Query psy16739
Match_columns 129
No_of_seqs 134 out of 1160
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 20:44:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16739.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16739hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3240|consensus 99.9 2.2E-26 4.8E-31 174.8 8.5 108 22-129 10-117 (218)
2 TIGR00560 pgsA CDP-diacylglyce 99.9 4.8E-22 1E-26 150.4 11.7 100 26-127 2-110 (182)
3 COG0558 PgsA Phosphatidylglyce 99.9 1.4E-21 3E-26 148.2 12.9 106 20-127 7-119 (192)
4 PLN02558 CDP-diacylglycerol-gl 99.9 1.3E-21 2.9E-26 150.3 11.4 87 23-109 7-106 (203)
5 PRK10832 phosphatidylglyceroph 99.9 3.9E-21 8.5E-26 145.5 11.7 85 25-109 3-92 (182)
6 PLN02794 cardiolipin synthase 99.9 3.9E-21 8.4E-26 156.3 11.9 99 22-120 139-240 (341)
7 PF01066 CDP-OH_P_transf: CDP- 99.8 6.3E-20 1.4E-24 125.9 10.8 73 25-97 2-76 (101)
8 KOG1617|consensus 99.8 3.3E-19 7.2E-24 138.1 6.6 105 22-126 65-174 (243)
9 KOG2877|consensus 99.6 8.6E-16 1.9E-20 126.9 9.3 117 4-128 37-171 (389)
10 PTZ00307 ethanolamine phosphot 99.6 1E-14 2.2E-19 122.4 9.9 111 17-128 53-179 (417)
11 PLN02359 ethanolaminephosphotr 99.6 2.9E-14 6.2E-19 118.8 12.4 117 12-128 28-162 (389)
12 COG1183 PssA Phosphatidylserin 99.5 2.2E-13 4.8E-18 106.8 10.1 81 22-102 6-87 (234)
13 TIGR00473 pssA CDP-diacylglyce 99.5 4.1E-13 9E-18 99.1 10.2 71 32-102 1-72 (151)
14 COG5050 EPT1 sn-1,2-diacylglyc 99.2 8.6E-11 1.9E-15 96.0 11.0 112 16-128 36-164 (384)
15 PLN03039 ethanolaminephosphotr 99.2 5.8E-11 1.3E-15 97.5 7.9 76 51-128 30-110 (337)
16 KOG3240|consensus 98.3 4.6E-06 1E-10 64.1 8.9 75 1-75 34-121 (218)
17 COG0558 PgsA Phosphatidylglyce 90.0 6.6 0.00014 29.4 13.3 28 4-31 40-67 (192)
18 PRK10832 phosphatidylglyceroph 86.0 13 0.00028 28.1 13.7 35 4-38 31-66 (182)
19 TIGR00560 pgsA CDP-diacylglyce 84.1 16 0.00034 27.5 14.2 36 3-38 31-67 (182)
20 PF01066 CDP-OH_P_transf: CDP- 77.0 3.2 7E-05 27.7 3.1 29 3-31 26-55 (101)
21 PLN02558 CDP-diacylglycerol-gl 71.5 4.9 0.00011 31.0 3.2 35 4-38 37-72 (203)
22 TIGR00473 pssA CDP-diacylglyce 67.0 6.7 0.00015 28.8 3.0 28 3-30 18-45 (151)
23 PLN02794 cardiolipin synthase 59.1 9.4 0.0002 31.9 2.8 35 4-38 167-202 (341)
24 TIGR02736 cbb3_Q_epsi cytochro 43.4 32 0.00069 21.4 2.7 20 110-129 6-25 (56)
25 PF15647 Tox-REase-3: Restrict 36.7 33 0.00072 23.9 2.3 30 64-93 11-42 (109)
26 PF13273 DUF4064: Protein of u 34.9 1.3E+02 0.0029 19.8 6.4 20 44-63 77-96 (100)
27 COG1183 PssA Phosphatidylserin 28.9 42 0.0009 26.5 2.0 68 2-74 32-116 (234)
28 KOG1580|consensus 25.8 1.1E+02 0.0023 25.0 3.8 49 31-79 273-326 (337)
No 1
>KOG3240|consensus
Probab=99.93 E-value=2.2e-26 Score=174.82 Aligned_cols=108 Identities=50% Similarity=0.762 Sum_probs=103.8
Q ss_pred HhhhhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHHHHH
Q psy16739 22 DGHAARYFNQSYGRIVLALISFYFMPTHYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCVTLS 101 (129)
Q Consensus 22 ~~~~~~PN~iT~~Ri~l~~~~~~~~~~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~~l~ 101 (129)
.-+.+.||.+.+.|++++++++++...++..+.+++.+++.+|++||+.||++||+|.+|+.||.+.||.+..++.+.+.
T Consensus 10 ~v~~~iPN~iGY~RI~laiisf~vm~~~p~~~~~lY~~S~lLDAfDG~aAR~~NQ~S~fGA~LDmvTDR~st~~LL~~L~ 89 (218)
T KOG3240|consen 10 SVFLYIPNLIGYMRIVLAILSFYVMSSNPTTFSVLYLLSSLLDAFDGWAARKLNQVSRFGAMLDMVTDRCSTACLLVFLC 89 (218)
T ss_pred ceEEEecchhhHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHhhhHHHHHHHhhhhhHHHHHHHHHHHhhhHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhHhhhcC
Q psy16739 102 TFYPKYQFLFQLSMAIDIACHWIYLHSN 129 (129)
Q Consensus 102 ~~~p~~~~~~~~~~~~~i~~~w~~~~~~ 129 (129)
..+|.+.+++.+...+|++|||.|||+|
T Consensus 90 ~~Yp~~l~~fqL~~~lDiaSHwlhm~st 117 (218)
T KOG3240|consen 90 QFYPPYLVFFQLSMALDIASHWLHMHST 117 (218)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999985
No 2
>TIGR00560 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
Probab=99.88 E-value=4.8e-22 Score=150.43 Aligned_cols=100 Identities=22% Similarity=0.325 Sum_probs=82.2
Q ss_pred hhhHHHHHHHHHHHHHHHH-Hh------cchHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHH
Q psy16739 26 ARYFNQSYGRIVLALISFY-FM------PTHYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCV 98 (129)
Q Consensus 26 ~~PN~iT~~Ri~l~~~~~~-~~------~~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~ 98 (129)
+.||.+|+.|+++.|+..+ +. +++...+..++.++++||++||++|||.||+|++|+.+||++||+.....++
T Consensus 2 ~ipN~lT~~Ri~l~p~~~~~~~~~~~~~~~~~~~a~~l~~~a~~tD~lDG~iAR~~~~~S~~G~~LDp~aDk~~~~~~~~ 81 (182)
T TIGR00560 2 NIPNWLTLFRIIALPIFILFFLENVLPIQVSPFIGALLFIFAAVTDWLDGYLARKWNQVSNFGKFLDPLADKVLVLAVLI 81 (182)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHHHHHhhHHHHHHHHH
Confidence 6899999999999988643 22 1245778899999999999999999999999999999999999999999998
Q ss_pred HHHh--hhhHHHHHHHHHHHHHHHHhhHhhh
Q psy16739 99 TLST--FYPKYQFLFQLSMAIDIACHWIYLH 127 (129)
Q Consensus 99 ~l~~--~~p~~~~~~~~~~~~~i~~~w~~~~ 127 (129)
++.. ..|.|.+.+++. .|+.-++.|.+
T Consensus 82 ~l~~~~~~p~w~~~li~~--Re~~i~~~r~~ 110 (182)
T TIGR00560 82 ILVYHGYVPAWFVIVIIA--REIVISGLRVL 110 (182)
T ss_pred HHHHhccchHHHHHHHHH--HHHHHHHHHHH
Confidence 8876 578887766554 45555666544
No 3
>COG0558 PgsA Phosphatidylglycerophosphate synthase [Lipid metabolism]
Probab=99.87 E-value=1.4e-21 Score=148.16 Aligned_cols=106 Identities=24% Similarity=0.337 Sum_probs=84.6
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHHH-H-Hhc--chHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHH
Q psy16739 20 AIDGHAARYFNQSYGRIVLALISF-Y-FMP--THYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMC 95 (129)
Q Consensus 20 ~~~~~~~~PN~iT~~Ri~l~~~~~-~-~~~--~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~ 95 (129)
......+.||++|+.|+.+.++.. + +.+ ..+..+.+++.+++++|++||++||+.||+|++|+++||++||+.+.+
T Consensus 7 ~~~~~~~~PN~lTl~r~~l~~~~~~~~~~~~~~~~~~~~~l~~~a~l~D~lDG~lAR~~~~~S~~G~~LDp~~Dk~~~~~ 86 (192)
T COG0558 7 ALLKLGNTPNQLTLLRIFLIPLFALLLLLPGLGLLLLALVLFLLAALTDALDGYLARKWGQVSRFGAFLDPVADKLLDAA 86 (192)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHhcCCCccchhcchhhHHHHHHH
Confidence 344678899999999977777653 3 333 357888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh---hHHHHHHHHHHHHHHHHhhHhhh
Q psy16739 96 LCVTLSTFY---PKYQFLFQLSMAIDIACHWIYLH 127 (129)
Q Consensus 96 ~~~~l~~~~---p~~~~~~~~~~~~~i~~~w~~~~ 127 (129)
.++++.... |.|...+ ....|+..+..|.+
T Consensus 87 ~l~~l~~~~~~~~~~~~~l--~l~r~~~vs~~r~~ 119 (192)
T COG0558 87 LLLGLVALGPVSPLWLAIL--ILAREILVSYLRAL 119 (192)
T ss_pred HHHHHHHhcccchHHHHHH--HHHHHHHHHHHHHH
Confidence 999998853 4454444 44566666666554
No 4
>PLN02558 CDP-diacylglycerol-glycerol-3-phosphate/ 3-phosphatidyltransferase
Probab=99.87 E-value=1.3e-21 Score=150.29 Aligned_cols=87 Identities=18% Similarity=0.185 Sum_probs=74.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHH-hcc---hHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHH
Q psy16739 23 GHAARYFNQSYGRIVLALISFYF-MPT---HYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCV 98 (129)
Q Consensus 23 ~~~~~PN~iT~~Ri~l~~~~~~~-~~~---~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~ 98 (129)
...+.||.+|+.|+++.|+..++ ..+ +...+..+++++++||++||++|||+||+|++|+.+||++||+.....+.
T Consensus 7 ~~~~lPN~LT~~RI~liP~~~~l~~~~~~~~~~~A~~lf~~a~lTD~lDG~lAR~~n~~T~~G~~lDPiaDKll~~~~~~ 86 (203)
T PLN02558 7 KVLTLPTVLTLGRVAAVPLLVATFYVDSWWGRTATTSIFIAAAITDWLDGYLARKMKLGTAFGAFLDPVADKLMVAAALI 86 (203)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHHhHHHHHHHHHHHHH
Confidence 34689999999999999987543 221 24678999999999999999999999999999999999999999999988
Q ss_pred HHHh---------hhhHHHH
Q psy16739 99 TLST---------FYPKYQF 109 (129)
Q Consensus 99 ~l~~---------~~p~~~~ 109 (129)
++.. ..|+|..
T Consensus 87 ~l~~~~~~~~~~~~~p~w~~ 106 (203)
T PLN02558 87 LLCSRPLEVAVLGEVPWLFT 106 (203)
T ss_pred HHHHhhhhhhhcCcccHHHH
Confidence 8752 4788865
No 5
>PRK10832 phosphatidylglycerophosphate synthetase; Provisional
Probab=99.86 E-value=3.9e-21 Score=145.53 Aligned_cols=85 Identities=25% Similarity=0.319 Sum_probs=70.3
Q ss_pred hhhhHHHHHHHHHHHHHHHH-Hh-c--chHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHHHH
Q psy16739 25 AARYFNQSYGRIVLALISFY-FM-P--THYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCVTL 100 (129)
Q Consensus 25 ~~~PN~iT~~Ri~l~~~~~~-~~-~--~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~~l 100 (129)
.+.||.+|+.|++++|+..+ +. + .++..+..++.++++||++||++|||.||+|++|+.+||++||+.....++.+
T Consensus 3 ~~ipN~lT~~Ri~l~P~~~~~~~~~~~~~~~~a~~lf~~a~~TD~lDG~iAR~~~~~S~lG~~LDPlADKll~~~~l~~l 82 (182)
T PRK10832 3 FNIPTLLTLFRVILIPFFVLVFYLPFTWAPFVCALIFCVAAVTDWFDGFLARRWNQSTRFGAFLDPVADKVMVAIAMVLV 82 (182)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHHhHHHHHHHHHHHHHHH
Confidence 47899999999999988743 22 2 23568899999999999999999999999999999999999999988777655
Q ss_pred Hh-hhhHHHH
Q psy16739 101 ST-FYPKYQF 109 (129)
Q Consensus 101 ~~-~~p~~~~ 109 (129)
.. ..|+|..
T Consensus 83 ~~~~~~~w~~ 92 (182)
T PRK10832 83 TEHYHSWWVT 92 (182)
T ss_pred HHccccHHHH
Confidence 44 3455654
No 6
>PLN02794 cardiolipin synthase
Probab=99.86 E-value=3.9e-21 Score=156.27 Aligned_cols=99 Identities=20% Similarity=0.211 Sum_probs=84.3
Q ss_pred HhhhhhhHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHHHH
Q psy16739 22 DGHAARYFNQSYGRIVLALISFY-FMPTHYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCVTL 100 (129)
Q Consensus 22 ~~~~~~PN~iT~~Ri~l~~~~~~-~~~~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~~l 100 (129)
+...+.||.+|+.|++++|+..+ +..+++..+.++++++++||++||++|||+|++|++|+++||++||+...+.++++
T Consensus 139 ~~i~nIPNlLTl~RIlLvP~~i~~~l~~~~~~A~~lfiiAglTD~LDGyIARk~n~vS~lGk~LDPLADKllv~svli~L 218 (341)
T PLN02794 139 KSFVNLPNLISISRLVSGPVIGWMIVNEMYLSAFVGLAISGASDWLDGYVARKMGINSVVGSYLDPLADKVLIGCVALAM 218 (341)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHcCCCChhHHHHhHHHHHHHHHHHHHHH
Confidence 45578999999999999998754 44455678899999999999999999999999999999999999999999888887
Q ss_pred Hh--hhhHHHHHHHHHHHHHHH
Q psy16739 101 ST--FYPKYQFLFQLSMAIDIA 120 (129)
Q Consensus 101 ~~--~~p~~~~~~~~~~~~~i~ 120 (129)
.. ..|.|...+++.+.+.+.
T Consensus 219 ~~~~~lp~wlv~lIi~RDi~I~ 240 (341)
T PLN02794 219 VEKDLLHPGLVGLVVLRDVALV 240 (341)
T ss_pred HHhccchHHHHHHHHHHHHHHH
Confidence 65 478888877777654444
No 7
>PF01066 CDP-OH_P_transf: CDP-alcohol phosphatidyltransferase; InterPro: IPR000462 A number of phosphatidyltransferases, which are all involved in phospholipid biosynthesis and that share the property of catalyzing the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond share a conserved sequence region [, ]. These enzymes are proteins of 200 to 400 amino acid residues. The conserved region contains three aspartic acid residues and is located in the N-terminal section of the sequences.; GO: 0016780 phosphotransferase activity, for other substituted phosphate groups, 0008654 phospholipid biosynthetic process, 0016020 membrane
Probab=99.83 E-value=6.3e-20 Score=125.90 Aligned_cols=73 Identities=29% Similarity=0.373 Sum_probs=66.3
Q ss_pred hhhhHHHHHHHHHHHHHHH-HHhcchH-HHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHH
Q psy16739 25 AARYFNQSYGRIVLALISF-YFMPTHY-AIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLC 97 (129)
Q Consensus 25 ~~~PN~iT~~Ri~l~~~~~-~~~~~~~-~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~ 97 (129)
...||.+|+.|+++++.+. .+..+++ ..+.+++.++.++|++||++||++|++|++|+++|+++|++......
T Consensus 2 ~~~pN~iT~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~DG~lAR~~~~~S~~G~~lD~~~D~i~~~~~~ 76 (101)
T PF01066_consen 2 WITPNAITLLRLLLGFLAALLLLQGRPLLLAALLLFLAFLLDGLDGWLARRRNQSSPFGAYLDSVADRISFVALP 76 (101)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHhHHhHHHHHHHHH
Confidence 3589999999999998874 4455666 89999999999999999999999999999999999999999999888
No 8
>KOG1617|consensus
Probab=99.78 E-value=3.3e-19 Score=138.10 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=87.0
Q ss_pred HhhhhhhHHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHHHH
Q psy16739 22 DGHAARYFNQSYGRIVLALISF-YFMPTHYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCVTL 100 (129)
Q Consensus 22 ~~~~~~PN~iT~~Ri~l~~~~~-~~~~~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~~l 100 (129)
+.-.+.||.+|+.|+..+|+.. ++..++...+..+|..+++||++||++||+.++.|.+|++|||++||+.+.++.+++
T Consensus 65 ~kv~tiPN~Ltl~Ri~a~Pli~~lii~~~~t~A~~~Fa~Ag~TD~lDGyIARk~~l~S~~Gs~LDPlADkvlit~~~l~m 144 (243)
T KOG1617|consen 65 SKVLTIPNMLTLARIAATPLIGYLIIDENFTAAFGLFAVAGITDLLDGYIARKMRLGSIAGSVLDPLADKVLITCLTLCM 144 (243)
T ss_pred ccccccchHHHHHHHhhhceeeEEEecccccHHHHHHHHHHhHHHHHHHHHhhccccchhhhccChHHHHHHHHHHHHHH
Confidence 3456899999999999999764 456777889999999999999999999999999999999999999999999999998
Q ss_pred Hh--hhhHHHHHHHHHHH--HHHHHhhHhh
Q psy16739 101 ST--FYPKYQFLFQLSMA--IDIACHWIYL 126 (129)
Q Consensus 101 ~~--~~p~~~~~~~~~~~--~~i~~~w~~~ 126 (129)
.. ..|.-+..+++.+. +-.+..|.+.
T Consensus 145 ~~~~liPvpL~~~IIgRDV~Lv~~~~y~ry 174 (243)
T KOG1617|consen 145 VYADLIPVPLASIIIGRDVLLVAGAFYLRY 174 (243)
T ss_pred HhhhccCcchhhhhhhhHHHHHHHHHHHHH
Confidence 77 57777666666543 3344445543
No 9
>KOG2877|consensus
Probab=99.64 E-value=8.6e-16 Score=126.87 Aligned_cols=117 Identities=22% Similarity=0.343 Sum_probs=90.5
Q ss_pred chhHHHHHHHHHHHHhHHHhhhhhhHHHHHHHHHHHHHHHH----Hhc-------ch-HHHHHHHHHHHHHHhHHHHHHh
Q psy16739 4 HYAIACWCYVISGLLDAIDGHAARYFNQSYGRIVLALISFY----FMP-------TH-YAIACWCYVISGLLDAIDGHAA 71 (129)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~PN~iT~~Ri~l~~~~~~----~~~-------~~-~~~a~~l~~l~~~~D~lDG~lA 71 (129)
||+|.-. +..++.|. .||+||+..+.......+ +.+ .+ +..+.++.++...+|.+||+.|
T Consensus 37 ~pfW~~~-------v~~~P~wm-APNlITL~Gl~~~v~~~Ll~~~ydP~~~~~~P~W~y~a~alglFlYqTlDaiDGkQA 108 (389)
T KOG2877|consen 37 QPFWNWL-------VKVFPLWM-APNLITLIGLIFNVITVLLLLYYDPNLDEPAPRWTYFAAALGLFLYQTLDAIDGKQA 108 (389)
T ss_pred hHHHHHH-------HHHccccc-CchHHHHHHHHHHHHHHHHHHhcCcccCCCCCcHHHHHHHHHHHHHHhcccccchhh
Confidence 5666543 48888898 689999999988766422 221 12 2345777889999999999999
Q ss_pred hhCCCCCCcccchhhhhHHHHHHHHHHHHHh-----hhhHHHHHHHHH-HHHHHHHhhHhhhc
Q psy16739 72 RYFNQSTKFGAMLDQLTDRVGTMCLCVTLST-----FYPKYQFLFQLS-MAIDIACHWIYLHS 128 (129)
Q Consensus 72 R~~~~~S~~G~~LD~~~D~i~~~~~~~~l~~-----~~p~~~~~~~~~-~~~~i~~~w~~~~~ 128 (129)
||.|++||+|+.+|+-+|.+......+.... ..|.|.+...+. ...++.+||.+.++
T Consensus 109 RRTnsSsPLGELFDHG~DS~stvf~~l~~~s~~~~G~~~~~~~~~~~~~~~~FY~ahWe~Y~T 171 (389)
T KOG2877|consen 109 RRTNSSSPLGELFDHGCDSISTVFVTLAVCSAFGLGTSPYWLFLFQFASLVLFYLAHWEEYHT 171 (389)
T ss_pred ccCCCCCCcHhhhcccchhHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHcchhheec
Confidence 9999999999999999999987777666654 256666655555 55999999999886
No 10
>PTZ00307 ethanolamine phosphotransferase; Provisional
Probab=99.58 E-value=1e-14 Score=122.37 Aligned_cols=111 Identities=17% Similarity=0.213 Sum_probs=81.3
Q ss_pred HHhHHHhhhhhhHHHHHHHHHHHHHHHH----Hh---cc----h-HHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccch
Q psy16739 17 LLDAIDGHAARYFNQSYGRIVLALISFY----FM---PT----H-YAIACWCYVISGLLDAIDGHAARYFNQSTKFGAML 84 (129)
Q Consensus 17 ~~~~~~~~~~~PN~iT~~Ri~l~~~~~~----~~---~~----~-~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~L 84 (129)
+++.+..|. .||.+|+..+........ +. .+ + ...+.++..+.+..|.+||+.|||.|++||+|+.+
T Consensus 53 ~v~~~P~~l-aPN~ITl~G~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~a~~lfly~~~D~lDGkqARrt~~sSplGelf 131 (417)
T PTZ00307 53 IVNLVPMTV-APNCITFTGFLIGMSSAALLLYFYFFEEGVYPSWVLYYAAFALFAYQTLDAIDGKQARRTGTGSPLGELF 131 (417)
T ss_pred HHHHccCCC-CCCeeeHHhHHHHHHHHHHHHHhcccccCCCccHHHHHHHHHHHHHHHHhhcchHHhhhcCCCCCchhHH
Confidence 446667666 699999999987665421 11 11 1 23567788899999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHh--hhhHHHH--HHHHHHHHHHHHhhHhhhc
Q psy16739 85 DQLTDRVGTMCLCVTLST--FYPKYQF--LFQLSMAIDIACHWIYLHS 128 (129)
Q Consensus 85 D~~~D~i~~~~~~~~l~~--~~p~~~~--~~~~~~~~~i~~~w~~~~~ 128 (129)
|+.+|++......+.+.. ..+.+.. ........++.+||.++|+
T Consensus 132 Dhg~D~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~fy~~~Weey~T 179 (417)
T PTZ00307 132 DHGCDAFLTPFVLLNVSLATYMTPVERFWLSTISSMSLFTAIWEQFST 179 (417)
T ss_pred HhhhhHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999988777666654 2333322 2222234789999999986
No 11
>PLN02359 ethanolaminephosphotransferase
Probab=99.58 E-value=2.9e-14 Score=118.84 Aligned_cols=117 Identities=16% Similarity=0.200 Sum_probs=81.9
Q ss_pred HHHHHHHhHHHhh---hhhhHHHHHHHHHHHHHHHH---Hh-c-------ch-HHHHHHHHHHHHHHhHHHHHHhhhCCC
Q psy16739 12 YVISGLLDAIDGH---AARYFNQSYGRIVLALISFY---FM-P-------TH-YAIACWCYVISGLLDAIDGHAARYFNQ 76 (129)
Q Consensus 12 ~~~~~~~~~~~~~---~~~PN~iT~~Ri~l~~~~~~---~~-~-------~~-~~~a~~l~~l~~~~D~lDG~lAR~~~~ 76 (129)
|++.-.-+++... ...||.+|+........... .. + ++ ...+.++..+.+..|.+||+.|||.|+
T Consensus 28 ~vl~p~w~~~v~~~P~~~aPN~iTl~G~~~~~~~~~~~~~~~p~~~~~~P~w~~~~~a~~lfly~~~D~~DGkqARrt~~ 107 (389)
T PLN02359 28 YVLQPFWSRFVNFFPLWMPPNMITLMGFMFLLTSALLGYIYSPHLDTPPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNS 107 (389)
T ss_pred HHhHHHHHHHHHhCcCCCCCCchHHHHHHHHHHHHHHHHHhCcccccCCccHHHHHHHHHHHHHHHHHhccHHHHhhcCC
Confidence 4444444444443 45799999999998876422 11 1 11 245678889999999999999999999
Q ss_pred CCCcccchhhhhHHHHHHHHHHHHHh--hhhHHHHH-HHHHHHHHHHHhhHhhhc
Q psy16739 77 STKFGAMLDQLTDRVGTMCLCVTLST--FYPKYQFL-FQLSMAIDIACHWIYLHS 128 (129)
Q Consensus 77 ~S~~G~~LD~~~D~i~~~~~~~~l~~--~~p~~~~~-~~~~~~~~i~~~w~~~~~ 128 (129)
+||+|+.+|+.+|++......+.+.. ..+..... ......-++.+||.+.|+
T Consensus 108 ssplGelfDHg~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Fy~~~We~y~T 162 (389)
T PLN02359 108 SSPLGELFDHGCDALACAFETMAFGSTAMCGRDTFWFWVISAVPFYGATWEHFFT 162 (389)
T ss_pred CCCchhHHhhhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987766555543 22222222 222245689999999886
No 12
>COG1183 PssA Phosphatidylserine synthase [Lipid metabolism]
Probab=99.49 E-value=2.2e-13 Score=106.80 Aligned_cols=81 Identities=25% Similarity=0.230 Sum_probs=73.5
Q ss_pred HhhhhhhHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHHHH
Q psy16739 22 DGHAARYFNQSYGRIVLALISFY-FMPTHYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCVTL 100 (129)
Q Consensus 22 ~~~~~~PN~iT~~Ri~l~~~~~~-~~~~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~~l 100 (129)
.+-...||.+|...+.++..++. ..++++..+..+..++.+.|.+||++||++|.+|++|+++|+++|-++++.....+
T Consensus 6 ~~~~~~pn~iT~~~~~~G~~sI~~a~~~~~~~a~~~i~lA~i~DglDG~VAR~~~~~s~~G~~lDSLaD~VsFgVaPA~l 85 (234)
T COG1183 6 KRLYLLPNLITALGLFLGLLSIVAALEGRFEAALLLILLALILDGLDGRVARKLNAKSAFGAELDSLADLVSFGVAPALL 85 (234)
T ss_pred hhHHHhhhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccchHHHHhcCCcchHHHHHhHHHHHHHhhHHHHHH
Confidence 34567899999999999999865 46677889999999999999999999999999999999999999999999998888
Q ss_pred Hh
Q psy16739 101 ST 102 (129)
Q Consensus 101 ~~ 102 (129)
.+
T Consensus 86 ~y 87 (234)
T COG1183 86 LY 87 (234)
T ss_pred HH
Confidence 76
No 13
>TIGR00473 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase. This enzyme, CDP-diacylglycerol--serine O-phosphatidyltransferase, is involved in phospholipid biosynthesis catalyzing the reaction CDP-diacylglycerol + L-serine = CMP + L-1-phosphatidylserine. Members of this family do not bear any significant sequence similarity to the corresponding E.coli protein.
Probab=99.48 E-value=4.1e-13 Score=99.05 Aligned_cols=71 Identities=25% Similarity=0.356 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHH-HhcchHHHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHHHHHh
Q psy16739 32 SYGRIVLALISFY-FMPTHYAIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCVTLST 102 (129)
Q Consensus 32 T~~Ri~l~~~~~~-~~~~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~~l~~ 102 (129)
|..+++.+..+.. ..+++...+.+++.++.++|.+||++||+.|++|++|+++|+++|++++......+.+
T Consensus 1 T~~n~~~g~~ai~~~~~~~~~~a~~~l~~a~~~D~~DG~vAR~~~~~s~~G~~lDsl~D~vsfgvaPa~l~~ 72 (151)
T TIGR00473 1 TMLNAFSGFLSILSLLRYTIVRACFLILLSMFFDFLDGRVARKTNRVSDFGKELDSLADVVSFGVAPAALAY 72 (151)
T ss_pred ChHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777877654 4567788899999999999999999999999999999999999999999988777765
No 14
>COG5050 EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases [Lipid metabolism]
Probab=99.24 E-value=8.6e-11 Score=96.03 Aligned_cols=112 Identities=16% Similarity=0.187 Sum_probs=79.5
Q ss_pred HHHhHHHhhhhhhHHHHHHHHHHHHHHH---HHh-c-----c--hH-HHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccc
Q psy16739 16 GLLDAIDGHAARYFNQSYGRIVLALISF---YFM-P-----T--HY-AIACWCYVISGLLDAIDGHAARYFNQSTKFGAM 83 (129)
Q Consensus 16 ~~~~~~~~~~~~PN~iT~~Ri~l~~~~~---~~~-~-----~--~~-~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~ 83 (129)
.++..++-|. .||++|+..++...+-+ +.+ + + .. ..-.++.++....|.+||..|||.|++||+|+.
T Consensus 36 ~ll~viP~~m-APNliTL~Gl~fiv~nvlt~l~ydp~~~~~~~~w~yfs~alg~FlYqtfD~lDG~qARRTGt~spLGeL 114 (384)
T COG5050 36 PLLRVIPYWM-APNLITLCGLIFIVANVLTTLYYDPCLSVDGPRWTYFSYALGLFLYQTFDALDGRQARRTGTGSPLGEL 114 (384)
T ss_pred HHHHHccccc-CchHHHHHHHHHHHHHHHHHHhcccccCCCcchhHHHHHHHHHHHHhhccccccHhhhcCCCCCCcHHH
Confidence 5677888887 68999999877664422 221 1 1 11 122556678899999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHh----hhhHHHHHHHH-HHHHHHHHhhHhhhc
Q psy16739 84 LDQLTDRVGTMCLCVTLST----FYPKYQFLFQL-SMAIDIACHWIYLHS 128 (129)
Q Consensus 84 LD~~~D~i~~~~~~~~l~~----~~p~~~~~~~~-~~~~~i~~~w~~~~~ 128 (129)
+|+-.|.+-.......+.. ..|--.....+ ....++.+.|.+.|+
T Consensus 115 FDH~vDsint~l~~i~~~s~~g~g~s~~~i~~qfA~l~~FYlstwEEyhT 164 (384)
T COG5050 115 FDHGVDSINTTLSAIIFVSAFGMGESFLLILSQFAPLFVFYLSTWEEYHT 164 (384)
T ss_pred HhhhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999876665555543 24322333333 345889999999987
No 15
>PLN03039 ethanolaminephosphotransferase; Provisional
Probab=99.19 E-value=5.8e-11 Score=97.52 Aligned_cols=76 Identities=17% Similarity=0.244 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHhhhCCCCCCcccchhhhhHHHHHHHHHHHHHh--h---hhHHHHHHHHHHHHHHHHhhHh
Q psy16739 51 AIACWCYVISGLLDAIDGHAARYFNQSTKFGAMLDQLTDRVGTMCLCVTLST--F---YPKYQFLFQLSMAIDIACHWIY 125 (129)
Q Consensus 51 ~~a~~l~~l~~~~D~lDG~lAR~~~~~S~~G~~LD~~~D~i~~~~~~~~l~~--~---~p~~~~~~~~~~~~~i~~~w~~ 125 (129)
....+...+...+|.+||+.|||.|++||+|+.+|+-+|.+......+.... . .+.|. .+....-++.+||.+
T Consensus 30 ~~~a~~lf~YqtlD~~DGkqARRt~~sspLGelfDHg~Ds~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~fy~~~We~ 107 (337)
T PLN03039 30 FAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFEAMAFGSTAMCGRDTFWF--WVISAIPFFGATWEH 107 (337)
T ss_pred HHHHHHHHHHHHHhhcchhhhcccCCCCCchHhHhcchhHHHHHHHHHHHHHHhccCchHHHH--HHHHHHHHHHHHHHH
Confidence 4567788899999999999999999999999999999999977666554432 1 22222 223345689999999
Q ss_pred hhc
Q psy16739 126 LHS 128 (129)
Q Consensus 126 ~~~ 128 (129)
.|+
T Consensus 108 y~t 110 (337)
T PLN03039 108 YFT 110 (337)
T ss_pred hee
Confidence 876
No 16
>KOG3240|consensus
Probab=98.32 E-value=4.6e-06 Score=64.15 Aligned_cols=75 Identities=24% Similarity=0.205 Sum_probs=55.8
Q ss_pred CCCchhHHHHHHHHHHHHhHHHhhhhhh-HHHHHH---------HHHHHHHHH---HHhcchHHHHHHHHHHHHHHhHHH
Q psy16739 1 MPTHYAIACWCYVISGLLDAIDGHAARY-FNQSYG---------RIVLALISF---YFMPTHYAIACWCYVISGLLDAID 67 (129)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P-N~iT~~---------Ri~l~~~~~---~~~~~~~~~a~~l~~l~~~~D~lD 67 (129)
|++||-..+|||.+|+++|++|||.+|. |+.|-+ |...+.+.. .+++++.....+...+...+.|+.
T Consensus 34 m~~~p~~~~~lY~~S~lLDAfDG~aAR~~NQ~S~fGA~LDmvTDR~st~~LL~~L~~~Yp~~l~~fqL~~~lDiaSHwlh 113 (218)
T KOG3240|consen 34 MSSNPTTFSVLYLLSSLLDAFDGWAARKLNQVSRFGAMLDMVTDRCSTACLLVFLCQFYPPYLVFFQLSMALDIASHWLH 113 (218)
T ss_pred hccCccHHHHHHHHHHHHHhhhHHHHHHHhhhhhHHHHHHHHHHHhhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999886 666655 433343332 245666666666677778888888
Q ss_pred HHHhhhCC
Q psy16739 68 GHAARYFN 75 (129)
Q Consensus 68 G~lAR~~~ 75 (129)
-+.+-..|
T Consensus 114 m~st~l~G 121 (218)
T KOG3240|consen 114 MHSTVLVG 121 (218)
T ss_pred HHHHHHhc
Confidence 77765554
No 17
>COG0558 PgsA Phosphatidylglycerophosphate synthase [Lipid metabolism]
Probab=89.99 E-value=6.6 Score=29.43 Aligned_cols=28 Identities=32% Similarity=0.477 Sum_probs=25.3
Q ss_pred chhHHHHHHHHHHHHhHHHhhhhhhHHH
Q psy16739 4 HYAIACWCYVISGLLDAIDGHAARYFNQ 31 (129)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~PN~i 31 (129)
+|.++.++|.+|.++|++||..+|-..+
T Consensus 40 ~~~~~~~l~~~a~l~D~lDG~lAR~~~~ 67 (192)
T COG0558 40 LLLLALVLFLLAALTDALDGYLARKWGQ 67 (192)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhcC
Confidence 6789999999999999999999987664
No 18
>PRK10832 phosphatidylglycerophosphate synthetase; Provisional
Probab=85.97 E-value=13 Score=28.12 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=28.9
Q ss_pred chhHHHHHHHHHHHHhHHHhhhhhh-HHHHHHHHHH
Q psy16739 4 HYAIACWCYVISGLLDAIDGHAARY-FNQSYGRIVL 38 (129)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~P-N~iT~~Ri~l 38 (129)
||.+|.++|+++++-|++||+.+|- |+.|-..-.+
T Consensus 31 ~~~~a~~lf~~a~~TD~lDG~iAR~~~~~S~lG~~L 66 (182)
T PRK10832 31 APFVCALIFCVAAVTDWFDGFLARRWNQSTRFGAFL 66 (182)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHH
Confidence 5679999999999999999999996 6667664433
No 19
>TIGR00560 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
Probab=84.07 E-value=16 Score=27.54 Aligned_cols=36 Identities=22% Similarity=0.169 Sum_probs=29.4
Q ss_pred CchhHHHHHHHHHHHHhHHHhhhhhh-HHHHHHHHHH
Q psy16739 3 THYAIACWCYVISGLLDAIDGHAARY-FNQSYGRIVL 38 (129)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~P-N~iT~~Ri~l 38 (129)
.++.++..+|+++++.|.+||+.+|- |+.|-..-.+
T Consensus 31 ~~~~~a~~l~~~a~~tD~lDG~iAR~~~~~S~~G~~L 67 (182)
T TIGR00560 31 VSPFIGALLFIFAAVTDWLDGYLARKWNQVSNFGKFL 67 (182)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHH
Confidence 35688999999999999999999996 7777664443
No 20
>PF01066 CDP-OH_P_transf: CDP-alcohol phosphatidyltransferase; InterPro: IPR000462 A number of phosphatidyltransferases, which are all involved in phospholipid biosynthesis and that share the property of catalyzing the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond share a conserved sequence region [, ]. These enzymes are proteins of 200 to 400 amino acid residues. The conserved region contains three aspartic acid residues and is located in the N-terminal section of the sequences.; GO: 0016780 phosphotransferase activity, for other substituted phosphate groups, 0008654 phospholipid biosynthetic process, 0016020 membrane
Probab=77.05 E-value=3.2 Score=27.75 Aligned_cols=29 Identities=34% Similarity=0.362 Sum_probs=25.0
Q ss_pred Cch-hHHHHHHHHHHHHhHHHhhhhhhHHH
Q psy16739 3 THY-AIACWCYVISGLLDAIDGHAARYFNQ 31 (129)
Q Consensus 3 ~~~-~~~~~~~~~~~~~~~~~~~~~~PN~i 31 (129)
.+| ..+.+++.++.++|.+||+.+|-...
T Consensus 26 ~~~~~~~~~l~~~~~~~D~~DG~lAR~~~~ 55 (101)
T PF01066_consen 26 GRPLLLAALLLFLAFLLDGLDGWLARRRNQ 55 (101)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 456 78999999999999999999986654
No 21
>PLN02558 CDP-diacylglycerol-glycerol-3-phosphate/ 3-phosphatidyltransferase
Probab=71.47 E-value=4.9 Score=31.02 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=28.8
Q ss_pred chhHHHHHHHHHHHHhHHHhhhhhh-HHHHHHHHHH
Q psy16739 4 HYAIACWCYVISGLLDAIDGHAARY-FNQSYGRIVL 38 (129)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~P-N~iT~~Ri~l 38 (129)
|+.+|.++|+++.+-|++||+.+|- |+.|-..-.+
T Consensus 37 ~~~~A~~lf~~a~lTD~lDG~lAR~~n~~T~~G~~l 72 (203)
T PLN02558 37 GRTATTSIFIAAAITDWLDGYLARKMKLGTAFGAFL 72 (203)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHcCCCChHHHHH
Confidence 3567999999999999999999987 7777764333
No 22
>TIGR00473 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase. This enzyme, CDP-diacylglycerol--serine O-phosphatidyltransferase, is involved in phospholipid biosynthesis catalyzing the reaction CDP-diacylglycerol + L-serine = CMP + L-1-phosphatidylserine. Members of this family do not bear any significant sequence similarity to the corresponding E.coli protein.
Probab=67.05 E-value=6.7 Score=28.79 Aligned_cols=28 Identities=32% Similarity=0.491 Sum_probs=24.9
Q ss_pred CchhHHHHHHHHHHHHhHHHhhhhhhHH
Q psy16739 3 THYAIACWCYVISGLLDAIDGHAARYFN 30 (129)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~PN~ 30 (129)
.|+.++.++..++.++|.+||..+|-..
T Consensus 18 ~~~~~a~~~l~~a~~~D~~DG~vAR~~~ 45 (151)
T TIGR00473 18 YTIVRACFLILLSMFFDFLDGRVARKTN 45 (151)
T ss_pred CcHHHHHHHHHHHHHHHHhhHHHHHHcC
Confidence 4678999999999999999999999654
No 23
>PLN02794 cardiolipin synthase
Probab=59.08 E-value=9.4 Score=31.88 Aligned_cols=35 Identities=34% Similarity=0.181 Sum_probs=28.4
Q ss_pred chhHHHHHHHHHHHHhHHHhhhhhh-HHHHHHHHHH
Q psy16739 4 HYAIACWCYVISGLLDAIDGHAARY-FNQSYGRIVL 38 (129)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~P-N~iT~~Ri~l 38 (129)
|+.+|.++|+++++-|.+||+.+|- |+.|-..-.+
T Consensus 167 ~~~~A~~lfiiAglTD~LDGyIARk~n~vS~lGk~L 202 (341)
T PLN02794 167 MYLSAFVGLAISGASDWLDGYVARKMGINSVVGSYL 202 (341)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHcCCCChhHHHH
Confidence 5678999999999999999999996 6666664333
No 24
>TIGR02736 cbb3_Q_epsi cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial. Members of this protein family are restricted to the epsilon branch of the Proteobacteria. All members are found in operons containing the other three structural subunits of the cbb3 type of cytochrome c oxidase. These small proteins show remote sequence similarity to the CcoQ subunit in other cytochrome c oxidase systems, so this family is assumed to represent the epsilonproteobacterial variant of CcoQ.
Probab=43.44 E-value=32 Score=21.40 Aligned_cols=20 Identities=20% Similarity=0.115 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHhhHhhhcC
Q psy16739 110 LFQLSMAIDIACHWIYLHSN 129 (129)
Q Consensus 110 ~~~~~~~~~i~~~w~~~~~~ 129 (129)
++.++.++...+.|.|+|+|
T Consensus 6 ~~ti~lvv~LYgY~yhLYrs 25 (56)
T TIGR02736 6 AFTLLLVIFLYAYIYHLYRS 25 (56)
T ss_pred HHHHHHHHHHHHHHHHhhhh
Confidence 34444567788999999975
No 25
>PF15647 Tox-REase-3: Restriction endonuclease fold toxin 3
Probab=36.72 E-value=33 Score=23.92 Aligned_cols=30 Identities=20% Similarity=0.314 Sum_probs=22.9
Q ss_pred hHHHHHHhhhCCCCCC--cccchhhhhHHHHH
Q psy16739 64 DAIDGHAARYFNQSTK--FGAMLDQLTDRVGT 93 (129)
Q Consensus 64 D~lDG~lAR~~~~~S~--~G~~LD~~~D~i~~ 93 (129)
|...-.+||+++-+|+ +|+.+|.+.|....
T Consensus 11 ~~yed~lr~k~gG~S~~~~~RE~D~Vtd~~i~ 42 (109)
T PF15647_consen 11 DHYEDLLREKLGGQSRIKFGREFDVVTDQYIA 42 (109)
T ss_pred hHHHHHHHHHhCCchhhhcccchhhhhHHHHH
Confidence 3445578999986654 89999999998653
No 26
>PF13273 DUF4064: Protein of unknown function (DUF4064)
Probab=34.91 E-value=1.3e+02 Score=19.76 Aligned_cols=20 Identities=10% Similarity=0.340 Sum_probs=12.8
Q ss_pred HHhcchHHHHHHHHHHHHHH
Q psy16739 44 YFMPTHYAIACWCYVISGLL 63 (129)
Q Consensus 44 ~~~~~~~~~a~~l~~l~~~~ 63 (129)
+....++..+.++++++++.
T Consensus 77 i~ikk~~k~~Gil~Ii~aii 96 (100)
T PF13273_consen 77 ILIKKNPKLAGILFIIAAII 96 (100)
T ss_pred HHHcCCchhhhhhhhHHHHH
Confidence 34445667777777777664
No 27
>COG1183 PssA Phosphatidylserine synthase [Lipid metabolism]
Probab=28.90 E-value=42 Score=26.51 Aligned_cols=68 Identities=24% Similarity=0.329 Sum_probs=48.5
Q ss_pred CCchhHHHHHHHHHHHHhHHHhhhhhhHH------------HHHHHHHHHHHHHHH----hcch-HHHHHHHHHHHHHHh
Q psy16739 2 PTHYAIACWCYVISGLLDAIDGHAARYFN------------QSYGRIVLALISFYF----MPTH-YAIACWCYVISGLLD 64 (129)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~PN~------------iT~~Ri~l~~~~~~~----~~~~-~~~a~~l~~l~~~~D 64 (129)
.++|.-|+++-.++.++|.+||.-+|--. ..+.....+|..+.+ .++. -+++..++.+++.+
T Consensus 32 ~~~~~~a~~~i~lA~i~DglDG~VAR~~~~~s~~G~~lDSLaD~VsFgVaPA~l~y~~~~~~~~~~~~~a~~~~~~~al- 110 (234)
T COG1183 32 EGRFEAALLLILLALILDGLDGRVARKLNAKSAFGAELDSLADLVSFGVAPALLLYSSGLNTGPLGLLAALLYVLCGAL- 110 (234)
T ss_pred hcCHHHHHHHHHHHHHHcccchHHHHhcCCcchHHHHHhHHHHHHHhhHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH-
Confidence 45788899999999999999999887533 344566677776443 1222 35677788888887
Q ss_pred HHHHHHhhhC
Q psy16739 65 AIDGHAARYF 74 (129)
Q Consensus 65 ~lDG~lAR~~ 74 (129)
.+||-.
T Consensus 111 ----RLArFN 116 (234)
T COG1183 111 ----RLARFN 116 (234)
T ss_pred ----HHHHcc
Confidence 677755
No 28
>KOG1580|consensus
Probab=25.84 E-value=1.1e+02 Score=25.02 Aligned_cols=49 Identities=12% Similarity=0.112 Sum_probs=33.4
Q ss_pred HHHHHHHHHHH-HHHHh----cchHHHHHHHHHHHHHHhHHHHHHhhhCCCCCC
Q psy16739 31 QSYGRIVLALI-SFYFM----PTHYAIACWCYVISGLLDAIDGHAARYFNQSTK 79 (129)
Q Consensus 31 iT~~Ri~l~~~-~~~~~----~~~~~~a~~l~~l~~~~D~lDG~lAR~~~~~S~ 79 (129)
+|-.|=...++ +..++ .+..+++..+.+.+...|.+||+-|.+.....|
T Consensus 273 vTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~~t~akkp 326 (337)
T KOG1580|consen 273 VTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAPMTAAKKP 326 (337)
T ss_pred EeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCccccccCC
Confidence 44456555544 34333 245688888889999999999998877654443
Done!