RPS-BLAST 2.2.26 [Sep-21-2011]

Database: CDD.v3.10 
           44,354 sequences; 10,937,602 total letters

Searching..................................................done

Query= psy16731
         (282 letters)



>gnl|CDD|201070 pfam00191, Annexin, Annexin.  This family of annexins also includes
           giardin that has been shown to function as an annexin.
          Length = 66

 Score = 58.6 bits (143), Expect = 1e-11
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 205 ASLLYVAGEGRRGTEESLINKVMGHESYEQLKLVFREYKNQFGRTVEQSFRKELSGDLLR 264
           A LL  A     GT+E  + +++   S  QL+ +   YK  +G+ +E+  + E SGD  +
Sbjct: 3   AELLR-AAMKGLGTDEDTLIRILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEK 61

Query: 265 IHLAI 269
           + LA+
Sbjct: 62  LLLAL 66


>gnl|CDD|197661 smart00335, ANX, Annexin repeats. 
          Length = 53

 Score = 53.2 bits (129), Expect = 7e-10
 Identities = 16/53 (30%), Positives = 32/53 (60%)

Query: 217 GTEESLINKVMGHESYEQLKLVFREYKNQFGRTVEQSFRKELSGDLLRIHLAI 269
           GT+E  + +++   S  QL+ + + YK ++G+ +E   + E SGD  ++ LA+
Sbjct: 1   GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53


>gnl|CDD|172522 PRK14028, PRK14028, pyruvate ferredoxin oxidoreductase subunit
           gamma/delta; Provisional.
          Length = 312

 Score = 28.4 bits (63), Expect = 4.5
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)

Query: 225 KVMGHESYEQLKLVFREYKNQFGRTVEQSF 254
           KVMG  S E ++  F   + Q G+ VE++F
Sbjct: 145 KVMGFPSLESIRTAF---ETQLGKAVEENF 171


>gnl|CDD|147901 pfam05992, SbmA_BacA, SbmA/BacA-like family.  The Rhizobium
           meliloti bacA gene encodes a function that is essential
           for bacterial differentiation into bacteroids within
           plant cells in the symbiosis between R. meliloti and
           alfalfa. An Escherichia coli homolog of BacA, SbmA, is
           implicated in the uptake of microcins and bleomycin.
           This family is likely to be a subfamily of the ABC
           transporter family.
          Length = 315

 Score = 28.1 bits (63), Expect = 6.1
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 3/24 (12%)

Query: 235 LKLVFREYKNQFGRTVEQSFRKEL 258
           +KL   E+ NQ    VE ++RKEL
Sbjct: 184 IKLPGLEFNNQ---KVEAAYRKEL 204


>gnl|CDD|171443 PRK12369, PRK12369, putative transporter; Reviewed.
          Length = 326

 Score = 27.7 bits (62), Expect = 7.9
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 3/24 (12%)

Query: 235 LKLVFREYKNQFGRTVEQSFRKEL 258
           +KL   EY NQ    VE +FRKEL
Sbjct: 191 IKLPGLEYNNQ---KVEAAFRKEL 211


>gnl|CDD|215281 PLN02507, PLN02507, glutathione reductase.
          Length = 499

 Score = 27.5 bits (61), Expect = 9.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)

Query: 93  VITKNSTELIELNKMYMKSMAPIGITVLEGLGGLKPP 129
           ++ K + E++ LN +Y + +A  G+ + EG G +  P
Sbjct: 115 LLQKKTDEILRLNGIYKRLLANAGVKLYEGEGKIVGP 151


  Database: CDD.v3.10
    Posted date:  Mar 20, 2013  7:55 AM
  Number of letters in database: 10,937,602
  Number of sequences in database:  44,354
  
Lambda     K      H
   0.318    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0891    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 13,769,808
Number of extensions: 1280354
Number of successful extensions: 982
Number of sequences better than 10.0: 1
Number of HSP's gapped: 981
Number of HSP's successfully gapped: 15
Length of query: 282
Length of database: 10,937,602
Length adjustment: 96
Effective length of query: 186
Effective length of database: 6,679,618
Effective search space: 1242408948
Effective search space used: 1242408948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (25.8 bits)