BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1673
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P5I8|YIPF5_DANRE Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1
Length = 257
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
MY LL LM+ + V+ V SVLGYCLLPM++L+ VI SLQG +G+ LT + WC++
Sbjct: 163 MYCLLNLMSMT-GVSFGCVASVLGYCLLPMIILSSFGVIFSLQGIMGIILTAAIIGWCSL 221
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 222 SASKIFISALAMDGQQLLVAYPCALLYGVFALIS 255
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +S+ F +G +G+ LT + WC++SASK+ ++ AM QQ LVAYPCA
Sbjct: 186 YCLLPMIILSSFGVIFSLQGIMGIILTAAIIGWCSLSASKIFISALAMDGQQLLVAYPCA 245
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 246 LLYGVFALISVF 257
>sp|Q66KA5|YIPF5_XENTR Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1
Length = 256
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
MY LL LM+ + V+ V+SVLGYCLLPM++L+ VI SLQG +G+ L L + WC+
Sbjct: 162 MYCLLNLMSMT-GVSFGCVSSVLGYCLLPMIILSSFAVIFSLQGILGIVLAALIIGWCSF 220
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 221 SASKIFISALAMDGQQVLVAYPCALLYGVFALIS 254
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +S+ F +G +G+ L L + WC+ SASK+ ++ AM QQ LVAYPCA
Sbjct: 185 YCLLPMIILSSFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQVLVAYPCA 244
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 245 LLYGVFALISVF 256
>sp|Q7SXS2|YIPF5_XENLA Protein YIPF5 OS=Xenopus laevis GN=yipf5 PE=2 SV=1
Length = 256
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
MY LL LM+ + V+ V+SVLGYCLLPM++L+ VI SLQG +G+ L L + WC+
Sbjct: 162 MYCLLNLMSMT-GVSFGCVSSVLGYCLLPMIILSTFAVIFSLQGILGIVLAALIIGWCSF 220
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 221 SASKIFISALAMDGQQLLVAYPCALLYGVFALIS 254
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +ST F +G +G+ L L + WC+ SASK+ ++ AM QQ LVAYPCA
Sbjct: 185 YCLLPMIILSTFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQLLVAYPCA 244
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 245 LLYGVFALISVF 256
>sp|Q5E9E8|YIPF5_BOVIN Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 SV=1
Length = 257
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
M+ LL LM+ + V+ V SVLGYCLLPM++L+ VI SLQG VG+ LT + WC+
Sbjct: 163 MFCLLNLMSMT-GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSF 221
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 222 SASKIFISALAMEGQQLLVAYPCALLYGVFALIS 255
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +S+ F +G VG+ LT + WC+ SASK+ ++ AM QQ LVAYPCA
Sbjct: 186 YCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCA 245
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 246 LLYGVFALISVF 257
>sp|Q4R5M4|YIPF5_MACFA Protein YIPF5 OS=Macaca fascicularis GN=YIPF5 PE=2 SV=1
Length = 257
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
M+ LL LM+ + V+ V SVLGYCLLPM++L+ VI SLQG VG+ LT + WC+
Sbjct: 163 MFCLLNLMSMT-GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSF 221
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 222 SASKIFISALAMEGQQLLVAYPCALLYGVFALIS 255
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +S+ F +G VG+ LT + WC+ SASK+ ++ AM QQ LVAYPCA
Sbjct: 186 YCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCA 245
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 246 LLYGVFALISVF 257
>sp|Q5R6W5|YIPF5_PONAB Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=2 SV=1
Length = 257
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
M+ LL LM+ + V+ V SVLGYCLLPM++L+ VI SLQG VG+ LT + WC+
Sbjct: 163 MFCLLNLMSMT-GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSF 221
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 222 SASKIFISALAMEGQQLLVAYPCALLYGVFALIS 255
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +S+ F +G VG+ LT + WC+ SASK+ ++ AM QQ LVAYPCA
Sbjct: 186 YCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCA 245
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 246 LLYGVFALISVF 257
>sp|Q969M3|YIPF5_HUMAN Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=1 SV=1
Length = 257
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
M+ LL LM+ + V+ V SVLGYCLLPM++L+ VI SLQG VG+ LT + WC+
Sbjct: 163 MFCLLNLMSMT-GVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSF 221
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 222 SASKIFISALAMEGQQLLVAYPCALLYGVFALIS 255
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +S+ F +G VG+ LT + WC+ SASK+ ++ AM QQ LVAYPCA
Sbjct: 186 YCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCA 245
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 246 LLYGVFALISVF 257
>sp|Q9EQQ2|YIPF5_MOUSE Protein YIPF5 OS=Mus musculus GN=Yipf5 PE=2 SV=1
Length = 257
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
M+ LL LM+ + V+ V SVLGYCLLPM++L+ V+ SLQG VG+ LT + WC+
Sbjct: 163 MFCLLNLMSMT-GVSFGCVASVLGYCLLPMILLSSFAVVFSLQGMVGILLTATIIGWCSF 221
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 222 SASKIFISALAMDGQQLLVAYPCALLYGVFALIS 255
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +S+ F +G VG+ LT + WC+ SASK+ ++ AM QQ LVAYPCA
Sbjct: 186 YCLLPMILLSSFAVVFSLQGMVGILLTATIIGWCSFSASKIFISALAMDGQQLLVAYPCA 245
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 246 LLYGVFALISVF 257
>sp|Q5XID0|YIPF5_RAT Protein YIPF5 OS=Rattus norvegicus GN=Yipf5 PE=2 SV=1
Length = 257
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
M+ LL LM+ + V+ V SVLGYCLLPM++L+ V+ SLQG VG+ LT + WC+
Sbjct: 163 MFCLLNLMSMT-GVSFGCVASVLGYCLLPMILLSSFAVVFSLQGMVGILLTATIIGWCSF 221
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY VFALI+
Sbjct: 222 SASKIFISALAMDGQQLLVAYPCALLYGVFALIS 255
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
+ L+ + +S+ F +G VG+ LT + WC+ SASK+ ++ AM QQ LVAYPCA
Sbjct: 186 YCLLPMILLSSFAVVFSLQGMVGILLTATIIGWCSFSASKIFISALAMDGQQLLVAYPCA 245
Query: 150 ILYSVFALITVF 161
+LY VFALI+VF
Sbjct: 246 LLYGVFALISVF 257
>sp|Q8N8F6|YIPF7_HUMAN Protein YIPF7 OS=Homo sapiens GN=YIPF7 PE=1 SV=2
Length = 280
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
++ LL LM++S V+ V SVLGYCLLPMV+L+G + SLQG G+ +++ + WC++
Sbjct: 186 IHALLNLMSSS-GVSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIGWCSL 244
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ + M QQ LVAYPCAILY +FAL+T
Sbjct: 245 SASKIFIAALHMEGQQLLVAYPCAILYGLFALLT 278
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 79 VAYPCAILYSVFALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMS 138
V+Y C + L+ V +S F +G G+ +++ + WC++SASK+ + M
Sbjct: 198 VSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIGWCSLSASKIFIAALHME 257
Query: 139 HQQPLVAYPCAILYSVFALITVF 161
QQ LVAYPCAILY +FAL+T+F
Sbjct: 258 GQQLLVAYPCAILYGLFALLTIF 280
>sp|Q9JIM5|YIPF7_MOUSE Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1
Length = 254
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
++ LL LM+ S V+ V SVLGYCLLPMV+L+ V SLQG +G +L + WC++
Sbjct: 160 IHALLNLMSNS-GVSYGCVASVLGYCLLPMVLLSSCAVFFSLQGTIGTMSALLIITWCSL 218
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ ++ AM QQ LVAYPCA+LY +FAL+T
Sbjct: 219 SASKIFISALAMEGQQLLVAYPCALLYGLFALLT 252
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 79 VAYPCAILYSVFALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMS 138
V+Y C + L+ V +S+ F +G +G +L + WC++SASK+ ++ AM
Sbjct: 172 VSYGCVASVLGYCLLPMVLLSSCAVFFSLQGTIGTMSALLIITWCSLSASKIFISALAME 231
Query: 139 HQQPLVAYPCAILYSVFALITVF 161
QQ LVAYPCA+LY +FAL+TVF
Sbjct: 232 GQQLLVAYPCALLYGLFALLTVF 254
>sp|A5D7K7|YIPF7_BOVIN Protein YIPF7 OS=Bos taurus GN=YIPF7 PE=2 SV=1
Length = 255
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
++ LL LM++S V+ V SVLGYCLLPMV+L+ + SLQG G ++ + WC++
Sbjct: 161 IHALLNLMSSS-GVSYGCVASVLGYCLLPMVILSSCAIFFSLQGTFGTVSALVIIGWCSL 219
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ + AM QQ L+AYPCA+LY +FAL+T
Sbjct: 220 SASKIFTSALAMEGQQLLIAYPCALLYGLFALVT 253
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 79 VAYPCAILYSVFALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMS 138
V+Y C + L+ V +S+ F +G G ++ + WC++SASK+ + AM
Sbjct: 173 VSYGCVASVLGYCLLPMVILSSCAIFFSLQGTFGTVSALVIIGWCSLSASKIFTSALAME 232
Query: 139 HQQPLVAYPCAILYSVFALITVF 161
QQ L+AYPCA+LY +FAL+TVF
Sbjct: 233 GQQLLIAYPCALLYGLFALVTVF 255
>sp|Q54QY3|YIPF5_DICDI Protein YIPF5 homolog OS=Dictyostelium discoideum GN=yipf5 PE=3
SV=1
Length = 212
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60
MY +L LM+ + I V SVLGYCLLPM+ L+ ++I+++ G VG L ++W
Sbjct: 118 MYIVLNLMSEK-GIDIYRVISVLGYCLLPMIFLSFTSLIININGMVGYILIGFAIVWSTY 176
Query: 61 SASKLLVTCFAMSHQQPLVAYPCAILYSVFALIT 94
SASK+ V +M Q+ LVAYP +LY+ FALIT
Sbjct: 177 SASKMFVKVLSMIDQRILVAYPVGLLYTGFALIT 210
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 66 LVTCFAMSHQQPLVAYPCAILYSVFALITFVTMSTVLTPFVS-----RGAVGLSLTILTV 120
L+ C +M L++ +Y V +++ + + + F S G VG L +
Sbjct: 112 LIGCVSMYIVLNLMSEKGIDIYRVISVLGYCLLPMIFLSFTSLIININGMVGYILIGFAI 171
Query: 121 LWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVFALITVF 161
+W SASK+ V +M Q+ LVAYP +LY+ FALIT F
Sbjct: 172 VWSTYSASKMFVKVLSMIDQRILVAYPVGLLYTGFALITAF 212
>sp|O94348|YIP1_SCHPO Protein transport protein yip1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=yip1 PE=3 SV=1
Length = 227
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 10 TSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTC 69
++ N+ + SVLGY LLP+VV+A I + G G +L L +WC +AS + V
Sbjct: 139 SAKNLFFTRTVSVLGYSLLPLVVIAFFKNIFTFNGIAGYALAALACIWCTYAASAMFVGI 198
Query: 70 FAMSHQQPLVAYPCAILYSVFALIT 94
+++ + LVAYP A+ Y VFA+IT
Sbjct: 199 LQVNNMRFLVAYPIALFYGVFAVIT 223
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 90 FALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCA 149
++L+ V ++ F G G +L L +WC +AS + V +++ + LVAYP A
Sbjct: 154 YSLLPLVVIAFFKNIFTFNGIAGYALAALACIWCTYAASAMFVGILQVNNMRFLVAYPIA 213
Query: 150 ILYSVFALITVF 161
+ Y VFA+ITVF
Sbjct: 214 LFYGVFAVITVF 225
>sp|P53039|YIP1_YEAST Protein transport protein YIP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YIP1 PE=1 SV=1
Length = 248
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 9 ATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVT 68
+T N+ S+LGYC LP+ L+ + + L G +++L V+W ++S L +
Sbjct: 160 STQTNLQFFNTASILGYCFLPLCFLSLLGIFHGLNNTTGYVVSVLFVIWSTWTSSGFLNS 219
Query: 69 CFAMSHQQPLVAYPCAILYSVFALI 93
+ + + L+AYP I YSVFAL+
Sbjct: 220 LLQLQNARLLIAYPLLIFYSVFALM 244
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 108 RGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVFALITVF 161
G +++L V+W ++S L + + + + L+AYP I YSVFAL+ +F
Sbjct: 194 NNTTGYVVSVLFVIWSTWTSSGFLNSLLQLQNARLLIAYPLLIFYSVFALMVIF 247
>sp|Q5ZJD7|YIPF4_CHICK Protein YIPF4 OS=Gallus gallus GN=YIPF4 PE=2 SV=1
Length = 249
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 13 NVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAM 72
V V V+GY LLP++V+A V +++ V + + V W A SA+ LLV
Sbjct: 166 EVAYGQVLGVIGYSLLPLIVIAPVLLVVGSFEVVSTLIKLFGVFWAAYSAASLLVGE-EF 224
Query: 73 SHQQPLVAYPCAILYSVF 90
++PL+ YP +LY F
Sbjct: 225 KTKKPLLIYPIFLLYIYF 242
>sp|Q6NYF1|YIPF4_DANRE Protein YIPF4 OS=Danio rerio GN=yipf4 PE=2 SV=1
Length = 237
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 13 NVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAM 72
V+ V V+GY LLP++V+A + +++ V + + V W A SA+ LLV
Sbjct: 154 EVSYGQVLGVIGYSLLPLIVIAPLLLVIGGFEVVSTLIKLFGVFWAAYSAASLLVGD-EF 212
Query: 73 SHQQPLVAYPCAILYSVF 90
++PL+ YP +LY F
Sbjct: 213 KTKKPLLIYPIFLLYIYF 230
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 115 LTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVF 155
+ + V W A SA+ LLV ++PL+ YP +LY F
Sbjct: 191 IKLFGVFWAAYSAASLLVGD-EFKTKKPLLIYPIFLLYIYF 230
>sp|Q9BSR8|YIPF4_HUMAN Protein YIPF4 OS=Homo sapiens GN=YIPF4 PE=1 SV=1
Length = 244
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 13 NVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAM 72
V V V+GY LLP++V+A V +++ V + + V W A SA+ LLV
Sbjct: 161 EVAYGQVLGVIGYSLLPLIVIAPVLLVVGSFEVVSTLIKLFGVFWAAYSAASLLVGE-EF 219
Query: 73 SHQQPLVAYPCAILYSVF 90
++PL+ YP +LY F
Sbjct: 220 KTKKPLLIYPIFLLYIYF 237
>sp|Q5M7T4|YIPF4_RAT Protein YIPF4 OS=Rattus norvegicus GN=Yipf4 PE=2 SV=1
Length = 246
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 13 NVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAM 72
V V V+GY LLP++V+A + +++ V + + V W A SA+ LLV
Sbjct: 163 EVAYGQVLGVIGYSLLPLIVIAPILLVVGSFEMVSTLIKLFGVFWAAYSAASLLVGE-EF 221
Query: 73 SHQQPLVAYPCAILYSVF 90
++PL+ YP +LY F
Sbjct: 222 KTKKPLLIYPIFLLYIYF 239
>sp|Q8C407|YIPF4_MOUSE Protein YIPF4 OS=Mus musculus GN=Yipf4 PE=2 SV=1
Length = 246
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 13 NVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAM 72
V V V+GY LLP++V+A + +++ V + + V W A SA+ LLV
Sbjct: 163 EVAYGQVLGVIGYSLLPLIVIAPILLVVGSFEMVSTLIKLFGVFWAAYSAASLLVGE-EF 221
Query: 73 SHQQPLVAYPCAILYSVF 90
++PL+ YP +LY F
Sbjct: 222 KTKKPLLIYPIFLLYIYF 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,617,435
Number of Sequences: 539616
Number of extensions: 1400309
Number of successful extensions: 5255
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 5200
Number of HSP's gapped (non-prelim): 88
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 56 (26.2 bits)