BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16746
(247 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2X7B|A Chain A, Crystal Structure Of The N-Terminal Acetylase Ard1 From
Sulfolobus Solfataricus P2
Length = 168
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 2 NSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYT 61
N+R D ++ L NYP ++ + E A+ + ++G I+ I
Sbjct: 17 NARMDDID-QIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGF 75
Query: 62 SLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAI 121
S K+ L S K G+++S+ V E+YRR GIA+ LL+ + + N+ + I
Sbjct: 76 SNIKQ----LPSLVRK----GHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNA--EEI 125
Query: 122 FLHVLTSNKPAIHFYEKRRFRLHSFLPYYYS 152
+L V SN PAI YEK F+ L YY+
Sbjct: 126 YLEVRVSNYPAIALYEKLNFKKVKVLKGYYA 156
>pdb|3LD2|A Chain A, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|B Chain B, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|C Chain C, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|D Chain D, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
Length = 197
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 86 SLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145
+ V+E RR GI L+ ++ + S + + +HVL+SN+ A+ FY+K F L +
Sbjct: 114 GIAVAEKERRKGIGRALVQIFLNEV----KSDYQKVLIHVLSSNQEAVLFYKKLGFDLEA 169
Query: 146 FLPYYYSIKGRSRDGFTY 163
L + +KG+ D Y
Sbjct: 170 RLTKQFFLKGQYVDDLIY 187
>pdb|3TFY|A Chain A, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
pdb|3TFY|B Chain B, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
pdb|3TFY|C Chain C, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
Length = 169
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
YI++LG YRR GI + +L+++++ ++ + I+LHV SN+ AI FY K F
Sbjct: 73 YIMTLGCLAPYRRLGIGTKMLNHVLN--ICEKDGTFDNIYLHVQISNESAIDFYRKFGFE 130
Query: 143 LHSFLPYYYS 152
+ YY
Sbjct: 131 IIETKKNYYK 140
>pdb|2CNM|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNS|A Chain A, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|B Chain B, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|C Chain C, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNT|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|D Chain D, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea
Length = 160
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
++ + ++ V D++R G+ +LL++LI L E ++L V SN AI YE
Sbjct: 61 LDEATLFNIAVDPDFQRRGLGRMLLEHLIDEL---ETRGVVTLWLEVRASNAAAIALYES 117
Query: 139 RRFRLHSFLPYYYSIKGRSRDGFTYVLYIN 168
F + YY D L I+
Sbjct: 118 LGFNEATIRRNYYPTAQGHEDAIIMALPIS 147
>pdb|3JVN|A Chain A, Crystal Structure Of The Acetyltransferase Vf_1542 From
Vibrio Fischeri, Northeast Structural Genomics
Consortium Target Vfr136
Length = 166
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 14/111 (12%)
Query: 34 SEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDY 93
+P A + VIIG I + L S+ K + I L + ++Y
Sbjct: 52 DDPECXVYVAEXDDVIIGFITGHFCE-----------LISTVSKLVXXATIDELYIEKEY 100
Query: 94 RRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLH 144
RR G+A L + L + K IF+ V NK A+ FY K+ H
Sbjct: 101 RREGVAEQLXXRIEQELK---DYGVKEIFVEVWDFNKGALEFYNKQGLNEH 148
>pdb|2OB0|A Chain A, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2OB0|B Chain B, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2OB0|C Chain C, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2PSW|A Chain A, Human Mak3 Homolog In Complex With Coa
pdb|2PSW|B Chain B, Human Mak3 Homolog In Complex With Coa
pdb|2PSW|C Chain C, Human Mak3 Homolog In Complex With Coa
Length = 170
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
YI +LG YRR GI + L+++++ ++ + I+LHV SN+ AI FY K F
Sbjct: 74 YIXTLGCLAPYRRLGIGTKXLNHVLN--ICEKDGTFDNIYLHVQISNESAIDFYRKFGFE 131
Query: 143 LHSFLPYYY 151
+ YY
Sbjct: 132 IIETKKNYY 140
>pdb|1BO4|A Chain A, Crystal Structure Of A Gcn5-Related N-Acetyltransferase:
Serratia Marescens Aminoglycoside 3-N-Acetyltransferase
pdb|1BO4|B Chain B, Crystal Structure Of A Gcn5-Related N-Acetyltransferase:
Serratia Marescens Aminoglycoside 3-N-Acetyltransferase
Length = 168
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 37 SFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRN 96
+F +LAA ++G + A +L F++ YI L VS ++RR
Sbjct: 75 TFIALAAFDQEAVVGALAAYVL--------------PKFEQPRSEIYIYDLAVSGEHRRQ 120
Query: 97 GIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
GIA+ L+ NL+ H A + I++ + PA+ Y K R
Sbjct: 121 GIATALI-NLLKHEANALGAYV--IYVQADYGDDPAVALYTKLGIR 163
>pdb|3BJ7|A Chain A, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|B Chain B, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|C Chain C, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|D Chain D, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|A Chain A, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|B Chain B, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|C Chain C, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|D Chain D, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
Length = 171
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
Y+ V DYR GI S +L NL A C ++ V N+P+I+FY++R
Sbjct: 90 YLEDFFVMSDYRGFGIGSEILKNLSQ---VAMKCRCSSMHFLVAEWNEPSINFYKRR 143
>pdb|2FXF|A Chain A, Human SpermidineSPERMINE N1-Acetyltransferase
pdb|2FXF|B Chain B, Human SpermidineSPERMINE N1-Acetyltransferase
Length = 170
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
Y+ V DYR GI S +L NL A C ++ V N+P+I+FY++R
Sbjct: 89 YLEDFFVMSDYRGFGIGSEILKNLSQ---VAMRCRCSSMHFLVAEWNEPSINFYKRR 142
>pdb|2JEV|A Chain A, Crystal Structure Of Human Spermine,Spermidine
Acetyltransferase In Complex With A Bisubstrate Analog
(N1- Acetylspermine-S-Coa).
pdb|2JEV|B Chain B, Crystal Structure Of Human Spermine,Spermidine
Acetyltransferase In Complex With A Bisubstrate Analog
(N1- Acetylspermine-S-Coa)
Length = 174
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
Y+ V DYR GI S +L NL A C ++ V N+P+I+FY++R
Sbjct: 93 YLEDFFVMSDYRGFGIGSEILKNLSQ---VAMRCRCSSMHFLVAEWNEPSINFYKRR 146
>pdb|2F5I|A Chain A, X-Ray Structure Of SpermidineSPERMINE N1-Acetyltransferase
(Sat) From Homo Sapiens
pdb|2F5I|B Chain B, X-Ray Structure Of SpermidineSPERMINE N1-Acetyltransferase
(Sat) From Homo Sapiens
pdb|2G3T|A Chain A, Crsytal Structure Of Human SpermidineSPERMINE N1-
Acetyltransferase (Hssat)
pdb|2G3T|B Chain B, Crsytal Structure Of Human SpermidineSPERMINE N1-
Acetyltransferase (Hssat)
Length = 179
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
Y+ V DYR GI S +L NL A C ++ V N+P+I+FY++R
Sbjct: 90 YLEDFFVMSDYRGFGIGSEILKNLSQ---VAMRCRCSSMHFLVAEWNEPSINFYKRR 143
>pdb|2B4D|A Chain A, Ssat+coa+sp- Sp Disordered
pdb|2B5G|A Chain A, Wild Type Ssat- 1.7a Structure
Length = 171
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
Y+ V DYR GI S +L NL A C + V N+P+I+FY++R
Sbjct: 90 YLEDFFVXSDYRGFGIGSEILKNLSQ---VAXRCRCSSXHFLVAEWNEPSINFYKRR 143
>pdb|2B3U|A Chain A, Human Spermine Spermidine Acetyltransferase K26r Mutant
pdb|2B3U|B Chain B, Human Spermine Spermidine Acetyltransferase K26r Mutant
pdb|2B3V|A Chain A, Spermine Spermidine Acetyltransferase In Complex With
Acetylcoa, K26r Mutant
pdb|2B4B|A Chain A, Ssat+coa+be-3-3-3, K6r Mutant
pdb|2B4B|B Chain B, Ssat+coa+be-3-3-3, K6r Mutant
pdb|2B58|A Chain A, Ssat With Coa_sp, Spermine Disordered, K26r Mutant
Length = 171
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
Y+ V DYR GI S +L NL A C + V N+P+I+FY++R
Sbjct: 90 YLEDFFVXSDYRGFGIGSEILKNLSQ---VAXRCRCSSXHFLVAEWNEPSINFYKRR 143
>pdb|2B4D|B Chain B, Ssat+coa+sp- Sp Disordered
pdb|2B5G|B Chain B, Wild Type Ssat- 1.7a Structure
Length = 171
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
Y+ V DYR GI S +L NL A C + V N+P+I+FY++R
Sbjct: 90 YLEDFFVXSDYRGFGIGSEILKNLSQ---VAXRCRCSSXHFLVAEWNEPSINFYKRR 143
>pdb|3EG7|A Chain A, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|B Chain B, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|C Chain C, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|D Chain D, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|E Chain E, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|F Chain F, Spermidine N1-Acetyltransferase From Vibrio Cholerae
Length = 176
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 79 IEVGYI-----LSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAI 133
IE+ YI + ++ +++ G A L++ + + T N I+LHV N A+
Sbjct: 77 IEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILN--LHKIYLHVAVENPKAV 134
Query: 134 HFYEKRRFRLHSFLPYYYSIKGRSRD 159
H YE+ F L + I GR +D
Sbjct: 135 HLYEECGFVEEGHLVEEFFINGRYQD 160
>pdb|3FB3|A Chain A, Crystal Structure Of Trypanosoma Brucei Acetyltransferase,
Tb11.01.2886
pdb|3FB3|B Chain B, Crystal Structure Of Trypanosoma Brucei Acetyltransferase,
Tb11.01.2886
pdb|3I3G|A Chain A, Crystal Structure Of Trypanosoma Brucei
N-Acetyltransferase (Tb11.01.2886) At 1.86a
pdb|3I3G|B Chain B, Crystal Structure Of Trypanosoma Brucei
N-Acetyltransferase (Tb11.01.2886) At 1.86a
Length = 161
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRR 140
VG+I + V YR G+ L+ +L E S K + +L S++ ++ FYEK
Sbjct: 96 VGHIEDVVVDPSYRGAGLGKALIMDL------CEISRSKGCYKVILDSSEKSLPFYEKLG 149
Query: 141 FRLH 144
FR H
Sbjct: 150 FRAH 153
>pdb|2I79|A Chain A, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|B Chain B, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|C Chain C, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|D Chain D, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|E Chain E, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|F Chain F, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
Length = 172
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 63 LNKEDKDILASSFDKHIEVGYI--LSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKA 120
LN + I+ + D+ V +I L + + + Y NG+ SLLL+ I + +
Sbjct: 66 LNGKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQAS--GILRR 123
Query: 121 IFLHVLTSNKPAIHFYEKRRF 141
+ L V T N+ A+H Y+K F
Sbjct: 124 LQLTVQTRNQAAVHLYQKHGF 144
>pdb|2VI7|A Chain A, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|B Chain B, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|C Chain C, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
Length = 177
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 32/150 (21%)
Query: 34 SEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDK--------------------DILAS 73
SE L ALYN + V + + Y S+ + K D++ S
Sbjct: 14 SERHVEGLTALYNDPAVARQVLQ-MPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGS 72
Query: 74 -SFDKHIEV-----GYILSLGVSEDYRRNGIASLLLDNLISHLTTAEN-SSCKAIFLHVL 126
S ++H + G I +GV+ ++ G+ S LL L L A+N + + + L V
Sbjct: 73 ASLEQHPRIRRSHSGSI-GMGVAVAWQGKGVGSRLLGEL---LDIADNWMNLRRVELTVY 128
Query: 127 TSNKPAIHFYEKRRFRLHSFLPYYYSIKGR 156
T N PA+ Y K F + Y GR
Sbjct: 129 TDNAPALALYRKFGFETEGEMRDYAVRDGR 158
>pdb|1VHS|A Chain A, Crystal Structure Of A Putative Phosphinothricin N-
Acetyltransferase
pdb|1VHS|B Chain B, Crystal Structure Of A Putative Phosphinothricin N-
Acetyltransferase
Length = 175
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAI 133
+++K EV S+ + E R G+ S LL L A N +++ + NKP++
Sbjct: 78 AYNKTAEV----SIYIDEACRGKGVGSYLLQEA---LRIAPNLGIRSLXAFIFGHNKPSL 130
Query: 134 HFYEKRRFRLHSFLPYYYSIKGRSRD 159
+EK F P G+ D
Sbjct: 131 KLFEKHGFAEWGLFPGIAEXDGKRYD 156
>pdb|1I1D|A Chain A, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|B Chain B, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|C Chain C, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|D Chain D, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
Length = 161
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 56 EILQYTSLNKEDK--DILASSFDKHIE---------VGYILSLGVSEDYRRNGIASLLLD 104
+I+QY + DK + +A++ + IE G+I + V+ Y+ G+ LL+D
Sbjct: 60 KIMQYNPMVIVDKRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLID 119
Query: 105 NLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
L+ T + C I +L ++ + FYEK F
Sbjct: 120 QLV---TIGFDYGCYKI---ILDCDEKNVKFYEKCGF 150
>pdb|1I12|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
Length = 160
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
G+I + V+ Y+ G+ LL+D L+ T + C I +L ++ + FYEK F
Sbjct: 96 GHIEDIAVNSKYQGQGLGKLLIDQLV---TIGFDYGCYKI---ILDCDEKNVKFYEKCGF 149
>pdb|1I21|A Chain A, Crystal Structure Of Yeast Gna1
pdb|1I21|B Chain B, Crystal Structure Of Yeast Gna1
pdb|1I21|M Chain M, Crystal Structure Of Yeast Gna1
pdb|1I21|N Chain N, Crystal Structure Of Yeast Gna1
pdb|1I21|X Chain X, Crystal Structure Of Yeast Gna1
pdb|1I21|Y Chain Y, Crystal Structure Of Yeast Gna1
Length = 159
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
G+I + V+ Y+ G+ LL+D L+ T + C I +L ++ + FYEK F
Sbjct: 95 GHIEDIAVNSKYQGQGLGKLLIDQLV---TIGFDYGCYKI---ILDCDEKNVKFYEKCGF 148
>pdb|2PDO|A Chain A, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|B Chain B, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|C Chain C, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|D Chain D, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|E Chain E, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|F Chain F, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|G Chain G, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|H Chain H, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
Length = 144
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
LGV ++R GIA+ LL+ L L C I ++V N + YE+
Sbjct: 75 LGVHPEFRGRGIANALLNRLEKKLIA---RGCPKIQINVPEDNDXVLGXYER 123
>pdb|2X5Q|A Chain A, Crystal Structure Of Hypothetical Protein Sso1986 From
Sulfolobus Solfataricus P2
pdb|2X5Q|B Chain B, Crystal Structure Of Hypothetical Protein Sso1986 From
Sulfolobus Solfataricus P2
Length = 198
Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 4 RSPDYQANVLTSTSLRH--SGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQ-- 59
R D N+ S +++ +G Y + +TS F SL I+ ++A+I
Sbjct: 110 RKKDVHGNITFSLPIKNFNTGTYQVDLRDKVTS---FVSLDRDVAKTIVDNVLAKIYAKI 166
Query: 60 YTSLNKEDKDIL 71
Y SLNKE KD L
Sbjct: 167 YNSLNKEQKDKL 178
>pdb|4HCJ|A Chain A, Crystal Structure Of ThijPFPI DOMAIN PROTEIN FROM
BRACHYSPIRA Murdochii
Length = 177
Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 69 DILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDN 105
++ A FD + VG I + + +D+R G+A L LDN
Sbjct: 64 EVDAVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDN 100
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,755,922
Number of Sequences: 62578
Number of extensions: 323843
Number of successful extensions: 768
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 757
Number of HSP's gapped (non-prelim): 27
length of query: 247
length of database: 14,973,337
effective HSP length: 96
effective length of query: 151
effective length of database: 8,965,849
effective search space: 1353843199
effective search space used: 1353843199
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)