Query psy1673
Match_columns 161
No_of_seqs 183 out of 463
Neff 6.4
Searched_HMMs 46136
Date Fri Aug 16 20:31:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1673.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1673hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3103|consensus 100.0 1.8E-28 3.9E-33 198.7 8.1 126 29-161 122-249 (249)
2 KOG3103|consensus 99.9 5.4E-24 1.2E-28 172.7 4.2 94 1-95 155-248 (249)
3 COG5080 YIP1 Rab GTPase intera 99.8 3.6E-19 7.8E-24 142.4 7.4 126 29-161 99-226 (227)
4 COG5080 YIP1 Rab GTPase intera 99.7 1.3E-17 2.9E-22 133.5 3.8 92 1-93 132-223 (227)
5 KOG2946|consensus 99.5 3E-14 6.5E-19 115.0 5.1 81 11-93 148-229 (234)
6 KOG2946|consensus 99.1 3E-10 6.4E-15 92.0 8.5 126 29-160 103-231 (234)
7 PF04893 Yip1: Yip1 domain; I 93.2 0.073 1.6E-06 39.8 2.5 65 12-76 93-158 (172)
8 PF04893 Yip1: Yip1 domain; I 77.2 12 0.00026 27.5 6.6 60 84-143 100-160 (172)
9 PF09574 DUF2374: Protein of 46.8 11 0.00023 23.0 0.9 16 22-37 11-26 (42)
10 TIGR02808 short_TIGR02808 cons 41.2 12 0.00025 22.8 0.5 16 22-37 11-26 (42)
11 PF06930 DUF1282: Protein of u 29.4 46 0.001 25.4 2.3 53 6-60 84-138 (170)
12 PHA02737 hypothetical protein; 28.6 29 0.00062 23.7 0.9 12 137-148 41-52 (72)
13 PTZ00459 mucin-associated surf 22.2 51 0.0011 28.0 1.5 11 114-124 11-21 (291)
14 PF15190 DUF4583: Domain of un 21.3 44 0.00096 25.1 0.8 12 23-34 96-107 (128)
15 PF06930 DUF1282: Protein of u 21.2 3.7E+02 0.0081 20.3 9.4 58 81-140 96-153 (170)
No 1
>KOG3103|consensus
Probab=99.95 E-value=1.8e-28 Score=198.74 Aligned_cols=126 Identities=36% Similarity=0.545 Sum_probs=107.2
Q ss_pred HHHHH--HHHHHHHhccccchhHHHHHHHHHHHHHhHHHHhhhhccCCCccccccchhHhhhHHHHHHHHHHhhcccccc
Q psy1673 29 PMVVL--AGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVFALITFVTMSTVLTPFV 106 (161)
Q Consensus 29 Plvi~--a~i~Llls~k~~fg~I~g~~~v~Wst~sas~~f~~~~~~~~~r~Lv~YP~~L~y~~y~llpi~~~s~~~~~~~ 106 (161)
|+++. ....+++++|.|||||||+..++..+... ++..+. + .-+.|.++....|||++|++++|.++++++
T Consensus 122 Plvf~L~f~~flLl~gKi~FgyIygi~~~gsl~iy~--L~nlm~----~-~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~ 194 (249)
T KOG3103|consen 122 PLVFCLLFGLFLLLAGKIHFGYIYGISLLGSLSIYF--LLNLMS----N-KNVSFGCVASVLGYCLLPLVVLSFVNIFVG 194 (249)
T ss_pred chHHHHHHHHHHHhcCceEEEEEeeeHHHHHHHHHH--HHHHHh----h-cCcceeeehHHHHHHHHHHHHHHHHHHHHh
Confidence 44444 44456788999999999998887666543 322222 1 236788888888999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhhhHHHHHHhhccCCccceeeechHHHHHHHHhhhcC
Q psy1673 107 SRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVFALITVF 161 (161)
Q Consensus 107 ~~~~~~~~l~~~~v~Wst~sas~~f~~~~~~~~~r~LvaYP~~L~Y~~f~ll~if 161 (161)
.++.+|++++.++|+||||+||++|+++++|||||+||+|||+++|++|+++++|
T Consensus 195 ~~g~vg~il~~~~v~W~t~aaS~lfv~al~~~~~rlLiaYp~~l~Y~~Fall~if 249 (249)
T KOG3103|consen 195 LQGTVGYILSALFVLWCTYAASKLFVSALSMENQRLLVAYPCALLYGVFALIVIF 249 (249)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHhhheeEEeC
Confidence 9999999999999999999999999999999999999999999999999999987
No 2
>KOG3103|consensus
Probab=99.89 E-value=5.4e-24 Score=172.70 Aligned_cols=94 Identities=57% Similarity=0.984 Sum_probs=89.5
Q ss_pred ChhhhhcccCCCceeEEeeeeechhchHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHhHHHHhhhhccCCCccccc
Q psy1673 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVA 80 (161)
Q Consensus 1 ~y~l~nl~~~~~~i~~~~~~~vlGYcllPlvi~a~i~Llls~k~~fg~I~g~~~v~Wst~sas~~f~~~~~~~~~r~Lv~ 80 (161)
||+|+|+|++ |+++|.+|+||+|||++|+++++.+.++++.++..|++++...+.||+++++++|++..+++|||.|++
T Consensus 155 iy~L~nlm~~-~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~vg~il~~~~v~W~t~aaS~lfv~al~~~~~rlLia 233 (249)
T KOG3103|consen 155 IYFLLNLMSN-KNVSFGCVASVLGYCLLPLVVLSFVNIFVGLQGTVGYILSALFVLWCTYAASKLFVSALSMENQRLLVA 233 (249)
T ss_pred HHHHHHHHhh-cCcceeeehHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhh
Confidence 5999999995 999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred cchhHhhhHHHHHHH
Q psy1673 81 YPCAILYSVFALITF 95 (161)
Q Consensus 81 YP~~L~y~~y~llpi 95 (161)
|||.++|.+++++.+
T Consensus 234 Yp~~l~Y~~Fall~i 248 (249)
T KOG3103|consen 234 YPCALLYGVFALIVI 248 (249)
T ss_pred hHHHHHHhhheeEEe
Confidence 999999998887643
No 3
>COG5080 YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]
Probab=99.78 E-value=3.6e-19 Score=142.45 Aligned_cols=126 Identities=22% Similarity=0.350 Sum_probs=100.2
Q ss_pred HHHHHHHHHHH--HhccccchhHHHHHHHHHHHHHhHHHHhhhhccCCCccccccchhHhhhHHHHHHHHHHhhcccccc
Q psy1673 29 PMVVLAGVNVI--LSLQGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVFALITFVTMSTVLTPFV 106 (161)
Q Consensus 29 Plvi~a~i~Ll--ls~k~~fg~I~g~~~v~Wst~sas~~f~~~~~~~~~r~Lv~YP~~L~y~~y~llpi~~~s~~~~~~~ 106 (161)
|+++.-..+++ +++|.||||||++..++ +.+.+..+..+ + +|.+-...++... |||++|++..|+++.++.
T Consensus 99 PliF~lL~sLfLsla~~shFgyiy~islfg--~lsl~~~lrLl-~---~~ni~f~~~~SIl-GYs~lPlv~~slv~~i~~ 171 (227)
T COG5080 99 PLIFILLYSLFLSLAGKSHFGYIYGISLFG--TLSLHLLLRLL-G---HKNISFFSTISIL-GYSLLPLVFNSLVSIILG 171 (227)
T ss_pred cHHHHHHHHHHHHhcccceeehhhHHHHHH--HHHHHHHHHHh-c---cCceeeeehhHHh-hhhHHHHHHHHHHHHHHH
Confidence 55555555544 56789999999977754 33333343222 2 3335555655555 799999999999999988
Q ss_pred cCChhHHHHHHHHHHHHHhhhHHHHHHhhccCCccceeeechHHHHHHHHhhhcC
Q psy1673 107 SRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVFALITVF 161 (161)
Q Consensus 107 ~~~~~~~~l~~~~v~Wst~sas~~f~~~~~~~~~r~LvaYP~~L~Y~~f~ll~if 161 (161)
..+..+.++.+++..||+++||.++++.++.++||.+++||+.|+|.+|++++.|
T Consensus 172 ~i~i~~~vv~~l~~~Ws~~AaS~v~~~~l~l~n~~llv~Ypl~LFY~~fa~ii~f 226 (227)
T COG5080 172 RILILGYVVVALFLIWSTYAASGVLKSKLQLSNKRLLVVYPLLLFYNVFAIIIKF 226 (227)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhheEEEEe
Confidence 8888899999999999999999999999999999999999999999999998865
No 4
>COG5080 YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]
Probab=99.69 E-value=1.3e-17 Score=133.46 Aligned_cols=92 Identities=34% Similarity=0.584 Sum_probs=82.0
Q ss_pred ChhhhhcccCCCceeEEeeeeechhchHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHhHHHHhhhhccCCCccccc
Q psy1673 1 MYGLLYLMATSPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVA 80 (161)
Q Consensus 1 ~y~l~nl~~~~~~i~~~~~~~vlGYcllPlvi~a~i~Llls~k~~fg~I~g~~~v~Wst~sas~~f~~~~~~~~~r~Lv~ 80 (161)
||+++|+|+. ++|+|+|++||+|||++|+++.+.++.++.....-+++....+..|++++++..+.+..+.+++|.+++
T Consensus 132 l~~~lrLl~~-~ni~f~~~~SIlGYs~lPlv~~slv~~i~~~i~i~~~vv~~l~~~Ws~~AaS~v~~~~l~l~n~~llv~ 210 (227)
T COG5080 132 LHLLLRLLGH-KNISFFSTISILGYSLLPLVFNSLVSIILGRILILGYVVVALFLIWSTYAASGVLKSKLQLSNKRLLVV 210 (227)
T ss_pred HHHHHHHhcc-CceeeeehhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 4789999995 999999999999999999999999999987655667777677899999999999998889999999999
Q ss_pred cchhHhhhHHHHH
Q psy1673 81 YPCAILYSVFALI 93 (161)
Q Consensus 81 YP~~L~y~~y~ll 93 (161)
||+.++|.+++++
T Consensus 211 Ypl~LFY~~fa~i 223 (227)
T COG5080 211 YPLLLFYNVFAII 223 (227)
T ss_pred HHHHHHHhhheEE
Confidence 9999999876543
No 5
>KOG2946|consensus
Probab=99.48 E-value=3e-14 Score=115.03 Aligned_cols=81 Identities=23% Similarity=0.449 Sum_probs=66.1
Q ss_pred CCceeEEeeeeechhchHHHHHHH-HHHHHHhccccchhHHHHHHHHHHHHHhHHHHhhhhccCCCccccccchhHhhhH
Q psy1673 11 SPNVTISTVTSVLGYCLLPMVVLA-GVNVILSLQGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSV 89 (161)
Q Consensus 11 ~~~i~~~~~~~vlGYcllPlvi~a-~i~Llls~k~~fg~I~g~~~v~Wst~sas~~f~~~~~~~~~r~Lv~YP~~L~y~~ 89 (161)
+|+|||+|+.|++|||++|+++.+ ..+++-. ....+...+..+..|+++++-.++. ..+.++||.++.||++++|..
T Consensus 148 GgnIs~fQsl~IlGYCLfPl~v~ali~~~~~~-l~~lr~vv~~~~~~WSsyaa~~~l~-~~~~~~kk~LavYPvFL~y~~ 225 (234)
T KOG2946|consen 148 GGNISFFQSLCILGYCLFPLVVAALIICLFRD-LFFLRLVVTSIGLAWSSYAAMGFLS-ISQLPRKKLLAVYPVFLFYFS 225 (234)
T ss_pred CCceeEEeehhhhhhcccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhh-ccccccccceehhhHHHHHHh
Confidence 499999999999999999999998 4454433 2456788889999999999877764 367789999999999999975
Q ss_pred HHHH
Q psy1673 90 FALI 93 (161)
Q Consensus 90 y~ll 93 (161)
.+++
T Consensus 226 ~s~l 229 (234)
T KOG2946|consen 226 VSWL 229 (234)
T ss_pred hheE
Confidence 5543
No 6
>KOG2946|consensus
Probab=99.12 E-value=3e-10 Score=92.02 Aligned_cols=126 Identities=17% Similarity=0.352 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhccccch---hHHHHHHHHHHHHHhHHHHhhhhccCCCccccccchhHhhhHHHHHHHHHHhhccccc
Q psy1673 29 PMVVLAGVNVILSLQGAVG---LSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVFALITFVTMSTVLTPF 105 (161)
Q Consensus 29 Plvi~a~i~Llls~k~~fg---~I~g~~~v~Wst~sas~~f~~~~~~~~~r~Lv~YP~~L~y~~y~llpi~~~s~~~~~~ 105 (161)
|+.+...+++.+++...++ ..-.+..+.|+...-..+-.+..+ . -+.|-..+...|||++|.++.|.+...+
T Consensus 103 Pl~~~~~la~iL~~s~~~~~~~vFs~vf~i~wfG~~vvtln~kLLG-g----nIs~fQsl~IlGYCLfPl~v~ali~~~~ 177 (234)
T KOG2946|consen 103 PLFFCVFLALILSLSGSVKSASVFAVVFAILWFGAVVVTLNIKLLG-G----NISFFQSLCILGYCLFPLVVAALIICLF 177 (234)
T ss_pred hhHHHHHHHHHHHhhcCcccchhHHHHHHHHHHHHHHHHHHHHHhC-C----ceeEEeehhhhhhcccHHHHHHHHHHHH
Confidence 6666666666655544333 333333444443322112112222 1 2444445555589999999998544334
Q ss_pred ccCChhHHHHHHHHHHHHHhhhHHHHHHhhccCCccceeeechHHHHHHHHhhhc
Q psy1673 106 VSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPLVAYPCAILYSVFALITV 160 (161)
Q Consensus 106 ~~~~~~~~~l~~~~v~Wst~sas~~f~~~~~~~~~r~LvaYP~~L~Y~~f~ll~i 160 (161)
.....++..++.++..||+|+|-.+.+. .+.++||.|+.||++|+|..++++.+
T Consensus 178 ~~l~~lr~vv~~~~~~WSsyaa~~~l~~-~~~~~kk~LavYPvFL~y~~~s~lii 231 (234)
T KOG2946|consen 178 RDLFFLRLVVTSIGLAWSSYAAMGFLSI-SQLPRKKLLAVYPVFLFYFSVSWLII 231 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhc-cccccccceehhhHHHHHHhhheEEE
Confidence 4467889999999999999999998887 55599999999999999999988753
No 7
>PF04893 Yip1: Yip1 domain; InterPro: IPR006977 This entry contains proteins belonging to the Yip1 family and represents the Yip1 domain. The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases [].; GO: 0016020 membrane
Probab=93.17 E-value=0.073 Score=39.76 Aligned_cols=65 Identities=28% Similarity=0.427 Sum_probs=46.0
Q ss_pred CceeEEeeeeechhchHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHhHHHHhhhhccCCCc
Q psy1673 12 PNVTISTVTSVLGYCLLPMVVLAGVNVILSL-QGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQ 76 (161)
Q Consensus 12 ~~i~~~~~~~vlGYcllPlvi~a~i~Llls~-k~~fg~I~g~~~v~Wst~sas~~f~~~~~~~~~r 76 (161)
|+-++.|+.++.||+..|..+...+...... ..+...........|+.+-...-+....+.+++|
T Consensus 93 g~~~~~~~~~~~~ya~~P~~~~~~~~~~~~~~~~~~~~~~~~l~~iw~~~l~~~gl~~~~~~~~~k 158 (172)
T PF04893_consen 93 GKGSFKETFSVVGYALIPLLLGSLISIILSLFFGPLSLLVIILFSIWSAYLLVIGLREVHRLSRGK 158 (172)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 7788999999999999999999999876543 2223445566777788876655554444555555
No 8
>PF04893 Yip1: Yip1 domain; InterPro: IPR006977 This entry contains proteins belonging to the Yip1 family and represents the Yip1 domain. The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases [].; GO: 0016020 membrane
Probab=77.21 E-value=12 Score=27.55 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=46.0
Q ss_pred hHhhhHHHHHHHHHHhhccccccc-CChhHHHHHHHHHHHHHhhhHHHHHHhhccCCccce
Q psy1673 84 AILYSVFALITFVTMSTVLTPFVS-RGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQQPL 143 (161)
Q Consensus 84 ~L~y~~y~llpi~~~s~~~~~~~~-~~~~~~~l~~~~v~Wst~sas~~f~~~~~~~~~r~L 143 (161)
..-..+|+..|......+...... .+........++..|+.+-...-..+..+++++|-.
T Consensus 100 ~~~~~~ya~~P~~~~~~~~~~~~~~~~~~~~~~~~l~~iw~~~l~~~gl~~~~~~~~~ka~ 160 (172)
T PF04893_consen 100 TFSVVGYALIPLLLGSLISIILSLFFGPLSLLVIILFSIWSAYLLVIGLREVHRLSRGKAF 160 (172)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH
Confidence 444457999999998888776542 233455778899999999999999998888877754
No 9
>PF09574 DUF2374: Protein of unknown function (Duf2374); InterPro: IPR014175 This very small protein (about 46 amino acids) consists largely of a single predicted membrane-spanning region. It is found in Photobacterium profundum SS9 and in three species of Vibrio, always near periplasmic nitrate reductase genes, but far from the periplasmic nitrate reductase genes in Aeromonas hydrophila ATCC 7966.
Probab=46.76 E-value=11 Score=23.04 Aligned_cols=16 Identities=44% Similarity=1.057 Sum_probs=14.0
Q ss_pred echhchHHHHHHHHHH
Q psy1673 22 VLGYCLLPMVVLAGVN 37 (161)
Q Consensus 22 vlGYcllPlvi~a~i~ 37 (161)
++||+-.|..+++++.
T Consensus 11 vLGY~AmPvI~L~GF~ 26 (42)
T PF09574_consen 11 VLGYAAMPVIILSGFA 26 (42)
T ss_pred HhccccchHHHHhhHH
Confidence 6899999999988764
No 10
>TIGR02808 short_TIGR02808 conserved hypothetical protein TIGR02808. This very small protein (about 46 amino acids) consists largely of a single predicted membrane-spanning region. It is found in Photobacterium profundum SS9 and in three species of Vibrio, always near periplasmic nitrate reductase genes, but far from the periplasmic nitrate reductase genes in Aeromonas hydrophila ATCC7966.
Probab=41.20 E-value=12 Score=22.84 Aligned_cols=16 Identities=44% Similarity=0.966 Sum_probs=13.8
Q ss_pred echhchHHHHHHHHHH
Q psy1673 22 VLGYCLLPMVVLAGVN 37 (161)
Q Consensus 22 vlGYcllPlvi~a~i~ 37 (161)
++||+-.|..+++++.
T Consensus 11 ilGY~AmPvIil~GF~ 26 (42)
T TIGR02808 11 VLGYGAMPFIILSGFV 26 (42)
T ss_pred HhcccccchHHhhhhH
Confidence 6899999999988764
No 11
>PF06930 DUF1282: Protein of unknown function (DUF1282); InterPro: IPR009698 This entry represents several hypothetical proteins of around 200 residues in length. The function of is unknown although a number of the members are thought to be putative membrane proteins.
Probab=29.38 E-value=46 Score=25.44 Aligned_cols=53 Identities=13% Similarity=0.168 Sum_probs=35.0
Q ss_pred hcccC--CCceeEEeeeeechhchHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q psy1673 6 YLMAT--SPNVTISTVTSVLGYCLLPMVVLAGVNVILSLQGAVGLSLTILTVLWCAM 60 (161)
Q Consensus 6 nl~~~--~~~i~~~~~~~vlGYcllPlvi~a~i~Llls~k~~fg~I~g~~~v~Wst~ 60 (161)
|.|++ +++-++.|+.-.-+|...|+.+........+ .++....+.....|+.+
T Consensus 84 ~~~~~~~~~~~s~~~~~~~a~y~~tPl~L~~i~~~~~~--~~l~~~~~~~~~~~~~~ 138 (170)
T PF06930_consen 84 HWMMKTFGGRPSYKKCLAFAAYAATPLFLGGIVNLYPS--LWLTLLVGLIALIYSVY 138 (170)
T ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 44443 3777888999999999999998777766654 33333344444445443
No 12
>PHA02737 hypothetical protein; Provisional
Probab=28.57 E-value=29 Score=23.71 Aligned_cols=12 Identities=33% Similarity=0.429 Sum_probs=10.0
Q ss_pred cCCccceeeech
Q psy1673 137 MSHQQPLVAYPC 148 (161)
Q Consensus 137 ~~~~r~LvaYP~ 148 (161)
-.+|+.+||||-
T Consensus 41 ~td~kv~VaYP~ 52 (72)
T PHA02737 41 ATDQKSIVAYFE 52 (72)
T ss_pred ccCceEEEEccC
Confidence 368999999994
No 13
>PTZ00459 mucin-associated surface protein (MASP); Provisional
Probab=22.24 E-value=51 Score=27.97 Aligned_cols=11 Identities=45% Similarity=1.075 Sum_probs=9.4
Q ss_pred HHHHHHHHHHH
Q psy1673 114 SLTILTVLWCA 124 (161)
Q Consensus 114 ~l~~~~v~Wst 124 (161)
.+..+||+||-
T Consensus 11 LVCALCVLWCg 21 (291)
T PTZ00459 11 LVCALCVLWCG 21 (291)
T ss_pred HHHHHHHHhcC
Confidence 45899999997
No 14
>PF15190 DUF4583: Domain of unknown function (DUF4583)
Probab=21.27 E-value=44 Score=25.14 Aligned_cols=12 Identities=33% Similarity=1.184 Sum_probs=9.9
Q ss_pred chhchHHHHHHH
Q psy1673 23 LGYCLLPMVVLA 34 (161)
Q Consensus 23 lGYcllPlvi~a 34 (161)
+|||.+|+++.-
T Consensus 96 vgycv~P~cl~~ 107 (128)
T PF15190_consen 96 VGYCVIPVCLAT 107 (128)
T ss_pred heeeeHHHHHHH
Confidence 699999998653
No 15
>PF06930 DUF1282: Protein of unknown function (DUF1282); InterPro: IPR009698 This entry represents several hypothetical proteins of around 200 residues in length. The function of is unknown although a number of the members are thought to be putative membrane proteins.
Probab=21.21 E-value=3.7e+02 Score=20.33 Aligned_cols=58 Identities=9% Similarity=0.071 Sum_probs=38.4
Q ss_pred cchhHhhhHHHHHHHHHHhhcccccccCChhHHHHHHHHHHHHHhhhHHHHHHhhccCCc
Q psy1673 81 YPCAILYSVFALITFVTMSTVLTPFVSRGAVGLSLTILTVLWCAMSASKLLVTCFAMSHQ 140 (161)
Q Consensus 81 YP~~L~y~~y~llpi~~~s~~~~~~~~~~~~~~~l~~~~v~Wst~sas~~f~~~~~~~~~ 140 (161)
|+-+.-..+|+..|++..+.++...+ .+.......++..|+-+=----.-...+.+||
T Consensus 96 ~~~~~~~a~y~~tPl~L~~i~~~~~~--~~l~~~~~~~~~~~~~~Lly~Gv~~~~~i~~~ 153 (170)
T PF06930_consen 96 YKKCLAFAAYAATPLFLGGIVNLYPS--LWLTLLVGLIALIYSVYLLYLGVPIFMNISEK 153 (170)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 77677777899999999888876643 44455556666677765544444444566443
Done!