYFMYLPVAGVLDQ 533
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMW--LADKKNVPVQPACTGPERLSGKVFSDLHADDF 251
L + I+LH NPW C C + K W + K + C PE + F L ++D
Sbjct: 534 LTSITQIDLHGNPWDCTCPIVPFKQWAEMLRPKVIMSDLRCESPEDFFKEDFESL-SNDV 592
Query: 252 ACKPEIRMDSRYVEAVSSENATVV 275
C P++++ + +++N+T V
Sbjct: 593 IC-PQLKISPTL--SSTNKNSTGV 613
>RGD|628607 [details] [associations]
symbol:Lrit1 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:628607
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0030176
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:26103 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG42JNR2
EMBL:AB028461 IPI:IPI00215326 RefSeq:NP_647547.2 UniGene:Rn.20309
ProteinModelPortal:Q9JMH2 STRING:Q9JMH2 PhosphoSite:Q9JMH2
PRIDE:Q9JMH2 Ensembl:ENSRNOT00000017773 GeneID:246214
KEGG:rno:246214 UCSC:RGD:628607 InParanoid:Q9JMH2 NextBio:623495
Genevestigator:Q9JMH2 GermOnline:ENSRNOG00000012790 Uniprot:Q9JMH2
Length = 623
Score = 226 (84.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 98/351 (27%), Positives = 152/351 (43%)
Query: 17 CPSTCICKWK----GGK-QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRR 71
CPS C C G K + + C D L T+P A T L + ++ +P E FR
Sbjct: 23 CPSQCSCSLHILSDGSKARTVVCSDPDL-TLPPASIPPDTCKLRLERTAIRRVPGETFRP 81
Query: 72 AGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
L L++L+L + ++ + L GL L E+ L N L + P + L+ L+L
Sbjct: 82 --LSRLEQLWLPYNALSELSTLMLRGLRRLRELRLPGNHLVTFPWAALKDTPQLQLLDLQ 139
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV 191
N +S + A F+ L LD+S ++L + E L++ G LS R
Sbjct: 140 ANRLSTLPPEAVHFLENLTFLDLSNNQLMRLPEELLDTWAHLKT----GPYLSSRRTR-- 193
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKM----WLADKKNVPVQPACTGPERLSGKVFSDLH 247
+++ L DNPWVCDC + + W ++ + + C P L+G FS L
Sbjct: 194 ------LVLGLQDNPWVCDCRLYDLVHLLDGWASNLIFIEARLRCGSPRSLAGVAFSQLE 247
Query: 248 ADDFACK-PEIRMDSRYVEAVSSENATVV--CRVDSIPPAAISWYW-NGRLLLNNTAFSS 303
C+ PE+R + +S +TV+ C IP +SW NGR L N T
Sbjct: 248 LRK--CQSPELRPGVTSI--ISPLGSTVLLRCGATGIPGPEMSWRRANGRPL-NGTV--- 299
Query: 304 YQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+Q + + + L L DSG + C A+N G ++ +L VT
Sbjct: 300 HQEV----SSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGASETLISLIVT 346
Score = 37 (18.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 444 SYHSTEMISPNGQLPNKTLHSVI 466
+YHS ++ Q N T SV+
Sbjct: 440 TYHSVSLVWKAPQAGNTTAFSVL 462
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 216 (81.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 54/191 (28%), Positives = 83/191 (43%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I+ GA L L + L+ N L P L F L L+L+ N I I + AF+
Sbjct: 5 ISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGA 64
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
+ L + +++ I AF + LE + LN N ++ V S + KL LH N
Sbjct: 65 VDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNN 124
Query: 207 WVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK-PEIRMDSRYVE 265
CDC++ + WL + V + C GP L G +++ +F C PE S
Sbjct: 125 LYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGPEKSHQSFMAP 184
Query: 266 AVSSENATVVC 276
+ S + + C
Sbjct: 185 SCSVLHCPIAC 195
Score = 195 (73.7 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 69/275 (25%), Positives = 121/275 (44%)
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
+ ++ L + I I GA L +DLS+N ++ + FQ +R L L L N I+
Sbjct: 220 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 279
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ K F+ + L L ++ +++ + +AF +L + L N+L + L
Sbjct: 280 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA 339
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQPA---CTGPERLSGKVFSDLHADDFA 252
+ + L NP++CDC+++ WLAD + P++ + CT P RL+ K + + F
Sbjct: 340 IQTMHLAQNPFICDCHLK----WLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR 395
Query: 253 CK--PEIRM--------DSRYVEAVSSENATVVC---RVDSIPPAAISWYWNGRLLLNNT 299
C + R D E E TV C +++ IP I Y L LNN
Sbjct: 396 CSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDH-IPQY-TAELRLNNN 453
Query: 300 AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRF 334
F+ + + ++ RK +L + + G F
Sbjct: 454 EFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAF 488
Score = 166 (63.5 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 41/162 (25%), Positives = 75/162 (46%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L L +I+LS+N +T I F+ + ++ L N + ++ F+ + L
Sbjct: 461 TGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKT 520
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ + ++FTG S+ + L N+++ + L L + L NP+ C+C
Sbjct: 521 LMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNC 580
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
++ + WL K+ V P C P L D+ DF C
Sbjct: 581 HLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 622
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 45/167 (26%), Positives = 83/167 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPE-APESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ G ++C ++ L IP+ P+ T L ++ N +L F++ L
Sbjct: 416 CPEKCRCE---GTT-VDCSNQKLNKIPDHIPQ--YTAELRLNNNEFTVLEATGIFKK--L 467
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+K+ L+ I I+ GA +G + + EI L+ N L ++ F+ + L+ L L N
Sbjct: 468 PQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 527
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS + +F + + L + ++++ ++P AF SL ++ L N
Sbjct: 528 ISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLAN 574
Score = 128 (50.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 59 NNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLT 118
N + + + AF+ L L++L L R ++ G L +DLS+N + +IP
Sbjct: 3 NKISTIERGAFQ--DLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKA 60
Query: 119 FQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKL 178
F+ +++L L N IS IE GAF+ + L L ++ + + +S +F L + +L
Sbjct: 61 FRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRL 120
Query: 179 NGNRL 183
+ N L
Sbjct: 121 HSNNL 125
Score = 49 (22.3 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 545 GQGQNELLPNNIHPNAKTLRVWQRGVPVLPP 575
G+G E+ P N+ +R+ Q + V+PP
Sbjct: 206 GKGLTEI-PTNLPETITEIRLEQNSIRVIPP 235
>MGI|MGI:2385320 [details] [associations]
symbol:Lrit1 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:2385320
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0030176
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:26103 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OMA:RRINEYF
OrthoDB:EOG42JNR2 EMBL:AK044631 EMBL:BC032270 IPI:IPI00279273
RefSeq:NP_666357.2 UniGene:Mm.37907 ProteinModelPortal:Q8K099
SMR:Q8K099 PhosphoSite:Q8K099 PRIDE:Q8K099
Ensembl:ENSMUST00000120052 GeneID:239037 KEGG:mmu:239037
UCSC:uc007tbr.2 InParanoid:Q8K099 NextBio:383963 Bgee:Q8K099
Genevestigator:Q8K099 GermOnline:ENSMUSG00000041044 Uniprot:Q8K099
Length = 624
Score = 225 (84.3 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 98/352 (27%), Positives = 153/352 (43%)
Query: 17 CPSTCICKWK----GGK-QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRR 71
CPS C C + G K + + C D L T+P A T L + ++ +P E FR
Sbjct: 23 CPSECSCSLRILSDGSKARTVVCSDPDL-TLPPASIPPDTCKLRLERTAIRRVPGETFRP 81
Query: 72 AGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
L L++L+L + ++ + L GL L E+ L N L + P + L+ L+L
Sbjct: 82 --LSRLEQLWLPYNALSELSALMLRGLRRLRELRLPGNRLVTFPWAALRDTPQLQLLDLQ 139
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV 191
N +S + A F+ L LD+S ++L + E L++ G LS R
Sbjct: 140 ANRLSTLPPEAAHFLENLTFLDLSNNQLMRLPEELLDVWAHLKT----GPFLSGHHAR-- 193
Query: 192 EPLLKLMMIELHDNPWVCDCNMRSIKM----WLADKKN-VPVQPACTGPERLSGKVFSDL 246
+++ L DNPWVCDC + + W++ + + C P L+G FS L
Sbjct: 194 ------LILGLQDNPWVCDCRLYDLVHLLDGWVSSNLIFIEARLRCASPRSLAGVAFSQL 247
Query: 247 HADDFACK-PEIRMDSRYVEAVSSENATVV--CRVDSIPPAAISWYW-NGRLLLNNTAFS 302
C+ PE+R + +S +TV+ C IP +SW NGR L N T
Sbjct: 248 ELRK--CQSPELRPGVTSI--ISPLGSTVLLRCGATGIPGPEMSWRRANGRPL-NGTV-- 300
Query: 303 SYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+Q + + + L L DSG + C A+N G ++ +L VT
Sbjct: 301 -HQEV----SSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGASETLISLIVT 347
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 444 SYHSTEMISPNGQLPNKTLHSVIN--ISNPDLINDTRKP-------EGLSPE 486
+YHS ++ Q N T SV+ + D+ T +P EGL+P+
Sbjct: 441 TYHSVSLVWKAPQAGNTTAFSVLYAVFGHRDMRRMTVEPGKTSVTIEGLAPK 492
>UNIPROTKB|Q6PJG9 [details] [associations]
symbol:LRFN4 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 4" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:BC000207 EMBL:BC015581 EMBL:BC027475
EMBL:BC094813 EMBL:AB209005 IPI:IPI00172530 RefSeq:NP_076941.2
UniGene:Hs.209979 UniGene:Hs.714189 ProteinModelPortal:Q6PJG9
SMR:Q6PJG9 STRING:Q6PJG9 PhosphoSite:Q6PJG9 DMDM:62286924
PaxDb:Q6PJG9 PRIDE:Q6PJG9 Ensembl:ENST00000309602 GeneID:78999
KEGG:hsa:78999 UCSC:uc001ojq.1 CTD:78999 GeneCards:GC11P066625
HGNC:HGNC:28456 MIM:612810 neXtProt:NX_Q6PJG9 PharmGKB:PA134922153
eggNOG:NOG246097 InParanoid:Q6PJG9 KO:K16357 OMA:PHGGNGS
OrthoDB:EOG4GTKCM PhylomeDB:Q6PJG9 GenomeRNAi:78999 NextBio:67607
ArrayExpress:Q6PJG9 Bgee:Q6PJG9 CleanEx:HS_LRFN4
Genevestigator:Q6PJG9 GermOnline:ENSG00000173621 Uniprot:Q6PJG9
Length = 635
Score = 218 (81.8 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 88/346 (25%), Positives = 147/346 (42%)
Query: 36 DKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + +T ++D+ S N + + AF L +L+ L L + ++ +G
Sbjct: 57 DNFIQALGPPDFRNMTGLVDLTLSRNAITRIGARAF--GDLESLRSLHLDGNRLVELGTG 114
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
+L G NL + LS N L I F + L DL+L+ N + ++ +P L L
Sbjct: 115 SLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLSYNNLRQVPWAGIGAMPALHTL 174
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF---PV----RSVEPLLKLMMIELHDN 205
++ + ++ + P AF L + L NRL+ P+ R E +++ N
Sbjct: 175 NLDHNLIDALPPGAFAQLGQLSRLDLTSNRLATLAPDPLFSRGRDAEASPAPLVLSFSGN 234
Query: 206 PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDSRYV 264
P C+C + +WL C P L+G+ F + +F+C+P I ++ +
Sbjct: 235 PLHCNCEL----LWLRRLARPDDLETCASPPGLAGRYFWAVPEGEFSCEPPLIARHTQRL 290
Query: 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ + AT+ CR P + W L+ N SS R F G E + +T
Sbjct: 291 WVLEGQRATLRCRALGDPAPTMHWVGPDDRLVGN---SSRARAF--PNGTLE----IGVT 341
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFLGGGHING 370
A D+G + C+A N AG A A L+V + LP G G
Sbjct: 342 GA--GDAGGYTCIATNPAGEATARVELRV----LALPHGGNSSAEG 381
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 51/191 (26%), Positives = 88/191 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C+ C + L+ +P + + L ++ N +Q L FR +
Sbjct: 17 CPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVE-LRLADNFIQALGPPDFRN--MTG 73
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R I +I + A L +L + L N L + + + + L+ L L+ N +
Sbjct: 74 LVDLTLSRNAITRIGARAFGDLESLRSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLG 133
Query: 137 KIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK-SLESIKLNGNRLSHFPVRSVEPL 194
+I GAF F+ L LD+S + L + P A GA +L ++ L+ N + P + L
Sbjct: 134 RIAPGAFDDFLESLEDLDLSYNNLRQV-PWAGIGAMPALHTLNLDHNLIDALPPGAFAQL 192
Query: 195 LKLMMIELHDN 205
+L ++L N
Sbjct: 193 GQLSRLDLTSN 203
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 215 (80.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 57/198 (28%), Positives = 97/198 (48%)
Query: 54 LDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+S N NL+ + FR GL++L L L RC + ++ +G GL +L + L DN L
Sbjct: 110 LDLSDNTNLKSINPVTFR--GLVHLHTLHLDRCGLMELSTGLFRGLFSLQYLYLQDNNLQ 167
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
++ TF + L L L N I + + F+ + L +L + ++R+ + +F
Sbjct: 168 NLLDDTFIDLANLTYLFLHGNKIKSLSENVFRGLINLDRLLLHQNRVSLVHRRSFHDLGK 227
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
+ ++ L N L+ ++ PL+ L + L+ N W+CDC RS+ W K + C
Sbjct: 228 VMTLYLFNNNLTVLTGETMAPLVSLQYLRLNGNQWICDCQARSLWNWFKQFKGSSSELEC 287
Query: 233 TGPERLSGKVFSDLHADD 250
P L+G+ L + D
Sbjct: 288 HLPPHLAGRDLKRLQSSD 305
Score = 183 (69.5 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 53/191 (27%), Positives = 94/191 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C+C + K + C+ + L IP E P +Q + + N + ++ +F
Sbjct: 27 CPGACVC-YSEPKITISCQQQGLTAIPTEIPIQ--SQRIFLHNNKITLVRSTSF--TSCR 81
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNP 134
N+ L++ +I I+ GA GL L E+DLSDN L SI +TF+ + L L+L R
Sbjct: 82 NMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVTFRGLVHLHTLHLDRCG 141
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+ ++ G F+ + L L + ++ L+++ + F +L + L+GN++ L
Sbjct: 142 LMELSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLFLHGNKIKSLSENVFRGL 201
Query: 195 LKLMMIELHDN 205
+ L + LH N
Sbjct: 202 INLDRLLLHQN 212
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 218 (81.8 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 61/194 (31%), Positives = 99/194 (51%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
VL++ GN + L + F LL +++L L IG +D A DGL+ L + L DN LT
Sbjct: 134 VLNLRGNQISELHQGTF--TPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALT 191
Query: 113 SIPS-LTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
++P + FQ++ L +L L N + I+ AFQ + GL +L++ + L +IS ++F G +
Sbjct: 192 TVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQ 251
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
L + L+ NRL P + L++L + L N + + M L K + V A
Sbjct: 252 ELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDF--EVISEGAFMGLKQLKRLEVNGA 309
Query: 232 CTGPERLSGKVFSD 245
++G FSD
Sbjct: 310 LRLKRVMTG-AFSD 322
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/213 (26%), Positives = 94/213 (44%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
LT+ L++ G +L+ + ++F GL L+ L L+ + +I S L L L ++ L N
Sbjct: 229 LTR-LELKGASLRNISHDSF--LGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQN 285
Query: 110 LLTSIPSLTFQSVRFLRDLNL-ARNPISKIEKGAFQFVPGLVKLDMSESR-LEHISPEAF 167
I F ++ L+ L + + ++ GAF L L++S ++ L + A
Sbjct: 286 DFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGAL 345
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD---KK 224
+G L+ + L N L+ + P L ++L +NP CDC + MWL + K
Sbjct: 346 SGLSQLKHVVLKANALTSL-AEGLFPWKDLQTLDLSENPLSCDCRV----MWLHNLLVAK 400
Query: 225 NVPVQPA----CTGPERLSGKVFSDLHADDFAC 253
N C PERL G+ L+ C
Sbjct: 401 NASQDDVSELLCEFPERLRGESLRHLNPAMMGC 433
Score = 132 (51.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 34/130 (26%), Positives = 66/130 (50%)
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
++Q+L + I IDS ++ L +DLS N L +IP TF + L++++L N I
Sbjct: 60 SIQRLVIKSNKIKTIDS-SIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKI 118
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+I F + + L++ +++ + FT +E + L NR+ + ++ + L
Sbjct: 119 GQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLS 178
Query: 196 KLMMIELHDN 205
+L ++ L DN
Sbjct: 179 QLRILYLDDN 188
Score = 130 (50.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C ++C + L +P A + Q L + N ++ + A L
Sbjct: 30 CPPGCQCD--DNTLVVQCGEGQLDVLPIALNPSI-QRLVIKSNKIKTIDSSIQFYAELTF 86
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L+ H+ I L E+ L+ N + I + TF + + LNL N IS
Sbjct: 87 LD---LSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQIS 143
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
++ +G F + + +L++ E+R+ ++ P+AF G L + L+ N L+ P
Sbjct: 144 ELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVP 194
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 218 (81.8 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 57/154 (37%), Positives = 84/154 (54%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
VL++ GN + L F + ++ L +L L + I ID ALDGL NL + L DN LT
Sbjct: 147 VLNLRGNLIAELEYRTF--SPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLT 204
Query: 113 SIPS-LTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
++P LTFQ++ L +L L N I GAFQ + GL +LD+ + L +IS +A G
Sbjct: 205 TVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLV 264
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
SL + L+ NRL P + + L +L + + N
Sbjct: 265 SLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQN 298
Score = 168 (64.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 49/151 (32%), Positives = 76/151 (50%)
Query: 36 DKFLITIP-EAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDS 92
D L T+P E L + ++ N+ +P AF+ L L +L L + I
Sbjct: 200 DNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQ--DLKGLTRLDLRGAGLHNISG 257
Query: 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
AL GL +L +DLSDN L +IP+ FQ + L LN+ +N I GAF + L L
Sbjct: 258 DALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHL 317
Query: 153 DMSES-RLEHISPEAFTGAKSLESIKLNGNR 182
+++ + RL + AF+G +LE + L+ N+
Sbjct: 318 ELTGAQRLRRVESGAFSGNTNLEHLNLSSNK 348
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 53/185 (28%), Positives = 89/185 (48%)
Query: 40 ITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDG 97
+TIP +L + LD+ G L + +A + GL++L+ L L+ + I + A
Sbjct: 229 MTIPGGAFQDLKGLTRLDLRGAGLHNISGDALK--GLVSLRFLDLSDNRLPAIPTAAFQR 286
Query: 98 LTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA-RNPISKIEKGAFQFVPGLVKLDMSE 156
L L ++++ N I S F +R LR L L + ++E GAF L L++S
Sbjct: 287 LGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSS 346
Query: 157 SR-LEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRS 215
++ L +S A G L ++ L N+LS + P L ++L +NP+ CDC +
Sbjct: 347 NKQLNELSSIALGGLPHLSTVVLKANQLSSLD-EGLVPWADLQTLDLSENPFECDCRL-- 403
Query: 216 IKMWL 220
+WL
Sbjct: 404 --LWL 406
Score = 139 (54.0 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 48 SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
++LT LD+S N++ +P+ +F A LQ+L L IGQ+ + GL+ + ++L
Sbjct: 95 AQLT-FLDLSFNDMLTIPERSF--AYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLR 151
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPE-A 166
NL+ + TF + L +LNL +N IS I+ A + L L + ++ L + E
Sbjct: 152 GNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELT 211
Query: 167 FTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
F SL + L N P + + L L ++L
Sbjct: 212 FQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDL 247
>UNIPROTKB|Q9ULH4 [details] [associations]
symbol:LRFN2 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030054 GO:GO:0045211
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HOGENOM:HOG000237343 HOVERGEN:HBG052352 EMBL:AB033072 EMBL:AK291474
EMBL:AL591063 EMBL:BC142616 IPI:IPI00008107 RefSeq:NP_065788.1
UniGene:Hs.250015 ProteinModelPortal:Q9ULH4 SMR:Q9ULH4
STRING:Q9ULH4 PhosphoSite:Q9ULH4 DMDM:62286951 PaxDb:Q9ULH4
PRIDE:Q9ULH4 Ensembl:ENST00000338305 GeneID:57497 KEGG:hsa:57497
UCSC:uc003oph.1 CTD:57497 GeneCards:GC06M040406 HGNC:HGNC:21226
HPA:HPA013653 MIM:612808 neXtProt:NX_Q9ULH4 PharmGKB:PA134913285
eggNOG:NOG311542 InParanoid:Q9ULH4 KO:K16355 OMA:HWVAPDD
OrthoDB:EOG469QT6 ChiTaRS:LRFN2 GenomeRNAi:57497 NextBio:63812
Bgee:Q9ULH4 CleanEx:HS_LRFN2 Genevestigator:Q9ULH4
GermOnline:ENSG00000156564 Uniprot:Q9ULH4
Length = 789
Score = 218 (81.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 83/339 (24%), Positives = 142/339 (41%)
Query: 38 FLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDG 97
F+I I + +T ++D++ + I + F L +L+ L L + + L G
Sbjct: 63 FIIHISRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRG 122
Query: 98 LTNLIEIDLSDNLLTSIPSLTFQSVRF-LRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L NL + +++N L I F+ L DL+L+ N + + + + + L +L +
Sbjct: 123 LVNLQHLIVNNNQLGGIADEAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDH 182
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFP-----VRS------VEPLLKLMMIELHDN 205
+ L+HI+ F + L + L NRL P RS P + N
Sbjct: 183 NLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQASALTATPFAPPLSFSFGGN 242
Query: 206 PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDSRYV 264
P C+C + +WL + C P L G+ F + ++F C+P I + +
Sbjct: 243 PLHCNCEL----LWLRRLERDDDLETCGSPGGLKGRYFWHVREEEFVCEPPLITQHTHKL 298
Query: 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ + AT+ C+ P I W L+ N++ R V + G + + +T
Sbjct: 299 LVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSS-----RTAVYDNGTLD----IFIT 349
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFL 363
+Q DSG F C+A N AG A A + + V LP L
Sbjct: 350 TSQ--DSGAFTCIAANAAGEATAMVEVSI----VQLPHL 382
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/191 (26%), Positives = 85/191 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
CP C+C+ C K L+ +P P+ + V L + GN + + ++ F A +
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVP--PDIDRRTVELRLGGNFIIHISRQDF--ANMT 76
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L L L+R I I + L +L + L N L S+ T + + L+ L + N +
Sbjct: 77 GLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQL 136
Query: 136 SKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
I AF+ F+ L LD+S + L + ++ +L + L+ N L H + L
Sbjct: 137 GGIADEAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADL 196
Query: 195 LKLMMIELHDN 205
KL ++L N
Sbjct: 197 QKLARLDLTSN 207
>RGD|1303079 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0007156
"homophilic cell adhesion" evidence=IPI] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IPI] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0030424 "axon"
evidence=IEA] [GO:0042552 "myelination" evidence=IEP] [GO:0050772
"positive regulation of axonogenesis" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1303079 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042552 GO:GO:0050772 GO:GO:0007157 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57463
eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237729
IPI:IPI00201253 RefSeq:NP_996764.1 UniGene:Rn.116338
ProteinModelPortal:Q80ZD7 STRING:Q80ZD7 GeneID:295365
KEGG:rno:295365 UCSC:RGD:1303079 InParanoid:Q80ZD7 NextBio:639469
ArrayExpress:Q80ZD7 Genevestigator:Q80ZD7 Uniprot:Q80ZD7
Length = 493
Score = 214 (80.4 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 75/270 (27%), Positives = 122/270 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C+C + C + L +P++ T +LD+S NNL L E + L N
Sbjct: 34 CPANCLC----ASNILSCSKQQLPNVPQSLPG-YTALLDLSHNNLSRLKAE-WTPTRLTN 87
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+ H+ I S A + NL +DLS N L ++ F ++ L L L N I
Sbjct: 88 LHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSGLQALEVLLLYNNHIV 147
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKL---NGNRLSHFPVRSVEP 193
+++ AF+ + L KL +S++ + E A L + L + N+L P+ ++
Sbjct: 148 VVDRNAFEDMAQLQKLYLSQNMISRFPLELIKDANRLPKLTLLDLSSNKLKKLPLTDLQK 207
Query: 194 LLKLMM--IELHDNPWVCDCNMRSI-KMW----LADKKNVPVQPACTGPERLSGKVFSDL 246
L + + LH+NP CDC + + W L+ + C ++L VFS
Sbjct: 208 LPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCVHSKKLHN-VFS-- 264
Query: 247 HADDFACKPEIRMDSRYVEAVSSENATVVC 276
D F C E + +S + EA + T+ C
Sbjct: 265 -LDFFNCS-EYK-ESAW-EAHLGDTLTITC 290
>RGD|1560165 [details] [associations]
symbol:Lrrc17 "leucine rich repeat containing 17" species:10116
"Rattus norvegicus" [GO:0005615 "extracellular space"
evidence=IEA;ISO] [GO:0045671 "negative regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0001649 "osteoblast
differentiation" evidence=ISO] [GO:0033687 "osteoblast
proliferation" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
RGD:1560165 GO:GO:0005615 InterPro:IPR000483 SMART:SM00082
EMBL:CH474020 GO:GO:0045671 GO:GO:0048539
GeneTree:ENSGT00700000104028 CTD:10234 eggNOG:NOG263968
HOGENOM:HOG000113365 HOVERGEN:HBG052344 OMA:PIQTLDC
OrthoDB:EOG4MCX08 EMBL:BC079098 IPI:IPI00189939
RefSeq:NP_001020326.1 UniGene:Rn.207235 Ensembl:ENSRNOT00000017103
GeneID:502715 KEGG:rno:502715 InParanoid:Q6AYD0 NextBio:712245
Genevestigator:Q6AYD0 Uniprot:Q6AYD0
Length = 446
Score = 173 (66.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 42/114 (36%), Positives = 58/114 (50%)
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L+L+ N IS++ F+ V L KL++S + LE I P AF G LE + L+ N L F
Sbjct: 278 LDLSYNKISQLRPKEFEDVHELKKLNLSSNGLEFIDPAAFLGLIHLEELDLSNNSLQSFD 337
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-CTGPERLSG 240
+E L L ++ L DNPW CD ++ + WL NV C PE G
Sbjct: 338 YGVLEDLYFLKLLWLRDNPWRCDYSIHYLYYWLKHHYNVHYNGLECKTPEEYKG 391
Score = 130 (50.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 42/156 (26%), Positives = 66/156 (42%)
Query: 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-- 187
LARN I ++ F L LD+ ++ + I EAF G L ++ L N++
Sbjct: 93 LARNKIRVLKNNMFSKFKRLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEE 152
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSI--KMWLADKKNVPVQPACTGPERLSGKVFSD 245
V PLL + L+DNPW C C + ++ + + +N+ C P L K
Sbjct: 153 VFIYTPLLSYL--RLYDNPWHCACELETLVSMLQIPRNRNLGNYAKCGSPPALRNKKLLQ 210
Query: 246 LHADDFACKPEI-RMDSRYVEAVSSENATVVCRVDS 280
L + + E R+D + VS A + DS
Sbjct: 211 LKPQELCDEEEKERLDP--IPQVSGVPAVIRPEADS 244
Score = 86 (35.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 29 KQWMECRDKFLI-TIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHI 87
+++++C+++ L+ +P+ P+ +L +L ++ N +++L F + L+ L L + I
Sbjct: 67 EKYLDCQERKLVYVLPDWPQ-DLLHML-LARNKIRVLKNNMFSK--FKRLKSLDLQQNEI 122
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+I+S A GL L + L N + + F L L L NP
Sbjct: 123 SKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNP 169
Score = 80 (33.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 125 LRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLS 184
++ L+ R + K+ P +VKLD+S +++ + P+ F L+ + L+ N L
Sbjct: 254 IQTLDCKRKELKKVPNN---IPPNIVKLDLSYNKISQLRPKEFEDVHELKKLNLSSNGLE 310
Query: 185 HFPVRSVEPLLKLMMIELHDN 205
+ L+ L ++L +N
Sbjct: 311 FIDPAAFLGLIHLEELDLSNN 331
Score = 49 (22.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/65 (32%), Positives = 28/65 (43%)
Query: 517 DKTPIIDGVS--IGGELDDNYPPDYGLPI--VGQGQNEL--LPNNIHPNAKTLRVWQRGV 570
D P + GV I E D +Y PI + + EL +PNNI PN L + +
Sbjct: 226 DPIPQVSGVPAVIRPEADSTLCHNYVFPIQTLDCKRKELKKVPNNIPPNIVKLDLSYNKI 285
Query: 571 PVLPP 575
L P
Sbjct: 286 SQLRP 290
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 213 (80.0 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
LT V + N ++ + + + GL L+ L L I + A G + + L+DN
Sbjct: 177 LTHVY-LERNRIEAVAYNSLQ--GLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDN 233
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
L++ +P +F +R L+ LNL N + + F+ + L L + +R+ +I AF
Sbjct: 234 LISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFEN 293
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQ 229
SL S+ LN N L+ P +P+ L + L NPW CDC + +K W+ + + V
Sbjct: 294 LTSLVSLHLNSNNLTTLPFSVFQPVYFLGRLYLFRNPWECDCRIEWLKEWMENYRLVRDI 353
Query: 230 PACTGPERLSGKVFSDLHAD 249
P C P ++G D+ D
Sbjct: 354 P-CASPSSVAGIDLMDVLYD 372
Score = 159 (61.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 53/190 (27%), Positives = 90/190 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C+C + + C L IP E + + ++ N+++ L + AF L +
Sbjct: 25 CPANCVCTQERSCSVL-CDRAGLGQIPSEFPCEASSI-NLDKNSIKFLSERAF--GTLPS 80
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN-LLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L +I I GA GL +L E+ ++ N + + + TF ++R L L+LA +
Sbjct: 81 LKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLHTRTFTALRRLVKLDLADCNL 140
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
I F +P L +L ++ I P A G ++L + L NR+ S++ L
Sbjct: 141 FNIPDRIFIELPSLQELFCFQNNFRRI-PGAIRGMENLTHVYLERNRIEAVAYNSLQGLT 199
Query: 196 KLMMIELHDN 205
KL + L DN
Sbjct: 200 KLKYLNLQDN 209
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 32 MECRDKFLITIPEAPESELTQVLDMS--GNNLQILPKEAFRRAGLLNLQKLFLARCHIGQ 89
++ D L IP+ EL + ++ NN + +P A R G+ NL ++L R I
Sbjct: 133 LDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRIPG-AIR--GMENLTHVYLERNRIEA 189
Query: 90 IDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGL 149
+ +L GLT L ++L DN + + FQ R + L L N IS++ + +F + L
Sbjct: 190 VAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCL 249
Query: 150 VKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
L++ + L ++S F LE + L+ NR+++ + E L L+ + L+ N
Sbjct: 250 KMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNSN 305
Score = 131 (51.2 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 39/153 (25%), Positives = 78/153 (50%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARC-HIGQIDSGALDGLTNLIEIDLSDNLLT 112
L ++ NN+ + AF+ GL +L +L +A +I + + L L+++DL+D L
Sbjct: 84 LSLNHNNISFITPGAFK--GLPSLTELKMAHNEYIRYLHTRTFTALRRLVKLDLADCNLF 141
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+IP F + L++L +N +I GA + + L + + +R+E ++ + G
Sbjct: 142 NIPDRIFIELPSLQELFCFQNNFRRIP-GAIRGMENLTHVYLERNRIEAVAYNSLQGLTK 200
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
L+ + L NR++ R+ + K+ + L+DN
Sbjct: 201 LKYLNLQDNRINVVHERAFQGCRKMEYLYLNDN 233
Score = 42 (19.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 286 ISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLV 322
+S W L+ + RI IE+G +E +SLV
Sbjct: 262 VSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLV 298
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 213 (80.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 59/204 (28%), Positives = 95/204 (46%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
GL +L+ L L I I A L L L+DNLL +P F+ + L+ LNL
Sbjct: 200 GLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGG 259
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N ++ + K F + L L + +RL +I +F SL ++ LN N L+ P +
Sbjct: 260 NLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVFQ 319
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDL---HAD 249
P+ + + L NPW C C++ ++ W+ K V P C P ++G S++ H +
Sbjct: 320 PIYFIGRLYLFRNPWECTCDLEWLREWMESYKLVRDIP-CASPSSVAGLDLSEVVFAHLN 378
Query: 250 DFAC--KPEIRMDSRYVEAVSSEN 271
C PE+ M + + + EN
Sbjct: 379 S-TCLDPPELNMTTSLPDYPTVEN 401
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 59 NNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLT 118
NN + +P A R G+ NL ++L R I + +L GLT+L ++L +N + I
Sbjct: 165 NNFRRVPG-ALR--GMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEA 221
Query: 119 FQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKL 178
F+ + L + L N + + + AF+ + L L++ + L ++S F+ LE + L
Sbjct: 222 FKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYL 281
Query: 179 NGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ NRLS+ S E L L+ + L+ N
Sbjct: 282 DRNRLSYIEDGSFENLTSLITLHLNSN 308
Score = 126 (49.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP TC C + + C ++ +P+ E + + ++ N+L+ L + AF L +
Sbjct: 28 CPPTCTCTQEKSCSVL-CDHVNMMDLPKEFPCEASSI-NLDKNSLKFLSERAF--GTLPS 83
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN-LLTSIPSLTFQSVRFLRDLNLARNPI 135
L+ L L +I I GA GL NL+E+ ++ N + + + TF +++ L L+L+ +
Sbjct: 84 LKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSDCNL 143
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ F L +L ++ + P A G ++L + L N++ S+ L
Sbjct: 144 FNMPDRIFLEQITLKELLCFQNNFRRV-PGALRGMENLTHVYLERNKIEAVAYNSLLGLT 202
Query: 196 KLMMIELHDN 205
L + L +N
Sbjct: 203 SLKYLNLQEN 212
Score = 42 (19.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 286 ISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLV 322
+S W L+ + R+ IE G +E +SL+
Sbjct: 265 VSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLI 301
>UNIPROTKB|Q2HJ31 [details] [associations]
symbol:LRRC17 "Leucine rich repeat containing 17"
species:9913 "Bos taurus" [GO:0048539 "bone marrow development"
evidence=IEA] [GO:0045671 "negative regulation of osteoclast
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0045671 GO:GO:0048539
GeneTree:ENSGT00700000104028 CTD:10234 eggNOG:NOG263968
HOGENOM:HOG000113365 HOVERGEN:HBG052344 OMA:PIQTLDC
OrthoDB:EOG4MCX08 EMBL:DAAA02010505 EMBL:BC113338 EMBL:BT030519
IPI:IPI00704007 RefSeq:NP_001071618.1 UniGene:Bt.4886
Ensembl:ENSBTAT00000033775 GeneID:777690 KEGG:bta:777690
InParanoid:Q2HJ31 NextBio:20924262 Uniprot:Q2HJ31
Length = 441
Score = 171 (65.3 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 39/114 (34%), Positives = 59/114 (51%)
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L+L+ N I+++ F+ V L KL++S + ++ I P AF G LE + L+ N L +F
Sbjct: 273 LDLSHNKINQLRPKEFEDVHELKKLNLSSNGIQFIDPAAFLGLTHLEELDLSNNSLQNFD 332
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-CTGPERLSG 240
+E L L ++ L +NPW CD N+ + WL NV C PE G
Sbjct: 333 YGVLEDLYFLKLLWLRENPWRCDYNIHYLYYWLKHHYNVHYNGLECKMPEEYKG 386
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 40/155 (25%), Positives = 65/155 (41%)
Query: 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-- 187
LARN I ++ F L LD+ ++ + I EAF G L ++ L N++
Sbjct: 88 LARNKIRILKNSMFSKFKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEE 147
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSI--KMWLADKKNVPVQPACTGPERLSGKVFSD 245
V PLL + L+DNPW C C M ++ + + +N+ C P+ L K
Sbjct: 148 VFIYTPLLSYL--RLYDNPWHCTCEMETLISMLQIPRNRNLGNYAKCESPQELKNKKLRQ 205
Query: 246 LHADDFACKPEIRMDSRYVEAVSSENATVVCRVDS 280
+ ++ C E +S + + VDS
Sbjct: 206 IKSEQL-CNEEESEQLEPRPQLSGKPPVIKTEVDS 239
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 39/106 (36%), Positives = 58/106 (54%)
Query: 30 QWMECRDKFLITIPEAPESELTQVLDMSGNNL-QILPKEAFRRAGLLNLQKLFLARCHIG 88
Q ++CR K L +P ++ + LD+S N + Q+ PKE F + L+KL L+ I
Sbjct: 250 QTLDCRRKELKKVPNNIPPDIVK-LDLSHNKINQLRPKE-FE--DVHELKKLNLSSNGIQ 305
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
ID A GLT+L E+DLS+N L + + + FL+ L L NP
Sbjct: 306 FIDPAAFLGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRENP 351
Score = 87 (35.7 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 29 KQWMECRDKFLI-TIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHI 87
+++++C+++ L+ +P+ P+ +L +L ++ N ++IL F + L+ L L + I
Sbjct: 62 EKYLDCQERKLVYVLPDWPQ-DLLHML-LARNKIRILKNSMFSK--FKKLKSLDLQQNEI 117
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+I+S A GL L + L N + + F L L L NP
Sbjct: 118 SKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNP 164
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 214 (80.4 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 55/205 (26%), Positives = 94/205 (45%)
Query: 42 IPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+P +L Q+ L + GN+L+ L F + NL++L+L HI + L
Sbjct: 260 LPPGIFMQLPQLNKLTLFGNSLRELSPGVF--GPMPNLRELWLYNNHITSLADNTFSHLN 317
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L + LS N LT I F + LR+L+L N + ++ F+ + L + + +RL
Sbjct: 318 QLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRL 377
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ F L +I+L N L + P+ + L+ L + L+DNPW CD ++ + W
Sbjct: 378 RQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNLCELRLYDNPWRCDSDILPLHNW 437
Query: 220 LADKK---NVPVQPACTGPERLSGK 241
L + P C+ P + G+
Sbjct: 438 LLLNRARLGTDTLPVCSSPANVRGQ 462
Score = 177 (67.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 51/169 (30%), Positives = 79/169 (46%)
Query: 42 IPEAPESELTQV-----LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
I E PE+ + L M N L + AFR G +L+ L LA + +
Sbjct: 65 ITELPENLFLNISALIALKMEKNELSTIMPGAFRNLG--SLRYLSLANNKLRMLPIRVFQ 122
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
+ NL + LS+N L I F LR+L L N + I + AF + GL KL++
Sbjct: 123 DVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGR 182
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ H+SP F +L+ ++L+ NRLS P+ + + L L + L +N
Sbjct: 183 NSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQEN 231
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + + +EC ++ +P P L + ++ LP+ F L
Sbjct: 25 CPSECTCS-RASQ--VECTGARIVAMP-TPLPWNAMSLQVVNTHITELPENLFLNISALI 80
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
K+ + + I GA L +L + L++N L +P FQ V L L L+ N +
Sbjct: 81 ALKM--EKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLV 138
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+I+ F L +L + + LE I EAF L + L N +H R + L
Sbjct: 139 QIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGN 198
Query: 197 LMMIELHDN 205
L ++ LH+N
Sbjct: 199 LQVLRLHEN 207
Score = 165 (63.1 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L+ I A S+ + + L + GNNL+ +P+EAF L+ L KL L R +
Sbjct: 137 LVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDH--LVGLTKLNLGRNSFTHLSPRLFQ 194
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L NL + L +N L+ IP TF ++ L++L L N I + G F L +L +S
Sbjct: 195 HLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSN 254
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ + + P F L + L GN L P+ L + L++N
Sbjct: 255 NHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNN 303
Score = 150 (57.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 52/181 (28%), Positives = 75/181 (41%)
Query: 27 GGKQWMECRDKFLITIPEAPESEL--TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLAR 84
G Q + + L IP L Q L + N + L F NLQ+L+L+
Sbjct: 197 GNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNR--NLQRLYLSN 254
Query: 85 CHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ 144
HI Q+ G L L ++ L N L + F + LR+L L N I+ + F
Sbjct: 255 NHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFS 314
Query: 145 FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHD 204
+ L L +S ++L +ISP AF G +L + L+ N L L L I L
Sbjct: 315 HLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQS 374
Query: 205 N 205
N
Sbjct: 375 N 375
Score = 148 (57.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 40/130 (30%), Positives = 61/130 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++ N L++LP F+ NL+ L L+ + QI +NL E+ L N L S
Sbjct: 106 LSLANNKLRMLPIRVFQDVN--NLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLES 163
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
IP F + L LNL RN + + FQ + L L + E+RL I F +L
Sbjct: 164 IPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNL 223
Query: 174 ESIKLNGNRL 183
+ + L N++
Sbjct: 224 QELALQENQI 233
>ZFIN|ZDB-GENE-060616-45 [details] [associations]
symbol:lrit1b "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1b" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-060616-45 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 HOGENOM:HOG000063714
HOVERGEN:HBG108105 EMBL:CABZ01112650 EMBL:BC117586 IPI:IPI00607359
RefSeq:NP_001036218.1 UniGene:Dr.84695 Ensembl:ENSDART00000127706
GeneID:553432 KEGG:dre:553432 CTD:553432 InParanoid:Q1ED19
NextBio:20880185 Uniprot:Q1ED19
Length = 654
Score = 210 (79.0 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 77/295 (26%), Positives = 127/295 (43%)
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+ KL + + + +I S L++L + +S N L+SI TF+ + L +L + N
Sbjct: 59 LDASKLRIEKTSLSRISSAPFQQLSSLEYLWISFNSLSSISPDTFRGLYALDELRMDGNV 118
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR----- 189
++ +P L LD+ +++ I EA ++L + L+ N L+ P
Sbjct: 119 LTSFPWECLLDMPSLRLLDLHNNKISSIPAEATLYIRNLTYLDLSSNSLTTVPPEVLMSW 178
Query: 190 -SVEPLLKL----MMIELHDNPWVCDCNMRSI----KMWLADKKNVPVQPACTGPERLSG 240
S +P L M++ LHDNPW CDC + + K + + C PE LSG
Sbjct: 179 FSPKPPLDAEGSRMILGLHDNPWQCDCRLFDLVQFQKFPSSSVAFIDTGLRCAEPESLSG 238
Query: 241 KVFSDLHADDFACK-PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNT 299
+FSD A+ C+ P + V + N + C +P +SW +N T
Sbjct: 239 VLFSD--AELRRCQIPRVHTAVARVRSSIGNNVLLRCGTIGVPIPELSWARADGKPMNGT 296
Query: 300 AFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+ +I S L + DSG++ C A N G ADA +L ++
Sbjct: 297 VQQEVSKEGIIW-------SILSVPAVSYRDSGKYVCKATNFVGSADAIISLVIS 344
Score = 196 (74.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 75/283 (26%), Positives = 121/283 (42%)
Query: 17 CPSTCICKWK----GGK-QWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRR 71
CP+ C C + G K + + C D L IP+ + ++ L + +L + F++
Sbjct: 23 CPAQCSCFYHKLSDGSKSRSVLCNDPDLTDIPDNFPLDASK-LRIEKTSLSRISSAPFQQ 81
Query: 72 AGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
L +L+ L+++ + I GL L E+ + N+LTS P + LR L+L
Sbjct: 82 --LSSLEYLWISFNSLSSISPDTFRGLYALDELRMDGNVLTSFPWECLLDMPSLRLLDLH 139
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLES-IKLNGNRLSHFPVRS 190
N IS I A ++ L LD+S + L + PE S + + G+R
Sbjct: 140 NNKISSIPAEATLYIRNLTYLDLSSNSLTTVPPEVLMSWFSPKPPLDAEGSR-------- 191
Query: 191 VEPLLKLMMIELHDNPWVCDCNMRSI----KMWLADKKNVPVQPACTGPERLSGKVFSDL 246
M++ LHDNPW CDC + + K + + C PE LSG +FSD
Sbjct: 192 -------MILGLHDNPWQCDCRLFDLVQFQKFPSSSVAFIDTGLRCAEPESLSGVLFSD- 243
Query: 247 HADDFACK-PEIRMDSRYVEAVSSENATVVCRVDSIPPAAISW 288
A+ C+ P + V + N + C +P +SW
Sbjct: 244 -AELRRCQIPRVHTAVARVRSSIGNNVLLRCGTIGVPIPELSW 285
Score = 51 (23.0 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 503 IRQPTNSELGFDSNDKTPIIDGVSIGGELDDNYP-PDYGLPIVGQG-----QNELLPNNI 556
I +P NS G S I+ S+ + P P P VGQ Q ++L NN+
Sbjct: 389 IIEPLNSPQGSSSVQ----IESYSVSADASKLKPKPKPTAPPVGQTEPVALQRDVL-NNL 443
Query: 557 HPNAKTLR 564
PNA +L+
Sbjct: 444 EPNASSLQ 451
>ZFIN|ZDB-GENE-040310-3 [details] [associations]
symbol:rtn4rl1b "reticulon 4 receptor-like 1b"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] ZFIN:ZDB-GENE-040310-3 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000116109 HOVERGEN:HBG063707 KO:K16660
EMBL:BC163592 EMBL:AY263333 IPI:IPI00505158 RefSeq:NP_982347.1
UniGene:Dr.134948 SMR:Q6WZD2 IntAct:Q6WZD2 GeneID:403308
KEGG:dre:403308 CTD:403308 InParanoid:Q6WZD2 NextBio:20816917
Uniprot:Q6WZD2
Length = 478
Score = 212 (79.7 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 59/203 (29%), Positives = 90/203 (44%)
Query: 50 LTQVLDMSGNN-LQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
L + LD+ N L+ L E F GL L L L RC + + + GL NL + L D
Sbjct: 99 LLEELDLGDNRYLRSLSAETFH--GLGRLHALHLYRCGLSALPNNIFQGLRNLQYLYLQD 156
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N L + F + L L L N + + + F+ + L +L + ++L+ + AF
Sbjct: 157 NHLEYLQDDLFVDLHNLSHLFLHGNRLWSLHQNTFRGLGALDRLLLHHNQLQWVDRLAFH 216
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV 228
+ L ++ L N L+ + L L + L+DNPW CDC S+ WL +
Sbjct: 217 DLRRLTTLYLFNNSLTELAGECLTQLPALEYLRLNDNPWECDCKALSLWDWLKKFRGSTS 276
Query: 229 QPACTGPERLSGKVFSDLHADDF 251
C P L+GK L +DF
Sbjct: 277 SVGCVAPAELAGKDLKQLRKEDF 299
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 54/197 (27%), Positives = 87/197 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA--PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP CIC + C+ +++PE P SE + + N + L + F +
Sbjct: 23 CPRHCICYM--APSTVSCQAHNFLSVPEGIPPHSER---IFLQNNKIHRLLQGHFSPTTV 77
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN-LLTSIPSLTFQSVRFLRDLNLARN 133
L++ +I I+ G T L E+DL DN L S+ + TF + L L+L R
Sbjct: 78 T----LWIYSNNITYIEPSTFQGFTLLEELDLGDNRYLRSLSAETFHGLGRLHALHLYRC 133
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
+S + FQ + L L + ++ LE++ + F +L + L+GNRL +
Sbjct: 134 GLSALPNNIFQGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHGNRLWSLHQNTFRG 193
Query: 194 LLKLMMIELHDNP--WV 208
L L + LH N WV
Sbjct: 194 LGALDRLLLHHNQLQWV 210
>UNIPROTKB|F1RP64 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 CTD:114798 OMA:NGLPCPG
GeneTree:ENSGT00680000099775 EMBL:CU076063 RefSeq:XP_001927677.3
Ensembl:ENSSSCT00000010400 GeneID:100152470 KEGG:ssc:100152470
Uniprot:F1RP64
Length = 695
Score = 215 (80.7 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 70/247 (28%), Positives = 113/247 (45%)
Query: 21 CICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNL-QILPKEAFRRAGLLNL 77
C C G ++C K ++ AP S+ + + GN+L ++ P E F A N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLF-LHGNSLTRLFPNE-F--ANFYNA 84
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
L + + +I GA GL + + +++N + S TF + L L N +
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRD 144
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EPLLK 196
I+ GAFQ + L L ++++ + + F + + L GNRL P V E +
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPV-QPACTGPERLSGKVFSDLHADDFACK 254
+ I L DNPW C C++ S+K WL + KN + + C P RL GK ++ D C
Sbjct: 204 IAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVVCEAPTRLQGKDLNETTEQDL-CP 262
Query: 255 PEIRMDS 261
+ R+DS
Sbjct: 263 LKNRVDS 269
Score = 203 (76.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 65/247 (26%), Positives = 107/247 (43%)
Query: 17 CPSTCICKW-KGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C C G M C ++ + ++ + P+ Q L + N + + K F
Sbjct: 340 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHF--VDY 397
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
NL L L +I +++ L +L + + N L ++ F ++ L LN+ N
Sbjct: 398 KNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 457
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
I I G F +P L L ++ + L + + F G SL + L+ N + PV V +
Sbjct: 458 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLDQ 516
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGKVFSDLHADD 250
L ++ I+LH NPW C C + K W A++ V + C P K F L D+
Sbjct: 517 LTSIIQIDLHGNPWECSCTIVPFKQW-AERLGSEVLMSDLKCETPVNFFRKDFMLLSNDE 575
Query: 251 FACKPEI 257
C P++
Sbjct: 576 I-C-PQL 580
>UNIPROTKB|F1MJJ9 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 CTD:114798 OMA:NGLPCPG
GeneTree:ENSGT00680000099775 EMBL:DAAA02033738 IPI:IPI00709451
RefSeq:XP_002691955.1 RefSeq:XP_003582925.1 RefSeq:XP_003586770.1
RefSeq:XP_872893.3 Ensembl:ENSBTAT00000054494 GeneID:615880
KEGG:bta:615880 NextBio:20899841 Uniprot:F1MJJ9
Length = 696
Score = 215 (80.7 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 70/247 (28%), Positives = 113/247 (45%)
Query: 21 CICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNL-QILPKEAFRRAGLLNL 77
C C G ++C K ++ AP S+ + + GN+L ++ P E F A N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLF-LHGNSLTRLFPNE-F--ANFYNA 84
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
L + + +I GA GL + + +++N + S TF + L L N +
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRD 144
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EPLLK 196
I+ GAFQ + L L ++++ + + F + + L GNRL P V E +
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPV-QPACTGPERLSGKVFSDLHADDFACK 254
+ I L DNPW C C++ S+K WL + KN + + C P RL GK ++ D C
Sbjct: 204 IAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVVCEAPTRLQGKDLNETTEQDL-CP 262
Query: 255 PEIRMDS 261
+ R+DS
Sbjct: 263 LKHRVDS 269
Score = 203 (76.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 65/247 (26%), Positives = 107/247 (43%)
Query: 17 CPSTCICKW-KGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C C G M C ++ + ++ + P+ Q L + N + + K F
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHF--VDY 398
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
NL L L +I +++ L +L + + N L ++ F ++ L LN+ N
Sbjct: 399 KNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 458
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
I I G F +P L L ++ + L + + F G SL + L+ N + PV V +
Sbjct: 459 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLDQ 517
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGKVFSDLHADD 250
L ++ I+LH NPW C C + K W A++ V + C P K F L D+
Sbjct: 518 LTSIIQIDLHGNPWECSCTIVPFKQW-AERLGSEVLMSDLKCETPVNFFRKDFMLLSNDE 576
Query: 251 FACKPEI 257
C P++
Sbjct: 577 I-C-PQL 581
>UNIPROTKB|Q96PX8 [details] [associations]
symbol:SLITRK1 "SLIT and NTRK-like protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 MIM:137580 Orphanet:856
EMBL:AB067497 EMBL:AY358289 EMBL:AL355481 EMBL:BC051738
IPI:IPI00102543 RefSeq:NP_443142.1 UniGene:Hs.415478
ProteinModelPortal:Q96PX8 SMR:Q96PX8 STRING:Q96PX8
PhosphoSite:Q96PX8 DMDM:46396997 PaxDb:Q96PX8 PeptideAtlas:Q96PX8
PRIDE:Q96PX8 Ensembl:ENST00000377084 GeneID:114798 KEGG:hsa:114798
UCSC:uc001vlk.3 CTD:114798 GeneCards:GC13M084451 HGNC:HGNC:20297
HPA:HPA012414 MIM:609678 MIM:613229 neXtProt:NX_Q96PX8
PharmGKB:PA134944423 eggNOG:NOG236179 HOGENOM:HOG000290667
HOVERGEN:HBG056407 InParanoid:Q96PX8 OMA:NGLPCPG OrthoDB:EOG428211
PhylomeDB:Q96PX8 GenomeRNAi:114798 NextBio:79234 Bgee:Q96PX8
CleanEx:HS_SLITRK1 Genevestigator:Q96PX8 GermOnline:ENSG00000178235
Uniprot:Q96PX8
Length = 696
Score = 215 (80.7 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 70/247 (28%), Positives = 113/247 (45%)
Query: 21 CICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNL-QILPKEAFRRAGLLNL 77
C C G ++C K ++ AP S+ + + GN+L ++ P E F A N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLF-LHGNSLTRLFPNE-F--ANFYNA 84
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
L + + +I GA GL + + +++N + S TF + L L N +
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRD 144
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EPLLK 196
I+ GAFQ + L L ++++ + + F + + L GNRL P V E +
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPV-QPACTGPERLSGKVFSDLHADDFACK 254
+ I L DNPW C C++ S+K WL + KN + + C P RL GK ++ D C
Sbjct: 204 IAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVVCEAPTRLQGKDLNETTEQDL-CP 262
Query: 255 PEIRMDS 261
+ R+DS
Sbjct: 263 LKNRVDS 269
Score = 203 (76.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 65/247 (26%), Positives = 107/247 (43%)
Query: 17 CPSTCICKW-KGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C C G M C ++ + ++ + P+ Q L + N + + K F
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHF--VDY 398
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
NL L L +I +++ L +L + + N L ++ F ++ L LN+ N
Sbjct: 399 KNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 458
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
I I G F +P L L ++ + L + + F G SL + L+ N + PV V +
Sbjct: 459 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLDQ 517
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGKVFSDLHADD 250
L ++ I+LH NPW C C + K W A++ V + C P K F L D+
Sbjct: 518 LTSIIQIDLHGNPWECSCTIVPFKQW-AERLGSEVLMSDLKCETPVNFFRKDFMLLSNDE 576
Query: 251 FACKPEI 257
C P++
Sbjct: 577 I-C-PQL 581
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 215 (80.7 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 91/324 (28%), Positives = 141/324 (43%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++G NL+ + A GL +L+ L + ++ AL+ + L +DL+ N L
Sbjct: 218 LVLAGMNLREISDYALE--GLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQR 275
Query: 114 IPSLTFQSVRFLRDLNLAR-NPISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFTGAK 171
+ F ++ L++L L + I+K A +P L KLD++ + RL I P AF
Sbjct: 276 VGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLP 335
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNV-PVQP 230
+E++ LN N LS ++VE L L + LH NP CDC +R + + P
Sbjct: 336 QMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQST 395
Query: 231 ACTGPERLSGKVFSDLHADDFA--CKPEI--RMDSRYVEAVSSENATVVCRVDSIPPAAI 286
C P L ++ + C P I R ++ S E+ + CR + P I
Sbjct: 396 LCAEPPDLQRLPVREVPFREMTDHCLPLISPRSFPPSLQVASGESMVLHCRALAEPEPEI 455
Query: 287 SWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIAD 346
W L L T + +R V +G E + A+E+ G + CVA+N G AD
Sbjct: 456 YWVTPAGLRL--TPAHAGRRYRVYPEGTLELRR----VTAEEA--GLYTCVAQNLVG-AD 506
Query: 347 ANFTLQVTYRGVGLPFLGGGHING 370
T+ V VG L G G
Sbjct: 507 TK-TVSVV---VGRALLQPGRDEG 526
Score = 179 (68.1 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 50/153 (32%), Positives = 80/153 (52%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + N L L +F AGL +LQ+L+L + +I A GL+NL+ + L+ NLL +
Sbjct: 122 LHLEENQLTRLEDHSF--AGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRA 179
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I S F+ + L L + N + I F+ + L L ++ L IS A G +SL
Sbjct: 180 IDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSL 239
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
ES+ N+L+ P R++E + L ++L+ NP
Sbjct: 240 ESLSFYDNQLARVPRRALEQVPGLKFLDLNKNP 272
Score = 157 (60.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 49/173 (28%), Positives = 81/173 (46%)
Query: 46 PESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEID 105
P S + + N+L + AG Q L L I ++D L L NL E+D
Sbjct: 43 PRSSYREATTVDCNDLFLTAVPPALPAGT---QTLLLQSNSIVRVDQSELGYLANLTELD 99
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPE 165
LS N + F ++ L L+L N ++++E +F + L +L ++ ++L I+P
Sbjct: 100 LSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPR 159
Query: 166 AFTGAKSLESIKLNGNRLSHFPVRSVE--PLLKLMMIELHDNPWVCDCNMRSI 216
AF+G +L + LN N L R E P L+++MI + + D N R +
Sbjct: 160 AFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPL 212
Score = 141 (54.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/195 (24%), Positives = 84/195 (43%)
Query: 17 CPSTCICK---WKGGKQ------WMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE 67
CP C C+ W + ++C D FL +P A + TQ L + N+ I+ +
Sbjct: 29 CPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAG-TQTLLLQSNS--IVRVD 85
Query: 68 AFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRD 127
L NL +L L++ L L+ + L +N LT + +F + L++
Sbjct: 86 QSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQE 145
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L L N + +I AF + L++L ++ + L I F +LE + + GN++
Sbjct: 146 LYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAIL 205
Query: 188 VRSVEPLLKLMMIEL 202
+ PL L + L
Sbjct: 206 DMNFRPLANLRSLVL 220
Score = 140 (54.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 43/156 (27%), Positives = 75/156 (48%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++L + GN + + FR L NL+ L LA ++ +I AL+GL +L + DN L
Sbjct: 192 EILMIGGNKVDAILDMNFRP--LANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQL 249
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE-SRLEHISPEAFTGA 170
+P + V L+ L+L +NP+ ++ G F + L +L ++ L I A
Sbjct: 250 ARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNL 309
Query: 171 KSLESIKLNGN-RLSHFPVRSVEPLLKLMMIELHDN 205
L + + N RLS R+ L ++ + L++N
Sbjct: 310 PELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNN 345
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 213 (80.0 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 63/219 (28%), Positives = 98/219 (44%)
Query: 42 IPEAPESELTQV-----LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
I E P +Q+ L + N + LP F A L NL L L + + +G
Sbjct: 229 ISELPPQVFSQLFCLERLWLQRNAITHLPLSIF--ASLGNLTFLSLQWNMLRVLPAGLFA 286
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L+ + L+ N L ++ TF + LR L L+ N I+ + G F+ + LVKL +
Sbjct: 287 HTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGS 346
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
+ L + P F LE + L+ N+L+ P + L + LH NPW CDC++ +
Sbjct: 347 NNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYL 406
Query: 217 KMWLADKKN--VPVQPACTGPERLSGKVFSDLHADDFAC 253
WL + + +Q C GP L G+V L+ C
Sbjct: 407 FNWLQQYTDRLLNIQTYCAGPAYLKGQVVPALNEKQLVC 445
Score = 169 (64.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/166 (31%), Positives = 82/166 (49%)
Query: 39 LITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L +PE LT Q L +S N L LP+ F + G +LQ+LFL +I ++
Sbjct: 181 LAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLG--SLQELFLDSNNISELPPQVFS 238
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L L + L N +T +P F S+ L L+L N + + G F P LV L ++
Sbjct: 239 QLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 298
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPV---RSVEPLLKLMM 199
++LE ++ F +L S+ L+ N ++H P R +E L+KL +
Sbjct: 299 NQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYL 344
Score = 149 (57.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 48 SELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEID 105
S LT + L ++ N L+ LP+ F+ L L+ L L + + LT+L ++
Sbjct: 118 SNLTSLGKLTLNFNMLEALPEGLFQH--LAALESLHLQGNQLQALPRRLFQPLTHLKTLN 175
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPE 165
L+ NLL +P F + L+ L L+ N +S + +G F + L +L + + + + P+
Sbjct: 176 LAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQ 235
Query: 166 AFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
F+ LE + L N ++H P+ L L + L N
Sbjct: 236 VFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWN 275
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
LT+V+ ++ Q P +AF GL L+ L + + + LT+L ++ L+ N
Sbjct: 75 LTKVVFLNTQLCQFRP-DAF--GGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFN 131
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
+L ++P FQ + L L+L N + + + FQ + L L+++++ L + E F
Sbjct: 132 MLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHP 191
Query: 170 AKSLESIKLNGNRLSHFP 187
SL+++KL+ N LS P
Sbjct: 192 LTSLQTLKLSNNALSGLP 209
Score = 133 (51.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L +PE L + L + GN LQ LP+ F+ L +L+ L LA+ + Q+
Sbjct: 133 LEALPEGLFQHLAALESLHLQGNQLQALPRRLFQP--LTHLKTLNLAQNLLAQLPEELFH 190
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
LT+L + LS+N L+ +P F + L++L L N IS++ F + L +L +
Sbjct: 191 PLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQR 250
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
+ + H+ F +L + L N L P
Sbjct: 251 NAITHLPLSIFASLGNLTFLSLQWNMLRVLP 281
Score = 130 (50.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 45/190 (23%), Positives = 81/190 (42%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C Q + C D+ L T+P + P T+ + + L AF
Sbjct: 22 CPMGCDCF----VQEVFCSDEELATVPLDIPP--YTKNIIFVETSFTTLETRAF--GSNP 73
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL K+ + Q A GL L +++++ + ++ + F ++ L L L N +
Sbjct: 74 NLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNML 133
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ +G FQ + L L + ++L+ + F L+++ L N L+ P PL
Sbjct: 134 EALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLT 193
Query: 196 KLMMIELHDN 205
L ++L +N
Sbjct: 194 SLQTLKLSNN 203
>MGI|MGI:2653612 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=ISO] [GO:0007156 "homophilic
cell adhesion" evidence=ISO;ISS] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=ISO;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007413 "axonal fasciculation" evidence=ISO;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042552 "myelination" evidence=ISS] [GO:0050772 "positive
regulation of axonogenesis" evidence=ISO;ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2653612 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0042552 GO:GO:0050772 GO:GO:0007157
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57463 eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237008
EMBL:AB167509 EMBL:AK035960 EMBL:AK173118 EMBL:AL671854
EMBL:BC010598 EMBL:BC022907 IPI:IPI00122248 IPI:IPI00608009
RefSeq:NP_001004293.1 RefSeq:NP_666249.2 UniGene:Mm.275752 PDB:2XOT
PDBsum:2XOT ProteinModelPortal:Q80ZD8 SMR:Q80ZD8 STRING:Q80ZD8
PhosphoSite:Q80ZD8 PRIDE:Q80ZD8 Ensembl:ENSMUST00000050909
Ensembl:ENSMUST00000106656 Ensembl:ENSMUST00000106659 GeneID:229715
KEGG:mmu:229715 GeneTree:ENSGT00530000063545 InParanoid:Q80ZD8
NextBio:379639 Bgee:Q80ZD8 CleanEx:MM_AMIGO1 Genevestigator:Q80ZD8
GermOnline:ENSMUSG00000050947 Uniprot:Q80ZD8
Length = 492
Score = 212 (79.7 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 74/270 (27%), Positives = 123/270 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C+C + C + L +P++ S T +LD+S NNL L E + L N
Sbjct: 34 CPANCLC----ASNILSCSKQQLPNVPQSLPS-YTALLDLSHNNLSRLRAE-WTPTRLTN 87
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+ H+ I S A + NL +DLS N L ++ F ++ L L L N I
Sbjct: 88 LHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIV 147
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKL---NGNRLSHFPVRSVEP 193
+++ AF+ + L KL +S++++ E L + L + N+L P+ ++
Sbjct: 148 VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQK 207
Query: 194 LLKLMM--IELHDNPWVCDCNMRSI-KMW----LADKKNVPVQPACTGPERLSGKVFSDL 246
L + + LH+NP CDC + + W L+ + C ++L +FS
Sbjct: 208 LPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCMHSKKLHN-IFS-- 264
Query: 247 HADDFACKPEIRMDSRYVEAVSSENATVVC 276
D F C E + +S + EA + T+ C
Sbjct: 265 -LDFFNCS-EYK-ESAW-EAHLGDTLTIRC 290
>UNIPROTKB|Q9NZU0 [details] [associations]
symbol:FLRT3 "Leucine-rich repeat transmembrane protein
FLRT3" species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0030674 "protein binding, bridging" evidence=NAS]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005057 "receptor
signaling protein activity" evidence=NAS] InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0005887 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0030674 EMBL:CH471133 GO:GO:0005057 InterPro:IPR000372
SMART:SM00013 HOVERGEN:HBG051629 KO:K16362 EMBL:AF169677
EMBL:AB040902 EMBL:AK027297 EMBL:AK027670 EMBL:AK027694
EMBL:AY358319 EMBL:AK074909 EMBL:AL132826 EMBL:BC020870
IPI:IPI00002320 RefSeq:NP_037413.1 RefSeq:NP_938205.1
UniGene:Hs.41296 ProteinModelPortal:Q9NZU0 SMR:Q9NZU0 STRING:Q9NZU0
PhosphoSite:Q9NZU0 DMDM:20138400 PaxDb:Q9NZU0 PeptideAtlas:Q9NZU0
PRIDE:Q9NZU0 DNASU:23767 Ensembl:ENST00000341420
Ensembl:ENST00000378053 GeneID:23767 KEGG:hsa:23767 UCSC:uc002wov.2
CTD:23767 GeneCards:GC20M014251 HGNC:HGNC:3762 HPA:CAB026166
MIM:604808 neXtProt:NX_Q9NZU0 PharmGKB:PA28179 InParanoid:Q9NZU0
OMA:SPYRVCM OrthoDB:EOG4NCMCB GenomeRNAi:23767 NextBio:46731
ArrayExpress:Q9NZU0 Bgee:Q9NZU0 CleanEx:HS_FLRT3
Genevestigator:Q9NZU0 GermOnline:ENSG00000125848 Uniprot:Q9NZU0
Length = 649
Score = 214 (80.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 62/214 (28%), Positives = 106/214 (49%)
Query: 47 ESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDL 106
+S ++L +S N+L +P R +++L L I I S +L GLT+L + L
Sbjct: 152 DSNYLRLLFLSRNHLSTIPWGLPR-----TIEELRLDDNRISTISSPSLQGLTSLKRLVL 206
Query: 107 SDNLLTS--IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG--LVKLDMSESRLEHI 162
NLL + + F ++ L +L+L RN ++ +PG L KL + ++ + +
Sbjct: 207 DGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVN----LPGTNLRKLYLQDNHINRV 262
Query: 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLAD 222
P AF+ + L + ++ N LS+ P + L + + L +NPW C C M+ ++ WL
Sbjct: 263 PPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDLDNITQLILRNNPWYCGCKMKWVRDWLQS 322
Query: 223 KK-NVPVQPA-CTGPERLSGKVFSDLHADDFACK 254
V V+ C PE++ G DL+A+ F CK
Sbjct: 323 LPVKVNVRGLMCQAPEKVRGMAIKDLNAELFDCK 356
Score = 141 (54.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 51/193 (26%), Positives = 93/193 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C G ++ C D+FL +IP PE T L + N +P + LL
Sbjct: 31 CPSVCRCD--AG--FIYCNDRFLTSIPTGIPEDATTLYLQNNQINNAGIPSDL---KNLL 83
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLI-EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+++++L + + + L + E+ L +N + +I + + +L +L+L N
Sbjct: 84 KVERIYLYHNSLDEFPTN----LPKYVKELHLQENNIRTITYDSLSKIPYLEELHLDDNS 139
Query: 135 IS--KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
+S IE+GAF+ L L +S + H+S + +++E ++L+ NR+S S++
Sbjct: 140 VSAVSIEEGAFRDSNYLRLLFLSRN---HLSTIPWGLPRTIEELRLDDNRISTISSPSLQ 196
Query: 193 PLLKLMMIELHDN 205
L L + L N
Sbjct: 197 GLTSLKRLVLDGN 209
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 210 (79.0 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 67/235 (28%), Positives = 98/235 (41%)
Query: 54 LDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N +L+ L + F+ GL LQ L L RC + + GL +L + L +N L
Sbjct: 111 LDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLL 168
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + + F+ + L +L + +RL+ + AF G
Sbjct: 169 HLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLSR 228
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L + L N L+ P ++ L L + L+ NPW CDC R + W + C
Sbjct: 229 LTILYLFNNSLASLPGEALADLPSLEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTC 288
Query: 233 TGPERLSGKVFSDLHADDF-ACKPEI--RMDSRYVEAVSSENATVVCRVDSIPPA 284
P G+ L DF AC P R SR SS N PPA
Sbjct: 289 ATPPERQGRDLRALREADFQACPPAAPTRPGSR-ARGNSSSNHLYGVAEAGAPPA 342
Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 55/191 (28%), Positives = 82/191 (42%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C + C+ ++P P S TQ L + N ++ L F
Sbjct: 31 CPMLCTCY--SSPPTVSCQANNFSSVPLSLPPS--TQRLFLQNNLIRTLRPGTFGS---- 82
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNP 134
NL L+L ++ I G L L E+DL DN L S+ TFQ + L+ L+L R
Sbjct: 83 NLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQ 142
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+S + F+ + L L + E+ L H+ + F +L + L+GNRL L
Sbjct: 143 LSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 195 LKLMMIELHDN 205
L + LH N
Sbjct: 203 GSLDRLLLHGN 213
>UNIPROTKB|E2QXQ1 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AAEX03013291 RefSeq:XP_849372.1
Ensembl:ENSCAFT00000008533 GeneID:485513 KEGG:cfa:485513
NextBio:20859499 Uniprot:E2QXQ1
Length = 958
Score = 226 (84.6 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 72/274 (26%), Positives = 125/274 (45%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + + C+++ + +I E P+ + + ++ N + ++ + F A
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVRRSDFLEAT 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I A LTNL + L+ N + + F ++ L+ L L N
Sbjct: 434 GLDL--LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I +I+ G F VP L L ++ + L+ + F+G L + L N + PV V
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLD 550
Query: 194 LLK-LMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQPA-CTGPERLSGKVFSDLHADD 250
LK L+ I+LHDNPW C C++ +K+W+ K V V C P++ + + ++
Sbjct: 551 QLKSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIKSE- 609
Query: 251 FACKPEIRMDSRYVEAVSSENATVVCRVDSIPPA 284
C P+ V + + V R ++ PA
Sbjct: 610 LLC-PDY--SDVVVSTPTPSSIQVPARTSAVTPA 640
Score = 209 (78.6 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 70/250 (28%), Positives = 115/250 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA--PESELTQVLDMSGNNL-QILPKEAFRRAG 73
C + C C+ K G + C ++ +I++ E P + +L +SGN L ++ P E G
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLL-LSGNLLNRLYPNEFVNYTG 106
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L L I I++GA GL L + L++N L + TF + L L + N
Sbjct: 107 A---SILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYN 163
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVE 192
IS IE AF + L L ++++ L + F L + L GNRL P V ++
Sbjct: 164 YISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQ 222
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLSGKVFSDLHADD 250
+ K++ ++L +NPW C C + S+K WL + C P RL G+ ++ +
Sbjct: 223 HMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQE 282
Query: 251 FACKPEIRMD 260
C ++ D
Sbjct: 283 L-CPRKLISD 291
Score = 38 (18.4 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 411 ANGNAHAVVN-KTPSLTPVIETSSFTERKQFPPPSYH 446
A G+ HA V+ + P+L P ++T + + P P H
Sbjct: 723 AGGHPHAHVHHRGPAL-PKVKTPAGHVYEYIPHPLGH 758
>UNIPROTKB|Q86WK6 [details] [associations]
symbol:AMIGO1 "Amphoterin-induced protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=ISS]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS]
[GO:0007413 "axonal fasciculation" evidence=ISS] [GO:0042552
"myelination" evidence=ISS] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 EMBL:AY237007
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030424 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042552
GO:GO:0050772 GO:GO:0007157 InterPro:IPR000372 SMART:SM00013
EMBL:AK295678 EMBL:AL355145 EMBL:BC040879 EMBL:AB032989
IPI:IPI00410140 RefSeq:NP_065754.2 UniGene:Hs.726479
ProteinModelPortal:Q86WK6 SMR:Q86WK6 STRING:Q86WK6
PhosphoSite:Q86WK6 DMDM:68052342 PaxDb:Q86WK6 PRIDE:Q86WK6
DNASU:57463 Ensembl:ENST00000369862 Ensembl:ENST00000369864
GeneID:57463 KEGG:hsa:57463 UCSC:uc001dxx.4 CTD:57463
GeneCards:GC01M110046 HGNC:HGNC:20824 HPA:HPA046152
neXtProt:NX_Q86WK6 PharmGKB:PA142672625 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 InParanoid:Q86WK6
OMA:SVELKVY OrthoDB:EOG4TB4BP PhylomeDB:Q86WK6 ChiTaRS:AMIGO1
GenomeRNAi:57463 NextBio:63666 Bgee:Q86WK6 CleanEx:HS_AMIGO1
Genevestigator:Q86WK6 GermOnline:ENSG00000181754 GO:GO:0007413
GO:GO:0007156 InterPro:IPR013106 Pfam:PF07686 Uniprot:Q86WK6
Length = 493
Score = 211 (79.3 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C+C + C + L +P + S T +LD+S NNL L E + L
Sbjct: 34 CPAACLC----ASNILSCSKQQLPNVPHSLPS-YTALLDLSHNNLSRLRAE-WTPTRLTQ 87
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+ H+ I S A + NL +DLS N L ++ F ++ L L L N I
Sbjct: 88 LHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHIM 147
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFT-GAK--SLESIKLNGNRLSHFPVRSVEP 193
+++ AF + L KL +S++++ E GAK L + L+ N+L + P+ ++
Sbjct: 148 AVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQK 207
Query: 194 LLKLMM--IELHDNPWVCDCNM 213
L + + LH+NP CDC +
Sbjct: 208 LPAWIKNGLYLHNNPLNCDCEL 229
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 215 (80.7 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 94/340 (27%), Positives = 149/340 (43%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + N +Q LP +FR L L++L L+ I + AL G+++L ++DLS N L
Sbjct: 320 LSLHSNRIQSLPSGSFRV--LRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAV 377
Query: 114 IPS----LTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
L S+ FLR L N + I K AF+ P L +LD++++ + I PEAF
Sbjct: 378 CVEDGAVLYNTSMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAF-- 435
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWL----ADKKN 225
EPL +L + ++ + +CDC + + W+ DK +
Sbjct: 436 ----------------------EPL-ELKRLVMNSSSILCDCQISWLASWIYRLKLDKSS 472
Query: 226 VPVQPACTGPERLSGKVFSDLHADDFAC---KPEIRMDSRYVEAVS--SENATVVCRVDS 280
+ + C+ P L+ + + C P ++ + VE + E A C V
Sbjct: 473 IIAK--CSYPPPLADLYVVAIDTANLTCHNDSPRAKIVRQPVEVSTLIGEKARFTCNVYG 530
Query: 281 IPPAAISW--YWNG--RLLLNNTA-FSSYQRIFVIEQGEYERK---SSLVLTNAQESDSG 332
P +I W NG R+L+ ++A F S R V+ ER+ + L+L N +D+
Sbjct: 531 ASPLSIEWRVMENGQPRVLVQDSATFLSINRTAVVNGTFDERELAAAELLLDNVAMTDNS 590
Query: 333 RFYCVAENRAGIA-DANFTLQV------TYRGVGLPFLGG 365
+ CVA NR G + LQV TY +P L G
Sbjct: 591 EYQCVARNRFGSDFSTHVKLQVYQAPKFTYTPEDMPLLVG 630
Score = 172 (65.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 43/152 (28%), Positives = 80/152 (52%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD++ N++ + + F + L L LAR HI ++ + L L +DL+ N++
Sbjct: 176 LDLASNSITDIGTDHF--SSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIRE 233
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ L F + L++++LARN + +++ G F GL L++S +R++ ++ G SL
Sbjct: 234 VRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSL 293
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
E + L+ N++ F + S KL + LH N
Sbjct: 294 EVLDLSYNQIQSFHISSWSHTPKLKWLSLHSN 325
Score = 125 (49.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/130 (24%), Positives = 68/130 (52%)
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
N + L L+ I ID L G L +D+S+N++ I F ++ L+ LN+ +N +
Sbjct: 53 NTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRL 112
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
++I +G+ + + L KLD+ + + ++ E + ++ S+ L+ N +S+ P + +
Sbjct: 113 ARIPRGSHE-LGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKV 171
Query: 196 KLMMIELHDN 205
+ ++L N
Sbjct: 172 NIEKLDLASN 181
Score = 124 (48.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L++S N +Q + E + GL +L+ L L+ I + L + L N + S
Sbjct: 272 LNLSTNRVQAVT-EGWM-FGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQS 329
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF----TG 169
+PS +F+ +R L +L L+ N I + K A + L KLD+S + L + T
Sbjct: 330 LPSGSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTS 389
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L S++ N+L P R+ E L ++L DNP
Sbjct: 390 MPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNP 426
Score = 49 (22.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 19/84 (22%), Positives = 34/84 (40%)
Query: 270 ENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQES 329
+ A +C P I W + + A + +R++V ++ + + N +
Sbjct: 631 QTAKFLCAATGTPRPEIKWAFEQ---IPFPAAEA-RRLYVTPNDDH-----IYIMNVTKE 681
Query: 330 DSGRFYCVAENRAGIADANFTLQV 353
D G + C A N AG A+ L V
Sbjct: 682 DQGAYTCHATNVAGQTQASANLIV 705
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 305 QRIFVIEQGEY-ERKSSLVLTNAQESDSGRFYC 336
Q I +++ ++ + L LT SDSG + C
Sbjct: 751 QVILFLKKAKFSDNDQILTLTQTTFSDSGEYSC 783
>MGI|MGI:1921761 [details] [associations]
symbol:Lrrc17 "leucine rich repeat containing 17"
species:10090 "Mus musculus" [GO:0001503 "ossification"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005615
"extracellular space" evidence=IDA] [GO:0033687 "osteoblast
proliferation" evidence=IDA] [GO:0045671 "negative regulation of
osteoclast differentiation" evidence=IDA] [GO:0048539 "bone marrow
development" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:1921761 GO:GO:0005615 InterPro:IPR000483 SMART:SM00082
GO:GO:0001503 GO:GO:0045671 GO:GO:0048539
GeneTree:ENSGT00700000104028 CTD:10234 eggNOG:NOG263968
HOGENOM:HOG000113365 HOVERGEN:HBG052344 OMA:PIQTLDC
OrthoDB:EOG4MCX08 EMBL:AK018071 EMBL:BC030317 IPI:IPI00110185
RefSeq:NP_083253.1 UniGene:Mm.439963 ProteinModelPortal:Q9CXD9
SMR:Q9CXD9 STRING:Q9CXD9 PRIDE:Q9CXD9 Ensembl:ENSMUST00000035651
GeneID:74511 KEGG:mmu:74511 UCSC:uc008wor.2 InParanoid:Q9CXD9
NextBio:340982 Bgee:Q9CXD9 CleanEx:MM_LRRC17 Genevestigator:Q9CXD9
GermOnline:ENSMUSG00000039883 Uniprot:Q9CXD9
Length = 443
Score = 169 (64.5 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 40/114 (35%), Positives = 58/114 (50%)
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L+L+ N I ++ F+ V L KL++S + +E I P AF G LE + L+ N L +F
Sbjct: 275 LDLSSNKIRQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLIHLEELDLSNNSLQNFD 334
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-CTGPERLSG 240
+E L L ++ L DNPW CD ++ + WL NV C PE G
Sbjct: 335 YGVLEDLYFLKLLWLRDNPWRCDYSIHYLYYWLKHHYNVHYNGLECKTPEEYKG 388
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 35/131 (26%), Positives = 56/131 (42%)
Query: 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVR 189
LARN I ++ F L LD+ ++ + I EAF G L ++ L N++
Sbjct: 90 LARNKIRVLKNNMFAKFKRLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEE 149
Query: 190 SV--EPLLKLMMIELHDNPWVCDCNMRSI--KMWLADKKNVPVQPACTGPERLSGKVFSD 245
+ PLL + L+DNPW C C + ++ + + +N+ C P L K
Sbjct: 150 AFIYTPLLSYL--RLYDNPWHCTCELETLISMLQIPRNRNLGNYAKCGSPPALRNKKLLQ 207
Query: 246 LHADDFACKPE 256
L + C E
Sbjct: 208 LKPQEL-CDEE 217
Score = 87 (35.7 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 29 KQWMECRDKFLI-TIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHI 87
+++++C+++ L+ +P+ P+ +L +L ++ N +++L F A L+ L L + I
Sbjct: 64 EKYLDCQERKLVYVLPDWPQ-DLLHML-LARNKIRVLKNNMF--AKFKRLKSLDLQQNEI 119
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+I+S A GL L + L N + + F L L L NP
Sbjct: 120 SKIESEAFFGLNKLTTLLLQHNQIKVLTEEAFIYTPLLSYLRLYDNP 166
Score = 79 (32.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 125 LRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLS 184
++ L+ R + K+ P +VKLD+S +++ + P+ F L+ + L+ N +
Sbjct: 251 IQTLDCKRKELKKVPSN---IPPDIVKLDLSSNKIRQLRPKEFEDVHELKKLNLSSNGIE 307
Query: 185 HFPVRSVEPLLKLMMIELHDN 205
+ L+ L ++L +N
Sbjct: 308 FIDPAAFLGLIHLEELDLSNN 328
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 209 (78.6 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 67/235 (28%), Positives = 98/235 (41%)
Query: 54 LDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N +L+ L + F+ GL LQ L L RC + + GL +L + L +N L
Sbjct: 111 LDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLL 168
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + + F+ + L +L + +RL+ + AF G
Sbjct: 169 HLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSR 228
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L + L N L+ P ++ L L + L+ NPW CDC R + W + C
Sbjct: 229 LTILYLFNNSLASLPGEALADLPALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTC 288
Query: 233 TGPERLSGKVFSDLHADDF-ACKPEI--RMDSRYVEAVSSENATVVCRVDSIPPA 284
P G+ L DF AC P R SR SS N PPA
Sbjct: 289 ATPPERQGRDLRALRDSDFQACPPPTPTRPGSR-ARGNSSSNHLYGVAEAGAPPA 342
Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 55/191 (28%), Positives = 82/191 (42%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C + C+ ++P P S TQ L + N ++ L F
Sbjct: 31 CPMLCTCY--SSPPTVSCQANNFSSVPLSLPPS--TQRLFLQNNLIRSLRPGTFGP---- 82
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNP 134
NL L+L ++ I G L L E+DL DN L S+ TFQ + L+ L+L R
Sbjct: 83 NLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQ 142
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+S + F+ + L L + E+ L H+ + F +L + L+GNRL L
Sbjct: 143 LSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 195 LKLMMIELHDN 205
L + LH N
Sbjct: 203 GSLDRLLLHGN 213
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 209 (78.6 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 67/235 (28%), Positives = 98/235 (41%)
Query: 54 LDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N +L+ L + F+ GL LQ L L RC + + GL +L + L +N L
Sbjct: 111 LDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLL 168
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + + F+ + L +L + +RL+ + AF G
Sbjct: 169 HLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSR 228
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L + L N L+ P ++ L L + L+ NPW CDC R + W + C
Sbjct: 229 LTILYLFNNSLASLPGEALADLPALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTC 288
Query: 233 TGPERLSGKVFSDLHADDF-ACKPEI--RMDSRYVEAVSSENATVVCRVDSIPPA 284
P G+ L DF AC P R SR SS N PPA
Sbjct: 289 ATPPERQGRDLRTLRDTDFQACPPPTPTRPGSR-ARGNSSSNHLYGVAEAGAPPA 342
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/191 (28%), Positives = 82/191 (42%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C + C+ ++P P S TQ L + N ++ L F
Sbjct: 31 CPMLCTCY--SSPPTVSCQANNFSSVPLSLPPS--TQRLFLQNNLIRSLRPGTFGP---- 82
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNP 134
NL L+L ++ I G L L E+DL DN L S+ TFQ + L+ L+L R
Sbjct: 83 NLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQ 142
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+S + F+ + L L + E+ L H+ + F +L + L+GNRL L
Sbjct: 143 LSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 195 LKLMMIELHDN 205
L + LH N
Sbjct: 203 GSLDRLLLHGN 213
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 189 (71.6 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 55/184 (29%), Positives = 94/184 (51%)
Query: 39 LITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L+++ A +L Q LD+S N LQ + EA L +L++L L+ + + AL
Sbjct: 41 LLSVSTAAFQKLAALQDLDLSDNGLQAVLTEA----ALPSLKELLLSHNALEALP--ALQ 94
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
GL L + L+ N L ++ F++V L+DL+L N + + + AF + L LD+S+
Sbjct: 95 GLPALTRLALAHNKLQALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSD 154
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
+ LE + +LE++ L+GNRL P + L +NPW CDC++ +
Sbjct: 155 NALEELPRGLLQDLVTLETLWLSGNRLRALPSGFFPEGHLFAYVFLTENPWHCDCDLVYL 214
Query: 217 KMWL 220
+ W+
Sbjct: 215 RSWI 218
>UNIPROTKB|Q8N6Y2 [details] [associations]
symbol:LRRC17 "Leucine-rich repeat-containing protein 17"
species:9606 "Homo sapiens" [GO:0001649 "osteoblast
differentiation" evidence=ISS] [GO:0033687 "osteoblast
proliferation" evidence=ISS] [GO:0045671 "negative regulation of
osteoclast differentiation" evidence=ISS] [GO:0048539 "bone marrow
development" evidence=ISS] [GO:0005615 "extracellular space"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0001503 EMBL:AC073127
GO:GO:0045671 GO:GO:0048539 EMBL:U32907 EMBL:AY358889 EMBL:BC027903
IPI:IPI00171160 IPI:IPI00418181 PIR:G02020 RefSeq:NP_001026862.1
RefSeq:NP_005815.2 UniGene:Hs.567412 ProteinModelPortal:Q8N6Y2
SMR:Q8N6Y2 STRING:Q8N6Y2 PhosphoSite:Q8N6Y2 DMDM:51701682
PRIDE:Q8N6Y2 DNASU:10234 Ensembl:ENST00000249377
Ensembl:ENST00000339431 GeneID:10234 KEGG:hsa:10234 UCSC:uc003vat.3
UCSC:uc003vau.3 CTD:10234 GeneCards:GC07P102553 HGNC:HGNC:16895
HPA:HPA030139 neXtProt:NX_Q8N6Y2 PharmGKB:PA134866295
eggNOG:NOG263968 HOGENOM:HOG000113365 HOVERGEN:HBG052344
InParanoid:Q8N6Y2 OMA:PIQTLDC OrthoDB:EOG4MCX08 PhylomeDB:Q8N6Y2
GenomeRNAi:10234 NextBio:38756 ArrayExpress:Q8N6Y2 Bgee:Q8N6Y2
CleanEx:HS_LRRC17 Genevestigator:Q8N6Y2 GermOnline:ENSG00000128606
Uniprot:Q8N6Y2
Length = 441
Score = 177 (67.4 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 41/114 (35%), Positives = 59/114 (51%)
Query: 128 LNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP 187
L+L+ N I+++ F+ V L KL++S + +E I P AF G LE + L+ N L +F
Sbjct: 273 LDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEELDLSNNSLQNFD 332
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA-CTGPERLSG 240
+E L L ++ L DNPW CD N+ + WL NV C PE G
Sbjct: 333 YGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNGLECKTPEEYKG 386
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/155 (25%), Positives = 64/155 (41%)
Query: 130 LARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-- 187
LARN I ++ F L LD+ ++ + I EAF G L ++ L N++
Sbjct: 88 LARNKIRTLKNNMFSKFKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEE 147
Query: 188 VRSVEPLLKLMMIELHDNPWVCDCNMRSI--KMWLADKKNVPVQPACTGPERLSGKVFSD 245
V PLL + L+DNPW C C + ++ + + +N+ C P+ K
Sbjct: 148 VFIYTPLLSYL--RLYDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESPQEQKNKKLRQ 205
Query: 246 LHADDFACKPEIRMDSRYVEAVSSENATVVCRVDS 280
+ ++ C E + VS + VDS
Sbjct: 206 IKSEQL-CNEEEKEQLDPKPQVSGRPPVIKPEVDS 239
Score = 78 (32.5 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 29 KQWMECRDKFLI-TIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHI 87
+++++C+++ L+ +P P+ +L +L ++ N ++ L F + L+ L L + I
Sbjct: 62 EKYLDCQERKLVYVLPGWPQ-DLLHML-LARNKIRTLKNNMFSK--FKKLKSLDLQQNEI 117
Query: 88 GQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+I+S A GL L + L N + + F L L L NP
Sbjct: 118 SKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNP 164
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 215 (80.7 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 58/189 (30%), Positives = 95/189 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C+ G +C ++ L +P LT LD+S NNL L FR L
Sbjct: 34 CPAPCRCQEDGFMLSADCSERGLSAVP-GDLHPLTAYLDLSMNNLTELQPGLFRHLSFL- 91
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
++L L+ H+ I A GL +L + L +N L IP+ + L+ L L N IS
Sbjct: 92 -EELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLIS 150
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ G+F+ +P L L + ++ L + A + +L+++ L NR+SH P + + L
Sbjct: 151 LVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSS 210
Query: 197 LMMIELHDN 205
L+++ LH+N
Sbjct: 211 LVVLHLHNN 219
Score = 203 (76.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 53/154 (34%), Positives = 81/154 (52%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++L + N L +P EA L +LQ L L I + G+ +GL L + L DN L
Sbjct: 116 KILMLQNNQLGGIPAEALWE--LPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNAL 173
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T +P S+ L+ + LA N IS + AFQ + LV L + +R++H+ +F G
Sbjct: 174 TEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLH 233
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
SLE++ LN N L FPV ++ L +L + H+N
Sbjct: 234 SLETLDLNHNELQEFPV-AIRTLGRLQELGFHNN 266
Score = 196 (74.1 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 49/152 (32%), Positives = 83/152 (54%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +SGN+L +P +AF +GL +L+ L L +G I + AL L +L + L NL++
Sbjct: 94 LRLSGNHLSHIPGQAF--SGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISL 151
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P +F+ + LR L L N ++++ GA +P L + ++ +R+ H+ AF SL
Sbjct: 152 VPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSL 211
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L+ NR+ H S E L L ++L+ N
Sbjct: 212 VVLHLHNNRIQHLGAHSFEGLHSLETLDLNHN 243
Score = 133 (51.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L + N + ++P +F GL L+ L+L + ++ GAL L L + L+ N +
Sbjct: 140 QSLRLDANLISLVPDGSFE--GLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRI 197
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
+ +P FQ++ L L+L N I + +F+ + L LD++ + L+ P A
Sbjct: 198 SHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEF-PVAIRTLG 256
Query: 172 SLESIKLNGNRLSHFPVRSV--EPLLKLMMIELHDNP 206
L+ + + N + P ++ PLL+ I +DNP
Sbjct: 257 RLQELGFHNNNIQTIPEKAFLGNPLLQT--IHFYDNP 291
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
G +L+ L L R + ++ G L L ++LS N + +PSL + L + L
Sbjct: 325 GTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQGLPSL--HRCQKLEKIGLQH 382
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N I +I F + L LD+S + + I PEAF ++L + L N+L+ P+ +
Sbjct: 383 NRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVKLDLTHNQLTMLPLAGLG 442
Query: 193 PLLKLMM 199
L+ L +
Sbjct: 443 GLVHLKL 449
>UNIPROTKB|Q86UN2 [details] [associations]
symbol:RTN4RL1 "Reticulon-4 receptor-like 1" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471108 GO:GO:0009986
GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0004872 GO:GO:0045121
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
EMBL:AY250219 EMBL:AF532859 EMBL:BC128608 EMBL:AL834409
EMBL:BK001305 IPI:IPI00328745 RefSeq:NP_848663.1 UniGene:Hs.22917
ProteinModelPortal:Q86UN2 SMR:Q86UN2 STRING:Q86UN2 DMDM:74714017
PRIDE:Q86UN2 Ensembl:ENST00000331238 GeneID:146760 KEGG:hsa:146760
UCSC:uc002ftp.3 CTD:146760 GeneCards:GC17M001786 HGNC:HGNC:21329
HPA:HPA044428 MIM:610461 neXtProt:NX_Q86UN2 PharmGKB:PA134973992
HOGENOM:HOG000116109 HOVERGEN:HBG063707 InParanoid:Q86UN2 KO:K16660
OMA:NCTSHRN OrthoDB:EOG4FXR7G GenomeRNAi:146760 NextBio:85443
Bgee:Q86UN2 CleanEx:HS_RTN4RL1 Genevestigator:Q86UN2
GermOnline:ENSG00000185924 Uniprot:Q86UN2
Length = 441
Score = 209 (78.6 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 58/199 (29%), Positives = 93/199 (46%)
Query: 54 LDMSGNN-LQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N L+ L E F+ GL+ L L+L +C + + +G GL +L + L DN +
Sbjct: 105 LDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGVFGGLHSLQYLYLQDNHIE 162
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + G F+ + L +L + E++L+ + +AF +
Sbjct: 163 YLQDDIFVDLVNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQWVHHKAFHDLRR 222
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L ++ L N LS + PL L + L+ NPW C C RS+ WL + C
Sbjct: 223 LTTLFLFNNSLSELQGECLAPLGALEFLRLNGNPWDCGCRARSLWEWLQRFRGSSSAVPC 282
Query: 233 TGPERLSGKVFSDLHADDF 251
P G+ L A+DF
Sbjct: 283 VSPGLRHGQDLKLLRAEDF 301
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 62/268 (23%), Positives = 111/268 (41%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C + C+ IPE + +V + N + +L F A
Sbjct: 25 CPRDCVCY--PAPMTVSCQAHNFAAIPEGIPVDSERVF-LQNNRIGLLQPGHFSPA---- 77
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN--LLTSIPSLTFQSVRFLRDLNLARNP 134
+ L++ +I I +G +L E+DL DN L T P TFQ + L L L +
Sbjct: 78 MVTLWIYSNNITYIHPSTFEGFVHLEELDLGDNRQLRTLAPE-TFQGLVKLHALYLYKCG 136
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+S + G F + L L + ++ +E++ + F +L + L+GN+L + L
Sbjct: 137 LSALPAGVFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGPGTFRGL 196
Query: 195 LKLMMIELHDNP--WVCDCNMRSIK----MWLADKKNVPVQPACTGPERLSGKVFSDLHA 248
+ L + LH+N WV ++ ++L + +Q C P L F L+
Sbjct: 197 VNLDRLLLHENQLQWVHHKAFHDLRRLTTLFLFNNSLSELQGECLAP--LGALEFLRLNG 254
Query: 249 DDFACKPEIRMDSRYVEAVSSENATVVC 276
+ + C R +++ ++ V C
Sbjct: 255 NPWDCGCRARSLWEWLQRFRGSSSAVPC 282
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 208 (78.3 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 67/235 (28%), Positives = 98/235 (41%)
Query: 54 LDMSGN-NLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N +L+ L + F+ GL LQ L L RC + + GL +L + L +N L
Sbjct: 108 LDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLV 165
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + + F+ + L +L + +RL+ + AF G
Sbjct: 166 HLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGR 225
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L + L N L+ P ++ L L + L+ NPW CDC R + W + C
Sbjct: 226 LTILYLFNNSLASLPGEALADLPSLEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTC 285
Query: 233 TGPERLSGKVFSDLHADDF-ACKPEI--RMDSRYVEAVSSENATVVCRVDSIPPA 284
P G+ L DF AC P R R A SS N PPA
Sbjct: 286 ASPPERRGRDLRALREADFQACPPAAPTRPGGR-ARANSSSNHLYGVAEAGAPPA 339
Score = 135 (52.6 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 54/191 (28%), Positives = 81/191 (42%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C C + C+ +P A P TQ L + N + L +F +
Sbjct: 28 CPMLCTCY--PAPPTVSCQANNFSAVPRALPPG--TQRLFLQNNLIGALRPGSFGPS--- 80
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNP 134
L L+L ++ I G L L E+DL DN L S+ TFQ + L+ L+L R
Sbjct: 81 -LLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQ 139
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+S + F+ + L L + E+ L H+ + F +L + L+GNRL L
Sbjct: 140 LSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 199
Query: 195 LKLMMIELHDN 205
L + LH N
Sbjct: 200 GSLDRLLLHGN 210
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 211 (79.3 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 54/205 (26%), Positives = 96/205 (46%)
Query: 42 IPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+P + +L Q+ L + GN+L+ L F + NL++L+L HI + L
Sbjct: 260 LPPSVFMQLPQLNRLTLFGNSLKELSPGIF--GPMPNLRELWLYDNHISSLPDNVFSNLR 317
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L + LS N ++ I F + LR+L+L N + ++ F+ + L + + +RL
Sbjct: 318 QLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRL 377
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ F L +I+L N+L + P+ + L KL + L+DNPW CD ++ ++ W
Sbjct: 378 RQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLCELRLYDNPWRCDSDILPLRNW 437
Query: 220 LA---DKKNVPVQPACTGPERLSGK 241
L + P C P + G+
Sbjct: 438 LLLNQPRLGTDTVPVCFSPANVRGQ 462
Score = 180 (68.4 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 49/152 (32%), Positives = 75/152 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + N L + AFR G +L+ L LA + + G GL +L + LS N L
Sbjct: 82 LRIEKNELSRITPGAFRNLG--SLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQ 139
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I F L++L L N + I GAF + GL KL++ ++ L HISP F +L
Sbjct: 140 IQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNL 199
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ ++L NRL+ P+ + + L+ L + L N
Sbjct: 200 QVLRLYENRLTDIPMGTFDGLVNLQELALQQN 231
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
QVL + N L +P F GL+NLQ+L L + IG + G NL + LS+N +
Sbjct: 200 QVLRLYENRLTDIPMGTFD--GLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHI 257
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
+ +P F + L L L N + ++ G F +P L +L + ++ + + F+ +
Sbjct: 258 SQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLR 317
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA 231
L+ + L+ N++S + L +L + LH N + D + +M LA+ +N+ +Q
Sbjct: 318 QLQVLILSRNQISFISPGAFNGLTELRELSLHTNA-LQDLDGNVFRM-LANLQNISLQN- 374
Query: 232 CTGPERLSGKVFSDLH 247
+L G +F++++
Sbjct: 375 -NRLRQLPGNIFANVN 389
Score = 160 (61.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 50/169 (29%), Positives = 77/169 (45%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L+ I A S+ + + L + GN+L+ +P AF L+ L KL L + + I
Sbjct: 137 LLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDH--LVGLTKLNLGKNSLTHISPRVFQ 194
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L NL + L +N LT IP TF + L++L L +N I + G F L +L +S
Sbjct: 195 HLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSN 254
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ + + P F L + L GN L P+ L + L+DN
Sbjct: 255 NHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDN 303
Score = 151 (58.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 52/194 (26%), Positives = 85/194 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEA--FRRAGL 74
CPS C C + + +EC ++ +P P L + +LQIL +
Sbjct: 25 CPSECTCS-RASQ--VECTGARIVAVP-TP-------LPWNAMSLQILNTHITELNESPF 73
Query: 75 LNLQKLFLARCH---IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
LN+ L R + +I GA L +L + L++N L +P FQ + L L L+
Sbjct: 74 LNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLS 133
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV 191
N + +I+ F L +L + + LE+I AF L + L N L+H R
Sbjct: 134 SNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVF 193
Query: 192 EPLLKLMMIELHDN 205
+ L L ++ L++N
Sbjct: 194 QHLGNLQVLRLYEN 207
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 47/156 (30%), Positives = 74/156 (47%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
L +L S LQI P F + NL++L L H+ I GA D L L +++L N
Sbjct: 127 LESLLLSSNQLLQIQPAH-FSQCS--NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKN 183
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
LT I FQ + L+ L L N ++ I G F + L +L + ++++ +SP F
Sbjct: 184 SLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHN 243
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+L+ + L+ N +S P L +L + L N
Sbjct: 244 NHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGN 279
Score = 149 (57.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 42/130 (32%), Positives = 64/130 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++ N LQ+LP F+ GL +L+ L L+ + QI +NL E+ L N L
Sbjct: 106 LSLANNKLQVLPIGLFQ--GLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEY 163
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
IP F + L LNL +N ++ I FQ + L L + E+RL I F G +L
Sbjct: 164 IPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNL 223
Query: 174 ESIKLNGNRL 183
+ + L N++
Sbjct: 224 QELALQQNQI 233
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
LT+ L++ N+L + F+ G NLQ L L + I G DGL NL E+ L N
Sbjct: 175 LTK-LNLGKNSLTHISPRVFQHLG--NLQVLRLYENRLTDIPMGTFDGLVNLQELALQQN 231
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
+ + F + L+ L L+ N IS++ F +P L +L + + L+ +SP F
Sbjct: 232 QIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGP 291
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+L + L N +S P L +L ++ L N
Sbjct: 292 MPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRN 327
Score = 40 (19.1 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 21/82 (25%), Positives = 40/82 (48%)
Query: 493 LFQNNYWNQNIRQPTN--SELGFDSNDKTPIIDGVSI-GGELDDNYPPDYG-LPIVGQ-- 546
LF NN+ Q + N S+L + P ++ +++ G L + P +G +P + +
Sbjct: 240 LFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELW 299
Query: 547 -GQNEL--LPNNIHPNAKTLRV 565
N + LP+N+ N + L+V
Sbjct: 300 LYDNHISSLPDNVFSNLRQLQV 321
>MGI|MGI:2448607 [details] [associations]
symbol:Nyx "nyctalopin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0007601 "visual perception"
evidence=IMP] [GO:0050896 "response to stimulus" evidence=IEA]
MGI:MGI:2448607 GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050896
GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477 HOVERGEN:HBG031762
KO:K08129 OrthoDB:EOG43JC4W EMBL:AY114303 EMBL:BC035244
EMBL:BC048381 EMBL:AK038912 IPI:IPI00117261 RefSeq:NP_775591.1
UniGene:Mm.90233 ProteinModelPortal:P83503 SMR:P83503 STRING:P83503
PhosphoSite:P83503 PRIDE:P83503 Ensembl:ENSMUST00000050434
GeneID:236690 KEGG:mmu:236690 GeneTree:ENSGT00690000101803
InParanoid:P83503 NextBio:383039 Bgee:P83503 CleanEx:MM_NYX
Genevestigator:P83503 GermOnline:ENSMUSG00000051228 Uniprot:P83503
Length = 476
Score = 209 (78.6 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 58/214 (27%), Positives = 97/214 (45%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
G+ L+ L L + + +GA L ++ L+DNLL ++P+ F+ +R LR LNL
Sbjct: 199 GMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLNDNLLATLPAAAFRGLRRLRTLNLGG 258
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N + + + F + L L + + + + AF L ++ LNGNRL+ + +
Sbjct: 259 NALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAFQ 318
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDL---HAD 249
P L + L NPW CDC + ++ W+ V AC P ++G+ S + +
Sbjct: 319 PGFFLGRLFLFRNPWRCDCQLEWLRDWMEGSGRV-ADVACASPGSVAGQDLSQVVFERSS 377
Query: 250 DFAC-KP-EIRMDSRYVEAVSSENATVVCRVDSI 281
D C P E+ + AT V R S+
Sbjct: 378 DGLCVDPDELNFTTSSPGPSPEPVATTVSRFSSL 411
Score = 125 (49.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 48/190 (25%), Positives = 82/190 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + C L +P+ E + D+ N L+IL + AF L +
Sbjct: 26 CPAACTCSHVERGCSVRCDRAGLQRVPQEFPCEAASI-DLDRNGLRILGERAF--GTLPS 82
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN-LLTSIPSLTFQSVRFLRDLNLARNPI 135
L++L L ++ I GA GL L E+ L+ N L + TF ++ LR L+LA +
Sbjct: 83 LRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRYLHVRTFAALGRLRRLDLAACRL 142
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + +P L +L ++ + P A G +L +R+ S+ +
Sbjct: 143 FSVPERLLAELPALRELTAFDNLFRRV-PGALRGLANLTHAHFERSRIEAVASGSLLGMR 201
Query: 196 KLMMIELHDN 205
+L + L N
Sbjct: 202 RLRSLSLQAN 211
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 470 NPDLINDTRKPEGLSPEP 487
+PD +N T G SPEP
Sbjct: 383 DPDELNFTTSSPGPSPEP 400
>UNIPROTKB|Q5R7M3 [details] [associations]
symbol:AMIGO2 "Amphoterin-induced protein 2" species:9601
"Pongo abelii" [GO:0007156 "homophilic cell adhesion" evidence=ISS]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS]
[GO:0043069 "negative regulation of programmed cell death"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG080231
GO:GO:0007156 EMBL:CR860091 UniGene:Pab.11604
ProteinModelPortal:Q5R7M3 PRIDE:Q5R7M3 InParanoid:Q5R7M3
Uniprot:Q5R7M3
Length = 522
Score = 216 (81.1 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 98/359 (27%), Positives = 153/359 (42%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ CIC + C +K L +P L + LD+S N + +L E +
Sbjct: 41 CPTACIC----ATDIVSCTNKHLSKVP-GNLFRLMKRLDLSYNRIGLLDSE-WIPVSFAK 94
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L +I I +G+ NL +DLS N L ++ + FQ ++ L L L N IS
Sbjct: 95 LNTLILRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHIS 154
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIK---LNGNRLSHFPVRSVE- 192
++ AF + L KL +S + L + + G L + ++ NR+ P+ +
Sbjct: 155 YLDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRFKLAELMFLDVSYNRIPSMPMHHINL 214
Query: 193 -PLLKLMMIELHDNPWVCDCNMRSIKM-W-------LADKKNVPVQPACTGPERLSGKVF 243
P +L I LH NP+VCDC++ S+ + W + D KN R S +V
Sbjct: 215 VPGKQLRGIYLHGNPFVCDCSLYSLLVFWYRRHFSSVMDFKN-DYTCRLWSDSRHSRQVL 273
Query: 244 ----SDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDS-IPPAAISWYWNG---RLL 295
S ++ D R EA E V C DS A + W G RLL
Sbjct: 274 LLQDSFMNCSDSIINGSFRALGFIHEAQVGERLMVHC--DSKTGNANTDFIWVGPDNRLL 331
Query: 296 LNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+ ++ +V G SLV+ + + D+G + C+A N+ + N T+ VT
Sbjct: 332 EPDKEMENF---YVFHNG------SLVIESPRFEDAGVYSCIAMNKQRLL--NETVDVT 379
Score = 37 (18.1 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 451 ISPNGQ-LPNKTLHSVINISN 470
I+ N Q L N+T+ IN+SN
Sbjct: 364 IAMNKQRLLNETVDVTINVSN 384
>UNIPROTKB|F1RP61 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AEMK01182519 EMBL:CT963117 EMBL:CU041325
RefSeq:XP_003357919.1 Ensembl:ENSSSCT00000010403 GeneID:100155909
KEGG:ssc:100155909 Uniprot:F1RP61
Length = 964
Score = 223 (83.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 72/274 (26%), Positives = 125/274 (45%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + + C+++ + +I E P+ + + ++ N + ++ + F A
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIALVRRSDFLEAT 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I A LTNL + L+ N + + F ++ L+ L L N
Sbjct: 434 GLDL--LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
I +I+ G F VP L L ++ + L+ + F+G L + L N + PV V
Sbjct: 492 LIREIQPGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLD 550
Query: 194 LLK-LMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQPA-CTGPERLSGKVFSDLHADD 250
LK L+ I+LHDNPW C C++ +K+W+ K V V C P++ + + ++
Sbjct: 551 QLKSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIKSE- 609
Query: 251 FACKPEIRMDSRYVEAVSSENATVVCRVDSIPPA 284
C P+ V + + V R ++ PA
Sbjct: 610 LLC-PDY--SDVVVSTPTPSSIQVPVRTSAVTPA 640
Score = 207 (77.9 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 69/250 (27%), Positives = 114/250 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA--PESELTQVLDMSGNNL-QILPKEAFRRAG 73
C + C C+ K G + C ++ +I++ E P + +L +SGN L ++ P E G
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLL-LSGNLLNRLYPNEFVNYTG 106
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L L I I++GA GL L + L++N L + TF + L L + N
Sbjct: 107 A---SILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYN 163
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
IS IE AF + L L ++++ L + F L + L GNRL P + +
Sbjct: 164 YISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LTHLDLRGNRLKLLPYMGLLQ 222
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLSGKVFSDLHADD 250
+ K++ ++L +NPW C C + S+K WL + C P RL G+ ++ +
Sbjct: 223 HMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQE 282
Query: 251 FACKPEIRMD 260
C ++ D
Sbjct: 283 L-CPRKLISD 291
Score = 38 (18.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 411 ANGNAHAVVN-KTPSLTPVIETSSFTERKQFPPPSYH 446
A G+ HA V+ + P+L P ++T + + P P H
Sbjct: 725 AGGHPHAHVHHRGPAL-PKVKTPAGHVYEYIPHPLGH 760
>ZFIN|ZDB-GENE-090312-22 [details] [associations]
symbol:mxra5 "matrix-remodelling associated 5"
species:7955 "Danio rerio" [GO:0048010 "vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005021 "vascular
endothelial growth factor-activated receptor activity"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 ZFIN:ZDB-GENE-090312-22 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104014 EMBL:BX322647 IPI:IPI00898560
Ensembl:ENSDART00000113486 Uniprot:F1QPU8
Length = 2480
Score = 191 (72.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 72/276 (26%), Positives = 121/276 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C + L+T+P ++ + +++ N + + +F AGL
Sbjct: 27 CPRPCACHQPVE---VHCTFRSLLTVPAGVPKQVER-MNLGFNTIHKITYSSF--AGLRK 80
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
++ L + ++ QI G L +L + LS N L + T + L L+L N +
Sbjct: 81 MELLLMHGNNVHQIPDGTFRDLISLQMLKLSYNKLKLLSRQTLMGLWSLTRLHLDHNRLE 140
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFT-----G---AKSLESIKLNGNRLSHFPV 188
I AFQ + L L + ++L+ + P F+ G +L+ + L+ N L+
Sbjct: 141 FIHPDAFQGLTNLRLLHLEGNQLQQLHPATFSTFSVLGHFPVSTLKHLYLSDNILTTLSQ 200
Query: 189 RSVEPLLKLMMIELHDNPWVCDCNMRSIKMW-------LADKKN--VP---VQPACTGPE 236
+ + + L + LH NPW CDC MR W L KK+ P + P C P+
Sbjct: 201 KMLASMPYLESLSLHGNPWTCDCRMRWFNEWNKNSQGVLKCKKDKAYPSGQLCPLCFSPK 260
Query: 237 RLSGKVFSDLHADDFACK-PEIRMDSRYVEAVSSEN 271
+L K +L C P I + +R A+SSE+
Sbjct: 261 QLKKKQLQELEKP--TCNSPIISISNR---AISSED 291
Score = 83 (34.3 bits), Expect = 5.6e-13, Sum P(4) = 5.6e-13
Identities = 30/100 (30%), Positives = 45/100 (45%)
Query: 261 SRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSS 320
S V + E ++ C P A I W ++N + + RI V G S
Sbjct: 576 SEPVTRFAGEPFSLPCAATGSPDADIHWILPNGSIVNK--WLNISRISVASNG------S 627
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGL 360
LV+ N+Q SD+G + CVA N+ G+ D T + R G+
Sbjct: 628 LVIQNSQLSDNGYYKCVAGNQHGM-DTLATKLIISRPPGI 666
Score = 81 (33.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 25/113 (22%), Positives = 46/113 (40%)
Query: 241 KVFSDLHADDFACKPEIRMDSRYVEAVS-SENATVVCRVDSIPPAAISWYW-NGRLLLNN 298
K LH D KP+++ ++ + C + P ++W NG L +
Sbjct: 2181 KFIVQLHVTDILDKPKLKSPKMETFLLTVGRTINLNCSFEISPTLQLTWILQNGSPLQSG 2240
Query: 299 TAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTL 351
F+ + + +LV++N S+SG + C+ N AG+ + TL
Sbjct: 2241 AQFNKFL---------HRADGTLVISNPALSESGTYRCLGRNAAGMVERTVTL 2284
Score = 72 (30.4 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 26/86 (30%), Positives = 37/86 (43%)
Query: 270 ENATVV--CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQ 327
E +TV C PP +I+W + L+ + F + + +FV G S L LT
Sbjct: 1710 EGSTVYFNCSARGAPPPSINWITPDGMQLHPSQFINGRNLFVFPNGTLHLHS-LSLT--- 1765
Query: 328 ESDSGRFYCVAENRAGIADANFTLQV 353
D+GR+ C N G A L V
Sbjct: 1766 --DAGRYECSVTNVIGNARRAIILTV 1789
Score = 65 (27.9 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 19/94 (20%), Positives = 39/94 (41%)
Query: 260 DSRYVEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKS 319
+S V +V + + C P + W ++L + S ++ R
Sbjct: 2103 NSLRVSSVRDQRKLIDCDATGTPAPRVMWVLPENVVLPAPYYGSRMTVY--------RNG 2154
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
+L + + + +DSG+ C+A N G + F +Q+
Sbjct: 2155 TLDIRSVRMTDSGQLACIARNEGG--ETKFIVQL 2186
Score = 63 (27.2 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 22/80 (27%), Positives = 31/80 (38%)
Query: 276 CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFY 335
C IP A ++W R L S R+ I + SL++ N D+G +
Sbjct: 2407 CLAIGIPKAEVAWETPDRTRL---IVSPQPRL--IGNKYLHPQGSLIIQNPTTKDAGLYR 2461
Query: 336 CVAENRAGIADANFTLQVTY 355
C A N G+ D T Y
Sbjct: 2462 CTARNVVGV-DTKGTYLYVY 2480
Score = 63 (27.2 bits), Expect = 5.5e-11, Sum P(4) = 5.5e-11
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 256 EIRMDSRYVEAVSSENATVV-CRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGE 314
E + D+R ++A + T + C V S ++ W + +S R+ G
Sbjct: 470 ESKNDTRTMQAAVVGSPTKINCTVHSSGNESVKWMLPDGSTIETPYRNSENRLSASSSGL 529
Query: 315 YERKSSLVLTNAQESDSGRFYCVAE 339
E KS SDSG +YC+A+
Sbjct: 530 LEIKS------LDHSDSGVYYCIAQ 548
Score = 61 (26.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 26/98 (26%), Positives = 42/98 (42%)
Query: 255 PEIRMDSRYVEAVSSENATVV--CRVDSIPPAAISWYWNGRLLLNN---TAFSSYQRIFV 309
P + + RY EA + T+ C+ P I+W + ++++ T + I V
Sbjct: 1595 PRV-LQPRYREATAYLGQTIEFECQSKGHPQPRITWVLPNKEVVHSSVPTHGTPEHMISV 1653
Query: 310 IEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADA 347
+ G KS + D G + C+A N AG ADA
Sbjct: 1654 LPNGTLHMKS------INQMDRGIYKCIASNAAG-ADA 1684
Score = 60 (26.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 270 ENATVVCRVDSIPPAAISWYWNGRLLLNNTAFS-----SYQRIFVIEQGEYERKSSLVLT 324
+N V C +P I W ++N+ S S R +V+ ++ +L+L
Sbjct: 1911 DNLKVDCVASGLPNPKIQWALPDGTMINSVIKSERNVGSRTRRYVV----FDN-GTLLLN 1965
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQV 353
+ G + C AEN+ G + N ++V
Sbjct: 1966 EVGMHEEGNYTCYAENQVGKDEMNVHVKV 1994
Score = 55 (24.4 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 276 CRVDSIPPAAISWYWNGRLLLNNTAFSSYQ-RIFVIEQGEYERKSSLVLTNAQESDSGRF 334
C P I W + L++ A SY RI V G +L + + E + G +
Sbjct: 1820 CITSGNPEPRIIWRTPSKKLVD--AHYSYDSRIKVSANG------TLSIISVTEKEDGEY 1871
Query: 335 YCVAENRAG 343
CVA N+ G
Sbjct: 1872 LCVARNKIG 1880
Score = 49 (22.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 254 KPEIRMDSRY---VEAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVI 310
KPEI +RY V ++ ++ + C + + ++W ++LN + R V+
Sbjct: 2289 KPEI--SNRYNSPVSIINGQSLNLHC-MSNTDSVHLTWTLPSGMILNRPQRAG--RYAVL 2343
Query: 311 EQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343
G +L + A D G + C A N G
Sbjct: 2344 PNG------TLSIQQASVHDRGSYTCRASNEYG 2370
Score = 46 (21.3 bits), Expect = 5.6e-13, Sum P(4) = 5.6e-13
Identities = 14/53 (26%), Positives = 20/53 (37%)
Query: 397 TYPNSKNPAQIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHSTE 449
T+ N K + + + NG V + P L I FT P + TE
Sbjct: 1159 TFSNFKKEQEKQTILNGEKSGVSHHIPPLKATIH-EEFTTIHAPAPKIFEETE 1210
Score = 45 (20.9 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 254 KPEIRMDS-RYVEAVSSENATVVCRVDSIPPAAISW--YWNGRLLLNNTAFSSYQRIFVI 310
+P+I + R V A + NA + C I++ G + NT F QR V
Sbjct: 1497 RPQITSTNIRSVTAHAETNAYLPCMAVGKHTFEITYDDISTGASISQNTRF---QRFEVS 1553
Query: 311 EQGEYERKSSLVLTNAQESDSGRFYCVAENRAG 343
G +L++ D G++ C +N+ G
Sbjct: 1554 SNG------TLIIHKVIPLDQGQYLCSVQNQFG 1580
Score = 41 (19.5 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 451 ISPNGQLPNKTLH-SVINI-SNPDLI 474
I PNG + NK L+ S I++ SN L+
Sbjct: 604 ILPNGSIVNKWLNISRISVASNGSLV 629
Score = 37 (18.1 bits), Expect = 5.6e-13, Sum P(4) = 5.6e-13
Identities = 33/134 (24%), Positives = 48/134 (35%)
Query: 473 LINDTRKPEGL-SPEPHNDDVL-FQNNYWNQNIRQPTNSELGFDSNDKTPIIDGVSIGGE 530
++++T KP L S N +V F NI T S G K P + +
Sbjct: 1308 IVHETTKPTRLPSVSTDNREVTAFNMPVSKANILATTTSTTGI----KPPTVHTYML--- 1360
Query: 531 LDDNYPPD-YGLPIVGQGQNEL-LP----NNI----HPNAKTLRVWQRGVPVLPPVNALK 580
YP PI+G+ NE +P N N + + + PPV
Sbjct: 1361 ----YPTTPTSEPILGESYNENHIPYDDKNRFVTTGQENISKAELSKTYIRARPPVTQFP 1416
Query: 581 RVLSRGSPDEGYQE 594
L+ S + G QE
Sbjct: 1417 YQLTSASKETGSQE 1430
>UNIPROTKB|F1SH46 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:IAPYQTR
EMBL:CU466936 Ensembl:ENSSSCT00000012847 Uniprot:F1SH46
Length = 979
Score = 213 (80.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 64/229 (27%), Positives = 103/229 (44%)
Query: 17 CPSTCICKWKGGKQWM--ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + C+++ I E P + L +S N +Q + + F
Sbjct: 374 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I + GA L NL + L+ N + + F+ ++ L L N
Sbjct: 434 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ AF +P L L ++ + L + +AF G SL + L N + PV V E
Sbjct: 492 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 550
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLS 239
L ++ I+L++NPW C C++ K W+ +V V C PE L+
Sbjct: 551 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLT 599
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
C C C+ K + C K I + E L + N+++ L +F L
Sbjct: 45 CFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKLYTNSFLH--LN 102
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
N + L + I +GA +GL L + L +N L + TF + L L N I
Sbjct: 103 NAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNETFLGLESLEYLQADYNVI 162
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+IE GAF+ + L L ++++ + + F A SL + L GNRL R + +
Sbjct: 163 KRIESGAFRNLSKLRVLILNDNLIPMLPTNLFK-AVSLTHLDLRGNRLKVLFYRGMLDHI 221
Query: 196 --KLMMIELHDNPWVCDCNMRSIKMWL 220
LM ++L +NPW C C + +K WL
Sbjct: 222 GRSLMELQLEENPWNCTCEIVQLKSWL 248
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 209 (78.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 59/191 (30%), Positives = 91/191 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP+ C+C + + C + L +P+ TQ L + GNNL +P AF+ L
Sbjct: 41 CPAACVCSYDDDADELSVFCSSRNLTRLPDGVPGG-TQALWLDGNNLSSVPPAAFQN--L 97
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+L L L +G ++ AL GL NL + L N L S+ TF L L L+ N
Sbjct: 98 SSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNR 157
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+S++E G F+ + L L++ + L + AF G SL + L GNRL++ L
Sbjct: 158 LSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGL 217
Query: 195 LKLMMIELHDN 205
+L ++L N
Sbjct: 218 AELRELDLSRN 228
Score = 178 (67.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 56/186 (30%), Positives = 91/186 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + G+ L + F GL L++LFL + I+ +L GL L+E+DL+ N LT
Sbjct: 391 LHLEGSCLGRIRPHTF--TGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTH 448
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P FQ + L L L+RN ++++ A + LD+S +RLE + L
Sbjct: 449 LPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRL 508
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW-LADKKNVP--VQP 230
+ L N L F + P L+ + +E NPW C C +++++ + L + VP VQ
Sbjct: 509 RYLSLRNNSLRTFTPQP--PGLERLWLE--GNPWDCGCPLKALRDFALQNPSAVPRFVQA 564
Query: 231 ACTGPE 236
C G +
Sbjct: 565 ICEGDD 570
Score = 176 (67.0 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 49/152 (32%), Positives = 80/152 (52%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L++ N+L +LP AFR GL +L++L LA + + GL L E+DLS N L +
Sbjct: 175 LNLGWNSLAVLPDAAFR--GLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRA 232
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I + F + L+ L L RN I+ + GAF + L LD+S +R+ + + F G L
Sbjct: 233 IKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGL 292
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
++L+ N ++ R+ + L L ++L N
Sbjct: 293 RVLRLSHNAIASLRPRTFKDLHFLEELQLGHN 324
Score = 159 (61.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + N ++ L + +F GL L+ L L + ++ +GA GLTN+ ++LS N L +
Sbjct: 319 LQLGHNRIRQLAERSFE--GLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRN 376
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P F+ + L L+L + + +I F + GL +L + ++ L I ++ G L
Sbjct: 377 LPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAEL 436
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L N+L+H P R + L KL + L N
Sbjct: 437 LELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN 468
Score = 156 (60.0 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 55/200 (27%), Positives = 95/200 (47%)
Query: 48 SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
+EL + LD+S N L+ + F + L LQKL+L R I + GA GL L +DLS
Sbjct: 218 AELRE-LDLSRNALRAIKANVFVQ--LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLS 274
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF 167
N + + TF + LR L L+ N I+ + F+ + L +L + +R+ ++ +F
Sbjct: 275 HNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSF 334
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNM-RSIKMWLADKKNV 226
G LE + L+ N+L + L + ++ L N C N+ + L ++
Sbjct: 335 EGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGN---CLRNLPEQVFRGLGKLHSL 391
Query: 227 PVQPACTGPERLSGKVFSDL 246
++ +C G R+ F+ L
Sbjct: 392 HLEGSCLG--RIRPHTFTGL 409
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 48/164 (29%), Positives = 78/164 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N L L F GL +L L L + + A GL +L E+ L+ N L
Sbjct: 151 LGLSNNRLSRLEDGLFE--GLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAY 208
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ F + LR+L+L+RN + I+ F +P L KL + + + ++P AF G K+L
Sbjct: 209 LQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKAL 268
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIK 217
+ L+ NR++ + LL L ++ L N + R+ K
Sbjct: 269 RWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNA-IASLRPRTFK 311
Score = 148 (57.2 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
V+++SGN L+ LP++ FR GL L L L +G+I GL+ L + L DN L
Sbjct: 366 VMNLSGNCLRNLPEQVFR--GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLV 423
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
I + + L +L+L N ++ + FQ + L L +S +RL + +A +
Sbjct: 424 GIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQR 483
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ ++ NRL P + PL +L + L +N
Sbjct: 484 AFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNN 516
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L +P+A L + L ++GN L L F +GL L++L L+R + I +
Sbjct: 182 LAVLPDAAFRGLGSLRELVLAGNRLAYLQPALF--SGLAELRELDLSRNALRAIKANVFV 239
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L L ++ L NL+ ++ F ++ LR L+L+ N ++ + + F + GL L +S
Sbjct: 240 QLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSH 299
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ + + P F LE ++L NR+ RS E L +L ++ L N
Sbjct: 300 NAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHN 348
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+VL + N LQ + AF GL N+ + L+ + + GL L + L + L
Sbjct: 341 EVLTLDHNQLQEVKAGAF--LGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCL 398
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
I TF + LR L L N + IE+ + + L++LD++ ++L H+ F G
Sbjct: 399 GRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLG 458
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
LE + L+ NRL+ P ++ PL + +++ N
Sbjct: 459 KLEYLLLSRNRLAELPADALGPLQRAFWLDVSHN 492
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 40/152 (26%), Positives = 70/152 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD+S N + L ++ F GLL L+ L L+ I + L L E+ L N +
Sbjct: 271 LDLSHNRVAGLLEDTF--PGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQ 328
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ +F+ + L L L N + +++ GAF + + +++S + L ++ + F G L
Sbjct: 329 LAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKL 388
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
S+ L G+ L + L L + L DN
Sbjct: 389 HSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDN 420
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 38/152 (25%), Positives = 70/152 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + N L+ L F L L L+ + +++ G +GL +L +++L N L
Sbjct: 127 LHLERNQLRSLALGTFAHTPAL--ASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAV 184
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P F+ + LR+L LA N ++ ++ F + L +LD+S + L I F L
Sbjct: 185 LPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRL 244
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ + L+ N ++ + L L ++L N
Sbjct: 245 QKLYLDRNLIAAVAPGAFLGLKALRWLDLSHN 276
>RGD|1588563 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] REFSEQ:NM_001106947 Ncbi:NP_001100417
Length = 836
Score = 211 (79.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 62/213 (29%), Positives = 102/213 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C CK + C++K + ++ E P+ + L ++GNN++ + F
Sbjct: 342 CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELTPKPLNAKKLHVNGNNIKDVDISDFTEFE 401
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I LTNL + L+ N + + F + L+ L L N
Sbjct: 402 GLDL--LHLGSNQITAIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYN 459
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I G F +P L L ++ + L+ + F+GA L + L N+ + PV V +
Sbjct: 460 LIKEILAGTFDSLPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMYLPVSGVLD 518
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN 225
L L I+L NPW C C++ ++K+WL +K N
Sbjct: 519 QLQSLTQIDLEGNPWDCTCDLVALKLWL-EKLN 550
Score = 196 (74.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 56/200 (28%), Positives = 96/200 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+ N L IL F + L L + I+ GA GL+ L ++ L++N L
Sbjct: 64 LNFQNNFLNILYPNTF--VNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKI 121
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ + TF + L L N I IE+GAF + L L ++++ + + F A SL
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFA-SL 180
Query: 174 ESIKLNGNRLSHFPVRSV-EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQPA 231
+ + GNR+ P V E + +++ ++L DNPW C C++ +K WL + N+ + A
Sbjct: 181 THLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGEA 240
Query: 232 -CTGPERLSGKVFSDLHADD 250
C P L G++ + + +
Sbjct: 241 ICETPSDLYGRLLKETNKQE 260
Score = 54 (24.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 420 NKTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHSVIN----ISNPDLIN 475
NK L P+ S F R PPS +PNG TLH ++ +NP I+
Sbjct: 257 NKQ-ELCPMGTGSDFDVR--ILPPSQLENGFTTPNGHTTQTTLHRLVTKPPKTTNPSKIS 313
Query: 476 DTRKPEGLSPEPHNDDVLFQ 495
+ LS + V +Q
Sbjct: 314 GIVAGKALSNRNLSQIVSYQ 333
>RGD|1310957 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10116 "Rattus norvegicus" [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISO]
[GO:0021756 "striatum development" evidence=ISO] [GO:0030534 "adult
behavior" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0048813 "dendrite morphogenesis" evidence=ISO]
[GO:0072358 "cardiovascular system development" evidence=ISO]
REFSEQ:NM_001107284 Ncbi:NP_001100754
Length = 958
Score = 221 (82.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 88/364 (24%), Positives = 157/364 (43%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + + C+++ + +I E P+ + + ++ N + ++ + F A
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYITVVRRTDFLEAT 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I A L NL + L+ N + + F ++ L+ L L N
Sbjct: 434 GLDL--LHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ G F VP L L ++ ++L+ + F+G L + L N + PV V +
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLR-LNLRSNSFTSLPVSGVLD 550
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQPA-CTGPERLSG----KVFSDL 246
L L+ I+LHDNPW C C + +K+W+ K V V C P++ + + S+L
Sbjct: 551 QLTSLIQIDLHDNPWDCTCEVVGMKLWIEQLKVGVLVDEVICKAPKKFAETYMRSIKSEL 610
Query: 247 HADDFACKPEIRMDSRYVEAVSSENA--TVVCRVDSI-PPAAISWYWNGRLLLNNTAFSS 303
D++ ++ S NA T +++S PA + + + S
Sbjct: 611 LCPDYSDVVVSTPTPSSIQLPSRTNAAATPAVKLNSTGTPAGLGAGTGASSVPLSVLILS 670
Query: 304 YQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVTYRGVGLPFL 363
+F++ LV+ +++ S + N + ++ N V Y G G
Sbjct: 671 LLLVFIMSVFVAAGLFVLVMKRRKKNQSDH---TSTNNSDVSSFNMQYSV-YGGGGGG-- 724
Query: 364 GGGH 367
GGGH
Sbjct: 725 GGGH 728
Score = 208 (78.3 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 70/250 (28%), Positives = 115/250 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA--PESELTQVLDMSGNNL-QILPKEAFRRAG 73
C + C C+ K G + C ++ +I++ E P + +L +SGN L ++ P E G
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLL-LSGNLLNRLYPNEFVNYTG 106
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L L I I++GA GL L + L++N L + TF + L L + N
Sbjct: 107 A---SILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYN 163
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-VRSVE 192
IS IE AF + L L ++++ L + F L + L GNRL P V ++
Sbjct: 164 YISVIEPNAFGKLHMLQVLILNDNLLSGLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQ 222
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLSGKVFSDLHADD 250
+ K++ ++L +NPW C C + S+K WL + C P RL G+ ++ +
Sbjct: 223 HMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQE 282
Query: 251 FACKPEIRMD 260
C ++ D
Sbjct: 283 L-CPRKLISD 291
Score = 38 (18.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 413 GNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYH 446
G+ HA V+ S P ++T + + P P H
Sbjct: 727 GHPHAHVHHRGSALPKVKTPAGHVYEYIPHPLGH 760
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 211 (79.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/154 (34%), Positives = 81/154 (52%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+VL + N L+ +P EA R GL LQ L L HI + + +GL L + L DN+L
Sbjct: 108 KVLTLQNNQLKTVPSEAIR--GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNIL 165
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T +P ++ L+ L LA N IS I AF + LV L + ++++ +S F G
Sbjct: 166 TEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLD 225
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+LE++ LN N L FP ++++ L L + H N
Sbjct: 226 NLETLDLNYNNLDEFP-QAIKALPSLKELGFHSN 258
Score = 198 (74.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 55/189 (29%), Positives = 96/189 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
C + C C G + ++C K L +PE S TQ LD+S NN+ LP++AF+ L
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGL-SAFTQALDISMNNITQLPEDAFKNFPFL- 83
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
++L LA + I AL GL L + L +N L ++PS + + L+ L L N I+
Sbjct: 84 -EELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ + +F+ + L L + ++ L + + +L+++ L N +S P + L
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSS 202
Query: 197 LMMIELHDN 205
L+++ LH+N
Sbjct: 203 LVVLHLHNN 211
Score = 150 (57.9 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 48/172 (27%), Positives = 85/172 (49%)
Query: 39 LITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L T+P L+ Q L + N++ +P+++F GL+ L+ L+L + ++ L
Sbjct: 117 LKTVPSEAIRGLSALQSLRLDANHITSVPEDSFE--GLVQLRHLWLDDNILTEVPVRPLS 174
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L L + L+ N ++SIP F ++ L L+L N I + + F + L LD++
Sbjct: 175 NLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNY 234
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV--EPLLKLMMIELHDNP 206
+ L+ P+A SL+ + + N +S P + PLL+ I L+DNP
Sbjct: 235 NNLDEF-PQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRT--IHLYDNP 283
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/160 (30%), Positives = 72/160 (45%)
Query: 31 WMECRDKFLITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIG 88
W++ D L +P P S L Q L ++ NN+ +P AF L +L L L I
Sbjct: 159 WLD--DNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAF--TNLSSLVVLHLHNNKIK 214
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
+ DGL NL +DL+ N L P +++ L++L N IS I GAF P
Sbjct: 215 SLSQHCFDGLDNLETLDLNYNNLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFAGNPL 273
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSH-FP 187
L + + ++ L + AF L S+ + G L FP
Sbjct: 274 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFP 313
Score = 143 (55.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 44/151 (29%), Positives = 74/151 (49%)
Query: 72 AGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLA 131
AG ++L+ L L I I L +DLS N + +PS F R L +++L
Sbjct: 316 AGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPS--FNGCRALEEISLQ 373
Query: 132 RNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV 191
RN IS I++ FQ + L LD+S + + I AF ++ ++ ++ N L+ FP +
Sbjct: 374 RNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGL 433
Query: 192 EPLLKLMMI---ELHDNPWVCD-CNMRSIKM 218
L +L ++ +L D D N+RS+ +
Sbjct: 434 NGLNQLKLVGNFQLKDALAARDFANLRSLSV 464
Score = 135 (52.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 41/152 (26%), Positives = 75/152 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++GN+L + +A +GL L+ L L + + S A+ GL+ L + L N +TS
Sbjct: 86 LQLAGNDLSFIHPKAL--SGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS 143
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P +F+ + LR L L N ++++ +P L L ++ + + I AFT SL
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSL 203
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L+ N++ + L L ++L+ N
Sbjct: 204 VVLHLHNNKIKSLSQHCFDGLDNLETLDLNYN 235
Score = 122 (48.0 bits), Expect = 0.00082, P = 0.00082
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++G + +P + + +L + L L+ I + S +G L EI L N ++
Sbjct: 324 LTLTGTKISSIPDDLCQNQKML--RTLDLSYNDIRDLPS--FNGCRALEEISLQRNQISL 379
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I TFQ + LR L+L+RN I +I GAF + + LD+S + L E G L
Sbjct: 380 IKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNG---L 436
Query: 174 ESIKLNGN 181
+KL GN
Sbjct: 437 NQLKLVGN 444
Score = 51 (23.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 491 DVLFQN-NYWNQNIRQ-PTNSELGFDSNDKTPIIDGVSIGGEL 531
D+ + N + + Q I+ P+ ELGF SN + I DG G L
Sbjct: 231 DLNYNNLDEFPQAIKALPSLKELGFHSNSISVIPDGAFAGNPL 273
>MGI|MGI:2679447 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] MGI:MGI:2679447 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH466547 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 CTD:22865
eggNOG:NOG292495 OMA:IAPYQTR OrthoDB:EOG473PQR EMBL:AB097572
EMBL:AK158856 EMBL:BC066059 IPI:IPI00329845 RefSeq:NP_942564.2
UniGene:Mm.331076 ProteinModelPortal:Q810B9 SMR:Q810B9
PhosphoSite:Q810B9 PaxDb:Q810B9 PRIDE:Q810B9
Ensembl:ENSMUST00000059407 GeneID:386750 KEGG:mmu:386750
InParanoid:Q6NZM5 NextBio:405558 Bgee:Q810B9 CleanEx:MM_SLITRK3
Genevestigator:Q810B9 GermOnline:ENSMUSG00000048304 Uniprot:Q810B9
Length = 980
Score = 211 (79.3 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 64/229 (27%), Positives = 103/229 (44%)
Query: 17 CPSTCICKWKGGKQWM--ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + C+++ I E P + L +S N +Q + + F
Sbjct: 374 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I + GA L NL + L+ N + + F+ ++ L L N
Sbjct: 434 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ AF +P L L ++ + L + +AF G SL + L N + PV V E
Sbjct: 492 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 550
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLS 239
L ++ I+L++NPW C C++ K W+ +V V C PE L+
Sbjct: 551 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRTPENLT 599
Score = 170 (64.9 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
C C C+ K + C K I + E L + N+++ L +F L
Sbjct: 45 CFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRRLYTNSFLH--LN 102
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
N + L + I +GA +GL L + L +N L + TF + L L N I
Sbjct: 103 NAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVI 162
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+IE GAF+ + L L ++++ + + F A SL + L GNRL R + +
Sbjct: 163 KRIESGAFRNLSKLRVLILNDNLIPVLPTNLFK-AVSLTHLDLRGNRLKVLFYRGMLDHI 221
Query: 196 --KLMMIELHDNPWVCDCNMRSIKMWL 220
LM ++L +NPW C C + +K WL
Sbjct: 222 GRSLMELQLEENPWNCTCEIVQLKSWL 248
>MGI|MGI:1917943 [details] [associations]
symbol:Gpr125 "G protein-coupled receptor 125" species:10090
"Mus musculus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0009897 "external side of plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000203 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR007110 InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825
Pfam:PF02793 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00303 MGI:MGI:1917943 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0009897 GO:GO:0004930 GO:GO:0007218
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 eggNOG:NOG307919 HOVERGEN:HBG051777
GeneTree:ENSGT00390000016104 HOGENOM:HOG000112767 CTD:166647
KO:K08462 OMA:HHIPVNV OrthoDB:EOG42820R EMBL:AC102501 EMBL:AC130666
EMBL:BC019649 EMBL:BC052391 EMBL:BC058251 IPI:IPI00751912
RefSeq:NP_598672.1 UniGene:Mm.272974 ProteinModelPortal:Q7TT36
SMR:Q7TT36 STRING:Q7TT36 MEROPS:S63.950 PhosphoSite:Q7TT36
PRIDE:Q7TT36 Ensembl:ENSMUST00000030971 GeneID:70693 KEGG:mmu:70693
UCSC:uc008xjz.2 InParanoid:Q7TT36 NextBio:332107 Bgee:Q7TT36
CleanEx:MM_GPR125 Genevestigator:Q7TT36
GermOnline:ENSMUSG00000029090 Uniprot:Q7TT36
Length = 1310
Score = 212 (79.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 64/263 (24%), Positives = 125/263 (47%)
Query: 96 DGLTN-LIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154
D L N + + LS+N ++ + + +F + L L+L N IS+I GAF + L +LD+
Sbjct: 66 DTLPNRTVTLILSNNKISELKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDL 125
Query: 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMR 214
+ +R+ ++ + F G +L + L+GN + + + L L +E +CDCN+
Sbjct: 126 TNNRIGCLNADVFRGLTNLVRLNLSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNIL 185
Query: 215 SIKMWLADKKNVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENAT 273
+ W+ ++ N+ V+ C P+ L + + + + C P + + S Y+ + +
Sbjct: 186 WMHRWVKER-NITVRDTRCVYPKSLQAQPVTGVKQELLTCDPPLELPSFYM---TPSHRQ 241
Query: 274 VVCRVDSIP----------PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK---SS 320
VV DS+P + WY +GR++ + + Q IFV + + S+
Sbjct: 242 VVFEGDSLPFQCMASYIDQDMQVLWYQDGRIVETDES----QGIFVEKSMIHNCSLIASA 297
Query: 321 LVLTNAQESDSGRFYCVAENRAG 343
L ++N Q +G + C + + G
Sbjct: 298 LTISNIQAGSTGNWGCHVQTKRG 320
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 207 (77.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 53/191 (27%), Positives = 88/191 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + GN+L+ L F + NL++L+L HI + A L L + LS N L+
Sbjct: 274 LTLFGNSLKELSPGVF--GPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSY 331
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I F + LR+L+L N + ++ F+ + L + + +RL + F L
Sbjct: 332 ISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGL 391
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK---NVPVQP 230
+I+L N L + P+ + L L + L+DNPW CD N+ + WL + P
Sbjct: 392 MTIQLQNNNLENLPLGIFDHLGNLCELRLYDNPWRCDSNILPLHDWLILNRARLGTDTLP 451
Query: 231 ACTGPERLSGK 241
C+ P + G+
Sbjct: 452 VCSSPASVRGQ 462
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 42 IPEAPESELTQV-----LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
I E PE + + L M N L + AFR G +L+ L LA + +
Sbjct: 65 ITELPEDKFLNISALIALKMEKNELANIMPGAFRNLG--SLRHLSLANNKLKNLPVRLFQ 122
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
+ NL + LS+N L I F L++L L N + I +G F + GL KL++
Sbjct: 123 DVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGN 182
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ H+SP F +L+ ++L NRLS P+ + + L L + L +N
Sbjct: 183 NGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQEN 231
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 48/189 (25%), Positives = 84/189 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CPS C C + + +EC ++ +P +P L + ++ LP++ F L
Sbjct: 25 CPSECTCS-RASQ--VECTGAQIVAMP-SPLPWNAMSLQILNTHITELPEDKFLNISALI 80
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
K+ + + I GA L +L + L++N L ++P FQ V L L L+ N +
Sbjct: 81 ALKM--EKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLV 138
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+I+ F L +L + + LE+I F L + L N +H R + L
Sbjct: 139 QIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGN 198
Query: 197 LMMIELHDN 205
L ++ L++N
Sbjct: 199 LQVLRLYEN 207
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L +S N++ LP F + L +L KL L + ++ G + NL E+ L +N +
Sbjct: 248 QRLYLSNNHISHLPPGIFMQ--LPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHI 305
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
TS+P F + L+ L L+ N +S I GAF + L +L + + L+ + F
Sbjct: 306 TSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLA 365
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+L ++ L NRL P + LM I+L +N
Sbjct: 366 NLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNN 399
Score = 156 (60.0 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 48/169 (28%), Positives = 76/169 (44%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L+ I A S+ + + L + GNNL+ +P+ F L+ L KL L +
Sbjct: 137 LVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDH--LVGLTKLNLGNNGFTHLSPRVFQ 194
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L NL + L +N L+ IP TF ++ L++L L N I + G F L +L +S
Sbjct: 195 HLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSN 254
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ + H+ P F L + L GN L P+ L + L++N
Sbjct: 255 NHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNN 303
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 52 QVLDMSGNNL-QILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL 110
+ L +S N L QI P + F + NL++L L ++ I G D L L +++L +N
Sbjct: 128 ETLLLSNNQLVQIQPAQ-FSQFS--NLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNG 184
Query: 111 LTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
T + FQ + L+ L L N +S I G F + L +L + E+++ +SP F
Sbjct: 185 FTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNN 244
Query: 171 KSLESIKLNGNRLSHFP 187
++L+ + L+ N +SH P
Sbjct: 245 RNLQRLYLSNNHISHLP 261
Score = 147 (56.8 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 51/181 (28%), Positives = 77/181 (42%)
Query: 27 GGKQWMECRDKFLITIPEAPESEL--TQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLAR 84
G Q + + L IP L Q L + N + L F NLQ+L+L+
Sbjct: 197 GNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNR--NLQRLYLSN 254
Query: 85 CHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQ 144
HI + G L +L ++ L N L + F + LR+L L N I+ + AF
Sbjct: 255 NHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFS 314
Query: 145 FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHD 204
+ L L +S ++L +ISP AF G +L + L+ N L L L + L +
Sbjct: 315 HLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQN 374
Query: 205 N 205
N
Sbjct: 375 N 375
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 38/130 (29%), Positives = 58/130 (44%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++ N L+ LP F+ NL+ L L+ + QI +NL E+ L N L
Sbjct: 106 LSLANNKLKNLPVRLFQDVN--NLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEY 163
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
IP F + L LNL N + + FQ + L L + E+RL I F +L
Sbjct: 164 IPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNL 223
Query: 174 ESIKLNGNRL 183
+ + L N++
Sbjct: 224 QELALQENQI 233
>UNIPROTKB|Q2KIF2 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein 1"
species:9913 "Bos taurus" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 CTD:116844 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 OMA:RCAGPEA OrthoDB:EOG4TMR2P GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GeneTree:ENSGT00690000102197 EMBL:DAAA02019605 EMBL:BC112660
IPI:IPI00702820 RefSeq:NP_001039642.1 UniGene:Bt.53757
Ensembl:ENSBTAT00000003618 GeneID:514663 KEGG:bta:514663
InParanoid:Q2KIF2 NextBio:20871452 Uniprot:Q2KIF2
Length = 346
Score = 201 (75.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 57/196 (29%), Positives = 94/196 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + GN L+ L EA GL L+ L L+ + + G L+ T+L+ +DLS+N L +
Sbjct: 144 LVLKGNQLKFL--EASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQT 201
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P + L L+L N + + +G P L L ++++RL ++ AF G + L
Sbjct: 202 LPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKL 261
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMM-----IELHDNPWVCDCNMRSIKMWLADKKNVPV 228
+ + L+ N L+ P L K ++ +NPW+CD N+ + WL +N
Sbjct: 262 DMLDLSNNLLTTVPTGLWTSLGKAARNLKDGFDISNNPWICDQNLADLYRWLVANENKMF 321
Query: 229 ---QPACTGPERLSGK 241
C GPE L G+
Sbjct: 322 FRNHTRCAGPEALKGQ 337
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 37 KFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
KFL+ +P+ +VLD++ N+L L FR + L L L + +++ L
Sbjct: 109 KFLLPVPQL------KVLDLTRNSLTGLFPGFFRVSAALCT--LVLKGNQLKFLEASWLH 160
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
GL L +DLS+N L S+P ++ L L+L+ N + + + L +L +
Sbjct: 161 GLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEG 220
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+RL+ + L + LN NRL+ + L KL M++L +N
Sbjct: 221 NRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKLDMLDLSNN 269
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 52 QVLDMSGNNLQ-ILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL 110
Q L +S N L+ PK + L+ L L R + + G L + L N
Sbjct: 94 QELHLSSNRLEDFSPKFLLP---VPQLKVLDLTRNSLTGLFPGFFRVSAALCTLVLKGNQ 150
Query: 111 LTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
L + + ++ LR L+L+ N + + G + L+ LD+S ++L+ + P+ G
Sbjct: 151 LKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPDLLRGP 210
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+LE + L GNRL + P KL + L+DN
Sbjct: 211 LNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDN 245
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 46 PESELTQVLD-MSGNNLQILPKEAFRRAGLLNLQKLFLAR--CHIGQIDSGALDGLTNLI 102
P E V ++G+++ P + L +FLA ++ Q+ + L G+ NL
Sbjct: 37 PNPEACLVFSSVNGSSISCQPPAQIPHS--LPADTIFLAVEFFNLTQLPADFLQGVPNLQ 94
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI 162
E+ LS N L V L+ L+L RN ++ + G F+ L L + ++L+ +
Sbjct: 95 ELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTGLFPGFFRVSAALCTLVLKGNQLKFL 154
Query: 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
G K+L + L+ N+L P +E L+ ++L +N
Sbjct: 155 EASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNN 197
>UNIPROTKB|F1RQ64 [details] [associations]
symbol:LOC100525800 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:TVFVAFC EMBL:CU928352 RefSeq:XP_003135482.1
Ensembl:ENSSSCT00000023710 Ensembl:ENSSSCT00000034435
GeneID:100525800 KEGG:ssc:100525800 Uniprot:F1RQ64
Length = 838
Score = 209 (78.6 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 61/213 (28%), Positives = 101/213 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C CK + C++K + ++ E P+ + L ++GN+++ + F A
Sbjct: 342 CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPFNAKKLHVNGNSIKDVDISDF--AE 399
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L L L I I LTNL + L+ N + + F + L+ L L N
Sbjct: 400 FEGLDLLHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYN 459
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I G F +P L L ++ + L+ + F+GA L + L N+ + PV V +
Sbjct: 460 LIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMYLPVSGVLD 518
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN 225
L L I+L NPW C C++ ++K+WL +K N
Sbjct: 519 QLQSLTQIDLEGNPWDCTCDLVALKLWL-EKLN 550
Score = 194 (73.4 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 57/201 (28%), Positives = 99/201 (49%)
Query: 54 LDMSGNNLQIL-PKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
L+ N L IL P + ++LQ L + I+ GA GL+ L ++ L++N L
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQ---LGNNKLQNIEGGAFLGLSALKQLHLNNNELK 120
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ + TF + L L N I IE+GAF + L L ++++ + + F A S
Sbjct: 121 ILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFA-S 179
Query: 173 LESIKLNGNRLSHFPVRSV-EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQP 230
L + + GNR+ P V E + +++ ++L DNPW C C++ +K WL + N+ +
Sbjct: 180 LTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGE 239
Query: 231 A-CTGPERLSGKVFSDLHADD 250
A C P L G++ + + +
Sbjct: 240 AICETPSDLYGRLLKETNKQE 260
Score = 58 (25.5 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 420 NKTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHSVIN----ISNPDLIN 475
NK L P+ S F R PPS +PNG +LH ++ +NP I+
Sbjct: 257 NKQ-ELCPMGTGSDFDVR--ILPPSQLENSYTTPNGHTTQTSLHRLVTKPPKTTNPSKIS 313
Query: 476 DTRKPEGLSPEPHNDDVLFQ 495
+GLS + V +Q
Sbjct: 314 GIVAGKGLSTRNLSQIVSYQ 333
>UNIPROTKB|F1PA06 [details] [associations]
symbol:GPR125 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] InterPro:IPR001611
InterPro:IPR000203 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR007110 InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825
Pfam:PF02793 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00303 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004930
GO:GO:0007218 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00390000016104 OMA:HHIPVNV
EMBL:AAEX03002600 EMBL:AAEX03002601 Ensembl:ENSCAFT00000026181
Uniprot:F1PA06
Length = 1230
Score = 211 (79.3 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 62/252 (24%), Positives = 120/252 (47%)
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPE 165
LS+N ++ + + +F + L L+L N IS I+ GAF + L +LD++ +R+ ++ +
Sbjct: 2 LSNNKISELKNGSFSGLSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNAD 61
Query: 166 AFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN 225
F G +L + L+GN S + + L L +E +CDCN+ + W+ ++ N
Sbjct: 62 IFRGLTNLVRLNLSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKER-N 120
Query: 226 VPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIP-- 282
+ V+ C P+ L + + + + C P + + S Y+ + + VV DS+P
Sbjct: 121 ITVRDTRCVYPKSLQAQPVTGVKQELLTCDPPLELPSFYM---TPSHRQVVFEGDSLPFQ 177
Query: 283 --------PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK---SSLVLTNAQESDS 331
+ WY +GR++ + + Q IFV + + S+L ++N Q +
Sbjct: 178 CMASYIDQDMQVLWYQDGRIVETDES----QGIFVEKNMIHNCSLIASALTISNIQAGST 233
Query: 332 GRFYCVAENRAG 343
G + C + + G
Sbjct: 234 GNWGCHVQTKRG 245
>UNIPROTKB|F1MK80 [details] [associations]
symbol:GPR125 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000203 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR007110 InterPro:IPR017981
Pfam:PF00002 Pfam:PF01825 Pfam:PF02793 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00303 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00390000016104 OMA:HHIPVNV EMBL:DAAA02017074
EMBL:DAAA02017075 EMBL:DAAA02017076 IPI:IPI00687710
Ensembl:ENSBTAT00000006107 Uniprot:F1MK80
Length = 1235
Score = 211 (79.3 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 62/252 (24%), Positives = 120/252 (47%)
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPE 165
LS+N ++ + + +F + L L+L N IS I+ GAF + L +LD++ +R+ ++ +
Sbjct: 2 LSNNKISELKNGSFSGLSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNAD 61
Query: 166 AFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN 225
F G +L + L+GN S + + L L +E +CDCN+ + W+ ++ N
Sbjct: 62 IFRGLTNLVRLNLSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKER-N 120
Query: 226 VPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDSIP-- 282
+ V+ C P+ L + + + + C P + + S Y+ + + VV DS+P
Sbjct: 121 ITVRDTRCVYPKSLQAQPVTGVKQELLTCDPPLELPSFYM---TPSHRQVVFEGDSLPFQ 177
Query: 283 --------PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK---SSLVLTNAQESDS 331
+ WY +GR++ + + Q IFV + + S+L ++N Q +
Sbjct: 178 CMASYIDQDMQVLWYQDGRIVETDES----QGIFVEKNMIHNCSLIASALTISNIQAGST 233
Query: 332 GRFYCVAENRAG 343
G + C + + G
Sbjct: 234 GNWGCHVQTKRG 245
>RGD|727911 [details] [associations]
symbol:Amigo2 "adhesion molecule with Ig like domain 2"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0007156 "homophilic
cell adhesion" evidence=IPI] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=IPI] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043069 "negative regulation
of programmed cell death" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:727911 GO:GO:0005634 GO:GO:0043066
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007157
InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156
GeneTree:ENSGT00530000063545 CTD:347902 OrthoDB:EOG43XV36
EMBL:AY237730 EMBL:AB078879 IPI:IPI00331944 RefSeq:NP_877968.2
UniGene:Rn.98123 ProteinModelPortal:Q7TNJ4 STRING:Q7TNJ4
PRIDE:Q7TNJ4 Ensembl:ENSRNOT00000009199 GeneID:300186
KEGG:rno:300186 UCSC:RGD:727911 InParanoid:Q7TNJ4 NextBio:646483
Genevestigator:Q7TNJ4 GermOnline:ENSRNOG00000007032 Uniprot:Q7TNJ4
Length = 520
Score = 200 (75.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 61/209 (29%), Positives = 100/209 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ CIC + C +K L +P L + LD+S N + +L + + +
Sbjct: 40 CPTACIC----ATDIVSCTNKNLSKVP-GNLFRLIKRLDLSYNRIGLLDAD-WIPVSFVK 93
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L + +I I +G+ NL +DLS N L S+ S FQ ++ L L L N IS
Sbjct: 94 LSTLIVRHNNITSISTGSFSTTPNLKCLDLSSNRLKSVKSAMFQELKVLEVLLLYNNHIS 153
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIK---LNGNRLSHFPVRSVE- 192
++ AF + L KL +S + L + + G L + ++ N+++ P+ +
Sbjct: 154 YLDPAAFGGLSHLQKLYLSGNFLTKFPMDLYVGRFKLADLTFLDVSYNQIASIPMHHINL 213
Query: 193 -PLLKLMMIELHDNPWVCDCNMRSI-KMW 219
P +L I LH NP+VCDC++ S+ W
Sbjct: 214 VPGKQLRGIFLHGNPFVCDCSLYSLLTFW 242
Score = 50 (22.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
SLV+ N D+G + C+A NR + + + +
Sbjct: 346 SLVIENPGFEDAGVYSCIAMNRQRLLNETVDIMI 379
Score = 38 (18.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 451 ISPNGQ-LPNKTLHSVINISN 470
I+ N Q L N+T+ +IN+SN
Sbjct: 363 IAMNRQRLLNETVDIMINVSN 383
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 206 (77.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 60/209 (28%), Positives = 99/209 (47%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNL--IEIDLSDNLL 111
L +S N L+ LPK F G L++L L + + + A LT L +E+ LS L
Sbjct: 271 LTLSENPLEELPKVLFGEIG--GLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRL- 327
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
+++P F+ + L+ L L+ ++ + G + + L + + +RL + F
Sbjct: 328 SALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLS 387
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQ-- 229
SLE ++L+ N+L P + E L +L + L NPW CDC + WL + +
Sbjct: 388 SLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHNPWRCDCGLGPFLAWLRRHAGLVGRAE 447
Query: 230 -PACTGPERLSGKVFSDLHADDFAC-KPE 256
P C GP +G++ L A D C +PE
Sbjct: 448 PPRCHGPGPHAGRLLWTLQAGDLGCPRPE 476
Score = 174 (66.3 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 50/156 (32%), Positives = 75/156 (48%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGL-LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL 110
++LD+SGNNL LP+ F G+ + LQKL L + ++SG LD L L E+ L N
Sbjct: 173 KLLDLSGNNLTHLPEGLF---GVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNH 229
Query: 111 LTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
L SI F +R L L L+ N + + F L L +SE+ LE + F
Sbjct: 230 LRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEI 289
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L ++L +L P + L L ++E+ +P
Sbjct: 290 GGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSP 325
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
L + L + GN L+ L + F++ L++LQ+LFL + + + + L NL +DLS N
Sbjct: 123 LLEQLFLDGNELKSLDQNLFQK--LVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGN 180
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG 169
LT +P F L+ L L N ++ +E G + L +L + + L I P AF
Sbjct: 181 NLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDR 240
Query: 170 AKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
+SL S+ L+ NRL P L + L +NP
Sbjct: 241 LRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENP 277
Score = 165 (63.1 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAP-ESELTQVL--DMSGNNLQILPKEAFRRAG 73
CP TC C ++ Q C + I + LT +L M LQ +F +
Sbjct: 21 CPPTCRCAFRDAAQ---CSRGTVAGIAALGLPTNLTHILLFQMGRGTLQ---NNSF--SD 72
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
+ LQ+L L+ H+ I G + L + LS N +T +PS ++ L L L N
Sbjct: 73 MTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGN 132
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
+ +++ FQ + L +L +++++L + FT +L+ + L+GN L+H P
Sbjct: 133 ELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGV 192
Query: 194 LLKLMMIELHDN 205
+KL + LH N
Sbjct: 193 QVKLQKLLLHSN 204
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 46/161 (28%), Positives = 80/161 (49%)
Query: 48 SELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEID 105
S++T Q L +S +++ + F + L+ L L+R I + S LD L L ++
Sbjct: 71 SDMTVLQRLLLSDSHVSAIAPGTFNDP--IKLKTLRLSRNKITHLPSALLDNLVLLEQLF 128
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPE 165
L N L S+ FQ + L++L L +N ++ + F + L LD+S + L H+ PE
Sbjct: 129 LDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHL-PE 187
Query: 166 AFTGAK-SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
G + L+ + L+ NRL+ ++ L L ++LH N
Sbjct: 188 GLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTN 228
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/136 (30%), Positives = 63/136 (46%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L ++ N L LP F G NL+ L L+ ++ + G L ++ L N L
Sbjct: 149 QELFLNQNQLAFLPASLFTHLG--NLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRL 206
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
S+ S S+R L +L L N + I GAF + L L +SE+RLE + F +
Sbjct: 207 ASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSH 266
Query: 172 SLESIKLNGNRLSHFP 187
+L + L+ N L P
Sbjct: 267 NLTFLTLSENPLEELP 282
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/157 (28%), Positives = 75/157 (47%)
Query: 50 LTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN 109
LT+ L + N+L+ + AF R L +L L L+ + + S NL + LS+N
Sbjct: 220 LTE-LQLHTNHLRSIVPGAFDR--LRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSEN 276
Query: 110 LLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSES-RLEHISPEAFT 168
L +P + F + LR+L L + + AF+ + GL L++S S RL + +AF
Sbjct: 277 PLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFR 336
Query: 169 GAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
G L+ + L+ L+ P + L +L + L N
Sbjct: 337 GLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSN 373
>RGD|1308858 [details] [associations]
symbol:Slitrk1 "SLIT and NTRK-like family, member 1"
species:10116 "Rattus norvegicus" [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=ISO]
[GO:0035264 "multicellular organism growth" evidence=ISO]
[GO:0042592 "homeostatic process" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1308858 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH473951 CTD:114798
OMA:NGLPCPG OrthoDB:EOG428211 GeneTree:ENSGT00680000099775
IPI:IPI00373549 RefSeq:NP_001100753.1 UniGene:Rn.31034
Ensembl:ENSRNOT00000012195 GeneID:306147 KEGG:rno:306147
UCSC:RGD:1308858 NextBio:655550 Uniprot:D3Z8D8
Length = 696
Score = 215 (80.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 70/247 (28%), Positives = 113/247 (45%)
Query: 21 CICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNL-QILPKEAFRRAGLLNL 77
C C G ++C K ++ AP S+ + + GN+L ++ P E F A N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLF-LHGNSLTRLFPNE-F--ANFYNA 84
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
L + + +I GA GL + + +++N + S TF + L L N +
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRD 144
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EPLLK 196
I+ GAFQ + L L ++++ + + F + + L GNRL P V E +
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPV-QPACTGPERLSGKVFSDLHADDFACK 254
+ I L DNPW C C++ S+K WL + KN + + C P RL GK ++ D C
Sbjct: 204 IAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVVCEAPTRLQGKDLNETTEQDL-CP 262
Query: 255 PEIRMDS 261
+ R+DS
Sbjct: 263 LKNRVDS 269
Score = 203 (76.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 68/263 (25%), Positives = 112/263 (42%)
Query: 17 CPSTCICKW-KGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C C G M C ++ + ++ + P+ Q L + N + + + F
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRRSHF--VDY 398
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
NL L L +I I++ L +L + + N L ++ F ++ L LN+ N
Sbjct: 399 KNLILLDLGNNNIANIENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 458
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
I I G F +P L L ++ + L + + F G SL + L+ N + PV V +
Sbjct: 459 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLDQ 517
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGKVFSDLHADD 250
L ++ I+LH NPW C C + K W A++ V + C P K F L D+
Sbjct: 518 LTSIIQIDLHGNPWECSCTIVPFKQW-AERLGSEVLMSDLKCETPVNFFRKDFMLLSNDE 576
Query: 251 FACKPEIRMDSRYVEAVSSENAT 273
C P++ S+N+T
Sbjct: 577 I-C-PQLYAKISPTLTSHSKNST 597
Score = 38 (18.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 534 NYPPDYGLPIVGQGQNELLPNN 555
N PP +GLP G + +P +
Sbjct: 332 NKPPVHGLPCPGGCSCDHIPGS 353
>MGI|MGI:2679446 [details] [associations]
symbol:Slitrk1 "SLIT and NTRK-like family, member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007399 "nervous system development" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0030534 "adult behavior" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042592
"homeostatic process" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2679446 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GO:GO:0030534 GO:GO:0035264 InterPro:IPR000372 SMART:SM00013
GO:GO:0042592 CTD:114798 eggNOG:NOG236179 HOVERGEN:HBG056407
OMA:NGLPCPG OrthoDB:EOG428211 EMBL:AB097570 EMBL:AK014285
IPI:IPI00110451 RefSeq:NP_951020.1 UniGene:Mm.257268
ProteinModelPortal:Q810C1 SMR:Q810C1 STRING:Q810C1
PhosphoSite:Q810C1 PaxDb:Q810C1 PRIDE:Q810C1
Ensembl:ENSMUST00000100322 GeneID:76965 KEGG:mmu:76965
GeneTree:ENSGT00680000099775 InParanoid:Q810C1 ChiTaRS:SLITRK1
NextBio:346195 Bgee:Q810C1 CleanEx:MM_SLITRK1 Genevestigator:Q810C1
GermOnline:ENSMUSG00000075478 Uniprot:Q810C1
Length = 696
Score = 215 (80.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 70/247 (28%), Positives = 113/247 (45%)
Query: 21 CICKWKGGKQWMECRDKFLITIPE--APESELTQVLDMSGNNL-QILPKEAFRRAGLLNL 77
C C G ++C K ++ AP S+ + + GN+L ++ P E F A N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLF-LHGNSLTRLFPNE-F--ANFYNA 84
Query: 78 QKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISK 137
L + + +I GA GL + + +++N + S TF + L L N +
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRD 144
Query: 138 IEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EPLLK 196
I+ GAFQ + L L ++++ + + F + + L GNRL P V E +
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 197 LMMIELHDNPWVCDCNMRSIKMWLAD-KKNVPV-QPACTGPERLSGKVFSDLHADDFACK 254
+ I L DNPW C C++ S+K WL + KN + + C P RL GK ++ D C
Sbjct: 204 IAEILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVVCEAPTRLQGKDLNETTEQDL-CP 262
Query: 255 PEIRMDS 261
+ R+DS
Sbjct: 263 LKNRVDS 269
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/206 (27%), Positives = 91/206 (44%)
Query: 17 CPSTCICKW-KGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGL 74
CP C C G M C ++ + ++ + P+ Q L + N + + K F
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHF--VDY 398
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
NL L L +I I++ L +L + + N L ++ F ++ L LN+ N
Sbjct: 399 KNLILLDLGNNNIANIENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 458
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-EP 193
I I G F +P L L ++ + L + + F G SL + L+ N + PV V +
Sbjct: 459 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLDQ 517
Query: 194 LLKLMMIELHDNPWVCDCNMRSIKMW 219
L ++ I+LH NPW C C + K W
Sbjct: 518 LTSIIQIDLHGNPWECSCTIVPFKQW 543
Score = 38 (18.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 534 NYPPDYGLPIVGQGQNELLPNN 555
N PP +GLP G + +P +
Sbjct: 332 NKPPVHGLPCPGGCSCDHIPGS 353
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 211 (79.3 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 43/148 (29%), Positives = 75/148 (50%)
Query: 106 LSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPE 165
L+ N L +P L FQ+ + L L+L+ N + + + AF+ L L + ++++ I
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 166 AFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN 225
AF + LE + LN N ++ PV S + KL LH N CDC++ + WL +
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPT 121
Query: 226 VPVQPACTGPERLSGKVFSDLHADDFAC 253
+ + C+GP L G +++ +F+C
Sbjct: 122 IGLFTQCSGPASLRGLNVAEVQKSEFSC 149
Score = 196 (74.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 87 IGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFV 146
I I GA L IDLS+N + I FQ +R L L L N I+ + +G F +
Sbjct: 207 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGL 266
Query: 147 PGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
L L ++ +++ I P+AF ++L + L N++ + L + + L NP
Sbjct: 267 YTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNP 326
Query: 207 WVCDCNMRSIKMWLAD-KKNVPVQPA---CTGPERLSGKVFSDLHADDFAC 253
++CDCN++ WLAD + P++ C P RL+ K + + F C
Sbjct: 327 FICDCNLK----WLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRC 373
Score = 195 (73.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 44/163 (26%), Positives = 82/163 (50%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L++L +I+LS+N ++ I TF+ + +L+L N + + G F+ + GL
Sbjct: 444 TGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRT 503
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + +R+ I ++FTG +++ + L N ++ + + L L + L NP+ C+C
Sbjct: 504 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNC 563
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
+ + WL +K V P C P+ L D+ DF C+
Sbjct: 564 QLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 606
Score = 192 (72.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
N+ E+ L N T +P + ++L+ ++L+ N IS + +F + L L +S + L
Sbjct: 648 NVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 706
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ I P AF G +SL + L+GN +S + L + + NP CDC++R + W
Sbjct: 707 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 766
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK--PEIRMDSRYVEAVSS 269
+ P C GP + GK+ A F C+ P + + ++ +SS
Sbjct: 767 VKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFECQGPPSLAVQAKCDPCLSS 818
Score = 167 (63.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 51/167 (30%), Positives = 85/167 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEA-FRRAGL 74
CP C C+ +EC L IPE P+S T L ++ N + IL F++ L
Sbjct: 399 CPHKCRCE----ASVVECSGLKLSKIPERIPQS--TTELRLNNNEISILEATGLFKK--L 450
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
+L+K+ L+ + +I+ G +G T++ E+ L+ N L S+ S F+ + LR L L N
Sbjct: 451 SHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNR 510
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
IS I +F + + L + ++ + ISP AF ++L ++ L N
Sbjct: 511 ISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 557
Score = 135 (52.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/143 (27%), Positives = 67/143 (46%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C C + C +K L +P+ +T+ L + GN ++P + +
Sbjct: 620 CPQECACL----DTVVRCSNKHLQALPKGIPKNVTE-LYLDGNQFTLVPGQL---STFKY 671
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
LQ + L+ I + + + ++ L + LS N L IP L FQ +R LR L+L N +S
Sbjct: 672 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVS 731
Query: 137 KIEKGAFQFVPGLVKLDMSESRL 159
+++G F V L L + + L
Sbjct: 732 TLQEGIFADVTSLSHLAIGANPL 754
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 21 CICKWKGGKQWMECRDKF-LITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQK 79
C C QW+ R L T P S + G N+ + K F +G +
Sbjct: 105 CDCHLAWLSQWLRQRPTIGLFTQCSGPAS-------LRGLNVAEVQKSEFSCSGQGEAAQ 157
Query: 80 LFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIE 139
+ C + A+ +N I +D LT+IP+ ++ + ++ L N I I
Sbjct: 158 V--PACTLSSGSCPAMCSCSNGI-VDCRGKGLTAIPANLPET---MTEIRLELNGIKSIP 211
Query: 140 KGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMM 199
GAF L ++D+S +++ I+P+AF G +SL S+ L GN+++ P L L +
Sbjct: 212 PGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQL 271
Query: 200 IELHDNPWVC 209
+ L+ N C
Sbjct: 272 LLLNANKINC 281
Score = 125 (49.1 bits), Expect = 0.00062, P = 0.00062
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 101 LIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLE 160
L +DLS+N L ++P F+ L++L L +N IS IE+GAF+ + GL L ++ + +
Sbjct: 21 LSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNIT 80
Query: 161 HISPEAFTGAKSLESIKLNGNRL 183
I +F L + +L+ N L
Sbjct: 81 TIPVSSFNHMPKLRTFRLHSNHL 103
Score = 41 (19.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKL----FLARCHI 87
+VL ++ NN+ +P +F L +L CH+
Sbjct: 70 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHL 109
>UNIPROTKB|O94933 [details] [associations]
symbol:SLITRK3 "SLIT and NTRK-like protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 GO:GO:0016021 EMBL:CH471052 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AB020655 EMBL:AK290024 EMBL:BC114621
IPI:IPI00016467 RefSeq:NP_055741.2 UniGene:Hs.101745
ProteinModelPortal:O94933 SMR:O94933 STRING:O94933
PhosphoSite:O94933 PRIDE:O94933 Ensembl:ENST00000241274
Ensembl:ENST00000475390 GeneID:22865 KEGG:hsa:22865 UCSC:uc003fej.4
CTD:22865 GeneCards:GC03M164904 H-InvDB:HIX0003827 HGNC:HGNC:23501
HPA:HPA017636 MIM:609679 neXtProt:NX_O94933 PharmGKB:PA134958002
eggNOG:NOG292495 InParanoid:O94933 OMA:IAPYQTR OrthoDB:EOG473PQR
PhylomeDB:O94933 GenomeRNAi:22865 NextBio:43383 ArrayExpress:O94933
Bgee:O94933 CleanEx:HS_SLITRK3 Genevestigator:O94933
GermOnline:ENSG00000121871 Uniprot:O94933
Length = 977
Score = 213 (80.0 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 64/229 (27%), Positives = 103/229 (44%)
Query: 17 CPSTCICKWKGGKQWM--ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + C+++ I E P + L +S N +Q + + F
Sbjct: 373 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 432
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I + GA L NL + L+ N + + F+ ++ L L N
Sbjct: 433 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 490
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ AF +P L L ++ + L + +AF G SL + L N + PV V E
Sbjct: 491 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 549
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLS 239
L ++ I+L++NPW C C++ K W+ +V V C PE L+
Sbjct: 550 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLT 598
Score = 171 (65.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
C C C+ K + C K I + E L + N+++ L +F L
Sbjct: 44 CFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKLYTNSFLH--LN 101
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
N + L + I +GA +GL L + L +N L + TF + L L N I
Sbjct: 102 NAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVI 161
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+IE GAF+ + L L ++++ + + F A SL + L GNRL R + +
Sbjct: 162 KRIESGAFRNLSKLRVLILNDNLIPMLPTNLFK-AVSLTHLDLRGNRLKVLFYRGMLDHI 220
Query: 196 --KLMMIELHDNPWVCDCNMRSIKMWL 220
LM ++L +NPW C C + +K WL
Sbjct: 221 GRSLMELQLEENPWNCTCEIVQLKSWL 247
Score = 44 (20.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 536 PPDYGLPIVGQGQNELLPNNIHPNAKTL 563
PP G ++G Q P H N +TL
Sbjct: 784 PPGMGEALLGSEQFAETPKENHSNYRTL 811
>UNIPROTKB|D3ZZF2 [details] [associations]
symbol:D3ZZF2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000203 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR007110 InterPro:IPR017981
Pfam:PF00002 Pfam:PF01825 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00303
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897
GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00390000016104
CTD:166647 KO:K08462 OMA:HHIPVNV OrthoDB:EOG42820R IPI:IPI00364572
RefSeq:XP_003752785.1 UniGene:Rn.22146 Ensembl:ENSRNOT00000036646
GeneID:305408 KEGG:rno:305408 ArrayExpress:D3ZZF2 Uniprot:D3ZZF2
Length = 1307
Score = 210 (79.0 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 64/263 (24%), Positives = 125/263 (47%)
Query: 96 DGLTN-LIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDM 154
D L N + + LS+N ++ + + +F + L L+L N IS+I GAF + L +LD+
Sbjct: 63 DTLPNRTVTLILSNNKISELKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDL 122
Query: 155 SESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMR 214
+ +R+ ++ + F G +L + L+GN + + + L L +E +CDCN+
Sbjct: 123 TNNRIGCLNADVFRGLTNLVRLNLSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNIL 182
Query: 215 SIKMWLADKKNVPVQPA-CTGPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENAT 273
+ W+ ++ N+ V+ C P+ L + + + + C P + + S Y+ + +
Sbjct: 183 WMHRWVKER-NITVRDTRCVYPKSLQAQPVTGVKQELLTCGPPLELPSFYM---TPSHRQ 238
Query: 274 VVCRVDSIP----------PAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERK---SS 320
VV DS+P + WY +GR++ + + Q IFV + + S+
Sbjct: 239 VVFEGDSLPFQCMASYIDQDMQVLWYQDGRIVETDES----QGIFVEKSMIHNCSLIASA 294
Query: 321 LVLTNAQESDSGRFYCVAENRAG 343
L ++N Q +G + C + + G
Sbjct: 295 LTISNIQAGSTGNWGCHIQTKRG 317
>RGD|727812 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA;ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA;ISO;ISS;IDA] InterPro:IPR001611
PROSITE:PS51450 RGD:727812 GO:GO:0016021 GO:GO:0009897
InterPro:IPR003591 SMART:SM00369 GO:GO:0004872 GO:GO:0045121
GO:GO:0007166 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OrthoDB:EOG4FXR7G eggNOG:NOG254142
EMBL:AF532861 EMBL:AY311478 EMBL:BC129084 IPI:IPI00327090
IPI:IPI00734618 RefSeq:NP_852042.1 UniGene:Rn.22361
ProteinModelPortal:Q80WD0 Ensembl:ENSRNOT00000067414 GeneID:303311
KEGG:rno:303311 InParanoid:Q80WD0 NextBio:651118
ArrayExpress:Q80WD0 Genevestigator:Q80WD0
GermOnline:ENSRNOG00000003121 Uniprot:Q80WD0
Length = 445
Score = 204 (76.9 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 56/199 (28%), Positives = 93/199 (46%)
Query: 54 LDMSGNN-LQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N L+ L E F+ GL+ L L+L +C + + +G GL +L + L DN +
Sbjct: 105 LDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSSLPAGIFGGLHSLQYLYLQDNHIE 162
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + +G F+ + L +L + E++L+ + +AF
Sbjct: 163 YLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVNLDRLLLHENQLQWVHHKAFHDLHR 222
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L ++ L N L+ + PL+ L + L+ N W C C RS+ WL + C
Sbjct: 223 LTTLFLFNNSLTELQGDCLAPLVALEFLRLNGNAWDCGCRARSLWEWLRRFRGSSSVVPC 282
Query: 233 TGPERLSGKVFSDLHADDF 251
PE G+ L +DF
Sbjct: 283 ATPELRQGQDLKSLRVEDF 301
Score = 145 (56.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 65/270 (24%), Positives = 113/270 (41%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C+C + C+ IPE PE ++ + + N++ L + F A
Sbjct: 25 CPRDCVCY--PSPMTVSCQAHNFAAIPEGIPED--SERIFLQNNHITFLQQGHFSPA--- 77
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN--LLTSIPSLTFQSVRFLRDLNLARN 133
+ L++ +I I +G +L E+DL DN L T P TFQ + L L L +
Sbjct: 78 -MVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPE-TFQGLVKLHALYLYKC 135
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
+S + G F + L L + ++ +E++ + F +L + L+GN+L
Sbjct: 136 GLSSLPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRG 195
Query: 194 LLKLMMIELHDNP--WVC-----DCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDL 246
L+ L + LH+N WV D + R ++L + +Q C P L F L
Sbjct: 196 LVNLDRLLLHENQLQWVHHKAFHDLH-RLTTLFLFNNSLTELQGDCLAP--LVALEFLRL 252
Query: 247 HADDFACKPEIRMDSRYVEAVSSENATVVC 276
+ + + C R ++ ++ V C
Sbjct: 253 NGNAWDCGCRARSLWEWLRRFRGSSSVVPC 282
Score = 41 (19.5 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 406 QIEVMANGNAHAVVNKTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLP 458
++E N A ++ S T + TS RK+ P S + P+G LP
Sbjct: 297 RVEDFRNCTGPASPHQIKSHT--LSTSDRAARKEHHPSHGASRDKGHPHGHLP 347
>MGI|MGI:2442509 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2442509
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:139065 OrthoDB:EOG4VHK5S
EMBL:AB097573 EMBL:AK032263 EMBL:AK039763 EMBL:AK053065
IPI:IPI00396668 RefSeq:NP_848855.2 UniGene:Mm.101707
ProteinModelPortal:Q810B8 SMR:Q810B8 PhosphoSite:Q810B8
PaxDb:Q810B8 PRIDE:Q810B8 Ensembl:ENSMUST00000069926
Ensembl:ENSMUST00000114679 GeneID:245446 KEGG:mmu:245446
InParanoid:Q810B8 ChiTaRS:SLITRK4 NextBio:386707 Bgee:Q810B8
CleanEx:MM_SLITRK4 Genevestigator:Q810B8
GermOnline:ENSMUSG00000046699 Uniprot:Q810B8
Length = 837
Score = 207 (77.9 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 62/213 (29%), Positives = 101/213 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPE-APESELTQVLDMSGNNLQILPKEAFRRAG 73
CP C CK + C++K + ++ E P+ + L ++GNN++ + F
Sbjct: 342 CPVPCFCKTHPSDLGLSVNCQEKNIQSMSELTPKPLNAKKLHVNGNNIKDVDISDFTEFE 401
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I LTNL + L+ N + + F + L+ L L N
Sbjct: 402 GLDL--LHLGSNQITLIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYN 459
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I G F +P L L ++ + L+ + F+GA L + L N+ + PV V +
Sbjct: 460 LIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMYLPVSGVLD 518
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN 225
L L I+L NPW C C++ ++K+WL +K N
Sbjct: 519 QLQSLTQIDLEGNPWDCTCDLVALKLWL-EKLN 550
Score = 196 (74.1 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 56/200 (28%), Positives = 96/200 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+ N L IL F + L L + I+ GA GL+ L ++ L++N L
Sbjct: 64 LNFQNNFLNILYPNTF--VNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKI 121
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ + TF + L L N I IE+GAF + L L ++++ + + F A SL
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFA-SL 180
Query: 174 ESIKLNGNRLSHFPVRSV-EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQPA 231
+ + GNR+ P V E + +++ ++L DNPW C C++ +K WL + N+ + A
Sbjct: 181 THLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGEA 240
Query: 232 -CTGPERLSGKVFSDLHADD 250
C P L G++ + + +
Sbjct: 241 ICETPSDLYGRLLKETNKQE 260
Score = 57 (25.1 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 420 NKTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHSVIN----ISNPDLIN 475
NK L P+ S F R PPS +PNG TLH ++ +NP I+
Sbjct: 257 NKQ-ELCPMGTGSDFDVR--ILPPSQQENGFTTPNGHTTQTTLHRLVTKPPKTTNPSKIS 313
Query: 476 DTRKPEGLSPEPHNDDVLFQ 495
+ LS + V +Q
Sbjct: 314 GIVAGKALSNRNLSQIVSYQ 333
>UNIPROTKB|F1N5L8 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:DAAA02067886 IPI:IPI00731735 RefSeq:XP_002699658.1
RefSeq:XP_609417.2 Ensembl:ENSBTAT00000015639 GeneID:530936
KEGG:bta:530936 NextBio:20875355 Uniprot:F1N5L8
Length = 837
Score = 207 (77.9 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 61/213 (28%), Positives = 102/213 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C CK + C++K + ++ E P+ + L ++GN+++ + F
Sbjct: 342 CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPSNAKKLHVNGNSIKDVDISDFTEFE 401
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I LTNL + L+ N + + F + L+ L L N
Sbjct: 402 GLDL--LHLGSNQITAIKGDVFRNLTNLRRLYLNGNQIERLYPEMFSGLHNLQYLYLEYN 459
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I G F +P L L ++ + L+ + F+GA L + L N+ + PV V +
Sbjct: 460 LIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMYLPVSGVLD 518
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKN 225
L L I+L NPW C C++ ++K+WL +K N
Sbjct: 519 QLQALTQIDLEGNPWDCTCDLVALKLWL-EKLN 550
Score = 194 (73.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 57/201 (28%), Positives = 99/201 (49%)
Query: 54 LDMSGNNLQIL-PKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
L+ N L IL P + ++LQ L + I+ GA GL+ L ++ L++N L
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQ---LGNNKLQNIEGGAFLGLSALKQLHLNNNELK 120
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ + TF + L L N I IE+GAF + L L ++++ + + F A S
Sbjct: 121 ILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFA-S 179
Query: 173 LESIKLNGNRLSHFPVRSV-EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQP 230
L + + GNR+ P V E + +++ ++L DNPW C C++ +K WL + N+ +
Sbjct: 180 LTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGE 239
Query: 231 A-CTGPERLSGKVFSDLHADD 250
A C P L G++ + + +
Sbjct: 240 AICETPSDLYGRLLKETNKQE 260
Score = 49 (22.3 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 420 NKTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHSVIN----ISNPDLIN 475
NK L P+ S F R PPS +PNG +LH ++ +NP I+
Sbjct: 257 NKQ-ELCPMGTGSDFDVR--ILPPSQLENGYTTPNGHTTQTSLHRLVTKAPKTTNPSKIS 313
Query: 476 DTRKPEGLSPEPHNDDVLFQ 495
+ LS + V +Q
Sbjct: 314 GIVAGKALSNRNLSQIVSYQ 333
>UNIPROTKB|E2RGP5 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:22865 OMA:IAPYQTR
EMBL:AAEX03017345 RefSeq:XP_851171.1 Ensembl:ENSCAFT00000022943
GeneID:608925 KEGG:cfa:608925 NextBio:20894548 Uniprot:E2RGP5
Length = 979
Score = 213 (80.0 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 64/229 (27%), Positives = 103/229 (44%)
Query: 17 CPSTCICKWKGGKQWM--ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + C+++ I E P + L +S N +Q + + F
Sbjct: 373 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 432
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I + GA L NL + L+ N + + F+ ++ L L N
Sbjct: 433 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 490
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ AF +P L L ++ + L + +AF G SL + L N + PV V E
Sbjct: 491 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 549
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLS 239
L ++ I+L++NPW C C++ K W+ +V V C PE L+
Sbjct: 550 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLT 598
Score = 174 (66.3 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 59/207 (28%), Positives = 91/207 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
C C C+ K + C K I + E L + N+++ L +F L
Sbjct: 44 CFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKLYTNSFLH--LN 101
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
N + L + I SGA +GL L + L +N L + TF + L L N I
Sbjct: 102 NAVSINLGNNALQDIQSGAFNGLKILKRLYLHENKLDIFRNDTFLGLESLEYLQADYNVI 161
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+IE GAF+ + L L ++++ + + F A SL + L GNRL R + +
Sbjct: 162 KRIESGAFRNLSKLRVLILNDNLIPMLPTNLFK-AVSLTHLDLRGNRLKVLFYRGMLDHI 220
Query: 196 --KLMMIELHDNPWVCDCNMRSIKMWL 220
LM ++L +NPW C C + +K WL
Sbjct: 221 GRSLMELQLEENPWNCTCEIVQLKSWL 247
Score = 43 (20.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 536 PPDYGLPIVGQGQNELLPNNIHPNAKTL 563
PP G ++G Q P H N +TL
Sbjct: 784 PPGIGEVLLGSEQFAETPKENHSNYRTL 811
>UNIPROTKB|F1N513 [details] [associations]
symbol:LOC527364 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:IAPYQTR EMBL:DAAA02002302
IPI:IPI00907843 RefSeq:XP_003585735.1 RefSeq:XP_003585736.1
Ensembl:ENSBTAT00000022827 GeneID:527364 KEGG:bta:527364
Uniprot:F1N513
Length = 980
Score = 213 (80.0 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 64/229 (27%), Positives = 103/229 (44%)
Query: 17 CPSTCICKWKGGKQWM--ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + C+++ I E P + L +S N +Q + + F
Sbjct: 374 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 433
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I + GA L NL + L+ N + + F+ ++ L L N
Sbjct: 434 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 491
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ AF +P L L ++ + L + +AF G SL + L N + PV V E
Sbjct: 492 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 550
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLS 239
L ++ I+L++NPW C C++ K W+ +V V C PE L+
Sbjct: 551 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLT 599
Score = 171 (65.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
C C C+ K + C K I + E L + N+++ L +F L
Sbjct: 45 CFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKLYTNSFLH--LN 102
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
N + L + I +GA +GL L + L +N L + TF + L L N I
Sbjct: 103 NAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDIFRNDTFLGLESLEYLQADYNVI 162
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+IE GAF+ + L L ++++ + + F A SL + L GNRL R + +
Sbjct: 163 KRIESGAFRNLSKLRVLILNDNLIPMLPTNLFK-AVSLTHLDLRGNRLKVLFYRGMLDHI 221
Query: 196 --KLMMIELHDNPWVCDCNMRSIKMWL 220
LM ++L +NPW C C + +K WL
Sbjct: 222 GRSLMELQLEENPWNCTCEIVQLKSWL 248
Score = 43 (20.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 536 PPDYGLPIVGQGQNELLPNNIHPNAKTL 563
PP G ++G Q P H N +TL
Sbjct: 785 PPGMGEVLLGSEQFAETPKENHSNYRTL 812
>MGI|MGI:2442512 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:2442512 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH466593 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414 KO:K16356
OMA:WAVGEEE eggNOG:NOG239228 EMBL:DQ078787 EMBL:AK040916
EMBL:BC066999 EMBL:BC094593 IPI:IPI00222949 RefSeq:NP_780687.1
UniGene:Mm.23157 ProteinModelPortal:Q8BLY3 SMR:Q8BLY3 STRING:Q8BLY3
PhosphoSite:Q8BLY3 PaxDb:Q8BLY3 PRIDE:Q8BLY3
Ensembl:ENSMUST00000046351 GeneID:233067 KEGG:mmu:233067
UCSC:uc009gee.1 InParanoid:Q505E2 OrthoDB:EOG43TZV6 NextBio:381527
Bgee:Q8BLY3 Genevestigator:Q8BLY3 GermOnline:ENSMUSG00000036957
Uniprot:Q8BLY3
Length = 626
Score = 205 (77.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 89/334 (26%), Positives = 140/334 (41%)
Query: 36 DKFLITIPEAPESELTQVL--DMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + + +T +L +S N ++ + AF A L L+ L L + + G
Sbjct: 68 DNFIAAVRRRDLANMTGLLHLSLSRNTIRHVAAGAF--ADLRALRALHLDGNRLTSLGEG 125
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
L GL NL + LS+N L ++ + L DL+L+ N + ++ A + + L
Sbjct: 126 QLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTL 185
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP---VRSVEPLL--------KLMMIE 201
+ + L + AF+ L + + NRL+ P + S PLL +++
Sbjct: 186 GLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLA 245
Query: 202 LHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMDS 261
NP C+C + +WL AC P L G+ F + ++F C+P +
Sbjct: 246 FGGNPLHCNCEL----VWLRRLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHR 301
Query: 262 RYVEAV-SSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKS 319
AV + A + CR P + W GRLL N SS R F G E
Sbjct: 302 SPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGN----SSRARAF--PNGTLE--- 352
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L++T + D G F C+A N AG A A L V
Sbjct: 353 -LLVTEPE--DGGTFTCIAANAAGEATAAVELTV 383
Score = 132 (51.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQ-ILPKEAFRRAGLL 75
CP C C+ + + C L+ +P + + + L ++ N + + ++ GLL
Sbjct: 28 CPRRCRCQTQSMPLSVLCPGAGLLFVPPSLDRRAAE-LRLADNFIAAVRRRDLANMTGLL 86
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L L+R I + +GA L L + L N LTS+ + + LR L L+ N +
Sbjct: 87 HLS---LSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQL 143
Query: 136 SKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+ + GA L LD+S + LE + EA ++ ++ L+ N L+ P + L
Sbjct: 144 AALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRL 203
Query: 195 LKLMMIELHDN 205
KL +++ N
Sbjct: 204 HKLARLDMTSN 214
>RGD|1305567 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1305567 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH473979 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414
eggNOG:NOG323197 KO:K16356 OMA:WAVGEEE OrthoDB:EOG43TZV6
EMBL:BC158862 IPI:IPI00367086 RefSeq:NP_001100972.1
UniGene:Rn.50030 ProteinModelPortal:B0BNK7
Ensembl:ENSRNOT00000028275 GeneID:308495 KEGG:rno:308495
UCSC:RGD:1305567 NextBio:659014 Genevestigator:B0BNK7
Uniprot:B0BNK7
Length = 626
Score = 205 (77.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 89/334 (26%), Positives = 140/334 (41%)
Query: 36 DKFLITIPEAPESELTQVL--DMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + + +T +L +S N ++ + AF A L L+ L L + + G
Sbjct: 68 DNFIAAVRRRDLANMTGLLHLSLSRNTIRHVAAGAF--ADLRALRALHLDGNRLTSLGEG 125
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
L GL NL + LS+N L ++ + L DL+L+ N + ++ A + + L
Sbjct: 126 QLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTL 185
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP---VRSVEPLL--------KLMMIE 201
+ + L + AF+ L + + NRL+ P + S PLL +++
Sbjct: 186 GLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLA 245
Query: 202 LHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMDS 261
NP C+C + +WL AC P L G+ F + ++F C+P +
Sbjct: 246 FGGNPLHCNCEL----VWLRRLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHR 301
Query: 262 RYVEAV-SSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKS 319
AV + A + CR P + W GRLL N SS R F G E
Sbjct: 302 SPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGN----SSRARAF--PNGTLE--- 352
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L++T + D G F C+A N AG A A L V
Sbjct: 353 -LLVTEPE--DGGTFTCIAANAAGEATAAVELTV 383
Score = 131 (51.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQ-ILPKEAFRRAGLL 75
CP C C+ + + C L+ +P + + + L ++ N + + ++ GLL
Sbjct: 28 CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAE-LRLADNFIAAVRRRDLANMTGLL 86
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L L+R I + +GA L L + L N LTS+ + + LR L L+ N +
Sbjct: 87 HLS---LSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQL 143
Query: 136 SKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+ + GA L LD+S + LE + EA ++ ++ L+ N L+ P + L
Sbjct: 144 AALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRL 203
Query: 195 LKLMMIELHDN 205
KL +++ N
Sbjct: 204 HKLARLDMTSN 214
>UNIPROTKB|Q1RMS4 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9913 "Bos taurus" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 GO:GO:0030425 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352
GeneTree:ENSGT00660000095307 EMBL:BC114740 IPI:IPI00689182
RefSeq:NP_001070427.1 UniGene:Bt.55363 ProteinModelPortal:Q1RMS4
Ensembl:ENSBTAT00000000176 GeneID:767839 KEGG:bta:767839 CTD:79414
eggNOG:NOG323197 InParanoid:Q1RMS4 KO:K16356 OMA:WAVGEEE
OrthoDB:EOG4H465G NextBio:20918207 Uniprot:Q1RMS4
Length = 628
Score = 205 (77.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 89/334 (26%), Positives = 141/334 (42%)
Query: 36 DKFLITIPEAPESELTQVL--DMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ T+ + +T +L +S N ++ + AF + L L+ L L + + G
Sbjct: 68 DNFIATVRRRDLANMTGLLHLSLSRNTIRHVAAGAF--SDLRALRALHLDGNRLTSLGEG 125
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
L GL NL + LS+N L ++ + L DL+L+ N + ++ A + + L
Sbjct: 126 QLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTL 185
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP---VRSVEPLL--------KLMMIE 201
+ + L + AF+ L + + NRL+ P + S PLL +++
Sbjct: 186 GLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLA 245
Query: 202 LHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMDS 261
NP C+C + +WL AC P L G+ F + ++F C+P +
Sbjct: 246 FGGNPLHCNCEL----VWLRRLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHR 301
Query: 262 RYVEAV-SSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKS 319
AV + A + CR P + W GRLL N SS R F G E
Sbjct: 302 SPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGN----SSRARAF--PNGTLE--- 352
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L++T + D G F C+A N AG A A L V
Sbjct: 353 -LLVT--EPGDGGIFTCIAANAAGEATAAVELTV 383
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQ-ILPKEAFRRAGLL 75
CP C C+ + + C L+ +P + + + L ++ N + + ++ GLL
Sbjct: 28 CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAE-LRLADNFIATVRRRDLANMTGLL 86
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L L+R I + +GA L L + L N LTS+ + + LR L L+ N +
Sbjct: 87 HLS---LSRNTIRHVAAGAFSDLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQL 143
Query: 136 SKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+ + GA L LD+S + LE + EA ++ ++ L+ N L+ P + L
Sbjct: 144 AALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRL 203
Query: 195 LKLMMIELHDN 205
KL +++ N
Sbjct: 204 HKLARLDMTSN 214
>RGD|1566005 [details] [associations]
symbol:Flrt3 "fibronectin leucine rich transmembrane protein 3"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1566005 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 EMBL:CH473949 HOGENOM:HOG000290188 HOVERGEN:HBG051629
KO:K16362 CTD:23767 OMA:SPYRVCM OrthoDB:EOG4NCMCB EMBL:BC160843
IPI:IPI00368800 RefSeq:NP_001119763.1 UniGene:Rn.220263
ProteinModelPortal:B1H234 STRING:B1H234 PRIDE:B1H234
Ensembl:ENSRNOT00000006454 GeneID:366205 KEGG:rno:366205
UCSC:RGD:1566005 GeneTree:ENSGT00700000104442 NextBio:688953
Genevestigator:B1H234 Uniprot:B1H234
Length = 649
Score = 213 (80.0 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 63/215 (29%), Positives = 106/215 (49%)
Query: 47 ESELTQVLDMSGNNLQILPKEAFRRAGL-LNLQKLFLARCHIGQIDSGALDGLTNLIEID 105
+S ++L +S N+L +P GL +++L L I I S +L GLT+L +
Sbjct: 152 DSNYLRLLFLSRNHLSTIP------GGLPRTIEELRLDDNRISTISSPSLHGLTSLKRLV 205
Query: 106 LSDNLLTS--IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG--LVKLDMSESRLEH 161
L NLL + + F ++ L +L+L RN ++ +PG L KL + ++ +
Sbjct: 206 LDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVN----LPGTSLRKLYLQDNHINR 261
Query: 162 ISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLA 221
+ P AF+ + L + ++ N LS+ P + L + + L +NPW C C M+ ++ WL
Sbjct: 262 VPPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDLDNITQLILRNNPWYCGCKMKWVRDWLQ 321
Query: 222 DKK-NVPVQPA-CTGPERLSGKVFSDLHADDFACK 254
V V+ C PE++ G DL A+ F CK
Sbjct: 322 SLPVKVNVRGLMCQAPEKVRGMAIKDLSAELFDCK 356
Score = 133 (51.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSG-NNLQILPKEAFRRAGL 74
CPS C C G ++ C D+ L +IP PE T L + NN+ I P + L
Sbjct: 31 CPSVCRCD--AG--FIYCNDRSLTSIPVGIPEDATTLYLQNNQINNVGI-PSDL---KNL 82
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLI-EIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L +Q+++L + + + L + E+ L +N + +I + + +L +L+L N
Sbjct: 83 LKVQRIYLYHNSLDEFPTN----LPKYVKELHLQENNIRTITYDSLSKIPYLEELHLDDN 138
Query: 134 PIS--KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV 191
+S IE+GAF+ L L +S + L I P +++E ++L+ NR+S S+
Sbjct: 139 SVSAVSIEEGAFRDSNYLRLLFLSRNHLSTI-PGGLP--RTIEELRLDDNRISTISSPSL 195
Query: 192 EPLLKLMMIELHDN 205
L L + L N
Sbjct: 196 HGLTSLKRLVLDGN 209
Score = 37 (18.1 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 13/62 (20%), Positives = 25/62 (40%)
Query: 422 TPSLTPVIETSSFTERKQFPPPSYHSTEMISPN--------GQLPNKTLHSVINISNPDL 473
T +T I +++ + Q+P P ++ +P G KT+ + PD
Sbjct: 363 TVQITTAIPNTAYPAQGQWPAPVTKQPDIKNPKLTKDQRTTGSPSRKTILITVKSVTPDT 422
Query: 474 IN 475
I+
Sbjct: 423 IH 424
>UNIPROTKB|I3LFJ7 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:CU582950
Ensembl:ENSSSCT00000023085 Uniprot:I3LFJ7
Length = 477
Score = 202 (76.2 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 59/214 (27%), Positives = 95/214 (44%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
GL L+ L L + + GA +L + L+DNLL ++P+ F +R LR LNL
Sbjct: 200 GLRRLRSLSLQANRVRTVHGGAFRDCGSLEHLLLNDNLLAALPADAFHGLRHLRTLNLGG 259
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N + ++ + F + L L + + + + AF L ++ LNGN L+ + +
Sbjct: 260 NALGRVARAWFAELAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNHLTMLAWAAFQ 319
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDL---HAD 249
P L + L NPW CDC + ++ W+ P C P ++G + H+
Sbjct: 320 PGFFLGHLFLFRNPWRCDCRLEWLRDWMESFGRAADVP-CASPGSVAGLDLRQVAFGHSS 378
Query: 250 DFAC-KPEIRMDSRYVEAVSSENA-TVVCRVDSI 281
D C PE + + S E A T V R S+
Sbjct: 379 DGLCVDPEELNLTAPIPGPSPEPAATTVSRFSSL 412
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 49/190 (25%), Positives = 84/190 (44%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C+C + C L+ +P E + D+ N L+ L + AF L +
Sbjct: 27 CPAACVCSSVERGCSVRCDRAGLLRVPAEFPCEAASI-DLDRNGLRFLGERAF--GTLPS 83
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNPI 135
L++L L ++ I GA GL L E+ L+ N L + + TF ++ LR L+LA +
Sbjct: 84 LRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYLHARTFAALGRLRRLDLAACRL 143
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + +P L +L ++ + P A G +L L +R+ S+ L
Sbjct: 144 FSVPERLLAELPALRELAAFDNLFRRV-PGALRGLANLTHAHLERSRIEAVASSSLLGLR 202
Query: 196 KLMMIELHDN 205
+L + L N
Sbjct: 203 RLRSLSLQAN 212
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 33/113 (29%), Positives = 55/113 (48%)
Query: 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
GAL GL NL L + + ++ S + +R LR L+L N + + GAF+ L L
Sbjct: 172 GALRGLANLTHAHLERSRIEAVASSSLLGLRRLRSLSLQANRVRTVHGGAFRDCGSLEHL 231
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
++++ L + +AF G + L ++ L GN L L +L ++ L N
Sbjct: 232 LLNDNLLAALPADAFHGLRHLRTLNLGGNALGRVARAWFAELAELELLYLDRN 284
>UNIPROTKB|Q9BTN0 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0030425
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352 CTD:79414
KO:K16356 OMA:WAVGEEE OrthoDB:EOG4H465G EMBL:AK172754 EMBL:AY358127
EMBL:BC003578 IPI:IPI00001577 RefSeq:NP_078785.1 UniGene:Hs.143792
ProteinModelPortal:Q9BTN0 SMR:Q9BTN0 STRING:Q9BTN0
PhosphoSite:Q9BTN0 DMDM:62286945 PRIDE:Q9BTN0 DNASU:79414
Ensembl:ENST00000246529 GeneID:79414 KEGG:hsa:79414 UCSC:uc002oco.3
GeneCards:GC19P036427 HGNC:HGNC:28370 HPA:HPA048923 MIM:612809
neXtProt:NX_Q9BTN0 PharmGKB:PA134880779 eggNOG:NOG239228
InParanoid:Q9BTN0 PhylomeDB:Q9BTN0 ChiTaRS:LRFN3 GenomeRNAi:79414
NextBio:68379 Bgee:Q9BTN0 CleanEx:HS_LRFN3 Genevestigator:Q9BTN0
GermOnline:ENSG00000126243 Uniprot:Q9BTN0
Length = 628
Score = 204 (76.9 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 89/334 (26%), Positives = 141/334 (42%)
Query: 36 DKFLITIPEAPESELTQVL--DMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ ++ + +T +L +S N ++ + AF A L L+ L L + + G
Sbjct: 68 DNFIASVRRRDLANMTGLLHLSLSRNTIRHVAAGAF--ADLRALRALHLDGNRLTSLGEG 125
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
L GL NL + LS+N L ++ + L DL+L+ N + ++ A + + L
Sbjct: 126 QLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTL 185
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP---VRSVEPLL--------KLMMIE 201
+ + L + AF+ L + + NRL+ P + S PLL +++
Sbjct: 186 GLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLA 245
Query: 202 LHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEIRMDS 261
NP C+C + +WL AC P L G+ F + ++F C+P +
Sbjct: 246 FGGNPLHCNCEL----VWLRRLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHR 301
Query: 262 RYVEAV-SSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKS 319
AV + A + CR P + W GRLL N SS R F G E
Sbjct: 302 SPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGN----SSRARAF--PNGTLE--- 352
Query: 320 SLVLTNAQESDSGRFYCVAENRAGIADANFTLQV 353
L++T + D G F C+A N AG A A L V
Sbjct: 353 -LLVT--EPGDGGIFTCIAANAAGEATAAVELTV 383
Score = 132 (51.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNL-QILPKEAFRRAGLL 75
CP C C+ + + C L+ +P + + + L ++ N + + ++ GLL
Sbjct: 28 CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAE-LRLADNFIASVRRRDLANMTGLL 86
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
+L L+R I + +GA L L + L N LTS+ + + LR L L+ N +
Sbjct: 87 HLS---LSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQL 143
Query: 136 SKIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
+ + GA L LD+S + LE + EA ++ ++ L+ N L+ P + L
Sbjct: 144 AALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRL 203
Query: 195 LKLMMIELHDN 205
KL +++ N
Sbjct: 204 HKLARLDMTSN 214
>MGI|MGI:2385612 [details] [associations]
symbol:Lrfn4 "leucine rich repeat and fibronectin type III
domain containing 4" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:2385612 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:78999 KO:K16357
OMA:PHGGNGS OrthoDB:EOG4GTKCM EMBL:DQ078786 EMBL:AK081560
EMBL:AK163603 EMBL:BC023036 EMBL:BC023156 IPI:IPI00330802
RefSeq:NP_700437.2 UniGene:Mm.329675 ProteinModelPortal:Q80XU8
SMR:Q80XU8 STRING:Q80XU8 PhosphoSite:Q80XU8 PaxDb:Q80XU8
PRIDE:Q80XU8 Ensembl:ENSMUST00000053597 Ensembl:ENSMUST00000113822
GeneID:225875 KEGG:mmu:225875 UCSC:uc008gah.2 InParanoid:Q460G5
NextBio:377837 Bgee:Q80XU8 Genevestigator:Q80XU8
GermOnline:ENSMUSG00000045045 Uniprot:Q80XU8
Length = 636
Score = 204 (76.9 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 78/329 (23%), Positives = 140/329 (42%)
Query: 36 DKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + +T ++D+ S N + + +F L +L+ L L + ++ S
Sbjct: 57 DNFIQALGPPDFRNMTGLVDLTLSRNAITRIGARSF--GDLESLRSLHLDGNRLVELGSS 114
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
+L G NL + LS N L I F + L DL+++ N + ++ +P L L
Sbjct: 115 SLRGPVNLQHLILSGNQLGRIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTL 174
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF---PV----RSVEPLLKLMMIELHDN 205
++ + ++ + P F L + L NRL+ P+ R E +++ N
Sbjct: 175 NLDHNLIDALPPGVFAQLSQLSRLDLTSNRLATLAPDPLFSRGRDAEASPSPLVLSFSGN 234
Query: 206 PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDSRYV 264
P C+C + +WL C P L+G+ F + +F+C+P I ++ +
Sbjct: 235 PLHCNCEL----LWLRRLARPDDLETCASPPTLAGRYFWAVPEGEFSCEPPLIARHTQRL 290
Query: 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ + AT+ CR P + W L+ N++ R + G E + +T
Sbjct: 291 WVLEGQRATLRCRALGDPVPTMHWVGPDDRLVGNSS-----RAWAFPNGTLE----IGVT 341
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQV 353
A D+G + C+A N AG A A L+V
Sbjct: 342 GA--GDAGAYTCIATNPAGEATARVELRV 368
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 50/191 (26%), Positives = 87/191 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C+ C + L+ +P + + L ++ N +Q L FR +
Sbjct: 17 CPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVE-LRLADNFIQALGPPDFRN--MTG 73
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R I +I + + L +L + L N L + S + + L+ L L+ N +
Sbjct: 74 LVDLTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPVNLQHLILSGNQLG 133
Query: 137 KIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK-SLESIKLNGNRLSHFPVRSVEPL 194
+I GAF F+ L LD+S + L + P A G+ +L ++ L+ N + P L
Sbjct: 134 RIAPGAFDDFLDSLEDLDVSYNNLRQV-PWAGIGSMPALHTLNLDHNLIDALPPGVFAQL 192
Query: 195 LKLMMIELHDN 205
+L ++L N
Sbjct: 193 SQLSRLDLTSN 203
>RGD|1585286 [details] [associations]
symbol:Lrfn4 "leucine rich repeat and fibronectin type III
domain containing 4" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1585286 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473953
GeneTree:ENSGT00660000095307 CTD:78999 KO:K16357 OMA:PHGGNGS
OrthoDB:EOG4GTKCM IPI:IPI00195375 RefSeq:NP_001102978.1
UniGene:Rn.198548 ProteinModelPortal:D4ABX8
Ensembl:ENSRNOT00000026169 GeneID:688721 KEGG:rno:688721
UCSC:RGD:1585286 NextBio:737115 Uniprot:D4ABX8
Length = 636
Score = 204 (76.9 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 78/329 (23%), Positives = 140/329 (42%)
Query: 36 DKFLITIPEAPESELTQVLDM--SGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + +T ++D+ S N + + +F L +L+ L L + ++ S
Sbjct: 57 DNFIQALGPPDFRNMTGLVDLTLSRNAITRIGARSF--GDLESLRSLHLDGNRLVELGSS 114
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
+L G NL + LS N L I F + L DL+++ N + ++ +P L L
Sbjct: 115 SLRGPVNLQHLILSGNQLGRIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTL 174
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHF---PV----RSVEPLLKLMMIELHDN 205
++ + ++ + P F L + L NRL+ P+ R E +++ N
Sbjct: 175 NLDHNLIDALPPGVFAQLSQLSRLDLTSNRLATLAPDPLFSRGRDAEASPSPLVLSFSGN 234
Query: 206 PWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPE-IRMDSRYV 264
P C+C + +WL C P L+G+ F + +F+C+P I ++ +
Sbjct: 235 PLHCNCEL----LWLRRLARPDDLETCASPPTLAGRYFWAVPEGEFSCEPPLIARHTQRL 290
Query: 265 EAVSSENATVVCRVDSIPPAAISWYWNGRLLLNNTAFSSYQRIFVIEQGEYERKSSLVLT 324
+ + AT+ CR P + W L+ N++ R + G E + +T
Sbjct: 291 WVLEGQRATLRCRALGDPVPTMHWVGPDDRLVGNSS-----RAWAFPNGTLE----IGVT 341
Query: 325 NAQESDSGRFYCVAENRAGIADANFTLQV 353
A D+G + C+A N AG A A L+V
Sbjct: 342 GA--GDAGAYTCIATNPAGEATARVELRV 368
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 50/191 (26%), Positives = 87/191 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP C+C+ C + L+ +P + + L ++ N +Q L FR +
Sbjct: 17 CPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVE-LRLADNFIQALGPPDFRN--MTG 73
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R I +I + + L +L + L N L + S + + L+ L L+ N +
Sbjct: 74 LVDLTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPVNLQHLILSGNQLG 133
Query: 137 KIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAK-SLESIKLNGNRLSHFPVRSVEPL 194
+I GAF F+ L LD+S + L + P A G+ +L ++ L+ N + P L
Sbjct: 134 RIAPGAFDDFLDSLEDLDVSYNNLRQV-PWAGIGSMPALHTLNLDHNLIDALPPGVFAQL 192
Query: 195 LKLMMIELHDN 205
+L ++L N
Sbjct: 193 SQLSRLDLTSN 203
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 208 (78.3 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 64/228 (28%), Positives = 106/228 (46%)
Query: 40 ITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
I+ P A ++D G L +P A G++ ++ L + I I +GA
Sbjct: 92 ISCPSACTCS-NNIVDCRGKGLTEIP--ANLPEGIVEIR---LEQNSIKSIPAGAFTQYK 145
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L ID+S N ++ I FQ ++ L L L N I++I KG F + L L ++ +++
Sbjct: 146 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 205
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ F +SL + L N+L PL + + L NP+VCDC++R W
Sbjct: 206 NCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLR----W 261
Query: 220 LADK-KNVPVQPA---CTGPERLSGKVFSDLHADDFACKPEIRMDSRY 263
LAD ++ P++ + C+ P RL+ K S + + F C SR+
Sbjct: 262 LADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRF 309
Score = 175 (66.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 43/162 (26%), Positives = 74/162 (45%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L NL +I+LS+N + + F +++L L N + AF+ + GL
Sbjct: 364 TGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKT 423
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + + + +S + F G S+ + L NR++ + L+ L I L NP+ C+C
Sbjct: 424 LMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNC 483
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFAC 253
++ + WL ++ V P C P L D+ DF C
Sbjct: 484 HLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 525
Score = 160 (61.4 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 66/248 (26%), Positives = 112/248 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C ++CR K L IP PE + ++ + N+++ +P AF +
Sbjct: 94 CPSACTCS----NNIVDCRGKGLTEIPANLPEG-IVEIR-LEQNSIKSIPAGAFTQ--YK 145
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+++ +++ I I A GL +L + L N +T IP F + L+ L L N I
Sbjct: 146 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 205
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + FQ + L L + +++L+ IS F ++++++ L N P + L
Sbjct: 206 NCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN-----PF-VCDCHL 259
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPE----RLSGKVFSDLHA 248
+ + L DNP S LA+K+ ++ C+G E R S + F DL
Sbjct: 260 RWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVC 319
Query: 249 DDFACKPE 256
D C+ E
Sbjct: 320 PD-RCRCE 326
Score = 156 (60.0 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 48/166 (28%), Positives = 82/166 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEA-FRRAGLL 75
CP C C+ G ++C ++ L IP +T L ++ N + +L F++ L
Sbjct: 319 CPDRCRCE---GTI-VDCSNQKLARIPSHLPEYVTD-LRLNDNEISVLEATGIFKK--LP 371
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+K+ L+ I ++ GA DG ++ E+ L+ N L + F+ + L+ L L N I
Sbjct: 372 NLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLI 431
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
S + F + + L + ++R+ I+P AFT SL +I L N
Sbjct: 432 SCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 477
Score = 136 (52.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 41/138 (29%), Positives = 69/138 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKE--AFRRAGL 74
CP C C + + C ++ L +P+ ++T+ L + GN+L +PKE +FR L
Sbjct: 539 CPEQCTCV----ETVVRCSNRGLRALPKGIPKDVTE-LYLEGNHLTAVPKELSSFRHLTL 593
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
++L + IG + + +++L + LS N L IP +F +R LR L L N
Sbjct: 594 IDL-----SNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGND 648
Query: 135 ISKIEKGAFQFVPGLVKL 152
IS + +G+F + L L
Sbjct: 649 ISSVPEGSFNDLTSLSHL 666
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 206 (77.6 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 53/154 (34%), Positives = 79/154 (51%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+VL + N L+ +P EA R GL LQ L L HI + + +GL L + L DN L
Sbjct: 84 KVLTLQNNQLKTVPSEAIR--GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 141
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T +P ++ L+ L LA N IS I AF + LV L + +++ +S F G
Sbjct: 142 TEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLD 201
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+LE++ LN N L FP ++++ L L + H N
Sbjct: 202 NLETLDLNYNNLGEFP-QAIKALPSLKELGFHSN 234
Score = 182 (69.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 53/189 (28%), Positives = 93/189 (49%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
C + C C G + ++C K L +PE S TQ L ++GN+L + +A +GL
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGL-SAFTQALQLAGNDLSFIHPKAL--SGLKE 82
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L+ L L + + S A+ GL+ L + L N +TS+P +F+ + LR L L N ++
Sbjct: 83 LKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLT 142
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
++ +P L L ++ +++ I AFT SL + L+ N++ + L
Sbjct: 143 EVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDN 202
Query: 197 LMMIELHDN 205
L ++L+ N
Sbjct: 203 LETLDLNYN 211
Score = 150 (57.9 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 48/172 (27%), Positives = 85/172 (49%)
Query: 39 LITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L T+P L+ Q L + N++ +P+++F GL+ L+ L+L + ++ L
Sbjct: 93 LKTVPSEAIRGLSALQSLRLDANHITSVPEDSFE--GLVQLRHLWLDDNSLTEVPVHPLS 150
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L L + L+ N ++SIP F ++ L L+L N I + + F + L LD++
Sbjct: 151 NLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNY 210
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE--PLLKLMMIELHDNP 206
+ L P+A SL+ + + N +S P + + PLL+ I L+DNP
Sbjct: 211 NNLGEF-PQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRT--IHLYDNP 259
Score = 141 (54.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 47/160 (29%), Positives = 72/160 (45%)
Query: 31 WMECRDKFLITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIG 88
W++ D L +P P S L Q L ++ N + +P AF L +L L L I
Sbjct: 135 WLD--DNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAF--TNLSSLVVLHLHNNKIR 190
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
+ DGL NL +DL+ N L P +++ L++L N IS I GAF P
Sbjct: 191 SLSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDGNPL 249
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNG-NRLSHFP 187
L + + ++ L + AF L S+ + G + + FP
Sbjct: 250 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFP 289
Score = 134 (52.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
G ++L+ L L I I + L +DLS N + +PS F L +++L R
Sbjct: 293 GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQR 350
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N I +I++G FQ + L LD+S + + I AF + ++ ++ N L+ FP +
Sbjct: 351 NQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLN 410
Query: 193 PLLKLMMI 200
L +L ++
Sbjct: 411 GLNQLKLV 418
Score = 134 (52.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 46/167 (27%), Positives = 77/167 (46%)
Query: 41 TIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGL 98
+IP+ + L+ VL + N ++ L + F GL NL+ L L ++G+ A+ L
Sbjct: 167 SIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFD--GLDNLETLDLNYNNLGEFPQ-AIKAL 223
Query: 99 TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESR 158
+L E+ N ++ IP F LR ++L NP+S + AF + L L + +
Sbjct: 224 PSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGAS 283
Query: 159 LEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ P TG LES+ L G ++S P + L ++L N
Sbjct: 284 MVQQFPN-LTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYN 329
Score = 48 (22.0 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 506 PTNSELGFDSNDKTPIIDGVSIGGEL 531
P+ ELGF SN + I DG G L
Sbjct: 224 PSLKELGFHSNSISVIPDGAFDGNPL 249
>MGI|MGI:2442845 [details] [associations]
symbol:Lrrc38 "leucine rich repeat containing 38"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2442845 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR000483 SMART:SM00082 GO:GO:0005216 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:126755 HOGENOM:HOG000113369
HOVERGEN:HBG094920 OMA:LDEIQCS OrthoDB:EOG4GMTXN EMBL:AL611982
EMBL:BC129963 EMBL:AK045936 EMBL:AK160116 IPI:IPI00938501
RefSeq:NP_001156455.1 UniGene:Mm.94020 ProteinModelPortal:A2VDH3
SMR:A2VDH3 PRIDE:A2VDH3 Ensembl:ENSMUST00000052458 GeneID:242735
KEGG:mmu:242735 UCSC:uc008vqb.2 GeneTree:ENSGT00700000104451
InParanoid:A2VDH3 NextBio:385532 Bgee:A2VDH3 CleanEx:MM_LRRC38
Genevestigator:A2VDH3 Uniprot:A2VDH3
Length = 298
Score = 194 (73.4 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 45/148 (30%), Positives = 78/148 (52%)
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L+++KL +A I QI +L+ +D +N L S+ TF L L+L+ N
Sbjct: 60 LDVRKLLVAGNRIQQIPEDFFIFHGDLVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNN 119
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
++++ GAF+ LVKL ++ + L + AF +SL+ ++LN N L V +++ L
Sbjct: 120 LTQLGAGAFRSAGRLVKLSLANNHLAGVHEAAFESLESLQVLELNDNNLRSLNVAALDAL 179
Query: 195 LKLMMIELHDNPWVCDCNMRSIKMWLAD 222
L + L NPW+CDC+ + W+ +
Sbjct: 180 PALRTVRLDGNPWLCDCDFAHLFSWIQE 207
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 44/165 (26%), Positives = 88/165 (53%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C ++CRD+ L ++P+ ++ ++L ++GN +Q +P++ F G +
Sbjct: 32 CPAGCACT---DPHTVDCRDRGLPSVPDPFPLDVRKLL-VAGNRIQQIPEDFFIFHG--D 85
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L + ++ G G L +DLS N LT + + F+S L L+LA N ++
Sbjct: 86 LVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNHLA 145
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
+ + AF+ + L L+++++ L ++ A +L +++L+GN
Sbjct: 146 GVHEAAFESLESLQVLELNDNNLRSLNVAALDALPALRTVRLDGN 190
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 206 (77.6 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 53/154 (34%), Positives = 79/154 (51%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+VL + N L+ +P EA R GL LQ L L HI + + +GL L + L DN L
Sbjct: 108 KVLTLQNNQLKTVPSEAIR--GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 165
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T +P ++ L+ L LA N IS I AF + LV L + +++ +S F G
Sbjct: 166 TEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLD 225
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+LE++ LN N L FP ++++ L L + H N
Sbjct: 226 NLETLDLNYNNLGEFP-QAIKALPSLKELGFHSN 258
Score = 202 (76.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 55/189 (29%), Positives = 97/189 (51%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
C + C C G + ++C K L +PE S TQ LD+S NN+ LP++AF+ L
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGL-SAFTQALDISMNNITQLPEDAFKNFPFL- 83
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
++L LA + I AL GL L + L +N L ++PS + + L+ L L N I+
Sbjct: 84 -EELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLK 196
+ + +F+ + L L + ++ L + + +L+++ L N++S P + L
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSS 202
Query: 197 LMMIELHDN 205
L+++ LH+N
Sbjct: 203 LVVLHLHNN 211
Score = 150 (57.9 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 48/172 (27%), Positives = 85/172 (49%)
Query: 39 LITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L T+P L+ Q L + N++ +P+++F GL+ L+ L+L + ++ L
Sbjct: 117 LKTVPSEAIRGLSALQSLRLDANHITSVPEDSFE--GLVQLRHLWLDDNSLTEVPVHPLS 174
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L L + L+ N ++SIP F ++ L L+L N I + + F + L LD++
Sbjct: 175 NLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNY 234
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE--PLLKLMMIELHDNP 206
+ L P+A SL+ + + N +S P + + PLL+ I L+DNP
Sbjct: 235 NNLGEF-PQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRT--IHLYDNP 283
Score = 141 (54.7 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 47/160 (29%), Positives = 72/160 (45%)
Query: 31 WMECRDKFLITIPEAPESELT--QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIG 88
W++ D L +P P S L Q L ++ N + +P AF L +L L L I
Sbjct: 159 WLD--DNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAF--TNLSSLVVLHLHNNKIR 214
Query: 89 QIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPG 148
+ DGL NL +DL+ N L P +++ L++L N IS I GAF P
Sbjct: 215 SLSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDGNPL 273
Query: 149 LVKLDMSESRLEHISPEAFTGAKSLESIKLNG-NRLSHFP 187
L + + ++ L + AF L S+ + G + + FP
Sbjct: 274 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFP 313
Score = 138 (53.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 41/152 (26%), Positives = 76/152 (50%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++GN+L + +A +GL L+ L L + + S A+ GL+ L + L N +TS
Sbjct: 86 LQLAGNDLSFIHPKAL--SGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS 143
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P +F+ + LR L L N ++++ +P L L ++ +++ I AFT SL
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL 203
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L+ N++ + L L ++L+ N
Sbjct: 204 VVLHLHNNKIRSLSQHCFDGLDNLETLDLNYN 235
Score = 134 (52.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
G ++L+ L L I I + L +DLS N + +PS F L +++L R
Sbjct: 317 GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQR 374
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N I +I++G FQ + L LD+S + + I AF + ++ ++ N L+ FP +
Sbjct: 375 NQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLN 434
Query: 193 PLLKLMMI 200
L +L ++
Sbjct: 435 GLNQLKLV 442
Score = 134 (52.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 46/167 (27%), Positives = 77/167 (46%)
Query: 41 TIPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGL 98
+IP+ + L+ VL + N ++ L + F GL NL+ L L ++G+ A+ L
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFD--GLDNLETLDLNYNNLGEFPQ-AIKAL 247
Query: 99 TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESR 158
+L E+ N ++ IP F LR ++L NP+S + AF + L L + +
Sbjct: 248 PSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGAS 307
Query: 159 LEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ P TG LES+ L G ++S P + L ++L N
Sbjct: 308 MVQQFPN-LTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYN 353
Score = 48 (22.0 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 506 PTNSELGFDSNDKTPIIDGVSIGGEL 531
P+ ELGF SN + I DG G L
Sbjct: 248 PSLKELGFHSNSISVIPDGAFDGNPL 273
>RGD|1310506 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] RGD:1310506 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 EMBL:CH473976 GeneTree:ENSGT00680000099775 CTD:22865
OMA:IAPYQTR OrthoDB:EOG473PQR IPI:IPI00202395 RefSeq:NP_001101153.1
UniGene:Rn.68333 Ensembl:ENSRNOT00000013009 GeneID:310519
KEGG:rno:310519 UCSC:RGD:1310506 NextBio:662093 Uniprot:D4A062
Length = 979
Score = 211 (79.3 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 64/229 (27%), Positives = 103/229 (44%)
Query: 17 CPSTCICKWKGGKQWM--ECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C C + C+++ I E P + L +S N +Q + + F
Sbjct: 373 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 432
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I + GA L NL + L+ N + + F+ ++ L L N
Sbjct: 433 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 490
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I+ AF +P L L ++ + L + +AF G SL + L N + PV V E
Sbjct: 491 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 549
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPV--QPACTGPERLS 239
L ++ I+L++NPW C C++ K W+ +V V C PE L+
Sbjct: 550 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRTPENLT 598
Score = 170 (64.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQV-LDMSGNNLQILPKEAFRRAGLL 75
C C C+ K + C K I + E L + N+++ L +F L
Sbjct: 44 CFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKLYTNSFLH--LN 101
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
N + L + I +GA +GL L + L +N L + TF + L L N I
Sbjct: 102 NAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVI 161
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+IE GAF+ + L L ++++ + + F A SL + L GNRL R + +
Sbjct: 162 KRIESGAFRNLSKLRVLILNDNLIPVLPTNLFK-AVSLTHLDLRGNRLKVLFYRGMLDHI 220
Query: 196 --KLMMIELHDNPWVCDCNMRSIKMWL 220
LM ++L +NPW C C + +K WL
Sbjct: 221 GRSLMELQLEENPWNCTCEIVQLKSWL 247
Score = 43 (20.2 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 536 PPDYGLPIVGQGQNELLPNNIHPNAKTL 563
PP G ++G Q P H N +TL
Sbjct: 784 PPGMGEVLLGSEQFAETPKENHSNYRTL 811
>MGI|MGI:2661375 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0031103 "axon
regeneration" evidence=TAS] [GO:0031225 "anchored to membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO] [GO:0046658
"anchored to plasma membrane" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2661375 GO:GO:0016021 GO:GO:0009897
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0045121 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GO:GO:0031103 EMBL:AL603905
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OMA:NCTSHRN OrthoDB:EOG4FXR7G
EMBL:AY250218 EMBL:AK033286 EMBL:AK140456 EMBL:BC030471
EMBL:BK001304 IPI:IPI00169628 RefSeq:NP_808376.1 UniGene:Mm.82661
ProteinModelPortal:Q8K0S5 SMR:Q8K0S5 STRING:Q8K0S5 PRIDE:Q8K0S5
Ensembl:ENSMUST00000102514 GeneID:237847 KEGG:mmu:237847
UCSC:uc007kdh.1 eggNOG:NOG254142 InParanoid:Q8K0S5 NextBio:383518
Bgee:Q8K0S5 CleanEx:MM_RTN4RL1 Genevestigator:Q8K0S5
GermOnline:ENSMUSG00000045287 Uniprot:Q8K0S5
Length = 445
Score = 200 (75.5 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 56/199 (28%), Positives = 93/199 (46%)
Query: 54 LDMSGNN-LQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
LD+ N L+ L E F+ GL+ L L+L +C + + +G GL +L + L DN +
Sbjct: 105 LDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIE 162
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F + L L L N + + +G F+ + L +L + E++L+ + +AF
Sbjct: 163 YLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVNLDRLLLHENQLQWVHHKAFHDLHR 222
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L ++ L N L+ + PL+ L + L+ N W C C RS+ WL + C
Sbjct: 223 LTTLFLFNNSLTELQGDCLAPLVALEFLRLNGNAWDCGCRARSLWEWLRRFRGSSSAVPC 282
Query: 233 TGPERLSGKVFSDLHADDF 251
PE G+ L +DF
Sbjct: 283 ATPELRQGQDLKLLRVEDF 301
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 65/270 (24%), Positives = 112/270 (41%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CP C+C + C+ IPE PE ++ + + N + L + F A
Sbjct: 25 CPRDCVCY--PAPMTVSCQAHNFAAIPEGIPED--SERIFLQNNRITFLQQGHFSPA--- 77
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDN--LLTSIPSLTFQSVRFLRDLNLARN 133
+ L++ +I I +G +L E+DL DN L T P TFQ + L L L +
Sbjct: 78 -MVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPE-TFQGLVKLHALYLYKC 135
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEP 193
+S + G F + L L + ++ +E++ + F +L + L+GN+L
Sbjct: 136 GLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRG 195
Query: 194 LLKLMMIELHDNP--WVC-----DCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDL 246
L+ L + LH+N WV D + R ++L + +Q C P L F L
Sbjct: 196 LVNLDRLLLHENQLQWVHHKAFHDLH-RLTTLFLFNNSLTELQGDCLAP--LVALEFLRL 252
Query: 247 HADDFACKPEIRMDSRYVEAVSSENATVVC 276
+ + + C R ++ ++ V C
Sbjct: 253 NGNAWDCGCRARSLWEWLRRFRGSSSAVPC 282
>MGI|MGI:2136810 [details] [associations]
symbol:Lrfn1 "leucine rich repeat and fibronectin type III
domain containing 1" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2136810 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:P21809 MEROPS:I43.001
CTD:57622 eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352
KO:K16354 OMA:PRVSHVC OrthoDB:EOG4TMR1K EMBL:AB243740 EMBL:DQ070870
EMBL:DQ314497 EMBL:AK090175 EMBL:BC004018 IPI:IPI00468602
IPI:IPI00855061 IPI:IPI00895406 RefSeq:NP_001135393.1
RefSeq:NP_085039.2 UniGene:Mm.483073 ProteinModelPortal:Q2WF71
SMR:Q2WF71 IntAct:Q2WF71 STRING:Q2WF71 PhosphoSite:Q2WF71
PaxDb:Q2WF71 PRIDE:Q2WF71 Ensembl:ENSMUST00000055110
Ensembl:ENSMUST00000108288 GeneID:80749 KEGG:mmu:80749
UCSC:uc009fza.1 UCSC:uc009fzb.2 UCSC:uc009fzc.2
GeneTree:ENSGT00660000095307 InParanoid:Q2WF71 NextBio:350107
Bgee:Q2WF71 Genevestigator:Q2WF71 Uniprot:Q2WF71
Length = 766
Score = 204 (76.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 83/327 (25%), Positives = 138/327 (42%)
Query: 36 DKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + + +T + L +S N + + AF A L L+ L L + ++
Sbjct: 74 DNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAF--ADLRALRALHLDSNRLAEVRGD 131
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
L GL NL + L +N + + S F + + + DL+L+ N + + A + L L
Sbjct: 132 QLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTL 191
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-----VRSV----EPLLKLMMIELH 203
+ + ++HI+ F L + + NRL P +RS +P L +
Sbjct: 192 TLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLT-VSFG 250
Query: 204 DNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEI--RMDS 261
NP C+C + +WL C PE L+ + F + ++F C+P + R
Sbjct: 251 GNPLHCNCEL----LWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAG 306
Query: 262 RYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSS 320
V + ++ CR P + W +GRLL N SS R+ +G+ +
Sbjct: 307 GRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGN----SSRTRV----RGD----GT 354
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADA 347
L +T DSG F C+A N AG A A
Sbjct: 355 LDVTITTLRDSGTFTCIASNAAGEATA 381
Score = 178 (67.7 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 54/190 (28%), Positives = 90/190 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP CIC+ M C L+ +P A + + + L ++ N + + + F A + +
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVE-LRLTDNFIAAVRRRDF--ANMTS 90
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R IGQ+ +GA L L + L N L + + + LR L L N I
Sbjct: 91 LVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIR 150
Query: 137 KIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
K+E AF F+ + LD+S + LE + EA +L ++ L+ N + H + L
Sbjct: 151 KVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLH 210
Query: 196 KLMMIELHDN 205
KL+ +++ N
Sbjct: 211 KLVRLDMTSN 220
>RGD|1304707 [details] [associations]
symbol:Lrfn1 "leucine rich repeat and fibronectin type III
domain containing 1" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1304707 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 CTD:57622
eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352 KO:K16354
OMA:PRVSHVC OrthoDB:EOG4TMR1K GeneTree:ENSGT00660000095307
EMBL:AABR03001365 IPI:IPI00360897 RefSeq:NP_001121166.1
UniGene:Rn.87338 ProteinModelPortal:P0C7J6
Ensembl:ENSRNOT00000057073 GeneID:365222 KEGG:rno:365222
UCSC:RGD:1304707 NextBio:686907 ArrayExpress:P0C7J6
Genevestigator:P0C7J6 Uniprot:P0C7J6
Length = 766
Score = 204 (76.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 83/327 (25%), Positives = 138/327 (42%)
Query: 36 DKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + + +T + L +S N + + AF A L L+ L L + ++
Sbjct: 74 DNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAF--ADLRALRALHLDSNRLAEVRGD 131
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
L GL NL + L +N + + S F + + + DL+L+ N + + A + L L
Sbjct: 132 QLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTL 191
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-----VRSV----EPLLKLMMIELH 203
+ + ++HI+ F L + + NRL P +RS +P L +
Sbjct: 192 TLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLT-VSFG 250
Query: 204 DNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEI--RMDS 261
NP C+C + +WL C PE L+ + F + ++F C+P + R
Sbjct: 251 GNPLHCNCEL----LWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAG 306
Query: 262 RYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSS 320
V + ++ CR P + W +GRLL N SS R+ +G+ +
Sbjct: 307 GRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGN----SSRTRV----RGD----GT 354
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADA 347
L +T DSG F C+A N AG A A
Sbjct: 355 LDVTITTLRDSGTFTCIASNAAGEATA 381
Score = 178 (67.7 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 54/190 (28%), Positives = 90/190 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP CIC+ M C L+ +P A + + + L ++ N + + + F A + +
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVE-LRLTDNFIAAVRRRDF--ANMTS 90
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R IGQ+ +GA L L + L N L + + + LR L L N I
Sbjct: 91 LVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIR 150
Query: 137 KIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
K+E AF F+ + LD+S + LE + EA +L ++ L+ N + H + L
Sbjct: 151 KVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLH 210
Query: 196 KLMMIELHDN 205
KL+ +++ N
Sbjct: 211 KLVRLDMTSN 220
>UNIPROTKB|Q86SJ2 [details] [associations]
symbol:AMIGO2 "Amphoterin-induced protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=ISS] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=ISS] [GO:0043069 "negative regulation of
programmed cell death" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AY237005 GO:GO:0016021
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156 EMBL:AB079074
EMBL:AB080610 EMBL:AY454159 EMBL:AL833007 EMBL:BC014103
EMBL:BC047595 EMBL:BC095477 IPI:IPI00238262 RefSeq:NP_001137140.1
RefSeq:NP_862830.1 UniGene:Hs.121520 ProteinModelPortal:Q86SJ2
SMR:Q86SJ2 IntAct:Q86SJ2 STRING:Q86SJ2 DMDM:68052338
PeptideAtlas:Q86SJ2 PRIDE:Q86SJ2 Ensembl:ENST00000266581
Ensembl:ENST00000321382 Ensembl:ENST00000429635
Ensembl:ENST00000550413 GeneID:347902 KEGG:hsa:347902
UCSC:uc001rpk.3 CTD:347902 GeneCards:GC12M047469 HGNC:HGNC:24073
HPA:HPA054004 neXtProt:NX_Q86SJ2 PharmGKB:PA142672626
InParanoid:Q86SJ2 OMA:SCIAMNR OrthoDB:EOG43XV36 PhylomeDB:Q86SJ2
GenomeRNAi:347902 NextBio:99311 ArrayExpress:Q86SJ2 Bgee:Q86SJ2
CleanEx:HS_AMIGO2 Genevestigator:Q86SJ2 GermOnline:ENSG00000139211
Uniprot:Q86SJ2
Length = 522
Score = 208 (78.3 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 96/358 (26%), Positives = 149/358 (41%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ CIC + C +K L +P L + LD+S N + +L E +
Sbjct: 41 CPTACIC----ATDIVSCTNKNLSKVP-GNLFRLIKRLDLSYNRIGLLDSE-WIPVSFAK 94
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L +I I +G+ NL +DLS N L ++ + FQ ++ L L L N IS
Sbjct: 95 LNTLILRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHIS 154
Query: 137 KIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIK---LNGNRLSHFPVRSVE- 192
++ AF + L KL +S + L + + G L + ++ NR+ P+ +
Sbjct: 155 YLDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRFKLAELMFLDVSYNRIPSMPMHHINL 214
Query: 193 -PLLKLMMIELHDNPWVCDCNMRSIKM-W-------LADKKNVPVQPACT--GPERLSGK 241
P +L I LH NP+VCDC++ S+ + W + D KN C R S +
Sbjct: 215 VPGKQLRGIYLHGNPFVCDCSLYSLLVFWYRRHFSSVMDFKN---DYTCRLWSDSRHSRQ 271
Query: 242 VF----SDLHADDFACKPEIRMDSRYVEAVSSENATVVCRVDS-IPPAAISWYWNGRLLL 296
V S ++ D R EA E V C DS A + W G
Sbjct: 272 VLLLQDSFMNCSDSIINGSFRALGFIHEAQVGERLMVHC--DSKTGNANTDFIWVGPDNR 329
Query: 297 NNTAFSSYQRIFVIEQGEYERKSSLVLTNAQESDSGRFYCVAENRAGIADANFTLQVT 354
+ +V G SLV+ + + D+G + C+A N+ + N T+ VT
Sbjct: 330 LLEPDKEMENFYVFHNG------SLVIESPRFEDAGVYSCIAMNKQRLL--NETVDVT 379
Score = 37 (18.1 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 451 ISPNGQ-LPNKTLHSVINISN 470
I+ N Q L N+T+ IN+SN
Sbjct: 364 IAMNKQRLLNETVDVTINVSN 384
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 207 (77.9 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 63/228 (27%), Positives = 108/228 (47%)
Query: 40 ITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
I+ P A ++D G L +P A G++ ++ L + I I +GA
Sbjct: 92 ISCPSACTCS-NNIVDCRGKGLTEIP--ANLPEGIVEIR---LEQNSIKSIPAGAFTQYK 145
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L ID+S N ++ I + FQ ++ L L L N I++I KG F + L L ++ +++
Sbjct: 146 KLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 205
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
+ F ++L + L N+L PL + + L NP+VCDC+++ W
Sbjct: 206 NCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLK----W 261
Query: 220 LADK-KNVPVQPA---CTGPERLSGKVFSDLHADDFACKPEIRMDSRY 263
LAD ++ P++ + C+ P RL+ K S + + F C DS+Y
Sbjct: 262 LADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGN--QDSQY 307
Score = 179 (68.1 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 43/163 (26%), Positives = 75/163 (46%)
Query: 92 SGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVK 151
+G L NL +I+LS+N + + F +++L L N + + F+ + GL
Sbjct: 366 TGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKT 425
Query: 152 LDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDC 211
L + + + +S + F G S+ + L NR+S + L+ L I L NP+ C+C
Sbjct: 426 LMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSNPFNCNC 485
Query: 212 NMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACK 254
++ + WL ++ V P C P L D+ DF C+
Sbjct: 486 HLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCE 528
Score = 174 (66.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 53/187 (28%), Positives = 86/187 (45%)
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
++ E+ L N LT++P R L ++L+ N I + F + L L +S +RL
Sbjct: 570 DVTELYLEGNHLTAVPR-ELSIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRL 628
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
I +F G +SL + L+GN +S P S L L + L NP CDC++R + W
Sbjct: 629 RCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 688
Query: 220 LADKKNVPVQPACTGPERLSGKVFSDLHADDFACK-P-EIRMDSRYVEAVSS---ENATV 274
+ P C+ PE ++ ++ F CK P +I + ++ +SS N T
Sbjct: 689 VKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDINIAAKCNACLSSPCKNNGT- 747
Query: 275 VCRVDSI 281
C D +
Sbjct: 748 -CSQDPV 753
Score = 161 (61.7 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 66/264 (25%), Positives = 120/264 (45%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIP-EAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C ++CR K L IP PE + ++ + N+++ +P AF +
Sbjct: 94 CPSACTCS----NNIVDCRGKGLTEIPANLPEG-IVEIR-LEQNSIKSIPAGAFTQ--YK 145
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L+++ +++ I I + A GL +L + L N +T IP F + L+ L L N I
Sbjct: 146 KLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 205
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + FQ + L L + +++L+ IS F ++++++ L N P + L
Sbjct: 206 NCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN-----PF-VCDCHL 259
Query: 196 KLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPA---CTGPERLSGK--VFSDLHADD 250
K + L DNP S LA+K+ ++ C+G + + + +D+ D
Sbjct: 260 KWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGNQDSQYRHLLVADV-GSD 318
Query: 251 FACKPEIRMDSRYVEAVSSENATV 274
F C + R + V+ + + A V
Sbjct: 319 FLCPDKCRCEGTIVDCSNQKLARV 342
Score = 156 (60.0 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 47/166 (28%), Positives = 83/166 (50%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEA-FRRAGLL 75
CP C C+ G ++C ++ L +P +T L ++ N + +L F++ L
Sbjct: 321 CPDKCRCE---GTI-VDCSNQKLARVPSHLPEYVTD-LRLNDNEISVLEATGVFKK--LP 373
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
NL+K+ L+ I ++ GA DG ++ E+ L+ N L ++ F+ + L+ L L N I
Sbjct: 374 NLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLI 433
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGN 181
S + F + + L + ++R+ I+P AFT SL +I L N
Sbjct: 434 SCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSN 479
Score = 132 (51.5 bits), Expect = 0.00010, P = 0.00010
Identities = 41/145 (28%), Positives = 70/145 (48%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEA--FRRAGL 74
CP C C + + C ++ L +P ++T+ L + GN+L +P+E FR L
Sbjct: 542 CPEQCTCV----ETVVRCSNRGLRALPRGIPKDVTE-LYLEGNHLTAVPRELSIFRHLTL 596
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
++L + IG + + +++L + LS N L IP +F +R LR L L N
Sbjct: 597 IDL-----SNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGND 651
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRL 159
IS + +G+F + L L + + L
Sbjct: 652 ISSVPEGSFNDLTSLSHLALGTNPL 676
>UNIPROTKB|Q9GZU5 [details] [associations]
symbol:NYX "Nyctalopin" species:9606 "Homo sapiens"
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005622 "intracellular" evidence=IDA]
GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0050896 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471141
Orphanet:215 EMBL:Z93015 EMBL:AJ278865 EMBL:AF254868 EMBL:BC112242
IPI:IPI00072576 RefSeq:NP_072089.1 UniGene:Hs.302019
ProteinModelPortal:Q9GZU5 SMR:Q9GZU5 STRING:Q9GZU5
PhosphoSite:Q9GZU5 DMDM:23396778 PRIDE:Q9GZU5 DNASU:60506
Ensembl:ENST00000342595 Ensembl:ENST00000378220 GeneID:60506
KEGG:hsa:60506 UCSC:uc004dfh.2 CTD:60506 GeneCards:GC0XP041306
HGNC:HGNC:8082 MIM:300278 MIM:310500 neXtProt:NX_Q9GZU5
PharmGKB:PA31871 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 InParanoid:Q9GZU5 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W PhylomeDB:Q9GZU5 GenomeRNAi:60506 NextBio:65415
Bgee:Q9GZU5 CleanEx:HS_NYX Genevestigator:Q9GZU5
GermOnline:ENSG00000188937 Uniprot:Q9GZU5
Length = 481
Score = 204 (76.9 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 59/214 (27%), Positives = 96/214 (44%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
GL L+ L L + + +GA L + L+DNLL +P+ F+ +R LR LNL
Sbjct: 204 GLRRLRSLSLQANRVRAVHAGAFGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGG 263
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N + ++ + F + L L + + + + AF L ++ LNGNRL+ + +
Sbjct: 264 NALDRVARAWFADLAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNRLTVLAWVAFQ 323
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDL---HAD 249
P L + L NPW CDC + ++ W+ V P C P ++G S + +
Sbjct: 324 PGFFLGRLFLFRNPWCCDCRLEWLRDWMEGSGRVTDVP-CASPGSVAGLDLSQVTFGRSS 382
Query: 250 DFAC-KPE-IRMDSRYVEAVSSENATVVCRVDSI 281
D C PE + + + AT V R S+
Sbjct: 383 DGLCVDPEELNLTTSSPGPSPEPAATTVSRFSSL 416
Score = 137 (53.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 49/190 (25%), Positives = 83/190 (43%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP+ C C + C L+ +P E + D+ N L+ L + AF L +
Sbjct: 31 CPAACACSTVERGCSVRCDRAGLLRVPAELPCEAVSI-DLDRNGLRFLGERAF--GTLPS 87
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNL-LTSIPSLTFQSVRFLRDLNLARNPI 135
L++L L ++ I GA GL L E+ L+ N L + + TF ++ LR L+LA +
Sbjct: 88 LRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYLHARTFAALSRLRRLDLAACRL 147
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
+ + +P L +L ++ + P A G +L L R+ S++ L
Sbjct: 148 FSVPERLLAELPALRELAAFDNLFRRV-PGALRGLANLTHAHLERGRIEAVASSSLQGLR 206
Query: 196 KLMMIELHDN 205
+L + L N
Sbjct: 207 RLRSLSLQAN 216
Score = 126 (49.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 93 GALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
GAL GL NL L + ++ S + Q +R LR L+L N + + GAF L L
Sbjct: 176 GALRGLANLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRAVHAGAFGDCGVLEHL 235
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
++++ L + +AF G + L ++ L GN L L +L ++ L N
Sbjct: 236 LLNDNLLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELLYLDRN 288
Score = 39 (18.8 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 338 AENRAGIADANFTLQVTYRGVG 359
A G+A+A+ + ++ RGVG
Sbjct: 431 ANTTGGLANASLSDSLSSRGVG 452
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 470 NPDLINDTRKPEGLSPEP 487
+P+ +N T G SPEP
Sbjct: 388 DPEELNLTTSSPGPSPEP 405
>UNIPROTKB|Q9P244 [details] [associations]
symbol:LRFN1 "Leucine-rich repeat and fibronectin type III
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 HSSP:P56276
MEROPS:I43.001 EMBL:AC011445 EMBL:AB040917 EMBL:BC025310
IPI:IPI00793456 RefSeq:NP_065913.1 UniGene:Hs.97860
ProteinModelPortal:Q9P244 SMR:Q9P244 IntAct:Q9P244 STRING:Q9P244
PhosphoSite:Q9P244 DMDM:189028858 PaxDb:Q9P244 PRIDE:Q9P244
Ensembl:ENST00000248668 GeneID:57622 KEGG:hsa:57622 UCSC:uc002okw.2
CTD:57622 GeneCards:GC19M039798 H-InvDB:HIX0015112 HGNC:HGNC:29290
HPA:HPA017383 MIM:612807 neXtProt:NX_Q9P244 PharmGKB:PA134871732
eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352
InParanoid:Q9P244 KO:K16354 OMA:PRVSHVC OrthoDB:EOG4TMR1K
GenomeRNAi:57622 NextBio:64302 Bgee:Q9P244 CleanEx:HS_LRFN1
Genevestigator:Q9P244 Uniprot:Q9P244
Length = 771
Score = 203 (76.5 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 83/327 (25%), Positives = 138/327 (42%)
Query: 36 DKFLITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSG 93
D F+ + + +T + L +S N + + AF A L L+ L L + ++
Sbjct: 74 DNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAF--ADLRALRALHLDSNRLAEVRGD 131
Query: 94 ALDGLTNLIEIDLSDNLLTSIPSLTFQS-VRFLRDLNLARNPISKIEKGAFQFVPGLVKL 152
L GL NL + L +N + + S F + + + DL+L+ N + + A + L L
Sbjct: 132 QLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTL 191
Query: 153 DMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFP-----VRSV----EPLLKLMMIELH 203
+ + ++HI+ F L + + NRL P +RS +P L +
Sbjct: 192 TLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGTGPKPPTPLT-VSFG 250
Query: 204 DNPWVCDCNMRSIKMWLADKKNVPVQPACTGPERLSGKVFSDLHADDFACKPEI--RMDS 261
NP C+C + +WL C PE L+ + F + ++F C+P + R
Sbjct: 251 GNPLHCNCEL----LWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAG 306
Query: 262 RYVEAVSSENATVVCRVDSIPPAAISWYW-NGRLLLNNTAFSSYQRIFVIEQGEYERKSS 320
V + ++ CR P + W +GRLL N SS R+ +G+ +
Sbjct: 307 GRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGN----SSRTRV----RGD----GT 354
Query: 321 LVLTNAQESDSGRFYCVAENRAGIADA 347
L +T DSG F C+A N AG A A
Sbjct: 355 LDVTITTLRDSGTFTCIASNAAGEATA 381
Score = 175 (66.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 53/190 (27%), Positives = 90/190 (47%)
Query: 17 CPSTCICKWKGGKQWMECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLLN 76
CP CIC+ M C L+ +P A + + + L ++ N + + + F A + +
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVE-LRLTDNFIAAVRRRDF--ANMTS 90
Query: 77 LQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPIS 136
L L L+R IGQ+ +GA L L + L N L + + + LR L L N I
Sbjct: 91 LVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIR 150
Query: 137 KIEKGAFQ-FVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
++E AF F+ + LD+S + LE + EA +L ++ L+ N + H + L
Sbjct: 151 RVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLH 210
Query: 196 KLMMIELHDN 205
KL+ +++ N
Sbjct: 211 KLVRLDMTSN 220
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 201 (75.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 52/155 (33%), Positives = 84/155 (54%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFL-ARCHIGQIDSGALDGLTNLIEIDLSDNL 110
+VL ++ N LQ + AF GL N+ + L A C I + +G+T L + L +
Sbjct: 336 EVLSLNNNQLQDIKAGAF--LGLYNVAVMHLSANC-IKTLPEYVFEGVTKLHSLHLEHSC 392
Query: 111 LTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGA 170
L+ I + TF S+ LR L L N IS IE +F+ + L++LD+ +RL H+SP+ F G
Sbjct: 393 LSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGL 452
Query: 171 KSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+LE + L+ N++ + PL +L ++L N
Sbjct: 453 SNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHN 487
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/155 (31%), Positives = 78/155 (50%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L++ N+L +LP + F L NL++L LA + + LT L E+DLS N L
Sbjct: 170 LNLGWNSLVVLPDKVFH--DLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKG 227
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
I F ++ L+ L L N I+ I AF + L LD+S +RL + + F G SL
Sbjct: 228 IKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSL 287
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIEL-HDNPW 207
++L+ N ++ R+ + L L ++L H+ W
Sbjct: 288 HVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIW 322
Score = 159 (61.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 48 SELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLS 107
+EL + LD+SGN L+ + F + L LQKL+L I I A G+ +L +DLS
Sbjct: 213 TELKE-LDLSGNALKGIKINIFVK--LQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLS 269
Query: 108 DNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAF 167
N LTS+ TF + L L L+ N I+ + F+ + L +L + +R+ ++ F
Sbjct: 270 HNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTF 329
Query: 168 TGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
G LE + LN N+L + L + ++ L N
Sbjct: 330 DGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSAN 367
Score = 158 (60.7 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 51/191 (26%), Positives = 84/191 (43%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGL 74
CPS C C + + C + L +P+ + + + + GNN LP AFR L
Sbjct: 36 CPSPCACSLDDYSEELNVFCSGRNLTQLPDDFPTN-AKAIWLDGNNFTQLPAAAFRN--L 92
Query: 75 LNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNP 134
L L L + ++ A GL +L + L N L + TF + L L+L N
Sbjct: 93 SGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNL 152
Query: 135 ISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPL 194
SK+E+G F + L L++ + L + + F +L + L GN+L + + L
Sbjct: 153 FSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSL 212
Query: 195 LKLMMIELHDN 205
+L ++L N
Sbjct: 213 TELKELDLSGN 223
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/179 (26%), Positives = 83/179 (46%)
Query: 41 TIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGL 98
T+PE +T++ L + + L + F + L +L++LFL I I+ + L
Sbjct: 371 TLPEYVFEGVTKLHSLHLEHSCLSKIRANTF--SSLTSLRRLFLQHNAISTIEDQSFREL 428
Query: 99 TNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESR 158
L+E+DL N L+ + F + L L L+ N I I + F + L LD+S ++
Sbjct: 429 HELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQ 488
Query: 159 LEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIK 217
L + T +L + L N L F V + P L + L N W C+C+++ ++
Sbjct: 489 LATLDNAVITQLANLRYLSLRNNSLETFSVGFLCPSFTLEQLWLGGNNWHCNCSLKGLR 547
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 49 ELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSD 108
+ + L + N + L + F GL L+ L L + I +GA GL N+ + LS
Sbjct: 309 QFLEELQLGHNRIWSLAERTFD--GLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSA 366
Query: 109 NLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFT 168
N + ++P F+ V L L+L + +SKI F + L +L + + + I ++F
Sbjct: 367 NCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFR 426
Query: 169 GAKSLESIKLNGNRLSH 185
L + L NRLSH
Sbjct: 427 ELHELLELDLKHNRLSH 443
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 51/163 (31%), Positives = 80/163 (49%)
Query: 45 APESEL-TQ-VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLI 102
AP + L TQ ++ +S NN E AGL NL L L + + L NL
Sbjct: 133 APHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLR 192
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI 162
E+ L+ N L + F S+ L++L+L+ N + I+ F + L KL ++ +++ I
Sbjct: 193 ELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAI 252
Query: 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+P AF G KSL + L+ NRL+ + LL L ++ L N
Sbjct: 253 APRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTN 295
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L ++ N + + AF G+ +L+ L L+ + + GL +L + LS N +
Sbjct: 240 QKLYLNNNQINAIAPRAFM--GMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSI 297
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
TS+ TF+ ++FL +L L N I + + F + L L ++ ++L+ I AF G
Sbjct: 298 TSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLY 357
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
++ + L+ N + P E + KL + L
Sbjct: 358 NVAVMHLSANCIKTLPEYVFEGVTKLHSLHL 388
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 38/152 (25%), Positives = 70/152 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD+ + L + + AF GL +L L L R + + NL+ + L++NL +
Sbjct: 98 LDLQSSQLAAVEQHAFH--GLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSK 155
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ F + L LNL N + + F +P L +L ++ ++L ++ + F L
Sbjct: 156 VEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTEL 215
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ + L+GN L + L KL + L++N
Sbjct: 216 KELDLSGNALKGIKINIFVKLQKLQKLYLNNN 247
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 41/169 (24%), Positives = 83/169 (49%)
Query: 39 LITIPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALD 96
L+ +P+ +L + L ++GN L L + F L L++L L+ + I
Sbjct: 177 LVVLPDKVFHDLPNLRELILAGNKLPYLQHQLF--CSLTELKELDLSGNALKGIKINIFV 234
Query: 97 GLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSE 156
L L ++ L++N + +I F ++ LR L+L+ N ++ + + F + L L +S
Sbjct: 235 KLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLST 294
Query: 157 SRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ + + P F + LE ++L NR+ R+ + L +L ++ L++N
Sbjct: 295 NSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNN 343
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 42/152 (27%), Positives = 67/152 (44%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD+S N L L ++ F GLL+L L L+ I + L L E+ L N + S
Sbjct: 266 LDLSHNRLTSLYEDTF--LGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWS 323
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ TF + L L+L N + I+ GAF + + + +S + ++ + F G L
Sbjct: 324 LAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKL 383
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
S+ L + LS + L L + L N
Sbjct: 384 HSLHLEHSCLSKIRANTFSSLTSLRRLFLQHN 415
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 201 (75.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 50/189 (26%), Positives = 91/189 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + NNL +P AF L +L++L L+ I I A GL NL + L ++ + +
Sbjct: 209 LYLGSNNLTKVPSNAFEV--LKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRN 266
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTG-AKS 172
+ F + L+ L L+ N + + F + L+ L + +R+ I + F S
Sbjct: 267 VTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGAS 326
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPAC 232
L+ + L+ N L+ R ++PL L+ ++ + NPW C+C + ++ WLA + + C
Sbjct: 327 LKILNLSFNNLTALHPRVLKPLSSLIHLQANSNPWECNCKLLGLRDWLASSA-ITLNIYC 385
Query: 233 TGPERLSGK 241
P + G+
Sbjct: 386 QNPPSMRGR 394
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 48/166 (28%), Positives = 86/166 (51%)
Query: 42 IPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+P ++L V L++ N L +L F G++ L+ L L+ +I +I L
Sbjct: 147 VPRGVFNDLVSVQYLNLQRNRLTVLGSGTF--VGMVALRILDLSNNNILRISESGFQHLE 204
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
NL + L N LT +PS F+ ++ LR L+L+ NPI I+ AF+ + L L + SR+
Sbjct: 205 NLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRI 264
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+++ + F+G +L+ + L+ N L + + L L+ ++L N
Sbjct: 265 RNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRN 310
Score = 161 (61.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 55/167 (32%), Positives = 81/167 (48%)
Query: 47 ESELTQV-------LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
ESELT + LD S N L + PK AF + L +L LFL I ++D G GL
Sbjct: 77 ESELTGLHSLVALYLDNS-NILYVYPK-AFVQ--LRHLYFLFLNNNFIKRLDPGIFKGLL 132
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
NL + L N ++ +P F + ++ LNL RN ++ + G F + L LD+S + +
Sbjct: 133 NLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNI 192
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNP 206
IS F ++L + L N L+ P + E L L + L NP
Sbjct: 193 LRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNP 239
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 37/132 (28%), Positives = 71/132 (53%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
++LD+S NN+ + + F+ L NL L+L ++ ++ S A + L +L + LS N +
Sbjct: 183 RILDLSNNNILRISESGFQH--LENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPI 240
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
+I F+ + L L L + I + + F + L L +S + LE+++ + F+ K
Sbjct: 241 EAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLK 300
Query: 172 SLESIKLNGNRL 183
+L +KL+ NR+
Sbjct: 301 NLIYLKLDRNRI 312
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 203 (76.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 56/165 (33%), Positives = 84/165 (50%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+VL + N L+ +P+EA + L +LQ L L HI + GL +L + L DN L
Sbjct: 117 KVLMLQNNQLRQVPEEALQN--LRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T +P F+S+ L+ + LA N I I AF + LV L + +R+ + + F G
Sbjct: 175 TDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH 234
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
SLE++ LN N L FP +++ L L + H N N+RSI
Sbjct: 235 SLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSN------NIRSI 272
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 58/190 (30%), Positives = 93/190 (48%)
Query: 17 CPSTCICKWKGGKQW-MECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C+ G ++C D L +P + S T LD+S NN+ LP R L
Sbjct: 34 CPSYCHCELDGRMLLRVDCSDLGLSELP-SNLSVFTSYLDLSMNNISQLPASLLHR--LR 90
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L++L LA + I GA GL +L + L +N L +P Q++R L+ L L N I
Sbjct: 91 FLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHI 150
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
S + F + L L + ++ L + +AF +L+++ L N++ H + L
Sbjct: 151 SYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLS 210
Query: 196 KLMMIELHDN 205
L+++ LH+N
Sbjct: 211 SLVVLHLHNN 220
Score = 170 (64.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 59/170 (34%), Positives = 83/170 (48%)
Query: 43 PEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLI 102
P+ + + L ++G + LP+ + L NLQ L L+ + + S L G L
Sbjct: 322 PDLTGTATLESLTLTGAKISSLPQTVCDQ--LPNLQVLDLSYNLLEDLPS--LSGCQKLQ 377
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI 162
+IDL N + I TFQ + LR LNLARN I+ I AF +P L+KLD+S + L
Sbjct: 378 KIDLRHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSF 437
Query: 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVE-PLLKLMMIELHDNPWVCDC 211
P TG L +KL GNR + S P LK+ IE+ P+ C
Sbjct: 438 -P--VTGLHGLTHLKLTGNRALQSLIPSANFPELKI--IEM---PYAYQC 479
Score = 159 (61.0 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++GN L +PK AF AGL +L+ L L + Q+ AL L +L + L N ++
Sbjct: 95 LRLAGNALTHIPKGAF--AGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISY 152
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P F + LR L L N ++ + AF+ + L + ++ +++ HI+ AF SL
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSL 212
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L+ NR+ + + L L ++L+ N
Sbjct: 213 VVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 46/154 (29%), Positives = 76/154 (49%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
VL + N + L K+ F GL +L+ L L ++ + + A+ L+NL E+ N +
Sbjct: 214 VLHLHNNRIHSLGKKCFD--GLHSLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNIR 270
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMS-ESRLEHISPEAFTGAK 171
SIP F L ++ NPI + AFQ +P L L ++ S++ P+ TG
Sbjct: 271 SIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQITEF-PD-LTGTA 328
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+LES+ L G ++S P + L L +++L N
Sbjct: 329 TLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYN 362
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 65/198 (32%), Positives = 95/198 (47%)
Query: 42 IPEAPESELTQV--LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+PE L ++ L + G L L AF AGL L++LFL I +D +L GL
Sbjct: 381 LPERAFQGLAKLHSLHLEGGCLARLGPLAF--AGLSGLRRLFLKGNSIADVDERSLGGLA 438
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L+E+DL+ N LT +P FQ + L L LARN +S + A + LD+S +RL
Sbjct: 439 ELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRL 498
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMW 219
E + A L + L N L F + P L+ + +E NPW C C + +++ +
Sbjct: 499 EALPAAALAPLSRLRFLSLRNNSLRTFAPQP--PGLERLWLE--GNPWDCGCALGALRAF 554
Query: 220 -LADKKNVP--VQPACTG 234
L +VP VQ G
Sbjct: 555 ALQQPASVPRFVQALAEG 572
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 47/152 (30%), Positives = 79/152 (51%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L++ N+L +LP AF+ GL L++L LA + + GL L E+DLS N L S
Sbjct: 179 LNLGWNSLTVLPDTAFQ--GLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRS 236
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ + F + L+ L L N ++ + GAF + L LD+S +R+ + ++F G L
Sbjct: 237 VKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGL 296
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
++L+ N L+ R+ + L L ++L N
Sbjct: 297 HVLRLSHNVLAGLRPRTFKDLHFLEELQLGHN 328
Score = 162 (62.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 52/175 (29%), Positives = 81/175 (46%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRA- 72
CP+ C C + C + L +P P T+ L + GNN +P AFR
Sbjct: 45 CPAVCSCGHDDFTDELSVFCSSRNLTQLPGGLPPG--TRALWLDGNNFSSIPAAAFRNLS 102
Query: 73 --GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNL 130
G LNLQ LA ++ AL GL L + L N L ++ + TF L L L
Sbjct: 103 GLGFLNLQGSGLA-----SLEPQALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGL 157
Query: 131 ARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSH 185
+ N +S++++G F+ + L L++ + L + AF G L + L GN+L++
Sbjct: 158 SNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAY 212
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/151 (27%), Positives = 76/151 (50%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
Q L + N + + AF G+ L+ L L+ +G + + GL L + LS N+L
Sbjct: 249 QKLYLDHNLVAAVAPGAF--LGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVL 306
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
+ TF+ + FL +L L N + ++ + AF + L L +++++L+ + P F G +
Sbjct: 307 AGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLR 366
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIEL 202
+L + L+ N L P R+ + L KL + L
Sbjct: 367 NLAVLNLSSNCLRDLPERAFQGLAKLHSLHL 397
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 47/152 (30%), Positives = 74/152 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L +S N L L + FR GL +L L L + + A GL L E+ L+ N L
Sbjct: 155 LGLSNNLLSRLDEGLFR--GLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAY 212
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ F + LR+L+L+RN + ++ F +P L KL + + + ++P AF G K+L
Sbjct: 213 LQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKAL 272
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L+ NR+ S LL L ++ L N
Sbjct: 273 RWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHN 304
Score = 148 (57.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 42 IPEAPESELTQ--VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLT 99
+PE + L Q VL ++ N LQ L F GL NL L L+ + + A GL
Sbjct: 333 LPEEAFAGLGQLEVLALNDNQLQELRPGGF--LGLRNLAVLNLSSNCLRDLPERAFQGLA 390
Query: 100 NLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRL 159
L + L L + L F + LR L L N I+ +++ + + L++LD++ ++L
Sbjct: 391 KLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQL 450
Query: 160 EHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
H+ F LE + L NRLS P ++ PL + +++ N
Sbjct: 451 THLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHN 496
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/152 (28%), Positives = 75/152 (49%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++GN L L F GL L++L L+R + + + L L ++ L NL+ +
Sbjct: 203 LVLAGNKLAYLQPPLF--CGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAA 260
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ F ++ LR L+L+ N + + + +F + GL L +S + L + P F L
Sbjct: 261 VAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFL 320
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
E ++L NRL P + L +L ++ L+DN
Sbjct: 321 EELQLGHNRLRQLPEEAFAGLGQLEVLALNDN 352
Score = 138 (53.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 47/153 (30%), Positives = 72/153 (47%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
VL +S N L L F+ L L++L L + Q+ A GL L + L+DN L
Sbjct: 298 VLRLSHNVLAGLRPRTFK--DLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQ 355
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKS 172
+ F +R L LNL+ N + + + AFQ + L L + L + P AF G
Sbjct: 356 ELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSG 415
Query: 173 LESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
L + L GN ++ RS+ L +L+ ++L N
Sbjct: 416 LRRLFLKGNSIADVDERSLGGLAELLELDLTAN 448
Score = 138 (53.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 63/257 (24%), Positives = 109/257 (42%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
LD+S N + L +++F GLL L L L+ + + L L E+ L N L
Sbjct: 275 LDLSHNRVGSLLEDSF--PGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQ 332
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P F + L L L N + ++ G F + L L++S + L + AF G L
Sbjct: 333 LPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKL 392
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSIKMWLADKKNVPVQPACT 233
S+ L G L+ + L L + L N + D + RS+ LA+ + +
Sbjct: 393 HSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNS-IADVDERSLG-GLAELLELDL--TAN 448
Query: 234 GPERLSGKVFSDLHADDFACKPEIRMDSRYVEAVSSENATVVC-----RVDSIPPAAISW 288
L G++F DL ++ R+ + +A+ T R++++P AA++
Sbjct: 449 QLTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAP 508
Query: 289 YWNGRLL-LNNTAFSSY 304
R L L N + ++
Sbjct: 509 LSRLRFLSLRNNSLRTF 525
Score = 127 (49.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L + N L L F L L L+ + ++D G GL +L +++L N LT
Sbjct: 131 LHLEHNRLHALAAHTFLHTP--GLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTV 188
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P FQ + LR+L LA N ++ ++ F + L +LD+S + L + F L
Sbjct: 189 LPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKL 248
Query: 174 ESIKLNGN 181
+ + L+ N
Sbjct: 249 QKLYLDHN 256
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 527 IGGELDDNYPPDYGLPIVGQGQNEL 551
+G L+D++P GL ++ N L
Sbjct: 282 VGSLLEDSFPGLLGLHVLRLSHNVL 306
>UNIPROTKB|Q8IW52 [details] [associations]
symbol:SLITRK4 "SLIT and NTRK-like protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL080239 EMBL:CH471170 EMBL:BC040986
EMBL:AL713693 EMBL:AK057619 IPI:IPI00217146 RefSeq:NP_001171678.1
RefSeq:NP_001171679.1 RefSeq:NP_775101.1 UniGene:Hs.272284
ProteinModelPortal:Q8IW52 SMR:Q8IW52 PhosphoSite:Q8IW52
DMDM:46396931 PaxDb:Q8IW52 PRIDE:Q8IW52 DNASU:139065
Ensembl:ENST00000338017 Ensembl:ENST00000356928
Ensembl:ENST00000381779 GeneID:139065 KEGG:hsa:139065
UCSC:uc004fbx.3 CTD:139065 GeneCards:GC0XM142715 HGNC:HGNC:23502
HPA:HPA001039 MIM:300562 neXtProt:NX_Q8IW52 PharmGKB:PA134926932
InParanoid:Q8IW52 OMA:TVFVAFC OrthoDB:EOG4VHK5S PhylomeDB:Q8IW52
GenomeRNAi:139065 NextBio:83882 Bgee:Q8IW52 CleanEx:HS_SLITRK4
Genevestigator:Q8IW52 GermOnline:ENSG00000179542 Uniprot:Q8IW52
Length = 837
Score = 202 (76.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 58/208 (27%), Positives = 99/208 (47%)
Query: 17 CPSTCICKWKGGKQWME--CRDKFLITIPEA-PESELTQVLDMSGNNLQILPKEAFRRAG 73
CP+ C CK + C++K + ++ E P+ + L ++GN+++ + F
Sbjct: 342 CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPLNAKKLHVNGNSIKDVDVSDFTDFE 401
Query: 74 LLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARN 133
L+L L L I I LTNL + L+ N + + F + L+ L L N
Sbjct: 402 GLDL--LHLGSNQITVIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYN 459
Query: 134 PISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSV-E 192
I +I G F +P L L ++ + L+ + F+GA L + L N+ + PV V +
Sbjct: 460 LIKEISAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMYLPVSGVLD 518
Query: 193 PLLKLMMIELHDNPWVCDCNMRSIKMWL 220
L L I+L NPW C C++ ++K+W+
Sbjct: 519 QLQSLTQIDLEGNPWDCTCDLVALKLWV 546
Score = 195 (73.7 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 56/200 (28%), Positives = 96/200 (48%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L+ N L IL F + L L + I+ GA GL+ L ++ L++N L
Sbjct: 64 LNFQNNFLNILYPNTF--LNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKI 121
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+ + TF + L L N I IE+GAF + L L ++++ + + F A SL
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFA-SL 180
Query: 174 ESIKLNGNRLSHFPVRSV-EPLLKLMMIELHDNPWVCDCNMRSIKMWLADKK-NVPVQPA 231
+ + GNR+ P V E + +++ ++L DNPW C C++ +K WL + N+ + A
Sbjct: 181 THLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGEA 240
Query: 232 -CTGPERLSGKVFSDLHADD 250
C P L G++ + + +
Sbjct: 241 ICETPSDLYGRLLKETNKQE 260
Score = 49 (22.3 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 420 NKTPSLTPVIETSSFTERKQFPPPSYHSTEMISPNGQLPNKTLHSVIN----ISNPDLIN 475
NK L P+ S F R PPS +PNG +LH ++ +NP I+
Sbjct: 257 NKQ-ELCPMGTGSDFDVR--ILPPSQLENGYTTPNGHTTQTSLHRLVTKPPKTTNPSKIS 313
Query: 476 DTRKPEGLSPEPHNDDVLFQ 495
+ LS + V +Q
Sbjct: 314 GIVAGKALSNRNLSQIVSYQ 333
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 56/165 (33%), Positives = 84/165 (50%)
Query: 52 QVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLL 111
+VL + N L+ +P+EA + L +LQ L L HI + GL +L + L DN L
Sbjct: 117 KVLMLQNNQLRQVPEEALQN--LRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 112 TSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAK 171
T +P F+S+ L+ + LA N I I AF + LV L + +R+ + + F G
Sbjct: 175 TDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH 234
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDNPWVCDCNMRSI 216
SLE++ LN N L FP +++ L L + H N N+RSI
Sbjct: 235 SLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSN------NIRSI 272
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 58/190 (30%), Positives = 93/190 (48%)
Query: 17 CPSTCICKWKGGKQW-MECRDKFLITIPEAPESELTQVLDMSGNNLQILPKEAFRRAGLL 75
CPS C C+ G ++C D L +P + S T LD+S NN+ LP R L
Sbjct: 34 CPSHCHCELDGRMLLRVDCSDLGLSELP-SNLSVFTSYLDLSMNNISQLPASLLHR--LC 90
Query: 76 NLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPI 135
L++L LA + I GA GL +L + L +N L +P Q++R L+ L L N I
Sbjct: 91 FLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHI 150
Query: 136 SKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVEPLL 195
S + F + L L + ++ L + +AF +L+++ L N++ H + L
Sbjct: 151 SYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLS 210
Query: 196 KLMMIELHDN 205
L+++ LH+N
Sbjct: 211 SLVVLHLHNN 220
Score = 160 (61.4 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 54/157 (34%), Positives = 76/157 (48%)
Query: 43 PEAPESELTQVLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLI 102
P + + L ++G + LP+ + L NLQ L L+ + + S L G L
Sbjct: 322 PHLTGTATLESLTLTGAKISSLPQAVCDQ--LPNLQVLDLSYNLLEDLPS--LSGCQKLQ 377
Query: 103 EIDLSDNLLTSIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHI 162
+IDL N + I TFQ + LR LNLA N I+ I AF +P L+KLD+S + L
Sbjct: 378 KIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSF 437
Query: 163 SPEAFTGAKSLESIKLNGNRLSHFPVRSVE-PLLKLM 198
P TG L +KL GNR + S P LK++
Sbjct: 438 -P--VTGLHGLTHLKLTGNRALQSLIPSANFPELKII 471
Score = 153 (58.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 73 GLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTSIPSLTFQSVRFLRDLNLAR 132
G L+ L L I + D L NL +DLS NLL +PSL+ + L+ ++L
Sbjct: 326 GTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDLPSLS--GCQKLQKIDLRH 383
Query: 133 NPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSLESIKLNGNRLSHFPVRSVE 192
N I +I+ FQ + L L+++ +++ I P AF+ SL + L+ N LS FPV +
Sbjct: 384 NEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLH 443
Query: 193 PLLKLMM 199
L L +
Sbjct: 444 GLTHLKL 450
Score = 153 (58.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 54 LDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLTS 113
L ++GN L +PK AF GL +L+ L L + Q+ AL L +L + L N ++
Sbjct: 95 LRLAGNALTHIPKGAF--TGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISY 152
Query: 114 IPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISPEAFTGAKSL 173
+P F + LR L L N ++ + AF+ + L + ++ +++ HI+ AF SL
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSL 212
Query: 174 ESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+ L+ NR+ + + L L ++L+ N
Sbjct: 213 VVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 53 VLDMSGNNLQILPKEAFRRAGLLNLQKLFLARCHIGQIDSGALDGLTNLIEIDLSDNLLT 112
VL + N + L K+ F GL +L+ L L ++ + + A+ L+NL E+ N +
Sbjct: 214 VLHLHNNRIHSLGKKCFD--GLHSLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNIR 270
Query: 113 SIPSLTFQSVRFLRDLNLARNPISKIEKGAFQFVPGLVKLDMSESRLEHISP-EAFTGAK 171
SIP F L ++ NPI + AFQ +P L L ++ + HI+ TG
Sbjct: 271 SIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGA--SHITEFPHLTGTA 328
Query: 172 SLESIKLNGNRLSHFPVRSVEPLLKLMMIELHDN 205
+LES+ L G ++S P + L L +++L N
Sbjct: 329 TLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYN 362
WARNING: HSPs involving 576 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 600 565 0.00078 120 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 826
No. of states in DFA: 619 (66 KB)
Total size of DFA: 336 KB (2169 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.42u 0.12s 52.54t Elapsed: 00:00:04
Total cpu time: 52.56u 0.12s 52.68t Elapsed: 00:00:04
Start: Thu Aug 15 17:16:40 2013 End: Thu Aug 15 17:16:44 2013
WARNINGS ISSUED: 2