AmiGO: BLAST Results


BLAST match view associations BLAST with PSPPH_4352 PSPPH_4352 PSPPH_4352 Histone deacetylase family protein	protein from Pseudomonas syringae pv. phaseolicola 1448A	6.5e-23
BLAST match view associations BLAST with PFL_5403 PFL_5403 PFL_5403 Histone deacetylase family protein	protein from Pseudomonas protegens Pf-5	6.8e-23
BLAST match view associations BLAST with CPS_3373 CPS_3373 CPS_3373 Histone deacetylase family protein	protein from Colwellia psychrerythraea 34H	6.8e-14
BLAST match view associations BLAST with CPS_3373 CPS_3373 CPS_3373 histone deacetylase family protein	protein from Colwellia psychrerythraea 34H	6.8e-14
BLAST match view associations BLAST with SO_1815 SO_1815 SO_1815 Histone deacetylase superfamily protein	protein from Shewanella oneidensis MR-1	7.0e-14
BLAST match view associations BLAST with SO_1815 SO_1815 SO_1815 histone deacetylase/AcuC/AphA family protein	protein from Shewanella oneidensis MR-1	7.0e-14
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Uncharacterized protein	protein from Gallus gallus	6.0e-08
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	1.0e-07
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Macaca fascicularis	1.0e-07
BLAST match view associations BLAST with Hdac11 Hdac11 Hdac11 histone deacetylase 11	protein from Mus musculus	1.4e-07
BLAST match view associations BLAST with Hdac11 Hdac11 Hdac11 histone deacetylase 11	gene from Rattus norvegicus	1.4e-07
BLAST match view associations BLAST with VC_2042 VC_2042 VC_2042 Histone deacetylase/AcuC/AphA family protein	protein from Vibrio cholerae O1 biovar El Tor str. N16961	3.9e-07
BLAST match view associations BLAST with VC_2042 VC_2042 VC_2042 histone deacetylase/AcuC/AphA family protein	protein from Vibrio cholerae O1 biovar El Tor	3.9e-07
BLAST match view associations BLAST with F1SPG6 F1SPG6 F1SPG6 Uncharacterized protein	protein from Sus scrofa	5.2e-07
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	1.4e-06
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	1.8e-06
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Uncharacterized protein	protein from Bos taurus	4.1e-06
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	5.1e-06
BLAST match view associations BLAST with LOC100738481 LOC100738481 LOC100738481 Uncharacterized protein	protein from Sus scrofa	5.5e-06
BLAST match view associations BLAST with hdac11 hdac11 hdac11 histone deacetylase 11	gene_product from Danio rerio	9.4e-06
BLAST match view associations BLAST with hda-10 hda-10 hda-10	gene from Caenorhabditis elegans	1.1e-05
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-05
BLAST match view associations BLAST with hdac6 hdac6 hdac6 histone deacetylase 6	gene_product from Danio rerio	1.9e-05
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Histone deacetylase 6	protein from Caenorhabditis elegans	3.0e-05
BLAST match view associations BLAST with hda-6 hda-6 hda-6	gene from Caenorhabditis elegans	3.1e-05
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Protein HDA-6, isoform c	protein from Caenorhabditis elegans	3.1e-05
BLAST match view associations BLAST with HDA2 HDA2 HDA2 AT5G26040	protein from Arabidopsis thaliana	8.6e-05
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	8.9e-05
BLAST match view associations BLAST with LOC100626511 LOC100626511 LOC100626511 Uncharacterized protein	protein from Sus scrofa	0.00017
BLAST match view associations BLAST with Hdac6 Hdac6 Hdac6 histone deacetylase 6	protein from Mus musculus	0.00017
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	0.00021
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6	protein from Drosophila melanogaster	0.00029
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	0.00039
BLAST match view associations BLAST with CPS_1655 CPS_1655 CPS_1655 Histone deacetylase family protein	protein from Colwellia psychrerythraea 34H	0.00082
BLAST match view associations BLAST with CPS_1655 CPS_1655 CPS_1655 histone deacetylase family protein	protein from Colwellia psychrerythraea 34H	0.00082
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	0.00093
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy16742
        (620 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q48DS3 - symbol:PSPPH_4352 "Histone deacetylase...   158  6.5e-23   3
UNIPROTKB|Q4K5L2 - symbol:PFL_5403 "Histone deacetylase f...   149  6.8e-23   3
UNIPROTKB|Q47YS1 - symbol:CPS_3373 "Histone deacetylase f...   126  6.8e-14   3
TIGR_CMR|CPS_3373 - symbol:CPS_3373 "histone deacetylase ...   126  6.8e-14   3
UNIPROTKB|Q8EFZ9 - symbol:SO_1815 "Histone deacetylase su...   134  7.0e-14   2
TIGR_CMR|SO_1815 - symbol:SO_1815 "histone deacetylase/Ac...   134  7.0e-14   2
UNIPROTKB|F1NYW6 - symbol:HDAC11 "Uncharacterized protein...    94  6.0e-08   3
UNIPROTKB|Q96DB2 - symbol:HDAC11 "Histone deacetylase 11"...    95  1.0e-07   3
UNIPROTKB|Q9GKU5 - symbol:HDAC11 "Histone deacetylase 11"...    95  1.0e-07   3
MGI|MGI:2385252 - symbol:Hdac11 "histone deacetylase 11" ...    93  1.4e-07   3
RGD|1311706 - symbol:Hdac11 "histone deacetylase 11" spec...    93  1.4e-07   3
UNIPROTKB|Q9KQF6 - symbol:VC_2042 "Histone deacetylase/Ac...   123  3.9e-07   2
TIGR_CMR|VC_2042 - symbol:VC_2042 "histone deacetylase/Ac...   123  3.9e-07   2
UNIPROTKB|F1SPG6 - symbol:F1SPG6 "Uncharacterized protein...    93  5.2e-07   3
UNIPROTKB|C9JEC8 - symbol:HDAC11 "Histone deacetylase 11"...    93  1.4e-06   2
UNIPROTKB|E7ETT9 - symbol:HDAC11 "Histone deacetylase 11"...    93  1.8e-06   3
UNIPROTKB|F1MWX4 - symbol:HDAC11 "Uncharacterized protein...    95  4.1e-06   3
UNIPROTKB|B5MCV5 - symbol:HDAC11 "Histone deacetylase 11"...    93  5.1e-06   2
UNIPROTKB|I3LTU6 - symbol:LOC100738481 "Uncharacterized p...    93  5.5e-06   2
ZFIN|ZDB-GENE-040704-7 - symbol:hdac11 "histone deacetyla...    89  9.4e-06   3
WB|WBGene00001838 - symbol:hda-10 species:6239 "Caenorhab...   129  1.1e-05   3
UNIPROTKB|F1PSI9 - symbol:HDAC11 "Uncharacterized protein...    94  1.8e-05   3
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety...   122  1.9e-05   2
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s...   105  3.0e-05   3
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd...   105  3.1e-05   3
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c...   105  3.1e-05   3
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1...   104  5.2e-05   2
TAIR|locus:2180657 - symbol:HDA2 "AT5G26040" species:3702...    92  8.6e-05   3
UNIPROTKB|B5MCU6 - symbol:HDAC11 "Histone deacetylase 11"...    97  8.9e-05   2
UNIPROTKB|F1SEI2 - symbol:HDAC9 "Uncharacterized protein"...   102  0.00017   1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp...   100  0.00017   2
UNIPROTKB|B5MCQ6 - symbol:HDAC11 "Histone deacetylase 11"...    95  0.00021   2
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso...   120  0.00029   2
UNIPROTKB|C9J2I7 - symbol:HDAC11 "Histone deacetylase 11"...    95  0.00039   2
UNIPROTKB|Q484X2 - symbol:CPS_1655 "Histone deacetylase f...   102  0.00082   2
TIGR_CMR|CPS_1655 - symbol:CPS_1655 "histone deacetylase ...   102  0.00082   2
UNIPROTKB|C9J528 - symbol:HDAC11 "Histone deacetylase 11"...    95  0.00093   1


>UNIPROTKB|Q48DS3 [details] [associations]
            symbol:PSPPH_4352 "Histone deacetylase family protein"
            species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
            STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
            ProtClustDB:CLSK909647 Uniprot:Q48DS3
        Length = 305

 Score = 158 (60.7 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
 Identities = 32/90 (35%), Positives = 46/90 (51%)

Query:    31 LPIIHTNKYECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTK 90
             LP+I+   Y    P +HRFPM KF    +YLV D  +    QL+ P+     I  L H  
Sbjct:     3 LPLIYHEDYSPDFPADHRFPMDKFRLLRDYLV-DSGLTSDVQLMRPELCPADILALAHDP 61

Query:    91 EYVHKFFNGKTTEKEQKVTGFEWSAGLASR 120
              Y+ ++ NG  + ++Q+  G  WS  LA R
Sbjct:    62 SYISRYLNGDLSREDQRRLGLPWSEALARR 91

 Score = 137 (53.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 33/93 (35%), Positives = 49/93 (52%)

Query:   457 DVGTDDAGNRTVALTWVTFLSQRSEKMRNNGIFLFLLRLSDPEINRFS--THHAFPDHGA 514
             D+  +D   R + L W   L++R+       +      L        +  THHA  D+ A
Sbjct:    71 DLSRED--QRRLGLPWSEALARRTVSAVGGSLLTAEQALKHGMACHLAGGTHHAHYDYPA 128

Query:   515 GFCLMNDMALAARYLIRHGIVRKVLIVDLDVHQ 547
             GFC+ ND+A+ ++YL++ G V KVLI D DVHQ
Sbjct:   129 GFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQ 161

 Score = 112 (44.5 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query:   195 SGYQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             + Y   + + L  +L  +KPDLV+YDAGVD H+ D LG L LTD G
Sbjct:   206 ANYLNVVDDLLNYLLPFYKPDLVLYDAGVDVHKDDALGYLQLTDQG 251

 Score = 105 (42.0 bits), Expect = 3.4e-22, Sum P(3) = 3.4e-22
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query:   417 YDGDGTAFIF-DKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGTDDAGNRTVALTWVTF 475
             + GDGTA I  D + A+ T S+HC +N+P RK  SD D+ + +G  DA    V    + +
Sbjct:   160 HQGDGTARILADTEDAI-TVSLHCEKNFPARKAQSDWDIPLPMGMGDANYLNVVDDLLNY 218

Query:   476 L 476
             L
Sbjct:   219 L 219

 Score = 104 (41.7 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
 Identities = 24/55 (43%), Positives = 31/55 (56%)

Query:   566 GLYMRDYYVLDTAISAGIPVATVTGGGYCADIDQLAQRQTIIHRAATHVYKERGL 620
             G+  RD  VL   +S  IPV  V GGGY  D   LA+R  I+H +A  V+ + GL
Sbjct:   251 GVANRDEAVLRHCLSRDIPVMGVIGGGYSKDRQALARRHGILHHSAQRVWDDMGL 305

 Score = 70 (29.7 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
 Identities = 14/22 (63%), Positives = 16/22 (72%)

Query:   252 EAGVDPHQHDELGKLNLTDHGV 273
             +AGVD H+ D LG L LTD GV
Sbjct:   231 DAGVDVHKDDALGYLQLTDQGV 252


>UNIPROTKB|Q4K5L2 [details] [associations]
            symbol:PFL_5403 "Histone deacetylase family protein"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
            KEGG:pfl:PFL_5403 PATRIC:19880291
            BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
        Length = 306

 Score = 149 (57.5 bits), Expect = 6.8e-23, Sum P(3) = 6.8e-23
 Identities = 29/90 (32%), Positives = 47/90 (52%)

Query:    31 LPIIHTNKYECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTK 90
             LP+I+ + Y    P  HRFPM KF    ++LV D  + +   L+ P+     I  L H  
Sbjct:     3 LPLIYHDDYSPEFPAEHRFPMDKFRLLRDHLV-DSGLTRDADLLRPELCPAEILALAHDP 61

Query:    91 EYVHKFFNGKTTEKEQKVTGFEWSAGLASR 120
              Y+ ++ +G+ + ++Q+  G  WS  LA R
Sbjct:    62 AYIERYMSGELSREDQRRLGLPWSEALARR 91

 Score = 131 (51.2 bits), Expect = 6.8e-23, Sum P(3) = 6.8e-23
 Identities = 24/43 (55%), Positives = 31/43 (72%)

Query:   505 THHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVHQ 547
             THHA  D+ AGFC+ ND+A+ + YL+  G V +VLI D DVHQ
Sbjct:   119 THHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQ 161

 Score = 111 (44.1 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
 Identities = 23/44 (52%), Positives = 29/44 (65%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y   + + L  +L  ++PDLV+YDAGVD HQ D LG L LTD G
Sbjct:   208 YLNVVDDTLNYLLPLYQPDLVLYDAGVDVHQDDALGYLKLTDAG 251

 Score = 106 (42.4 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
 Identities = 23/58 (39%), Positives = 32/58 (55%)

Query:   406 RALIMEIGLPCYDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGTDDA 463
             R LI +  +  + GDGTA I        T S+HC +N+P RK  SD D+ + +G  DA
Sbjct:   151 RVLIFDCDV--HQGDGTARILQHTADAVTVSLHCEKNFPARKAQSDWDIPLPMGMGDA 206

 Score = 96 (38.9 bits), Expect = 6.8e-23, Sum P(3) = 6.8e-23
 Identities = 27/77 (35%), Positives = 37/77 (48%)

Query:   543 LDVHQHTRSIPVPSLTVLSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGYCADIDQLAQ 602
             +DVHQ        +L  L     G+  RD  V+   +   IPV  V GGGY  D   LA+
Sbjct:   234 VDVHQDD------ALGYLKLTDAGVAERDERVMRHCLGRDIPVVGVIGGGYSKDRQALAR 287

Query:   603 RQTIIHRAATHVYKERG 619
             R  I+H +A  V++  G
Sbjct:   288 RHGILHHSAQKVWESSG 304

 Score = 72 (30.4 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
 Identities = 15/22 (68%), Positives = 16/22 (72%)

Query:   252 EAGVDPHQHDELGKLNLTDHGV 273
             +AGVD HQ D LG L LTD GV
Sbjct:   231 DAGVDVHQDDALGYLKLTDAGV 252


>UNIPROTKB|Q47YS1 [details] [associations]
            symbol:CPS_3373 "Histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
            GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
            GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
            HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
            BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
        Length = 300

 Score = 126 (49.4 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
 Identities = 31/89 (34%), Positives = 45/89 (50%)

Query:   461 DDAGNRTVALTWVTFLSQRSEKMRNNGIFLFLLRLS-DPEINRFST-HHAFPDHGAGFCL 518
             D    R +   W   L +R+       I    L L     +N     HHAF + G+GFC+
Sbjct:    73 DSKAMRRIGFPWSQQLIERTLTAVGGTIMTAQLALEYGKSLNLTGGYHHAFANFGSGFCM 132

Query:   519 MNDMALAARYLIRHGIVRKVLIVDLDVHQ 547
             +ND+ LAA  ++++  + KVLI D DVHQ
Sbjct:   133 INDLYLAALTMLQNDNISKVLIFDADVHQ 161

 Score = 111 (44.1 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
 Identities = 22/47 (46%), Positives = 31/47 (65%)

Query:   417 YDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGTDDA 463
             + GDGTA +   +  VFT S+H  +N+P RKQ S+LD A+  GT D+
Sbjct:   160 HQGDGTAKLASNNQNVFTVSIHGEKNFPHRKQVSNLDFALPKGTTDS 206

 Score = 105 (42.0 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
 Identities = 25/91 (27%), Positives = 40/91 (43%)

Query:    33 IIHTNKYECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEY 92
             + H    +  LP  HRFP+ K+    N LV + V   +    +P  ++    + V+   Y
Sbjct:     6 VFHPIYSQLELPIRHRFPIEKYVGIRNALVANGV--PNNWFKKPTPVNPDNVKTVYDPTY 63

Query:    93 VHKFFNGKTTEKEQKVTGFEWSAGLASRVRT 123
             +H+  N +   K  +  GF WS  L  R  T
Sbjct:    64 IHQLINNQLDSKAMRRIGFPWSQQLIERTLT 94

 Score = 104 (41.7 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
 Identities = 21/44 (47%), Positives = 28/44 (63%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y  T+   L    + FKPD VIYDAGVD H +D+LG L+++  G
Sbjct:   208 YLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDISTQG 251

 Score = 78 (32.5 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query:   566 GLYMRDYYVLDTAISAGIPVATVTGGGYCADIDQL 600
             G+  RD  V D     GIP+A V GGGY  DI+ L
Sbjct:   251 GVLARDKLVFDYCKLKGIPIAAVIGGGYQRDIEAL 285

 Score = 59 (25.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
 Identities = 11/22 (50%), Positives = 17/22 (77%)

Query:   252 EAGVDPHQHDELGKLNLTDHGV 273
             +AGVD H +D+LG L+++  GV
Sbjct:   231 DAGVDIHCNDDLGHLDISTQGV 252


>TIGR_CMR|CPS_3373 [details] [associations]
            symbol:CPS_3373 "histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
            GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
            GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
            HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
            BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
        Length = 300

 Score = 126 (49.4 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
 Identities = 31/89 (34%), Positives = 45/89 (50%)

Query:   461 DDAGNRTVALTWVTFLSQRSEKMRNNGIFLFLLRLS-DPEINRFST-HHAFPDHGAGFCL 518
             D    R +   W   L +R+       I    L L     +N     HHAF + G+GFC+
Sbjct:    73 DSKAMRRIGFPWSQQLIERTLTAVGGTIMTAQLALEYGKSLNLTGGYHHAFANFGSGFCM 132

Query:   519 MNDMALAARYLIRHGIVRKVLIVDLDVHQ 547
             +ND+ LAA  ++++  + KVLI D DVHQ
Sbjct:   133 INDLYLAALTMLQNDNISKVLIFDADVHQ 161

 Score = 111 (44.1 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
 Identities = 22/47 (46%), Positives = 31/47 (65%)

Query:   417 YDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGTDDA 463
             + GDGTA +   +  VFT S+H  +N+P RKQ S+LD A+  GT D+
Sbjct:   160 HQGDGTAKLASNNQNVFTVSIHGEKNFPHRKQVSNLDFALPKGTTDS 206

 Score = 105 (42.0 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
 Identities = 25/91 (27%), Positives = 40/91 (43%)

Query:    33 IIHTNKYECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEY 92
             + H    +  LP  HRFP+ K+    N LV + V   +    +P  ++    + V+   Y
Sbjct:     6 VFHPIYSQLELPIRHRFPIEKYVGIRNALVANGV--PNNWFKKPTPVNPDNVKTVYDPTY 63

Query:    93 VHKFFNGKTTEKEQKVTGFEWSAGLASRVRT 123
             +H+  N +   K  +  GF WS  L  R  T
Sbjct:    64 IHQLINNQLDSKAMRRIGFPWSQQLIERTLT 94

 Score = 104 (41.7 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
 Identities = 21/44 (47%), Positives = 28/44 (63%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y  T+   L    + FKPD VIYDAGVD H +D+LG L+++  G
Sbjct:   208 YLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDISTQG 251

 Score = 78 (32.5 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query:   566 GLYMRDYYVLDTAISAGIPVATVTGGGYCADIDQL 600
             G+  RD  V D     GIP+A V GGGY  DI+ L
Sbjct:   251 GVLARDKLVFDYCKLKGIPIAAVIGGGYQRDIEAL 285

 Score = 59 (25.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
 Identities = 11/22 (50%), Positives = 17/22 (77%)

Query:   252 EAGVDPHQHDELGKLNLTDHGV 273
             +AGVD H +D+LG L+++  GV
Sbjct:   231 DAGVDIHCNDDLGHLDISTQGV 252


>UNIPROTKB|Q8EFZ9 [details] [associations]
            symbol:SO_1815 "Histone deacetylase superfamily protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
            KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
            Uniprot:Q8EFZ9
        Length = 304

 Score = 134 (52.2 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
 Identities = 62/257 (24%), Positives = 103/257 (40%)

Query:    31 LPIIHTNKY-ECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQIS-ESIAELVH 88
             +P+++   Y +  LP +HRFP +K++  + YL+ D  +    Q   P  ++ E I + VH
Sbjct:     2 IPLVYHASYSKLALPIHHRFPTTKYAHLYQYLL-DNQLATPTQFHTPTPMTAEEIMQ-VH 59

Query:    89 TKEYVHKFFNGKTTEKEQKVTGFEWSAGLASRVRTDPVPTHV---------IAVYLPFFL 139
              ++YV +F +G       +  GF WS  L  R       T +         IA++L    
Sbjct:    60 HRDYVEQFIDGTLATSALRRIGFPWSEALVERTLHSLAGTSLTAALALQTGIALHLTGGY 119

Query:   140 QRRPVFFDIA-AVLADLICIAVYLTFFLQRRPVF-FDIAAVLADLIHFMVGINTQPVSGY 197
                   F     +  DLI  A  L    Q   +  FD      D    +  ++ Q +   
Sbjct:   120 HHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLSQLH-QGIISC 178

Query:   198 QATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGK-LNLTDHGECISSSARISSEAGVD 256
                 K++ P        D+ +     D    D + + L L      +     I  +AGVD
Sbjct:   179 SIHCKDNFPSRKQHSHYDIELVKGTDDSAYLDTVEQTLELLIR---LHQPDLILYDAGVD 235

Query:   257 PHQHDELGKLNLTDHGV 273
              HQ D+LG L ++  G+
Sbjct:   236 IHQDDDLGHLQISQQGL 252

 Score = 119 (46.9 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
 Identities = 26/50 (52%), Positives = 32/50 (64%)

Query:   566 GLYMRDYYVLDTAISAGIPVATVTGGGYCADIDQLAQRQTIIHRAATHVY 615
             GLY RD  VL  A +A IPVA V GGGY  D  QL+QR + +  AA H++
Sbjct:   251 GLYQRDVTVLSMARAANIPVAAVIGGGYSRDALQLSQRHSQLFIAANHLW 300

 Score = 114 (45.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVHQ 547
             HHA  + G+G+C+ ND+ +AAR LI    + K+LI D DVHQ
Sbjct:   120 HHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQ 161

 Score = 107 (42.7 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query:   405 HRALIMEIGLPCYDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGTDDA 463
             H+ LI +  +  + GDGTA +      + + S+HC  N+P RKQ S  D+ +  GTDD+
Sbjct:   150 HKILIFDCDV--HQGDGTATLSQLHQGIISCSIHCKDNFPSRKQHSHYDIELVKGTDDS 206


>TIGR_CMR|SO_1815 [details] [associations]
            symbol:SO_1815 "histone deacetylase/AcuC/AphA family
            protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
            KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
            Uniprot:Q8EFZ9
        Length = 304

 Score = 134 (52.2 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
 Identities = 62/257 (24%), Positives = 103/257 (40%)

Query:    31 LPIIHTNKY-ECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQIS-ESIAELVH 88
             +P+++   Y +  LP +HRFP +K++  + YL+ D  +    Q   P  ++ E I + VH
Sbjct:     2 IPLVYHASYSKLALPIHHRFPTTKYAHLYQYLL-DNQLATPTQFHTPTPMTAEEIMQ-VH 59

Query:    89 TKEYVHKFFNGKTTEKEQKVTGFEWSAGLASRVRTDPVPTHV---------IAVYLPFFL 139
              ++YV +F +G       +  GF WS  L  R       T +         IA++L    
Sbjct:    60 HRDYVEQFIDGTLATSALRRIGFPWSEALVERTLHSLAGTSLTAALALQTGIALHLTGGY 119

Query:   140 QRRPVFFDIA-AVLADLICIAVYLTFFLQRRPVF-FDIAAVLADLIHFMVGINTQPVSGY 197
                   F     +  DLI  A  L    Q   +  FD      D    +  ++ Q +   
Sbjct:   120 HHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTATLSQLH-QGIISC 178

Query:   198 QATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGK-LNLTDHGECISSSARISSEAGVD 256
                 K++ P        D+ +     D    D + + L L      +     I  +AGVD
Sbjct:   179 SIHCKDNFPSRKQHSHYDIELVKGTDDSAYLDTVEQTLELLIR---LHQPDLILYDAGVD 235

Query:   257 PHQHDELGKLNLTDHGV 273
              HQ D+LG L ++  G+
Sbjct:   236 IHQDDDLGHLQISQQGL 252

 Score = 119 (46.9 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
 Identities = 26/50 (52%), Positives = 32/50 (64%)

Query:   566 GLYMRDYYVLDTAISAGIPVATVTGGGYCADIDQLAQRQTIIHRAATHVY 615
             GLY RD  VL  A +A IPVA V GGGY  D  QL+QR + +  AA H++
Sbjct:   251 GLYQRDVTVLSMARAANIPVAAVIGGGYSRDALQLSQRHSQLFIAANHLW 300

 Score = 114 (45.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVHQ 547
             HHA  + G+G+C+ ND+ +AAR LI    + K+LI D DVHQ
Sbjct:   120 HHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQ 161

 Score = 107 (42.7 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query:   405 HRALIMEIGLPCYDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGTDDA 463
             H+ LI +  +  + GDGTA +      + + S+HC  N+P RKQ S  D+ +  GTDD+
Sbjct:   150 HKILIFDCDV--HQGDGTATLSQLHQGIISCSIHCKDNFPSRKQHSHYDIELVKGTDDS 206


>UNIPROTKB|F1NYW6 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
            UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
            Uniprot:F1NYW6
        Length = 357

 Score = 94 (38.1 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
 Identities = 20/43 (46%), Positives = 24/43 (55%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLI-RHGIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L  R   V K  I+DLD HQ
Sbjct:   141 HHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATIIDLDAHQ 183

 Score = 84 (34.6 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y   +  H+ G L + KPD+++Y+AG D    D LG L ++  G
Sbjct:   233 YLQKVHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAISPQG 276

 Score = 80 (33.2 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
 Identities = 18/67 (26%), Positives = 36/67 (53%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++  Y  T   L   H F   K+ K  N+L  +K+I     +++ ++ ++    +VH
Sbjct:    16 PIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIGDDL-IVQAREATDEDLLVVH 74

Query:    89 TKEYVHK 95
             T+ Y++K
Sbjct:    75 TRRYLNK 81

 Score = 67 (28.6 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
 Identities = 14/28 (50%), Positives = 16/28 (57%)

Query:   566 GLYMRDYYVLDTAISAGIPVATVTGGGY 593
             G+  RD  V   A S GIP+  VT GGY
Sbjct:   276 GIVKRDEVVFKAARSRGIPILMVTSGGY 303


>UNIPROTKB|Q96DB2 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
            "chromatin modification" evidence=TAS] [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0016575 "histone
            deacetylation" evidence=IDA] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
            EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
            EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
            RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
            SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
            PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
            DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
            GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
            GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
            PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
            InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
            BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
            ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
            Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
        Length = 347

 Score = 95 (38.5 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  N+L  +K++  S  L+E ++ SE    +VH
Sbjct:    17 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVH 75

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    76 TRRYLNE 82

 Score = 93 (37.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   142 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 184

 Score = 68 (29.0 bits), Expect = 0.00049, Sum P(2) = 0.00049
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y   ++ ++   L +  PD+V+Y+AG D  + D LG L+++  G
Sbjct:   234 YLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAG 277

 Score = 50 (22.7 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query:   560 LSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGY 593
             LS    G+  RD  V        +P+  VT GGY
Sbjct:   271 LSISPAGIVKRDELVFRMVRGRRVPILMVTSGGY 304


>UNIPROTKB|Q9GKU5 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
            fascicularis" [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
            EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
        Length = 347

 Score = 95 (38.5 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  N+L  +K++  S  L+E ++ SE    +VH
Sbjct:    17 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVH 75

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    76 TRRYLNE 82

 Score = 93 (37.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   142 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 184

 Score = 68 (29.0 bits), Expect = 0.00049, Sum P(2) = 0.00049
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y   ++ ++   L +  PD+V+Y+AG D  + D LG L+++  G
Sbjct:   234 YLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAG 277

 Score = 50 (22.7 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query:   560 LSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGY 593
             LS    G+  RD  V        +P+  VT GGY
Sbjct:   271 LSISPAGIVKRDELVFRMVRGRHVPILMVTSGGY 304


>MGI|MGI:2385252 [details] [associations]
            symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex"
            evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
            evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
            evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
            evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
            [GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
            MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
            GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
            HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
            IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
            ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
            STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
            DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
            KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
            OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
            Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
            GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
        Length = 347

 Score = 93 (37.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   142 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 184

 Score = 91 (37.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 20/67 (29%), Positives = 37/67 (55%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  N+L  +K++     L+E ++ SE    +VH
Sbjct:    17 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDG-MLVEAREASEEDLLVVH 75

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    76 TRRYLNE 82

 Score = 53 (23.7 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query:   560 LSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGY 593
             LS    G+  RD  V     +  IP+  VT GGY
Sbjct:   271 LSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGY 304


>RGD|1311706 [details] [associations]
            symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
            membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
            development" evidence=IMP] [GO:0016575 "histone deacetylation"
            evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
            GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
            GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
            IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
            STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
            KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
            Genevestigator:B2GUW3 Uniprot:B2GUW3
        Length = 347

 Score = 93 (37.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   142 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 184

 Score = 91 (37.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 20/67 (29%), Positives = 37/67 (55%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  N+L  +K++     L+E ++ SE    +VH
Sbjct:    17 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDG-MLVEAREASEEDLLVVH 75

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    76 TRRYLNE 82

 Score = 53 (23.7 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query:   560 LSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGY 593
             LS    G+  RD  V     +  IP+  VT GGY
Sbjct:   271 LSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGY 304


>UNIPROTKB|Q9KQF6 [details] [associations]
            symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
            protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
            ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
            KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
            Uniprot:Q9KQF6
        Length = 306

 Score = 123 (48.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA  D G+GFCL ND+A+AA + +    V KVLI+D DVH
Sbjct:   125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVH 165

 Score = 98 (39.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
 Identities = 57/261 (21%), Positives = 102/261 (39%)

Query:    31 LPIIHTNKY-ECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQL-IE-PQQISESIAEL- 86
             +P+I+   Y +  LP  HR+P++K+   +  +VR +   ++ Q   E    I+  ++ + 
Sbjct:     2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61

Query:    87 -VHTKEYVHKFFNGKTTEKEQKVTGFEWSAGLASR---------VRTDPVPTHVIAVYLP 136
              +H  +YV     G  +  + +  GF WS  L  R         +  +      +A++L 
Sbjct:    62 RLHDPDYVQALLEGTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQALQSGVAIHLS 121

Query:   137 FFLQRRPVFFDIAAVLADLICIAVYLTFFLQRRPVFFDIAAVLADLIHFMVGINTQPVSG 196
                      F     L + + IA +    L   P    +  + +D +H   G  T     
Sbjct:   122 GGYHHAHADFGSGFCLFNDLAIAAHFALSL---PSVDKVLIIDSD-VHHGDGTATLCAER 177

Query:   197 YQA-TLKEHLPGILAQFKPDLVIYDAGVDPHQHDE--LGK-LNLTDHGECISSSARISSE 252
              +  TL  H        KP   + D G      DE  L   + + +    +     I  +
Sbjct:   178 DEIITLSFHCDKNFPARKPASSM-DVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLILYD 236

Query:   253 AGVDPHQHDELGKLNLTDHGV 273
             AGVD H  DELG L+++   +
Sbjct:   237 AGVDIHNDDELGYLSISQAAI 257

 Score = 94 (38.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query:   401 MKSSHRALIMEIGLPCYDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGT 460
             + S  + LI++  +  + GDGTA +  +   + T S HC +N+P RK  S +DV     T
Sbjct:   151 LPSVDKVLIIDSDV--HHGDGTATLCAERDEIITLSFHCDKNFPARKPASSMDVGYANQT 208

Query:   461 DD 462
              D
Sbjct:   209 GD 210

 Score = 66 (28.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query:   557 LTVLSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGYCADIDQLAQRQTIIHRAA 611
             L  LS     +  RD ++L  A    IP+A V GGGY  D   L      + +AA
Sbjct:   247 LGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGYREDHTALVPLHLELLKAA 301


>TIGR_CMR|VC_2042 [details] [associations]
            symbol:VC_2042 "histone deacetylase/AcuC/AphA family
            protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
            PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
            DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
            ProtClustDB:CLSK874650 Uniprot:Q9KQF6
        Length = 306

 Score = 123 (48.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA  D G+GFCL ND+A+AA + +    V KVLI+D DVH
Sbjct:   125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVH 165

 Score = 98 (39.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
 Identities = 57/261 (21%), Positives = 102/261 (39%)

Query:    31 LPIIHTNKY-ECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQL-IE-PQQISESIAEL- 86
             +P+I+   Y +  LP  HR+P++K+   +  +VR +   ++ Q   E    I+  ++ + 
Sbjct:     2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61

Query:    87 -VHTKEYVHKFFNGKTTEKEQKVTGFEWSAGLASR---------VRTDPVPTHVIAVYLP 136
              +H  +YV     G  +  + +  GF WS  L  R         +  +      +A++L 
Sbjct:    62 RLHDPDYVQALLEGTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQALQSGVAIHLS 121

Query:   137 FFLQRRPVFFDIAAVLADLICIAVYLTFFLQRRPVFFDIAAVLADLIHFMVGINTQPVSG 196
                      F     L + + IA +    L   P    +  + +D +H   G  T     
Sbjct:   122 GGYHHAHADFGSGFCLFNDLAIAAHFALSL---PSVDKVLIIDSD-VHHGDGTATLCAER 177

Query:   197 YQA-TLKEHLPGILAQFKPDLVIYDAGVDPHQHDE--LGK-LNLTDHGECISSSARISSE 252
              +  TL  H        KP   + D G      DE  L   + + +    +     I  +
Sbjct:   178 DEIITLSFHCDKNFPARKPASSM-DVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLILYD 236

Query:   253 AGVDPHQHDELGKLNLTDHGV 273
             AGVD H  DELG L+++   +
Sbjct:   237 AGVDIHNDDELGYLSISQAAI 257

 Score = 94 (38.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query:   401 MKSSHRALIMEIGLPCYDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGT 460
             + S  + LI++  +  + GDGTA +  +   + T S HC +N+P RK  S +DV     T
Sbjct:   151 LPSVDKVLIIDSDV--HHGDGTATLCAERDEIITLSFHCDKNFPARKPASSMDVGYANQT 208

Query:   461 DD 462
              D
Sbjct:   209 GD 210

 Score = 66 (28.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query:   557 LTVLSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGYCADIDQLAQRQTIIHRAA 611
             L  LS     +  RD ++L  A    IP+A V GGGY  D   L      + +AA
Sbjct:   247 LGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGYREDHTALVPLHLELLKAA 301


>UNIPROTKB|F1SPG6 [details] [associations]
            symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00390000003411 EMBL:CU928273
            Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
        Length = 382

 Score = 93 (37.8 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   141 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 183

 Score = 86 (35.3 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
 Identities = 19/67 (28%), Positives = 38/67 (56%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  ++L  +K++  S  L+E ++ S+    +VH
Sbjct:    16 PIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLTDS-MLVEAREASDEDLLVVH 74

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    75 TRRYLNE 81

 Score = 80 (33.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
 Identities = 15/44 (34%), Positives = 27/44 (61%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y   ++ +L   L + +PD+V+Y+AG D  + D LG L+++  G
Sbjct:   233 YLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSISPQG 276

 Score = 54 (24.1 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query:   560 LSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGY 593
             LS    G+  RD  V     S  +P+  VT GGY
Sbjct:   270 LSISPQGIVKRDELVFRMVRSLQVPILMVTSGGY 303


>UNIPROTKB|C9JEC8 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
            SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
            ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
        Length = 166

 Score = 93 (37.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   114 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 156

 Score = 81 (33.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query:    47 HRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEYVHK 95
             H F   K+ K  N+L  +K++  S  L+E ++ SE    +VHT+ Y+++
Sbjct:     7 HPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVHTRRYLNE 54


>UNIPROTKB|E7ETT9 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
            Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
            Uniprot:E7ETT9
        Length = 319

 Score = 93 (37.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   114 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 156

 Score = 81 (33.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query:    47 HRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEYVHK 95
             H F   K+ K  N+L  +K++  S  L+E ++ SE    +VHT+ Y+++
Sbjct:     7 HPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVHTRRYLNE 54

 Score = 50 (22.7 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query:   560 LSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGY 593
             LS    G+  RD  V        +P+  VT GGY
Sbjct:   243 LSISPAGIVKRDELVFRMVRGRRVPILMVTSGGY 276


>UNIPROTKB|F1MWX4 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
            "histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
            Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
        Length = 386

 Score = 95 (38.5 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
 Identities = 20/43 (46%), Positives = 24/43 (55%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLI-RHGIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L  R   + K  IVDLD HQ
Sbjct:   141 HHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQ 183

 Score = 83 (34.3 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  + L  +K++  S  L+E ++ S+    +VH
Sbjct:    16 PIVYSPRYNITFLGLEKLHPFDAGKWGKVISLLKEEKLLSDS-MLVEAREASDEDLLVVH 74

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    75 TRRYLNE 81

 Score = 76 (31.8 bits), Expect = 0.00040, Sum P(3) = 0.00040
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y   ++ +L   L + +PD+V+Y+AG D  + D LG L ++  G
Sbjct:   233 YLQKVERNLEKALQEHRPDIVVYNAGTDILEGDRLGGLAISPQG 276

 Score = 46 (21.3 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query:   566 GLYMRDYYVLDTAISAGIPVATVTGGGY 593
             G+  RD  V        +P+  VT GGY
Sbjct:   276 GVVKRDELVFRIVRGRQLPILMVTSGGY 303


>UNIPROTKB|B5MCV5 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
            ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
            Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
            Bgee:B5MCV5 Uniprot:B5MCV5
        Length = 204

 Score = 93 (37.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   114 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 156

 Score = 81 (33.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query:    47 HRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEYVHK 95
             H F   K+ K  N+L  +K++  S  L+E ++ SE    +VHT+ Y+++
Sbjct:     7 HPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVHTRRYLNE 54


>UNIPROTKB|I3LTU6 [details] [associations]
            symbol:LOC100738481 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:FP700091
            Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
        Length = 275

 Score = 93 (37.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   I+DLD HQ
Sbjct:   141 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IIDLDAHQ 183

 Score = 86 (35.3 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
 Identities = 19/67 (28%), Positives = 38/67 (56%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  ++L  +K++  S  L+E ++ S+    +VH
Sbjct:    16 PIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLTDS-MLVEAREASDEDLLVVH 74

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    75 TRRYLNE 81

 Score = 75 (31.5 bits), Expect = 0.00045, Sum P(2) = 0.00044
 Identities = 14/41 (34%), Positives = 26/41 (63%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLT 237
             Y   ++ +L   L + +PD+V+Y+AG D  + D LG L+++
Sbjct:   233 YLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSIS 273


>ZFIN|ZDB-GENE-040704-7 [details] [associations]
            symbol:hdac11 "histone deacetylase 11" species:7955
            "Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
            GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
            HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
            IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
            ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
            KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
        Length = 366

 Score = 89 (36.4 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
 Identities = 19/43 (44%), Positives = 23/43 (53%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLI-RHGIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L  R   V    I+DLD HQ
Sbjct:   153 HHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQ 195

 Score = 77 (32.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query:   195 SGYQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             S Y   +  H  G L + +PD++IY+AG D    D LG L ++  G
Sbjct:   243 SEYLQKVDLHSEGALNEARPDIIIYNAGTDILDGDPLGGLAISPQG 288

 Score = 71 (30.1 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
 Identities = 18/68 (26%), Positives = 36/68 (52%)

Query:    31 LPIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELV 87
             LPI+++ +Y  T   L   H F   K+ K   +L  ++ I   + ++  ++ SE+   +V
Sbjct:    27 LPIVYSPEYNITFMGLEKLHPFDAGKWGKVIRFLKEEQFIT-DEIIVLAREASEADLLVV 85

Query:    88 HTKEYVHK 95
             HT  Y+++
Sbjct:    86 HTARYLNR 93

 Score = 60 (26.2 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query:   566 GLYMRDYYVLDTAISAGIPVATVTGGGY 593
             G+  RD  +   A   GIP+  VT GGY
Sbjct:   288 GIIKRDEIIFRAARRRGIPILMVTSGGY 315


>WB|WBGene00001838 [details] [associations]
            symbol:hda-10 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
            "histone deacetylase activity" evidence=ISS] Pfam:PF00850
            INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
            PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
            SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
            EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
            CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
            OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
        Length = 517

 Score = 129 (50.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
 Identities = 24/41 (58%), Positives = 32/41 (78%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA PD G GFC+ N++A+AA+  I++G  +KVLIVD DVH
Sbjct:   137 HHAMPDEGCGFCIFNNVAIAAKAAIQNG--QKVLIVDYDVH 175

 Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query:   579 ISAGIPVATVTGGGYCADIDQLAQRQTIIHRA 610
             I  GIPVA +  GGY   +D LA     + RA
Sbjct:   288 IDTGIPVAALLEGGYF--LDALAADSEWVLRA 317

 Score = 43 (20.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query:    74 IEPQQISESIAELVHTKEYVHKFFNGKTTEKEQK 107
             I  ++  ES    VHTK YV    + +T   EQ+
Sbjct:    54 IPRREAEESEILAVHTKRYVDDVKSTETMTVEQQ 87


>UNIPROTKB|F1PSI9 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
            Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
        Length = 319

 Score = 94 (38.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
 Identities = 21/44 (47%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRH--GIVRKVLIVDLDVHQ 547
             HH   D G GFC   D+ LA ++L     GI R   IVDLD HQ
Sbjct:   114 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT-IVDLDAHQ 156

 Score = 69 (29.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
 Identities = 13/49 (26%), Positives = 28/49 (57%)

Query:    47 HRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEYVHK 95
             H F   K+ K  ++L  +K++     L+E ++ S+    +VHT+ Y+++
Sbjct:     7 HPFDAGKWGKVISFLKEEKLLSDG-MLVEAREASDEDLLVVHTRRYLNE 54

 Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query:   560 LSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGY 593
             LS    G+  RD  V        +P+  VT GGY
Sbjct:   243 LSISPQGIVKRDELVFRVVRGRQVPILMVTSGGY 276


>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
            symbol:hdac6 "histone deacetylase 6" species:7955
            "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
            "angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
            GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
            CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
            RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
            Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
            NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
        Length = 1081

 Score = 122 (48.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
 Identities = 27/53 (50%), Positives = 35/53 (66%)

Query:   500 INRFSTHHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVHQHTRSI 552
             INR   HHA  D   GFC+ N++A+AARY  +   V++VLIVD DVH H + I
Sbjct:   186 INRPPGHHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVH-HGQGI 237

 Score = 93 (37.8 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
 Identities = 23/44 (52%), Positives = 24/44 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVR---KVLIVDLDVH 546
             HHA  D   GFC  N  AL ARY     I R   +VLIVD DVH
Sbjct:   573 HHAEKDTACGFCFFNTAALTARYA--QSITRESLRVLIVDWDVH 614

 Score = 71 (30.1 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query:   406 RALIMEIGLPCYDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDVAIDVGTDDAGN 465
             R LI++  +  + G G  +IF++DP+V  FS+H   +  F     + D +  VG+     
Sbjct:   223 RVLIVDWDV--HHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSS-SVGSGAGQG 279

Query:   466 RTVALTW 472
               + L W
Sbjct:   280 YNINLPW 286

 Score = 66 (28.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
 Identities = 19/71 (26%), Positives = 35/71 (49%)

Query:    38 KYECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEYVHKFF 97
             ++ C    +H    ++ S     L  + ++ +  Q +E + ++E    LVHTKEYV    
Sbjct:    73 RFHCLWDASHPECPARVSTVMEMLETEGLLGRCVQ-VEARAVTEDELLLVHTKEYVELMK 131

Query:    98 NGKT-TEKEQK 107
             + +  TE+E K
Sbjct:   132 STQNMTEEELK 142


>UNIPROTKB|Q20296 [details] [associations]
            symbol:hda-6 "Histone deacetylase 6" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
            RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
            ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
            PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
            KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
            WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
            NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
        Length = 955

 Score = 105 (42.0 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA     +GFC+ N++A+AA+Y  R    ++VLI+D DVH
Sbjct:   560 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVH 600

 Score = 65 (27.9 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
 Identities = 17/70 (24%), Positives = 32/70 (45%)

Query:    37 NKYECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEYVHKF 96
             N++E T+ P H     +  K    L + K+++K   L    +I ++  E+ H K  V   
Sbjct:    24 NEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDL 83

Query:    97 FNG-KTTEKE 105
                 K T+++
Sbjct:    84 MESEKKTQED 93

 Score = 59 (25.8 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
 Identities = 17/46 (36%), Positives = 21/46 (45%)

Query:   195 SGYQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             S Y + +   L  +  QF P  VI  AG D    D LG + LT  G
Sbjct:   246 SDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDG 291

 Score = 51 (23.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query:   409 IMEIGLPCYDGDGTAFIFDKDPAVFTFSMH 438
             I+ + L  + G GT  IF  D  V  FS+H
Sbjct:   176 ILIVDLDVHHGHGTQRIFYDDKRVLYFSIH 205


>WB|WBGene00018319 [details] [associations]
            symbol:hda-6 species:6239 "Caenorhabditis elegans"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
            deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
            NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
            ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
            EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
            InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
        Length = 957

 Score = 105 (42.0 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA     +GFC+ N++A+AA+Y  R    ++VLI+D DVH
Sbjct:   562 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVH 602

 Score = 65 (27.9 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
 Identities = 17/70 (24%), Positives = 32/70 (45%)

Query:    37 NKYECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEYVHKF 96
             N++E T+ P H     +  K    L + K+++K   L    +I ++  E+ H K  V   
Sbjct:    24 NEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDL 83

Query:    97 FNG-KTTEKE 105
                 K T+++
Sbjct:    84 MESEKKTQED 93

 Score = 59 (25.8 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
 Identities = 17/46 (36%), Positives = 21/46 (45%)

Query:   195 SGYQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             S Y + +   L  +  QF P  VI  AG D    D LG + LT  G
Sbjct:   248 SDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDG 293

 Score = 51 (23.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query:   409 IMEIGLPCYDGDGTAFIFDKDPAVFTFSMH 438
             I+ + L  + G GT  IF  D  V  FS+H
Sbjct:   178 ILIVDLDVHHGHGTQRIFYDDKRVLYFSIH 207


>UNIPROTKB|A7LPD8 [details] [associations]
            symbol:hda-6 "Protein HDA-6, isoform c" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
            NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
            ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
            EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
            InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
        Length = 957

 Score = 105 (42.0 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA     +GFC+ N++A+AA+Y  R    ++VLI+D DVH
Sbjct:   562 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVH 602

 Score = 65 (27.9 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
 Identities = 17/70 (24%), Positives = 32/70 (45%)

Query:    37 NKYECTLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVHTKEYVHKF 96
             N++E T+ P H     +  K    L + K+++K   L    +I ++  E+ H K  V   
Sbjct:    24 NEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDL 83

Query:    97 FNG-KTTEKE 105
                 K T+++
Sbjct:    84 MESEKKTQED 93

 Score = 59 (25.8 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
 Identities = 17/46 (36%), Positives = 21/46 (45%)

Query:   195 SGYQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             S Y + +   L  +  QF P  VI  AG D    D LG + LT  G
Sbjct:   248 SDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDG 293

 Score = 51 (23.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query:   409 IMEIGLPCYDGDGTAFIFDKDPAVFTFSMH 438
             I+ + L  + G GT  IF  D  V  FS+H
Sbjct:   178 ILIVDLDVHHGHGTQRIFYDDKRVLYFSIH 207


>UNIPROTKB|F1LSE3 [details] [associations]
            symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
            norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
            Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
            GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
            GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
            GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
            GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
            GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
            GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
            GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
            IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
            Uniprot:F1LSE3
        Length = 1155

 Score = 104 (41.7 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
 Identities = 21/42 (50%), Positives = 27/42 (64%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYL-IRHGIVRKVLIVDLDVH 546
             HHA PD   GFC  N +A+AAR+  +  G   ++LIVD DVH
Sbjct:   612 HHAEPDAACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVH 653

 Score = 81 (33.6 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
 Identities = 20/50 (40%), Positives = 28/50 (56%)

Query:   402 KSSHRAL-IMEIGLPCYDGDGTAFIFDKDPAVFTFSMHC---GRNYPFRK 447
             +  HR   I+ +    + G GT FIFD+DP+V  FS+H    GR +P  K
Sbjct:   238 QKKHRIQRILIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLK 287


>TAIR|locus:2180657 [details] [associations]
            symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
            GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
            KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
            EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
            RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
            UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
            PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
            KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
            PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
            Uniprot:Q944K3
        Length = 387

 Score = 92 (37.4 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
 Identities = 21/71 (29%), Positives = 34/71 (47%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVHQ---HTRSIPVPS-LTVLS 561
             HH   + G GFC   D++L   +      + +V+I+DLD HQ   H   +   + + +L 
Sbjct:   200 HHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILD 259

Query:   562 SCVPGLYMRDY 572
                P +Y  DY
Sbjct:   260 MYNPEIYPFDY 270

 Score = 79 (32.9 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
 Identities = 20/84 (23%), Positives = 45/84 (53%)

Query:    28 LVHLPIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIA 84
             L  + II+++ Y+ +   +   H F  SK+ +   +LV D  +++ K ++EP + S+   
Sbjct:    71 LSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEE-KAIVEPLEASKIDL 129

Query:    85 ELVHTKEYVHKFFNGKTTEKEQKV 108
              +VH++ Y++   +  T  +  +V
Sbjct:   130 LVVHSENYLNSLKSSATVARITEV 153

 Score = 40 (19.1 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query:   443 YPFRKQCSDLDVAIDVGTD 461
             YPFRKQ     +A  + T+
Sbjct:   170 YPFRKQVGGTILAAKLATE 188


>UNIPROTKB|B5MCU6 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00790809
            ProteinModelPortal:B5MCU6 STRING:B5MCU6 Ensembl:ENST00000404040
            ArrayExpress:B5MCU6 Bgee:B5MCU6 Uniprot:B5MCU6
        Length = 247

 Score = 97 (39.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
 Identities = 23/77 (29%), Positives = 42/77 (54%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  N+L  +K++  S  L+E ++ SE    +VH
Sbjct:    17 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVH 75

Query:    89 TKEYVHKFFNGKTTEKE 105
             T+ Y+++   G   E++
Sbjct:    76 TRRYLNEL-KGNGHERD 91

 Score = 68 (29.0 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y   ++ ++   L +  PD+V+Y+AG D  + D LG L+++  G
Sbjct:   134 YLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAG 177


>UNIPROTKB|F1SEI2 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005080 "protein
            kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
            GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
            Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
        Length = 122

 Score = 102 (41.0 bits), Expect = 0.00017, P = 0.00017
 Identities = 20/41 (48%), Positives = 25/41 (60%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA      GFC  N +A+ A+YL     + K+LIVDLDVH
Sbjct:    13 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVH 53


>MGI|MGI:1333752 [details] [associations]
            symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
            "actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
            associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
            microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
            synthesized protein catabolic process" evidence=ISO] [GO:0006886
            "intracellular protein transport" evidence=ISO] [GO:0007026
            "negative regulation of microtubule depolymerization" evidence=IDA]
            [GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
            "microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0009636 "response to toxic substance"
            evidence=ISO] [GO:0009967 "positive regulation of signal
            transduction" evidence=ISO] [GO:0010033 "response to organic
            substance" evidence=ISO] [GO:0010469 "regulation of receptor
            activity" evidence=ISO] [GO:0010634 "positive regulation of
            epithelial cell migration" evidence=ISO] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=ISO]
            [GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
            evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
            "histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
            evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
            evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=ISO] [GO:0035967 "cellular response to
            topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
            deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
            activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
            evidence=ISO] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
            complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
            of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
            regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
            [GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
            "response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
            protein binding" evidence=ISO] [GO:0070201 "regulation of
            establishment of protein localization" evidence=IMP] [GO:0070301
            "cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
            "dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
            assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
            deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
            factor stimulus" evidence=ISO] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
            evidence=IMP] [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=ISO]
            [GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
            GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
            GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
            GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
            GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
            OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
            GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
            HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
            IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
            UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
            MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
            PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
            GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
            NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
            GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
        Length = 1149

 Score = 100 (40.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
 Identities = 21/42 (50%), Positives = 27/42 (64%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYL-IRHGIVRKVLIVDLDVH 546
             HHA P+   GFC  N +A+AAR+  I  G   ++LIVD DVH
Sbjct:   609 HHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVDWDVH 650

 Score = 80 (33.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
 Identities = 20/45 (44%), Positives = 28/45 (62%)

Query:   406 RALIMEIGLPCYDGDGTAFIFDKDPAVFTFSMHC---GRNYPFRK 447
             R LI++  +  + G GT FIFD+DP+V  FS+H    GR +P  K
Sbjct:   245 RVLIVDWDV--HHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLK 287


>UNIPROTKB|B5MCQ6 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
            ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
            ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
        Length = 268

 Score = 95 (38.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  N+L  +K++  S  L+E ++ SE    +VH
Sbjct:    17 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVH 75

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    76 TRRYLNE 82

 Score = 68 (29.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query:   197 YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLTDHG 240
             Y   ++ ++   L +  PD+V+Y+AG D  + D LG L+++  G
Sbjct:   155 YLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAG 198

 Score = 52 (23.4 bits), Expect = 0.00034, Sum P(3) = 0.00034
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query:   406 RALIMEIGLPCYDGDGTAFIFDKDPAVFTFSMHCGRNYP---FRKQCSDLDVAIDVGTDD 462
             RA I++  L  + G+G    F  D  V+   ++    YP   F KQ     V ++ GT+D
Sbjct:    95 RATIID--LDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTED 152

 Score = 50 (22.7 bits), Expect = 0.00034, Sum P(3) = 0.00034
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query:   560 LSSCVPGLYMRDYYVLDTAISAGIPVATVTGGGY 593
             LS    G+  RD  V        +P+  VT GGY
Sbjct:   192 LSISPAGIVKRDELVFRMVRGRRVPILMVTSGGY 225


>FB|FBgn0026428 [details] [associations]
            symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
            [GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
            [GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
            [GO:0022904 "respiratory electron transport chain" evidence=IDA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
            EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
            EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
            KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
            NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
            EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
            Uniprot:Q8IR37
        Length = 1138

 Score = 120 (47.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
 Identities = 23/41 (56%), Positives = 30/41 (73%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA  DH  GFC+ N++A+AA+Y IR   + +VLIVD DVH
Sbjct:   673 HHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVH 713

 Score = 57 (25.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
 Identities = 17/56 (30%), Positives = 30/56 (53%)

Query:   184 HFMVGIN-TQPVSG-YQATLKEHLPGILAQFKPDLVIYDAGVDPHQHDELGKLNLT 237
             +F V +N T   +G Y A  ++ L  +  +F+P+L+I  AG D       G++ +T
Sbjct:   335 NFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVT 390

 Score = 55 (24.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
 Identities = 20/63 (31%), Positives = 25/63 (39%)

Query:   409 IMEIGLPCYDGDGTAFIFDKDPAVFTFSMHCGRNYPFRKQCSDLDV-AIDVGTDDAGNRT 467
             I+ I    + G GT   F  DP V  FS+H   +  F     + D  AI  G     N  
Sbjct:   278 ILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFN 337

Query:   468 VAL 470
             V L
Sbjct:   338 VPL 340


>UNIPROTKB|C9J2I7 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 IPI:IPI00879880 ProteinModelPortal:C9J2I7
            STRING:C9J2I7 Ensembl:ENST00000458642 BindingDB:C9J2I7
            ArrayExpress:C9J2I7 Bgee:C9J2I7 Uniprot:C9J2I7
        Length = 186

 Score = 95 (38.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  N+L  +K++  S  L+E ++ SE    +VH
Sbjct:    17 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVH 75

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    76 TRRYLNE 82

 Score = 58 (25.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query:   506 HHAFPDHGAGFCLMNDMALAAR 527
             HH   D G GFC   D+ LA +
Sbjct:   142 HHCSSDRGGGFCAYADITLAIK 163


>UNIPROTKB|Q484X2 [details] [associations]
            symbol:CPS_1655 "Histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
            ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
            KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
            ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
            Uniprot:Q484X2
        Length = 317

 Score = 102 (41.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
 Identities = 20/41 (48%), Positives = 27/41 (65%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA  D G GFC  N++A+AA Y  +   +++V IVD DVH
Sbjct:   127 HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVH 167

 Score = 57 (25.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
 Identities = 17/82 (20%), Positives = 36/82 (43%)

Query:    31 LPIIHTNKYEC---TLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELV 87
             +P+     Y C    +  +H     + +   + L+R   +D   +  + + I +S+  L 
Sbjct:     1 MPVGIIGHYRCGEHNMGEHHPENGKRLTAISDQLIRSG-LDYVVRQFDSKPIDKSLLALA 59

Query:    88 HTKEYVHKFFNGKTTEKEQKVT 109
             HT+E++   F+    E E+  T
Sbjct:    60 HTQEHIDFVFDNAPNEGEENFT 81


>TIGR_CMR|CPS_1655 [details] [associations]
            symbol:CPS_1655 "histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
            ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
            KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
            ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
            Uniprot:Q484X2
        Length = 317

 Score = 102 (41.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
 Identities = 20/41 (48%), Positives = 27/41 (65%)

Query:   506 HHAFPDHGAGFCLMNDMALAARYLIRHGIVRKVLIVDLDVH 546
             HHA  D G GFC  N++A+AA Y  +   +++V IVD DVH
Sbjct:   127 HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVH 167

 Score = 57 (25.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
 Identities = 17/82 (20%), Positives = 36/82 (43%)

Query:    31 LPIIHTNKYEC---TLPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELV 87
             +P+     Y C    +  +H     + +   + L+R   +D   +  + + I +S+  L 
Sbjct:     1 MPVGIIGHYRCGEHNMGEHHPENGKRLTAISDQLIRSG-LDYVVRQFDSKPIDKSLLALA 59

Query:    88 HTKEYVHKFFNGKTTEKEQKVT 109
             HT+E++   F+    E E+  T
Sbjct:    60 HTQEHIDFVFDNAPNEGEENFT 81


>UNIPROTKB|C9J528 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
            IPI:IPI00879695 ProteinModelPortal:C9J528 SMR:C9J528 STRING:C9J528
            Ensembl:ENST00000418189 BindingDB:C9J528 ArrayExpress:C9J528
            Bgee:C9J528 Uniprot:C9J528
        Length = 107

 Score = 95 (38.5 bits), Expect = 0.00093, P = 0.00093
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query:    32 PIIHTNKYECT---LPPNHRFPMSKFSKTFNYLVRDKVIDKSKQLIEPQQISESIAELVH 88
             PI+++ +Y  T   L   H F   K+ K  N+L  +K++  S  L+E ++ SE    +VH
Sbjct:    36 PIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDS-MLVEAREASEEDLLVVH 94

Query:    89 TKEYVHK 95
             T+ Y+++
Sbjct:    95 TRRYLNE 101


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      620       620   0.00089  120 3  11 22  0.47    33
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  37
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  333 KB (2166 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  54.61u 0.10s 54.71t   Elapsed:  00:00:14
  Total cpu time:  54.62u 0.10s 54.72t   Elapsed:  00:00:14
  Start:  Thu Aug 15 11:16:56 2013   End:  Thu Aug 15 11:17:10 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with PSPPH_4352 PSPPH_4352 PSPPH_4352 Histone deacetylase family protein	protein from Pseudomonas syringae pv. phaseolicola 1448A	6.5e-23
BLAST match view associations BLAST with PFL_5403 PFL_5403 PFL_5403 Histone deacetylase family protein	protein from Pseudomonas protegens Pf-5	6.8e-23
BLAST match view associations BLAST with CPS_3373 CPS_3373 CPS_3373 Histone deacetylase family protein	protein from Colwellia psychrerythraea 34H	6.8e-14
BLAST match view associations BLAST with CPS_3373 CPS_3373 CPS_3373 histone deacetylase family protein	protein from Colwellia psychrerythraea 34H	6.8e-14
BLAST match view associations BLAST with SO_1815 SO_1815 SO_1815 Histone deacetylase superfamily protein	protein from Shewanella oneidensis MR-1	7.0e-14
BLAST match view associations BLAST with SO_1815 SO_1815 SO_1815 histone deacetylase/AcuC/AphA family protein	protein from Shewanella oneidensis MR-1	7.0e-14
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Uncharacterized protein	protein from Gallus gallus	6.0e-08
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	1.0e-07
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Macaca fascicularis	1.0e-07
BLAST match view associations BLAST with Hdac11 Hdac11 Hdac11 histone deacetylase 11	protein from Mus musculus	1.4e-07
BLAST match view associations BLAST with Hdac11 Hdac11 Hdac11 histone deacetylase 11	gene from Rattus norvegicus	1.4e-07
BLAST match view associations BLAST with VC_2042 VC_2042 VC_2042 Histone deacetylase/AcuC/AphA family protein	protein from Vibrio cholerae O1 biovar El Tor str. N16961	3.9e-07
BLAST match view associations BLAST with VC_2042 VC_2042 VC_2042 histone deacetylase/AcuC/AphA family protein	protein from Vibrio cholerae O1 biovar El Tor	3.9e-07
BLAST match view associations BLAST with F1SPG6 F1SPG6 F1SPG6 Uncharacterized protein	protein from Sus scrofa	5.2e-07
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	1.4e-06
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	1.8e-06
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Uncharacterized protein	protein from Bos taurus	4.1e-06
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	5.1e-06
BLAST match view associations BLAST with LOC100738481 LOC100738481 LOC100738481 Uncharacterized protein	protein from Sus scrofa	5.5e-06
BLAST match view associations BLAST with hdac11 hdac11 hdac11 histone deacetylase 11	gene_product from Danio rerio	9.4e-06
BLAST match view associations BLAST with hda-10 hda-10 hda-10	gene from Caenorhabditis elegans	1.1e-05
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-05
BLAST match view associations BLAST with hdac6 hdac6 hdac6 histone deacetylase 6	gene_product from Danio rerio	1.9e-05
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Histone deacetylase 6	protein from Caenorhabditis elegans	3.0e-05
BLAST match view associations BLAST with hda-6 hda-6 hda-6	gene from Caenorhabditis elegans	3.1e-05
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Protein HDA-6, isoform c	protein from Caenorhabditis elegans	3.1e-05
BLAST match view associations BLAST with HDA2 HDA2 HDA2 AT5G26040	protein from Arabidopsis thaliana	8.6e-05
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	8.9e-05
BLAST match view associations BLAST with LOC100626511 LOC100626511 LOC100626511 Uncharacterized protein	protein from Sus scrofa	0.00017
BLAST match view associations BLAST with Hdac6 Hdac6 Hdac6 histone deacetylase 6	protein from Mus musculus	0.00017
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	0.00021
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6	protein from Drosophila melanogaster	0.00029
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	0.00039
BLAST match view associations BLAST with CPS_1655 CPS_1655 CPS_1655 Histone deacetylase family protein	protein from Colwellia psychrerythraea 34H	0.00082
BLAST match view associations BLAST with CPS_1655 CPS_1655 CPS_1655 histone deacetylase family protein	protein from Colwellia psychrerythraea 34H	0.00082
BLAST match view associations BLAST with HDAC11 HDAC11 HDAC11 Histone deacetylase 11	protein from Homo sapiens	0.00093