BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16743
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XZT6|DNK_DROME Deoxynucleoside kinase OS=Drosophila melanogaster GN=dnk PE=1 SV=1
Length = 250
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 74/111 (66%)
Query: 2 RWNFSFQHYVQLTRLQMQTKVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQEFLAMSE 61
+W FQ YV LT LQ T T+KK+++ ERS+ + R+CFVE R G L + + + E
Sbjct: 75 KWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEE 134
Query: 62 WYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLHE 112
WY ++E ++ + DLI+YLR+ P+ +ER+ +R R EE+CVPL YLQ LHE
Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHE 185
>sp|O00142|KITM_HUMAN Thymidine kinase 2, mitochondrial OS=Homo sapiens GN=TK2 PE=1 SV=4
Length = 265
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 74/110 (67%)
Query: 2 RWNFSFQHYVQLTRLQMQTKVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQEFLAMSE 61
RW + Q YVQLT L T+ V+L ERS+ + R+ FVE G + + +++ +SE
Sbjct: 104 RWGLTLQTYVQLTMLDRHTRPQVSSVRLMERSIHSARYIFVENLYRSGKMPEVDYVVLSE 163
Query: 62 WYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
W+DW+ NMD+ +DLIVYLR+ P+T ++R+ KR R EE +PL+YL+++H
Sbjct: 164 WFDWILRNMDVSVDLIVYLRTNPETCYQRLKKRCREEEKVIPLEYLEAIH 213
>sp|Q9N0C5|KITM_MACFA Thymidine kinase 2, mitochondrial OS=Macaca fascicularis GN=TK2
PE=2 SV=1
Length = 265
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 73/110 (66%)
Query: 2 RWNFSFQHYVQLTRLQMQTKVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQEFLAMSE 61
RW + Q YVQLT L T V+L ERS+ + R+ FVE G + + +++ +SE
Sbjct: 104 RWGLTLQTYVQLTMLDRHTCPQVSSVRLMERSIHSARYIFVENLYRSGKMPEVDYVVLSE 163
Query: 62 WYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
W+DW+ NMD+ +DLIVYLR+ P+T ++R+ +R R EE +PL+YL+++H
Sbjct: 164 WFDWILRNMDVSIDLIVYLRTNPETCYQRLKRRCREEEKVIPLEYLEAIH 213
>sp|Q9R088|KITM_MOUSE Thymidine kinase 2, mitochondrial OS=Mus musculus GN=Tk2 PE=1 SV=2
Length = 270
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (63%)
Query: 2 RWNFSFQHYVQLTRLQMQTKVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQEFLAMSE 61
RW + Q YVQLT L T+ V+L ERS+ + R+ FVE G + + ++ +SE
Sbjct: 109 RWGLTLQTYVQLTMLDQHTRPQMSPVRLMERSIYSARYIFVENLYRGGKMPEVDYAILSE 168
Query: 62 WYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
W+DW+ N+D+ +DLIVYLR+ P+ ++R+ R R EE +P++YL ++H
Sbjct: 169 WFDWIVRNIDVSVDLIVYLRTTPEICYQRLKMRCREEEKVIPMEYLHAIH 218
>sp|Q3MHR2|DCK_BOVIN Deoxycytidine kinase OS=Bos taurus GN=DCK PE=2 SV=1
Length = 260
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 2 RWNFSFQHYVQLTRLQMQT-------KVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQ 54
RW+F+FQ Y L+R++ Q K +K V FERS+ ++R+ F +++
Sbjct: 91 RWSFTFQSYACLSRIRAQLAALNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNET 150
Query: 55 EFLAMSEWYDWVEN--NMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
E+ +W+DW+ N + LD I+YLR+ P+ R+ R R EE +PL+YL+ LH
Sbjct: 151 EWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLH 209
>sp|P27707|DCK_HUMAN Deoxycytidine kinase OS=Homo sapiens GN=DCK PE=1 SV=1
Length = 260
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 2 RWNFSFQHYVQLTRLQMQT-------KVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQ 54
RW+F+FQ Y L+R++ Q K +K V FERS+ ++R+ F +++
Sbjct: 91 RWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNET 150
Query: 55 EFLAMSEWYDWVEN--NMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
E+ +W+DW+ N + LD I+YL++ P+T R+ R R EE +PL+YL+ LH
Sbjct: 151 EWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLH 209
>sp|P43346|DCK_MOUSE Deoxycytidine kinase OS=Mus musculus GN=Dck PE=1 SV=1
Length = 260
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 2 RWNFSFQHYVQLTRLQMQT-------KVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQ 54
RW+F+FQ Y L+R++ Q K +K V FERS+ ++R+ F +++
Sbjct: 91 RWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNET 150
Query: 55 EFLAMSEWYDWVEN--NMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
E+ +W+DW+ + + LD I+YLR+ P+ R+ R R EE +PL+YL+ LH
Sbjct: 151 EWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLH 209
>sp|P48769|DCK_RAT Deoxycytidine kinase OS=Rattus norvegicus GN=Dck PE=2 SV=1
Length = 260
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 2 RWNFSFQHYVQLTRLQMQT-------KVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQ 54
RW+F FQ Y L+R++ Q + +K V FERS+ ++R+ F +++
Sbjct: 91 RWSFIFQSYACLSRIRAQLASLNGSLRDAEKPVLFFERSVYSDRYIFASNLYESDCMNET 150
Query: 55 EFLAMSEWYDWVEN--NMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
E+ +W+DW+ + + LD I+YLR+ P+ R+ R R EE +PL+YL+ LH
Sbjct: 151 EWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYIRGRDEEQGIPLEYLEKLH 209
>sp|Q9J579|DCK2_FOWPN Probable deoxycytidine kinase FPV151 OS=Fowlpox virus (strain NVSL)
GN=FPV151 PE=3 SV=1
Length = 235
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 2 RWNFSFQHYVQLTRLQMQTKVTDKKVQ--LFERSLQNNRFCFVEMARAQGFLSKQEFLAM 59
RW ++FQ + TR + +K + ERS+ ++++ F G++ E+
Sbjct: 73 RWAYTFQSHAFWTRTKTYIDALNKNKGNIILERSVFSDKYIFATALHDIGYIDDTEWNIY 132
Query: 60 SEWYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLHE 112
+E+ W+ MDI +D I+YL++ P ++RML R R EEN V +DYL LH+
Sbjct: 133 NEYSKWMTEFMDIKIDGIIYLKTSPDICYKRMLNRARHEENTVKIDYLNLLHD 185
>sp|P21974|DCK1_FOWPN Probable deoxycytidine kinase FPV059 OS=Fowlpox virus (strain NVSL)
GN=FPV059 PE=3 SV=1
Length = 219
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Query: 2 RWNFSFQHYVQLTRLQMQTKV-TDKKVQLFERSLQNNRFCFVEMARAQGFLSKQEFLAMS 60
RW+++ Q + + R++M + +V + ERS+ ++R+ F E A A G++ E+
Sbjct: 62 RWSYALQTHYCMKRVRMHLECFVPSRVNILERSIFSDRYVFAEAATALGYMDDPEWALYC 121
Query: 61 EWYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENC--VPLDYLQSLHE 112
+ +DW + ++I D I+YLR+ P++ ER+ +++ E+N + +DYL++LHE
Sbjct: 122 KQHDWYTDKLEIQFDGIIYLRTIPESCKERINEKSITEKNYPNISIDYLKTLHE 175
>sp|Q16854|DGUOK_HUMAN Deoxyguanosine kinase, mitochondrial OS=Homo sapiens GN=DGUOK PE=1
SV=2
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 2 RWNFSFQHYVQLTRLQMQTKV-------TDKKVQLFERSLQNNRFCFVEMARAQGFLSKQ 54
RW+++FQ + L+RL++Q + K VQ+FERS+ ++R+ F + G LS
Sbjct: 105 RWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDI 164
Query: 55 EFLAMSEWYDWV--ENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
E+ +W+ ++ E I L +YL++ P+ +R+ +R R EE + L YL+ LH
Sbjct: 165 EWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELAYLEQLH 223
>sp|Q9QX60|DGUOK_MOUSE Deoxyguanosine kinase, mitochondrial OS=Mus musculus GN=Dguok PE=2
SV=3
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 2 RWNFSFQHYVQLTRLQMQTKV-------TDKKVQLFERSLQNNRFCFVEMARAQGFLSKQ 54
RW+++FQ ++RL++Q + +K V++FERS+ ++R+ F + G LS
Sbjct: 105 RWSYTFQTLSFMSRLKVQLEPIPGRLLQAEKSVRVFERSVYSDRYIFAKNLFENGSLSDI 164
Query: 55 EFLAMSEWYDWV--ENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
E+ +W+ ++ E + L +YL++ P+ ER+ +R+R EE + L YLQ LH
Sbjct: 165 EWHIYQDWHSFLLQEFANRLLLHGFIYLQASPQVCMERLYQRDREEEKGIELAYLQQLH 223
>sp|Q6GZP0|DNK_FRG3G Putative deoxynucleoside kinase OS=Frog virus 3 (isolate Goorha)
GN=FV3-085R PE=4 SV=1
Length = 195
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 2 RWNFSFQHYVQL--TRLQMQTKVTDKKVQLFERSLQNN-RFCFVEMARAQGFLSKQEFLA 58
RW FS Q + L + +Q K +D +V + ER+ + FC V M + Q ++ + L
Sbjct: 52 RWKFSSQLKIMLIQSEIQRAAKKSDNRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLV 111
Query: 59 MSEWYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
+ +++ +D ++L + P+ ER+ R R E +P++YL SLH
Sbjct: 112 Q------IWEKVNVPVDAKIFLNTPPEKCMERIAFRGRAFERDIPVEYLSSLH 158
>sp|Q197D1|VF143_IIV3 Putative kinase protein 029R OS=Invertebrate iridescent virus 3
GN=IIV3-029R PE=3 SV=1
Length = 193
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 2 RWNFSFQHYVQLTRLQMQTKVTD-KKVQLFERSLQNNRFCFVEMARAQGFLSKQEFLAMS 60
R+ FQ V + ++ + + + V + ER ++R F +M GF+S QE+
Sbjct: 48 RYASPFQFQVLFSFHKLYSTIKNVNDVVILERCPWSSRNIFTKMLVQDGFISPQEYELYM 107
Query: 61 EWYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLH 111
+YD + +L +YL+ P +R+LKRNR E + DYL L+
Sbjct: 108 SFYD----RLAFTTNLHIYLKVDPTVAFDRILKRNREAEKTLQYDYLVRLN 154
>sp|P46452|GMHB_HAEIN D,D-heptose 1,7-bisphosphate phosphatase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=gmhB PE=3 SV=1
Length = 184
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 47 AQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
A+G+ S+ +FL ++EW DW D+ LD I Y CP
Sbjct: 56 ARGYFSEDQFLQLTEWMDWSLAEQDVDLDGIYY---CP 90
>sp|Q54UT2|DGK_DICDI Deoxyguanosine kinase OS=Dictyostelium discoideum GN=dgk PE=1 SV=2
Length = 285
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 18 MQTKVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQEFLAMSEWYDWVENNMDIGLDLI 77
+Q + +++ + +RS+ ++ + F E R++G +S + F + D +N+ I ++
Sbjct: 101 LQYSLENEQGVILDRSVYSD-WVFAENCRSEGLISAEGFKEYNSIRDRFLSNIPIP-NVT 158
Query: 78 VYLRSCPKTVHERMLKRNRPEENCVPLDYLQSL 110
++L PK +R+ R R E +PL YL L
Sbjct: 159 LFLDVDPKQCLQRIQNRKRDCEQSIPLSYLSGL 191
>sp|Q54YL2|DAK_DICDI Deoxyadenosine kinase OS=Dictyostelium discoideum GN=dak PE=1 SV=1
Length = 245
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 40 CFVEMARAQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEE 99
F +M G L +++ + + + N M DLI++L P+ ER+ RNR E
Sbjct: 107 VFAKMLNESGLLDDRDYNTYCKLFQNLSNFMRRP-DLIIHLDVSPEKSLERIKLRNRDCE 165
Query: 100 NCVPLDYLQSLHES 113
V L+YLQ+L+ +
Sbjct: 166 KDVSLEYLQNLYNA 179
>sp|Q9CK98|GMHB_PASMU D,D-heptose 1,7-bisphosphate phosphatase OS=Pasteurella multocida
(strain Pm70) GN=gmhB PE=3 SV=1
Length = 184
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 47 AQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
A+G+ S+ +FL ++EW DW + + LD I Y CP
Sbjct: 56 ARGYFSEDQFLQLTEWMDWSLADRGVDLDGIYY---CP 90
>sp|Q7N8M1|GMHB1_PHOLL D,D-heptose 1,7-bisphosphate phosphatase 1 OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=gmhB1 PE=3
SV=1
Length = 188
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 47 AQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCPKTVHER 90
A+G +++FL ++EW DW + + LD I Y P E+
Sbjct: 59 ARGIFDEEQFLQLTEWMDWSLADRGVDLDGIYYCPHHPDATEEQ 102
>sp|Q7VL21|GMHB_HAEDU D,D-heptose 1,7-bisphosphate phosphatase OS=Haemophilus ducreyi
(strain 35000HP / ATCC 700724) GN=gmhB PE=3 SV=1
Length = 182
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 32 RSLQNNRFCFV----EMARAQGFLSKQEFLAMSEWYDW-VENNMDIGLDLIVYLRSCP 84
+ LQ+ + V + A+G+ S+Q+F ++EW DW ++ + + LD I Y CP
Sbjct: 38 KQLQDKGYLLVLVTNQSGIARGYFSEQQFQQLTEWMDWSLDEDYGVVLDGIYY---CP 92
>sp|Q8ZH37|GMHB_YERPE D,D-heptose 1,7-bisphosphate phosphatase OS=Yersinia pestis
GN=gmhB PE=3 SV=1
Length = 188
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 32 RSLQNNRFCFV----EMARAQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
R L+ F V + A+G ++++FL+++EW DW + + LD I + CP
Sbjct: 40 RELKEMGFALVLVTNQSGIARGMFTEEQFLSLTEWMDWSLADRGVDLDGIYF---CP 93
>sp|Q8FKZ1|GMHB_ECOL6 D,D-heptose 1,7-bisphosphate phosphatase OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=gmhB PE=3
SV=1
Length = 190
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 32 RSLQNNRFCFV----EMARAQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
R L+ F V + A+G ++ +F ++EW DW + D+ LD I Y CP
Sbjct: 40 RELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYY---CP 93
>sp|P63230|GMHB_SHIFL D,D-heptose 1,7-bisphosphate phosphatase OS=Shigella flexneri
GN=gmhB PE=3 SV=1
Length = 191
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 32 RSLQNNRFCFV----EMARAQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
R L+ F V + A+G ++ +F ++EW DW + D+ LD I Y CP
Sbjct: 40 RELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYY---CP 93
>sp|P63228|GMHB_ECOLI D,D-heptose 1,7-bisphosphate phosphatase OS=Escherichia coli
(strain K12) GN=gmhB PE=1 SV=1
Length = 191
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 32 RSLQNNRFCFV----EMARAQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
R L+ F V + A+G ++ +F ++EW DW + D+ LD I Y CP
Sbjct: 40 RELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYY---CP 93
>sp|P63229|GMHB_ECO57 D,D-heptose 1,7-bisphosphate phosphatase OS=Escherichia coli
O157:H7 GN=gmhB PE=3 SV=1
Length = 191
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 32 RSLQNNRFCFV----EMARAQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
R L+ F V + A+G ++ +F ++EW DW + D+ LD I Y CP
Sbjct: 40 RELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYY---CP 93
>sp|Q8Z989|GMHB_SALTI D,D-heptose 1,7-bisphosphate phosphatase OS=Salmonella typhi
GN=gmhB PE=3 SV=1
Length = 188
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 47 AQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
A+G ++ +F ++EW DW + D+ LD I Y CP
Sbjct: 59 ARGKFTEAQFETLTEWMDWSLADRDVDLDGIYY---CP 93
>sp|Q8ZRM8|GMHB_SALTY D,D-heptose 1,7-bisphosphate phosphatase OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=gmhB PE=3 SV=1
Length = 188
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 47 AQGFLSKQEFLAMSEWYDWVENNMDIGLDLIVYLRSCP 84
A+G ++ +F ++EW DW + D+ LD I Y CP
Sbjct: 59 ARGKFTEAQFETLTEWMDWSLADRDVDLDGIYY---CP 93
>sp|Q973E9|Y950_SULTO UPF0200 protein STK_09500 OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=STK_09500 PE=3 SV=2
Length = 177
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 51 LSKQEFLAMSEWYDW--VENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEEN 100
+ K+E +A +W +E IG I+ + S PK +ER+LKR R ++
Sbjct: 76 IGKEEIVAFDGVRNWEEIEEFKKIGNVTIIAVHSPPKLRYERLLKRGRKDDT 127
>sp|P28855|KITH_ICHVA Thymidine kinase OS=Ictalurid herpesvirus 1 (strain Auburn) GN=TK
PE=3 SV=1
Length = 228
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 4 NFSFQHYVQLTRLQMQTKVTDKKVQLFERSLQNNRFCFVEMARAQGFLSKQEFLAMSEWY 63
N F YV + RLQ + ERS + F + ++G + M+
Sbjct: 80 NLVFDSYVNVQRLQ--------NPDIMERSPMSATRVFCAVNGSRGVIPATALPGMAARG 131
Query: 64 DWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSLHE 112
+ V + + VYL P+ RM +R+R E V LDYL+ LHE
Sbjct: 132 EAVMRTIAT-RPVFVYLELPPEECLRRMRRRDRTGEAGVGLDYLRLLHE 179
>sp|Q7MPW9|KGUA_VIBVY Guanylate kinase OS=Vibrio vulnificus (strain YJ016) GN=gmk PE=3
SV=1
Length = 207
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 39 FCFVEMARAQGFLSKQEFLAMSEWYD--------WVENNMDIGLDLIV 78
+ FVE + ++K EFL +E + W+EN +D G+D+ +
Sbjct: 54 YHFVEKEHFEDLITKGEFLEYAEVFGNYYGTSRVWIENTLDKGIDVFL 101
>sp|Q8DDV6|KGUA_VIBVU Guanylate kinase OS=Vibrio vulnificus (strain CMCP6) GN=gmk PE=3
SV=1
Length = 207
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 39 FCFVEMARAQGFLSKQEFLAMSEWYD--------WVENNMDIGLDLIV 78
+ FVE + ++K EFL +E + W+EN +D G+D+ +
Sbjct: 54 YHFVEKEHFEDLITKGEFLEYAEVFGNYYGTSRVWIENTLDKGIDVFL 101
>sp|O55749|VF143_IIV6 Putative kinase protein 143R OS=Invertebrate iridescent virus 6
GN=IIV6-143R PE=3 SV=1
Length = 195
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 57 LAMSEWYDWVENNMDIGLDLIVYLRSCPKTVHERMLKRNRPEENCVPLDYLQSL 110
L+ + Y+ + + +D +Y++ + ER+ KR+R E + DYL+SL
Sbjct: 100 LSAIDTYNNLYERLSYQVDHFIYIKVDSEMAFERIKKRDRFAEQNISFDYLKSL 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.134 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,138,717
Number of Sequences: 539616
Number of extensions: 1328234
Number of successful extensions: 3657
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3612
Number of HSP's gapped (non-prelim): 37
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)