Query psy16746
Match_columns 247
No_of_seqs 222 out of 2216
Neff 8.3
Searched_HMMs 46136
Date Fri Aug 16 20:56:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16746.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16746hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10140 putative acetyltransf 99.8 5.7E-19 1.2E-23 140.0 17.6 147 1-165 6-160 (162)
2 PRK09491 rimI ribosomal-protei 99.8 1.5E-18 3.2E-23 136.0 16.8 142 1-167 4-146 (146)
3 TIGR03827 GNAT_ablB putative b 99.8 1.7E-18 3.6E-23 149.4 14.1 145 1-167 118-266 (266)
4 TIGR01575 rimI ribosomal-prote 99.8 3.3E-18 7.1E-23 130.4 14.2 130 8-162 1-130 (131)
5 KOG3139|consensus 99.8 1.7E-17 3.6E-22 129.0 15.7 141 5-167 23-164 (165)
6 PF13420 Acetyltransf_4: Acety 99.8 1.5E-17 3.1E-22 131.3 14.7 142 1-162 1-155 (155)
7 PRK10146 aminoalkylphosphonic 99.8 5.4E-18 1.2E-22 132.0 12.0 128 1-145 6-137 (144)
8 PRK10809 ribosomal-protein-S5- 99.8 4E-17 8.7E-22 134.0 17.0 148 1-167 20-187 (194)
9 PRK15130 spermidine N1-acetylt 99.8 6.5E-17 1.4E-21 131.8 17.7 148 1-168 9-167 (186)
10 PRK10151 ribosomal-protein-L7/ 99.7 1.5E-16 3.2E-21 128.9 18.1 148 1-168 13-177 (179)
11 TIGR03585 PseH pseudaminic aci 99.7 1E-16 2.2E-21 126.4 15.8 142 1-163 3-155 (156)
12 KOG3138|consensus 99.7 9.8E-18 2.1E-22 135.3 9.0 162 1-176 19-182 (187)
13 COG0456 RimI Acetyltransferase 99.7 8.6E-17 1.9E-21 129.4 14.1 137 1-154 14-162 (177)
14 PRK03624 putative acetyltransf 99.7 7.1E-17 1.5E-21 124.2 12.3 124 1-147 5-131 (140)
15 COG1247 Sortase and related ac 99.7 2.4E-16 5.3E-21 125.6 15.6 152 1-170 4-167 (169)
16 TIGR02406 ectoine_EctA L-2,4-d 99.7 1.7E-16 3.6E-21 126.4 13.2 126 1-147 1-129 (157)
17 TIGR02382 wecD_rffC TDP-D-fuco 99.7 4.2E-16 9.2E-21 127.9 14.2 126 1-148 46-187 (191)
18 PF00583 Acetyltransf_1: Acety 99.7 1.1E-15 2.4E-20 107.7 12.2 83 43-142 1-83 (83)
19 PHA00673 acetyltransferase dom 99.7 1.4E-15 3E-20 119.6 13.5 126 3-146 11-146 (154)
20 KOG3235|consensus 99.7 8.9E-16 1.9E-20 118.7 11.4 149 1-168 4-154 (193)
21 PRK10975 TDP-fucosamine acetyl 99.7 1.4E-15 3.1E-20 125.0 13.5 126 1-148 49-190 (194)
22 PTZ00330 acetyltransferase; Pr 99.7 2.5E-15 5.4E-20 117.3 13.2 127 1-146 9-141 (147)
23 PRK09831 putative acyltransfer 99.6 6.4E-15 1.4E-19 115.7 13.0 128 1-165 3-143 (147)
24 PF13523 Acetyltransf_8: Acety 99.6 1.7E-14 3.6E-19 113.7 14.9 133 1-148 1-143 (152)
25 PLN02706 glucosamine 6-phospha 99.6 1E-14 2.2E-19 114.6 13.3 127 1-146 9-144 (150)
26 PF13527 Acetyltransf_9: Acety 99.6 5.2E-15 1.1E-19 112.8 9.9 122 1-144 2-127 (127)
27 TIGR03103 trio_acet_GNAT GNAT- 99.6 2E-14 4.4E-19 135.3 15.8 132 1-148 85-219 (547)
28 PRK10514 putative acetyltransf 99.6 1.9E-14 4.1E-19 112.3 12.7 131 1-165 4-143 (145)
29 PF13673 Acetyltransf_10: Acet 99.6 3.7E-14 8E-19 106.3 13.7 86 26-141 32-117 (117)
30 KOG3216|consensus 99.6 2.3E-14 5.1E-19 110.4 12.6 129 1-146 6-146 (163)
31 PRK07922 N-acetylglutamate syn 99.6 3E-14 6.4E-19 114.9 12.0 118 1-146 8-127 (169)
32 KOG3234|consensus 99.6 1.5E-14 3.3E-19 111.8 8.9 150 1-170 4-154 (173)
33 PRK07757 acetyltransferase; Pr 99.5 5.4E-14 1.2E-18 110.7 11.2 118 1-146 4-122 (152)
34 PRK10562 putative acetyltransf 99.5 3.3E-13 7.1E-18 105.6 14.4 129 1-165 2-140 (145)
35 TIGR01686 FkbH FkbH-like domai 99.5 1.3E-13 2.8E-18 122.0 13.4 119 1-144 189-319 (320)
36 PLN02825 amino-acid N-acetyltr 99.5 7.1E-14 1.5E-18 129.7 12.0 121 1-146 370-490 (515)
37 PRK05279 N-acetylglutamate syn 99.5 9.3E-14 2E-18 128.0 12.1 121 1-146 297-417 (441)
38 TIGR01890 N-Ac-Glu-synth amino 99.5 1.6E-13 3.5E-18 126.0 12.0 121 1-146 285-405 (429)
39 PF13508 Acetyltransf_7: Acety 99.5 7.3E-13 1.6E-17 93.0 12.6 78 37-143 2-79 (79)
40 TIGR03448 mycothiol_MshD mycot 99.5 4.3E-13 9.4E-18 116.7 14.0 122 7-148 159-290 (292)
41 PRK10314 putative acyltransfer 99.5 3.5E-13 7.6E-18 106.9 11.9 122 2-146 10-134 (153)
42 TIGR03448 mycothiol_MshD mycot 99.5 7.2E-13 1.6E-17 115.3 13.6 120 2-147 4-129 (292)
43 PHA01807 hypothetical protein 99.5 6.1E-13 1.3E-17 105.3 11.3 87 35-139 50-136 (153)
44 PRK12308 bifunctional arginino 99.4 4.5E-13 9.7E-18 128.1 11.1 118 1-147 466-585 (614)
45 COG1246 ArgA N-acetylglutamate 99.4 5.9E-13 1.3E-17 103.6 8.5 117 1-146 3-123 (153)
46 COG1670 RimL Acetyltransferase 99.4 2.7E-12 5.9E-17 103.1 12.8 105 47-169 77-181 (187)
47 PF13302 Acetyltransf_3: Acety 99.4 7.3E-12 1.6E-16 96.8 13.1 122 1-142 4-142 (142)
48 COG3153 Predicted acetyltransf 99.4 1.4E-11 3.1E-16 98.5 13.4 144 1-170 6-153 (171)
49 PRK01346 hypothetical protein; 99.4 8.4E-12 1.8E-16 113.9 13.8 131 1-150 9-140 (411)
50 PRK13688 hypothetical protein; 99.3 1.7E-11 3.7E-16 97.5 11.7 114 2-147 21-134 (156)
51 KOG2488|consensus 99.2 4.1E-11 8.9E-16 95.7 9.0 94 36-148 90-184 (202)
52 KOG3396|consensus 99.2 7.8E-11 1.7E-15 89.2 9.7 89 38-145 53-143 (150)
53 cd02169 Citrate_lyase_ligase C 99.2 8.3E-11 1.8E-15 102.7 10.7 78 38-145 6-83 (297)
54 PF08445 FR47: FR47-like prote 99.2 3.6E-10 7.8E-15 80.9 10.4 61 82-146 22-82 (86)
55 TIGR00124 cit_ly_ligase [citra 99.0 1.7E-09 3.8E-14 95.8 11.2 83 37-149 30-112 (332)
56 COG3393 Predicted acetyltransf 99.0 2E-09 4.4E-14 90.6 10.5 86 42-150 181-266 (268)
57 COG3981 Predicted acetyltransf 98.9 9.6E-09 2.1E-13 81.2 10.0 92 38-147 69-160 (174)
58 KOG3397|consensus 98.9 2.1E-08 4.6E-13 79.2 9.9 120 4-148 20-143 (225)
59 PF13718 GNAT_acetyltr_2: GNAT 98.8 2.9E-07 6.3E-12 75.4 15.5 136 27-168 16-196 (196)
60 KOG4144|consensus 98.7 1.2E-08 2.6E-13 79.0 4.7 137 1-146 14-161 (190)
61 cd04301 NAT_SF N-Acyltransfera 98.7 9E-08 2E-12 62.2 8.1 63 41-123 2-64 (65)
62 PF12746 GNAT_acetyltran: GNAT 98.7 2.8E-07 6E-12 79.1 12.5 92 37-154 164-255 (265)
63 TIGR01211 ELP3 histone acetylt 98.7 1.6E-07 3.4E-12 87.9 11.6 91 39-146 412-516 (522)
64 COG3818 Predicted acetyltransf 98.7 6.5E-08 1.4E-12 73.0 7.1 134 3-147 12-149 (167)
65 COG2153 ElaA Predicted acyltra 98.7 1.8E-07 3.9E-12 72.0 8.7 122 2-146 11-136 (155)
66 PF12568 DUF3749: Acetyltransf 98.6 8.1E-07 1.8E-11 67.3 10.7 112 2-144 8-123 (128)
67 COG1444 Predicted P-loop ATPas 98.5 4.4E-06 9.6E-11 80.5 15.0 157 5-169 438-612 (758)
68 PF14542 Acetyltransf_CG: GCN5 98.4 6E-06 1.3E-10 57.9 9.8 71 41-139 2-72 (78)
69 PF08444 Gly_acyl_tr_C: Aralky 98.4 1.2E-06 2.7E-11 62.3 6.2 61 80-144 18-78 (89)
70 COG4552 Eis Predicted acetyltr 98.1 6.6E-06 1.4E-10 72.1 6.8 121 5-147 5-128 (389)
71 KOG4135|consensus 98.0 1.6E-05 3.4E-10 61.5 6.8 65 80-146 106-170 (185)
72 COG5628 Predicted acetyltransf 98.0 0.00014 3.1E-09 54.2 10.3 90 31-142 30-119 (143)
73 COG2388 Predicted acetyltransf 97.8 9.4E-05 2E-09 54.0 6.7 66 36-123 13-78 (99)
74 PF00765 Autoind_synth: Autoin 97.8 0.00039 8.6E-09 56.6 11.0 138 5-148 6-157 (182)
75 PF13480 Acetyltransf_6: Acety 97.7 0.0013 2.9E-08 50.1 12.8 98 4-124 26-134 (142)
76 COG0454 WecD Histone acetyltra 97.7 5.9E-05 1.3E-09 53.6 4.5 44 87-141 87-130 (156)
77 COG3053 CitC Citrate lyase syn 97.7 0.00032 6.8E-09 60.3 9.0 102 84-212 59-160 (352)
78 COG3375 Uncharacterized conser 97.4 0.0014 3.1E-08 54.2 9.8 130 3-152 8-143 (266)
79 PRK13834 putative autoinducer 97.4 0.0044 9.6E-08 51.5 12.6 137 4-146 13-165 (207)
80 PF01233 NMT: Myristoyl-CoA:pr 97.3 0.0044 9.6E-08 48.9 10.5 103 4-121 32-147 (162)
81 PF06852 DUF1248: Protein of u 97.2 0.022 4.7E-07 46.2 14.0 122 5-146 11-137 (181)
82 TIGR03694 exosort_acyl putativ 97.1 0.0055 1.2E-07 52.1 10.5 135 5-146 15-198 (241)
83 TIGR03827 GNAT_ablB putative b 97.0 0.0099 2.1E-07 51.2 11.3 70 96-175 20-89 (266)
84 KOG3138|consensus 96.9 0.00023 5E-09 57.9 0.1 47 197-243 20-66 (187)
85 PF13880 Acetyltransf_13: ESCO 96.7 0.0022 4.7E-08 43.7 3.8 30 81-110 5-34 (70)
86 TIGR03019 pepcterm_femAB FemAB 96.7 0.021 4.6E-07 50.7 10.7 107 23-152 178-287 (330)
87 PF09390 DUF1999: Protein of u 96.5 0.13 2.9E-06 39.7 12.5 119 2-145 4-140 (161)
88 COG3916 LasI N-acyl-L-homoseri 96.4 0.043 9.2E-07 45.2 10.1 139 3-147 11-164 (209)
89 COG3882 FkbH Predicted enzyme 96.4 0.013 2.7E-07 54.0 7.6 120 4-146 419-550 (574)
90 PF05301 Mec-17: Touch recepto 96.3 0.049 1.1E-06 40.9 8.8 52 82-139 47-98 (120)
91 cd04264 DUF619-NAGS DUF619 dom 96.1 0.038 8.2E-07 40.4 7.4 67 41-132 11-77 (99)
92 COG1243 ELP3 Histone acetyltra 95.9 0.0099 2.1E-07 54.4 4.4 103 36-146 402-509 (515)
93 TIGR03244 arg_catab_AstA argin 95.7 0.08 1.7E-06 47.0 9.2 104 1-105 2-141 (336)
94 TIGR03245 arg_AOST_alph argini 95.7 0.07 1.5E-06 47.3 8.7 105 1-106 2-143 (336)
95 PF04958 AstA: Arginine N-succ 95.6 0.056 1.2E-06 48.1 7.8 109 1-110 4-150 (342)
96 KOG2036|consensus 95.5 0.057 1.2E-06 51.9 7.8 90 81-175 614-752 (1011)
97 TIGR03243 arg_catab_AOST argin 95.3 0.13 2.8E-06 45.6 8.9 105 1-106 2-142 (335)
98 PRK10456 arginine succinyltran 95.3 0.1 2.2E-06 46.4 8.2 104 1-105 4-143 (344)
99 PRK14852 hypothetical protein; 95.1 0.08 1.7E-06 53.2 8.0 155 4-167 35-199 (989)
100 PF02474 NodA: Nodulation prot 94.9 0.065 1.4E-06 42.8 5.3 152 3-174 14-183 (196)
101 cd04265 DUF619-NAGS-U DUF619 d 94.9 0.14 3.1E-06 37.3 6.8 46 79-132 32-77 (99)
102 KOG2779|consensus 94.5 0.21 4.6E-06 44.3 8.1 117 7-138 92-224 (421)
103 KOG2535|consensus 93.9 0.069 1.5E-06 47.3 3.9 50 92-146 498-547 (554)
104 PF04377 ATE_C: Arginine-tRNA- 93.7 1.5 3.2E-05 33.6 10.4 79 26-127 25-105 (128)
105 PF13444 Acetyltransf_5: Acety 93.3 0.31 6.7E-06 35.5 5.9 68 36-103 28-100 (101)
106 PRK00756 acyltransferase NodA; 92.7 0.67 1.5E-05 36.9 7.3 148 3-170 14-179 (196)
107 PHA00432 internal virion prote 92.6 2 4.4E-05 33.2 9.7 83 37-146 36-121 (137)
108 KOG4601|consensus 92.4 0.79 1.7E-05 38.4 7.6 105 24-142 53-164 (264)
109 PHA01733 hypothetical protein 92.0 0.48 1E-05 37.2 5.7 89 37-148 46-134 (153)
110 PF09924 DUF2156: Uncharacteri 91.9 1.1 2.4E-05 39.0 8.7 101 5-127 142-248 (299)
111 KOG3014|consensus 91.8 0.67 1.4E-05 39.3 6.7 70 42-111 135-213 (257)
112 PF04768 DUF619: Protein of un 91.5 1.9 4.1E-05 34.7 8.9 109 8-143 33-143 (170)
113 PRK01305 arginyl-tRNA-protein 91.5 4.7 0.0001 34.3 11.7 81 26-129 130-212 (240)
114 COG3138 AstA Arginine/ornithin 90.4 1.1 2.5E-05 38.7 6.8 103 1-104 4-142 (336)
115 PF01853 MOZ_SAS: MOZ/SAS fami 88.7 4.1 8.9E-05 33.2 8.6 29 83-111 82-110 (188)
116 KOG3698|consensus 87.1 1.1 2.5E-05 42.3 5.0 57 88-147 823-879 (891)
117 COG5092 NMT1 N-myristoyl trans 86.8 1.4 3.1E-05 38.6 5.3 98 7-119 90-200 (451)
118 COG2401 ABC-type ATPase fused 86.0 0.25 5.4E-06 45.3 0.2 61 80-143 240-305 (593)
119 COG5630 ARG2 Acetylglutamate s 85.2 3.6 7.8E-05 37.1 7.0 86 7-111 345-431 (495)
120 PF11039 DUF2824: Protein of u 84.7 16 0.00035 28.1 11.4 103 36-165 36-138 (151)
121 PF02799 NMT_C: Myristoyl-CoA: 84.4 17 0.00036 29.8 10.0 126 2-146 32-165 (190)
122 PLN03238 probable histone acet 82.3 5.2 0.00011 34.8 6.6 28 84-111 158-185 (290)
123 PF04339 DUF482: Protein of un 81.3 12 0.00027 33.9 9.0 119 3-151 209-334 (370)
124 PF11124 Pho86: Inorganic phos 78.6 23 0.00049 31.1 9.4 92 41-145 172-270 (304)
125 PF04339 DUF482: Protein of un 78.5 52 0.0011 29.9 12.3 141 1-152 2-166 (370)
126 cd04266 DUF619-NAGS-FABP DUF61 77.1 12 0.00027 27.6 6.4 48 78-132 36-84 (108)
127 KOG1472|consensus 76.7 1 2.2E-05 44.0 0.7 122 24-169 405-530 (720)
128 PF02388 FemAB: FemAB family; 76.2 57 0.0012 29.9 12.0 197 5-228 2-224 (406)
129 PLN03239 histone acetyltransfe 74.9 9.7 0.00021 34.1 6.2 28 84-111 216-243 (351)
130 cd03173 DUF619-like DUF619 dom 74.1 29 0.00062 25.2 7.6 45 79-131 31-75 (98)
131 PTZ00064 histone acetyltransfe 73.6 8.8 0.00019 36.0 5.8 28 84-111 387-414 (552)
132 PRK04531 acetylglutamate kinas 72.1 15 0.00033 33.7 7.1 98 8-139 263-360 (398)
133 PLN00104 MYST -like histone ac 69.0 8.2 0.00018 35.8 4.6 28 84-111 309-336 (450)
134 PF12261 T_hemolysin: Thermost 66.5 34 0.00074 27.7 7.3 93 44-146 41-142 (179)
135 KOG2696|consensus 61.9 17 0.00036 32.8 5.0 45 81-129 217-261 (403)
136 PRK02983 lysS lysyl-tRNA synth 61.1 39 0.00085 35.3 8.2 100 4-127 381-487 (1094)
137 COG2898 Uncharacterized conser 58.6 50 0.0011 31.6 7.8 101 4-127 354-460 (538)
138 cd09012 Glo_EDI_BRP_like_24 Th 55.1 20 0.00043 26.2 3.9 17 129-145 11-27 (124)
139 PF12953 DUF3842: Domain of un 51.1 34 0.00074 26.2 4.4 44 93-143 7-50 (131)
140 COG2935 Putative arginyl-tRNA: 46.8 79 0.0017 27.0 6.4 61 46-129 159-219 (253)
141 KOG2747|consensus 45.9 33 0.00071 31.3 4.3 28 84-111 263-290 (396)
142 cd08356 Glo_EDI_BRP_like_17 Th 45.6 21 0.00046 25.8 2.7 20 130-149 13-32 (113)
143 cd07235 MRD Mitomycin C resist 45.6 22 0.00047 25.7 2.8 26 120-146 3-28 (122)
144 PHA02769 hypothetical protein; 45.5 25 0.00054 26.3 2.9 47 99-147 94-140 (154)
145 cd08350 BLMT_like BLMT, a bleo 42.2 38 0.00083 24.5 3.6 19 130-148 14-32 (120)
146 cd08353 Glo_EDI_BRP_like_7 Thi 42.0 32 0.00069 25.7 3.3 29 117-146 3-31 (142)
147 cd08358 Glo_EDI_BRP_like_21 Th 40.1 60 0.0013 24.6 4.4 18 129-146 13-31 (127)
148 KOG2779|consensus 37.2 3.2E+02 0.0069 24.9 8.9 132 1-151 263-402 (421)
149 COG5653 Protein involved in ce 37.1 3.3E+02 0.007 25.1 9.2 83 20-125 250-336 (406)
150 COG3473 Maleate cis-trans isom 36.2 64 0.0014 27.0 4.2 33 115-147 115-150 (238)
151 PF11090 DUF2833: Protein of u 35.5 1.1E+02 0.0024 21.6 4.8 27 118-144 56-82 (86)
152 KOG4387|consensus 34.2 2.4E+02 0.0052 22.9 7.0 79 87-170 105-186 (191)
153 cd08342 HPPD_N_like N-terminal 32.9 68 0.0015 23.9 3.8 29 119-148 2-31 (136)
154 PF00925 GTP_cyclohydro2: GTP 32.9 73 0.0016 25.3 4.1 32 115-148 137-168 (169)
155 PF02100 ODC_AZ: Ornithine dec 31.3 1.6E+02 0.0035 21.6 5.4 62 79-146 23-87 (108)
156 cd07267 THT_Oxygenase_N N-term 30.7 80 0.0017 22.5 3.7 27 119-146 5-31 (113)
157 TIGR02990 ectoine_eutA ectoine 28.9 75 0.0016 26.9 3.7 44 101-147 106-152 (239)
158 PF13530 SCP2_2: Sterol carrie 27.9 1.8E+02 0.0038 23.9 5.8 74 26-124 10-87 (218)
159 COG5027 SAS2 Histone acetyltra 27.6 46 0.00099 29.9 2.2 27 85-111 266-292 (395)
160 TIGR00068 glyox_I lactoylgluta 27.0 73 0.0016 24.2 3.1 31 115-146 15-46 (150)
161 PTZ00129 40S ribosomal protein 26.9 2.7E+02 0.0058 21.9 6.1 46 99-147 74-130 (149)
162 COG0623 FabI Enoyl-[acyl-carri 25.3 88 0.0019 26.7 3.4 45 81-127 143-187 (259)
163 COG2348 Peptidoglycan interpep 24.7 4.2E+02 0.0091 24.6 7.9 57 92-151 78-149 (418)
164 cd04263 DUF619-NAGK-FABP DUF61 24.7 2.8E+02 0.006 20.1 7.2 44 79-130 31-74 (98)
165 cd08344 MhqB_like_N N-terminal 24.0 1E+02 0.0022 21.8 3.2 28 118-146 3-30 (112)
166 cd08346 PcpA_N_like N-terminal 23.7 1E+02 0.0022 21.8 3.2 29 118-147 2-31 (126)
167 PF12681 Glyoxalase_2: Glyoxal 23.2 1.1E+02 0.0023 21.2 3.2 23 130-152 7-30 (108)
168 COG5151 SSL1 RNA polymerase II 22.1 43 0.00094 29.6 1.0 65 162-233 316-389 (421)
169 cd08362 BphC5-RrK37_N_like N-t 21.9 1.4E+02 0.0031 21.1 3.7 33 117-150 3-36 (120)
170 PF14268 YoaP: YoaP-like 21.5 83 0.0018 19.3 1.9 13 233-245 20-32 (44)
171 cd07238 Glo_EDI_BRP_like_5 Thi 20.7 1E+02 0.0022 21.7 2.7 16 130-145 12-28 (112)
172 PF13380 CoA_binding_2: CoA bi 20.7 1.4E+02 0.003 22.0 3.4 43 101-146 66-108 (116)
173 cd07254 Glo_EDI_BRP_like_20 Th 20.6 1.7E+02 0.0036 20.8 3.9 29 120-148 2-32 (120)
174 cd07253 Glo_EDI_BRP_like_2 Thi 20.6 1.3E+02 0.0028 21.1 3.3 31 117-148 3-34 (125)
175 PF06514 PsbU: Photosystem II 20.5 50 0.0011 23.7 0.9 23 213-236 26-48 (93)
176 TIGR03645 glyox_marine lactoyl 20.4 1.2E+02 0.0025 23.6 3.1 29 116-145 3-32 (162)
No 1
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.83 E-value=5.7e-19 Score=139.99 Aligned_cols=147 Identities=18% Similarity=0.281 Sum_probs=114.8
Q ss_pred CCCCChhhHHHHHHhhcCC--CC------CCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhh
Q psy16746 1 MNSRSPDYQANVLTSTSLR--HS------GNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILA 72 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~--fp------~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~ 72 (247)
||+++++|.+.+.++.... +. ...++.|.......+....+++..+|++||++.+.....+
T Consensus 6 lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~----------- 74 (162)
T PRK10140 6 IRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRP----------- 74 (162)
T ss_pred EEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEeccccc-----------
Confidence 4778999999999998642 11 1122344443333344567888889999999998753210
Q ss_pred cccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceec
Q psy16746 73 SSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYS 152 (247)
Q Consensus 73 ~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~ 152 (247)
.....+.+ +++|+|++||+|+|+.|++.++++++ +..|++.+.+.|.+.|.+|++||+|+||+..|..+.++.
T Consensus 75 ----~~~~~~~~-~~~v~p~~rg~Gig~~ll~~l~~~~~--~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~ 147 (162)
T PRK10140 75 ----RRSHVADF-GICVDSRWKNRGVASALMREMIEMCD--NWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYAL 147 (162)
T ss_pred ----ccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHH--hhCCccEEEEEEEcCCHHHHHHHHHCCCEEEeeccccee
Confidence 11223444 49999999999999999999999998 237999999999999999999999999999999998888
Q ss_pred cCCcccceEEEEE
Q psy16746 153 IKGRSRDGFTYVL 165 (247)
Q Consensus 153 ~~g~~~d~~~m~~ 165 (247)
.+|.+.|...|.+
T Consensus 148 ~~~~~~d~~~~~~ 160 (162)
T PRK10140 148 RNGEYVDAYYMAR 160 (162)
T ss_pred eCCeEEEEEEEEe
Confidence 8899999999876
No 2
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.81 E-value=1.5e-18 Score=136.00 Aligned_cols=142 Identities=21% Similarity=0.383 Sum_probs=114.4
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCc
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIE 80 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (247)
||.++++|++.+..+....+..++....+.... ......+++..++++||++.+.... .
T Consensus 4 iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~~~--------------------~ 62 (146)
T PRK09491 4 ISSLTPADLPAAYHIEQRAHAFPWSEKTFASNQ-GERYLNLKLTVNGQMAAFAITQVVL--------------------D 62 (146)
T ss_pred hhcCChhhhHHHHHHHHhcCCCCCCHHHHHHHH-hcCceEEEEEECCeEEEEEEEEeec--------------------C
Confidence 688999999999999876665555443333222 2344455677889999999876421 2
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceecc-CCcccc
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSI-KGRSRD 159 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~-~g~~~d 159 (247)
...+..++|+|++||+|+|+.+++.+++.+. +.|++.+.+.+.+.|.+|.+||+|+||+..+..+.++.. +| +.|
T Consensus 63 ~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~---~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~~~~~~-~~d 138 (146)
T PRK09491 63 EATLFNIAVDPDYQRQGLGRALLEHLIDELE---KRGVATLWLEVRASNAAAIALYESLGFNEVTIRRNYYPTADG-RED 138 (146)
T ss_pred ceEEEEEEECHHHccCCHHHHHHHHHHHHHH---HCCCcEEEEEEccCCHHHHHHHHHcCCEEeeeeeccccCCCC-cee
Confidence 3557789999999999999999999999998 889999999999999999999999999999998888754 55 999
Q ss_pred eEEEEEEe
Q psy16746 160 GFTYVLYI 167 (247)
Q Consensus 160 ~~~m~~~l 167 (247)
.+.|.+.+
T Consensus 139 ~~~~~~~~ 146 (146)
T PRK09491 139 AIIMALPL 146 (146)
T ss_pred EEEEeccC
Confidence 99998753
No 3
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.79 E-value=1.7e-18 Score=149.38 Aligned_cols=145 Identities=12% Similarity=0.104 Sum_probs=121.7
Q ss_pred CCCCChhhHHHHHHhhcCCCCC---C-CchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG---N-YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~---~-~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
||.++++|.+++.++....|+. + ....++..... +...++++..+|++||++.+...
T Consensus 118 IR~a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~-~~~~~~v~~~~g~iVG~~~~~~~------------------ 178 (266)
T TIGR03827 118 LRIATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMK-SNVVYFGVEDGGKIIALASAEMD------------------ 178 (266)
T ss_pred EEECCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhc-CCcEEEEEEECCEEEEEEEEecC------------------
Confidence 4678999999999999877642 1 12344554443 45567888899999999987532
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCc
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGR 156 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~ 156 (247)
.....++|..++|+|+|||+|+|++|++.++++++ +.|++.+.+.+...|.+|.++|+|+||+.+|+++....++|.
T Consensus 179 ~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~---~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l~n~~~i~G~ 255 (266)
T TIGR03827 179 PENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMK---EKGIRTAYTIARASSYGMNITFARLGYAYGGTLVNNTNISGG 255 (266)
T ss_pred CCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HCCCcEEEeehhhcchhHHHHHHHcCCccccEEeecceecCC
Confidence 13356889999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEe
Q psy16746 157 SRDGFTYVLYI 167 (247)
Q Consensus 157 ~~d~~~m~~~l 167 (247)
+.|..++.+.|
T Consensus 256 ~~d~~i~~k~l 266 (266)
T TIGR03827 256 FESMNIWYKQL 266 (266)
T ss_pred cccceeeeecC
Confidence 99999888754
No 4
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.79 E-value=3.3e-18 Score=130.39 Aligned_cols=130 Identities=24% Similarity=0.341 Sum_probs=107.9
Q ss_pred hHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEE
Q psy16746 8 YQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87 (247)
Q Consensus 8 d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l 87 (247)
|.+++.++....|+.++....+...........+++..++++||++.+... ....++..+
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--------------------~~~~~i~~~ 60 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIV--------------------LDEAHILNI 60 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEec--------------------CCCeEEEEE
Confidence 577888999999998777766666665555566777778999999997642 234568889
Q ss_pred EeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCcccceEE
Q psy16746 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFT 162 (247)
Q Consensus 88 ~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d~~~ 162 (247)
+|+|++||+|+|++|++++++.++ +.|++.+.+.+.+.|.+|++||+|+||+.++..+.|+..++ .|.+.
T Consensus 61 ~v~~~~rg~G~g~~ll~~~~~~~~---~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~~~~~~~~~--~~~~~ 130 (131)
T TIGR01575 61 AVKPEYQGQGIGRALLRELIDEAK---GRGVNEIFLEVRVSNIAAQALYKKLGFNEIAIRRNYYPDPG--EDAIV 130 (131)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHH---HcCCCeEEEEEecccHHHHHHHHHcCCCccccccccccCCC--ccccc
Confidence 999999999999999999999998 88899999999999999999999999999999998876433 55544
No 5
>KOG3139|consensus
Probab=99.77 E-value=1.7e-17 Score=129.00 Aligned_cols=141 Identities=23% Similarity=0.400 Sum_probs=116.9
Q ss_pred ChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCE-EEEEEEEEeeeccccCccchhhhhcccCCCCcEEE
Q psy16746 5 SPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGV-IIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83 (247)
Q Consensus 5 ~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~-iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (247)
....++.+..+....++.+|+.-...........+++++.+++. .||.+.+.... ......++
T Consensus 23 ~~~~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~----------------~r~~~rgy 86 (165)
T KOG3139|consen 23 AEEYLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDT----------------HRNTLRGY 86 (165)
T ss_pred HHHHHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccc----------------cCCcceEE
Confidence 34555668888888888888776666665555667788887665 69999988532 11246899
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCcccceEEE
Q psy16746 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTY 163 (247)
Q Consensus 84 I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d~~~m 163 (247)
|..++|+++|||+|||++|++.+++.+. ..|+..|.|++...|.+|.++|+++||+..++...||. +| .|++.|
T Consensus 87 i~mLaV~~e~Rg~GIg~aLvr~aId~m~---~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~~YYl-ng--~dA~rl 160 (165)
T KOG3139|consen 87 IAMLAVDSEYRGQGIGKALVRKAIDAMR---SRGYSEVVLETEVTNLSALRLYESLGFKRDKRLFRYYL-NG--MDALRL 160 (165)
T ss_pred EEEEEechhhccccHHHHHHHHHHHHHH---HCCCcEEEEeccccchHHHHHHHhcCceEecceeEEEE-CC--cceEEE
Confidence 9999999999999999999999999999 99999999999999999999999999999999888886 44 489988
Q ss_pred EEEe
Q psy16746 164 VLYI 167 (247)
Q Consensus 164 ~~~l 167 (247)
.+.+
T Consensus 161 ~L~~ 164 (165)
T KOG3139|consen 161 KLFF 164 (165)
T ss_pred Eeec
Confidence 8765
No 6
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.77 E-value=1.5e-17 Score=131.27 Aligned_cols=142 Identities=24% Similarity=0.283 Sum_probs=107.2
Q ss_pred CCCCChhhHHHHHHhhcC-----CCCCC---Cch----hHHHHhhcCCCeEEEEEEE-CCEEEEEEEEEeeeccccCccc
Q psy16746 1 MNSRSPDYQANVLTSTSL-----RHSGN---YPL----SWYKDITSEPSFYSLAALY-NGVIIGLIVAEILQYTSLNKED 67 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~-----~fp~~---~~~----~~~~~~~~~~~~~~~va~~-~~~iVG~~~~~~~~~~~~~~~~ 67 (247)
||+++++|.+++..+... .+... ... .+++.....+....+++.. +|++||++.+....
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~-------- 72 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDID-------- 72 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESS--------
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeee--------
Confidence 578999999999999853 23222 222 3444432223445555555 99999999988532
Q ss_pred hhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 68 KDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 68 ~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
.....+.+. +.|.|++|++|+|+.|+..+++.|+ .+.|+++|.+.|.+.|.+|++||+++||+.+|..
T Consensus 73 ---------~~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af--~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~~g~~ 140 (155)
T PF13420_consen 73 ---------PYNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAF--KELGIHKIYLEVFSSNEKAINFYKKLGFEEEGEL 140 (155)
T ss_dssp ---------SGTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH---HHTT-CEEEEEEETT-HHHHHHHHHTTEEEEEEE
T ss_pred ---------ccCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhh--hccCeEEEEEEEecCCHHHHHHHHhCCCEEEEEE
Confidence 233455555 8888999999999999999999994 3999999999999999999999999999999999
Q ss_pred cceeccCCcccceEE
Q psy16746 148 PYYYSIKGRSRDGFT 162 (247)
Q Consensus 148 ~~~~~~~g~~~d~~~ 162 (247)
+.++..+|.|.|..+
T Consensus 141 ~~~~~~~~~y~D~~~ 155 (155)
T PF13420_consen 141 KDHIFINGKYYDVVW 155 (155)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred ecEEEECCeEEEeEC
Confidence 999999999999753
No 7
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.77 E-value=5.4e-18 Score=132.02 Aligned_cols=128 Identities=15% Similarity=0.133 Sum_probs=100.4
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCch----hHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPL----SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~----~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
|++++++|++.+..+.....+..++. ..+...+..+...+++++.++++||++.+...... .
T Consensus 6 ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~--------------~ 71 (144)
T PRK10146 6 LRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHL--------------H 71 (144)
T ss_pred EeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccc--------------c
Confidence 57899999999999877655443332 12233334455667889999999999998743100 1
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEee
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g 145 (247)
.....++|..++|+|++||+|+|+.|++.+++.|+ +.|++.+.|++...|.+|++||+++||+..+
T Consensus 72 ~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~---~~~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~ 137 (144)
T PRK10146 72 HVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEAR---QAGAEMTELSTNVKRHDAHRFYLREGYEQSH 137 (144)
T ss_pred ccchhheeheeEECHHHcCCCHHHHHHHHHHHHHH---HcCCcEEEEecCCCchHHHHHHHHcCCchhh
Confidence 12234678899999999999999999999999998 8999999999999999999999999998664
No 8
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.76 E-value=4e-17 Score=133.96 Aligned_cols=148 Identities=15% Similarity=0.177 Sum_probs=111.6
Q ss_pred CCCCChhhHHHHHHhhcCC--C-----CCC-----Cch------hHHHHhhcCCCeEEEEEEE--CCEEEEEEEEEeeec
Q psy16746 1 MNSRSPDYQANVLTSTSLR--H-----SGN-----YPL------SWYKDITSEPSFYSLAALY--NGVIIGLIVAEILQY 60 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~--f-----p~~-----~~~------~~~~~~~~~~~~~~~va~~--~~~iVG~~~~~~~~~ 60 (247)
||..+++|.+.+..+.... + +.. .+. .++......+....+++.. ++++||.+.+....
T Consensus 20 LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~~~~- 98 (194)
T PRK10809 20 VRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFSNVV- 98 (194)
T ss_pred EEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEEeec-
Confidence 4678899999999886541 1 110 011 1122222334444455543 67999999987532
Q ss_pred cccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCC
Q psy16746 61 TSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRR 140 (247)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~G 140 (247)
......++++ ++|+|++||+|+|+.+++.++++++ +..|+++|.+.|.+.|.+|+++|+|+|
T Consensus 99 ---------------~~~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~--~~l~l~~i~~~v~~~N~~S~~l~ek~G 160 (194)
T PRK10809 99 ---------------RGSFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQ--RQQHMHRIMANYMPHNKRSGDLLARLG 160 (194)
T ss_pred ---------------CCCeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHH--hcCCceEEEEEeeCCCHHHHHHHHHCC
Confidence 0122345555 9999999999999999999999998 457999999999999999999999999
Q ss_pred CEEeeeecceeccCCcccceEEEEEEe
Q psy16746 141 FRLHSFLPYYYSIKGRSRDGFTYVLYI 167 (247)
Q Consensus 141 F~~~g~~~~~~~~~g~~~d~~~m~~~l 167 (247)
|+.++..+.++..+|.+.|.+.|.+..
T Consensus 161 f~~~g~~~~~~~~~g~~~d~~~~~~~~ 187 (194)
T PRK10809 161 FEKEGYAKDYLLIDGQWRDHVLTALTT 187 (194)
T ss_pred CcEEeeeccccccCCeEEEEEEeeeeh
Confidence 999999998888899999999998854
No 9
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.76 E-value=6.5e-17 Score=131.79 Aligned_cols=148 Identities=16% Similarity=0.172 Sum_probs=116.8
Q ss_pred CCCCChhhHHHHHHhhcCCC------CCCCch-----hHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchh
Q psy16746 1 MNSRSPDYQANVLTSTSLRH------SGNYPL-----SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKD 69 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~f------p~~~~~-----~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~ 69 (247)
||.++++|++.+..+..... +.++.. .++......+....+++..+|++||++.+...+
T Consensus 9 lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~---------- 78 (186)
T PRK15130 9 LRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEIN---------- 78 (186)
T ss_pred EecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeec----------
Confidence 57889999999999865432 111111 123334334455678888899999999876532
Q ss_pred hhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecc
Q psy16746 70 ILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPY 149 (247)
Q Consensus 70 ~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~ 149 (247)
.....+.+. ++|+|+|||+|+|+.+++.++++++ +..|+++|.+.|...|.+|++||+|+||+.++..+.
T Consensus 79 -------~~~~~~~~~-~~v~~~~~g~G~g~~l~~~l~~~~~--~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~~~~ 148 (186)
T PRK15130 79 -------HVHRRAEFQ-IIISPEYQGKGLATRAAKLAMDYGF--TVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGELIH 148 (186)
T ss_pred -------CCCCeEEEE-EEECHHHcCCCHHHHHHHHHHHHHh--hcCCceEEEEEEccCCHHHHHHHHHCCCEEEEEEeh
Confidence 122344454 9999999999999999999999998 568999999999999999999999999999999998
Q ss_pred eeccCCcccceEEEEEEec
Q psy16746 150 YYSIKGRSRDGFTYVLYIN 168 (247)
Q Consensus 150 ~~~~~g~~~d~~~m~~~l~ 168 (247)
++..+|.+.|.+.|.+...
T Consensus 149 ~~~~~g~~~d~~~~~~~~~ 167 (186)
T PRK15130 149 EFFINGEYRNTIRMCIFQH 167 (186)
T ss_pred eEEECCEEEEEEEEEeeHH
Confidence 8888999999999988653
No 10
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.75 E-value=1.5e-16 Score=128.92 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=114.5
Q ss_pred CCCCChhhHHHHHHhhc--CC-------CCCC-Cc----hhHHHHhhc---CCCeEEEEEEECCEEEEEEEEEeeecccc
Q psy16746 1 MNSRSPDYQANVLTSTS--LR-------HSGN-YP----LSWYKDITS---EPSFYSLAALYNGVIIGLIVAEILQYTSL 63 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~--~~-------fp~~-~~----~~~~~~~~~---~~~~~~~va~~~~~iVG~~~~~~~~~~~~ 63 (247)
||+.+++|.+.+..+.. .. ++.+ .+ ..+++.... ......+++..+|++||++.+....
T Consensus 13 Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~~---- 88 (179)
T PRK10151 13 LHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRIE---- 88 (179)
T ss_pred EEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEeec----
Confidence 46788999998888862 21 1211 22 234443221 1223457777899999999887532
Q ss_pred CccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEE
Q psy16746 64 NKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143 (247)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~ 143 (247)
.....+.|+ ++++|+|||+|+|+.++..++++++ +..|++++.+.+.+.|.+|+++++|+||+.
T Consensus 89 -------------~~~~~~~ig-~~i~~~~~g~G~~tea~~~l~~~~~--~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~ 152 (179)
T PRK10151 89 -------------PLNKTAYIG-YWLDESHQGQGIISQALQALIHHYA--QSGELRRFVIKCRVDNPASNQVALRNGFTL 152 (179)
T ss_pred -------------cCCCceEEE-EEEChhhcCCcHHHHHHHHHHHHHH--hhCCccEEEEEEcCCCHHHHHHHHHCCCEE
Confidence 122456666 7899999999999999999999998 457899999999999999999999999999
Q ss_pred eeeecceeccCCcccceEEEEEEec
Q psy16746 144 HSFLPYYYSIKGRSRDGFTYVLYIN 168 (247)
Q Consensus 144 ~g~~~~~~~~~g~~~d~~~m~~~l~ 168 (247)
+|..+.....+|.|.|...|.+.+.
T Consensus 153 ~g~~~~~~~~~g~~~D~~~~~~~~~ 177 (179)
T PRK10151 153 EGCLKQAEYLNGAYDDVNLYARIID 177 (179)
T ss_pred EeEeccceEECCEEEEEEEEEEeec
Confidence 9999988888999999999998764
No 11
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.74 E-value=1e-16 Score=126.44 Aligned_cols=142 Identities=16% Similarity=0.136 Sum_probs=113.6
Q ss_pred CCCCChhhHHHHHHhhcCC------CCCC-Cc----hhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchh
Q psy16746 1 MNSRSPDYQANVLTSTSLR------HSGN-YP----LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKD 69 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~------fp~~-~~----~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~ 69 (247)
||+.+++|.+.+.++.... ++.+ .+ ..|++.....+....+++..+|++||++.+....
T Consensus 3 lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~---------- 72 (156)
T TIGR03585 3 FTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDIN---------- 72 (156)
T ss_pred cccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecC----------
Confidence 6889999999999886432 1112 22 2455555555555678888899999999987532
Q ss_pred hhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecc
Q psy16746 70 ILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPY 149 (247)
Q Consensus 70 ~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~ 149 (247)
.....+.+. ++++|.+| +|+|++++..++++++ +..+++.+.+.|.+.|.+|++||+|+||+.++..+.
T Consensus 73 -------~~~~~~~~g-~~~~~~~~-~G~g~~~~~~~~~~a~--~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~~g~~~~ 141 (156)
T TIGR03585 73 -------LVHKSAFWG-IYANPFCK-PGVGSVLEEAALEYAF--EHLGLHKLSLEVLEFNNKALKLYEKFGFEREGVFRQ 141 (156)
T ss_pred -------hhhCeEEEE-EEeChhhh-cCchHHHHHHHHHHHH--hhCCeeEEEEEEeccCHHHHHHHHHcCCeEeeeehh
Confidence 112345555 55999999 9999999999999998 457999999999999999999999999999999999
Q ss_pred eeccCCcccceEEE
Q psy16746 150 YYSIKGRSRDGFTY 163 (247)
Q Consensus 150 ~~~~~g~~~d~~~m 163 (247)
+...+|.+.|.+.|
T Consensus 142 ~~~~~g~~~d~~~~ 155 (156)
T TIGR03585 142 GIFKEGEYYDVLLM 155 (156)
T ss_pred heeECCeEEEEEEe
Confidence 98889999998877
No 12
>KOG3138|consensus
Probab=99.73 E-value=9.8e-18 Score=135.26 Aligned_cols=162 Identities=28% Similarity=0.417 Sum_probs=131.0
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeee-ccccCccchhhhhcccCCCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQ-YTSLNKEDKDILASSFDKHI 79 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (247)
++..+|.++.++..|++.+||..|+..|+++.+...+...+++..+..+.| +.+.... ..... . ... .
T Consensus 19 l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~~~~~~~A~~~~~~v~a-~~~k~~~~~~~~~--------r-~~~-~ 87 (187)
T KOG3138|consen 19 LRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSNGDLTQLAYYNEIAVGA-VACKLIKFVQNAK--------R-LFG-N 87 (187)
T ss_pred eccCCcchHHHHHHHhccccCcchHHHHHHHHHhcCCHHHhhhhccccccc-eeeeehhhhhhhh--------h-hhc-c
Confidence 456899999999999999999999999999999887777777766655544 4444322 11000 0 000 1
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCC-ccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCccc
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSS-CKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSR 158 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g-~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~ 158 (247)
++.||..++|.|.||.+|||+.|++.+.+.+. ... ++.++++|...|..|+.||++.||+.+++.+.||.+.+...
T Consensus 88 ~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~---~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~y~~~~~~~ 164 (187)
T KOG3138|consen 88 RVIYILSLGVLPRYRNKGIGSKLLEFVKKYCS---EAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNYYSILGPPD 164 (187)
T ss_pred ceeEEEeecccHHHHhcchHHHHHHHHHHHHh---cccccceEEEEEEeCCCcHHHHHHhcCceEeeccccccccccCcc
Confidence 26999999999999999999999999999998 555 89999999999999999999999999999999999988888
Q ss_pred ceEEEEEEecCCCCCcch
Q psy16746 159 DGFTYVLYINGGHAAWSL 176 (247)
Q Consensus 159 d~~~m~~~l~~~~~~~~~ 176 (247)
+.+++....+++.+||..
T Consensus 165 ~~~l~~~~~~~~~~~~~~ 182 (187)
T KOG3138|consen 165 DSFLRKLLIHGSGSPPTR 182 (187)
T ss_pred hhhhhhheecCCCCCCcc
Confidence 888888888776666553
No 13
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.73 E-value=8.6e-17 Score=129.38 Aligned_cols=137 Identities=20% Similarity=0.304 Sum_probs=112.5
Q ss_pred CCCCChhhHH--HHHHhhcCCCC--CCCchhHHHHhhcCCCeEEEEEEEC---C----EEEEEEEEEeeeccccCccchh
Q psy16746 1 MNSRSPDYQA--NVLTSTSLRHS--GNYPLSWYKDITSEPSFYSLAALYN---G----VIIGLIVAEILQYTSLNKEDKD 69 (247)
Q Consensus 1 ~~~~~~~d~~--~i~~l~~~~fp--~~~~~~~~~~~~~~~~~~~~va~~~---~----~iVG~~~~~~~~~~~~~~~~~~ 69 (247)
++.....|+. .+..+....|. .+++...+...+.......+++..+ + +++|++........
T Consensus 14 ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~-------- 85 (177)
T COG0456 14 IREAINKDLLDVALAALEARTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGR-------- 85 (177)
T ss_pred hhhhhhcccchHHHHHHhhhcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCC--------
Confidence 3556778888 88888888888 4688888888887777777788763 3 59999998632100
Q ss_pred hhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCc-cEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 70 ILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSC-KAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 70 ~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~-~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
......++|..++|+|+|||+|||++|++++++.+. +.+. ..+.|.|+.+|.+|++||+|+||+..++.+
T Consensus 86 ------~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~---~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~~ 156 (177)
T COG0456 86 ------PSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLR---ERGLADKIVLEVRESNEAAIGLYRKLGFEVVKIRK 156 (177)
T ss_pred ------ccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHH---hcCCCceEEEEEecCChHHHHHHHHcCCEEEeeeh
Confidence 000347899999999999999999999999999998 8886 899999999999999999999999999999
Q ss_pred ceeccC
Q psy16746 149 YYYSIK 154 (247)
Q Consensus 149 ~~~~~~ 154 (247)
.||...
T Consensus 157 ~yy~~~ 162 (177)
T COG0456 157 NYYADG 162 (177)
T ss_pred hhccCC
Confidence 998744
No 14
>PRK03624 putative acetyltransferase; Provisional
Probab=99.72 E-value=7.1e-17 Score=124.22 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=97.7
Q ss_pred CCCCChhhHHHHHHhhcCCCCC-CC--chhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG-NY--PLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDK 77 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~-~~--~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (247)
||.++++|++++.++....... .+ +...+......+...++++..++++||++.+...
T Consensus 5 ir~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~------------------- 65 (140)
T PRK03624 5 IRVFRQADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGYD------------------- 65 (140)
T ss_pred EEEcccccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeecc-------------------
Confidence 4678899999999988765211 12 1222333334455677888889999999976531
Q ss_pred CCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 78 ~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
....++..++|+|+|||+|+|+.|++.+++.++ +.|++.+.+.+.+.|.+|++||+|+||+..+..
T Consensus 66 -~~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~---~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~~~ 131 (140)
T PRK03624 66 -GHRGWAYYLAVHPDFRGRGIGRALVARLEKKLI---ARGCPKINLQVREDNDAVLGFYEALGYEEQDRI 131 (140)
T ss_pred -CCCceEEEEEECHHHhCCCHHHHHHHHHHHHHH---HCCCCEEEEEEecCcHHHHHHHHHcCCccccEE
Confidence 133567789999999999999999999999998 889999999999999999999999999987653
No 15
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=2.4e-16 Score=125.62 Aligned_cols=152 Identities=16% Similarity=0.116 Sum_probs=122.0
Q ss_pred CCCCChhhHHHHHHhhcCCCCCC---------CchhHHHHhhcC--CCeEEEEEEEC-CEEEEEEEEEeeeccccCccch
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGN---------YPLSWYKDITSE--PSFYSLAALYN-GVIIGLIVAEILQYTSLNKEDK 68 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~---------~~~~~~~~~~~~--~~~~~~va~~~-~~iVG~~~~~~~~~~~~~~~~~ 68 (247)
||.++.+|++.|..++....... ..+.+.+.+... .....+|++.+ |+++|++.+..-.
T Consensus 4 ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr--------- 74 (169)
T COG1247 4 IRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFR--------- 74 (169)
T ss_pred EecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeecc---------
Confidence 57889999999999998876532 112222222222 23577888766 8999999987532
Q ss_pred hhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 69 DILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 69 ~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
....-+.....++.|+|+.||+|+|++|++.+++.+. ..|++.+...+...|.+|+++++++||+..|..+
T Consensus 75 ------~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~---~~g~~~lva~I~~~n~aSi~lh~~~GF~~~G~~~ 145 (169)
T COG1247 75 ------ERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEAR---ALGVRELVAGIESDNLASIALHEKLGFEEVGTFP 145 (169)
T ss_pred ------CccccceEEEEEEEECcccccccHHHHHHHHHHHHHH---hCCeEEEEEEEcCCCcHhHHHHHHCCCEEecccc
Confidence 0123345556789999999999999999999999998 9999999999999999999999999999999999
Q ss_pred ceeccCCcccceEEEEEEecCC
Q psy16746 149 YYYSIKGRSRDGFTYVLYINGG 170 (247)
Q Consensus 149 ~~~~~~g~~~d~~~m~~~l~~~ 170 (247)
..-...|.|.|..+|.+.++.+
T Consensus 146 ~vg~k~g~wld~~~~~~~l~~~ 167 (169)
T COG1247 146 EVGDKFGRWLDLVLMQLLLEEG 167 (169)
T ss_pred ccccccceEEeeeeeehhhccc
Confidence 8877789999999999988654
No 16
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.71 E-value=1.7e-16 Score=126.41 Aligned_cols=126 Identities=13% Similarity=0.178 Sum_probs=98.3
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCch--hHHHHhhcCCCeEEEEEE-ECCEEEEEEEEEeeeccccCccchhhhhcccCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPL--SWYKDITSEPSFYSLAAL-YNGVIIGLIVAEILQYTSLNKEDKDILASSFDK 77 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~--~~~~~~~~~~~~~~~va~-~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (247)
||.++++|++++..|.....+..... .+.. .........+++. .+|++||++.+.... .
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~ivG~~~~~~~~-----------------~ 62 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLL-LCTDFADTSIVAESEGGEIVGFVSGYLRP-----------------D 62 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhh-hhhhcCCcEEEEEcCCCeEEEEEEEEecC-----------------C
Confidence 68899999999999998876533221 1211 2222234456676 467999998765321 2
Q ss_pred CCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 78 ~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
.....++..++|+|++||+|+|++|++.+++.++ ..++..+.+.|.+.|.+|++||+|+||+..+..
T Consensus 63 ~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~---~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~~~~ 129 (157)
T TIGR02406 63 RPDVLFVWQVAVDPRARGKGLARRLLEALLERVA---CERVRHLETTITPDNQASRALFKALARRRGVHL 129 (157)
T ss_pred CCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHH---hCCCCEEEEEEcCCCHHHHHHHHHhCcccCCCe
Confidence 3356889999999999999999999999999998 889999999999999999999999999976553
No 17
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.70 E-value=4.2e-16 Score=127.89 Aligned_cols=126 Identities=13% Similarity=0.091 Sum_probs=97.4
Q ss_pred CCCCChhhHHHHHHhhcCCCCC-----CC--ch-------hHHHHhhcC-CCeEE-EEEEECCEEEEEEEEEeeeccccC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG-----NY--PL-------SWYKDITSE-PSFYS-LAALYNGVIIGLIVAEILQYTSLN 64 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~-----~~--~~-------~~~~~~~~~-~~~~~-~va~~~~~iVG~~~~~~~~~~~~~ 64 (247)
||.++++|.+.+..+....+.. ++ +. .+++..... ..... +++..+|++||++.+...
T Consensus 46 lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~------ 119 (191)
T TIGR02382 46 ARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLREL------ 119 (191)
T ss_pred ceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEec------
Confidence 5788999999999998876531 11 11 122233222 22333 345567899999988742
Q ss_pred ccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEe
Q psy16746 65 KEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLH 144 (247)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 144 (247)
....++|..++|+|++||+|+|++|+++++++++ +.|+++|.+.|.+.|.+|++||+|+||+.+
T Consensus 120 -------------~~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~---~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~ 183 (191)
T TIGR02382 120 -------------NDTDARIGLLAVFPGAQSRGIGAELMQTALNWCY---ARGLTRLRVATQMGNTAALRLYIRSGANIE 183 (191)
T ss_pred -------------CCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HcCCCEEEEEeCCCCHHHHHHHHHcCCccc
Confidence 1234678889999999999999999999999999 899999999999999999999999999988
Q ss_pred eeec
Q psy16746 145 SFLP 148 (247)
Q Consensus 145 g~~~ 148 (247)
+...
T Consensus 184 ~~~~ 187 (191)
T TIGR02382 184 STAY 187 (191)
T ss_pred ccee
Confidence 7643
No 18
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.68 E-value=1.1e-15 Score=107.73 Aligned_cols=83 Identities=33% Similarity=0.412 Sum_probs=75.0
Q ss_pred EEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEE
Q psy16746 43 ALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIF 122 (247)
Q Consensus 43 a~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~ 122 (247)
|+++|++||++.+....... .....++|..++|+|+|||+|+|+.|++++++.++ +.|++.+.
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~--------------~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~---~~g~~~i~ 63 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPF--------------DHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWAR---KRGIKRIY 63 (83)
T ss_dssp EEETTEEEEEEEEEEEETTT--------------TTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHH---HTTESEEE
T ss_pred CcCCCEEEEEEEEEECCCcc--------------ccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHH---hcCccEEE
Confidence 57899999999999764221 12579999999999999999999999999999999 89999999
Q ss_pred EEEEcCCHHHHHHHHhCCCE
Q psy16746 123 LHVLTSNKPAIHFYEKRRFR 142 (247)
Q Consensus 123 l~v~~~N~~a~~fy~k~GF~ 142 (247)
+.+.+.|.++++||+|+||+
T Consensus 64 ~~~~~~n~~~~~~~~k~Gf~ 83 (83)
T PF00583_consen 64 LDVSPDNPAARRFYEKLGFE 83 (83)
T ss_dssp EEEETTGHHHHHHHHHTTEE
T ss_pred EEEeCCCHHHHHHHHHcCCC
Confidence 99999999999999999996
No 19
>PHA00673 acetyltransferase domain containing protein
Probab=99.67 E-value=1.4e-15 Score=119.60 Aligned_cols=126 Identities=10% Similarity=0.037 Sum_probs=102.2
Q ss_pred CCChhhHHHHHHhhcCCC-C---------CCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhh
Q psy16746 3 SRSPDYQANVLTSTSLRH-S---------GNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILA 72 (247)
Q Consensus 3 ~~~~~d~~~i~~l~~~~f-p---------~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~ 72 (247)
.++++|++.|.+|..+.- . .+|. ..++.+..+++...+|++++|++||++.+...+...
T Consensus 11 ~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~-~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~---------- 79 (154)
T PHA00673 11 FAELADAPTFASLCAEYAHESANADLAGRAPDH-HAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPH---------- 79 (154)
T ss_pred hccHhhHHHHHHHHHhcccccccccccccchhH-HHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCc----------
Confidence 368899999999975521 0 0122 236777788999999999999999999998765221
Q ss_pred cccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 73 SSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 73 ~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
......+.|..++|+|++||+|||++|++.++++++ +.|+..++++..| +.+.+.||.++|+++..+
T Consensus 80 ---~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar---~~Gc~~lyis~~p-~~~tv~fy~~~g~~~~~~ 146 (154)
T PHA00673 80 ---FKGQLIGTTESIFVAAAHRPGGAGMALLRATEALAR---DLGATGLYVSGPT-EGRLVQLLPAAGYRETNR 146 (154)
T ss_pred ---cCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHH---HCCCCEEEEecCC-CccchHHHHhCCchhhch
Confidence 235578899999999999999999999999999999 9999999997666 557889999999997653
No 20
>KOG3235|consensus
Probab=99.67 E-value=8.9e-16 Score=118.70 Aligned_cols=149 Identities=27% Similarity=0.368 Sum_probs=123.2
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEE-ECCEEEEEEEEEeeeccccCccchhhhhcccCCCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAAL-YNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHI 79 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~-~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (247)
||.++++|+-.+....-.+.|+.|.-.++-....+-...++||+ .+|+|||++.+..... .....
T Consensus 4 iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~--------------p~~~~ 69 (193)
T KOG3235|consen 4 IRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEED--------------PDDEP 69 (193)
T ss_pred cccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhc--------------ccCCC
Confidence 68899999999999999999988877666555555455678888 5789999999875421 12355
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHH-hCCCEEeeeecceeccCCccc
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYE-KRRFRLHSFLPYYYSIKGRSR 158 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~-k~GF~~~g~~~~~~~~~g~~~ 158 (247)
..++|.+++|..+||+.|||++||..+..... +..+.+.+.|+|+.+|.+|+.+|+ .+||.+.+..+.||... .
T Consensus 70 ~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~--E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~kYYadG---e 144 (193)
T KOG3235|consen 70 PHGHITSLAVKRSYRRLGLAQKLMNQASRAMV--EVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEPKYYADG---E 144 (193)
T ss_pred CCCeeEEeeehhhHHHhhHHHHHHHHHHHHHH--HhhcceEEEEeeecccHHHHHhhhhccceEEeeccccccccc---H
Confidence 68999999999999999999999999888777 567899999999999999999999 79999999999999743 6
Q ss_pred ceEEEEEEec
Q psy16746 159 DGFTYVLYIN 168 (247)
Q Consensus 159 d~~~m~~~l~ 168 (247)
|++.|.+.|.
T Consensus 145 dAyaM~~~L~ 154 (193)
T KOG3235|consen 145 DAYAMRKDLS 154 (193)
T ss_pred HHHHHHHHHH
Confidence 7666766653
No 21
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.67 E-value=1.4e-15 Score=124.96 Aligned_cols=126 Identities=13% Similarity=0.103 Sum_probs=96.6
Q ss_pred CCCCChhhHHHHHHhhcCCCCCC------Cc----hhHHHHhh----cC-CCeEEEEEE-ECCEEEEEEEEEeeeccccC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGN------YP----LSWYKDIT----SE-PSFYSLAAL-YNGVIIGLIVAEILQYTSLN 64 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~------~~----~~~~~~~~----~~-~~~~~~va~-~~~~iVG~~~~~~~~~~~~~ 64 (247)
||.++++|.+.+.++....++.. ++ ..+++.++ .. .....+++. .+|++||++.+...
T Consensus 49 iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~------ 122 (194)
T PRK10975 49 ARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLREL------ 122 (194)
T ss_pred cccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEec------
Confidence 57889999999999977654321 11 12233222 11 122444554 56789999988642
Q ss_pred ccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEe
Q psy16746 65 KEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLH 144 (247)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 144 (247)
....++|..++|+|++||+|+|++|++.++++++ +.|++.+.+.|...|.+|++||+|+||+.+
T Consensus 123 -------------~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~---~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~ 186 (194)
T PRK10975 123 -------------NDTDARIGLLAVFPGAQGRGIGARLMQAALNWCQ---ARGLTRLRVATQMGNLAALRLYIRSGANIE 186 (194)
T ss_pred -------------CCCceEEEEEEEChhhcCCCHHHHHHHHHHHHHH---HcCCCEEEEEeCCCcHHHHHHHHHCCCeEe
Confidence 1234778889999999999999999999999999 899999999999999999999999999998
Q ss_pred eeec
Q psy16746 145 SFLP 148 (247)
Q Consensus 145 g~~~ 148 (247)
+...
T Consensus 187 ~~~~ 190 (194)
T PRK10975 187 STAY 190 (194)
T ss_pred EEEe
Confidence 8754
No 22
>PTZ00330 acetyltransferase; Provisional
Probab=99.65 E-value=2.5e-15 Score=117.32 Aligned_cols=127 Identities=19% Similarity=0.183 Sum_probs=92.9
Q ss_pred CCCCChhhHHHHHHhhcCCCCCC-CchhHHHHhhcC-----CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcc
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGN-YPLSWYKDITSE-----PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASS 74 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~-~~~~~~~~~~~~-----~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~ 74 (247)
||.++++|.+++.++.......+ .+....+.+... .....+++..+|++||++.+...+..
T Consensus 9 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~------------- 75 (147)
T PTZ00330 9 LRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKF------------- 75 (147)
T ss_pred EEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEecccc-------------
Confidence 46789999999999876654322 233222222211 22345666778999999988743210
Q ss_pred cCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 75 ~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.......++|..++|+|+|||+|+|++|++.+++.++ +.|+..+.+.+ |.+|++||+|+||+....
T Consensus 76 ~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~---~~~~~~l~l~~---n~~a~~~y~k~GF~~~~~ 141 (147)
T PTZ00330 76 TRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIAR---SSGCYKVILDC---TEDMVAFYKKLGFRACER 141 (147)
T ss_pred ccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HCCCCEEEEec---ChHHHHHHHHCCCEEece
Confidence 0112236789999999999999999999999999998 88998886654 899999999999997754
No 23
>PRK09831 putative acyltransferase; Provisional
Probab=99.63 E-value=6.4e-15 Score=115.71 Aligned_cols=128 Identities=21% Similarity=0.190 Sum_probs=95.4
Q ss_pred CCCCChhhHHHHHHhhcCCCC----CCCchhHHHHhh--------c-CCCeEEEEEEECCEEEEEEEEEeeeccccCccc
Q psy16746 1 MNSRSPDYQANVLTSTSLRHS----GNYPLSWYKDIT--------S-EPSFYSLAALYNGVIIGLIVAEILQYTSLNKED 67 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp----~~~~~~~~~~~~--------~-~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~ 67 (247)
||.++++|.+.+.++....+. ..++.+..+.+. . ......+++..+|++||++.+.
T Consensus 3 ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~iiG~~~~~----------- 71 (147)
T PRK09831 3 IRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCI----------- 71 (147)
T ss_pred cccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHhcCceEEEEECCEEEEEEEeh-----------
Confidence 688999999999999765432 223332222111 0 0234567888999999998764
Q ss_pred hhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 68 KDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 68 ~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
..++..++|+|++||+|+|++|++++++.+. . +.+.. |..|++||+|+||+.++..
T Consensus 72 -------------~~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~---~-------l~v~~-~~~a~~~Y~k~Gf~~~g~~ 127 (147)
T PRK09831 72 -------------EHYIDMLFVDPEYTRRGVASALLKPLIKSES---E-------LTVDA-SITAKPFFERYGFQTVKQQ 127 (147)
T ss_pred -------------hceeeeEEECHHHcCCCHHHHHHHHHHHHhh---h-------eEeec-chhhHHHHHHCCCEEeecc
Confidence 1356789999999999999999999999886 3 33433 6789999999999999998
Q ss_pred cceeccCCcccceEEEEE
Q psy16746 148 PYYYSIKGRSRDGFTYVL 165 (247)
Q Consensus 148 ~~~~~~~g~~~d~~~m~~ 165 (247)
+ ...+|.+.|.+.|.+
T Consensus 128 ~--~~~~g~~~~~~~m~~ 143 (147)
T PRK09831 128 R--VECRGEWFINFYMRY 143 (147)
T ss_pred c--eEECCEEEEeeEEEe
Confidence 7 345688999888876
No 24
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.62 E-value=1.7e-14 Score=113.70 Aligned_cols=133 Identities=24% Similarity=0.296 Sum_probs=97.2
Q ss_pred CCCCC-hhhHHHHHHhhcCC----C-CCCCchhH---HHHhh-cCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhh
Q psy16746 1 MNSRS-PDYQANVLTSTSLR----H-SGNYPLSW---YKDIT-SEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDI 70 (247)
Q Consensus 1 ~~~~~-~~d~~~i~~l~~~~----f-p~~~~~~~---~~~~~-~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~ 70 (247)
+|.++ ++|++.|....... + ....+..+ +.+.+ ..+....+|++.+|+++|++.+......+
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~-------- 72 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDY-------- 72 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS--------
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccc--------
Confidence 46788 99999999987654 2 22222222 22233 35778899999999999999886422111
Q ss_pred hhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 71 LASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 71 ~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
........++.++|+|++||+|+|+.++..+++.++ +..+++++.+.+.+.|.+|+++|+|+||+.++...
T Consensus 73 -----~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~--~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~~ 143 (152)
T PF13523_consen 73 -----DADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLF--EDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEFE 143 (152)
T ss_dssp --------TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHH--TSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEEE
T ss_pred -----cCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHH--hCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEEE
Confidence 114567778889999999999999999999999999 44499999999999999999999999999999874
No 25
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.62 E-value=1e-14 Score=114.61 Aligned_cols=127 Identities=17% Similarity=0.149 Sum_probs=92.8
Q ss_pred CCCCChhhHH-HHHHhhcCCCCC-CCchhHHHHhh----cC-CCeEEEEEEE--CCEEEEEEEEEeeeccccCccchhhh
Q psy16746 1 MNSRSPDYQA-NVLTSTSLRHSG-NYPLSWYKDIT----SE-PSFYSLAALY--NGVIIGLIVAEILQYTSLNKEDKDIL 71 (247)
Q Consensus 1 ~~~~~~~d~~-~i~~l~~~~fp~-~~~~~~~~~~~----~~-~~~~~~va~~--~~~iVG~~~~~~~~~~~~~~~~~~~~ 71 (247)
||.++++|.+ .+..+.....+. +.+...+...+ .. .....++++. ++++||++.+.....
T Consensus 9 ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~----------- 77 (150)
T PLN02706 9 VRRLEISDKSKGFLELLQQLTVVGDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERK----------- 77 (150)
T ss_pred EeEhhhcccchHHHHHHHhccCCCCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEee-----------
Confidence 5678889987 477776554332 34433333332 22 3345566766 689999998763210
Q ss_pred hcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 72 ASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 72 ~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
........++|..++|+|+|||+|||+.|+++++++|+ +.|++++.+.+.+.|. +||+|+||+.++.
T Consensus 78 --~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~---~~g~~~i~l~~~~~N~---~~y~k~GF~~~g~ 144 (150)
T PLN02706 78 --FIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHAR---SAGCYKVILDCSEENK---AFYEKCGYVRKEI 144 (150)
T ss_pred --cccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HcCCCEEEEEeccccH---HHHHHCcCEEehh
Confidence 00123457788999999999999999999999999999 8999999999999885 5999999998764
No 26
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.60 E-value=5.2e-15 Score=112.85 Aligned_cols=122 Identities=16% Similarity=0.256 Sum_probs=90.9
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchh----HHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLS----WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~----~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
||.++++|++++.+|...+|+...+.. +...... ...+++++++|+|||.+.+.+..-.. ..
T Consensus 2 iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ivg~~~~~~~~~~~------------~g 67 (127)
T PF13527_consen 2 IRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYG--PGRCVVAEDDGKIVGHVGLIPRRLSV------------GG 67 (127)
T ss_dssp EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHH--TTEEEEEEETTEEEEEEEEEEEEEEE------------TT
T ss_pred ceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccC--cCcEEEEEECCEEEEEEEEEEEEEEE------------CC
Confidence 577899999999999999998765443 1222222 34678999999999999997643110 11
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEe
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLH 144 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 144 (247)
..-+.+++..++|+|+|||+|+|++|++++++.++ +.|+..+.+.. .+..||+++||+..
T Consensus 68 ~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~---~~g~~~~~l~~-----~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 68 KKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERAR---ERGVPFIFLFP-----SSPPFYRRFGFEYA 127 (127)
T ss_dssp EEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHH---HTT-SEEEEE------SSHHHHHHTTEEEE
T ss_pred EEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHH---hCCCCEEEEec-----CChhhhhcCCCEEC
Confidence 23357999999999999999999999999999998 88998776643 23689999999863
No 27
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.60 E-value=2e-14 Score=135.34 Aligned_cols=132 Identities=20% Similarity=0.263 Sum_probs=103.0
Q ss_pred CCCC-ChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEE--CCEEEEEEEEEeeeccccCccchhhhhcccCC
Q psy16746 1 MNSR-SPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALY--NGVIIGLIVAEILQYTSLNKEDKDILASSFDK 77 (247)
Q Consensus 1 ~~~~-~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~--~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (247)
||.+ +++|++++.++.......+....++......+...++++++ +|++||++....... .+..
T Consensus 85 IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~-------------~~~d 151 (547)
T TIGR03103 85 VRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRK-------------AFND 151 (547)
T ss_pred EEeCCChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccc-------------cccC
Confidence 3554 68999999999998776555554444444455667788875 589999997642110 0011
Q ss_pred CCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 78 ~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
.....+|..++|+|+|||+|+|++|+++++++++ +.|+..+.|.|...|.+|++||+|+||+.++...
T Consensus 152 ~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~---~~G~~~i~L~V~~~N~~Ai~fY~klGf~~~~~y~ 219 (547)
T TIGR03103 152 PEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQ---SRGCAYMDLSVMHDNEQAIALYEKLGFRRIPVFA 219 (547)
T ss_pred CCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HCCCCEEEEEEcCCCHHHHHHHHHCCCEEeeEEE
Confidence 2234678899999999999999999999999998 8999999999999999999999999999876543
No 28
>PRK10514 putative acetyltransferase; Provisional
Probab=99.60 E-value=1.9e-14 Score=112.26 Aligned_cols=131 Identities=15% Similarity=0.166 Sum_probs=92.0
Q ss_pred CCCCChhhHHHHHHhhcCCCC------CCCchhHHHHhhcC--CCeEEEEE-EECCEEEEEEEEEeeeccccCccchhhh
Q psy16746 1 MNSRSPDYQANVLTSTSLRHS------GNYPLSWYKDITSE--PSFYSLAA-LYNGVIIGLIVAEILQYTSLNKEDKDIL 71 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp------~~~~~~~~~~~~~~--~~~~~~va-~~~~~iVG~~~~~~~~~~~~~~~~~~~~ 71 (247)
||.++++|.+++.++....+. .......++..+.. +....+++ ..++++||++.+..
T Consensus 4 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~-------------- 69 (145)
T PRK10514 4 IRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG-------------- 69 (145)
T ss_pred eeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec--------------
Confidence 578899999999998765321 11112222221111 22233444 46789999987641
Q ss_pred hcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeeccee
Q psy16746 72 ASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYY 151 (247)
Q Consensus 72 ~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~ 151 (247)
.++..++|+|+|||+|+|++|++.+.+.+ +++.+.|...|.+|++||+|+||+..+..+ .
T Consensus 70 ----------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~--------~~i~~~v~~~N~~a~~~yek~Gf~~~~~~~--~ 129 (145)
T PRK10514 70 ----------GHMEALFVDPDVRGCGVGRMLVEHALSLH--------PELTTDVNEQNEQAVGFYKKMGFKVTGRSE--V 129 (145)
T ss_pred ----------CcEeEEEECHHhccCCHHHHHHHHHHHhc--------cccEEEeecCCHHHHHHHHHCCCEEecccc--c
Confidence 12456999999999999999999998854 356788999999999999999999998876 3
Q ss_pred ccCCcccceEEEEE
Q psy16746 152 SIKGRSRDGFTYVL 165 (247)
Q Consensus 152 ~~~g~~~d~~~m~~ 165 (247)
...|...+.+.|.+
T Consensus 130 ~~~~~~~~~~~~~~ 143 (145)
T PRK10514 130 DDQGRPYPLLHLAY 143 (145)
T ss_pred CCCCCccceEEEEe
Confidence 34566777776654
No 29
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.60 E-value=3.7e-14 Score=106.30 Aligned_cols=86 Identities=28% Similarity=0.317 Sum_probs=70.3
Q ss_pred hhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHH
Q psy16746 26 LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDN 105 (247)
Q Consensus 26 ~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~ 105 (247)
...++.++..+...++|++.+|++||++.+.. ...|..++|+|+|||+|+|++|++.
T Consensus 32 ~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~-----------------------~~~i~~l~v~p~~r~~Gig~~Ll~~ 88 (117)
T PF13673_consen 32 PEDLEEYLEEGSHTIFVAEEGGEIVGFAWLEP-----------------------DGEISHLYVLPEYRGRGIGRALLDA 88 (117)
T ss_dssp HHHHHHHHCTCCCEEEEEEETTEEEEEEEEET-----------------------CEEEEEEEE-GGGTTSSHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEECCEEEEEEEEcC-----------------------CCeEEEEEEChhhcCCcHHHHHHHH
Confidence 44555666666678899999999999998762 2238889999999999999999999
Q ss_pred HHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCC
Q psy16746 106 LISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141 (247)
Q Consensus 106 l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF 141 (247)
+++.++ . |++.+.+. .|..|.+||+++||
T Consensus 89 ~~~~~~---~-~~~~l~~~---~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 89 AEKEAK---D-GIRRLTVE---ANERARRFYRKLGF 117 (117)
T ss_dssp HHHHHT---T-TCEEEEEE---C-HHHHHHHHHTT-
T ss_pred HHHHHH---c-CCcEEEEE---eCHHHHHHHHhCCC
Confidence 999997 6 88877665 89999999999998
No 30
>KOG3216|consensus
Probab=99.60 E-value=2.3e-14 Score=110.38 Aligned_cols=129 Identities=20% Similarity=0.101 Sum_probs=101.0
Q ss_pred CCCCChhhHHHHHHhhcCCC-------CCCCchhHHHH--hhcCCCeEEEEEEE---CCEEEEEEEEEeeeccccCccch
Q psy16746 1 MNSRSPDYQANVLTSTSLRH-------SGNYPLSWYKD--ITSEPSFYSLAALY---NGVIIGLIVAEILQYTSLNKEDK 68 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~f-------p~~~~~~~~~~--~~~~~~~~~~va~~---~~~iVG~~~~~~~~~~~~~~~~~ 68 (247)
||.++|+|.+.+..|..+.- +..-.+.-+.. +.+.+-..++++.. ++.++|++.....-
T Consensus 6 IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~y--------- 76 (163)
T KOG3216|consen 6 IRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNY--------- 76 (163)
T ss_pred EEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeeccc---------
Confidence 57899999999988876532 22223333333 34445555666655 77999999988532
Q ss_pred hhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 69 DILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 69 ~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
++| ......||.+++|.|+|||+|+|+.|+..+-+.|. +.|+.+++..|...|.+|+.||++.|++....
T Consensus 77 ---stW--~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~---~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 77 ---STW--LGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEAD---KLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred ---ccc--cccceEEEEeeEecchhcccChHHHHHHHHHHHHH---HcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence 111 23468899999999999999999999999999998 99999999999999999999999999997665
No 31
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.57 E-value=3e-14 Score=114.85 Aligned_cols=118 Identities=10% Similarity=0.144 Sum_probs=89.5
Q ss_pred CCCCChhhHHHHHHhhcCCCCCC-CchhHHHHhhcCCCeEEEEEE-ECCEEEEEEEEEeeeccccCccchhhhhcccCCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGN-YPLSWYKDITSEPSFYSLAAL-YNGVIIGLIVAEILQYTSLNKEDKDILASSFDKH 78 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~-~~~~~~~~~~~~~~~~~~va~-~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (247)
||+++++|.+++..+........ +........... ...++++. .++++||++.+... .
T Consensus 8 iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~-~~~~~va~~~~~~iiG~~~~~~~-------------------~ 67 (169)
T PRK07922 8 VRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEA-VQEFWVAEHLDGEVVGCGALHVM-------------------W 67 (169)
T ss_pred eecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhh-cCcEEEEEecCCcEEEEEEEeec-------------------C
Confidence 57899999999999987654322 111112222222 23467887 88999999987642 1
Q ss_pred CcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 79 ~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
...+.|..++|+|++||+|+|++|+++++++++ +.|++++.+.+. +++||+|+||+..+.
T Consensus 68 ~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~---~~g~~~l~~~~~-----~~~fY~k~GF~~~~~ 127 (169)
T PRK07922 68 EDLAEIRTVAVDPAARGRGVGHAIVERLLDVAR---ELGLSRVFVLTF-----EVEFFARHGFVEIDG 127 (169)
T ss_pred CCceEEEEEEECHHHhCCCHHHHHHHHHHHHHH---HcCCCEEEEEec-----cHHHHHHCCCEECcc
Confidence 245778899999999999999999999999999 999999988664 368999999998754
No 32
>KOG3234|consensus
Probab=99.56 E-value=1.5e-14 Score=111.75 Aligned_cols=150 Identities=23% Similarity=0.319 Sum_probs=118.1
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcC-CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSE-PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHI 79 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~-~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (247)
||+..++|+-..-.++-....+.|+..++-.++.. ++.+......+++|.|++....+. ....
T Consensus 4 ~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg----------------~~~~ 67 (173)
T KOG3234|consen 4 IRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEG----------------KDTE 67 (173)
T ss_pred cccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccc----------------cCcc
Confidence 45566666666655555555566777776666555 555444444567899999987543 2244
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCcccc
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRD 159 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d 159 (247)
-.+++..+.|.|+||+.|+|+.||+.+++... ..+.-.+-|.|+.+|+-|+.+|+++||..-++...||.. |..+|
T Consensus 68 wh~HvTAltVap~~Rrl~la~~lm~~led~~d---~~~a~fvDLfVr~sN~iAI~mYkkLGY~~YR~Vi~YY~~-g~ded 143 (173)
T KOG3234|consen 68 WHGHVTALTVAPDYRRLGLAAKLMDTLEDVSD---VDNAYFVDLFVRVSNQIAIDMYKKLGYSVYRTVIEYYSV-GPDED 143 (173)
T ss_pred eeeEEEEEEechhHHHHHHHHHHHHHHHHHHH---hhhhheeeeeeeccchhHHHHHHhcCceEEEeeeeeecc-CCCcc
Confidence 57889999999999999999999999999997 777888999999999999999999999999999999975 67889
Q ss_pred eEEEEEEecCC
Q psy16746 160 GFTYVLYINGG 170 (247)
Q Consensus 160 ~~~m~~~l~~~ 170 (247)
++-|++.++.+
T Consensus 144 a~dMRKalSrD 154 (173)
T KOG3234|consen 144 AYDMRKALSRD 154 (173)
T ss_pred hHhhhhhhccC
Confidence 99898887644
No 33
>PRK07757 acetyltransferase; Provisional
Probab=99.55 E-value=5.4e-14 Score=110.68 Aligned_cols=118 Identities=22% Similarity=0.252 Sum_probs=88.0
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCch-hHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPL-SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHI 79 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~-~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (247)
|++++++|++.+.++.....+..... ...+...... ...+++..+|++||++.+... ..
T Consensus 4 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~lvG~~~l~~~-------------------~~ 63 (152)
T PRK07757 4 IRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENI-RDFYVAEEEGEIVGCCALHIL-------------------WE 63 (152)
T ss_pred EeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhcc-CcEEEEEECCEEEEEEEEEec-------------------cC
Confidence 57889999999999977654322111 1111222121 235778889999999988742 22
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
..++|..++|+|+|||+|+|++|++.+++.+. +.|++.+.+.+. +.+||+|+||+..+.
T Consensus 64 ~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~---~~g~~~i~~~~~-----~~~~Y~k~GF~~~~~ 122 (152)
T PRK07757 64 DLAEIRSLAVSEDYRGQGIGRMLVEACLEEAR---ELGVKRVFALTY-----QPEFFEKLGFREVDK 122 (152)
T ss_pred CceEEEEEEECHHHcCCCHHHHHHHHHHHHHH---hCCCCeEEEEeC-----cHHHHHHCCCEEccc
Confidence 45788899999999999999999999999998 889998876542 358999999999876
No 34
>PRK10562 putative acetyltransferase; Provisional
Probab=99.53 E-value=3.3e-13 Score=105.61 Aligned_cols=129 Identities=16% Similarity=0.265 Sum_probs=92.7
Q ss_pred CCCCChhhHHHHHHhhcCCC--CCCCch-h-HH------HHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhh
Q psy16746 1 MNSRSPDYQANVLTSTSLRH--SGNYPL-S-WY------KDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDI 70 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~f--p~~~~~-~-~~------~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~ 70 (247)
||.++++|++.+..+..... +.++.. . |. .+... +....+++..+|++||++.+..
T Consensus 2 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~iG~~~~~~------------- 67 (145)
T PRK10562 2 IREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYL-PAAQTWVWEEDGKLLGFVSVLE------------- 67 (145)
T ss_pred cccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhc-CcccEEEEEECCEEEEEEEEee-------------
Confidence 68899999999999965432 222211 1 11 11111 3345677888899999998752
Q ss_pred hhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecce
Q psy16746 71 LASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYY 150 (247)
Q Consensus 71 ~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~ 150 (247)
...+..++|+|+|||+|+|+.|++.+++.+ +.+.+.+...|.+|++||+|+||+.++.. +
T Consensus 68 ----------~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~--------~~~~~~v~~~N~~s~~~y~k~Gf~~~~~~--~ 127 (145)
T PRK10562 68 ----------GRFVGALFVAPKAVRRGIGKALMQHVQQRY--------PHLSLEVYQKNQRAVNFYHAQGFRIVDSA--W 127 (145)
T ss_pred ----------ccEEEEEEECHHHcCCCHHHHHHHHHHhhC--------CeEEEEEEcCChHHHHHHHHCCCEEcccc--c
Confidence 124677999999999999999998887743 45788899999999999999999999863 3
Q ss_pred eccCCcccceEEEEE
Q psy16746 151 YSIKGRSRDGFTYVL 165 (247)
Q Consensus 151 ~~~~g~~~d~~~m~~ 165 (247)
+. +.+.+..+|..
T Consensus 128 ~~--~~~~~~~~~~~ 140 (145)
T PRK10562 128 QE--ETQHPTWIMSW 140 (145)
T ss_pred cC--CCCCEEEEEEe
Confidence 33 23467776654
No 35
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.53 E-value=1.3e-13 Score=122.00 Aligned_cols=119 Identities=16% Similarity=0.092 Sum_probs=97.0
Q ss_pred CCCCChhhHHHHHHhhcCC--CC---CCCchhHHHHhhcCCCeEEEEEE--E---CCEEEEEEEEEeeeccccCccchhh
Q psy16746 1 MNSRSPDYQANVLTSTSLR--HS---GNYPLSWYKDITSEPSFYSLAAL--Y---NGVIIGLIVAEILQYTSLNKEDKDI 70 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~--fp---~~~~~~~~~~~~~~~~~~~~va~--~---~~~iVG~~~~~~~~~~~~~~~~~~~ 70 (247)
|+.++++|++.+..|.... |. ..++...+..++..+ . .+++. + ++.+||++.+..
T Consensus 189 Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~-~-~~~~~~~d~~gd~givG~~~~~~------------- 253 (320)
T TIGR01686 189 ISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKE-E-IVTVSMSDRFGDSGIIGIFVFEK------------- 253 (320)
T ss_pred EEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCC-C-EEEEEEEecCCCCceEEEEEEEe-------------
Confidence 4678999999999998876 53 346666677776555 2 33333 2 567999998764
Q ss_pred hhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEc--CCHHHHHHHHhCCCEEe
Q psy16746 71 LASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT--SNKPAIHFYEKRRFRLH 144 (247)
Q Consensus 71 ~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~--~N~~a~~fy~k~GF~~~ 144 (247)
....++|..++|+|++||+|+|++||+.+++.+. +.|++.+.+.+.+ .|.+|++||+++||+.+
T Consensus 254 -------~~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~---~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 254 -------KEGNLFIDDLCMSCRALGRGVETRMLRWLFEQAL---DLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred -------cCCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHH---HcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 2356789999999999999999999999999998 9999999999875 79999999999999864
No 36
>PLN02825 amino-acid N-acetyltransferase
Probab=99.53 E-value=7.1e-14 Score=129.66 Aligned_cols=121 Identities=14% Similarity=0.113 Sum_probs=93.0
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCc
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIE 80 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (247)
||.++++|++.|.+|..............++.+......++|++.||++||++.+.... ...
T Consensus 370 IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~ei~~f~V~e~Dg~IVG~aal~~~~------------------~~~ 431 (515)
T PLN02825 370 TRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRALDSFVVVEREGSIIACAALFPFF------------------EEK 431 (515)
T ss_pred heeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhcCCcEEEEEECCEEEEEEEEEeec------------------CCC
Confidence 68899999999999997653322111111111222223468889999999999876431 345
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.++|..++|+|+|||+|+|++||+++++.|+ +.|++.+.+.+ ..+.+||+++||+..+.
T Consensus 432 ~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar---~~G~~~L~Llt----t~a~~fY~k~GF~~~~~ 490 (515)
T PLN02825 432 CGEVAAIAVSPECRGQGQGDKLLDYIEKKAA---SLGLEKLFLLT----TRTADWFVRRGFSECSI 490 (515)
T ss_pred cEEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HCCCCEEEEEe----CcHHHHHHHCCCEEeCh
Confidence 7889999999999999999999999999998 99999999866 34689999999998775
No 37
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.52 E-value=9.3e-14 Score=128.01 Aligned_cols=121 Identities=17% Similarity=0.191 Sum_probs=90.1
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCc
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIE 80 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (247)
||.++++|++++..+........+...+.++.+......++++++++++||++.+.... ...
T Consensus 297 IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~va~~dg~iVG~~~~~~~~------------------~~~ 358 (441)
T PRK05279 297 LRRATIDDVGGILELIRPLEEQGILVRRSREQLEREIDKFTVIERDGLIIGCAALYPFP------------------EEK 358 (441)
T ss_pred eEeCCHHHHHHHHHHHHHHHHcCCccccCHHHHhcccCcEEEEEECCEEEEEEEEEEcC------------------CCC
Confidence 57789999999999864321111111111222222223467888999999999776421 235
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.++|..++|+|+|||+|+|++|++++++++. +.|++.+.+. |.++++||+|+||+..+.
T Consensus 359 ~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~---~~g~~~l~l~----~~~a~~fY~k~GF~~~g~ 417 (441)
T PRK05279 359 MGEMACLAVHPDYRGSGRGERLLKRIEQRAR---QLGLKRLFVL----TTRTAHWFLERGFVPVDV 417 (441)
T ss_pred eEEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HcCCCEEEEe----cchHHHHHHHCcCEECCh
Confidence 6889999999999999999999999999998 8999988763 346899999999999987
No 38
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.50 E-value=1.6e-13 Score=126.00 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=92.2
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCc
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIE 80 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (247)
||.++++|++++..+........+...+..+.+......+++++.++++||++.+.... ...
T Consensus 285 IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V~~~dg~iVG~~~~~~~~------------------~~~ 346 (429)
T TIGR01890 285 IRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYA------------------EED 346 (429)
T ss_pred eEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEEEEECCEEEEEEEEEecC------------------CCC
Confidence 57789999999999965433323322333333433333467788899999999887531 335
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.++|..++|+|+|||+|+|++||+++++++. +.|++.+.+ ...| +.+||+|+||+.++.
T Consensus 347 ~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~---~~G~~~l~v--~~~~--a~~fY~k~GF~~~g~ 405 (429)
T TIGR01890 347 CGEMACLAVSPEYQDGGRGERLLAHIEDRAR---QMGISRLFV--LTTR--TGHWFRERGFQTASV 405 (429)
T ss_pred eEEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HcCCCEEEE--eecc--hHHHHHHCCCEECCh
Confidence 6889999999999999999999999999999 899998764 3334 579999999999987
No 39
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.50 E-value=7.3e-13 Score=93.00 Aligned_cols=78 Identities=37% Similarity=0.496 Sum_probs=65.0
Q ss_pred CeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccC
Q psy16746 37 SFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENS 116 (247)
Q Consensus 37 ~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~ 116 (247)
...++++.+++++||++.+.. ..+..+|..++|+|++||+|+|+.|++.+.+.+. .
T Consensus 2 ~~~~~~~~~~~~ivG~~~~~~--------------------~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~---~- 57 (79)
T PF13508_consen 2 KERFFVAEDDGEIVGFIRLWP--------------------NEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAK---S- 57 (79)
T ss_dssp TEEEEEEEETTEEEEEEEEEE--------------------TTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHT---C-
T ss_pred ccEEEEEEECCEEEEEEEEEE--------------------cCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcC---C-
Confidence 356789999999999999864 3358899999999999999999999999988875 4
Q ss_pred CccEEEEEEEcCCHHHHHHHHhCCCEE
Q psy16746 117 SCKAIFLHVLTSNKPAIHFYEKRRFRL 143 (247)
Q Consensus 117 g~~~i~l~v~~~N~~a~~fy~k~GF~~ 143 (247)
+.+.+.+ |+.+..||+++||++
T Consensus 58 --~~i~l~~---~~~~~~fY~~~GF~~ 79 (79)
T PF13508_consen 58 --KKIFLFT---NPAAIKFYEKLGFEE 79 (79)
T ss_dssp --SEEEEEE---EHHHHHHHHHTTEEE
T ss_pred --CcEEEEE---cHHHHHHHHHCcCCC
Confidence 4455554 678999999999985
No 40
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.50 E-value=4.3e-13 Score=116.72 Aligned_cols=122 Identities=18% Similarity=0.199 Sum_probs=88.6
Q ss_pred hhHHHHHHhhcCCCCCC-----CchhHHHHhhcC---CCeEEEEEEE--CCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 7 DYQANVLTSTSLRHSGN-----YPLSWYKDITSE---PSFYSLAALY--NGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 7 ~d~~~i~~l~~~~fp~~-----~~~~~~~~~~~~---~~~~~~va~~--~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
.|.+.+.++....|+.. +....+...... .....+++.. +|++||++......
T Consensus 159 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~----------------- 221 (292)
T TIGR03448 159 PDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHP----------------- 221 (292)
T ss_pred cchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecC-----------------
Confidence 46677777776666421 223222221111 1223466666 58999997655321
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
.....++|..++|+|+|||+|+|++|+.+++++++ +.|++.+.+.|.+.|.+|++||+|+||+..+...
T Consensus 222 ~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~---~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~ 290 (292)
T TIGR03448 222 DEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLA---ARGLPAVMLYVEADNEAAVRTYEKLGFTVAEVDV 290 (292)
T ss_pred CCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HCCCCEEEEEEeCCCHHHHHHHHHcCCEEccccc
Confidence 12335677788999999999999999999999998 7899999999999999999999999999877643
No 41
>PRK10314 putative acyltransferase; Provisional
Probab=99.49 E-value=3.5e-13 Score=106.89 Aligned_cols=122 Identities=15% Similarity=0.094 Sum_probs=91.4
Q ss_pred CCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcC---CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCC
Q psy16746 2 NSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSE---PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKH 78 (247)
Q Consensus 2 ~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~---~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (247)
+..+++++.++..+....|-.+....+. +.-.. +....+++..++++||++.+.... ..
T Consensus 10 ~~l~~~~~~~~~~lR~~VF~~eq~~~~~-e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~-----------------~~ 71 (153)
T PRK10314 10 SELSVSQLYALLQLRCAVFVVEQNCPYQ-DIDGDDLTGDNRHILGWKNDELVAYARILKSD-----------------DD 71 (153)
T ss_pred hhCCHHHHHHHHHHHHHHhhhhcCCCcc-ccCCCCCCCCcEEEEEEECCEEEEEEEEecCC-----------------CC
Confidence 3567888999999999988544222211 22111 235567788899999999887421 12
Q ss_pred CcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 79 ~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
...++|..++|+|+|||+|+|++||+++++.+. ...+...+.|++ +..+..||+|+||+.++.
T Consensus 72 ~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~--~~~~~~~i~L~a---~~~a~~fY~k~GF~~~g~ 134 (153)
T PRK10314 72 LEPVVIGRVIVSEALRGEKVGQQLMSKTLESCT--RHWPDKPVYLGA---QAHLQNFYQSFGFIPVTE 134 (153)
T ss_pred CCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHH--HHCCCCcEEEeh---HHHHHHHHHHCCCEECCC
Confidence 235789999999999999999999999999997 234777787765 567889999999998875
No 42
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.48 E-value=7.2e-13 Score=115.31 Aligned_cols=120 Identities=13% Similarity=0.038 Sum_probs=91.1
Q ss_pred CCCChhhHHHHHHhhcCCCCC----CCchhHHHHhhcC--CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhccc
Q psy16746 2 NSRSPDYQANVLTSTSLRHSG----NYPLSWYKDITSE--PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSF 75 (247)
Q Consensus 2 ~~~~~~d~~~i~~l~~~~fp~----~~~~~~~~~~~~~--~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~ 75 (247)
+..+++|+++|..|...++.. +++......+... .....+++.+++++||++.+....
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~---------------- 67 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQVLRGLREPGAGHTRHLVAVDSDPIVGYANLVPAR---------------- 67 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHhhccccCCCCceEEEEEECCEEEEEEEEEcCC----------------
Confidence 457899999999998855432 2455554444221 234567888899999999877421
Q ss_pred CCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 76 ~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
....++..++|+|+|||+|||++|++.+++.+. ..+.+.+...|.+|++||+++||+.....
T Consensus 68 ---~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~-------~~~~~~~~~~n~~a~~fy~~~Gf~~~~~~ 129 (292)
T TIGR03448 68 ---GTDPAMAELVVHPAHRRRGIGRALIRALLAKGG-------GRLRVWAHGDLPAARALASRLGLVPTREL 129 (292)
T ss_pred ---CCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc-------CceEEEEcCCCHHHHHHHHHCCCEEccEE
Confidence 123568889999999999999999999999764 45777888899999999999999987653
No 43
>PHA01807 hypothetical protein
Probab=99.47 E-value=6.1e-13 Score=105.34 Aligned_cols=87 Identities=16% Similarity=0.101 Sum_probs=70.9
Q ss_pred CCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhc
Q psy16746 35 EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAE 114 (247)
Q Consensus 35 ~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~ 114 (247)
+.....++++.+|++||++.+..... ........+..++|+|+|||+|||+.||+.++++++
T Consensus 50 ~~~~~~lva~~dg~lvG~~~l~~~~~---------------~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar--- 111 (153)
T PHA01807 50 SNDRTELLVFRDGKLAGIAVLVFEDD---------------PHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAG--- 111 (153)
T ss_pred CCCceEEEEEECCEEEEEEEEEcCCC---------------cceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHH---
Confidence 34566688889999999998864320 011223334557999999999999999999999999
Q ss_pred cCCccEEEEEEEcCCHHHHHHHHhC
Q psy16746 115 NSSCKAIFLHVLTSNKPAIHFYEKR 139 (247)
Q Consensus 115 ~~g~~~i~l~v~~~N~~a~~fy~k~ 139 (247)
+.|+..+.++|..+|.+|++||++.
T Consensus 112 ~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 112 EGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred HCCCCEEEEEecCCcHHHHHHHHhc
Confidence 8999999999999999999999985
No 44
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.45 E-value=4.5e-13 Score=128.06 Aligned_cols=118 Identities=18% Similarity=0.163 Sum_probs=90.9
Q ss_pred CCCCChhhHHHHHHhhcCCCCCC--CchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGN--YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKH 78 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~--~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (247)
||+++++|++++..+...++... ++.. .+.+. .....+++++.+|++||++.+... .
T Consensus 466 IR~a~~~D~~~I~~L~~~~~~~~~~~~~~-~~~l~-~~~~~~~Va~~~g~IVG~~~l~~~-------------------~ 524 (614)
T PRK12308 466 VRPARLTDIDAIEGMVAYWAGLGENLPRS-RNELV-RDIGSFAVAEHHGEVTGCASLYIY-------------------D 524 (614)
T ss_pred EEECCHHHHHHHHHHHHHHHhhhcccccC-HHHHh-cccCcEEEEEECCEEEEEEEEEEc-------------------C
Confidence 57789999999999987654321 2211 11222 223456888999999999987642 2
Q ss_pred CcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 79 ~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
...++|..++|+|+|||+|||+.|++.++++++ +.|++.+.+.+ .+.+||+|+||+.++..
T Consensus 525 ~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak---~~g~~~i~l~~-----~a~~FYek~GF~~~~~~ 585 (614)
T PRK12308 525 SGLAEIRSLGVEAGWQVQGQGSALVQYLVEKAR---QMAIKKVFVLT-----RVPEFFMKQGFSPTSKS 585 (614)
T ss_pred CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HCCCCEEEEee-----CcHHHHHHCCCEECCcc
Confidence 246789999999999999999999999999998 89999998754 34699999999988754
No 45
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.43 E-value=5.9e-13 Score=103.62 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=94.2
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCC----chhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNY----PLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~----~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
||.++..|...|++|.+.+....- +.+.++..+.+ +.+++.+|++||++.+.+.
T Consensus 3 iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~d----F~i~E~~g~viGC~aL~~~------------------ 60 (153)
T COG1246 3 IRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDD----FTIIERDGKVIGCAALHPV------------------ 60 (153)
T ss_pred eeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhh----heeeeeCCcEEEEEeeccc------------------
Confidence 688999999999999987765321 22223333322 4678889999999999852
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
...+.+.+.+++|+|++||+|+|..|++.++..|+ +.|++.+++.+. .+..||+++||+....
T Consensus 61 ~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar---~~gi~~lf~LTt----~~~~~F~~~GF~~vd~ 123 (153)
T COG1246 61 LEEDLGELRSLAVHPDYRGSGRGERLLERLLADAR---ELGIKELFVLTT----RSPEFFAERGFTRVDK 123 (153)
T ss_pred CccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHH---HcCCceeeeeec----ccHHHHHHcCCeECcc
Confidence 26689999999999999999999999999999999 999999988653 4568999999997654
No 46
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=99.43 E-value=2.7e-12 Score=103.05 Aligned_cols=105 Identities=29% Similarity=0.298 Sum_probs=90.2
Q ss_pred CEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEE
Q psy16746 47 GVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVL 126 (247)
Q Consensus 47 ~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~ 126 (247)
+++||.+.+..... ......+.|+ ++++|+++|+|+|+.++..++++++ +..+++++.+.|.
T Consensus 77 ~~~iG~~~~~~~~~---------------~~~~~~~~ig-~~l~~~~~g~G~~tea~~~~l~~~f--~~~~l~ri~~~~~ 138 (187)
T COG1670 77 GELIGVIGLSDIDR---------------AANGDLAEIG-YWLDPEYWGKGYATEALRALLDYAF--EELGLHRIEATVD 138 (187)
T ss_pred CeEEEEEEEEEecc---------------ccccceEEEE-EEEChHHhcCchHHHHHHHHHHHhh--hhcCceEEEEEec
Confidence 48999999986421 0134466666 8889999999999999999999999 5699999999999
Q ss_pred cCCHHHHHHHHhCCCEEeeeecceeccCCcccceEEEEEEecC
Q psy16746 127 TSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYING 169 (247)
Q Consensus 127 ~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d~~~m~~~l~~ 169 (247)
+.|.+|+++++|+||+.++..+.....+|.+.|.+.+.+....
T Consensus 139 ~~N~~S~rv~ek~Gf~~eg~~~~~~~~~g~~~d~~~~~~~~~e 181 (187)
T COG1670 139 PENEASIRVYEKLGFRLEGELRQHEFIKGRWRDTVLYSLLRDE 181 (187)
T ss_pred CCCHHHHHHHHHcCChhhhhhhhceeeCCeeeeEEEEEEechh
Confidence 9999999999999999999988887778899999999887653
No 47
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.40 E-value=7.3e-12 Score=96.75 Aligned_cols=122 Identities=21% Similarity=0.266 Sum_probs=88.9
Q ss_pred CCCCChhhHHHHHHhhcCC----C---CCC-Cch----hHHHHhhcC---CCeEEEEEEEC--CEEEEEEEEEeeecccc
Q psy16746 1 MNSRSPDYQANVLTSTSLR----H---SGN-YPL----SWYKDITSE---PSFYSLAALYN--GVIIGLIVAEILQYTSL 63 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~----f---p~~-~~~----~~~~~~~~~---~~~~~~va~~~--~~iVG~~~~~~~~~~~~ 63 (247)
|++.+++|.+.+..+.+.. + +.. .+. .++...... ....++++.++ +++||++.+....
T Consensus 4 lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~---- 79 (142)
T PF13302_consen 4 LRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNID---- 79 (142)
T ss_dssp EEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEE----
T ss_pred EEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecc----
Confidence 4677899999999998521 1 111 122 233321111 12556666654 4799999995331
Q ss_pred CccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCE
Q psy16746 64 NKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142 (247)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~ 142 (247)
.....+.++ ++|.|++||+|+|+.++..++++++ +..|++++.+.+.+.|.+|+++++|+||+
T Consensus 80 -------------~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~--~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 80 -------------KNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAF--EELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp -------------TTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHH--HTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred -------------cCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHH--hcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 245678777 9999999999999999999999997 58999999999999999999999999996
No 48
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.37 E-value=1.4e-11 Score=98.52 Aligned_cols=144 Identities=18% Similarity=0.185 Sum_probs=109.5
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcC----CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSE----PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~----~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
|+.-+|.|+++|..+....|.. ..+...-+.++. .....+||.++|++||.+.++...-. .
T Consensus 6 ir~e~~~d~~~i~~~~~~aF~~-~~e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~--------------g 70 (171)
T COG3153 6 IRTETPADIPAIEALTREAFGP-GREAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVG--------------G 70 (171)
T ss_pred EEecChhhHHHHHHHHHHHhhc-chHHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEec--------------C
Confidence 4677899999999999999982 222222222222 45678999999999999999975411 1
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCc
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGR 156 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~ 156 (247)
......-+..++|+|++||+|||++|++..++.++ ..|...+.+.= + ..+|.|+||+......-+.. +.
T Consensus 71 ~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~---~~G~~~v~vlG---d---p~YY~rfGF~~~~~~~l~~p--~~ 139 (171)
T COG3153 71 EELGWLGLAPLAVDPEYQGQGIGSALVREGLEALR---LAGASAVVVLG---D---PTYYSRFGFEPAAGAKLYAP--GP 139 (171)
T ss_pred cccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHH---HCCCCEEEEec---C---cccccccCcEEccccccccC--CC
Confidence 34467778999999999999999999999999999 99999886533 2 25999999999887655543 22
Q ss_pred ccceEEEEEEecCC
Q psy16746 157 SRDGFTYVLYINGG 170 (247)
Q Consensus 157 ~~d~~~m~~~l~~~ 170 (247)
..+...|++.+.++
T Consensus 140 ~~~~~fl~~~L~~~ 153 (171)
T COG3153 140 VPDERFLALELGDG 153 (171)
T ss_pred CCCceEEEEEccCC
Confidence 56778888888654
No 49
>PRK01346 hypothetical protein; Provisional
Probab=99.37 E-value=8.4e-12 Score=113.95 Aligned_cols=131 Identities=10% Similarity=0.067 Sum_probs=95.6
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcC-CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCC
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSE-PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHI 79 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~-~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (247)
||.++++|++++.++....|+...+....+.+... +....+++.++|++||++.+...... .......
T Consensus 9 iR~~~~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~-----------~~~~~~~ 77 (411)
T PRK01346 9 IRTATEEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLT-----------VPGGAVL 77 (411)
T ss_pred eecCCHHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccc-----------cCCCCcc
Confidence 57789999999999999999764433333222211 23346788899999999987642100 0001123
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecce
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYY 150 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~ 150 (247)
..++|..++|+|+|||+|+|++||+++++.++ +.|+..+.|.+.. .+||+|+||........+
T Consensus 78 ~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~---~~g~~~~~L~~~~-----~~~Y~r~Gf~~~~~~~~~ 140 (411)
T PRK01346 78 PAAGVTAVTVAPTHRRRGLLTALMREQLRRIR---ERGEPVAALTASE-----GGIYGRFGYGPATYSQSL 140 (411)
T ss_pred ceeEEEEEEEChhhcCCCHHHHHHHHHHHHHH---HCCCcEEEEECCc-----hhhHhhCCCeeccceEEE
Confidence 57899999999999999999999999999998 8899877776432 369999999987765433
No 50
>PRK13688 hypothetical protein; Provisional
Probab=99.34 E-value=1.7e-11 Score=97.48 Aligned_cols=114 Identities=12% Similarity=0.083 Sum_probs=77.8
Q ss_pred CCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcE
Q psy16746 2 NSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEV 81 (247)
Q Consensus 2 ~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (247)
+..+++|+.++.++...+|.. .+...++++.+++++||++.+...+.. ...........
T Consensus 21 ~~~~~~dl~~l~~l~~~~f~~------------~~~~~~~~~~~~~~~VG~~~l~~~dg~---------~~~~~~~~~~~ 79 (156)
T PRK13688 21 REFGNQELSMLEELQANIIEN------------DSESPFYGIYYGDSLVARMSLYKKGGV---------EEPYFEDTQDY 79 (156)
T ss_pred HHhcHHHHHHHHhhhhhEeec------------CCCCCEEEEEECCEEEEEEEEEecCCc---------ccccccCCCCe
Confidence 456667777777776666631 133455778899999999877532100 00011234567
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 82 ~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
++|..++|+|+|||+|+|++|++.+.+ .++. + .+...| .|.+||+|+||+..+..
T Consensus 80 ~~L~~l~V~p~~rgkGiG~~Ll~~a~~-------~~~~-~--~~~~~~-~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 80 LELWKLEVLPKYQNRGYGEMLVDFAKS-------FQLP-I--KTIARN-KSKDFWLKLGFTPVEYK 134 (156)
T ss_pred EEEEEEEECHHHcCCCHHHHHHHHHHH-------hCCe-E--EEEecc-chHHHHHhCCCEEeEEe
Confidence 899999999999999999999985443 3332 2 344555 57899999999999876
No 51
>KOG2488|consensus
Probab=99.24 E-value=4.1e-11 Score=95.74 Aligned_cols=94 Identities=24% Similarity=0.380 Sum_probs=80.4
Q ss_pred CCeEEEEEEECC-EEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhc
Q psy16746 36 PSFYSLAALYNG-VIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAE 114 (247)
Q Consensus 36 ~~~~~~va~~~~-~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~ 114 (247)
....+++|..++ ++|||..+.... .....++|+..+-|.+.|||+|||+.||+.+...+.
T Consensus 90 ~~~~Yi~a~~~~~~~vgf~~Frf~v----------------d~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~--- 150 (202)
T KOG2488|consen 90 RKLRYICAWNNKSKLVGFTMFRFTV----------------DTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLAD--- 150 (202)
T ss_pred ccceEEEEEcCCCceeeEEEEEEEc----------------ccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHH---
Confidence 455667777766 899999998643 234569999999999999999999999999999998
Q ss_pred cCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 115 NSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 115 ~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
....+.|.|+|...|.+|++||+++||.....-|
T Consensus 151 ~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~sp 184 (202)
T KOG2488|consen 151 SRHMRKVMLTVFSENIRALGFYHRLGFVVDEESP 184 (202)
T ss_pred HHHhhhheeeeecccchhHHHHHHcCcccCCCCC
Confidence 8888899999999999999999999999765433
No 52
>KOG3396|consensus
Probab=99.23 E-value=7.8e-11 Score=89.17 Aligned_cols=89 Identities=22% Similarity=0.335 Sum_probs=74.4
Q ss_pred eEEEEEEEC--CEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhcc
Q psy16746 38 FYSLAALYN--GVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAEN 115 (247)
Q Consensus 38 ~~~~va~~~--~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~ 115 (247)
++..|+++. ++|||.+++.++. .....-+..++|..+.|++++||+++|+.|+..+++.++ .
T Consensus 53 Y~i~Vied~~s~~vigtatL~IE~-------------KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k---~ 116 (150)
T KOG3396|consen 53 YYIVVIEDKESEKVIGTATLFIER-------------KFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAK---S 116 (150)
T ss_pred EEEEEEEeCCcCeEEEEEEEEEeh-------------hhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHH---h
Confidence 666666663 6899999988642 112345668899999999999999999999999999999 9
Q ss_pred CCccEEEEEEEcCCHHHHHHHHhCCCEEee
Q psy16746 116 SSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145 (247)
Q Consensus 116 ~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g 145 (247)
+|+-.+.|.+.+.| +.||+|+||+..+
T Consensus 117 lgcYKi~LdC~~~n---v~FYeKcG~s~~~ 143 (150)
T KOG3396|consen 117 LGCYKIILDCDPKN---VKFYEKCGYSNAG 143 (150)
T ss_pred cCcEEEEEecchhh---hhHHHHcCccccc
Confidence 99999999998887 4699999999665
No 53
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.22 E-value=8.3e-11 Score=102.68 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=66.5
Q ss_pred eEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCC
Q psy16746 38 FYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSS 117 (247)
Q Consensus 38 ~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g 117 (247)
..+++..++|++||++.+.. ..|..++|+|+|||+|+|++||+++++.++ +.|
T Consensus 6 ~~~~v~~~~~~iVG~~~l~~------------------------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~---~~g 58 (297)
T cd02169 6 YTVGIFDDAGELIATGSIAG------------------------NVLKCVAVCPKYQGEGLALKIVSELINKAY---EEG 58 (297)
T ss_pred EEEEEEEECCEEEEEEEecc------------------------CEEEEEEECHHHcCCCHHHHHHHHHHHHHH---HCC
Confidence 44566677899999986641 248889999999999999999999999998 899
Q ss_pred ccEEEEEEEcCCHHHHHHHHhCCCEEee
Q psy16746 118 CKAIFLHVLTSNKPAIHFYEKRRFRLHS 145 (247)
Q Consensus 118 ~~~i~l~v~~~N~~a~~fy~k~GF~~~g 145 (247)
+..+.|.+... +..||+|+||+..+
T Consensus 59 ~~~i~L~t~~~---~~~fYek~GF~~~~ 83 (297)
T cd02169 59 IFHLFLFTKPK---NAKFFRGLGFKELA 83 (297)
T ss_pred CCEEEEEEccc---HHHHHHHCCCEEec
Confidence 99999987654 36899999999998
No 54
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.18 E-value=3.6e-10 Score=80.88 Aligned_cols=61 Identities=31% Similarity=0.351 Sum_probs=52.4
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 82 ~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
+.|..+.|+|++||+|+|+.++.++.+.+. +.|.. ..+.+..+|.+|+++|+|+||+....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~---~~g~~-~~l~v~~~N~~s~~ly~klGf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELL---ERGKT-PFLYVDADNEASIRLYEKLGFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHH---HTTSE-EEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHH---hCCCc-EEEEEECCCHHHHHHHHHcCCEEEEE
Confidence 678899999999999999999999999998 77765 56889999999999999999998754
No 55
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.05 E-value=1.7e-09 Score=95.81 Aligned_cols=83 Identities=17% Similarity=0.109 Sum_probs=70.8
Q ss_pred CeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccC
Q psy16746 37 SFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENS 116 (247)
Q Consensus 37 ~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~ 116 (247)
....+++.++|++||++.+.. ..|..++|+|+|||+|+|+.|+.++++.+. +.
T Consensus 30 ~d~~vv~~~~~~lVg~g~l~g------------------------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~---~~ 82 (332)
T TIGR00124 30 LEIFIAVYEDEEIIGCGGIAG------------------------NVIKCVAIDESLRGEGLALQLMTELENLAY---EL 82 (332)
T ss_pred CCEEEEEEECCEEEEEEEEec------------------------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHH---Hc
Confidence 356678888999999998641 137789999999999999999999999999 99
Q ss_pred CccEEEEEEEcCCHHHHHHHHhCCCEEeeeecc
Q psy16746 117 SCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPY 149 (247)
Q Consensus 117 g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~ 149 (247)
|+..+.+.+.+.| ..||+++||...+..+.
T Consensus 83 G~~~l~l~Tk~~~---~~fy~klGF~~i~~~~~ 112 (332)
T TIGR00124 83 GRFHLFIFTKPEY---AALFEYCGFKTLAEAKD 112 (332)
T ss_pred CCCEEEEEECchH---HHHHHHcCCEEeeeecc
Confidence 9999999887655 46999999999987653
No 56
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.03 E-value=2e-09 Score=90.63 Aligned_cols=86 Identities=21% Similarity=0.214 Sum_probs=72.2
Q ss_pred EEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEE
Q psy16746 42 AALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAI 121 (247)
Q Consensus 42 va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i 121 (247)
-...+|+||..+.... ..+..+.|..++++|+|||+|+|++|+..+.+... +.|...+
T Consensus 181 f~~~d~~iVa~A~t~a-------------------~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL---~eGk~~~ 238 (268)
T COG3393 181 FLEGDGKIVAKAETAA-------------------ENPAYAQINGVYTHPEYRGKGYATALVATLAAKLL---AEGKIPC 238 (268)
T ss_pred EEccCCcEEEeeeccc-------------------cCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHH---hCCCeeE
Confidence 3344559998887664 36678999999999999999999999999999988 7777654
Q ss_pred EEEEEcCCHHHHHHHHhCCCEEeeeecce
Q psy16746 122 FLHVLTSNKPAIHFYEKRRFRLHSFLPYY 150 (247)
Q Consensus 122 ~l~v~~~N~~a~~fy~k~GF~~~g~~~~~ 150 (247)
|.+...|+.|.+.|+|.||+..|....+
T Consensus 239 -L~~~~~N~~A~~iY~riGF~~~g~~~~~ 266 (268)
T COG3393 239 -LFVNSDNPVARRIYQRIGFREIGEFREY 266 (268)
T ss_pred -EEEecCCHHHHHHHHHhCCeecceEEEE
Confidence 5578999999999999999999976544
No 57
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.93 E-value=9.6e-09 Score=81.20 Aligned_cols=92 Identities=20% Similarity=0.113 Sum_probs=76.1
Q ss_pred eEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCC
Q psy16746 38 FYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSS 117 (247)
Q Consensus 38 ~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g 117 (247)
..+|....++++||++.++..-.+. + ....++|+ +.|.|+.||+|+|+.+|..+++.|+ ..|
T Consensus 69 ~~y~~v~~d~~ivG~i~lRh~Ln~~-------l-------l~~gGHIG-Y~VrPseR~KGYA~emLkl~L~~ar---~lg 130 (174)
T COG3981 69 STYWAVDEDGQIVGFINLRHQLNDF-------L-------LEEGGHIG-YSVRPSERRKGYAKEMLKLALEKAR---ELG 130 (174)
T ss_pred eeEEEEecCCcEEEEEEeeeecchH-------H-------HhcCCccc-ceeChhhhccCHHHHHHHHHHHHHH---HcC
Confidence 4455556679999999998542111 1 11256677 9999999999999999999999999 999
Q ss_pred ccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 118 CKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 118 ~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
++.+.+++..+|.+|.+.-+++|-..+...
T Consensus 131 i~~Vlvtcd~dN~ASrkvI~~NGGile~~~ 160 (174)
T COG3981 131 IKKVLVTCDKDNIASRKVIEANGGILENEF 160 (174)
T ss_pred CCeEEEEeCCCCchhhHHHHhcCCEEeEEE
Confidence 999999999999999999999998887764
No 58
>KOG3397|consensus
Probab=98.87 E-value=2.1e-08 Score=79.16 Aligned_cols=120 Identities=14% Similarity=0.157 Sum_probs=89.3
Q ss_pred CChhhHHHHHHhhcCCCCCCCchhHHHHhhcC----CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCC
Q psy16746 4 RSPDYQANVLTSTSLRHSGNYPLSWYKDITSE----PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHI 79 (247)
Q Consensus 4 ~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~----~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (247)
..|+-+++..+|..+.||..-.. -....-.+ +-...+.-+...++||..-++... ...
T Consensus 20 ~rPELlk~~~~LIN~eWPRS~Ts-R~hSL~~ScDs~P~sL~Ll~E~~~~VigH~rLS~i~-----------------n~~ 81 (225)
T KOG3397|consen 20 DRPELLKESMTLINSEWPRSDTS-REHSLKKSCDSPPMSLLLLNEENDEVLGHSRLSHLP-----------------NRD 81 (225)
T ss_pred ccHHHHHHHHHHHhccCCccchh-hhhhhhcccCCCCeeeeeecccccceeeeeccccCC-----------------CCC
Confidence 35778888888888888854322 12222222 223334445566899999887542 455
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
...++.++.|+.+.||+|.|+.||+.++++++ ..|++.++|.+... .+||+++||+...-..
T Consensus 82 ~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R---~~gf~~~yLsT~DQ----~~FYe~lGYe~c~Pi~ 143 (225)
T KOG3397|consen 82 HALWVESVVVKKDQRGLGFGKFLMKSTEKWMR---EKGFNEAYLSTDDQ----CRFYESLGYEKCDPIV 143 (225)
T ss_pred ceeEEEEEEEehhhccccHHHHHHHHHHHHHH---Hhhhhheeeecccc----hhhhhhhcccccCcee
Confidence 78889999999999999999999999999999 99999999977553 4899999999765443
No 59
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.82 E-value=2.9e-07 Score=75.39 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=81.9
Q ss_pred hHHHHhhcCCCeEEEEEEECC--EEEEEEEEEeeeccc-------cC---ccchhhhhcc--------cCCCCcEEEEEE
Q psy16746 27 SWYKDITSEPSFYSLAALYNG--VIIGLIVAEILQYTS-------LN---KEDKDILASS--------FDKHIEVGYILS 86 (247)
Q Consensus 27 ~~~~~~~~~~~~~~~va~~~~--~iVG~~~~~~~~~~~-------~~---~~~~~~~~~~--------~~~~~~~~~I~~ 86 (247)
.-+..++..|+...+++..++ +|+|.+.+..+..-. +. ....++++-. .......+.|..
T Consensus 16 nDL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvR 95 (196)
T PF13718_consen 16 NDLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVR 95 (196)
T ss_dssp HHHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEE
T ss_pred HHHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEE
Confidence 345567777999999999999 999999998765311 00 1111111111 112345788999
Q ss_pred EEeCcccccCCHHHHHHHHHHHHH-------------------------hhhccCCccEEEEEEEcCCHHHHHHHHhCCC
Q psy16746 87 LGVSEDYRRNGIASLLLDNLISHL-------------------------TTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141 (247)
Q Consensus 87 l~V~p~~rg~GiG~~Ll~~l~~~a-------------------------~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF 141 (247)
|+|+|++|++|+|+++++.+++++ . ..+++.+-. ..--++.-.+||+|+||
T Consensus 96 IAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~---~~~vDylGt-SFG~t~~Ll~FW~k~gf 171 (196)
T PF13718_consen 96 IAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRR---PPGVDYLGT-SFGATPELLKFWQKNGF 171 (196)
T ss_dssp EEE-CCC-SSSHHHHHHHHHHHT--------------------------------S-SEEEE-EEE--HHHHHHHHCTT-
T ss_pred EEEChhhhcCCHHHHHHHHHHHHHhhhccccccccccccccccccccccc---ccCCCEEEe-ccCCCHHHHHHHHHCCc
Confidence 999999999999999999999998 3 457776655 34447888999999999
Q ss_pred EEeeeecceeccCCcccceEEEEEEec
Q psy16746 142 RLHSFLPYYYSIKGRSRDGFTYVLYIN 168 (247)
Q Consensus 142 ~~~g~~~~~~~~~g~~~d~~~m~~~l~ 168 (247)
..+......-...| +-..+|.+.++
T Consensus 172 ~pv~l~~~~n~~SG--e~S~imlr~ls 196 (196)
T PF13718_consen 172 VPVYLGQTRNEASG--EHSAIMLRPLS 196 (196)
T ss_dssp EEEEE-SS--TTT-----EEEEEEE--
T ss_pred EEEEEecCcccccC--ceeeeEEeecC
Confidence 99877554433334 55677777653
No 60
>KOG4144|consensus
Probab=98.74 E-value=1.2e-08 Score=79.04 Aligned_cols=137 Identities=19% Similarity=0.261 Sum_probs=92.5
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCch--hHHHHhhcC-CCeE--------EEEEEECCEEEEEEEEEeeeccccCccchh
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYPL--SWYKDITSE-PSFY--------SLAALYNGVIIGLIVAEILQYTSLNKEDKD 69 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~~--~~~~~~~~~-~~~~--------~~va~~~~~iVG~~~~~~~~~~~~~~~~~~ 69 (247)
||..-++++.++..|....||..--. +...+.+.+ +.-. .+.-...+.+||++.....++..+..++-.
T Consensus 14 irp~i~e~~q~~~~Lea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E~lt~ESm~ 93 (190)
T KOG4144|consen 14 IRPGIPESCQRRHTLEASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKERLTQESMT 93 (190)
T ss_pred CCCCChHHHHHHhccccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccCcchhhhHHHHh
Confidence 56778999999999999999865322 222222222 2211 112234788999999887665544333322
Q ss_pred hhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 70 ILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 70 ~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.. ...+....|++++|+|+||.+|.|+.|+...++..- .+.-..++.| -...+-+-||+++||+.+|.
T Consensus 94 kh----~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~--~q~i~~r~~L---i~h~pLvPFYEr~gFk~vgp 161 (190)
T KOG4144|consen 94 KH----RSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLG--SQPIVRRAAL---ICHDPLVPFYERFGFKAVGP 161 (190)
T ss_pred hh----hcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhh--cCccccceee---eecCCccchhHhcCceeecc
Confidence 22 335566899999999999999999999999666665 2333445533 33557889999999998876
No 61
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.73 E-value=9e-08 Score=62.17 Aligned_cols=63 Identities=29% Similarity=0.342 Sum_probs=53.8
Q ss_pred EEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccE
Q psy16746 41 LAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKA 120 (247)
Q Consensus 41 ~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~ 120 (247)
+++..+++++|++.+...+ .....+++..++|+|++||+|+|+.++..++++++ +.|++.
T Consensus 2 ~~~~~~~~~ig~~~~~~~~-----------------~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~---~~~~~~ 61 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDG-----------------SGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEAR---ERGAKR 61 (65)
T ss_pred EEEecCCEEEEEEEEEecC-----------------CCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHH---HcCCcE
Confidence 4566789999999998642 13467889999999999999999999999999999 789988
Q ss_pred EEE
Q psy16746 121 IFL 123 (247)
Q Consensus 121 i~l 123 (247)
+.+
T Consensus 62 v~~ 64 (65)
T cd04301 62 LRL 64 (65)
T ss_pred EEe
Confidence 865
No 62
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.71 E-value=2.8e-07 Score=79.11 Aligned_cols=92 Identities=16% Similarity=0.138 Sum_probs=69.5
Q ss_pred CeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccC
Q psy16746 37 SFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENS 116 (247)
Q Consensus 37 ~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~ 116 (247)
.++.+++..+|+||..+..... ..+...|. +.++|+|||+|+|+++..+++..|. +.
T Consensus 164 ~G~Gf~i~~~~~iVs~~~s~~~-------------------~~~~~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl---~~ 220 (265)
T PF12746_consen 164 NGFGFCILHDGEIVSGCSSYFV-------------------YENGIEID-IETHPEYRGKGLATAVAAAFILECL---EN 220 (265)
T ss_dssp H--EEEEEETTEEEEEEEEEEE-------------------ETTEEEEE-EEE-CCCTTSSHHHHHHHHHHHHHH---HT
T ss_pred cCcEEEEEECCEEEEEEEEEEE-------------------ECCEEEEE-EEECHHhhcCCHHHHHHHHHHHHHH---HC
Confidence 3578899999999987766643 33567787 9999999999999999999999999 88
Q ss_pred CccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccC
Q psy16746 117 SCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIK 154 (247)
Q Consensus 117 g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~ 154 (247)
|+....=. .|.+|+++-+|+||+.......|+-.+
T Consensus 221 ~l~P~WDc---~N~~S~~lA~kLGf~~~~~Y~~Y~v~~ 255 (265)
T PF12746_consen 221 GLYPSWDC---HNLASIALAEKLGFHFDFEYTAYEVNN 255 (265)
T ss_dssp T-EEE-EE---SSHHHHHHHHHCT--EEEEEEEE----
T ss_pred CCCcCeeC---CCHHHHHHHHHcCCcccceeeeeeecc
Confidence 88776442 699999999999999999988887543
No 63
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.70 E-value=1.6e-07 Score=87.92 Aligned_cols=91 Identities=14% Similarity=0.212 Sum_probs=66.1
Q ss_pred EEEEEEE---CCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEE-----------eCcccccCCHHHHHHH
Q psy16746 39 YSLAALY---NGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLG-----------VSEDYRRNGIASLLLD 104 (247)
Q Consensus 39 ~~~va~~---~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~-----------V~p~~rg~GiG~~Ll~ 104 (247)
..|.... ++.+||++-+.......... .....+.|..+. ++++|||+|+|+.||+
T Consensus 412 e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~-----------~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~ 480 (522)
T TIGR01211 412 EFFLSYEDPKNDILIGFLRLRFPSEPAHRK-----------EVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLE 480 (522)
T ss_pred eEEEEEEcCCCCeEEEEEEEecCccccccc-----------ccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHH
Confidence 4455554 57899999988643211100 011233444343 4699999999999999
Q ss_pred HHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 105 NLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 105 ~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
++++.|+ +.|++.+.+. .|..|++||+|+||+..+.
T Consensus 481 ~ae~~Ar---~~G~~~i~v~---s~~~A~~FY~klGf~~~g~ 516 (522)
T TIGR01211 481 EAERIAA---EEGSEKILVI---SGIGVREYYRKLGYELDGP 516 (522)
T ss_pred HHHHHHH---HCCCCEEEEe---eCchHHHHHHHCCCEEEcc
Confidence 9999999 8899999863 3889999999999998765
No 64
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.69 E-value=6.5e-08 Score=72.98 Aligned_cols=134 Identities=16% Similarity=0.070 Sum_probs=94.7
Q ss_pred CCChhhHHHHHHhhcCCCCC-CCc-hhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCc
Q psy16746 3 SRSPDYQANVLTSTSLRHSG-NYP-LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIE 80 (247)
Q Consensus 3 ~~~~~d~~~i~~l~~~~fp~-~~~-~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (247)
.....|.+++++|....--. .+. .+.+-.+... .|++..+|.+.|++...-...+..+.+ ++ -...+.++
T Consensus 12 D~~apd~aavLaLNNeha~elswLe~erL~~l~~e----AF~ArR~G~l~afl~tFd~~a~ydSpN---Fl-WFrErYe~ 83 (167)
T COG3818 12 DVRAPDLAAVLALNNEHALELSWLELERLYRLYKE----AFVARRDGNLAAFLVTFDSSARYDSPN---FL-WFRERYEN 83 (167)
T ss_pred hhcCCchhhHHhccchhhhhccccCHHHHHHHHHH----HHHHhhccchhhheeeccccccCCCCc---ee-ehhhhCCc
Confidence 34445888888887654322 121 1222233322 157888888888877653332221111 11 01135688
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEE--cCCHHHHHHHHhCCCEEeeee
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVL--TSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~--~~N~~a~~fy~k~GF~~~g~~ 147 (247)
+.||..+.|....||+|+|++|.+.+.+++. ..|...+.++|. +.|++|..|.-.+||.++|.-
T Consensus 84 F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae---~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a 149 (167)
T COG3818 84 FFYVDRVVVASRARGRGVARALYADLFSYAE---LAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQA 149 (167)
T ss_pred eEEEEEEEEEecccccchHHHHHHHHHHHHH---hcCCceEEEEecCCCCChHHHHHhhhcCceEccce
Confidence 9999999999999999999999999999998 999999998875 679999999999999999864
No 65
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.65 E-value=1.8e-07 Score=71.98 Aligned_cols=122 Identities=16% Similarity=0.042 Sum_probs=86.1
Q ss_pred CCCChhhHHHHHHhhcCCCCC----CCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCC
Q psy16746 2 NSRSPDYQANVLTSTSLRHSG----NYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDK 77 (247)
Q Consensus 2 ~~~~~~d~~~i~~l~~~~fp~----~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (247)
+..+...+-+++.|..+.|-. +|++---.+.+. ...+.++-..+|++|+++-+.+.. ..
T Consensus 11 ~~Lt~~ely~LlkLRv~VFVVEQ~CPY~E~Dg~Dl~~-~~~Hl~~~~~~g~LvAyaRLl~~~----------------~~ 73 (155)
T COG2153 11 NDLTVRELYELLKLRVDVFVVEQNCPYPELDGKDLLG-DTRHLLGWTPDGELVAYARLLPPG----------------AE 73 (155)
T ss_pred hhcCHHHHHHHHHhheeEEEEecCCCCcCcCCccccc-ccceEEEEcCCCeEEEEEecCCCC----------------CC
Confidence 345667777888888887754 355532223322 244445555599999999877542 11
Q ss_pred CCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 78 ~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.. ...|+.+.|+|+.||+|+|..||+.+++.+. +.-.-+.+++. .......||.+.||...+.
T Consensus 74 ~~-~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~--~~~p~~~v~l~---AQahLq~fYa~~GFv~~~e 136 (155)
T COG2153 74 YE-EVSIGRVIVSPAARGQGLGQQLMEKALETAG--REWPDKPVYLG---AQAHLQDFYASFGFVRVGE 136 (155)
T ss_pred cC-ceeeeeEEECHhhhccchhHHHHHHHHHHHH--hhCCCCCeEEe---hHHHHHHHHHHhCcEEcCc
Confidence 22 3669999999999999999999999999997 33334555443 3667889999999998875
No 66
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.59 E-value=8.1e-07 Score=67.27 Aligned_cols=112 Identities=17% Similarity=0.194 Sum_probs=71.1
Q ss_pred CCCChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcE
Q psy16746 2 NSRSPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEV 81 (247)
Q Consensus 2 ~~~~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (247)
...++.|..++..+. |. +..+.++..+ ......|+|..|++++|.+.+.. .+..
T Consensus 8 ~~ls~Qd~iDL~KIw----p~-~~~~~l~~~l-~~~~~l~aArFNdRlLgAv~v~~--------------------~~~~ 61 (128)
T PF12568_consen 8 TTLSEQDRIDLAKIW----PQ-QDPEQLEQWL-DEGHRLFAARFNDRLLGAVKVTI--------------------SGQQ 61 (128)
T ss_dssp SS--HHHHHHHHHH-----TT-S-----------SSEEEEEEEETTEEEEEEEEEE--------------------ETTE
T ss_pred CCCCHHHHHHHHHhC----CC-CCHHHHHHHh-ccCCeEEEEEechheeeeEEEEE--------------------cCcc
Confidence 456777777776666 43 3333334444 45778899999999999999886 3468
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEE---cCC-HHHHHHHHhCCCEEe
Q psy16746 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVL---TSN-KPAIHFYEKRRFRLH 144 (247)
Q Consensus 82 ~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~---~~N-~~a~~fy~k~GF~~~ 144 (247)
+.+..++|++--||+|+|.-|++.+.+.+ .+++...+... +.+ .....|.+.+||...
T Consensus 62 ~~L~~l~VRevTRrRGVG~yLlee~~rq~-----p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~ 123 (128)
T PF12568_consen 62 AELSDLCVREVTRRRGVGLYLLEEVLRQL-----PDIKHWWLADEGVEPQDRAVMAAFMQACGFSAQ 123 (128)
T ss_dssp EEEEEEEE-TT-SSSSHHHHHHHHHHHHS------S--EEEE--TT-S--THHHHHHHHHHHT-EE-
T ss_pred eEEeeEEEeeccccccHHHHHHHHHHHHC-----CCCcEEEEecCCCcccchHHHHHHHHHcCcccc
Confidence 99999999999999999999999999975 45666665432 122 455689999999754
No 67
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.48 E-value=4.4e-06 Score=80.47 Aligned_cols=157 Identities=13% Similarity=0.080 Sum_probs=103.6
Q ss_pred ChhhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECC-EEEEEEEEEeeeccc---------cCccchhhhhcc
Q psy16746 5 SPDYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNG-VIIGLIVAEILQYTS---------LNKEDKDILASS 74 (247)
Q Consensus 5 ~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~-~iVG~~~~~~~~~~~---------~~~~~~~~~~~~ 74 (247)
+++.+.++..+....+-...|. -+..++..|+..++++..++ ++|+.+.+......+ ......++++..
T Consensus 438 ~ee~Lr~~~gllV~AHYRnsP~-DL~~L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~ 516 (758)
T COG1444 438 DEELLRQVYGLLVSAHYRNSPN-DLRRLLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDL 516 (758)
T ss_pred CHHHHHHHHhHHhhhhccCCHH-HHHHHhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHH
Confidence 3555556666665554433333 34456666888889988877 888888776543210 001111111111
Q ss_pred c--------CCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 75 F--------DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 75 ~--------~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
. ......+.|..|+|+|++|++|||+.|++++.+++. .|++.+-+ -.-.++.-.+|+.|+||..+..
T Consensus 517 l~~~~~~~~fa~l~G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~----~~~Dwlgv-sFG~t~~L~rFW~rnGF~pVhl 591 (758)
T COG1444 517 LAKHHRDPEFAKLVGWRIVRIAVHPELQRMGIGSRLLALLIEEAR----KGLDWLGV-SFGYTEELLRFWLRNGFVPVHL 591 (758)
T ss_pred HHHhhcchhhcccceeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh----cCCCEEee-ccCCCHHHHHHHHHcCeEEEEe
Confidence 0 112345779999999999999999999999999983 56666655 3445788999999999999988
Q ss_pred ecceeccCCcccceEEEEEEecC
Q psy16746 147 LPYYYSIKGRSRDGFTYVLYING 169 (247)
Q Consensus 147 ~~~~~~~~g~~~d~~~m~~~l~~ 169 (247)
.+..=...| .-..+|.++|++
T Consensus 592 s~~rn~~SG--eys~i~lkpLs~ 612 (758)
T COG1444 592 SPTRNASSG--EYTAIVLKPLSD 612 (758)
T ss_pred cCccCcCCC--ceeEEEEecCCH
Confidence 765544444 346677777753
No 68
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.37 E-value=6e-06 Score=57.85 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=55.4
Q ss_pred EEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccE
Q psy16746 41 LAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKA 120 (247)
Q Consensus 41 ~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~ 120 (247)
|.+..+|+.+|.+.... .++...|....|.|++||+|+|+.|++.++++++ +.|.+
T Consensus 2 F~~~~~g~~~a~l~Y~~--------------------~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~---~~~~k- 57 (78)
T PF14542_consen 2 FELKDDGEEIAELTYRE--------------------DGGVIVITHTEVPPELRGQGIAKKLVEAALDYAR---ENGLK- 57 (78)
T ss_dssp EEEESSTTEEEEEEEEE--------------------SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHH---HTT-E-
T ss_pred EEEEECCEEEEEEEEEe--------------------CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHH---HCCCE-
Confidence 34566788999998864 4578889999999999999999999999999998 88875
Q ss_pred EEEEEEcCCHHHHHHHHhC
Q psy16746 121 IFLHVLTSNKPAIHFYEKR 139 (247)
Q Consensus 121 i~l~v~~~N~~a~~fy~k~ 139 (247)
|.|.-+-+.++++++
T Consensus 58 ----v~p~C~y~~~~~~~h 72 (78)
T PF14542_consen 58 ----VVPTCSYVAKYFRRH 72 (78)
T ss_dssp ----EEETSHHHHHHHHH-
T ss_pred ----EEEECHHHHHHHHhC
Confidence 455566666777664
No 69
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.36 E-value=1.2e-06 Score=62.29 Aligned_cols=61 Identities=18% Similarity=0.222 Sum_probs=56.1
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEe
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLH 144 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 144 (247)
..+++..-++.|+|||+|+.+.++.+..+.+. +.|+ -++.+|..+|..++++.+++||...
T Consensus 18 qtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~---~~g~-P~Y~hv~~~N~~~~r~~~~lg~~~~ 78 (89)
T PF08444_consen 18 QTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLH---KLGF-PFYGHVDEDNEASQRLSKSLGFIFM 78 (89)
T ss_pred ccccccccccCHhHhcCCHHHHHHHHHHHHHH---HCCC-CeEeehHhccHHHHHHHHHCCCeec
Confidence 36778888999999999999999999999998 8998 4899999999999999999999965
No 70
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=98.12 E-value=6.6e-06 Score=72.11 Aligned_cols=121 Identities=14% Similarity=0.072 Sum_probs=83.9
Q ss_pred ChhhHHHHHHhhcCCCCCCCch---hHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcE
Q psy16746 5 SPDYQANVLTSTSLRHSGNYPL---SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEV 81 (247)
Q Consensus 5 ~~~d~~~i~~l~~~~fp~~~~~---~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (247)
+..-+.+++.+....+..+... ..+...+.. .-.+|+.++.++++-+...+-. --|.+..-..
T Consensus 5 ak~s~kE~i~~~s~~~~k~~~~~~~~~f~kil~~--~n~~vi~~nqkl~s~L~i~~f~------------~~f~~q~l~t 70 (389)
T COG4552 5 AKASFKEFIGLESYAFWKPLVPTDGAVFVKILAE--PNSYVIYMNQKLASRLHIPPFI------------FWFGNQVLPT 70 (389)
T ss_pred cccchHHHHhHHHHHhcCccccchhhhhhhhccC--CcceEEeehhhhhhcccccchh------------eeeCCeeeec
Confidence 4445566666665555443322 223333333 3346888888998887765311 1111334567
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 82 ~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
+.|..++++|+|||+|..++|+.+..+... +.|+....|+. .+.+||+|.||..-+..
T Consensus 71 ~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~---~kG~p~s~L~P-----~s~~iYrKfGye~asn~ 128 (389)
T COG4552 71 AGIAGVASAPTYRRRGALRALLAHSLREIA---RKGYPVSALHP-----FSGGIYRKFGYEYASNY 128 (389)
T ss_pred cceEEEEechhhccCcHHHHHHHHHHHHHH---HcCCeeEEecc-----CchhhHhhccccccceE
Confidence 889999999999999999999999999998 99998887743 55789999999987763
No 71
>KOG4135|consensus
Probab=98.05 E-value=1.6e-05 Score=61.51 Aligned_cols=65 Identities=14% Similarity=0.164 Sum_probs=58.9
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
..+.+.-+.-.|.-||+|+|+.++.+++.++. ...++....+.+...|.+++++|+|++|..+..
T Consensus 106 ~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~--s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 106 ITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAY--SVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred eeeeEEEEEecccccCCCccHHHHHHHHHHHH--HHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 46778877788999999999999999999998 567899999999999999999999999998765
No 72
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.96 E-value=0.00014 Score=54.20 Aligned_cols=90 Identities=12% Similarity=0.107 Sum_probs=64.8
Q ss_pred HhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHH
Q psy16746 31 DITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHL 110 (247)
Q Consensus 31 ~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a 110 (247)
.+-+.+....+....+|.+||++.+..... .+...-.-+..+.|-..|||+|+|++...+.-...
T Consensus 30 ~~w~~~~~~~~~~~~~~~~igf~l~L~~~~---------------~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~ 94 (143)
T COG5628 30 TYWRDPVREAWLFRIGGLPVGFALVLDLAH---------------SPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSA 94 (143)
T ss_pred hhhcCcccceeEEEECCceeeeeeeecccC---------------CCCcccccchheEeeehhhccchhHHHHHHHHHHh
Confidence 333444444567788999999998874321 12223344667889999999999999999888765
Q ss_pred hhhccCCccEEEEEEEcCCHHHHHHHHhCCCE
Q psy16746 111 TTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142 (247)
Q Consensus 111 ~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~ 142 (247)
. | .-.+-+.++|.+|++|+++.-..
T Consensus 95 ~-----g--~w~Va~i~EN~PA~~fwK~~~~t 119 (143)
T COG5628 95 W-----G--VWQVATVRENTPARAFWKRVAET 119 (143)
T ss_pred h-----c--eEEEEEeccCChhHHHHHhhhcc
Confidence 4 3 34555788999999999997655
No 73
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.78 E-value=9.4e-05 Score=53.98 Aligned_cols=66 Identities=20% Similarity=0.133 Sum_probs=56.3
Q ss_pred CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhcc
Q psy16746 36 PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAEN 115 (247)
Q Consensus 36 ~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~ 115 (247)
.....+++..+|..+|.+.... ...+...|..-.|.+++||||+|++|+.++++.++ +
T Consensus 13 ~~~~~y~~~~~G~~~~e~~y~~-------------------~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar---~ 70 (99)
T COG2388 13 GENGRYVLTDEGEVIGEATYYD-------------------RGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAR---E 70 (99)
T ss_pred cCceEEEEecCCcEEEEEEEec-------------------CCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHH---H
Confidence 5566788889999999998874 25578889999999999999999999999999999 8
Q ss_pred CCccEEEE
Q psy16746 116 SSCKAIFL 123 (247)
Q Consensus 116 ~g~~~i~l 123 (247)
.|.+-+-+
T Consensus 71 ~g~kiiP~ 78 (99)
T COG2388 71 AGLKIIPL 78 (99)
T ss_pred cCCeEccc
Confidence 88865544
No 74
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.77 E-value=0.00039 Score=56.61 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=91.2
Q ss_pred ChhhHHHHHHhhcCCCCCC--Cc----hhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeecccc-Cccchhhhhc-ccC
Q psy16746 5 SPDYQANVLTSTSLRHSGN--YP----LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSL-NKEDKDILAS-SFD 76 (247)
Q Consensus 5 ~~~d~~~i~~l~~~~fp~~--~~----~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~-~~~~~~~~~~-~~~ 76 (247)
++++++++..+....|-.. |. .....+....++..++++.++|+++|++-+.+...+++ .+.-..++.. ...
T Consensus 6 ~~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p 85 (182)
T PF00765_consen 6 SRRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAP 85 (182)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCC
Confidence 4567778888777766533 22 22222333445667778888899999999987766654 3333344422 234
Q ss_pred CCCcEEEEEEEEeCccccc------CCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 77 KHIEVGYILSLGVSEDYRR------NGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg------~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
....++++..++|+++.++ .-+...|+..+.++|. +.|++.+...+ ..+..+++++.||.....-+
T Consensus 86 ~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~---~~gi~~~v~V~---~~~~~r~l~r~G~~~~~lG~ 157 (182)
T PF00765_consen 86 RSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFAL---SNGIRHIVGVV---DPAMERILRRAGWPVRRLGP 157 (182)
T ss_dssp SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHH---CTT-SEEEEEE---EHHHHHHHHHCT-EEEESSE
T ss_pred CCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHH---HCCCCEEEEEE---ChHHHHHHHHcCCceEECCC
Confidence 4578999999999998543 2477899999999999 99999997766 45789999999999876533
No 75
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.72 E-value=0.0013 Score=50.06 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=75.2
Q ss_pred CChhhHHHHHHhhcCC-------CCCCCchhHHHHhhcC----CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhh
Q psy16746 4 RSPDYQANVLTSTSLR-------HSGNYPLSWYKDITSE----PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILA 72 (247)
Q Consensus 4 ~~~~d~~~i~~l~~~~-------fp~~~~~~~~~~~~~~----~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~ 72 (247)
.++++++.+.++.... ++.+.+..++++++.. .....+++..+|++||+.....
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~--------------- 90 (142)
T PF13480_consen 26 TDPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFR--------------- 90 (142)
T ss_pred CCHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEE---------------
Confidence 3677888887776432 2223455677766644 4567788889999999998774
Q ss_pred cccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEE
Q psy16746 73 SSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLH 124 (247)
Q Consensus 73 ~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~ 124 (247)
.....+....+++|++++.+.|..|+..+++++. +.|++.+-+.
T Consensus 91 -----~~~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~---~~g~~~~d~g 134 (142)
T PF13480_consen 91 -----HGGTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAI---ERGLRYFDFG 134 (142)
T ss_pred -----ECCEEEEEEEEECHhhHhCCHHHHHHHHHHHHHH---HCCCCEEEEC
Confidence 3357777888999999999999999999999999 8999887663
No 76
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.69 E-value=5.9e-05 Score=53.56 Aligned_cols=44 Identities=34% Similarity=0.505 Sum_probs=40.9
Q ss_pred EEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCC
Q psy16746 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141 (247)
Q Consensus 87 l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF 141 (247)
+.|+|++||+|+|+.|++.+++.+. ..|+. .|..+..+|++.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~---~~g~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWAR---KRGIS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHH---HcCce--------ehHHHHHHHHhcCC
Confidence 9999999999999999999999998 76665 68899999999999
No 77
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.66 E-value=0.00032 Score=60.30 Aligned_cols=102 Identities=17% Similarity=0.144 Sum_probs=71.9
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCcccceEEE
Q psy16746 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTY 163 (247)
Q Consensus 84 I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d~~~m 163 (247)
|-.++|++.+||-|++-+|+.++++.+. ++|...+.+.+.+.+ ..+|+.+||.++...+... ++|
T Consensus 59 ikcvAvs~s~qGeGl~lkl~TeLin~ay---~~g~~hLFiyTKp~~---~~lFk~~GF~~i~~~~~~i---------vlm 123 (352)
T COG3053 59 IKCVAVSESLQGEGLALKLVTELINLAY---ERGRTHLFIYTKPEY---AALFKQCGFSEIASAENVI---------VLM 123 (352)
T ss_pred eEEEEechhcccccHHHHHHHHHHHHHH---HcCCceEEEEechhH---HHHHHhCCceEeeccCceE---------EEe
Confidence 5679999999999999999999999999 999999999887755 5799999999887654332 222
Q ss_pred EEEecCCCCCcchhHHHHHHHHHhhhhhccccccCCcchhhhhhhhhhc
Q psy16746 164 VLYINGGHAAWSLCDYVKHWCESLYSKEFLSKKKGIRNWLVCIKYLKCQ 212 (247)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 212 (247)
.. .+..+.+++..+.. ... +.....+-.|-+-||...
T Consensus 124 EN------s~trl~~y~~~L~k----~r~--~gkkIgaIVMNANPFTLG 160 (352)
T COG3053 124 EN------SATRLKDYLSSLKK----LRH--PGKKIGAIVMNANPFTLG 160 (352)
T ss_pred ec------CchhHHHHHHHHHH----hcc--CCCeeEEEEEeCCCccch
Confidence 22 12334444444433 222 556666666666666543
No 78
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.44 E-value=0.0014 Score=54.22 Aligned_cols=130 Identities=13% Similarity=0.043 Sum_probs=97.2
Q ss_pred CCChhhHHHHHHhhcCCCCCC----CchhHHHHhhcCCCeEEEEEEECC-EEEEEEEEEeeeccccCccchhhhhcccCC
Q psy16746 3 SRSPDYQANVLTSTSLRHSGN----YPLSWYKDITSEPSFYSLAALYNG-VIIGLIVAEILQYTSLNKEDKDILASSFDK 77 (247)
Q Consensus 3 ~~~~~d~~~i~~l~~~~fp~~----~~~~~~~~~~~~~~~~~~va~~~~-~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (247)
-..|.++++...+....|..+ .+...+..+ .......+.|..++ ++||.....+- ...
T Consensus 8 l~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~al-~~~GGlvlgAf~~dg~lVGls~G~pg----------------~r~ 70 (266)
T COG3375 8 LTDPAELDEAEDVQASAWGSEDRDGAPADTIRAL-RYHGGLVLGAFSADGRLVGLSYGYPG----------------GRG 70 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCccccccchHHHHHHH-HhcCCeEEEEEcCCCcEEEEEeccCC----------------cCC
Confidence 457889999999998877654 233444422 23466778887766 99999876641 112
Q ss_pred CCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHH-HHHhCCCEEeeeecceec
Q psy16746 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH-FYEKRRFRLHSFLPYYYS 152 (247)
Q Consensus 78 ~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~-fy~k~GF~~~g~~~~~~~ 152 (247)
.....|-+.++|.|++++.|+|-+|-..--+++. .+|+..|.-+-.|-|.-.-+ -..|+|=...-..++||.
T Consensus 71 g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~---~~G~tli~WTfDPl~alNA~fNi~KLGa~artYi~nfYg 143 (266)
T COG3375 71 GSLYLYSHMLGVREEVKGSGLGVALKMKQRERAL---SMGYTLIAWTFDPLNALNARFNISKLGAIARTYIKNFYG 143 (266)
T ss_pred CceeeeeeehhccccccccchhhhhHHHHHHHHH---hcCeeeEEEecccchhhhhhcchhhhceeEEEeeccccc
Confidence 2336777889999999999999999999999998 99999999988888754333 367888887777888885
No 79
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.41 E-value=0.0044 Score=51.52 Aligned_cols=137 Identities=9% Similarity=0.058 Sum_probs=89.8
Q ss_pred CChhhHHHHHHhhcCCCCCC--C----chhHHHHhhcCCCeEEEEEE-ECCEEEEEEEEEeeeccccCcc-chhhhh-cc
Q psy16746 4 RSPDYQANVLTSTSLRHSGN--Y----PLSWYKDITSEPSFYSLAAL-YNGVIIGLIVAEILQYTSLNKE-DKDILA-SS 74 (247)
Q Consensus 4 ~~~~d~~~i~~l~~~~fp~~--~----~~~~~~~~~~~~~~~~~va~-~~~~iVG~~~~~~~~~~~~~~~-~~~~~~-~~ 74 (247)
..+++++++.++....|-.. | +.....+........++++. .+|++||++=+.+...+.+... -..++. ..
T Consensus 13 ~~~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~ 92 (207)
T PRK13834 13 REASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGR 92 (207)
T ss_pred cCHHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCC
Confidence 44678888888877776532 2 11111122223444555544 5679999998876554443222 222322 12
Q ss_pred cCCCCcEEEEEEEEeCcccccC---C----HHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 75 FDKHIEVGYILSLGVSEDYRRN---G----IASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 75 ~~~~~~~~~I~~l~V~p~~rg~---G----iG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.....+++++..++|++++++. + +...|+..+.+++. ..|++.+...+ +....+.+++.|+.....
T Consensus 93 ~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~---~~Gi~~~~~v~---~~~~~r~l~r~G~~~~~l 165 (207)
T PRK13834 93 LNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSM---ANGYTEIVTAT---DLRFERILARAGWPMQRL 165 (207)
T ss_pred CCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHH---HCCCCEEEEEE---CHHHHHHHHHcCCCeEEC
Confidence 3346789999999999986322 2 66789999999998 99999997755 346778999999987644
No 80
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.29 E-value=0.0044 Score=48.92 Aligned_cols=103 Identities=15% Similarity=0.149 Sum_probs=71.2
Q ss_pred CChhhHHHHHHhhcCCC--------CCCCchhHHHHhhcCCCe---EEEEEE--ECCEEEEEEEEEeeeccccCccchhh
Q psy16746 4 RSPDYQANVLTSTSLRH--------SGNYPLSWYKDITSEPSF---YSLAAL--YNGVIIGLIVAEILQYTSLNKEDKDI 70 (247)
Q Consensus 4 ~~~~d~~~i~~l~~~~f--------p~~~~~~~~~~~~~~~~~---~~~va~--~~~~iVG~~~~~~~~~~~~~~~~~~~ 70 (247)
-++++++++..|...-| -..|+.+++...+..|+. +.+... ..+++|||+.+-+..-.-
T Consensus 32 ~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~irv-------- 103 (162)
T PF01233_consen 32 NDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATIRV-------- 103 (162)
T ss_dssp TSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEEEE--------
T ss_pred CCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEEEEE--------
Confidence 35677788888765544 334888999988887543 334443 468999999987643110
Q ss_pred hhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEE
Q psy16746 71 LASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAI 121 (247)
Q Consensus 71 ~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i 121 (247)
........+|.-++|+...|.++++.-|+.++.+.+. ..|+-+-
T Consensus 104 ----~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn---~~gI~qA 147 (162)
T PF01233_consen 104 ----RDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVN---LQGIWQA 147 (162)
T ss_dssp ----TTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHH---TTT--EE
T ss_pred ----eeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhh---hcCceee
Confidence 1223468899999999999999999999999999997 7776544
No 81
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.19 E-value=0.022 Score=46.24 Aligned_cols=122 Identities=15% Similarity=0.151 Sum_probs=73.2
Q ss_pred ChhhHHHHHHhhcCCCCCCCchhHHHHhhcC-CC-eEEEEEEE--CCEEEEEEEEEeeeccccCccchhhhhcccCCCCc
Q psy16746 5 SPDYQANVLTSTSLRHSGNYPLSWYKDITSE-PS-FYSLAALY--NGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIE 80 (247)
Q Consensus 5 ~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~-~~-~~~~va~~--~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (247)
+.+.++++..+....- ..+-..-+..+..+ +. ....++.. .+++|+.+.+..-. +++ ...+..
T Consensus 11 ~~e~~d~fmk~~g~~r-~~Fk~~Di~~wk~sf~~~Y~l~~~~~KgT~~via~~~~~~~~--~l~----------~~~d~p 77 (181)
T PF06852_consen 11 PQEYFDQFMKLHGNER-WNFKRNDIKLWKESFDDDYWLVLTCLKGTDRVIATVHLIRFD--PLN----------PSPDKP 77 (181)
T ss_pred CHHHHHHHHHHhcCCc-ccccHHHHHHHHHhhccCeEEEEEEEcCCCcEEEEEEEEEec--cCC----------CCCCCC
Confidence 4567788877776632 12333333333322 22 43333333 35688777664321 111 012456
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHh-CCCEEeee
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK-RRFRLHSF 146 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k-~GF~~~g~ 146 (247)
...++.++++|+|||+|+++.+-+.+.+... . ...... ...|..+.++|.+ +||...+.
T Consensus 78 l~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~---~-~~~N~~---~~~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 78 LQFIGFFWIDPEYRGKGIMKLQDDICMDELD---S-VDDNSV---AQGNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred eEEEeeeeeCCcccCcchHHHHHHHHHHHhc---c-CCCcee---eecCHHHHHHHHHHhCCCCCcc
Confidence 8889999999999999999766666666654 3 233332 3357788899998 59887776
No 82
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=97.13 E-value=0.0055 Score=52.14 Aligned_cols=135 Identities=14% Similarity=0.142 Sum_probs=83.3
Q ss_pred ChhhHHHHHHhhcCCCCCC--Cc------hhHHHHhhcCCCeEEEEEEE--CCEEEEEEEEEeee----ccccCccch--
Q psy16746 5 SPDYQANVLTSTSLRHSGN--YP------LSWYKDITSEPSFYSLAALY--NGVIIGLIVAEILQ----YTSLNKEDK-- 68 (247)
Q Consensus 5 ~~~d~~~i~~l~~~~fp~~--~~------~~~~~~~~~~~~~~~~va~~--~~~iVG~~~~~~~~----~~~~~~~~~-- 68 (247)
+++++.++..+....|-.+ ++ .....+...... ..+++.+ +|++||++-+.... ...++.+..
T Consensus 15 ~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~~~-~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~e~~~~ 93 (241)
T TIGR03694 15 TPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDAHS-VHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPFEKHCS 93 (241)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCCCC-cEEEEEECCCCCEEEEEEEeccccccccccccHHHHhc
Confidence 5566777877776666322 21 111112222223 3344433 58999999887632 111221110
Q ss_pred hhh-hcccC----CCCcEEEEEEEEeCcccccC--------C--------------------HHHHHHHHHHHHHhhhcc
Q psy16746 69 DIL-ASSFD----KHIEVGYILSLGVSEDYRRN--------G--------------------IASLLLDNLISHLTTAEN 115 (247)
Q Consensus 69 ~~~-~~~~~----~~~~~~~I~~l~V~p~~rg~--------G--------------------iG~~Ll~~l~~~a~~~~~ 115 (247)
..+ ..... .....+++..++|++++|++ | +...|+..+.+++. .
T Consensus 94 ~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~---~ 170 (241)
T TIGR03694 94 HSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSS---A 170 (241)
T ss_pred cccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHH---H
Confidence 000 00111 34789999999999999974 2 55779999999998 9
Q ss_pred CCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 116 SSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 116 ~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.|++.+...+. ++..+++++.|+.....
T Consensus 171 ~Gi~~~~~v~~---~~l~r~l~r~G~~~~~l 198 (241)
T TIGR03694 171 NGITHWYAIME---PRLARLLSRFGIQFRQV 198 (241)
T ss_pred CCCcEEEEEeC---HHHHHHHHHhCCceEEc
Confidence 99999977664 46788999999876544
No 83
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=97.03 E-value=0.0099 Score=51.19 Aligned_cols=70 Identities=19% Similarity=0.300 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCcccceEEEEEEecCCCCCcc
Q psy16746 96 NGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYINGGHAAWS 175 (247)
Q Consensus 96 ~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d~~~m~~~l~~~~~~~~ 175 (247)
.|-...++..+.+.|. +.|+..|.+.|..+ +...|+++||..++..+.||. | .|++.|.++++..+...+
T Consensus 20 ~~~~~~~~~~~~~~a~---~~~~~ki~~~~~~~---~~~~~~~~g~~~e~~i~~~f~--g--~~~~~~~~~~~~~r~~~~ 89 (266)
T TIGR03827 20 GNDVEALIPDLDALAK---KEGYTKIIAKVPGS---DKPLFEERGYLEEAKIPGYFN--G--HDAYFMSKYLDEDRRISS 89 (266)
T ss_pred CccHHHHHHHHHHHHH---HcCCcEEEEEccHH---HHHHHHHCCCeEEEecccccC--C--CceEEEEEcCchHhCCCC
Confidence 3458899999999998 99999999988665 478999999999999999994 4 689999999987654433
No 84
>KOG3138|consensus
Probab=96.91 E-value=0.00023 Score=57.85 Aligned_cols=47 Identities=23% Similarity=0.225 Sum_probs=40.7
Q ss_pred cCCcchhhhhhhhhhccCCCCCCCcchhhhhccCCceeeeeeeecce
Q psy16746 197 KGIRNWLVCIKYLKCQDWFPIDYPLSWYKDITSEPSFYSLAALRNFF 243 (247)
Q Consensus 197 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (247)
....+=....++.+|+.+||+.|+|.||+|++++|.|.++|+..+..
T Consensus 20 ~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~~~~~~~A~~~~~~ 66 (187)
T KOG3138|consen 20 RLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSNGDLTQLAYYNEIA 66 (187)
T ss_pred ccCCcchHHHHHHHhccccCcchHHHHHHHHHhcCCHHHhhhhcccc
Confidence 44555566778889999999999999999999999999999988754
No 85
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=96.75 E-value=0.0022 Score=43.69 Aligned_cols=30 Identities=40% Similarity=0.401 Sum_probs=26.9
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHH
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHL 110 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a 110 (247)
..-|..|||+|.+|++||+++||+.+.+..
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 455888999999999999999999999874
No 86
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=96.65 E-value=0.021 Score=50.65 Aligned_cols=107 Identities=9% Similarity=0.088 Sum_probs=79.1
Q ss_pred CCchhHHHHhhcC--CCeEEEEEE-ECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHH
Q psy16746 23 NYPLSWYKDITSE--PSFYSLAAL-YNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIA 99 (247)
Q Consensus 23 ~~~~~~~~~~~~~--~~~~~~va~-~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG 99 (247)
.++.++++.+.+. +....+++. .+|++||.+.+.. ..+..+....+.++++++.+-+
T Consensus 178 ~~~~~~f~~l~~~~~~~~~l~~a~~~~g~~va~~l~~~--------------------~~~~~~~~~~g~~~~~~~~~~~ 237 (330)
T TIGR03019 178 VFSRRYFRLLKDVFGEDCEVLTVRLGDGVVASAVLSFY--------------------FRDEVLPYYAGGLREARDVAAN 237 (330)
T ss_pred CCCHHHHHHHHHhcccCEEEEEEEeCCCCEEEEEEEEE--------------------eCCEEEEEeccChHHHHhhChH
Confidence 4678888877644 344556677 6888887766543 1233333345678999999999
Q ss_pred HHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceec
Q psy16746 100 SLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYS 152 (247)
Q Consensus 100 ~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~ 152 (247)
..|+-+++++|. +.|++...+.....|.+..+|-++.||+.+...-.|+.
T Consensus 238 ~lL~w~~i~~a~---~~G~~~fDfG~s~~~~G~~~FK~~~G~~~~~l~~~~~~ 287 (330)
T TIGR03019 238 DLMYWELMRRAC---ERGLRVFDFGRSKRGTGPFKFKKNWGFEPQPLHYEYLL 287 (330)
T ss_pred HHHHHHHHHHHH---HCCCcEEEcCCCCCCCccHHHHhcCCCeeccceEEEEc
Confidence 999999999999 99999998876555667788888999998876655554
No 87
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=96.50 E-value=0.13 Score=39.74 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=70.8
Q ss_pred CCCChhhHHHHHHhhcCCC----------CCC-----C--chhHHHHhhcCCCeEEEEEE-ECCEEEEEEEEEeeecccc
Q psy16746 2 NSRSPDYQANVLTSTSLRH----------SGN-----Y--PLSWYKDITSEPSFYSLAAL-YNGVIIGLIVAEILQYTSL 63 (247)
Q Consensus 2 ~~~~~~d~~~i~~l~~~~f----------p~~-----~--~~~~~~~~~~~~~~~~~va~-~~~~iVG~~~~~~~~~~~~ 63 (247)
|.+++.|++.+.++..... |+. + +...++-+. -..++|++. .++.+.|++.+...+
T Consensus 4 R~f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~--RsgHSFvA~~e~~~~~GfvLAQaVW---- 77 (161)
T PF09390_consen 4 RPFTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYE--RSGHSFVAEDEGGELQGFVLAQAVW---- 77 (161)
T ss_dssp E---GGGHHHHHHC--------------------STTS---HHHHHHHH--CCS--EEEE-ETTEEEEEEEEEEEE----
T ss_pred cccCcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhh--ccCCcEEEEccCCceeeeeehhHHh----
Confidence 5678999999999854331 111 1 112232222 245678998 888999999998764
Q ss_pred CccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEE
Q psy16746 64 NKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143 (247)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~ 143 (247)
+++.....+..+.++|. +......-||.++++.+- +.|+-.+.+.+.+ ....--+..||..
T Consensus 78 ------------QGdrptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAY---Da~VYEv~l~l~p---~l~~A~~a~~~~~ 138 (161)
T PF09390_consen 78 ------------QGDRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAY---DAGVYEVHLHLDP---ELEAAARAEGFRL 138 (161)
T ss_dssp -------------SSSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHH---HTT-SEEEE---T---HHHHHHHHTT---
T ss_pred ------------cCCCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhh---ccceEEEEeeCCH---HHHHHHhhccccc
Confidence 45667888888877776 446778889999999998 9999999998877 5556677889987
Q ss_pred ee
Q psy16746 144 HS 145 (247)
Q Consensus 144 ~g 145 (247)
.+
T Consensus 139 ~~ 140 (161)
T PF09390_consen 139 GG 140 (161)
T ss_dssp -S
T ss_pred CC
Confidence 66
No 88
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.43 E-value=0.043 Score=45.21 Aligned_cols=139 Identities=12% Similarity=0.025 Sum_probs=93.3
Q ss_pred CCChhhHHHHHHhhcCCCCCC--Cc----hhHHHHhhcCCCeEEEEE-EECCEEEEEEEEEeeeccccCccc-hhhhh-c
Q psy16746 3 SRSPDYQANVLTSTSLRHSGN--YP----LSWYKDITSEPSFYSLAA-LYNGVIIGLIVAEILQYTSLNKED-KDILA-S 73 (247)
Q Consensus 3 ~~~~~d~~~i~~l~~~~fp~~--~~----~~~~~~~~~~~~~~~~va-~~~~~iVG~~~~~~~~~~~~~~~~-~~~~~-~ 73 (247)
...++-++++.++....|-+. |. ..+.-+...+.+-.++++ ..+|+|+|++-+-+-..+++...- ..++. .
T Consensus 11 ~~~~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~ 90 (209)
T COG3916 11 ELFPKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGG 90 (209)
T ss_pred hhcHHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCC
Confidence 345677778888877776432 21 122223333444555566 778999999988876655543332 22222 2
Q ss_pred ccCCCCcEEEEEEEEeCc--ccccCC----HHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 74 SFDKHIEVGYILSLGVSE--DYRRNG----IASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 74 ~~~~~~~~~~I~~l~V~p--~~rg~G----iG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
.....+.+++...++|++ .-++.| ++..|+..+++++. +.|++.|...+ .....+.+++.||..+..-
T Consensus 91 ~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~---~~G~~~IvtVt---~~~meril~r~Gw~~~riG 164 (209)
T COG3916 91 PPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYAL---ARGITGIVTVT---DTGMERILRRAGWPLTRIG 164 (209)
T ss_pred CCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHH---HcCCceEEEEE---chHHHHHHHHcCCCeEEcC
Confidence 234466889999999997 333333 47789999999999 99999996554 5588899999999987653
No 89
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.42 E-value=0.013 Score=54.01 Aligned_cols=120 Identities=17% Similarity=0.213 Sum_probs=90.8
Q ss_pred CChhhHHHHHHhhcCCCC-----CCCchhHHHHhhcCCCeEEEEEEEC-----CEEEEEEEEEeeeccccCccchhhhhc
Q psy16746 4 RSPDYQANVLTSTSLRHS-----GNYPLSWYKDITSEPSFYSLAALYN-----GVIIGLIVAEILQYTSLNKEDKDILAS 73 (247)
Q Consensus 4 ~~~~d~~~i~~l~~~~fp-----~~~~~~~~~~~~~~~~~~~~va~~~-----~~iVG~~~~~~~~~~~~~~~~~~~~~~ 73 (247)
.+..+.+.|..|.+..-. ..|.+.-.+++.++++...|.+... +-+||++++..
T Consensus 419 ~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~k---------------- 482 (574)
T COG3882 419 FDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEK---------------- 482 (574)
T ss_pred ccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEe----------------
Confidence 444556667666655432 2366666667767777776666543 45999999885
Q ss_pred ccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcC--CHHHHHHHHhCCCEEeee
Q psy16746 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTS--NKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 74 ~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~--N~~a~~fy~k~GF~~~g~ 146 (247)
..+.+.|..+.++=..=|+++-.+|+..+++.|. ..|+..+.....++ |.+-..||++.||+..+.
T Consensus 483 ----k~~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~---~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~e 550 (574)
T COG3882 483 ----KESEWFIDTFLMSCRVLGRKVEQRLMNSLEEQAL---SEGINTIRGYYIPTEKNAPVSDFYERMGFKLKGE 550 (574)
T ss_pred ----cCCeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCcceeeeEecccccCCcHHHHHHHhccccccc
Confidence 3367778888888888899999999999999999 99999998886654 888999999999996654
No 90
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=96.27 E-value=0.049 Score=40.91 Aligned_cols=52 Identities=19% Similarity=0.305 Sum_probs=41.8
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhC
Q psy16746 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139 (247)
Q Consensus 82 ~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~ 139 (247)
..|.++.|+++.|++|+|+.|.+.+.+. .++..-.+.+....+.-++|.+|.
T Consensus 47 ~cvLDFyVhes~QR~G~Gk~LF~~ML~~------e~~~p~~~a~DrPS~Kll~Fl~Kh 98 (120)
T PF05301_consen 47 LCVLDFYVHESRQRRGYGKRLFDHMLQE------ENVSPHQLAIDRPSPKLLSFLKKH 98 (120)
T ss_pred ceeeeEEEEeceeccCchHHHHHHHHHH------cCCCcccceecCCcHHHHHHHHHh
Confidence 4678899999999999999999999883 444455566777777888888774
No 91
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=96.11 E-value=0.038 Score=40.39 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=50.0
Q ss_pred EEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccE
Q psy16746 41 LAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKA 120 (247)
Q Consensus 41 ~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~ 120 (247)
+.+..++...|++++.... ......|+..++|.++.||+|+|..+.+.+.+. + ..
T Consensus 11 ~~~y~~e~y~~~aIvt~~~-----------------~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d-~-------~~ 65 (99)
T cd04264 11 HAIYLSEGYNAAAIVTYEG-----------------VNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD-F-------PK 65 (99)
T ss_pred eEEEEeCCceEEEEEeccC-----------------CCCCceEEEEEEEchhhhhcChHHHHHHHHHhh-C-------Cc
Confidence 4455556677777776431 124789999999999999999999999999875 3 56
Q ss_pred EEEEEEcCCHHH
Q psy16746 121 IFLHVLTSNKPA 132 (247)
Q Consensus 121 i~l~v~~~N~~a 132 (247)
+.-.++++|+.-
T Consensus 66 L~Wrsr~~n~~n 77 (99)
T cd04264 66 LFWRSRKTNPIN 77 (99)
T ss_pred eEEEeCCCCccc
Confidence 666777777643
No 92
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=95.92 E-value=0.0099 Score=54.36 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=63.8
Q ss_pred CCeEEEEEEE---CCEEEEEEEEEeeeccccCccchh--hhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHH
Q psy16746 36 PSFYSLAALY---NGVIIGLIVAEILQYTSLNKEDKD--ILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHL 110 (247)
Q Consensus 36 ~~~~~~va~~---~~~iVG~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a 110 (247)
.....|.... ++-++|++.+........+.+..+ .+-.-..-.+...-|+. . .-.+|.+|.|+.||+.+++.|
T Consensus 402 gg~e~Fls~ed~~~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~-~-~~~~QH~G~G~~L~~~AE~ia 479 (515)
T COG1243 402 GGTEIFLSYEDPKNDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGK-R-EDEWQHRGYGRELLEEAERIA 479 (515)
T ss_pred CCEEEEeecccchhhhhhheeeecccccchhhhhcccchhhhhhhhcccccccccc-C-cchhhcccHHHHHHHHHHHHH
Confidence 3344444433 356999999876543232222111 00000001122222444 3 578999999999999999999
Q ss_pred hhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 111 TTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 111 ~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
. +.+.++|.+- +-.++..+|+|+||+..|-
T Consensus 480 ~---ee~~~ki~vi---SgiG~ReYy~k~GY~~~gp 509 (515)
T COG1243 480 R---EEGAKKILVI---SGIGVREYYRKLGYELDGP 509 (515)
T ss_pred H---hhccccEEEE---ecccHHHHHHHhCccccCC
Confidence 8 7778887542 3568899999999997764
No 93
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=95.74 E-value=0.08 Score=46.99 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=63.5
Q ss_pred CCCCChhhHHHHHHhhcCCCCC----CCchhHHHHhh-----------c-CCCeEEEEEEE--CCEEEEEEEEEeeecc-
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG----NYPLSWYKDIT-----------S-EPSFYSLAALY--NGVIIGLIVAEILQYT- 61 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~----~~~~~~~~~~~-----------~-~~~~~~~va~~--~~~iVG~~~~~~~~~~- 61 (247)
||++.++|++++.+|-...-+. +-..+.+...+ . .+..+.||.++ .|+|||++.+...--.
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~ 81 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLE 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 6899999999999998766432 11122211111 1 14677888886 5899999988642210
Q ss_pred ----------------ccCcc-chhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHH
Q psy16746 62 ----------------SLNKE-DKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDN 105 (247)
Q Consensus 62 ----------------~~~~~-~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~ 105 (247)
.++.. ....+.. .........|.++.++|+||+.|.|+.|-..
T Consensus 82 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l-~nd~tG~SElctLfL~p~~R~~~~G~LLSr~ 141 (336)
T TIGR03244 82 EPFYNYRVGTVVHASKELGIYKALETLFL-SNDLTGYSELCTLFLDPDYRKGGNGRLLSKS 141 (336)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEe-eccCCCCeeeEEEEECHHHcCCcchhhHHHH
Confidence 00000 0000000 1223456779999999999999999887665
No 94
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=95.71 E-value=0.07 Score=47.30 Aligned_cols=105 Identities=11% Similarity=0.018 Sum_probs=63.7
Q ss_pred CCCCChhhHHHHHHhhcCCCCC----CCchhHHH--------Hh----h-cCCCeEEEEEEE--CCEEEEEEEEEeeecc
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG----NYPLSWYK--------DI----T-SEPSFYSLAALY--NGVIIGLIVAEILQYT 61 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~----~~~~~~~~--------~~----~-~~~~~~~~va~~--~~~iVG~~~~~~~~~~ 61 (247)
||++.++|++++.+|-...-+. +-..+.+. .+ . ..+..+.||.++ .|+|||++.+...--.
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 81 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGY 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccC
Confidence 6899999999999998766432 11111111 11 1 124677888886 5899999988643210
Q ss_pred -----------------ccCcc-chhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHH
Q psy16746 62 -----------------SLNKE-DKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNL 106 (247)
Q Consensus 62 -----------------~~~~~-~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l 106 (247)
.++.. ....+.. .........|.++.++|+||+.|.|+.|-..-
T Consensus 82 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l-~nd~tG~sElctLfL~p~~R~~~~G~lLSr~R 143 (336)
T TIGR03245 82 GEPFYSYRNDTLIHASRELKVNNKIHVLYM-CHELTGSSLLCSFYVDPRLRKTEAAELLSRAR 143 (336)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEe-eccCCCCeeeEEEEECHHHcCCCchhHHHHHH
Confidence 00000 0000000 12234567799999999999999998876653
No 95
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=95.61 E-value=0.056 Score=48.14 Aligned_cols=109 Identities=14% Similarity=0.120 Sum_probs=59.3
Q ss_pred CCCCChhhHHHHHHhhcCCCCC--CC--chhHHH--------Hh---h-cC--CCeEEEEEEE--CCEEEEEEEEEeeec
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG--NY--PLSWYK--------DI---T-SE--PSFYSLAALY--NGVIIGLIVAEILQY 60 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~--~~--~~~~~~--------~~---~-~~--~~~~~~va~~--~~~iVG~~~~~~~~~ 60 (247)
||+++++|++++.+|-...-+. .. ..+.+. .+ . .. +..+.||.++ .|+|||++.+...--
T Consensus 4 iRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a~vG 83 (342)
T PF04958_consen 4 IRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEAAVG 83 (342)
T ss_dssp EEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEESSTT
T ss_pred EecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEeccC
Confidence 5788999999999998766442 11 111111 11 1 11 4567888886 589999999864210
Q ss_pred -----------------cccCcc-chhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHH
Q psy16746 61 -----------------TSLNKE-DKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHL 110 (247)
Q Consensus 61 -----------------~~~~~~-~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a 110 (247)
..++.. ....+.. .........|.++.++|+||+.|.|+.|-..-.=.+
T Consensus 84 ~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L-~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFi 150 (342)
T PF04958_consen 84 LDEPFYSYRVSTLVHASRELGVRNRHETLTL-SNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFI 150 (342)
T ss_dssp SSS---EEEEEEEEEEETTTTEEEEEEEEEE-E-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCceeEcCcccCCccceeeEee-ecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHH
Confidence 001000 0001100 123456778999999999999999999887644333
No 96
>KOG2036|consensus
Probab=95.50 E-value=0.057 Score=51.94 Aligned_cols=90 Identities=16% Similarity=0.246 Sum_probs=62.4
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCC-------------ccEEE-------------------------
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSS-------------CKAIF------------------------- 122 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g-------------~~~i~------------------------- 122 (247)
-+.|..++|+|+|+++|+|++.++.+.++.. ..+ ++++.
T Consensus 614 GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~e---G~~~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L 690 (1011)
T KOG2036|consen 614 GARIVRIAVHPEYQKMGYGSRAVQLLTDYFE---GKFTSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKL 690 (1011)
T ss_pred CceEEEEEeccchhccCccHHHHHHHHHHHh---ccCCCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEc
Confidence 4678999999999999999999999999875 211 11110
Q ss_pred ----------EEE-EcCCHHHHHHHHhCCCEEeeeecceeccCCcccceEEEEEEecCCCCCcc
Q psy16746 123 ----------LHV-LTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYINGGHAAWS 175 (247)
Q Consensus 123 ----------l~v-~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d~~~m~~~l~~~~~~~~ 175 (247)
+.| .--.+.-.+||+|+||.++.....--..- .+...+|.+.+.+.+.+|-
T Consensus 691 ~er~perldylGvSfGLT~~L~kFWk~~gF~PvylrQt~n~lT--GEHtcimLk~L~~~e~~wl 752 (1011)
T KOG2036|consen 691 SERPPERLDYLGVSFGLTPSLLKFWKKNGFVPVYLRQTSNDLT--GEHTCIMLKTLEGDESGWL 752 (1011)
T ss_pred ccCCCcccceeeecccCCHHHHHHHHhcCceeEEeeccccccc--cceeEEEEecCCCcccchH
Confidence 000 01124557999999999887654333333 3667888888887777765
No 97
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=95.29 E-value=0.13 Score=45.64 Aligned_cols=105 Identities=15% Similarity=0.093 Sum_probs=63.8
Q ss_pred CCCCChhhHHHHHHhhcCCCCC----CCch------------hHHHHhhcCCCeEEEEEEE--CCEEEEEEEEEeeecc-
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG----NYPL------------SWYKDITSEPSFYSLAALY--NGVIIGLIVAEILQYT- 61 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~----~~~~------------~~~~~~~~~~~~~~~va~~--~~~iVG~~~~~~~~~~- 61 (247)
||++.++|++++.+|-...-+. +-.. ++..+....+..+.||.++ .|+|||++.+...--.
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 81 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLD 81 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 6899999999999998766432 1111 1111111125677788886 5899999988643210
Q ss_pred ----------------ccCcc-chhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHH
Q psy16746 62 ----------------SLNKE-DKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNL 106 (247)
Q Consensus 62 ----------------~~~~~-~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l 106 (247)
.++.. ....+.. .........|.++.++|+||+.|.|+.|-..-
T Consensus 82 ~PfY~yrv~~~vhaS~~L~v~~~~~~L~l-~nd~tG~sElctLfL~p~~R~~~~G~LLSr~R 142 (335)
T TIGR03243 82 EPFYNYRVGTLVHASRELGVYNKIPTLTL-SNDLTGSSELCTLFLDPDYRKGGNGRLLSRSR 142 (335)
T ss_pred CCCEEEEcCceeecCcccCCccceeeEEe-eccCCCCeeeEEEEECHHHcCCCchhhHHHHH
Confidence 00000 0000000 12234567799999999999999998887653
No 98
>PRK10456 arginine succinyltransferase; Provisional
Probab=95.26 E-value=0.1 Score=46.44 Aligned_cols=104 Identities=15% Similarity=0.119 Sum_probs=63.1
Q ss_pred CCCCChhhHHHHHHhhcCCCCC----CCchhHHHHhh-----------c-CCCeEEEEEEE--CCEEEEEEEEEeeecc-
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG----NYPLSWYKDIT-----------S-EPSFYSLAALY--NGVIIGLIVAEILQYT- 61 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~----~~~~~~~~~~~-----------~-~~~~~~~va~~--~~~iVG~~~~~~~~~~- 61 (247)
||++.++|++++.+|-...-+. +-..+.+...+ . .+..+.||.++ .|+|||++.+...--.
T Consensus 4 vRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 83 (344)
T PRK10456 4 IRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLN 83 (344)
T ss_pred EecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEecccCC
Confidence 5889999999999998766532 11122111111 1 24567888886 5899999988642210
Q ss_pred ----------------ccCcc-chhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHH
Q psy16746 62 ----------------SLNKE-DKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDN 105 (247)
Q Consensus 62 ----------------~~~~~-~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~ 105 (247)
.++.. ....+.. .........|.++.++|+||+.|.|+.|-..
T Consensus 84 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l-~nd~tG~sElctLfl~p~~R~~~~G~LLSr~ 143 (344)
T PRK10456 84 DPWYNYRVGTLVHASKELNVYNALPTLFL-SNDHTGSSELCTLFLDPDWRKEGNGYLLSKS 143 (344)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEe-eccCCCCceeEEEEECHHHcCCCchhHHHHH
Confidence 00000 0000100 1223456778999999999999999887665
No 99
>PRK14852 hypothetical protein; Provisional
Probab=95.15 E-value=0.08 Score=53.22 Aligned_cols=155 Identities=12% Similarity=0.059 Sum_probs=104.0
Q ss_pred CChhhHHHHHHhhcCCCCC-CCc----hhH-HHHhhcCCCeEEEEEEECCEEEEEEEEEeeecc-ccCcc--chhhhhcc
Q psy16746 4 RSPDYQANVLTSTSLRHSG-NYP----LSW-YKDITSEPSFYSLAALYNGVIIGLIVAEILQYT-SLNKE--DKDILASS 74 (247)
Q Consensus 4 ~~~~d~~~i~~l~~~~fp~-~~~----~~~-~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~-~~~~~--~~~~~~~~ 74 (247)
-+++++.++..|....|-. .|. ... +..+-..++...|++...+.++|..++...... .++.. ....++..
T Consensus 35 et~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~D~lf~~eLd~l 114 (989)
T PRK14852 35 ETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLPMDTLYKPEVDAL 114 (989)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcCHHHHHHHHHHHH
Confidence 4678888888887655421 122 211 222223366667888777888888877655432 33322 22223334
Q ss_pred cCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHh-CCCEEeeeecceecc
Q psy16746 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK-RRFRLHSFLPYYYSI 153 (247)
Q Consensus 75 ~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k-~GF~~~g~~~~~~~~ 153 (247)
.......+.+..++++++.|..-+--.+++.+..++. ..+++.+.+.|+|. =..||++ +||+..+..+.|-..
T Consensus 115 r~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~---~~~~dd~~i~VnPk---H~~FY~r~l~f~~ig~~r~~p~V 188 (989)
T PRK14852 115 RAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSM---MSEVDDILVTVNPK---HVKFYTDIFLFKPFGEVRHYDTV 188 (989)
T ss_pred HHcCCeEEeeehheechhhcccchhHHHHHHHHHHHH---HcCCCeEEEEECcc---hHHHHHHHhCCccccccccCCCC
Confidence 4456689999999999988887777888888888887 77999998888554 4679997 699999987655444
Q ss_pred CCcccceEEEEEEe
Q psy16746 154 KGRSRDGFTYVLYI 167 (247)
Q Consensus 154 ~g~~~d~~~m~~~l 167 (247)
+ .-++.|...+
T Consensus 189 n---aPAvll~~dl 199 (989)
T PRK14852 189 D---APAVALRIDL 199 (989)
T ss_pred C---cchhheecCH
Confidence 4 3466777666
No 100
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=94.89 E-value=0.065 Score=42.79 Aligned_cols=152 Identities=14% Similarity=0.088 Sum_probs=95.1
Q ss_pred CCChhhHHHHHHhhcCCCCCC--CchhHHH---HhhcC-CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 3 SRSPDYQANVLTSTSLRHSGN--YPLSWYK---DITSE-PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 3 ~~~~~d~~~i~~l~~~~fp~~--~~~~~~~---~~~~~-~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
..+.+|..++.++.+..|... +...-++ .+... |+.. .++++...+++.+.+..+ +.....
T Consensus 14 eL~l~dH~eLa~ffrktYgptg~fnakpFeg~RSWAGARPElR-aIgyD~~GvaAH~G~LRR------------FIkVG~ 80 (196)
T PF02474_consen 14 ELQLADHVELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELR-AIGYDSRGVAAHMGLLRR------------FIKVGE 80 (196)
T ss_pred ccchhhhHHHHHHHHHhcCCCCcccCccCCcccccccCCceeE-EEeecCchHHHHHHHHHH------------HhccCC
Confidence 456778888888888887632 3221111 12211 2222 344454445544433211 000112
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhC---CC-------EEeee
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR---RF-------RLHSF 146 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~---GF-------~~~g~ 146 (247)
.+.-+++++-++|.|+.+|.||+..+ ..+...++ ++|+..-..+|+. +..+.++++ |. ++..+
T Consensus 81 vDlLVaElGLygVRpDLEGlGi~hs~-r~m~PvLq---~LgVPF~FGtVR~---al~~Hv~R~~R~gl~ti~~gvrVRST 153 (196)
T PF02474_consen 81 VDLLVAELGLYGVRPDLEGLGISHSM-RVMYPVLQ---ELGVPFGFGTVRH---ALRNHVERLCRNGLATILSGVRVRST 153 (196)
T ss_pred cceeEEEEEEEEeeccccccccchhh-hhhhhHHH---hcCCCeecccchH---HHHHHHHHHhccchhhcccCceeecc
Confidence 24458899999999999999999976 68888887 9999999888865 555666655 44 55566
Q ss_pred ecceecc--CCcccceEEEEEEecCCCCCc
Q psy16746 147 LPYYYSI--KGRSRDGFTYVLYINGGHAAW 174 (247)
Q Consensus 147 ~~~~~~~--~g~~~d~~~m~~~l~~~~~~~ 174 (247)
+++-+.. ...-+|++.+++++...-+.|
T Consensus 154 lpdv~~dlppTr~ed~lv~V~Pi~r~~seW 183 (196)
T PF02474_consen 154 LPDVYLDLPPTRIEDVLVVVLPIGRSMSEW 183 (196)
T ss_pred CccccCCCCCcccccceEEEEcCCCccccC
Confidence 6666653 345689999999887554333
No 101
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.87 E-value=0.14 Score=37.34 Aligned_cols=46 Identities=20% Similarity=0.243 Sum_probs=37.7
Q ss_pred CcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHH
Q psy16746 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPA 132 (247)
Q Consensus 79 ~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a 132 (247)
+.+.|+..++|.++.||+|+|..+++++.+.. ..+.-.++++|+.-
T Consensus 32 ~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~--------~~L~Wrsr~~n~~n 77 (99)
T cd04265 32 DGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF--------PKLFWRSRSTNPIN 77 (99)
T ss_pred CCceEEEEEEEchhhhhcChHHHHHHHHHhhC--------CceEEEeCCCCccc
Confidence 46899999999999999999999999998753 34666677777543
No 102
>KOG2779|consensus
Probab=94.53 E-value=0.21 Score=44.29 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=74.7
Q ss_pred hhHHHHHHhhcCCC--------CCCCchhHHHHhhcCCC---eEEEEE--EECCEEEEEEEEEeeeccccCccchhhhhc
Q psy16746 7 DYQANVLTSTSLRH--------SGNYPLSWYKDITSEPS---FYSLAA--LYNGVIIGLIVAEILQYTSLNKEDKDILAS 73 (247)
Q Consensus 7 ~d~~~i~~l~~~~f--------p~~~~~~~~~~~~~~~~---~~~~va--~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~ 73 (247)
.|++++..|...-+ -..|..+++...+..++ .++... ...+++|||+.+.+..-.
T Consensus 92 ~~l~el~~lL~enyVEd~~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv~~s~kLVaFIsaiP~~ir------------ 159 (421)
T KOG2779|consen 92 KDLEELYNLLNENYVEDDDSMFRFDYSPEFLKWALQPPGWKKEWHIGVRVKSSKKLVAFISAIPATIR------------ 159 (421)
T ss_pred hHHHHHHhhcccCCCCccccchhhhccHHHHHhhhcCCCCccceEEEEEEecCCceEEEEeccccEEE------------
Confidence 44555555444333 23477788888887732 233333 334699999988643211
Q ss_pred ccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEE---EEEEcCCHHHHHHHHh
Q psy16746 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIF---LHVLTSNKPAIHFYEK 138 (247)
Q Consensus 74 ~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~---l~v~~~N~~a~~fy~k 138 (247)
.....-..+.|..+|||...|+++++.-|+.++...+. -.|+-+-. -.+.+.+...-+.|.|
T Consensus 160 vrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvn---l~gIfqA~yTaGvvLp~PVstcRY~HR 224 (421)
T KOG2779|consen 160 VRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVN---LEGIFQAAYTAGVVLPKPVSTCRYWHR 224 (421)
T ss_pred EccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhh---hhhhhhHhhhcceeeccccchhhhhhc
Confidence 01233458899999999999999999999999999886 55543321 1256666555566654
No 103
>KOG2535|consensus
Probab=93.91 E-value=0.069 Score=47.31 Aligned_cols=50 Identities=16% Similarity=0.299 Sum_probs=41.7
Q ss_pred ccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 92 DYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 92 ~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.||.||.|+.||++++..|+ ++.|-..|.+-. ..+..++|+|+||+..|-
T Consensus 498 KfQHQG~GtLLmeEAERIAr--~EHgS~KiavIS---GVGtR~YY~klGY~LdGP 547 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAR--EEHGSGKIAVIS---GVGTRNYYRKLGYELDGP 547 (554)
T ss_pred hhhhcchhhHHHHHHHHHHH--HhcCCCceEEEe---ccchHHHHHhhCeeecCh
Confidence 58999999999999999999 778888875532 346678999999998764
No 104
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=93.69 E-value=1.5 Score=33.62 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=56.6
Q ss_pred hhHHHHhhcC--CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHH
Q psy16746 26 LSWYKDITSE--PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLL 103 (247)
Q Consensus 26 ~~~~~~~~~~--~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll 103 (247)
...+..++.. .....+-...+|++||+.++..-+ .....|. ..-||++..+.+|+-.+
T Consensus 25 ~~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~-------------------~glSaVY-~fyDPd~~~~SlG~~~i 84 (128)
T PF04377_consen 25 QEQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILP-------------------DGLSAVY-TFYDPDYSKRSLGTYSI 84 (128)
T ss_pred HHHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeeccc-------------------chhhhee-eeeCCCccccCcHHHHH
Confidence 3444555543 334445566899999999887532 1222233 44599999999999999
Q ss_pred HHHHHHHhhhccCCccEEEEEEEc
Q psy16746 104 DNLISHLTTAENSSCKAIFLHVLT 127 (247)
Q Consensus 104 ~~l~~~a~~~~~~g~~~i~l~v~~ 127 (247)
-.-++.|+ +.|.+.++|.-.-
T Consensus 85 L~eI~~a~---~~~l~y~YLGY~I 105 (128)
T PF04377_consen 85 LREIELAR---ELGLPYYYLGYWI 105 (128)
T ss_pred HHHHHHHH---HcCCCEEeeCeEe
Confidence 99999999 9999999985433
No 105
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=93.25 E-value=0.31 Score=35.48 Aligned_cols=68 Identities=19% Similarity=0.158 Sum_probs=41.2
Q ss_pred CCeEEEEEEECCE-EEEEEEEEeeeccc-cC-ccchhh--hhcccCCCCcEEEEEEEEeCcccccCCHHHHHH
Q psy16746 36 PSFYSLAALYNGV-IIGLIVAEILQYTS-LN-KEDKDI--LASSFDKHIEVGYILSLGVSEDYRRNGIASLLL 103 (247)
Q Consensus 36 ~~~~~~va~~~~~-iVG~~~~~~~~~~~-~~-~~~~~~--~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll 103 (247)
+....+++..++. +||++-+....... +. -..... +........+.++|..++|+|+||+......|.
T Consensus 28 ~~~~h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 28 EHSVHLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CCccEEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 3455566656555 99999887654332 00 001111 111122335899999999999999987776664
No 106
>PRK00756 acyltransferase NodA; Provisional
Probab=92.71 E-value=0.67 Score=36.88 Aligned_cols=148 Identities=16% Similarity=0.084 Sum_probs=87.7
Q ss_pred CCChhhHHHHHHhhcCCCCCC--CchhHHH---HhhcC-CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 3 SRSPDYQANVLTSTSLRHSGN--YPLSWYK---DITSE-PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 3 ~~~~~d~~~i~~l~~~~fp~~--~~~~~~~---~~~~~-~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
..+..|..++.++.+..|... +...-++ .+... ++.. .++++..-+++.+.+..+ +.....
T Consensus 14 eL~ladH~eLaeFfr~tYgptGafnakpFeG~RSWAGARPElR-aIgyD~~GVaAH~G~LRR------------FIkVg~ 80 (196)
T PRK00756 14 ELELSDHAELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELR-AIAYDSHGVAAHMGLLRR------------FIKVGE 80 (196)
T ss_pred ccccchhHHHHHHHHHhcCCcccccccccCcCcccccCCceeE-EEeecCccHhHhHHHHhh------------hheecc
Confidence 355677788888777777531 2221111 11111 2222 344444445544433211 000012
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHh---C-------CCEEeee
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK---R-------RFRLHSF 146 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k---~-------GF~~~g~ 146 (247)
-+.-+++++-++|.|+..|.||+..+ ..+...++ ++|+..-.-+|+. +..+-.++ . |-++..+
T Consensus 81 vDlLVaElGLygVRpDLEGlGi~~S~-r~m~PvLq---~LgVPF~FGtVR~---al~~Hv~R~~r~g~~ti~~gvrVRST 153 (196)
T PRK00756 81 VDLLVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQ---ELGVPFAFGTVRH---ALRNHVERLCRNGLATIVTGVRVRST 153 (196)
T ss_pred cceeEEEeeeeeeccccccccchhhH-HHHHHHHH---hcCCCeecccchH---HHHHHHHHHhccCcceecccceeecc
Confidence 24458889999999999999999877 67788887 9999988877765 44444444 3 3445556
Q ss_pred ecceecc--CCcccceEEEEEEecCC
Q psy16746 147 LPYYYSI--KGRSRDGFTYVLYINGG 170 (247)
Q Consensus 147 ~~~~~~~--~g~~~d~~~m~~~l~~~ 170 (247)
+++-+.. ...-+|.+.+++++...
T Consensus 154 l~~v~~dlpptr~ed~lv~V~Pi~r~ 179 (196)
T PRK00756 154 LPDVYLDLPPTRTEDVLVVVFPIGRP 179 (196)
T ss_pred CccccCCCCCccccccEEEEEeCCCc
Confidence 6655542 45578888888888644
No 107
>PHA00432 internal virion protein A
Probab=92.64 E-value=2 Score=33.17 Aligned_cols=83 Identities=14% Similarity=0.110 Sum_probs=51.9
Q ss_pred CeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcc---cccCCHHHHHHHHHHHHHhhh
Q psy16746 37 SFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSED---YRRNGIASLLLDNLISHLTTA 113 (247)
Q Consensus 37 ~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~---~rg~GiG~~Ll~~l~~~a~~~ 113 (247)
+..++....+|.+++... +....++.+.+-.|..- +|+ =..+++....+.+.
T Consensus 36 s~~~~~~~~~G~~~aI~G---------------------n~G~~vW~v~T~~v~~~~~~~~r--eF~k~~~~~ld~ml-- 90 (137)
T PHA00432 36 DSECVTLSLDGFVLAIGG---------------------NQGDQVWFVTSDQVWRLTKKEKR--EFRKLIMEYRDMML-- 90 (137)
T ss_pred CceEEEEecCCeEEEEec---------------------CCCCceEEEecHHhhhCChhhhH--HHHHHHHHHHHHHH--
Confidence 445778888999988773 12334455555555441 221 23333333334332
Q ss_pred ccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 114 ENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 114 ~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.....+.=.|...|..+++|.+.+||+.+..
T Consensus 91 --~~yp~LwNyV~~~N~~hir~Lk~lGf~f~~e 121 (137)
T PHA00432 91 --DQYPSLWNYVWVGNKSHIRFLKSIGAVFHNE 121 (137)
T ss_pred --HhhhhhheeeecCCHHHHHHHHHcCeeeecc
Confidence 2256666679999999999999999998765
No 108
>KOG4601|consensus
Probab=92.39 E-value=0.79 Score=38.39 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=62.7
Q ss_pred CchhHHHHhhcCCCeEEEEEEEC-----CEEEEEEEEEeeeccccCccchhhhhccc-CCCCcEEEEEEEEeCcccccCC
Q psy16746 24 YPLSWYKDITSEPSFYSLAALYN-----GVIIGLIVAEILQYTSLNKEDKDILASSF-DKHIEVGYILSLGVSEDYRRNG 97 (247)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~va~~~-----~~iVG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~I~~l~V~p~~rg~G 97 (247)
-+....+.+..+.+...+...++ +.|.|++-+.... + -+.+... ........|..++|+++-|++|
T Consensus 53 ~piTsadKl~~sd~~vvy~~kd~~a~~ks~l~GllKVG~Kk---L-----fl~D~~~~~ye~e~lcILDFyVheS~QR~G 124 (264)
T KOG4601|consen 53 RPITSADKLVDSDEEVVYYIKDEKANGKSILKGLLKVGYKK---L-----FLTDNEQNQYEEEALCILDFYVHESEQRSG 124 (264)
T ss_pred cccchHHHhhcCcceEEEEEeecccCcchheeeeehcccee---E-----EEeccHhhhhccCCceEEEEEeehhhhhcC
Confidence 34555666664444443433332 3588888765332 0 0001110 1134567799999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhC-CCE
Q psy16746 98 IASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR-RFR 142 (247)
Q Consensus 98 iG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~-GF~ 142 (247)
.|..|++.+.+ +.+...=.|.+.......+.|.+|. |-.
T Consensus 125 ~G~~lfdyMl~------kE~vephQ~a~DrPS~kLl~Fm~khYgl~ 164 (264)
T KOG4601|consen 125 NGFKLFDYMLK------KENVEPHQCAFDRPSAKLLQFMEKHYGLK 164 (264)
T ss_pred chHHHHHHHHH------hcCCCchheeccChHHHHHHHHHHhcCcc
Confidence 99999998887 3444444444555556677887764 443
No 109
>PHA01733 hypothetical protein
Probab=92.04 E-value=0.48 Score=37.22 Aligned_cols=89 Identities=13% Similarity=0.014 Sum_probs=52.6
Q ss_pred CeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccC
Q psy16746 37 SFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENS 116 (247)
Q Consensus 37 ~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~ 116 (247)
.........+|+++|....... ..++++.+-.++.+.=.+ +-+.++.+...... +..
T Consensus 46 ~~~v~~~~~nG~l~aI~Gv~~d------------------~~~~vG~pWlV~T~~v~k---~~~~f~re~r~~l~--e~~ 102 (153)
T PHA01733 46 ENVVAFVAPDGSLAGVAGLVED------------------MGNRVGEIWMVCTPAIEK---NPIALLRGAKWWLP--KSR 102 (153)
T ss_pred ccceEEEecCCcEEEEeccccc------------------ccCCCCceeEEecHHhHh---CCHHHHHHHHHHHH--Hhc
Confidence 3333455567889888876631 112233222222222111 44566666666665 223
Q ss_pred CccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 117 SCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 117 g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
.+..+.=.|...|..+++|.+.+||+.+...+
T Consensus 103 ~Yp~LwNyV~~~N~~hir~Lk~lGF~f~~~~~ 134 (153)
T PHA01733 103 NYDLLWNIVDKRNLVHRKLLRKLGFKGLRYVQ 134 (153)
T ss_pred cccHHHHhHhcccHHHHHHHHHcCceeecccc
Confidence 44445555899999999999999999876544
No 110
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=91.86 E-value=1.1 Score=39.03 Aligned_cols=101 Identities=14% Similarity=0.121 Sum_probs=60.9
Q ss_pred ChhhHHHHHHhhcCCCCCC--CchhHHHHhhcC---CCeEEEEEEE-CCEEEEEEEEEeeeccccCccchhhhhcccCCC
Q psy16746 5 SPDYQANVLTSTSLRHSGN--YPLSWYKDITSE---PSFYSLAALY-NGVIIGLIVAEILQYTSLNKEDKDILASSFDKH 78 (247)
Q Consensus 5 ~~~d~~~i~~l~~~~fp~~--~~~~~~~~~~~~---~~~~~~va~~-~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (247)
++++.+++.++...|.... -...+....+.. .+...+++.. +|+++|++...+.. .
T Consensus 142 ~~~~~~el~~i~~~W~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~dgki~af~~~~~~~------------------~ 203 (299)
T PF09924_consen 142 DPELRDELLEISDEWLKEKERPERGFIMGALEHFDELGLRGFVARVADGKIVAFAIGSPLG------------------G 203 (299)
T ss_dssp -GGGHHHHHHHHHHHHHHCTHHHHHHHHHHHHTHHHHT-EEEEEEE-TTEEEEEEEEEEEE-------------------
T ss_pred CHHHHHHHHHHHHHHHhcCchhHHHHHhccccchhhcCceEEEEEECCCcEEEEEEEEEcc------------------C
Confidence 6888999999988876543 111222222222 4567788888 99999999999752 1
Q ss_pred CcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEc
Q psy16746 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT 127 (247)
Q Consensus 79 ~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~ 127 (247)
.+...++-.--+++ .-+|+-..|+.+++++++ +.|++.+.|...|
T Consensus 204 ~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~---~~g~~~lnLg~ap 248 (299)
T PF09924_consen 204 RDGWSIDFEKADPD-APKGIYEFLNVEFAEHLK---AEGVEYLNLGFAP 248 (299)
T ss_dssp TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS-----TT--EEE-----
T ss_pred CccEEEEEEecCCC-CCCcHHHHHHHHHHHhhh---hCCceEEEccccc
Confidence 23444443334554 457899999999999998 8999999765433
No 111
>KOG3014|consensus
Probab=91.81 E-value=0.67 Score=39.25 Aligned_cols=70 Identities=27% Similarity=0.198 Sum_probs=43.4
Q ss_pred EEEECCEEEEEEEEEeeeccccCccchh---------hhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHh
Q psy16746 42 AALYNGVIIGLIVAEILQYTSLNKEDKD---------ILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLT 111 (247)
Q Consensus 42 va~~~~~iVG~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~ 111 (247)
.+-.+..+||++++.+........+... ......-..+-.+-|..++|.+..|++||++.|++.+...-.
T Consensus 135 FIS~rk~~VGcLvaE~Is~a~~~i~~~~~~~~~~s~~~~~~s~~~~~~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 135 FISVRKIVVGCLVAEPISQAFRVIESPGVTDSYDSQKAWQNSPLPEPAICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred EEEecceeeeEEEehhhhhhhhhccCcCcccchhhHHHhccCCCCCCcEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 3334444899888766543321111111 110111123456779999999999999999999999887653
No 112
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=91.53 E-value=1.9 Score=34.67 Aligned_cols=109 Identities=12% Similarity=0.129 Sum_probs=67.3
Q ss_pred hHHHHHHhhcCCCCCC-CchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEE
Q psy16746 8 YQANVLTSTSLRHSGN-YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS 86 (247)
Q Consensus 8 d~~~i~~l~~~~fp~~-~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~ 86 (247)
|.+.+.++....|... ....+++++ +..... +..++..-|.+++..... ...+...|+..
T Consensus 33 d~~kL~~ll~~sf~~~~~v~~yl~~l-~~~~~~---iy~d~~y~~~AIVt~e~~---------------~~~~~v~yLdK 93 (170)
T PF04768_consen 33 DLDKLRALLERSFGGKLDVDHYLDRL-NNRLFK---IYVDEDYEGAAIVTPEGP---------------DSNGPVPYLDK 93 (170)
T ss_dssp -HHHHHHHHHHHSTSSSBHTTHHHHH-HTS-SE---EEEETTSSEEEEEEEE-S---------------CTCTSEEEEEE
T ss_pred CHHHHHHHHHhcccccccHHHHHHHh-hccceE---EEEeCCceEEEEEEecCC---------------CCCCCCeEEEE
Confidence 7888888888888433 334555554 332232 222333445555544221 13457999999
Q ss_pred EEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhC-CCEE
Q psy16746 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR-RFRL 143 (247)
Q Consensus 87 l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~-GF~~ 143 (247)
++|.+..||.|++-.+..++.+... .+.-.++++|+.-.=+++|. |+-.
T Consensus 94 Fav~~~~~g~gv~D~vf~~i~~d~p--------~L~Wrsr~~n~~~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 94 FAVSKSAQGSGVADNVFNAIRKDFP--------KLFWRSREDNPNNKWYFERSDGSFK 143 (170)
T ss_dssp EEE-HHHHHTTHHHHHHHHHHHH-S--------SEEEEEETT-TTHHHHHHH-SEEEE
T ss_pred EEecchhhhcCHHHHHHHHHHHhcc--------ceEEEecCCCCcccEEEEeeEEEEE
Confidence 9999999999999999999977543 36667888886655555554 6554
No 113
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=91.52 E-value=4.7 Score=34.29 Aligned_cols=81 Identities=9% Similarity=0.085 Sum_probs=58.0
Q ss_pred hhHHHHhhcC--CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHH
Q psy16746 26 LSWYKDITSE--PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLL 103 (247)
Q Consensus 26 ~~~~~~~~~~--~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll 103 (247)
...+..++.. .....+-...+|++||++++..- ......|. ..-||++..+++|+-.+
T Consensus 130 ~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l-------------------~d~lSAVY-~FyDPd~~~~SLG~~~i 189 (240)
T PRK01305 130 RDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVL-------------------DDGLSAVY-TFYDPDEEHRSLGTFAI 189 (240)
T ss_pred HHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEecc-------------------CCceeeEE-EeeCCCccccCCHHHHH
Confidence 3445555544 22333444578999999998753 22233343 56699999999999999
Q ss_pred HHHHHHHhhhccCCccEEEEEEEcCC
Q psy16746 104 DNLISHLTTAENSSCKAIFLHVLTSN 129 (247)
Q Consensus 104 ~~l~~~a~~~~~~g~~~i~l~v~~~N 129 (247)
-.-+++|+ +.|.+.++|.-.-.+
T Consensus 190 L~qI~~ak---~~gl~y~YLGY~I~~ 212 (240)
T PRK01305 190 LWQIELAK---RLGLPYVYLGYWIKG 212 (240)
T ss_pred HHHHHHHH---HcCCCeEeeeEEECC
Confidence 99999999 999999999765544
No 114
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=90.39 E-value=1.1 Score=38.73 Aligned_cols=103 Identities=14% Similarity=0.127 Sum_probs=59.4
Q ss_pred CCCCChhhHHHHHHhhcCCCCC----CCchh------------HHHHhhcCCCeEEEEEEE--CCEEEEEEEEEeee---
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSG----NYPLS------------WYKDITSEPSFYSLAALY--NGVIIGLIVAEILQ--- 59 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~----~~~~~------------~~~~~~~~~~~~~~va~~--~~~iVG~~~~~~~~--- 59 (247)
+|+++..|++++.++-...-.. +-.+. |.......+..+.||.++ .|+++|...+...-
T Consensus 4 vRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~vGl~ 83 (336)
T COG3138 4 VRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAVGLN 83 (336)
T ss_pred cccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEeeccC
Confidence 5788889999999987654321 11111 222111125677888888 68999998875421
Q ss_pred --------------ccccCcc-chhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHH
Q psy16746 60 --------------YTSLNKE-DKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLD 104 (247)
Q Consensus 60 --------------~~~~~~~-~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~ 104 (247)
++.++.. ..+.+ ...+.......+.++.++|++|.-|-|+.|-+
T Consensus 84 ~PfYsyRv~tlvhaS~~L~v~~~i~~L-~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr 142 (336)
T COG3138 84 DPFYSYRVGTLVHASPELNVYNEIPTL-FLSNDLTGNSELCTLFLDPDWRKGGNGRLLSK 142 (336)
T ss_pred CccceeeeeeeeecCccccccccceeE-EEeccCcCchhhhheeecHHHhcccchhhhhh
Confidence 0111111 00000 00122344566888999999998887776543
No 115
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=88.67 E-value=4.1 Score=33.24 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=24.8
Q ss_pred EEEEEEeCcccccCCHHHHHHHHHHHHHh
Q psy16746 83 YILSLGVSEDYRRNGIASLLLDNLISHLT 111 (247)
Q Consensus 83 ~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~ 111 (247)
-+.-|.|-|.||++|+|+.|++..-+.++
T Consensus 82 NLsCIl~lP~yQrkGyG~~LI~fSY~LSr 110 (188)
T PF01853_consen 82 NLSCILTLPPYQRKGYGRFLIDFSYELSR 110 (188)
T ss_dssp EESEEEE-GGGTTSSHHHHHHHHHHHHHH
T ss_pred eEeehhhcchhhhcchhhhhhhhHHHHhh
Confidence 34558899999999999999999999887
No 116
>KOG3698|consensus
Probab=87.07 E-value=1.1 Score=42.32 Aligned_cols=57 Identities=14% Similarity=0.160 Sum_probs=49.4
Q ss_pred EeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 88 ~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
.++.+.-.-|+.+++++.+...++ ..|...-.+.|..+..+-.+||.++||...+..
T Consensus 823 ~~~~~a~D~~~~k~m~~vll~tL~---aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~~~ 879 (891)
T KOG3698|consen 823 YFGMDASDAHPMKKMIQVLLVTLA---ANGSRGAFLTVAIDDIERQKFYSELGLTDLGLS 879 (891)
T ss_pred ccccccccchHHHHHHHHHHHHHH---hcCCcceeEEechhHHHHHHHHHHhchHHHhHh
Confidence 344455578999999999999998 899999999999999999999999999977653
No 117
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=86.84 E-value=1.4 Score=38.61 Aligned_cols=98 Identities=11% Similarity=0.143 Sum_probs=65.6
Q ss_pred hhHHHHHHhhcCCCCC--------CCchhHHHHhhcCCC---eEEEEEEECC--EEEEEEEEEeeeccccCccchhhhhc
Q psy16746 7 DYQANVLTSTSLRHSG--------NYPLSWYKDITSEPS---FYSLAALYNG--VIIGLIVAEILQYTSLNKEDKDILAS 73 (247)
Q Consensus 7 ~d~~~i~~l~~~~fp~--------~~~~~~~~~~~~~~~---~~~~va~~~~--~iVG~~~~~~~~~~~~~~~~~~~~~~ 73 (247)
.+++++..+...-+-+ .|..+++...+..+. .++++....+ ++||++.+.+..-.
T Consensus 90 ~ql~dv~~lL~eNYVED~~ag~rf~Y~~EFl~Wal~~pg~kK~whigvRvk~t~klVaFIsa~p~~v~------------ 157 (451)
T COG5092 90 KQLEDVFVLLEENYVEDIYAGHRFRYSVEFLQWALDGPGGKKRWHIGVRVKGTQKLVAFISAKPHLVS------------ 157 (451)
T ss_pred chhHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhcCCCCceeeEEEEEEcccceeEEEEecceeEEE------------
Confidence 4455555554443322 256678887777633 3455555554 89999987643210
Q ss_pred ccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCcc
Q psy16746 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCK 119 (247)
Q Consensus 74 ~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~ 119 (247)
.-.....++.+..+||+.+.|++.+...|+.++...+. .-|+-
T Consensus 158 vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n---~~~iw 200 (451)
T COG5092 158 VRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRAN---VDGIW 200 (451)
T ss_pred EcccccccceEEEEEEehhhhhCccchHHHHHHHHhhh---hhhhH
Confidence 11234458889999999999999999999999999886 54543
No 118
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=85.99 E-value=0.25 Score=45.30 Aligned_cols=61 Identities=18% Similarity=0.276 Sum_probs=43.5
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEE-----EEcCCHHHHHHHHhCCCEE
Q psy16746 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLH-----VLTSNKPAIHFYEKRRFRL 143 (247)
Q Consensus 80 ~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~-----v~~~N~~a~~fy~k~GF~~ 143 (247)
..+.|..+.|||+||+-|+|.+.+..+.++.. +.-+..+.-. +...-..-..|+++.||..
T Consensus 240 aaariarvvvhpdyr~dglg~~sv~~a~ewI~---eRriPEmr~rkHlvetiaqmarynpffe~~gfky 305 (593)
T COG2401 240 AAARIARVVVHPDYRADGLGQLSVIAALEWII---ERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKY 305 (593)
T ss_pred hhhheeEEEeccccccCccchhHHHHHHHHHH---HhhChhhhhhhhHHHHHHHHHhcCchhhhhceee
Confidence 34678999999999999999999999999998 6655544221 0000111235888889884
No 119
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=85.16 E-value=3.6 Score=37.12 Aligned_cols=86 Identities=12% Similarity=0.148 Sum_probs=60.6
Q ss_pred hhHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEE
Q psy16746 7 DYQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS 86 (247)
Q Consensus 7 ~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~ 86 (247)
-|++.+..+.+..|.......+++..+..+-...+|+ |.--|.+++.... ....++.|+..
T Consensus 345 Ldl~r~q~LI~~SFkRTLd~h~y~~r~~~~La~~iVs---gdY~g~aIlTyeg----------------s~~~~vpYLDK 405 (495)
T COG5630 345 LDLPRLQHLIQSSFKRTLDPHYYETRINTPLARAIVS---GDYRGAAILTYEG----------------SGENNVPYLDK 405 (495)
T ss_pred cCcHHHHHHHHHHHhhccCHHHHHHhccCcceeEEee---ccceeeEEEEeec----------------cCCCCCcceee
Confidence 3567788888888876666666666665544443333 4455666666432 13457899999
Q ss_pred EEeCccccc-CCHHHHHHHHHHHHHh
Q psy16746 87 LGVSEDYRR-NGIASLLLDNLISHLT 111 (247)
Q Consensus 87 l~V~p~~rg-~GiG~~Ll~~l~~~a~ 111 (247)
++|.++.|| .||+..+.+-+.+..-
T Consensus 406 fAVl~~aQGs~gisd~vfniM~e~fP 431 (495)
T COG5630 406 FAVLDDAQGSEGISDAVFNIMREEFP 431 (495)
T ss_pred eeccccccccchHHHHHHHHHHHhCc
Confidence 999999999 9999999988877543
No 120
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=84.66 E-value=16 Score=28.06 Aligned_cols=103 Identities=18% Similarity=0.138 Sum_probs=68.1
Q ss_pred CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhcc
Q psy16746 36 PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAEN 115 (247)
Q Consensus 36 ~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~ 115 (247)
++..++-+.+.+.++|+..+...+ ......+ -.-+|++|| .+...-....+++. +.
T Consensus 36 ~~~~Y~gVyeg~~l~Gi~~v~~i~-------------------~~~vecH-a~y~P~fRG--~a~~~~~~F~kwlL--~N 91 (151)
T PF11039_consen 36 PDQLYLGVYEGGQLGGIVYVEEIQ-------------------PSVVECH-AMYDPGFRG--YALEIGRLFCKWLL--EN 91 (151)
T ss_pred CccEEEEEEeceEEEEEEEEEEEe-------------------eeeEEEE-eeeccccch--hHHHHHHHHHHHHh--cC
Confidence 566778888889999999888543 1233334 344999998 77777777777776 45
Q ss_pred CCccEEEEEEEcCCHHHHHHHHhCCCEEeeeecceeccCCcccceEEEEE
Q psy16746 116 SSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVL 165 (247)
Q Consensus 116 ~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d~~~m~~ 165 (247)
..+..+..-|...-.-.+-.-+-+|.+.+|.+.+|+. |. .|+..+..
T Consensus 92 s~f~~vit~vp~kt~~Grvic~llg~~RVG~id~~~~--g~-~~vTlYq~ 138 (151)
T PF11039_consen 92 SPFQNVITFVPDKTRYGRVICRLLGARRVGHIDDYFK--GV-DGVTLYQL 138 (151)
T ss_pred CceeEEEEecccccccchhHhhhhCCceeeeHHHHhc--CC-CceEEEEc
Confidence 6666554434333333444455579999999999885 22 25555544
No 121
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=84.38 E-value=17 Score=29.81 Aligned_cols=126 Identities=14% Similarity=0.065 Sum_probs=77.9
Q ss_pred CCCChhhHHHHHHhhcCCCC-----CCCchhHHHHhhcC--CCeEEEEEEECC-EEEEEEEEEeeeccccCccchhhhhc
Q psy16746 2 NSRSPDYQANVLTSTSLRHS-----GNYPLSWYKDITSE--PSFYSLAALYNG-VIIGLIVAEILQYTSLNKEDKDILAS 73 (247)
Q Consensus 2 ~~~~~~d~~~i~~l~~~~fp-----~~~~~~~~~~~~~~--~~~~~~va~~~~-~iVG~~~~~~~~~~~~~~~~~~~~~~ 73 (247)
|..++.|.+++..|...... ..++++..++++.. .-..++|.++++ +|..++.+...++.-+....
T Consensus 32 R~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k------ 105 (190)
T PF02799_consen 32 RPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPK------ 105 (190)
T ss_dssp EE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSS------
T ss_pred ccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCC------
Confidence 56788999999888765432 12566777777644 345677887775 99999999876543322110
Q ss_pred ccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 74 ~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
...-+.+|.. +.+...-+ -..|+..++-.|+ +.|++..-+--.-+|. .|.+.++|..-.-
T Consensus 106 --~~~l~aAY~f-Y~~~~~~~----l~~Lm~DaLi~Ak---~~gfDVFNaLd~mdN~---~fL~~lKFg~GdG 165 (190)
T PF02799_consen 106 --HKTLKAAYSF-YYVATSTR----LKELMNDALILAK---NEGFDVFNALDLMDNS---SFLEDLKFGPGDG 165 (190)
T ss_dssp --SSEEEEEEEE-EEEESSSH----HHHHHHHHHHHHH---HTTESEEEEESTTTGG---GTTTTTT-EEEEE
T ss_pred --ccceeeeeee-eeeecCCC----HHHHHHHHHHHHH---HcCCCEEehhhhccch---hhHhhCCccCCCC
Confidence 1123467766 44444333 4677888888887 8999987665555554 5899999995433
No 122
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=82.26 E-value=5.2 Score=34.82 Aligned_cols=28 Identities=14% Similarity=0.224 Sum_probs=25.1
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHh
Q psy16746 84 ILSLGVSEDYRRNGIASLLLDNLISHLT 111 (247)
Q Consensus 84 I~~l~V~p~~rg~GiG~~Ll~~l~~~a~ 111 (247)
+.-|.|.|.||++|+|+.|++..-+.++
T Consensus 158 LaCIltLPpyQrkGyG~~LI~fSYeLSr 185 (290)
T PLN03238 158 LACILTLPPYQRKGYGKFLISFAYELSK 185 (290)
T ss_pred EEEEEecChhhhccHhHhHHHHHhHHhh
Confidence 4457799999999999999999999887
No 123
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=81.35 E-value=12 Score=33.91 Aligned_cols=119 Identities=8% Similarity=-0.030 Sum_probs=78.6
Q ss_pred CCChhhHHHHHHhhcCCCCCC-----CchhHHHHhhcC--CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhccc
Q psy16746 3 SRSPDYQANVLTSTSLRHSGN-----YPLSWYKDITSE--PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSF 75 (247)
Q Consensus 3 ~~~~~d~~~i~~l~~~~fp~~-----~~~~~~~~~~~~--~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~ 75 (247)
.+++++++.+..++...+... .+.++++.+.+. ++...+++..+|++||+.....
T Consensus 209 ~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~~m~~~~~l~~A~~~g~~Va~aL~l~------------------ 270 (370)
T PF04339_consen 209 EITDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAETMPEQVVLVVARRDGQPVAFALCLR------------------ 270 (370)
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHHhCcCCEEEEEEEECCeEEEEEEEEE------------------
Confidence 467888888888877655432 255677766655 5566778889999999998875
Q ss_pred CCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeeccee
Q psy16746 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYY 151 (247)
Q Consensus 76 ~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~ 151 (247)
..+..|-...+...++.+.-. ....-..+++|- +.|++++......+ -=...||..+.....++
T Consensus 271 --~~~~LyGRYwG~~~~~~~LHF-e~cYYq~Ie~aI---~~Gl~~f~~GaqGE------HK~~RGf~P~~t~S~H~ 334 (370)
T PF04339_consen 271 --GDDTLYGRYWGCDEEIPFLHF-ELCYYQGIEYAI---EHGLRRFEPGAQGE------HKIARGFEPVPTYSAHW 334 (370)
T ss_pred --eCCEEEEeeecccccccCcch-HHHHHHHHHHHH---HcCCCEEECCcchh------HHHHcCCccccceeeee
Confidence 335555555556666655442 334567888998 99999875433221 12245999887765444
No 124
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=78.65 E-value=23 Score=31.15 Aligned_cols=92 Identities=22% Similarity=0.248 Sum_probs=65.5
Q ss_pred EEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhh------c
Q psy16746 41 LAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTA------E 114 (247)
Q Consensus 41 ~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~------~ 114 (247)
.++.+.+.+|+.+.+.+....+ ..+.-+.-|..+.|+.=|..-|+-..|++-++-.+++- .
T Consensus 172 ~IIvYRetPIAiisl~~~~~~S-------------t~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~ 238 (304)
T PF11124_consen 172 HIIVYRETPIAIISLVPNKDQS-------------TKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKG 238 (304)
T ss_pred eEEEEcCCceEEEEeccccccC-------------CCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccc
Confidence 4566778899999888643211 12334677999999999999999999999986555510 1
Q ss_pred cCCc-cEEEEEEEcCCHHHHHHHHhCCCEEee
Q psy16746 115 NSSC-KAIFLHVLTSNKPAIHFYEKRRFRLHS 145 (247)
Q Consensus 115 ~~g~-~~i~l~v~~~N~~a~~fy~k~GF~~~g 145 (247)
+.|. =.+.+++.+-........++.||+.+.
T Consensus 239 k~~~si~ll~d~YSFD~~~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 239 KKGCSIKLLVDVYSFDKDMKKTLKKKGFKKIS 270 (304)
T ss_pred cccceEEEEEEeeeccHHHHHHHHHCCCeeee
Confidence 1122 123445667788999999999999876
No 125
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=78.55 E-value=52 Score=29.89 Aligned_cols=141 Identities=8% Similarity=0.007 Sum_probs=84.7
Q ss_pred CCCCChhhHHHHHHhhcCCCCCCCc-hhHHHHhhcCC--------CeEEEEEEECCEEEEEEEEEeeeccccCcc-c---
Q psy16746 1 MNSRSPDYQANVLTSTSLRHSGNYP-LSWYKDITSEP--------SFYSLAALYNGVIIGLIVAEILQYTSLNKE-D--- 67 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~fp~~~~-~~~~~~~~~~~--------~~~~~va~~~~~iVG~~~~~~~~~~~~~~~-~--- 67 (247)
|+.+.+++++.+..- .. .++. .+|+..+-.+. .-..+++.++|++||.+-+..+.++...-. |
T Consensus 2 i~~I~~~~W~~l~~~--~~--~PF~~~~fL~aLE~sg~v~~~tGW~p~hl~~~~~~~lvaa~P~YlK~hS~GEyvFD~~W 77 (370)
T PF04339_consen 2 ISEIPAADWDALAGP--DD--NPFLRHAFLAALEESGSVGPETGWQPRHLTLRDGGRLVAAAPLYLKSHSYGEYVFDWAW 77 (370)
T ss_pred hhhCCHHHHHHHhCC--CC--CchhhHHHHHHHHHcCCcCCCCCCcceEEEEEECCEEEEEeeeeeecccCcceehhHHH
Confidence 466788888888331 11 1222 34444443331 134578888999999999987764422100 0
Q ss_pred --------hhhhhcc---cCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHH
Q psy16746 68 --------KDILASS---FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFY 136 (247)
Q Consensus 68 --------~~~~~~~---~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy 136 (247)
....+.. ..-.+-.+ ..+.++|......+...|++.+.+.+. +.|+..+.+. -.++.-....
T Consensus 78 a~a~~r~g~~YYPKlv~avPfTPv~G--~R~l~~~~~~~~~~~~~L~~~~~~~a~---~~~~Ss~h~l--F~~~~~~~~l 150 (370)
T PF04339_consen 78 ADAYQRAGLRYYPKLVGAVPFTPVTG--PRLLIAPGADRAALRAALLQALEQLAE---ENGLSSWHIL--FPDEEDAAAL 150 (370)
T ss_pred HHHHHHhccccCcceEeeeCCCCCcc--cceeECCCCCHHHHHHHHHHHHHHHHH---HcCCCcceee--cCCHHHHHHH
Confidence 0000000 00011122 257788888888999999999999998 8888777653 3344555777
Q ss_pred HhCCCEEeeeecceec
Q psy16746 137 EKRRFRLHSFLPYYYS 152 (247)
Q Consensus 137 ~k~GF~~~g~~~~~~~ 152 (247)
+..||.........+.
T Consensus 151 ~~~G~~~r~~~qf~W~ 166 (370)
T PF04339_consen 151 EEAGFLSRQGVQFHWH 166 (370)
T ss_pred HhCCCceecCCceEEe
Confidence 8999998655554443
No 126
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=77.06 E-value=12 Score=27.64 Aligned_cols=48 Identities=15% Similarity=0.321 Sum_probs=36.9
Q ss_pred CCcEEEEEEEEeCccccc-CCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHH
Q psy16746 78 HIEVGYILSLGVSEDYRR-NGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPA 132 (247)
Q Consensus 78 ~~~~~~I~~l~V~p~~rg-~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a 132 (247)
...++|+..++|.++.|| .|++..+.+++.+... +.+.-.++++|+..
T Consensus 36 ~~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~fp-------~~L~Wrsr~~n~~n 84 (108)
T cd04266 36 PEKIAYLDKFAVLPKAQGSDGIADILFNAMLDGFP-------NELIWRSRKDNPVN 84 (108)
T ss_pred CCCceEEEEEEEccccccccchHHHHHHHHHHcCC-------CceEEEeCCCCccc
Confidence 357899999999999997 8999999998887321 22555677777643
No 127
>KOG1472|consensus
Probab=76.73 E-value=1 Score=43.96 Aligned_cols=122 Identities=16% Similarity=0.187 Sum_probs=82.9
Q ss_pred CchhHHHHhhcCCCeEEEEEEECCE-EEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHH
Q psy16746 24 YPLSWYKDITSEPSFYSLAALYNGV-IIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLL 102 (247)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~va~~~~~-iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~L 102 (247)
.+.++..+...+..+...+...+++ +||-++.... .......|..-+|..+-|-+|.|+.+
T Consensus 405 mpkEyi~rlv~d~~h~~~~~~~d~~g~vggi~~r~f------------------~~k~f~eivf~av~~~eqv~g~g~hl 466 (720)
T KOG1472|consen 405 MPKEYISRLVFDTSHHVMARIKDNEGVVGGICFRPF------------------PEKGFTEIVFCAVTTDEQVKGSGTHL 466 (720)
T ss_pred chHHHHHhhccccccccceeeccccccccccccCcC------------------cccCCcceeeccccCcccccccCcCc
Confidence 4556666666666666666555555 8888887753 25567778889999999999999999
Q ss_pred HHHHHHHHhhhccCC-ccEEEEEEEcCCHHHHHHHHhCCCEEeeeecc--eeccCCcccceEEEEEEecC
Q psy16746 103 LDNLISHLTTAENSS-CKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPY--YYSIKGRSRDGFTYVLYING 169 (247)
Q Consensus 103 l~~l~~~a~~~~~~g-~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~--~~~~~g~~~d~~~m~~~l~~ 169 (247)
++++.++.. ... +.... ... ...|+..+.+.||...-.... |....-.+..+..|.+.+..
T Consensus 467 mnhlkd~~~---~~~~i~~~l--tya-d~~aigyfkkqgfs~ei~~~~~~~~g~ikdye~~tl~~c~l~~ 530 (720)
T KOG1472|consen 467 MNHLKDYVR---SSSTIDYAL--TYA-DEGAIGYFKKQGFSKEIKFEKSPYVGYIKDYEGGTLMPCELLP 530 (720)
T ss_pred hhhHHHHhh---ccchHHHHH--Hhh-hhcccccccCccchhhcccccCcCccccccccCccccchhhcc
Confidence 999999987 443 33331 222 346788999999997766554 33333445555666665543
No 128
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=76.19 E-value=57 Score=29.88 Aligned_cols=197 Identities=13% Similarity=0.126 Sum_probs=94.9
Q ss_pred ChhhHHHHHHhhcCCCCCCCchhHHHHhhcCC-CeEEEEEEEC-CEEEEEEEEEeeeccccCccchhhhhcccCCCCcEE
Q psy16746 5 SPDYQANVLTSTSLRHSGNYPLSWYKDITSEP-SFYSLAALYN-GVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVG 82 (247)
Q Consensus 5 ~~~d~~~i~~l~~~~fp~~~~~~~~~~~~~~~-~~~~~va~~~-~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (247)
+++.+++...-+..... -.+..|-+-..... ....+....+ +.|+|.+++..... ......+
T Consensus 2 t~~e~d~f~~~~~~~~f-lQs~~wa~vk~~~gw~~~~vgv~~d~~~v~aa~ll~~~~~---------------~~g~~~~ 65 (406)
T PF02388_consen 2 TAEEFDAFVENHPQGNF-LQSSEWAEVKEKRGWEVERVGVKDDGGEVAAAALLLRKKP---------------FKGFKYA 65 (406)
T ss_dssp -HHHHHHHHHCSTT--C-CCSHHHHHHCHHTTSEEEEEEEE-TTS-EEEEEEEEEEEC---------------TTTCEEE
T ss_pred CHHHHHHHHHhCCCCCc-chHHHHHHHHHHCCCeEEEEEEEeCCCeEEEEEEEEEecc---------------CCceeEE
Confidence 45666666444422211 12233333221222 2333444554 67777665554320 1122345
Q ss_pred EEEEEEeCc--ccccCCHHHHHHHHHHHHHhhhccCCccEEEEEE---------------EcCCHHHHHHHHhCCCEEee
Q psy16746 83 YILSLGVSE--DYRRNGIASLLLDNLISHLTTAENSSCKAIFLHV---------------LTSNKPAIHFYEKRRFRLHS 145 (247)
Q Consensus 83 ~I~~l~V~p--~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v---------------~~~N~~a~~fy~k~GF~~~g 145 (247)
||.. -| +|...-+-..+++.+.++++ ..++-.|.++. ...|...+..++++||+..+
T Consensus 66 yipr---GPv~d~~d~ell~~f~~~Lk~~ak---k~~a~~lridP~~~~~~~~~~g~~~~~~~~~~~~~~l~~~G~~~~g 139 (406)
T PF02388_consen 66 YIPR---GPVMDYSDEELLEFFLEELKKYAK---KKRALFLRIDPNVIYQERDEDGEPIEGEENDELIENLKALGFRHQG 139 (406)
T ss_dssp EETT-----EC-TT-HHHHHHHHHHHHHHHC---TTTEEEEEE--S-EEECE-TTS-EEEE-S-THHHHHHHHTT-CCTS
T ss_pred EECC---CCCCCCCCHHHHHHHHHHHHHHHH---HCCEEEEEEeCchhhhhcccccccccCcchHHHHHHHHhcCceecC
Confidence 5432 34 66777788999999999998 76665554431 12466778999999999888
Q ss_pred eecceeccCCcccceEEEEEEecCCCCCcchhHHHHHHH----HHhhhhhcccc---ccCCcchhhhhhhhhhccCCCCC
Q psy16746 146 FLPYYYSIKGRSRDGFTYVLYINGGHAAWSLCDYVKHWC----ESLYSKEFLSK---KKGIRNWLVCIKYLKCQDWFPID 218 (247)
Q Consensus 146 ~~~~~~~~~g~~~d~~~m~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~w~~~~~~~~~~~~~~~~ 218 (247)
....+- +...-...|+++|.+.. +..++..+..-+ ....++.|... ...+..+...-..+-=+.-|...
T Consensus 140 ~~~~~~---~~~qpr~~~v~dL~~~~-~e~ll~~~~~~~R~~IrkA~k~GV~vr~~~~e~l~~F~~l~~~T~~R~~f~~r 215 (406)
T PF02388_consen 140 FTKGYD---DTIQPRWTYVKDLTGFS-EEELLKSFSKKTRYNIRKAEKKGVEVREGSREELDDFYDLYKETAERKGFSIR 215 (406)
T ss_dssp -SSSTT---SSSS-SEEEEEEGCC-T-CHHCHHCS-HHHHHHHHHHHCTTEEEEEE-CHHHHHHHHHHHHHHHHTT----
T ss_pred cccCCC---cccCccEEEEEECCCCC-HHHHHHHhcHHHHHHHHHhhcCceEEEEcCHHHHHHHHHHHHHHHhhCCCccc
Confidence 766331 22344568888987632 222222222222 22222233222 24466777777777666667664
Q ss_pred CCcchhhhhc
Q psy16746 219 YPLSWYKDIT 228 (247)
Q Consensus 219 ~~~~~~~~~~ 228 (247)
|.+.|+.+.
T Consensus 216 -~~~Yf~~l~ 224 (406)
T PF02388_consen 216 -SLEYFENLY 224 (406)
T ss_dssp --HHHHHHHH
T ss_pred -CHHHHHHHH
Confidence 667777654
No 129
>PLN03239 histone acetyltransferase; Provisional
Probab=74.91 E-value=9.7 Score=34.10 Aligned_cols=28 Identities=11% Similarity=0.078 Sum_probs=25.0
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHh
Q psy16746 84 ILSLGVSEDYRRNGIASLLLDNLISHLT 111 (247)
Q Consensus 84 I~~l~V~p~~rg~GiG~~Ll~~l~~~a~ 111 (247)
+.-|.|.|.||++|+|+.|++..-+.++
T Consensus 216 LaCIltLPpyQrkGyG~lLI~fSYeLSr 243 (351)
T PLN03239 216 LACILTFPAHQRKGYGRFLIAFSYELSK 243 (351)
T ss_pred eEEEEecChhhhcchhhhhHhhhhHhhh
Confidence 4457799999999999999999999887
No 130
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=74.10 E-value=29 Score=25.23 Aligned_cols=45 Identities=11% Similarity=0.218 Sum_probs=37.0
Q ss_pred CcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHH
Q psy16746 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKP 131 (247)
Q Consensus 79 ~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~ 131 (247)
..++++..++|.++-++.|++..+.+.+.+. + ..+.-.++++|+.
T Consensus 31 ~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d-~-------~~L~Wrsr~~n~~ 75 (98)
T cd03173 31 NSIPYLDKFAVSDHLWLNNVTDNIFNLIRKD-F-------PSLLWRVRENDAN 75 (98)
T ss_pred CCCEEEEEEEEcccccccCHHHHHHHHHHhh-C-------CeeEEEeCCCCCc
Confidence 4688999999999999999999999988874 3 4666667777754
No 131
>PTZ00064 histone acetyltransferase; Provisional
Probab=73.57 E-value=8.8 Score=36.00 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=25.0
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHh
Q psy16746 84 ILSLGVSEDYRRNGIASLLLDNLISHLT 111 (247)
Q Consensus 84 I~~l~V~p~~rg~GiG~~Ll~~l~~~a~ 111 (247)
+.-|.|.|.||++|+|+.|++..-+.++
T Consensus 387 LACILtLPpyQRKGYGklLIdfSYeLSr 414 (552)
T PTZ00064 387 LACILTLPCYQRKGYGKLLVDLSYKLSL 414 (552)
T ss_pred eEEEEecchhhhcchhhhhhhhhhhhhh
Confidence 4457789999999999999999999887
No 132
>PRK04531 acetylglutamate kinase; Provisional
Probab=72.15 E-value=15 Score=33.66 Aligned_cols=98 Identities=10% Similarity=0.096 Sum_probs=63.6
Q ss_pred hHHHHHHhhcCCCCCCCchhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEE
Q psy16746 8 YQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87 (247)
Q Consensus 8 d~~~i~~l~~~~fp~~~~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l 87 (247)
|.+.+..+....|.......+++ . .. .+.++.++..-|.+++.. .+...|+..+
T Consensus 263 d~~~l~~ll~~sf~r~~~~~y~~----~-~~-~~~~y~~~~y~~~Aiv~~--------------------~~~~~~Ldkf 316 (398)
T PRK04531 263 DLERLNLLIESSFGRTLKPDYFD----T-TQ-LLRAYVSENYRAAAILTE--------------------TGGGPYLDKF 316 (398)
T ss_pred CHHHHHHHHhhhcccchHHHHhc----c-CC-ceEEEEeCCCcEEEEEec--------------------CCCceEeEEE
Confidence 66677777777776444444444 2 12 233444554555555542 2358999999
Q ss_pred EeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhC
Q psy16746 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139 (247)
Q Consensus 88 ~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~ 139 (247)
+|.++.||.|++..+.+.+.+.. ..+.-.++++|+...=+|+|.
T Consensus 317 ~v~~~~~~~~v~d~vf~~~~~~~--------~~L~Wrsr~~n~~~~Wyf~~s 360 (398)
T PRK04531 317 AVLDDARGEGLGRAVWNVMREET--------PQLFWRSRHNNTINKFYYAES 360 (398)
T ss_pred EEccchhhcChHHHHHHHHHhhC--------CceEEEcCCCCCccceeeecc
Confidence 99999999999999999988753 346667787776443344443
No 133
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=68.99 E-value=8.2 Score=35.78 Aligned_cols=28 Identities=14% Similarity=0.204 Sum_probs=24.8
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHh
Q psy16746 84 ILSLGVSEDYRRNGIASLLLDNLISHLT 111 (247)
Q Consensus 84 I~~l~V~p~~rg~GiG~~Ll~~l~~~a~ 111 (247)
+.-|.|.|.||++|+|+.|++..-+..+
T Consensus 309 LaCIltlP~yQrkGyG~~LI~~SYeLSr 336 (450)
T PLN00104 309 LACILTLPPYQRKGYGKFLIAFSYELSK 336 (450)
T ss_pred eEEEEecchhhhcchhheehhheehhhh
Confidence 4457789999999999999999988887
No 134
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=66.46 E-value=34 Score=27.72 Aligned_cols=93 Identities=17% Similarity=0.211 Sum_probs=65.4
Q ss_pred EECCEEEEEEEEEeeeccccCcc---chhh---hhccc---CCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhc
Q psy16746 44 LYNGVIIGLIVAEILQYTSLNKE---DKDI---LASSF---DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAE 114 (247)
Q Consensus 44 ~~~~~iVG~~~~~~~~~~~~~~~---~~~~---~~~~~---~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~ 114 (247)
..+|++++.+.+..-....+=.| +.++ +.... .......+|+.++.. +.|.++.|+..+...+.
T Consensus 41 ~~~g~l~aa~G~r~A~~~~LFlEqYLd~piE~~l~~~~g~~v~R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~--- 113 (179)
T PF12261_consen 41 DSDGELVAAAGLRFASQEPLFLEQYLDQPIEQLLSRRFGRPVSRSQIVEVGNLASF----SPGAARLLFAALAQLLA--- 113 (179)
T ss_pred cCCCCEEEEEeecccCCCCcchhhhcCCcHHHHHHhhcCCCcchhheeEeechhhc----CcccHHHHHHHHHHHHH---
Confidence 45788888888876554333111 1111 11111 234567888887765 47899999999999998
Q ss_pred cCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 115 NSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 115 ~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
..|++.+ |...+..-.+.++|+|......
T Consensus 114 ~~g~~w~---vfTaT~~lr~~~~rlgl~~~~L 142 (179)
T PF12261_consen 114 QQGFEWV---VFTATRQLRNLFRRLGLPPTVL 142 (179)
T ss_pred HCCCCEE---EEeCCHHHHHHHHHcCCCceec
Confidence 9999988 6666889999999999987654
No 135
>KOG2696|consensus
Probab=61.86 E-value=17 Score=32.83 Aligned_cols=45 Identities=13% Similarity=0.201 Sum_probs=32.0
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCC
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSN 129 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N 129 (247)
...|.-+-+.|.||++|+|+.|++.+..... ... .-+.++|...+
T Consensus 217 R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~--~~p--~v~DiTVEdPs 261 (403)
T KOG2696|consen 217 RPRISQMLILPPFQGKGLGSQLYEAIARDYL--EEP--TVLDITVEDPS 261 (403)
T ss_pred hhhhheeEEeccccCCchHHHHHHHHHHhhc--cCC--ceeEEEecCch
Confidence 4456678899999999999999999996553 243 33455554433
No 136
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=61.14 E-value=39 Score=35.26 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=62.6
Q ss_pred CChhhHHHHHHhhcCCCCCCCch------hHHHHhhcCCCeEEEEEE-ECCEEEEEEEEEeeeccccCccchhhhhcccC
Q psy16746 4 RSPDYQANVLTSTSLRHSGNYPL------SWYKDITSEPSFYSLAAL-YNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76 (247)
Q Consensus 4 ~~~~d~~~i~~l~~~~fp~~~~~------~~~~~~~~~~~~~~~va~-~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (247)
..++..+++.++.+.|-...-.. ..+.+. ......++.+. .+|+|+|++.+.+..
T Consensus 381 ~~~~~~~~L~~isd~Wl~~~~EkGFSm~LGr~~~~-~~~~~~i~~a~d~~G~i~af~s~~p~~----------------- 442 (1094)
T PRK02983 381 LPAEEMAQVIARADAWRDTETERGFSMALGRLGDP-ADGDCLLVEAHDADGQVVALLSFVPWG----------------- 442 (1094)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCceeeecCcccch-hcCceEEEEEECCCCeEEEEEEEeeeC-----------------
Confidence 44556777777777776542111 111111 11223333343 368999999998631
Q ss_pred CCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEc
Q psy16746 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT 127 (247)
Q Consensus 77 ~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~ 127 (247)
.+.+.+.-+--+|+ --.|+...|+.+++.+++ +.|++.+.|...+
T Consensus 443 --~~g~slDLMRr~pd-apnGvmE~L~~~l~~~~k---~~G~~~~sLg~AP 487 (1094)
T PRK02983 443 --RRGLSLDLMRRSPD-APNGVIELMVAELALEAE---SLGITRISLNFAV 487 (1094)
T ss_pred --CCCEEEEecccCCC-CCCCHHHHHHHHHHHHHH---HcCCCEEEechhh
Confidence 12244453344555 468999999999999999 9999999987655
No 137
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=58.64 E-value=50 Score=31.55 Aligned_cols=101 Identities=15% Similarity=0.077 Sum_probs=64.3
Q ss_pred CChhhHHHHHHhhcCCCCCCC------chhHHHHhhcCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCC
Q psy16746 4 RSPDYQANVLTSTSLRHSGNY------PLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDK 77 (247)
Q Consensus 4 ~~~~d~~~i~~l~~~~fp~~~------~~~~~~~~~~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (247)
..++.++++.++.+.|-.... ....++.... .....-+...+|+|+|++.+.+..
T Consensus 354 ~~~~~l~eL~~iSD~Wl~~~~~rEkgFsLG~fdp~yl-~~~~va~~~~~g~VvaFa~l~~~~------------------ 414 (538)
T COG2898 354 QSPAELDELRAISDEWLDHKTRREKGFSLGFFDPRYL-DIFPVAAVDNEGEVVAFANLMPTG------------------ 414 (538)
T ss_pred cChHHHHHHHHhCHHhhhcCCcccceeeccCCCcccc-ccceeeEEcCCCCeEEEEeecccC------------------
Confidence 456778888888777754221 1111111110 122334445568899999988632
Q ss_pred CCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEc
Q psy16746 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT 127 (247)
Q Consensus 78 ~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~ 127 (247)
...-..+.-+--+|+. -+|+...|...++.+++ +.|++++.+...|
T Consensus 415 ~~~~~SlDlMR~sp~a-p~g~mdfLf~~li~~aK---e~G~~~fsLgmAp 460 (538)
T COG2898 415 GKEGYSLDLMRRSPDA-PNGTMDFLFSELILWAK---EEGYQRFSLGMAP 460 (538)
T ss_pred CcceeEEEeeecCCCC-CchHHHHHHHHHHHHHH---HcCCeEEecCCcc
Confidence 2234445555566663 47999999999999999 9999999886543
No 138
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=55.08 E-value=20 Score=26.18 Aligned_cols=17 Identities=18% Similarity=0.382 Sum_probs=14.7
Q ss_pred CHHHHHHHHhCCCEEee
Q psy16746 129 NKPAIHFYEKRRFRLHS 145 (247)
Q Consensus 129 N~~a~~fy~k~GF~~~g 145 (247)
=++|++||+.+||+...
T Consensus 11 l~~s~~FY~~lGf~~~~ 27 (124)
T cd09012 11 LEKSTAFYTALGFEFNP 27 (124)
T ss_pred HHHHHHHHHHCCCEEcc
Confidence 37899999999999764
No 139
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=51.07 E-value=34 Score=26.18 Aligned_cols=44 Identities=18% Similarity=0.155 Sum_probs=34.8
Q ss_pred cccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEE
Q psy16746 93 YRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143 (247)
Q Consensus 93 ~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~ 143 (247)
-||-|||+.+++.+.+... ..+++...-.|.-|-.-..|.|=..
T Consensus 7 GQGGGiG~~iv~~lr~~~~-------~~~eI~AlGTNa~AT~~MlKaGA~~ 50 (131)
T PF12953_consen 7 GQGGGIGKQIVEKLRKELP-------EEVEIIALGTNAIATSAMLKAGANE 50 (131)
T ss_pred CCCChhHHHHHHHHHHhCC-------CCcEEEEEehhHHHHHHHHHcCCCC
Confidence 3899999999999999775 2355556677988888888888653
No 140
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=46.84 E-value=79 Score=27.03 Aligned_cols=61 Identities=11% Similarity=0.202 Sum_probs=46.3
Q ss_pred CCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEE
Q psy16746 46 NGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHV 125 (247)
Q Consensus 46 ~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v 125 (247)
+|++|+++....-+ .....+. ..-||++....+|+-.+-.=+.+|+ +.|...++|.-
T Consensus 159 ~G~LvAVavtDvL~-------------------dGlSsVY-~FydPd~s~~SLGt~~iL~~I~~aq---~~~l~yvYLGY 215 (253)
T COG2935 159 EGKLVAVAVTDVLP-------------------DGLSSVY-TFYDPDMSKRSLGTLSILDQIAIAQ---RLGLPYVYLGY 215 (253)
T ss_pred CCcEEEEEeeeccc-------------------CcceeEE-EEeCCChhhhcchHHHHHHHHHHHH---HhCCCeEEEEE
Confidence 68899888776432 1122223 4559999999999999988889898 99999999976
Q ss_pred EcCC
Q psy16746 126 LTSN 129 (247)
Q Consensus 126 ~~~N 129 (247)
...+
T Consensus 216 wI~~ 219 (253)
T COG2935 216 WIKG 219 (253)
T ss_pred EECC
Confidence 5554
No 141
>KOG2747|consensus
Probab=45.86 E-value=33 Score=31.35 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=24.2
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHh
Q psy16746 84 ILSLGVSEDYRRNGIASLLLDNLISHLT 111 (247)
Q Consensus 84 I~~l~V~p~~rg~GiG~~Ll~~l~~~a~ 111 (247)
+.-|.|.|-||++|+|+.|++-.-+..+
T Consensus 263 laCILtLPpyQRkGYGklLIdFSYeLSr 290 (396)
T KOG2747|consen 263 LACILTLPPYQRKGYGKLLIDFSYELSR 290 (396)
T ss_pred eeeeeecChhhhcccchhhhhhhhhhhc
Confidence 3447789999999999999999888876
No 142
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=45.65 E-value=21 Score=25.82 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=16.6
Q ss_pred HHHHHHHHhCCCEEeeeecc
Q psy16746 130 KPAIHFYEKRRFRLHSFLPY 149 (247)
Q Consensus 130 ~~a~~fy~k~GF~~~g~~~~ 149 (247)
.+|++||+.+||+.......
T Consensus 13 ~~s~~FY~~LGf~~~~~~~~ 32 (113)
T cd08356 13 AESKQFYQALGFELEWENDN 32 (113)
T ss_pred HHHHHHHHHhCCeeEecCCC
Confidence 78999999999998866543
No 143
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=45.61 E-value=22 Score=25.70 Aligned_cols=26 Identities=19% Similarity=0.326 Sum_probs=18.1
Q ss_pred EEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 120 AIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 120 ~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
.+.+.| .+=.+|++||+++||+....
T Consensus 3 ~i~l~V-~D~~~a~~FY~~LGf~~~~~ 28 (122)
T cd07235 3 AVGIVV-ADMAKSLDFYRRLGFDFPEE 28 (122)
T ss_pred eEEEEe-ccHHHHHHHHHHhCceecCC
Confidence 344544 33468999999999987543
No 144
>PHA02769 hypothetical protein; Provisional
Probab=45.49 E-value=25 Score=26.32 Aligned_cols=47 Identities=13% Similarity=0.192 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeee
Q psy16746 99 ASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 99 G~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
|-.|++.+...+..-..-|+..+...-.|+. |.++|.|.||+++|..
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdh--snaly~kagfk~vg~t 140 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDH--SNALYKKAGFKLVGQT 140 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCc--chhHHhhhhhhHhccc
Confidence 4555555554443222667776655555554 5579999999998864
No 145
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=42.15 E-value=38 Score=24.47 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=16.3
Q ss_pred HHHHHHHHhCCCEEeeeec
Q psy16746 130 KPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 130 ~~a~~fy~k~GF~~~g~~~ 148 (247)
.+|++||+++||+.....+
T Consensus 14 ~~s~~FY~~lG~~~~~~~~ 32 (120)
T cd08350 14 DATEAFYARLGFSVGYRQA 32 (120)
T ss_pred HHHHHHHHHcCCEEEecCC
Confidence 7899999999999876655
No 146
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=42.01 E-value=32 Score=25.67 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=21.0
Q ss_pred CccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 117 SCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 117 g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
+++.+.+.|. +=.+|++||+++||+..+.
T Consensus 3 ~i~Hi~i~v~-Dl~~s~~FY~~LG~~~~~~ 31 (142)
T cd08353 3 RMDNVGIVVR-DLEAAIAFFLELGLELEGR 31 (142)
T ss_pred eeeeEEEEeC-CHHHHHHHHHHcCCEEccc
Confidence 3456666554 3478899999999987654
No 147
>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=40.08 E-value=60 Score=24.56 Aligned_cols=18 Identities=17% Similarity=0.423 Sum_probs=14.4
Q ss_pred CHHHHHHHHh-CCCEEeee
Q psy16746 129 NKPAIHFYEK-RRFRLHSF 146 (247)
Q Consensus 129 N~~a~~fy~k-~GF~~~g~ 146 (247)
-.+|++||++ +||++..+
T Consensus 13 lerSi~FY~~vLG~~~~~~ 31 (127)
T cd08358 13 RNKTIKFYREVLGMKVLRH 31 (127)
T ss_pred HHHHHHHHHHhcCCEEEee
Confidence 4799999965 89997654
No 148
>KOG2779|consensus
Probab=37.16 E-value=3.2e+02 Score=24.88 Aligned_cols=132 Identities=14% Similarity=0.087 Sum_probs=77.6
Q ss_pred CCCCChhhHHHHHHhhcCC---C--CCCCchhHHHHhhcC--CCeEEEEEEE-CCEEEEEEEEEeeeccccCccchhhhh
Q psy16746 1 MNSRSPDYQANVLTSTSLR---H--SGNYPLSWYKDITSE--PSFYSLAALY-NGVIIGLIVAEILQYTSLNKEDKDILA 72 (247)
Q Consensus 1 ~~~~~~~d~~~i~~l~~~~---f--p~~~~~~~~~~~~~~--~~~~~~va~~-~~~iVG~~~~~~~~~~~~~~~~~~~~~ 72 (247)
+|...+.|.+++.+|.... | ...+.++-.++.+.. .--.++|.+. +|+|.+|+.+...++.-+.
T Consensus 263 ~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~~-------- 334 (421)
T KOG2779|consen 263 LREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTVMG-------- 334 (421)
T ss_pred cccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEeccccccC--------
Confidence 3567788888888886543 2 223555555555544 2234566665 7899999998865432111
Q ss_pred cccCCCCcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeeccee
Q psy16746 73 SSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYY 151 (247)
Q Consensus 73 ~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~~~~ 151 (247)
+.-...-..+|+. +.|+.+-+ -..|+..++-.++ ..|++.....-.-+|. .|..+++|-.-...-.||
T Consensus 335 ~~~~ktl~aaYly-Y~v~~~t~----~~~lvnDalilak---~~gfDVFNAld~meN~---~fl~~LkFg~GdG~l~YY 402 (421)
T KOG2779|consen 335 NPKYKTLQAAYLY-YNVATSTP----LLQLVNDALILAK---QKGFDVFNALDLMENE---SFLKDLKFGPGDGNLQYY 402 (421)
T ss_pred CCCcceeeeeeEE-EeccCCcc----HHHHHHHHHHHHH---hcCCceeehhhhhhhh---hHHHhcCcCcCCCceeEE
Confidence 1112233456655 44444411 3566777777777 8888877554444453 689999998654433333
No 149
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=37.14 E-value=3.3e+02 Score=25.13 Aligned_cols=83 Identities=11% Similarity=0.061 Sum_probs=60.6
Q ss_pred CCCCCchhHHHHhhcC----CCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEEEEeCccccc
Q psy16746 20 HSGNYPLSWYKDITSE----PSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRR 95 (247)
Q Consensus 20 fp~~~~~~~~~~~~~~----~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg 95 (247)
|...+...++.+.... .....+....+|.+|+...... .+...+-.-..+||++-.
T Consensus 250 f~~~~t~~fl~dL~~~~~~d~~~rl~gL~~G~~lvAV~~~lr--------------------~~~t~h~~l~a~dpe~~~ 309 (406)
T COG5653 250 FRAGWTRDFLRDLFTQRAEDGSGRLFGLHAGGRLVAVHGLLR--------------------QGGTYHAWLGAIDPEFAR 309 (406)
T ss_pred cccchHHHHHHHHHhccCcCCceEEEEEeeCCEEEEEEeeec--------------------cCCEEEEEeeccCHHHhh
Confidence 3334555666666533 4455667777889998887663 334444555789999999
Q ss_pred CCHHHHHHHHHHHHHhhhccCCccEEEEEE
Q psy16746 96 NGIASLLLDNLISHLTTAENSSCKAIFLHV 125 (247)
Q Consensus 96 ~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v 125 (247)
--=|..|+-.+++++- .+|+.++-+.|
T Consensus 310 ~SPG~~lf~d~i~~~~---~~g~~~~Dfgv 336 (406)
T COG5653 310 ASPGMLLFLDLIEWAC---GQGLARFDFGV 336 (406)
T ss_pred cCchHHHHHHHHHHHh---cCCCeEEeecC
Confidence 8999999999999998 99998887755
No 150
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.18 E-value=64 Score=26.99 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=27.1
Q ss_pred cCCccEEEEE---EEcCCHHHHHHHHhCCCEEeeee
Q psy16746 115 NSSCKAIFLH---VLTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 115 ~~g~~~i~l~---v~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
..|++++.+- +.+-|.+-+.|++++||......
T Consensus 115 al~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~~ 150 (238)
T COG3473 115 ALGAQRISVLTPYIDEVNQREIEFLEANGFEIVDFK 150 (238)
T ss_pred hhCcceEEEeccchhhhhhHHHHHHHhCCeEEEEee
Confidence 7788888764 45679999999999999988654
No 151
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=35.55 E-value=1.1e+02 Score=21.63 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=23.0
Q ss_pred ccEEEEEEEcCCHHHHHHHHhCCCEEe
Q psy16746 118 CKAIFLHVLTSNKPAIHFYEKRRFRLH 144 (247)
Q Consensus 118 ~~~i~l~v~~~N~~a~~fy~k~GF~~~ 144 (247)
...+.=.|...|..++||.+.+|++-.
T Consensus 56 Y~~l~N~V~~~N~~HIRfLk~lGA~f~ 82 (86)
T PF11090_consen 56 YPVLWNFVWVGNKSHIRFLKSLGAVFH 82 (86)
T ss_pred hhheeEEEEeCCHHHHHHHHhcCcEEc
Confidence 455777799999999999999999854
No 152
>KOG4387|consensus
Probab=34.17 E-value=2.4e+02 Score=22.94 Aligned_cols=79 Identities=11% Similarity=-0.011 Sum_probs=50.8
Q ss_pred EEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCC---HHHHHHHHhCCCEEeeeecceeccCCcccceEEE
Q psy16746 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSN---KPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTY 163 (247)
Q Consensus 87 l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N---~~a~~fy~k~GF~~~g~~~~~~~~~g~~~d~~~m 163 (247)
+..-|+-.=-+.-+.=+-++++.|. +++.+.++.+.....| .+-.+=+.-.||+.+....- ..-...|.+.|
T Consensus 105 ~~~IPdq~l~~gsKe~lvalLEfAE--ekl~~d~Vfi~F~K~R~dr~~LlrtfsyvGFEpvrp~HP---~~pp~~~~ffM 179 (191)
T KOG4387|consen 105 FFEIPDQALDVGSKEGLVALLEFAE--EKLHVDKVFICFDKNREDRAALLRTFSYVGFEPVRPDHP---VVPPRPDVFFM 179 (191)
T ss_pred EEecCcchhcccchHhHHHHHHHHH--HhhccceEEEEEecCccChHhhhhhehcceeeecCCCCC---CCCCccceEEE
Confidence 4444444445556666667777777 6788999999877654 33345555679988765311 12345789999
Q ss_pred EEEecCC
Q psy16746 164 VLYINGG 170 (247)
Q Consensus 164 ~~~l~~~ 170 (247)
++.+...
T Consensus 180 ~Y~~er~ 186 (191)
T KOG4387|consen 180 VYPLERD 186 (191)
T ss_pred EEeeccc
Confidence 9988543
No 153
>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su
Probab=32.95 E-value=68 Score=23.90 Aligned_cols=29 Identities=10% Similarity=0.163 Sum_probs=20.9
Q ss_pred cEEEEEEEcCCHHHHHHHHh-CCCEEeeeec
Q psy16746 119 KAIFLHVLTSNKPAIHFYEK-RRFRLHSFLP 148 (247)
Q Consensus 119 ~~i~l~v~~~N~~a~~fy~k-~GF~~~g~~~ 148 (247)
+.+.+.| ++=.+|++||++ +||+......
T Consensus 2 ~Hi~i~V-~D~e~s~~FY~~vLGf~~~~~~~ 31 (136)
T cd08342 2 DHVEFYV-GNAKQLASWFSTKLGFEPVAYHG 31 (136)
T ss_pred eEEEEEe-CCHHHHHHHHHHhcCCeEEEecC
Confidence 3455555 334788999999 9999877643
No 154
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin. The enzyme converts GTP and water to formate, 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)- pyrimidine and pyrophosphate, and requires magnesium as a cofactor. It is sometimes found as a bifunctional enzyme with 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP_synthase) IPR000422 from INTERPRO. ; GO: 0003935 GTP cyclohydrolase II activity, 0009231 riboflavin biosynthetic process; PDB: 2BZ0_B 2BZ1_A.
Probab=32.92 E-value=73 Score=25.35 Aligned_cols=32 Identities=22% Similarity=0.187 Sum_probs=20.1
Q ss_pred cCCccEEEEEEEcCCHHHHHHHHhCCCEEeeeec
Q psy16746 115 NSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148 (247)
Q Consensus 115 ~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~~~ 148 (247)
.+|+++|.| ...|+....-.+.+|-++++..|
T Consensus 137 dLGV~~~rL--Ltnnp~k~~~L~g~gleV~~~vp 168 (169)
T PF00925_consen 137 DLGVKKMRL--LTNNPRKYVALEGFGLEVVERVP 168 (169)
T ss_dssp HTT--SEEE--E-S-HHHHHHHHHTT--EEEEE-
T ss_pred HcCCCEEEE--CCCChhHHHHHhcCCCEEEEEec
Confidence 788888866 55678888889999998887754
No 155
>PF02100 ODC_AZ: Ornithine decarboxylase antizyme; InterPro: IPR002993 Ornithine decarboxylase antizyme (ODC-AZ) [] binds to, and destabilises, ornithine decarboxylase (ODC), a key enzyme in polyamine synthesis. ODC is then rapidly degraded. The expression of ODC-AZ requires programmed, ribosomal frameshifting which is modulated according to the cellular concentration of polyamines. High levels of polyamines induce a +1 ribosomal frameshift in the translation of mRNA for the antizyme leading to the expression of a full-length protein. At least two forms of ODC-AZ exist in mammals [] and the protein has been found in Drosophila (protein Gutfeeling).; GO: 0004857 enzyme inhibitor activity, 0008073 ornithine decarboxylase inhibitor activity; PDB: 1ZO0_A.
Probab=31.31 E-value=1.6e+02 Score=21.63 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=26.7
Q ss_pred CcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHH---HhCCCEEeee
Q psy16746 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFY---EKRRFRLHSF 146 (247)
Q Consensus 79 ~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy---~k~GF~~~g~ 146 (247)
.+..+|. +.+...++| -+.-+-++++.|. +..++.++.+.+.........+- .=.||+.+..
T Consensus 23 ~~~L~V~---ip~~~~~~~-~K~~lvaLLElAe--e~L~c~~vvic~~k~~~d~~~Llr~l~~vGF~lv~~ 87 (108)
T PF02100_consen 23 ERTLFVF---IPSSALGQG-SKESLVALLELAE--EKLGCSHVVICLDKNRPDRASLLRTLMWVGFELVTP 87 (108)
T ss_dssp TTEEEEE----SS---SS---SHHHHHHHHHHH--HHH----EEEEE---SS-HHHHHHHHTTT--EEE--
T ss_pred CCEEEEE---ECCcccccc-cHHHHHHHHHHhc--CcCCCCEEEEEEECCchhHHHhhhhcEeeccEecCC
Confidence 4455433 455555555 4555566777776 46899999998877665444444 4468887754
No 156
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=30.75 E-value=80 Score=22.50 Aligned_cols=27 Identities=7% Similarity=-0.016 Sum_probs=18.4
Q ss_pred cEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 119 KAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 119 ~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
..+.+.|.. =.+|.+||+.+||+....
T Consensus 5 ~hv~l~v~D-l~~s~~FY~~lGl~~~~~ 31 (113)
T cd07267 5 AHVRFEHPD-LDKAERFLTDFGLEVAAR 31 (113)
T ss_pred EEEEEccCC-HHHHHHHHHHcCCEEEEe
Confidence 344444432 368899999999987654
No 157
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=28.92 E-value=75 Score=26.93 Aligned_cols=44 Identities=16% Similarity=0.308 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhhccCCccEEEEEE---EcCCHHHHHHHHhCCCEEeeee
Q psy16746 101 LLLDNLISHLTTAENSSCKAIFLHV---LTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 101 ~Ll~~l~~~a~~~~~~g~~~i~l~v---~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
.-..++.+.++ .+|+++|.+.+ ..-|....+||++.||++....
T Consensus 106 t~~~A~~~AL~---alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~ 152 (239)
T TIGR02990 106 TPSSAAVDGLA---ALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFT 152 (239)
T ss_pred CHHHHHHHHHH---HcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeee
Confidence 34445556665 88999998842 3347888999999999998764
No 158
>PF13530 SCP2_2: Sterol carrier protein domain; PDB: 3SXN_C 3N7Z_A 3RYO_B 3R1K_A 3UY5_A 2HV2_F 2I00_D 2OZG_A.
Probab=27.92 E-value=1.8e+02 Score=23.93 Aligned_cols=74 Identities=12% Similarity=0.127 Sum_probs=43.7
Q ss_pred hhHHHHhh---cCCCeEEEEEEECCEEEEEEEEEeeeccccCccchhhhhcccCCCCcEEEEEE-EEeCcccccCCHHHH
Q psy16746 26 LSWYKDIT---SEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS-LGVSEDYRRNGIASL 101 (247)
Q Consensus 26 ~~~~~~~~---~~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~-l~V~p~~rg~GiG~~ 101 (247)
+.|++..+ ..+...+++...+|++.||+........ ...+...|.. ++.+++.+ ++
T Consensus 10 ~~~w~~~~~~~~~~~~~~~~~~~~g~~~GY~~y~~~~~~---------------~~~~~l~V~El~~~~~~A~-----~a 69 (218)
T PF13530_consen 10 EAWWRRLLREREKDRGYAVYYDEDGEPDGYVIYRFKDDW---------------EPGGTLEVRELVALDPEAY-----RA 69 (218)
T ss_dssp HHHHHHHCHTTCCGSEEEEEEECTSEEEEEEEEEEET-S---------------SSTTEEEEEEEEESSHHHH-----HH
T ss_pred HHHHHHHhhcccCCceEEEEECCCCCeeEEEEEEEcccC---------------CCCceEEEEEEEeCCHHHH-----HH
Confidence 45666666 3356666777788999999999875311 2335666654 45556532 34
Q ss_pred HHHHHHHHHhhhccCCccEEEEE
Q psy16746 102 LLDNLISHLTTAENSSCKAIFLH 124 (247)
Q Consensus 102 Ll~~l~~~a~~~~~~g~~~i~l~ 124 (247)
|++.+..+ ...+..+.+.
T Consensus 70 Ll~fl~~h-----~~~~~~v~~~ 87 (218)
T PF13530_consen 70 LLAFLASH-----RDQVDEVEWN 87 (218)
T ss_dssp HHHHHHTC-----CTTESEEEEE
T ss_pred HHHHHHhh-----hCcceEEEEE
Confidence 55555543 3455666653
No 159
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=27.55 E-value=46 Score=29.90 Aligned_cols=27 Identities=22% Similarity=0.228 Sum_probs=20.9
Q ss_pred EEEEeCcccccCCHHHHHHHHHHHHHh
Q psy16746 85 LSLGVSEDYRRNGIASLLLDNLISHLT 111 (247)
Q Consensus 85 ~~l~V~p~~rg~GiG~~Ll~~l~~~a~ 111 (247)
.-+-+.|-||++|+|..|++-.-...+
T Consensus 266 aCILtLP~yQRrGYG~lLIdFSY~Ls~ 292 (395)
T COG5027 266 ACILTLPPYQRRGYGKLLIDFSYLLSQ 292 (395)
T ss_pred EEEEecChhHhcccceEeeeeeeeccc
Confidence 345679999999999999886655443
No 160
>TIGR00068 glyox_I lactoylglutathione lyase. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.
Probab=27.00 E-value=73 Score=24.19 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=22.8
Q ss_pred cCCccEEEEEEEcCCHHHHHHHHh-CCCEEeee
Q psy16746 115 NSSCKAIFLHVLTSNKPAIHFYEK-RRFRLHSF 146 (247)
Q Consensus 115 ~~g~~~i~l~v~~~N~~a~~fy~k-~GF~~~g~ 146 (247)
..++..+.+.|.. =.+|..||+. +||+....
T Consensus 15 ~~~i~hv~l~v~D-l~~a~~FY~~vLG~~~~~~ 46 (150)
T TIGR00068 15 KRRLLHTMLRVGD-LDKSLDFYTEVLGMKLLRK 46 (150)
T ss_pred CceEEEEEEEecC-HHHHHHHHHHhcCCEEEEE
Confidence 5667777776543 4688999986 89998654
No 161
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=26.90 E-value=2.7e+02 Score=21.91 Aligned_cols=46 Identities=7% Similarity=0.156 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhhhccCCccEEEEEE-----------EcCCHHHHHHHHhCCCEEeeee
Q psy16746 99 ASLLLDNLISHLTTAENSSCKAIFLHV-----------LTSNKPAIHFYEKRRFRLHSFL 147 (247)
Q Consensus 99 G~~Ll~~l~~~a~~~~~~g~~~i~l~v-----------~~~N~~a~~fy~k~GF~~~g~~ 147 (247)
+....+.+.+.+. ++|++.+.+.+ -+..+.|++-..+.|++.....
T Consensus 74 Aq~aa~~~a~k~~---~~Gi~~v~V~vr~~gg~~~kg~GpGr~~airaL~~~glkI~~I~ 130 (149)
T PTZ00129 74 AMMAAQDVAARCK---ELGINALHIKLRATGGVRTKTPGPGAQAALRALARAGLKIGRIE 130 (149)
T ss_pred HHHHHHHHHHHHH---HcCCeEEEEEEEecCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 3444555666666 89999999998 3667899999999999987653
No 162
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=25.28 E-value=88 Score=26.69 Aligned_cols=45 Identities=20% Similarity=0.300 Sum_probs=37.9
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEc
Q psy16746 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT 127 (247)
Q Consensus 81 ~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~ 127 (247)
..|+.+.-+-|.|-.+|++++.|++..+++. .++|-+.|+++..+
T Consensus 143 LtYlgs~r~vPnYNvMGvAKAaLEasvRyLA--~dlG~~gIRVNaIS 187 (259)
T COG0623 143 LTYLGSERVVPNYNVMGVAKAALEASVRYLA--ADLGKEGIRVNAIS 187 (259)
T ss_pred EEeccceeecCCCchhHHHHHHHHHHHHHHH--HHhCccCeEEeeec
Confidence 4566667799999999999999999999987 68899988886543
No 163
>COG2348 Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]
Probab=24.75 E-value=4.2e+02 Score=24.60 Aligned_cols=57 Identities=12% Similarity=0.149 Sum_probs=43.5
Q ss_pred ccccCCHHHHHHHHHHHHHhhhccCCccEEEEEE---------------EcCCHHHHHHHHhCCCEEeeeeccee
Q psy16746 92 DYRRNGIASLLLDNLISHLTTAENSSCKAIFLHV---------------LTSNKPAIHFYEKRRFRLHSFLPYYY 151 (247)
Q Consensus 92 ~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v---------------~~~N~~a~~fy~k~GF~~~g~~~~~~ 151 (247)
+|-++.+-..++..+.+.+. ...+-.|.+.. ...|.+.+..+..+|++..|....+-
T Consensus 78 dy~~~~l~~~~~k~l~~y~k---~~~~l~i~idP~l~~~~~~~~~~~~~~~~n~~~i~~l~~lG~k~~g~t~~~~ 149 (418)
T COG2348 78 DYSNQELLDYFIKELKKYAK---SKRALFIKIDPYLVYQQFDLGGEIIENYNNLAIIKLLKDLGYKHSGFTKGLD 149 (418)
T ss_pred cccchHHHHHHHHHHHHHHh---hccceEEEeccchhhhcccCCCccccCcchHHHHHHHHHhhhhhcCcccccC
Confidence 88999999999999999998 55554443321 14578889999999999988766553
No 164
>cd04263 DUF619-NAGK-FABP DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway. DUF619-NAGK-FABP: DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (FABP). The nuclear-encoded, mitochondrial polyprotein precursor (ARG5,6) consists of an N-terminal NAGK (ArgB) domain, a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved into two distinct enzymes (NAGK-DUF619 and NAGPR) in the mitochondria. Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. Arg5,6 catalyzes the second reaction of arginine biosynthesis; the phosphorylation of the gamma-carboxyl group of NAG to produce N-acetylglutamylphosphate (NAGP) which is subsequently converted to ornithine in two more steps. It also binds and regulates the promoters of nuclear and mitochondrial genes, and may possibly regu
Probab=24.73 E-value=2.8e+02 Score=20.12 Aligned_cols=44 Identities=11% Similarity=0.169 Sum_probs=35.9
Q ss_pred CcEEEEEEEEeCcccccCCHHHHHHHHHHHHHhhhccCCccEEEEEEEcCCH
Q psy16746 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNK 130 (247)
Q Consensus 79 ~~~~~I~~l~V~p~~rg~GiG~~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~ 130 (247)
+.+.++..+.|..+-++.|++..+.+.+.+. + ..+.-.+++.|+
T Consensus 31 ~~vp~LdkF~vs~~~~l~~vaD~Vf~~i~~d-~-------p~L~W~~r~~n~ 74 (98)
T cd04263 31 GEVATLATFTITKSGWLNNVADNIFTAIKKD-H-------PKLVWTVREDDE 74 (98)
T ss_pred CCCEEEEEEEEccccccccHHHHHHHHHHhh-C-------CeeEEEeCCCCC
Confidence 5789999999999999999999999988874 2 366666777665
No 165
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=23.99 E-value=1e+02 Score=21.84 Aligned_cols=28 Identities=21% Similarity=0.169 Sum_probs=19.7
Q ss_pred ccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 118 CKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 118 ~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
+..+.+.|.. =.+|.+||+.+||+....
T Consensus 3 i~hv~l~v~d-~~~s~~FY~~lG~~~~~~ 30 (112)
T cd08344 3 IDHFALEVPD-LEVARRFYEAFGLDVREE 30 (112)
T ss_pred eeEEEEecCC-HHHHHHHHHHhCCcEEee
Confidence 4455554432 378899999999998654
No 166
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=23.68 E-value=1e+02 Score=21.84 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=19.8
Q ss_pred ccEEEEEEEcCCHHHHHHHHh-CCCEEeeee
Q psy16746 118 CKAIFLHVLTSNKPAIHFYEK-RRFRLHSFL 147 (247)
Q Consensus 118 ~~~i~l~v~~~N~~a~~fy~k-~GF~~~g~~ 147 (247)
+..+.+.|.. =.+|..||++ +||+.....
T Consensus 2 i~hv~l~v~d-~~~a~~FY~~~lG~~~~~~~ 31 (126)
T cd08346 2 LHHVTLITRD-AQETVDFYTDVLGLRLVKKT 31 (126)
T ss_pred cccEEEEcCC-hhHhHHHHHHccCCEEeeeE
Confidence 4556564432 3688999987 799987654
No 167
>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A ....
Probab=23.19 E-value=1.1e+02 Score=21.16 Aligned_cols=23 Identities=30% Similarity=0.376 Sum_probs=18.4
Q ss_pred HHHHHHHHh-CCCEEeeeecceec
Q psy16746 130 KPAIHFYEK-RRFRLHSFLPYYYS 152 (247)
Q Consensus 130 ~~a~~fy~k-~GF~~~g~~~~~~~ 152 (247)
..|.+||++ +||+.....+.+..
T Consensus 7 ~~a~~FY~~~lg~~~~~~~~~~~~ 30 (108)
T PF12681_consen 7 EAAAAFYEDVLGFEVVFDDPDYVD 30 (108)
T ss_dssp HHHHHHHHHTTTSEEEEEETSEEE
T ss_pred HHHHHHHHHhcCCEEEEeCCCeEE
Confidence 678999998 89999986665543
No 168
>COG5151 SSL1 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]
Probab=22.06 E-value=43 Score=29.56 Aligned_cols=65 Identities=22% Similarity=0.210 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCcchhHH-HHHHHHHhhhhhccccccCCcchhhhhh--------hhhhccCCCCCCCcchhhhhccCCc
Q psy16746 162 TYVLYINGGHAAWSLCDY-VKHWCESLYSKEFLSKKKGIRNWLVCIK--------YLKCQDWFPIDYPLSWYKDITSEPS 232 (247)
Q Consensus 162 ~m~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~w~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
.++..|+-.-|-+++... ..|++...- ..=-|.+|.-... =|+||-.||+. |-+-|++.+|.|+
T Consensus 316 tkVCsLPi~CP~Csl~LilsthLarSyh------hL~PLk~f~E~p~~~~~ks~~Cf~CQ~~fp~~-~~~~~~~~~ss~r 388 (421)
T COG5151 316 TKVCSLPISCPICSLQLILSTHLARSYH------HLYPLKPFVEKPEGTNPKSTHCFVCQGPFPKP-PVSPFDESTSSGR 388 (421)
T ss_pred ceeecCCccCcchhHHHHHHHHHHHHHH------hhccCcccccccCCCCCCCccceeccCCCCCC-CCCcccccccccc
Confidence 466666666666665544 355555332 2222334432221 47899999987 8899999999988
Q ss_pred e
Q psy16746 233 F 233 (247)
Q Consensus 233 ~ 233 (247)
|
T Consensus 389 Y 389 (421)
T COG5151 389 Y 389 (421)
T ss_pred e
Confidence 6
No 169
>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge
Probab=21.86 E-value=1.4e+02 Score=21.05 Aligned_cols=33 Identities=15% Similarity=0.061 Sum_probs=22.8
Q ss_pred CccEEEEEEEcCCHHHHHHHHh-CCCEEeeeecce
Q psy16746 117 SCKAIFLHVLTSNKPAIHFYEK-RRFRLHSFLPYY 150 (247)
Q Consensus 117 g~~~i~l~v~~~N~~a~~fy~k-~GF~~~g~~~~~ 150 (247)
++..+.+.+. +=.++.+||++ +||+.......+
T Consensus 3 ~i~hv~l~v~-d~~~s~~FY~~~lG~~~~~~~~~~ 36 (120)
T cd08362 3 ALRGVGLGVP-DLAAAAAFYREVWGLSVVAEDDGI 36 (120)
T ss_pred eeeEEEEecC-CHHHHHHHHHhCcCcEEEEecCCE
Confidence 4556666553 23789999998 799987654443
No 170
>PF14268 YoaP: YoaP-like
Probab=21.47 E-value=83 Score=19.27 Aligned_cols=13 Identities=38% Similarity=0.368 Sum_probs=9.9
Q ss_pred eeeeeeeecceee
Q psy16746 233 FYSLAALRNFFFI 245 (247)
Q Consensus 233 ~~~~~~~~~~~~~ 245 (247)
|.+.|.+|||.++
T Consensus 20 ft~yalFYnGkfi 32 (44)
T PF14268_consen 20 FTTYALFYNGKFI 32 (44)
T ss_pred eeEEEEEECCEEE
Confidence 6777888888775
No 171
>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.
Probab=20.73 E-value=1e+02 Score=21.66 Aligned_cols=16 Identities=19% Similarity=0.304 Sum_probs=13.6
Q ss_pred HHHHHHHHh-CCCEEee
Q psy16746 130 KPAIHFYEK-RRFRLHS 145 (247)
Q Consensus 130 ~~a~~fy~k-~GF~~~g 145 (247)
..|.+||++ +||+...
T Consensus 12 ~~s~~FY~~~lG~~~~~ 28 (112)
T cd07238 12 EAAAAFYADVLGLDVVM 28 (112)
T ss_pred HHHHHHHHHhcCceEEE
Confidence 678999998 9999764
No 172
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=20.69 E-value=1.4e+02 Score=22.03 Aligned_cols=43 Identities=12% Similarity=0.114 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhhccCCccEEEEEEEcCCHHHHHHHHhCCCEEeee
Q psy16746 101 LLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146 (247)
Q Consensus 101 ~Ll~~l~~~a~~~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~g~ 146 (247)
..+..+++.+. +.|++.+.+.....+..+.++-++.|.+..|-
T Consensus 66 ~~~~~~v~~~~---~~g~~~v~~~~g~~~~~~~~~a~~~gi~vigp 108 (116)
T PF13380_consen 66 DKVPEIVDEAA---ALGVKAVWLQPGAESEELIEAAREAGIRVIGP 108 (116)
T ss_dssp HHHHHHHHHHH---HHT-SEEEE-TTS--HHHHHHHHHTT-EEEES
T ss_pred HHHHHHHHHHH---HcCCCEEEEEcchHHHHHHHHHHHcCCEEEeC
Confidence 34455566665 78999999888888999999999999998863
No 173
>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=20.64 E-value=1.7e+02 Score=20.80 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=20.2
Q ss_pred EEEEEEEcCC-HHHHHHHHhC-CCEEeeeec
Q psy16746 120 AIFLHVLTSN-KPAIHFYEKR-RFRLHSFLP 148 (247)
Q Consensus 120 ~i~l~v~~~N-~~a~~fy~k~-GF~~~g~~~ 148 (247)
++.+.+...| .+|.+||++. ||+.....+
T Consensus 2 ~~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~ 32 (120)
T cd07254 2 RFHVALNVDDLEASIAFYSKLFGVEPTKVRD 32 (120)
T ss_pred cEEEEEEeCCHHHHHHHHHHHhCCeEecccC
Confidence 3455555555 7899999885 998766544
No 174
>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=20.58 E-value=1.3e+02 Score=21.14 Aligned_cols=31 Identities=16% Similarity=0.326 Sum_probs=22.2
Q ss_pred CccEEEEEEEcCCHHHHHHHHh-CCCEEeeeec
Q psy16746 117 SCKAIFLHVLTSNKPAIHFYEK-RRFRLHSFLP 148 (247)
Q Consensus 117 g~~~i~l~v~~~N~~a~~fy~k-~GF~~~g~~~ 148 (247)
++..+.+.| ++=.++.+||++ +||+......
T Consensus 3 ~l~hi~l~v-~d~~~s~~Fy~~~lG~~~~~~~~ 34 (125)
T cd07253 3 RIDHVVLTV-ADIEATLDFYTRVLGMEVVRFGE 34 (125)
T ss_pred ccceEEEEe-cCHHHHHHHHHHHhCceeecccc
Confidence 455666655 334788999999 8999876543
No 175
>PF06514 PsbU: Photosystem II 12 kDa extrinsic protein (PsbU); InterPro: IPR010527 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. In PSII, the oxygen-evolving complex (OEC) is responsible for catalysing the splitting of water to O(2) and 4H+. The OEC is composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ), PsbU and PsbV having been lost during the evolution of green plants []. This family represents the PSII extrinsic protein PsbU, which forms part of the OEC in cyanobacteria and red algae. PsbU acts to stabilise the oxygen-evolving machinery of PSII against heat-induced inactivation, which is crucial for cellular thermo-tolerance [].; GO: 0015979 photosynthesis, 0042549 photosystem II stabilization, 0009523 photosystem II, 0009654 oxygen evolving complex, 0019898 extrinsic to membrane; PDB: 3BZ1_U 3KZI_U 3PRQ_U 2AXT_u 3BZ2_U 4FBY_U 3PRR_U 1S5L_U 3A0H_U 3ARC_U ....
Probab=20.53 E-value=50 Score=23.72 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=11.8
Q ss_pred cCCCCCCCcchhhhhccCCceeee
Q psy16746 213 DWFPIDYPLSWYKDITSEPSFYSL 236 (247)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~ 236 (247)
.-||+|||..= .-|.+++-|-|+
T Consensus 26 ~~~pGmYPtlA-~kIv~naPY~sv 48 (93)
T PF06514_consen 26 RQFPGMYPTLA-GKIVSNAPYKSV 48 (93)
T ss_dssp CCSTTTTCCHH-HHHHHS---SSG
T ss_pred HHCCCCCHHHH-HHHHhCCCCCCH
Confidence 45899999752 233344444443
No 176
>TIGR03645 glyox_marine lactoylglutathione lyase family protein. Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.
Probab=20.37 E-value=1.2e+02 Score=23.61 Aligned_cols=29 Identities=21% Similarity=0.244 Sum_probs=21.1
Q ss_pred CCccEEEEEEEcCCHHHHHHHHh-CCCEEee
Q psy16746 116 SSCKAIFLHVLTSNKPAIHFYEK-RRFRLHS 145 (247)
Q Consensus 116 ~g~~~i~l~v~~~N~~a~~fy~k-~GF~~~g 145 (247)
+++..+.+.|.. =.+|+.||++ +||+...
T Consensus 3 ~~i~Hv~i~V~D-le~s~~FY~~~LG~~~~~ 32 (162)
T TIGR03645 3 RTFSHIGISVPD-LDAAVKFYTEVLGWYLIM 32 (162)
T ss_pred ceEEEEEEEeCC-HHHHHHHHHHhcCCEEEe
Confidence 456677775543 4789999987 8998753
Done!