RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16746
(247 letters)
>2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics
consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB:
2psw_A* 3tfy_A*
Length = 170
Score = 108 bits (273), Expect = 6e-30
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 20/153 (13%)
Query: 23 NYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVG 82
+Y +YKD+ LA +N + +G + + ++ +
Sbjct: 31 SYNDKFYKDVLEVGELAKLAY-FNDIAVGAVCCRV----------------DHSQNQKRL 73
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
YI++LG YRR GI + +L+++++ ++ + I+LHV SN+ AI FY K F
Sbjct: 74 YIMTLGCLAPYRRLGIGTKMLNHVLNIC--EKDGTFDNIYLHVQISNESAIDFYRKFGFE 131
Query: 143 LHSFLPYYYSIKGRSRDGFTYVLYINGGHAAWS 175
+ YY + D + +
Sbjct: 132 IIETKKNYYK-RIEPADAHVLQKNLKVPSGQNA 163
Score = 29.6 bits (67), Expect = 0.61
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 211 CQDWFPIDYPLSWYKDITSEPSFYSLAA 238
Q FP+ Y +YKD+ LA
Sbjct: 24 NQVIFPVSYNDKFYKDVLEVGELAKLAY 51
>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus
solfataricus}
Length = 168
Score = 90.9 bits (226), Expect = 5e-23
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 21 SGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIE 80
NYP ++ + E A+ + ++G I+ I E +
Sbjct: 35 PENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRI--------EWGFSNIKQLPSLVR 86
Query: 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRR 140
G+++S+ V E+YRR GIA+ LL+ + + + + + I+L V SN PAI YEK
Sbjct: 87 KGHVVSIAVLEEYRRKGIATTLLEASMKSM--KNDYNAEEIYLEVRVSNYPAIALYEKLN 144
Query: 141 FRLHSFLPYYYS 152
F+ L YY+
Sbjct: 145 FKKVKVLKGYYA 156
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N-
acetyltransferase); eubacterial aminoglyco resistance,
GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A
{Serratia marcescens} SCOP: d.108.1.1
Length = 168
Score = 84.1 bits (208), Expect = 2e-20
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 20/120 (16%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ ++ +F +LAA ++G + A +L F++ YI L
Sbjct: 66 YLGNLLRSKTFIALAAFDQEAVVGALAAYVLP--------------KFEQPRSEIYIYDL 111
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR---LH 144
VS ++RR GIA+ L++ L A I++ + PA+ Y K R +H
Sbjct: 112 AVSGEHRRQGIATALINLLKHE---ANALGAYVIYVQADYGDDPAVALYTKLGIREEVMH 168
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2,
protein STRU initiative, northeast structural genomics
consortium, NESG; 2.61A {Vibrio fischeri}
Length = 166
Score = 77.4 bits (191), Expect = 6e-18
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 14/123 (11%)
Query: 24 YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83
+P A + VIIG I + S+ K + +
Sbjct: 42 EEEKSIARYLDDPECMVYVAEMDDVIIGFITGHFCEL-----------ISTVSKLVMMAT 90
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
I L + ++YRR G+A L+ + ++ K IF+ V NK A+ FY K+
Sbjct: 91 IDELYIEKEYRREGVAEQLMMRIEQE---LKDYGVKEIFVEVWDFNKGALEFYNKQGLNE 147
Query: 144 HSF 146
H
Sbjct: 148 HIH 150
>3pp9_A Putative streptothricin acetyltransferase; toxin production
resistance, infectious diseases, structural genomics;
HET: MSE ACO; 1.60A {Bacillus anthracis}
Length = 187
Score = 76.1 bits (187), Expect = 3e-17
Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 22/136 (16%)
Query: 24 YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83
Y + ++P+ AL + IIG IV + Y
Sbjct: 62 NEELVYNEYINKPNQIIYIALLHNQIIGFIVLKKNWN-------------------NYAY 102
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
I + V + YR G+ L+ A+ + I L +N A FYEK F +
Sbjct: 103 IEDITVDKKYRTLGVGKRLIAQAKQW---AKEGNMPGIMLETQNNNVAACKFYEKCGFVI 159
Query: 144 HSFLPYYYSIKGRSRD 159
F Y + D
Sbjct: 160 GGFDFLVYKGLNMTSD 175
>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus
horikoshii OT3, riken struct genomics/proteomics
initiative, RSGI; HET: ACO; 1.75A {Pyrococcus
horikoshii} SCOP: d.108.1.1
Length = 159
Score = 75.2 bits (185), Expect = 4e-17
Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 17/131 (12%)
Query: 23 NYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVG 82
+Y ++ K + S A I+G IV D S + VG
Sbjct: 40 DYARNYIKWCWKKASDGFFVAKVGDKIVGFIVC-------------DKDWFSKYEGRIVG 86
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
I V + ++ GI LL + L I L V N A++ YEK F+
Sbjct: 87 AIHEFVVDKKFQGKGIGRKLLITCLDFL----GKYNDTIELWVGEKNYGAMNLYEKFGFK 142
Query: 143 LHSFLPYYYSI 153
+ +
Sbjct: 143 KVGKSGIWVRM 153
>3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A
{Streptococcus mutans}
Length = 197
Score = 76.0 bits (187), Expect = 4e-17
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 35 EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYR 94
E + + L A I+G V + +HI + V+E R
Sbjct: 78 ESNTHFLVAKIKDKIVG--VLDYSSLYPFPSG----------QHI---VTFGIAVAEKER 122
Query: 95 RNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIK 154
R GI L+ ++ ++ + + +HVL+SN+ A+ FY+K F L + L + +K
Sbjct: 123 RKGIGRALVQIFLNE---VKSD-YQKVLIHVLSSNQEAVLFYKKLGFDLEARLTKQFFLK 178
Query: 155 GRSRDGFTYVLYINGGHA 172
G+ D Y + +A
Sbjct: 179 GQYVDDLIYSYDLEAAYA 196
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural
genomics, PSI-2, prote structure initiative; HET: MSE;
2.00A {Shigella flexneri 2A}
Length = 144
Score = 70.9 bits (174), Expect = 1e-15
Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 23/131 (17%)
Query: 23 NYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVG 82
N P + + L A NG ++G ++ +D H G
Sbjct: 31 NDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMG------------------GYDGH--RG 70
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
LGV ++R GIA+ LL+ L L C I ++V N + YE+ +
Sbjct: 71 SAYYLGVHPEFRGRGIANALLNRLEKKLIARG---CPKIQINVPEDNDMVLGMYERLGYE 127
Query: 143 LHSFLPYYYSI 153
L +
Sbjct: 128 HADVLSLGKRL 138
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside
ribostamycin; HET: COA RIO; 2.00A {Salmonella
enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A*
2vbq_A*
Length = 165
Score = 70.6 bits (173), Expect = 2e-15
Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 14/117 (11%)
Query: 34 SEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDY 93
S A+ +GV IG A I + V ++ + V +
Sbjct: 59 QADHLASFIAMADGVAIGFADASIRHDYV-----------NGCDSSPVVFLEGIFVLPSF 107
Query: 94 RRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYY 150
R+ G+A L+ + N C+ + N + ++ F + +Y
Sbjct: 108 RQRGVAKQLIAAVQRW---GTNKGCREMASDTSPENTISQKVHQALGFEETERVIFY 161
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure
initiati northeast structural genomics consortium, NESG,
transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Length = 164
Score = 69.3 bits (170), Expect = 6e-15
Identities = 25/116 (21%), Positives = 36/116 (31%), Gaps = 13/116 (11%)
Query: 30 KDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGV 89
+ E S + I V ++Q + + YI L V
Sbjct: 47 AAVQGEKSTVLVFVDEREKIGAYSVIHLVQTPL----------LPTMQQRKTVYISDLCV 96
Query: 90 SEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145
E R GI L+ + +IS+ + AI L V N A FY R
Sbjct: 97 DETRRGGGIGRLIFEAIISY---GKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQK 149
>1on0_A YYCN protein; structural genomics, alpha-beta protein with
anti-parallel B strands, PSI, protein structure
initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1
Length = 158
Score = 68.7 bits (168), Expect = 9e-15
Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 19/113 (16%)
Query: 30 KDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGV 89
+ + + L I+G + + + +I G+
Sbjct: 53 RGLETPHHHLWSLKLNEKDIVGWLWIHAEP----------------EHPQQEAFIYDFGL 96
Query: 90 SEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
E YR G A L L A + + + LHV N+ A YE+ F+
Sbjct: 97 YEPYRGKGYAKQALAALDQA---ARSMGIRKLSLHVFAHNQTARKLYEQTGFQ 146
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase
(GNAT), alpha-beta, structu genomics, PSI, protein
structure initiative; HET: GOL; 2.19A {Enterococcus
faecalis} SCOP: d.108.1.1
Length = 166
Score = 68.5 bits (168), Expect = 1e-14
Identities = 37/161 (22%), Positives = 55/161 (34%), Gaps = 20/161 (12%)
Query: 8 YQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKED 67
Q + PLS A+ + G I
Sbjct: 25 DQIIWTKKNTPAEI--QPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPP--------- 73
Query: 68 KDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT 127
+S H + +LS+GVS D++ GI LL + AE S + L V+
Sbjct: 74 -----TSLAAHQKQW-LLSIGVSPDFQDQGIGGSLLSYIKDM---AEISGIHKLSLRVMA 124
Query: 128 SNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYIN 168
+N+ AI FYEK F + + I G D + Y +I
Sbjct: 125 TNQEAIRFYEKHGFVQEAHFKEEFYINGHYCDDYQYAYFIE 165
>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative
acetyltransferase of the GNAT family; 1.85A
{Desulfovibrio desulfuricans subsp}
Length = 177
Score = 68.7 bits (168), Expect = 1e-14
Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 22/121 (18%)
Query: 34 SEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDY 93
+ ++ + A + + G T + + V+
Sbjct: 64 AACGYHFVFATEDDDMAGYACYGPTPATE-----------------GTYDLYWIAVAPHR 106
Query: 94 RRNGIASLLLDNLISHLTTAENSSCKAIFLHV--LTSNKPAIHFYEKRRFRLHSFLPYYY 151
+ +G+ LL ++ + + +F + P FYE+ F + L +Y
Sbjct: 107 QHSGLGRALLAEVVHD---VRLTGGRLLFAETSGIRKYAPTRRFYERAGFSAEAVLKAFY 163
Query: 152 S 152
Sbjct: 164 R 164
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase,
staphylococcus epidermidis ATCC structural genomics;
HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc
12228}
Length = 169
Score = 68.7 bits (168), Expect = 1e-14
Identities = 18/162 (11%), Positives = 47/162 (29%), Gaps = 22/162 (13%)
Query: 9 QANVLTSTSLRHSGNYPLSWYKDITSEPS--FYSLAALYNGVIIGLIVAEILQYTSLNKE 66
+ + N + K I S + + A + ++ + + Y
Sbjct: 24 FGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGK--- 80
Query: 67 DKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVL 126
H + + V + L++++I + A+ + + + + +
Sbjct: 81 ----------CHK--AILENNFV--KNNDEIVNRELINHIIQY---AKEQNIETLMIAIA 123
Query: 127 TSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYIN 168
++N A F+ F +F I D +
Sbjct: 124 SNNISAKVFFSSIGFENLAFEKNASKIGNEYFDENWLIYSTT 165
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural
genomics, PSI, protein structure initiative; 1.70A
{Bacillus subtilis} SCOP: d.108.1.1
Length = 157
Score = 68.2 bits (167), Expect = 1e-14
Identities = 20/120 (16%), Positives = 33/120 (27%), Gaps = 20/120 (16%)
Query: 24 YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83
+ S + + G ++ Q E Y
Sbjct: 28 LKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQ-----------------SDPETAY 70
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
I GV D+R+ I L D I + C + NK +I ++ K F +
Sbjct: 71 IHFSGVHPDFRKMQIGKQLYDVFIET---VKQRGCTRVKCVTSPVNKVSIAYHTKLGFDI 127
>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur
genomics, PSI-2, protein structure initiative; HET: ACO;
2.10A {Streptococcus pneumoniae}
Length = 172
Score = 68.2 bits (167), Expect = 2e-14
Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 24/140 (17%)
Query: 9 QANVLTSTSLRHSGNYPLS------WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTS 62
+ ++ T + L+ + S + +L A NG I G++ Q
Sbjct: 24 RVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKR 83
Query: 63 LNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIF 122
+ +H +G + + + + Y NG+ SLLL+ I + + +
Sbjct: 84 V-------------RH--IGDL-FIVIGKRYWNNGLGSLLLEEAIEWA--QASGILRRLQ 125
Query: 123 LHVLTSNKPAIHFYEKRRFR 142
L V T N+ A+H Y+K F
Sbjct: 126 LTVQTRNQAAVHLYQKHGFV 145
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette
protein, mobIle metagenome, structural genomics, PSI-2;
1.45A {Uncultured bacterium}
Length = 176
Score = 67.4 bits (165), Expect = 3e-14
Identities = 13/133 (9%), Positives = 33/133 (24%), Gaps = 17/133 (12%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ + +G IV + G++
Sbjct: 61 FKALLGKPDLGRIWLIAEGTESVGYIVLTLGFSMEYGGL--------------RGFVDDF 106
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147
V + R G+ + L + + +A+ + + PA Y + F +
Sbjct: 107 FVRPNARGKGLGAAALQTVKQG---CCDLGVRALLVETGPEDHPARGVYSRAGFEESGRM 163
Query: 148 PYYYSIKGRSRDG 160
++ +
Sbjct: 164 LLGQALAPPIHEA 176
>1y9k_A IAA acetyltransferase; structural genomics, midwest center for
structural genomics bacillus cereus ATCC 14579, PSI;
2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1
Length = 157
Score = 67.0 bits (164), Expect = 3e-14
Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 22/112 (19%)
Query: 41 LAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIAS 100
A G +IG+ V L + I+++ V+E + GI
Sbjct: 40 YVAKQGGSVIGVYV--------LLETRPK-----------TMEIMNIAVAEHLQGKGIGK 80
Query: 101 LLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYS 152
LL + + A+ + + S+ + Y+K FR+ S Y+S
Sbjct: 81 KLLRHAVET---AKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSIDFDYFS 129
>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure
initiative, midwest center for struc genomics, MCSG;
HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP:
d.108.1.1
Length = 170
Score = 67.4 bits (165), Expect = 4e-14
Identities = 27/141 (19%), Positives = 41/141 (29%), Gaps = 20/141 (14%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ D+ A+ +G +IG + H G + +
Sbjct: 49 FVLDMIENDHPQ-FVAIADGDVIGWCDIRRQDRATR-------------AH--CGTL-GM 91
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147
G+ YR G+ + L+ + A I L V N AI YEK F
Sbjct: 92 GILPAYRNKGLGARLMRRTLDA---AHEFGLHRIELSVHADNARAIALYEKIGFAHEGRA 148
Query: 148 PYYYSIKGRSRDGFTYVLYIN 168
SI G D +
Sbjct: 149 RDAVSIDGHYIDSLNMAIIFG 169
>2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase
(GNAT) family, structural genomics, joint center for ST
genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134}
Length = 153
Score = 66.7 bits (163), Expect = 5e-14
Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 15/116 (12%)
Query: 27 SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS 86
W ++ S++ G + I ++++ S + GYIL+
Sbjct: 42 DWLLPRLADGSYFGWVMEEGGAPLAGIGLMVIEWPP---------HPSHPLQDKRGYILN 92
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
L V +R GI L++ + VL + + Y + +
Sbjct: 93 LYVDPSHRERGIGQALMNRAEAE---FAERGIAFA---VLHATEMGQPLYARMGWS 142
>2i6c_A Putative acetyltransferase; GNAT family, structural genomic,
structur genomics, PSI-2, protein structure initiative;
HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP:
d.108.1.1 PDB: 3pgp_A*
Length = 160
Score = 66.7 bits (163), Expect = 5e-14
Identities = 15/131 (11%), Positives = 44/131 (33%), Gaps = 23/131 (17%)
Query: 24 YPLS--WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEV 81
+P S +E A+++G ++G + + +H +
Sbjct: 35 WPFSVAQLAAAIAERRGS-TVAVHDGQVLG--------FANF----------YQWQHGDF 75
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
+ ++ V+ R G+A L+ + + E + + + +N + Y + +
Sbjct: 76 CALGNMMVAPAARGLGVARYLIGVMENLA--REQYKARLMKISCFNANAAGLLLYTQLGY 133
Query: 142 RLHSFLPYYYS 152
+ + +
Sbjct: 134 QPRAIAERHDP 144
>1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural
genomics, PSI, protein structure initiative; 2.20A
{Bacillus subtilis subsp} SCOP: d.108.1.1
Length = 180
Score = 67.2 bits (164), Expect = 6e-14
Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 19/109 (17%)
Query: 30 KDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGV 89
+ + + L I+G + + + +I G+
Sbjct: 77 RGLETPHHHLWSLKLNEKDIVGWLWIHA----------------EPEHPQQEAFIYDFGL 120
Query: 90 SEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
E YR G A L L A + + + LHV N+ A YE+
Sbjct: 121 YEPYRGKGYAKQALAALDQA---ARSMGIRKLSLHVFAHNQTARKLYEQ 166
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein
structure initiative, no structural genomics consortium,
NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Length = 157
Score = 66.3 bits (162), Expect = 6e-14
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 16/117 (13%)
Query: 26 LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYIL 85
++ + + A N II + + + +K GYI
Sbjct: 39 TRYFNNKLANNLLVEWIAEENNQIIATAAIAFIDF----------PPTYTNKTGRKGYIT 88
Query: 86 SLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
++ R NGIA+ +LD L++ A+ + I L ++K Y+K F+
Sbjct: 89 NMYTEPTSRGNGIATGMLDRLVNE---AKERNIHKI---CLVASKLGRPVYKKYGFQ 139
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold,
structural genomics, PSI, P structure initiative; 2.00A
{Bacillus halodurans} SCOP: d.108.1.1
Length = 153
Score = 65.6 bits (160), Expect = 1e-13
Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 19/138 (13%)
Query: 8 YQANVLTSTSLRHSGNYPLS---WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLN 64
+VL R+ P+S +K+I + + + A I+G++ Y +
Sbjct: 22 LADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQ 81
Query: 65 KEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLH 124
I + R GI S L+ I A+ C I L
Sbjct: 82 GSW-------------RATIEGVRTHSAARGQGIGSQLVCWAIER---AKERGCHLIQLT 125
Query: 125 VLTSNKPAIHFYEKRRFR 142
A+ FYE+ F+
Sbjct: 126 TDKQRPDALRFYEQLGFK 143
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for
structural genomics of infectious diseases (csgid
national institute of allergy and infectious diseases;
HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A
4e8o_A
Length = 166
Score = 66.0 bits (161), Expect = 1e-13
Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 14/126 (11%)
Query: 26 LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYIL 85
L + +E L A + I ++ A I + + VG++
Sbjct: 51 LQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRFEYV-----------NGTETSPVGFLE 99
Query: 86 SLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145
+ V +RR+G+A++L+ A+ SC N + + F+
Sbjct: 100 GIYVLPAHRRSGVATMLIRQAEVW---AKQFSCTEFASDAALDNVISHAMHRSLGFQETE 156
Query: 146 FLPYYY 151
+ Y+
Sbjct: 157 KVVYFS 162
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha
acetylation, GCN5-N-acetyltransferase, ribosomal Pro
acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella
typhimurium} PDB: 2cnm_A* 2cns_A*
Length = 160
Score = 65.4 bits (160), Expect = 1e-13
Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 23/130 (17%)
Query: 39 YSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGI 98
+L + + + +++ ++ + ++ V D++R G+
Sbjct: 41 LNLKLTADDRMAAFAITQVV--------------------LDEATLFNIAVDPDFQRRGL 80
Query: 99 ASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSR 158
+LL++LI E ++L V SN AI YE F + YY
Sbjct: 81 GRMLLEHLIDE---LETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQGHE 137
Query: 159 DGFTYVLYIN 168
D L I+
Sbjct: 138 DAIIMALPIS 147
>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp}
SCOP: d.108.1.1
Length = 159
Score = 64.8 bits (158), Expect = 2e-13
Identities = 19/119 (15%), Positives = 33/119 (27%), Gaps = 21/119 (17%)
Query: 27 SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS 86
+ G +I I F + I
Sbjct: 54 EMICSRLEHTNDKIYIYENEGQLIAFIWG------------------HFSNEKSMVNIEL 95
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145
L V +R+ GIA+ L L A+ + K I + +N P I + +++
Sbjct: 96 LYVEPQFRKLGIATQLKIALEKW---AKTMNAKRISNTIHKNNLPMISLNKDLGYQVSH 151
>3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint
center for structural genomics, JCSG, protein structu
initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus
cereus}
Length = 143
Score = 63.9 bits (156), Expect = 4e-13
Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 25/113 (22%)
Query: 39 YSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGI 98
+ + I G + + + + ++ + VS RR G
Sbjct: 41 RCVIVKEDNSISGFLTYDTNFF-------------------DCTFLSLIIVSPTKRRRGY 81
Query: 99 ASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYY 151
AS LL ++SH S + IF SN+ + F +
Sbjct: 82 ASSLLSYMLSH------SPTQKIFSSTNESNESMQKVFNANGFIRSGIVENLD 128
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein
structure initiative; 2.40A {Enterococcus faecalis}
SCOP: d.108.1.1
Length = 199
Score = 64.3 bits (156), Expect = 7e-13
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK--- 138
Y+ ++ V E +R GI S LLD L A+ S +A+ L+V N A Y
Sbjct: 113 WYLDTISVDERFRGMGIGSKLLDALPEV---AKASGKQALGLNVDFDNPGARKLYASKGF 169
Query: 139 -----RRFRLHSFLPYYYSIKGRS 157
H + ++G S
Sbjct: 170 KDVTTMTISGHLYNHMQKEVEGGS 193
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis
aries} SCOP: d.108.1.1 PDB: 1b6b_A
Length = 166
Score = 63.7 bits (155), Expect = 8e-13
Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 9/103 (8%)
Query: 40 SLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIA 99
SL G ++ I+ + L +E + ++ +L V +R+ G
Sbjct: 52 SLGWFVEGRLVAFIIGSLWDEERLTQES----LALHRPRGHSAHLHALAVHRSFRQQGKG 107
Query: 100 SLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
S+LL + H+ + VL + FY++ F
Sbjct: 108 SVLLWRYLHHVGAQPA--VRRA---VLMCEDALVPFYQRFGFH 145
>1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural
genomics, PSI, protein structure initiative; HET: COA;
3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1
Length = 163
Score = 63.2 bits (154), Expect = 9e-13
Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 22/112 (19%)
Query: 41 LAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIAS 100
A + G+ V L K I+++ V E ++ G
Sbjct: 42 YTAWAGDELAGVYV--------LLKTRPQ-----------TVEIVNIAVKESLQKKGFGK 82
Query: 101 LLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYS 152
L+ + I A+ I + S+ + Y+K FR+ + ++
Sbjct: 83 QLVLDAIEK---AKKLGADTIEIGTGNSSIHQLSLYQKCGFRIQAIDHDFFL 131
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus
furiosus southeast collaboratory for structural
genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP:
d.108.1.1
Length = 158
Score = 63.2 bits (154), Expect = 1e-12
Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 32 ITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSE 91
++ + +A ++G + I ++++ YI + V +
Sbjct: 56 LSQGEHKFFVALNERSELLGHVWICITL--------------DTVDYVKIAYIYDIEVVK 101
Query: 92 DYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147
R GI S LL A+ K I L V N PA+ +YE+R ++ + +
Sbjct: 102 WARGLGIGSALLRKAEEW---AKERGAKKIVLRVEIDN-PAVKWYEERGYKARALI 153
>3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint
center for structural genomics; 1.80A {Novosphingobium
aromaticivorans dsm 12ORGANISM_TAXID}
Length = 228
Score = 64.5 bits (157), Expect = 1e-12
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 79 IEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
+ + + +YR G+A+ L+ +I+ + + + +LH SN AI YE
Sbjct: 155 PNLAEVSGVCTWPEYRGRGLAARLIRKVIAGMA----ARGEVPYLHSYASNASAIRLYES 210
Query: 139 RRFRLHSFLPYYYSIKGRS 157
FR ++ G+S
Sbjct: 211 LGFRARR--AMTATLLGKS 227
>3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family,
structural genomics, PSI, protein structure initiative;
1.41A {Pseudomonas aeruginosa PAO1}
Length = 182
Score = 62.9 bits (153), Expect = 2e-12
Identities = 15/131 (11%), Positives = 42/131 (32%), Gaps = 23/131 (17%)
Query: 24 YPLS--WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEV 81
+P S +E A+++G ++G +H +
Sbjct: 57 WPFSVAQLAAAIAERRGS-TVAVHDGQVLGFANF------------------YQWQHGDF 97
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
+ ++ V+ R G+A L+ + + E + + + +N + Y + +
Sbjct: 98 CALGNMMVAPAARGLGVARYLIGVMENLA--REQYKARLMKISCFNANAAGLLLYTQLGY 155
Query: 142 RLHSFLPYYYS 152
+ + +
Sbjct: 156 QPRAIAERHDP 166
>1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor
complex, bisubstrate analog, alternate conformations;
HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB:
1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E*
Length = 207
Score = 63.5 bits (154), Expect = 2e-12
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 39 YSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGI 98
SL G ++ I+ + L +E + ++ +L V +R+ G
Sbjct: 80 LSLGWFVEGRLVAFIIGSLWDEERLTQES----LALHRPRGHSAHLHALAVHRSFRQQGK 135
Query: 99 ASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
S+LL + H+ + VL + FY++ F
Sbjct: 136 GSVLLWRYLHHVGAQPA--VRRA---VLMCEDALVPFYQRFGFH 174
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI
1; alpha-beta protein, structural genomics, PSI; HET:
COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Length = 180
Score = 62.0 bits (151), Expect = 3e-12
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 27 SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS 86
K++++ S + ++ I G Y +N +D A S + E I
Sbjct: 49 QLEKELSNMSSQF-FFIYFDHEIAG--------YVKVNIDD----AQSEEMGAESLEIER 95
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146
+ + ++++G+ LL+ I A + K I+L V N+ AI FY+K F
Sbjct: 96 IYIKNSFQKHGLGKHLLNKAIEI---ALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGA 152
Query: 147 LPYYY 151
+Y
Sbjct: 153 HSFYM 157
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics,
midwest center for structu genomics, MCSG; HET: PGE;
2.00A {Staphylococcus aureus}
Length = 150
Score = 60.9 bits (148), Expect = 5e-12
Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 19/122 (15%)
Query: 27 SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS 86
K IT+ ++ L + IIGL + + N E IL+
Sbjct: 40 KRLKKITNHDDYFLLLLIKENKIIGLSGMCKMMFYEKNAE--------------YMRILA 85
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT--SNKPAIHFYEKRRFRLH 144
+ ++R+ G LL + ++ +CKAI L+ A Y + +
Sbjct: 86 FVIHSEFRKKGYGKRLLADSEEF---SKRLNCKAITLNSGNRNERLSAHKLYSDNGYVSN 142
Query: 145 SF 146
+
Sbjct: 143 TS 144
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein
structure initiative, midwest CENT structural genomics,
MCSG; HET: MSE; 1.48A {Clostridium difficile}
Length = 157
Score = 61.0 bits (148), Expect = 7e-12
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 16/115 (13%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ E ++ I+ N +I S+
Sbjct: 45 VKALLLDERKGKYHVYTVFDKVVAQIMYTYEWSDWRNGN--------------FLWIQSV 90
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
V ++YRR GI + L + + + ++ + + L+V N A YE
Sbjct: 91 YVDKEYRRKGIFNYLFNYIKNIC--DKDENIVGMRLYVEKENINAKATYESLNMY 143
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein
struc initiative, midwest center for structural
genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Length = 150
Score = 60.1 bits (146), Expect = 1e-11
Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 16/110 (14%)
Query: 29 YKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLG 88
+ + ++P A NG + I+ + +I ++
Sbjct: 42 FAAMLAQPGLTIFVATENGKPVATATLLIVPNLTRAARP-------------YAFIENVV 88
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
E R G ++ + I A ++C + L + FYE
Sbjct: 89 TLEARRGRGYGRTVVRHAIET---AFGANCYKVMLLTGRHDPAVHAFYES 135
>3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative
acetyltransferase, acetyltransferase family, structural
genomics; 2.00A {Thermoplasma acidophilum dsm 1728}
Length = 266
Score = 60.9 bits (147), Expect = 3e-11
Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 25/128 (19%)
Query: 24 YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83
Y + ++ S Y +G + I E L
Sbjct: 48 YVDKVIERWVNDGSVY--VLRVSGRPVATIHMEKLPD-------------------GSVM 86
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
+ L V +YR + + ++ I L + + V + N+P++ + F
Sbjct: 87 LGGLRVHPEYRGSRLGMSIMQETIQFLRGK----TERLRSAVYSWNEPSLRLVHRLGFHQ 142
Query: 144 HSFLPYYY 151
P Y
Sbjct: 143 VEEYPIYT 150
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative
acetyltransferase, arthrobacter SP. FB acetyltransferase
(GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Length = 172
Score = 58.2 bits (141), Expect = 8e-11
Identities = 21/116 (18%), Positives = 31/116 (26%), Gaps = 22/116 (18%)
Query: 41 LAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIAS 100
+ L GL V V + L V R + + S
Sbjct: 71 VVLLAGEPPTGLAVLSFRPNVWYPGP--------------VAILDELYVRPGRRGHRLGS 116
Query: 101 LLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF-----LPYYY 151
LL + + ++V + A FYE R F + YYY
Sbjct: 117 ALLAASCGL---VRSRGGALLEINVDGEDTDARRFYEARGFTNTEPNGTEPMLYYY 169
>2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase,
hypothetical protein; 2.25A {Pseudomonas aeruginosa}
Length = 177
Score = 58.1 bits (141), Expect = 9e-11
Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 22/134 (16%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHI-EVGYILS 86
D + L AL+ G +IG E H +G
Sbjct: 48 RLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRR-------------SHSGSIGM--- 91
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENS-SCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145
GV+ ++ G+ S LL L+ A+N + + + L V T N PA+ Y K F
Sbjct: 92 -GVAVAWQGKGVGSRLLGELLDI---ADNWMNLRRVELTVYTDNAPALALYRKFGFETEG 147
Query: 146 FLPYYYSIKGRSRD 159
+ Y GR D
Sbjct: 148 EMRDYAVRDGRFVD 161
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI,
protein structure initiative; 2.80A {Pseudomonas
aeruginosa PAO1} SCOP: d.108.1.1
Length = 153
Score = 56.6 bits (137), Expect = 2e-10
Identities = 23/121 (19%), Positives = 36/121 (29%), Gaps = 18/121 (14%)
Query: 35 EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYR 94
E Y A ++G + S V + + V+E+ R
Sbjct: 46 ESVIYLALADEEDRLLGFCQL--------------YPSFSSLSLKRVWILNDIYVAEEAR 91
Query: 95 RNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS-FLPYYYSI 153
R +A LL + A + + + N+ A YE FR F Y I
Sbjct: 92 RQLVADHLLQHAKQM---ARETHAVRMRVSTSVDNEVAQKVYESIGFREDQEFKNYTLPI 148
Query: 154 K 154
Sbjct: 149 S 149
>3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG,
P structural genomics, protein structure initiative;
HET: ACO; 1.80A {Thermus thermophilus}
Length = 160
Score = 56.7 bits (137), Expect = 2e-10
Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 22/115 (19%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ + +P + +G L E +D + L
Sbjct: 52 DLQTLEVDPRRRAFLLFLGQEPVG-----YLDAKLGYPEAEDA------------TLSLL 94
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
+ ED++ G+ L+ + L + ++ V N A F++ + FR
Sbjct: 95 LIREDHQGRGLGRQALERFAAGL-----DGVRRLYAVVYGHNPKAKAFFQAQGFR 144
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET:
COA; 1.84A {Sulfolobus solfataricus P2}
Length = 160
Score = 56.6 bits (137), Expect = 3e-10
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 85 LSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLH 144
SL V +YR GI +LL+ LI A+ S + + L N P I K F++
Sbjct: 77 FSLVVHRNYRTLGIGTLLVKTLIEE---AKKSGLSTVKFYTLPENTPMIKIGRKLGFKMR 133
Query: 145 SFLP-YYYSIKGRSRD 159
+ Y ++ R+
Sbjct: 134 FYEDEVYGEMRLTERE 149
>1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme
A complex, MSHD, TRAN; HET: COA ACO; 1.60A
{Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB:
1ozp_A* 2c27_A*
Length = 318
Score = 57.5 bits (138), Expect = 6e-10
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHL-------TTAENSSCKAIFLHVLTSNKPA 132
+G + LGV +R G+ +L I L T + + A+ L+V + N A
Sbjct: 234 GLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAA 293
Query: 133 IHFYEKRRFRLHSFLPYYY 151
+ Y+ F +S Y
Sbjct: 294 VRTYQSLGFTTYSVDTAYA 312
Score = 31.7 bits (71), Expect = 0.18
Identities = 16/134 (11%), Positives = 29/134 (21%), Gaps = 11/134 (8%)
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
G + L V RR GI + + ++ + PA
Sbjct: 78 GAMAELVVHPQSRRRGIGTAMARAALAKTAG-------RNQFWAHGTLDPARATASALGL 130
Query: 142 RLHSFLPYYYSIKGRSRDGFTYVLYINGGHAAWSLCDYVKHWCESLYSKEFLSKKKGIRN 201
L R +G + + F +
Sbjct: 131 VGVRELIQMR----RPLRDIPEPTIPDGVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGW 186
Query: 202 WLVCIKYLKCQDWF 215
V + + + WF
Sbjct: 187 TAVQLAERRGEAWF 200
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2,
protein structure initiative, midwest center for STR
genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB:
3f0a_A* 3k9u_A* 3ne7_A*
Length = 183
Score = 55.9 bits (135), Expect = 7e-10
Identities = 19/114 (16%), Positives = 29/114 (25%), Gaps = 23/114 (20%)
Query: 30 KDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGV 89
S L A + +IG + L +L L +
Sbjct: 79 VRSQSNLDILFLGAFADSTLIG--------FIELKIIANK------------AELLRLYL 118
Query: 90 SEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
+Y I LL + L+V N FY K F++
Sbjct: 119 KPEYTHKKIGKTLLLEAEKI---MKKKGILECRLYVHRQNSVGFSFYYKNGFKV 169
>2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase;
NMR {Escherichia coli}
Length = 147
Score = 54.8 bits (132), Expect = 1e-09
Identities = 13/61 (21%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
++ +L + D R G+ +L+++ +S + +V N+ A+ FY+K F
Sbjct: 71 QHMDALFIDPDVRGCGVGRVLVEHALSM--------APELTTNVNEQNEQAVGFYKKVGF 122
Query: 142 R 142
+
Sbjct: 123 K 123
>2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein
structure initiative, midwest center for structural
genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP:
d.108.1.1
Length = 149
Score = 54.7 bits (132), Expect = 1e-09
Identities = 16/118 (13%), Positives = 34/118 (28%), Gaps = 21/118 (17%)
Query: 25 PLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYI 84
K+ P + S +IG + + + ++
Sbjct: 33 MAENLKESDQFPEWESAGIYDGNQLIGYAM--------YGRWQDGRV-----------WL 73
Query: 85 LSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
+ + ++ G L+ L E ++L V +N AI Y++ F
Sbjct: 74 DRFLIDQRFQGQGYGKAACRLLMLKL--IEKYQTNKLYLSVYDTNSSAIRLYQQLGFV 129
>3frm_A Uncharacterized conserved protein; APC61048, staphylococcus
epidermidis ATCC structural genomics, PSI-2, protein
structure initiative; HET: MES; 2.32A {Staphylococcus
epidermidis}
Length = 254
Score = 55.0 bits (132), Expect = 3e-09
Identities = 16/124 (12%), Positives = 34/124 (27%), Gaps = 27/124 (21%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ L A N +G++ + I
Sbjct: 154 HIYSSYNLDDIERLVAYVNHQPVGIV--------------------DIIMTDKTIEIDGF 193
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147
GV E+++ GI S + + ++ + + L V A Y ++ + F
Sbjct: 194 GVLEEFQHQGIGSEIQAYVG------RMANERPVIL-VADGKDTAKDMYLRQGYVYQGFK 246
Query: 148 PYYY 151
+
Sbjct: 247 YHIL 250
>2vez_A Putative glucosamine 6-phosphate acetyltransferase;
acyltransferase; HET: ACO G6P; 1.45A {Aspergillus
fumigatus} PDB: 2vxk_A*
Length = 190
Score = 53.8 bits (129), Expect = 4e-09
Identities = 27/155 (17%), Positives = 45/155 (29%), Gaps = 26/155 (16%)
Query: 4 RSPDYQANVLTS-TSLRHSGNYPLSWYKDITSE------PSFYSLAALYNGVIIGLIVAE 56
DY+ L L G+ + + + G I+G
Sbjct: 54 CRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRARSDEYYLLVVCDGEGRIVG----- 108
Query: 57 ILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENS 116
SL E K I + HIE + V + + + ++ L AE
Sbjct: 109 ---TGSLVVERKFIHSLGMVGHIE-----DIAVEKGQQGKKLGLRIIQALDYV---AEKV 157
Query: 117 SCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYY 151
C +L ++ FY K F+ +Y
Sbjct: 158 GCYKT---ILDCSEANEGFYIKCGFKRAGLEMAHY 189
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown
function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus}
SCOP: d.108.1.1 PDB: 1wk4_A*
Length = 174
Score = 53.2 bits (128), Expect = 5e-09
Identities = 15/121 (12%), Positives = 31/121 (25%), Gaps = 19/121 (15%)
Query: 24 YPLSWYKDITSEPSFYS--LAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEV 81
W + + + +A +G ++G +
Sbjct: 43 QAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFG--------------PDRASGFPGYT 88
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
+ ++ V ++R G+ L L + + VL N FYE
Sbjct: 89 AELWAIYVLPTWQRKGLGRALFHEGARLLQAE---GYGRMLVWVLKENPKGRGFYEHLGG 145
Query: 142 R 142
Sbjct: 146 V 146
>3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha
sandwich, structural genomics, PSI-2, prote structure
initiative; HET: MSE; 1.87A {Bordetella parapertussis
12822}
Length = 189
Score = 53.0 bits (127), Expect = 8e-09
Identities = 9/94 (9%), Positives = 28/94 (29%), Gaps = 11/94 (11%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
+V ++ + V R + + +L +++ E + + V N+ + +
Sbjct: 93 DVLFVWQVAVHSRARGHRLGRAMLGHILER---QECRHVRHLETTVGPDNQASRRTFAGL 149
Query: 140 RFRLHSFLPYYYSIKGRSRDGFTYVLYINGGHAA 173
+ + + F + H
Sbjct: 150 AGERGAHV--------SEQPFFDRQAFGGADHDD 175
>3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.75A {Listeria innocua}
Length = 163
Score = 52.3 bits (126), Expect = 9e-09
Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 26/119 (21%)
Query: 24 YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83
Y + + S F +IG + + + +K
Sbjct: 48 YNVETLHNRISATPFA--VLEQADKVIG--------FANFIELEKG-----------KSE 86
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
+ + + + + G+ + LL+ ++ +F++V N+ AIHFY+ + F
Sbjct: 87 LAAFYLLPEVTQRGLGTELLEVGMTLF-----HVPLPMFVNVEKGNETAIHFYKAKGFV 140
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint
center for structural genomics, JCSG, protein structu
initiative; 2.20A {Staphylococcus aureus subsp}
Length = 163
Score = 52.1 bits (125), Expect = 1e-08
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
+ + + V + YR I LLD +I + + I+L + A +FY
Sbjct: 77 NMSALKKMFVDKGYRNLKIGKKLLDKVIMT---CKEQNIDGIYLGTIDKFISAQYFYSNN 133
Query: 140 RFRL--HSFLPYYY 151
FR LP +
Sbjct: 134 GFREIKRGDLPSSF 147
>2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase,
structural genomics, montreal-K bacterial structural
genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia
coli} PDB: 2fs5_A*
Length = 235
Score = 52.7 bits (126), Expect = 1e-08
Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 9/103 (8%)
Query: 55 AEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDY------RRNGIASLLLDNLIS 108
A+ ++ D L GY+ ++ G + L+ ++
Sbjct: 135 AQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNATDARIGLLAGRGAGAELMQTALN 194
Query: 109 HLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYY 151
A + + N A+ Y + + S + Y
Sbjct: 195 W---AYARGKTTLRVATQMGNTAALKRYIQSGANVESTAYWLY 234
>1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET:
ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1
PDB: 1i1d_A* 1i21_A
Length = 160
Score = 51.8 bits (124), Expect = 1e-08
Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 45 YNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLD 104
VI+ + ++ E K I HIE + V+ Y+ G+ LL+D
Sbjct: 64 NPMVIVDKRTETVAATGNIIIERKIIHELGLCGHIE-----DIAVNSKYQGQGLGKLLID 118
Query: 105 NLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146
L++ + C I +L ++ + FYEK F
Sbjct: 119 QLVTI---GFDYGCYKI---ILDCDEKNVKFYEKCGFSNAGV 154
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu
initiative, midwest center for structural genomics,
MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Length = 162
Score = 51.4 bits (123), Expect = 2e-08
Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 15/96 (15%)
Query: 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAI 133
++ + ++ S +Y G SLL L A + ++ +N I
Sbjct: 68 CMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKR---AVWEGRRKMYAQTNHTNHRMI 124
Query: 134 HFYEKR------------RFRLHSFLPYYYSIKGRS 157
F+E + R SF Y ++ +S
Sbjct: 125 RFFESKGFTKIHESLQMNRLDFGSFYLYVKELENQS 160
>2gan_A 182AA long hypothetical protein; alpha-beta protein., structural
genomics, PSI, protein struc initiative; 2.10A
{Pyrococcus horikoshii} SCOP: d.108.1.1
Length = 190
Score = 51.2 bits (122), Expect = 3e-08
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 43 ALYNGVIIGLIVAEILQYTSLNKEDKDIL-ASSFDKHIEVGYILSLGVSEDYRRNGIASL 101
+ IIG I ++K I + +VG I V +++ GI S
Sbjct: 72 YQKDNRIIGTIA-----LVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGST 126
Query: 102 LLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
LL+ + L S K ++ + + ++Y K+ FR
Sbjct: 127 LLEFAVKRL----RSLGKDPYVVTFPNLEAYSYYYMKKGFRE 164
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine
N-acetyltransferase, structural genomics, protein
structure initiative, PSI; HET: ACO; 1.84A {Homo
sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Length = 170
Score = 50.7 bits (121), Expect = 3e-08
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
Y+ + V +YR GI S ++ + A + C L VL N+ A+ Y+
Sbjct: 90 YLEDIYVMPEYRGQGIGSKIIKKVAEV---ALDKGCSQFRLAVLDWNQRAMDLYKA 142
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint
center for structural genomics, JCSG, protein structu
initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes
str}
Length = 179
Score = 51.0 bits (122), Expect = 4e-08
Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 11/113 (9%)
Query: 30 KDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGV 89
+ I L G + G ++ D D + Y+ + V
Sbjct: 60 QRIELGEVA--LFETEAGALAGAMI------IRKTPSDWDTDLWEDLAIDKAYYLHRIMV 111
Query: 90 SEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
S + ++ ++ S I L + SN+ Y + F+
Sbjct: 112 SRAFSGISLSKQMIYFAEKL---GIEMSVPFIRLDCIESNETLNQMYVRYGFQ 161
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas
aerugi PSI, protein structure initiative; 2.00A
{Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Length = 166
Score = 50.5 bits (121), Expect = 4e-08
Identities = 27/111 (24%), Positives = 36/111 (32%), Gaps = 17/111 (15%)
Query: 35 EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYR 94
+L L G IG V Y S++ Y+ L V+ +YR
Sbjct: 56 GSPTRALMCLSEGRPIGYAVF-FYSY------------STW-LGRNGIYLEDLYVTPEYR 101
Query: 95 RNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145
G LL L A + C + VL N+PAI FY
Sbjct: 102 GVGAGRRLLRELARE---AVANDCGRLEWSVLDWNQPAIDFYRSIGALPQD 149
>2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics,
structural genomics consortium, SGC; HET: 16G COA; 1.80A
{Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A
Length = 184
Score = 50.7 bits (121), Expect = 4e-08
Identities = 21/128 (16%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 26 LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYIL 85
+ ++ + +Y V+ + + +I+ +L E K I + + +E
Sbjct: 72 MKSFEHMKKSGDYYVT------VVEDVTLGQIVATATLIIEHKFIHSCAKRGRVE----- 120
Query: 86 SLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLH- 144
+ VS++ R + LLL L ++ +C I L + FY+K + +
Sbjct: 121 DVVVSDECRGKQLGKLLLSTLTLL---SKKLNCYKI---TLECLPQNVGFYKKFGYTVSE 174
Query: 145 -SFLPYYY 151
+++ +
Sbjct: 175 ENYMCRRF 182
>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA,
spermine, spermidine, transferase; HET: COA; 1.50A
{Paramecium bursaria chlorella virus 1}
Length = 197
Score = 50.3 bits (120), Expect = 7e-08
Identities = 20/120 (16%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 39 YSLAALY-NGVIIGLIVA------EILQYTSLNKEDK--DILASSFDKHIEVGYILSLGV 89
+S A + + I I+ E + Y ++ + D D+ + + + +
Sbjct: 56 HSFAFVDADDNIKAQILNIPYDAYENMHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAI 115
Query: 90 SEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPY 149
+ G+A+ LL I + + K I+ +N + + +EK F + Y
Sbjct: 116 GSEVTGKGLATKLLKKTIEE---SSSHGFKYIYGD--CTNIISQNMFEKHGFETVGSVKY 170
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac
biosynthesis, alpha/beta protein; HET: EPE; 1.50A
{Arabidopsis thaliana}
Length = 149
Score = 49.0 bits (117), Expect = 1e-07
Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 22/126 (17%)
Query: 29 YKDITSEPSFYSLAALY---NGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYIL 85
+++I S + + + +G I S+ E K + HIE
Sbjct: 41 FEEIRSYGDDHVICVIEEETSGKIAA--------TGSVMIEKKFLRNCGKAGHIE----- 87
Query: 86 SLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145
+ V +R + +++ L+ H ++ C + +L + FYEK S
Sbjct: 88 DVVVDSRFRGKQLGKKVVEFLMDH---CKSMGCYKV---ILDCSVENKVFYEKCGMSNKS 141
Query: 146 FLPYYY 151
Y
Sbjct: 142 IQMSKY 147
>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein
structure initiative, NEW research center for structural
genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP:
d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A
2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*
Length = 171
Score = 49.2 bits (117), Expect = 1e-07
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
Y+ V DYR GI S +L NL A C ++ V N+P+I+FY++R
Sbjct: 90 YLEDFFVMSDYRGFGIGSEILKNLSQV---AMRCRCSSMHFLVAEWNEPSINFYKRR 143
>1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein
structure initiative, northeast structural genomics
consortium, NESG; 2.00A {Drosophila melanogaster} SCOP:
d.108.1.5
Length = 312
Score = 50.2 bits (119), Expect = 2e-07
Identities = 10/88 (11%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 63 LNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIF 122
+ +++A F + + L V R G+ LL + + E +
Sbjct: 215 CRSDTGELIAWIF--QNDFSGLGMLQVLPKAERRGLGGLLAAAMSREIARGE---EITLT 269
Query: 123 LHVLTSNKPAIHFYEKRRFRLHSFLPYY 150
++ +N + ++ ++ +
Sbjct: 270 AWIVATNWRSEALLKRIGYQKDLVNEWI 297
>3owc_A Probable acetyltransferase; structural genomics, PSI-2, protein
structure initiative, MI center for structural genomics,
MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}
Length = 188
Score = 48.9 bits (117), Expect = 2e-07
Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 27/143 (18%)
Query: 24 YPLS-------WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD 76
+PLS + P +A + +IG L + ++
Sbjct: 47 HPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHC--------QLLFDRRN------- 91
Query: 77 KHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFY 136
+ + I+ ++ R G+ +L+ L++ ++ + + L+V N A H Y
Sbjct: 92 GVVRLARIV---LAPSARGQGLGLPMLEALLAEA--FADADIERVELNVYDWNAAARHLY 146
Query: 137 EKRRFRLHSFLPYYYSIKGRSRD 159
+ FR + +
Sbjct: 147 RRAGFREEGLRRSATRVGRERWN 169
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural
genomics consortium, SGC,; 1.86A {Trypanosoma brucei}
PDB: 3fb3_A
Length = 161
Score = 48.5 bits (116), Expect = 2e-07
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
VG+I + V YR G+ L+ +L + + C + +L S++ ++ FYEK
Sbjct: 96 VGHIEDVVVDPSYRGAGLGKALIMDLCEI---SRSKGCYKV---ILDSSEKSLPFYEK 147
>3i9s_A Integron cassette protein; oyster POND, woods HOLE,
acetyltransferase, structural genomics, PSI-2, protein
structure initiative; 2.20A {Vibrio cholerae}
Length = 183
Score = 48.2 bits (115), Expect = 3e-07
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 17/104 (16%)
Query: 35 EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYR 94
+AA+ + ++G + + + K Y+ L VS R
Sbjct: 71 HSGVKVIAAVEHDKVLGFATY-TIMF------------PAP-KLSGQMYMKDLFVSSSAR 116
Query: 95 RNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
GI L+ +L + A +C+ + ++N A FY+
Sbjct: 117 GKGIGLQLMKHLATI---AITHNCQRLDWTAESTNPTAGKFYKS 157
>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A
{Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*
Length = 177
Score = 47.9 bits (114), Expect = 3e-07
Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
+ L V R G+ L+D + A + L A FY +
Sbjct: 93 VQKLMVLPSARGRGLGRQLMDEVEQV---AVKHKRGLLHLDTEA-GSVAEAFYSALAYTR 148
Query: 144 HSFLP-YYYSIKGRSRDGFTY 163
LP Y + GR Y
Sbjct: 149 VGELPGYCATPDGRLHPTAIY 169
>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative,
PSI, midwest center for structural GE MCSG; 1.90A
{Bacillus cereus} SCOP: d.108.1.1
Length = 140
Score = 47.3 bits (112), Expect = 4e-07
Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 27/130 (20%)
Query: 24 YPLSWYKDITSEP--SFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEV 81
Y +S D +P + G I G + + +
Sbjct: 24 YNMSILTDEVKQPMEEVSLVVKNEEGKIFGGVTGTM--------------------YFYH 63
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
+I L V E R +G S LL + A+ C+ I L + + A FY+K +
Sbjct: 64 LHIDFLWVDESVRHDGYGSQLLHEIEGI---AKEKGCRLILLD--SFSFQAPEFYKKHGY 118
Query: 142 RLHSFLPYYY 151
R + + +
Sbjct: 119 REYGVVEDHP 128
>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II;
alpha-beta-alpha sandwich, GCN4-related
acetyltransferase, S genomics, PSI; HET: ACO; 2.35A
{Rhodopseudomonas palustris} SCOP: d.108.1.1
Length = 172
Score = 47.1 bits (112), Expect = 7e-07
Identities = 18/92 (19%), Positives = 28/92 (30%), Gaps = 8/92 (8%)
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
+I L V DY + + L+D L A + + + A F+ KR +
Sbjct: 83 DHIDMLYVHPDYVGRDVGTTLIDALEKL---AGARGALILTVDA---SDNAAEFFAKRGY 136
Query: 142 RLHSFLPYYYSIKGRSRDGFTYVLYINGGHAA 173
SI G T + A
Sbjct: 137 VAKQ--RNTVSINGEWLANTTMTKSLADSAAP 166
>3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative
acetyltransferase; HET: MSE COA SO4; 1.52A
{Exiguobacterium sibiricum 255-15} PDB: 3gya_A*
Length = 150
Score = 46.5 bits (110), Expect = 9e-07
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHF 135
G I + V + R +GI + LL+ ++S + ++ ++ A F
Sbjct: 71 SGQARTGRIRHVYVLPEARSHGIGTALLEKIMSE--------AFLTYDRLVLYSEQADPF 122
Query: 136 YEKRRFR 142
Y+ F+
Sbjct: 123 YQGLGFQ 129
>3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology,
midwest center for structu genomics, MCSG, alpha-beta
sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus}
Length = 330
Score = 47.8 bits (113), Expect = 1e-06
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Query: 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNK-PAIHFYEKR 139
G+I S+GV +R GIA LL + + + L V ++ A Y +
Sbjct: 246 KGWIGSVGVRRPWRGRGIALALLQEVFGVYYRR---GVREVELSVDAESRTGAPRLYRRA 302
Query: 140 RFR-LHSFLPYYYSIK-GRSR 158
H ++ + I+ G
Sbjct: 303 GMHVKHRYVLHRKEIRPGIDL 323
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex;
HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP:
d.108.1.1 PDB: 1qso_A
Length = 152
Score = 46.2 bits (110), Expect = 1e-06
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
YI L V E+ R G L+ + A+ +++ SN A Y K
Sbjct: 83 KIYINDLYVDENSRVKGAGGKLIQFVYDE---ADKLGTPSVYWCTDESNHRAQLLYVK 137
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A
{Caenorhabditis elegans} PDB: 4ag9_A*
Length = 165
Score = 46.4 bits (110), Expect = 1e-06
Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 12/105 (11%)
Query: 48 VIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLI 107
VI +++ SL E K I + +E + V + RR + ++LL L+
Sbjct: 72 VIEDSNSQKVVASASLVVEMKFIHGAGSRGRVE-----DVVVDTEMRRQKLGAVLLKTLV 126
Query: 108 SHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS-FLPYYY 151
S ++ I L + FY + F+ F+ +
Sbjct: 127 SL---GKSLGVYKI---SLECVPELLPFYSQFGFQDDCNFMTQRF 165
>3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148,
GNAT famil protein structure initiative; 2.15A
{Bacteroides thetaiotaomicron}
Length = 181
Score = 46.5 bits (110), Expect = 1e-06
Identities = 22/145 (15%), Positives = 39/145 (26%), Gaps = 24/145 (16%)
Query: 27 SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS 86
+ +F++ + + IG I E Y+
Sbjct: 39 HLREYTDRIGNFHNNIIFDDDLPIGFITYWDFD--------------------EFYYVEH 78
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146
+ R G L++L + + V K I+FY++ F L
Sbjct: 79 FATNPALRNGGYGKRTLEHLCEF---LKRPIVLEVERPVEEMAKRRINFYQRHGFTLWEK 135
Query: 147 LPYYYSIKGRSRDGFTYVLYINGGH 171
YY D L ++G
Sbjct: 136 -DYYQPPYKEGDDFLPMYLMVHGNL 159
>3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases,
structural genomics, joint CENT structural genomics,
JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans}
Length = 145
Score = 45.6 bits (108), Expect = 1e-06
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 29/125 (23%)
Query: 30 KDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGV 89
I + + LA +G +IG + A I I L V
Sbjct: 41 WRILDRAAVFVLARTPDGQVIGFVNA-------------------LSDGILAASIPLLEV 81
Query: 90 SEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS--FL 147
+R G+ S L+ +++ L +++ L+ + + FYE+ + + FL
Sbjct: 82 QAGWRSLGLGSELMRRVLTEL--------GDLYMVDLSCDDDVVPFYERLGLKRANAMFL 133
Query: 148 PYYYS 152
Y +
Sbjct: 134 RRYDN 138
>1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA
KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP:
d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A*
Length = 181
Score = 46.2 bits (109), Expect = 2e-06
Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 11/94 (11%)
Query: 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHF 135
+ GY+ + V D+R + S LLD + + A L L+S+ A
Sbjct: 73 GNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQ-------LGALSSSARARRL 125
Query: 136 YEKRRFRLHSFLPYYYSIKGRSR----DGFTYVL 165
Y R + + G R DG +VL
Sbjct: 126 YASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVL 159
>3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii}
Length = 288
Score = 46.9 bits (111), Expect = 2e-06
Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 18/127 (14%)
Query: 26 LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILAS-SFDKHIEVGYI 84
+ E S G ++A + + + + +I
Sbjct: 40 AYNFPGP-RESVKSSFEISLEVQPDGCLLAF---------LKDEPVGMGCIFFYNKQAWI 89
Query: 85 LSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLH 144
+GV + Y+R GI + + L+ + + L ++ Y+K +F
Sbjct: 90 GLMGVKKAYQRRGIGTEVFRRLLEIG-------RRKVDTIRLDASSQGYGLYKKFKFVDE 142
Query: 145 SFLPYYY 151
Y
Sbjct: 143 YRTVRYE 149
>1y7r_A Hypothetical protein SA2161; structural genomics, protein structure
initiative, PSI, midwest center for structural genomics;
1.70A {Staphylococcus aureus} SCOP: d.108.1.1
Length = 133
Score = 44.8 bits (106), Expect = 2e-06
Identities = 12/61 (19%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYE 137
V I+ + V + Y+ SL++++++ + +N S +++++ ++ ++ PA Y
Sbjct: 60 GGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKY---IKNVSVESVYVSLI-ADYPADKLYV 115
Query: 138 K 138
K
Sbjct: 116 K 116
>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu
initiative, midwest center for structural genomics,
MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP:
d.108.1.1
Length = 152
Score = 45.3 bits (107), Expect = 2e-06
Identities = 23/128 (17%), Positives = 34/128 (26%), Gaps = 26/128 (20%)
Query: 24 YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83
Y L+ + + + + G +V Y
Sbjct: 39 YNLARFGESDKRDLNI-TIRNDDNSVTGGLVGHT--------------------ARGWLY 77
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
+ L V E R GIA LL A C ++ T N A+ YE+ F
Sbjct: 78 VQLLFVPEAMRGQGIAPKLLAMAEEE---ARKRGCMGAYID--TMNPDALRTYERYGFTK 132
Query: 144 HSFLPYYY 151
L
Sbjct: 133 IGSLGPLS 140
>2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI,
protein structure INIT midwest center for structural
genomics; 2.01A {Streptococcus pneumoniae} SCOP:
d.108.1.1
Length = 138
Score = 44.5 bits (105), Expect = 4e-06
Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 25/108 (23%)
Query: 35 EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYR 94
S AL ++GLI ++ L V Y+
Sbjct: 39 SHSLVIYLALDGDAVVGLIRL-------------------VGDGFSSVFVQDLIVLPSYQ 79
Query: 95 RNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
R GI S L+ + + + + + + + FY F
Sbjct: 80 RQGIGSSLMKEALGNF---KEAYQVQLATE---ETEKNVGFYRSMGFE 121
>2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone,
acetyltransferase, antibiotic resistance; HET: COA RIO;
1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A*
2qir_A* 2pr8_A*
Length = 202
Score = 44.5 bits (105), Expect = 8e-06
Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ + ++ S A+ NG IG + + + +++ +
Sbjct: 68 YLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGDGWWEEETDPGVRGIDQLLA----- 122
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
+ G+ + L+ L+ L + I SN AI YEK F
Sbjct: 123 --NASQLGKGLGTKLVRALVELL--FNDPEVTKIQTDPSPSNLRAIRCYEKAGFER 174
>2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis;
HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A*
Length = 339
Score = 44.7 bits (105), Expect = 1e-05
Identities = 8/71 (11%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
V ++R + + +LL + ++ + + N P I
Sbjct: 262 AYALQGMTVVHREHRGHALGTLLKLANLEYV-LRHEPEVRLVETANAEDNHPMIAVNAAL 320
Query: 140 RFRLHSFLPYY 150
F + ++
Sbjct: 321 GFEPYDRWVFW 331
Score = 34.7 bits (79), Expect = 0.022
Identities = 10/79 (12%), Positives = 16/79 (20%), Gaps = 10/79 (12%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT-------SNKPA 132
+ L V RR GI L + A + V+ +
Sbjct: 83 PTARVDQLLVHPGRRRRGIGRALWAHA---RELARKHDRTTLTATVVESLPSGPAQDPGP 139
Query: 133 IHFYEKRRFRLHSFLPYYY 151
F +
Sbjct: 140 AAFAAAMGAHRSDIPAGTH 158
>3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism;
3.30A {Coxiella burnetii}
Length = 170
Score = 43.3 bits (103), Expect = 1e-05
Identities = 29/153 (18%), Positives = 43/153 (28%), Gaps = 28/153 (18%)
Query: 19 RHSGNYPLS--------WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDI 70
+ P K I + + +GL+ L + D
Sbjct: 31 SYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLV--------ELTEIDFI- 81
Query: 71 LASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNK 130
+ E I+S G A+ D + + + N I+L V N
Sbjct: 82 -----HRRCEFAIIIS----PGEEGKGYATEATDLTVEYAFSILN--LHKIYLLVDEDNP 130
Query: 131 PAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTY 163
A+H Y K F L Y KGR R
Sbjct: 131 AALHIYRKSGFAEEGKLVDEYYSKGRYRTAIRM 163
>2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase,
loading, phosphopantetheine, transferase, lyase; HET:
SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A*
Length = 224
Score = 43.5 bits (102), Expect = 2e-05
Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 26/154 (16%)
Query: 39 YSLAALYNGVIIGLIVAEILQYTSLNKE-DKDILASSFDKHIEVGYILSLGVSEDYRRNG 97
I+G I ++ + L + + V +L++ + + + G
Sbjct: 55 GQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQVPLLHTESGVVVQLLAVNILPELQNQG 114
Query: 98 IASLLLDNLISHLTTAENSSCKAIFLHVLTSNK-----------------------PAIH 134
+ LL+ ++ + A+ S + + L N P +
Sbjct: 115 LGDRLLEFMLQY--CAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESGLLVDPLLR 172
Query: 135 FYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYIN 168
F++ ++ LP Y ++ V Y
Sbjct: 173 FHQIHGAKIEKLLPGYRPKDWENQTCGVLVSYDI 206
>2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint
center for structural genomics, JCSG; HET: MSE; 1.28A
{Streptococcus agalactiae 2603V}
Length = 201
Score = 43.1 bits (101), Expect = 2e-05
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 14/125 (11%)
Query: 20 HSGNYPL--SWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDK 77
YP DI + ++ + +G++ + D
Sbjct: 54 KEDGYPNRNDIIDDILNGYAWV---GIEDGMLATYAA---VIDGHEEVYDAIYEGKWLHD 107
Query: 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYE 137
+ + +S +R G+A L LI E N H
Sbjct: 108 NHRYLTFHRIAISNQFRGRGLAQTFLQGLI------EGHKGPDFRCDTHEKNVTMQHILN 161
Query: 138 KRRFR 142
K ++
Sbjct: 162 KLGYQ 166
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint
center for structural genomics, JCSG; HET: MSE FLC;
2.00A {Streptococcus agalactiae 2603V}
Length = 181
Score = 42.5 bits (100), Expect = 3e-05
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 9/93 (9%)
Query: 80 EVGYILSLGVSEDYRRN--GIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYE 137
+ + YR N + L + + A S I L K + FYE
Sbjct: 94 KTAVLKKFFTYPKYRGNPVRLGRKLFERFMLF---ARASKFTRIVLDTPEKEKRSHFFYE 150
Query: 138 KRRFRL--HSFLPYYYSIKGRSRDGFTYVLYIN 168
+ F+ L Y RD YV ++
Sbjct: 151 NQGFKQITRDELDVDYIFPD--RDSRIYVKLLD 181
>2qec_A Histone acetyltransferase HPA2 and related acetyltransferases;
NP_600742.1, acetyltransferase (GNAT) family; 1.90A
{Corynebacterium glutamicum atcc 13032}
Length = 204
Score = 41.9 bits (98), Expect = 5e-05
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
Y+ ++ S R G+ S LL++ I+ +++ ++ A Y + F
Sbjct: 127 YLYTVATSSSARGTGVGSALLNHGIAR--------AGDEAIYLEATSTRAAQLYNRLGFV 178
>3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella
pneumophila subsp. pneumophila, structural genomics,
PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp}
Length = 182
Score = 41.4 bits (97), Expect = 7e-05
Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 17/109 (15%)
Query: 34 SEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDY 93
+P A N + ++ TS ++ ++ + + + DY
Sbjct: 60 GKPWATHWIAYDNEIPFAYLI------TSEIEKSEEYPDGAVTLDLFIC-------RLDY 106
Query: 94 RRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
G++ ++ I + K + ++ SN+ A+H Y+K F
Sbjct: 107 IGKGLSVQMIHEFILSQFSD----TKIVLINPEISNERAVHVYKKAGFE 151
>3eo4_A Uncharacterized protein MJ1062;
APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM
2661, S genomics, PSI-2; HET: MES PG6; 2.19A
{Methanocaldococcus jannaschii}
Length = 164
Score = 40.0 bits (94), Expect = 2e-04
Identities = 14/129 (10%), Positives = 41/129 (31%), Gaps = 29/129 (22%)
Query: 26 LSWYKDITSEPSF-YSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYI 84
SW+ + + L +G + ++++ + + E+G +
Sbjct: 53 YSWWMSRENRVDWIILLRENNTIRKVGSV--------NVSQLN--------TDNPEIGIL 96
Query: 85 LSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK------ 138
+ I + ++ +N K +L +N +I +E
Sbjct: 97 IG---EFFLWGKHIGRHSVSLVLKW---LKNIGYKKAHARILENNIRSIKLFESLGFKKT 150
Query: 139 RRFRLHSFL 147
++ R + ++
Sbjct: 151 KKGRENEWI 159
>3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016
transferase, center for structural genomics of
infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae}
Length = 176
Score = 39.9 bits (94), Expect = 2e-04
Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 28/154 (18%)
Query: 18 LRHSGNYPLS-------WYKDITSEPSFYSLAAL-YNGVIIGLIVAEILQYTSLNKEDKD 69
+ + P Y + + +IGL+ L + +
Sbjct: 31 MSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLV--------ELIEINYI 82
Query: 70 ILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSN 129
+ E I++ +++ G A L++ + + T N I+LHV N
Sbjct: 83 ------HRSAEFQIIIA----PEHQGKGFARTLINRALDYSFTILN--LHKIYLHVAVEN 130
Query: 130 KPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTY 163
A+H YE+ F L + I GR +D
Sbjct: 131 PKAVHLYEECGFVEEGHLVEEFFINGRYQDVKRM 164
>1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic
resistance, coenzyme A; HET: COA; 1.80A {Enterococcus
faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A*
Length = 180
Score = 39.7 bits (92), Expect = 2e-04
Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 27/126 (21%)
Query: 24 YPLSWYKDITS--EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEV 81
Y S +++ P ++AA+ ++G I A I QY
Sbjct: 29 YGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGA-IPQYGI-----------------TG 70
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHV----LTSNKPAIHFYE 137
+ L V R+N I + L++ L + I+L + YE
Sbjct: 71 WELHPLVVESSRRKNQIGTRLVNYLEKE---VASRGGITIYLGTDDLDHGTTLSQTDLYE 127
Query: 138 KRRFRL 143
++
Sbjct: 128 HTFDKV 133
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2,
MCSG, structure initiative; 2.50A {Klebsiella pneumoniae
subsp}
Length = 162
Score = 39.3 bits (92), Expect = 3e-04
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF-RLHSFL 147
+ +R + LL L + A C + L AI Y + + +F
Sbjct: 82 IDPQHRGQQLGEKLLAALEAK---ARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFA 138
Query: 148 PY 149
PY
Sbjct: 139 PY 140
>4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti}
PDB: 4fd6_A
Length = 222
Score = 39.7 bits (92), Expect = 4e-04
Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 7/72 (9%)
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146
L V +R G+A L++ A + + + + + F
Sbjct: 136 LSVDSRFRGKGLAKKLIEKSEEL---ALDRGFQVMKTD--ATGAFSQRVVSSLGFITKCE 190
Query: 147 LPY--YYSIKGR 156
+ Y Y G
Sbjct: 191 INYTDYLDENGE 202
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 39.8 bits (92), Expect = 6e-04
Identities = 36/228 (15%), Positives = 72/228 (31%), Gaps = 70/228 (30%)
Query: 38 FYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRN- 96
F L+ I I+ ++ + + + ++ SL V + + +
Sbjct: 375 FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY--------SL-VEKQPKEST 425
Query: 97 -GIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH-----FYE-KRRFRLHSFLP- 148
I S+ L+ L V N+ A+H Y + F +P
Sbjct: 426 ISIPSIYLE------------------LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467
Query: 149 ----YYYSIKGRSRDGFTYVLYINGGHAAWSLCDYVKHWCESLYSK-----EFLSKKKGI 199
Y+YS ++ + H ++ + +L+ FL +K I
Sbjct: 468 YLDQYFYS----------HIGH----HL--KNIEHPERM--TLFRMVFLDFRFLEQK--I 507
Query: 200 RNWLVCIKYLKCQDWFPIDYPLSWYKD-IT-SEPSFYSL-AALRNFFF 244
R+ + L +YK I ++P + L A+ +F
Sbjct: 508 RH--DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLP 553
Score = 30.6 bits (68), Expect = 0.59
Identities = 49/278 (17%), Positives = 77/278 (27%), Gaps = 97/278 (34%)
Query: 8 YQANVLTSTSLRHSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIV------AEILQY- 60
YQ + ++ HS N L I +E + Y L+V A+
Sbjct: 207 YQIDPNWTSRSDHSSNIKLR-IHSIQAELRRLLKSKPYE---NCLLVLLNVQNAKAWNAF 262
Query: 61 --------TSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTT 112
T+ K+ D L+++ HI LD+ LT
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHIS----------------------LDHHSMTLTP 300
Query: 113 AENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRS-RDGFTYVLYINGGH 171
E S +L + P + + P SI S RD G
Sbjct: 301 DEVKSLLLKYLDCRPQDLPR---------EVLTTNPRRLSIIAESIRD----------GL 341
Query: 172 AAWSLCDYVKHWCESLYSKEFLSKKKGIRNWLVCIKYLKCQDW---------FPIDYPLS 222
A W D KH + + L+ I + L+ ++ FP +
Sbjct: 342 ATW---DNWKH-----VNCDKLTTI--IE---SSLNVLEPAEYRKMFDRLSVFPPSAHIP 388
Query: 223 -------WYKDITSEPSF-------YSLAALRNFFFIY 246
W+ I S+ YSL +
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426
>3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu
genomics, PSI-2, protein structure initiative; HET: MSE;
2.52A {Vibrio parahaemolyticus}
Length = 150
Score = 38.2 bits (89), Expect = 6e-04
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRR 140
+ + + DYR LLL+ + +++ + IF+ ++H++ ++
Sbjct: 68 KAEMACVAIHPDYRDGNRGLLLLNYMKHR---SKSENINQIFV----LTTHSLHWFREQG 120
Query: 141 FR 142
F
Sbjct: 121 FY 122
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 39.6 bits (92), Expect = 8e-04
Identities = 40/274 (14%), Positives = 82/274 (29%), Gaps = 89/274 (32%)
Query: 13 LTSTSLRHSGNYPLSWYKDITS---EPSFYSLAALYNGVIIGLIVAEILQ---------- 59
+ + S R PL+ ++ E A + +A LQ
Sbjct: 1 MDAYSTR-----PLT----LSHGSLEHVLLVPTASF-------FIASQLQEQFNKILPEP 44
Query: 60 YTSLNKEDKDI----LASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAEN 115
+D+ L F +GY+ SL V + G +L+ ++
Sbjct: 45 TEGFAADDEPTTPAELVGKF-----LGYVSSL-VEPS--KVGQFDQVLNLCLTEFENC-- 94
Query: 116 SSCKAIFL-----HVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYV----LY 166
+L H L + + + + + Y + + ++ F L+
Sbjct: 95 ------YLEGNDIHALAAKLLQEN--DTTLVKTKELIKNYITARIMAKRPFDKKSNSALF 146
Query: 167 --INGGHAAWSLC----------DYVKHWCE--SLYS------KEFLSKKKGIRNWLVCI 206
+ G+A L DY + E LY + + + L+
Sbjct: 147 RAVGEGNA--QLVAIFGGQGNTDDYFE---ELRDLYQTYHVLVGDLIKFSAETLSELIRT 201
Query: 207 KYLKCQDWFP--IDYPLSWYKDITSEPSFYSLAA 238
L + F ++ L W ++ ++ P L +
Sbjct: 202 T-LDAEKVFTQGLN-ILEWLENPSNTPDKDYLLS 233
Score = 39.3 bits (91), Expect = 0.001
Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 99/230 (43%)
Query: 13 LTSTSLRHSGNYP-----LSWYKDITSEPSF-YSLAALYNGVIIGL-------IVAEILQ 59
L T+L + L W ++ ++ P Y L+ + +IG+ + A++L
Sbjct: 198 LIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLG 257
Query: 60 YT---------SLNKEDKDILAS----------SFDKHIE--------VGY--------- 83
+T + ++ + SF + +G
Sbjct: 258 FTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNT 317
Query: 84 ILSLGVSEDYRRNG---------IASLLLDNLISHLTTAENSSC---KAIFL-------- 123
L + ED N I++L + + ++ NS K + +
Sbjct: 318 SLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKT-NSHLPAGKQVEISLVNGAKN 376
Query: 124 HVLT------------------------SNKPAIHFYEKRRFRL-HSFLP 148
V++ S P + +R+ + + FLP
Sbjct: 377 LVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIP----FSERKLKFSNRFLP 422
Score = 28.1 bits (62), Expect = 3.5
Identities = 45/248 (18%), Positives = 70/248 (28%), Gaps = 77/248 (31%)
Query: 8 YQANVLTSTSLRHSGNYPLSWYKDITSEP-SFYS--------------LAALYN---GVI 49
A ++ N L ++ + + L LY ++
Sbjct: 127 ITARIMAKRPFDKKSNSAL--FRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLV 184
Query: 50 IGLI--VAEILQYTSLNKEDKDILASSFDKHIEVGY-ILSLGVSEDYRRNGIASLLLDNL 106
LI AE L L + D +K G IL + +
Sbjct: 185 GDLIKFSAETLS--ELIRTTLD-----AEKVFTQGLNILEWLENPSNTPD---------- 227
Query: 107 ISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLY 166
+L + SC I + L H+ +L F P G R
Sbjct: 228 KDYLLSIP-ISCPLIGVIQLA------HYV--VTAKLLGFTP------GELRSYLKGAT- 271
Query: 167 INGGH-------AAWSLCDYVKHWCESLYSKEFLSKKKGIRNWLVCIKYLKCQDWFP-ID 218
GH A + D W ES + S +K I L I ++C + +P
Sbjct: 272 ---GHSQGLVTAVAIAETD---SW-ESFFV----SVRKAIT-VLFFIG-VRCYEAYPNTS 318
Query: 219 YPLSWYKD 226
P S +D
Sbjct: 319 LPPSILED 326
>2qml_A BH2621 protein; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-2, unknown
function; HET: MSE; 1.55A {Bacillus halodurans}
Length = 198
Score = 38.6 bits (90), Expect = 8e-04
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 10/115 (8%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ ++ + NGV + Y +DI+A+ + I L
Sbjct: 60 HLQTFLNDDHQTLMVGAINGVPMS--------YWESYWVKEDIIANYYPFEEHDQGIHLL 111
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
++Y G+ LL ++ + I NK IH ++K F+
Sbjct: 112 IGPQEYLGQGLIYPLLLAIMQQK--FQEPDTNTIVAEPDRRNKKMIHVFKKCGFQ 164
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Length = 188
Score = 38.0 bits (88), Expect = 0.001
Identities = 26/138 (18%), Positives = 42/138 (30%), Gaps = 16/138 (11%)
Query: 30 KDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGV 89
+DI + + N I G IV ++ + I L
Sbjct: 63 EDIAKDYLYV---LEENDKIYGFIVV------DQDQAEWYDDIDWPVNREGAFVIHRLTG 113
Query: 90 SEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL--HSFL 147
S++Y G A+ L + +I + + I NKPA + K F +
Sbjct: 114 SKEY--KGAATELFNYVIDV---VKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLM 168
Query: 148 PYYYSIKGRSRDGFTYVL 165
Y KG + L
Sbjct: 169 EYPPYDKGEPFYAYYKNL 186
>3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus,
brucellosis, acyl CO-A, arylami transferase; 1.75A
{Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Length = 246
Score = 38.3 bits (89), Expect = 0.001
Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 35/132 (26%)
Query: 76 DKHIEVGYILSLGVSEDYRRNGIAS----LLLDNLISHLTTAENSSCKAIFLHVLTSNKP 131
+ IE+G I R A+ L + + L + N P
Sbjct: 124 NGVIEIGSIY---WGPLISRRPAATEAQFLFMQYVFDVL------GYRRYEWECHNENGP 174
Query: 132 AIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYINGGHAAWSLCDYVKHWCESLYSKE 191
+ E+ FR + +KGR+RD A +S+ D E
Sbjct: 175 SRRAAERFGFRFEGIFRQHMVVKGRNRD-----------TAWFSVLD-----------SE 212
Query: 192 FLSKKKGIRNWL 203
+ + K+ + WL
Sbjct: 213 WPALKQAYQAWL 224
>3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2,
protein structure initiativ midwest center for
structural genomics; HET: MSE; 2.30A {Colwellia
psychrerythraea}
Length = 276
Score = 37.5 bits (86), Expect = 0.002
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 10/91 (10%)
Query: 65 KEDKDILAS-----SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCK 119
+LA+ E + + V++ R GIA +L L H A
Sbjct: 186 WHKGKLLAAGECRLFDQYQTEYADL-GMIVAQSNRGQGIAKKVLTFLTKH---AATQGLT 241
Query: 120 AIFLHVLTSNKPAIHFYEKRRFRLHSFLPYY 150
+I ++N A F + +
Sbjct: 242 SI-CSTESNNVAAQKAIAHAGFTSAHRIVQF 271
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling;
HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB:
4avb_A* 4avc_A*
Length = 333
Score = 37.7 bits (87), Expect = 0.002
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146
V++ Y+ GI S L+ L A + +L+ N P ++
Sbjct: 240 VADAYQGRGIGSFLIGALSVA---ARVDGVERFAARMLSDNVPMRTIMDRYGAVWQRE 294
>1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related
N-acetyltransferase superfamily fold, NYSGXRC, PSI,
protein structure initiative; 2.00A {Bacillus subtilis}
SCOP: d.108.1.1
Length = 140
Score = 36.1 bits (84), Expect = 0.003
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHF 135
D + ++ I V + +R G+ +++ L A + L+ + A+ F
Sbjct: 63 DGYGKLERIC---VLKSHRSAGVGGIIMKALEKA---AADGGASGFILN---AQTQAVPF 113
Query: 136 YEKRRFRLHSFLPYY 150
Y+K +R+ S +
Sbjct: 114 YKKHGYRVLSEKEFL 128
>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5,
acetyltransferase, SGC, structural genomics, structural
genomics consortium; HET: ACO; 1.74A {Homo sapiens}
SCOP: d.108.1.1 PDB: 1cm0_B*
Length = 168
Score = 36.5 bits (84), Expect = 0.003
Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLT-SNKPAIHFYEKRRFR 142
I+ V+ + + G + L+++L + L+ LT +++ AI +++K+ F
Sbjct: 82 IVFCAVTSNEQVKGYGTHLMNHLKEYHIKHN-------ILYFLTYADEYAIGYFKKQGFS 134
Query: 143 LHSFLP 148
+P
Sbjct: 135 KDIKVP 140
>3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl
COA, N-acetyltransferase domain; HET: ACO; 1.46A
{Drosophila melanogaster}
Length = 215
Score = 37.0 bits (85), Expect = 0.003
Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSF 146
L V +YR GIA L + + + HVL S+ + EK F
Sbjct: 131 LSVDTNYRGLGIAGRLTERAYEY---MRENGINVY--HVLCSSHYSARVMEKLGFHEVFR 185
Query: 147 LPYY-YSIKGR 156
+ + Y +G
Sbjct: 186 MQFADYKPQGE 196
>3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase
(GNAT) family, structural joint center for structural
genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis}
Length = 249
Score = 37.0 bits (85), Expect = 0.003
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 6/70 (8%)
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
G + + EDYR G+A LI + ++ ++ EK +
Sbjct: 184 GIEIEVDTREDYRGLGLAKACAAQLILACLD------RGLYPSWDAHTLTSLKLAEKLGY 237
Query: 142 RLHSFLPYYY 151
L Y
Sbjct: 238 ELDKAYQAYE 247
>1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related
fold, structural genomics, PSI, protein structure
initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis}
SCOP: d.108.1.1
Length = 210
Score = 36.4 bits (84), Expect = 0.004
Identities = 17/116 (14%), Positives = 31/116 (26%), Gaps = 9/116 (7%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
L ++G G Y L KD+++ +D + +
Sbjct: 81 HLNAQLEGTYSLPLIGSWHGTDGG--------YLELYWAAKDLISHYYDADPYDLGLHAA 132
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
G LLL +++ + E C+ I N E +
Sbjct: 133 IADLSKVNRGFGPLLLPRIVASVFANEPR-CRRIMFDPDHRNTATRRLCEWAGCKF 187
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes
aegypti}
Length = 217
Score = 36.3 bits (83), Expect = 0.005
Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 29/135 (21%)
Query: 39 YSLAAL--YNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILS---------- 86
+ A IG+ +A +Q + ++ + K ++ +L+
Sbjct: 60 TVVVAEDSAAKKFIGVSIAGPIQPGDPDAMVEEAATTETKKWGDILKLLALLERTADVCG 119
Query: 87 ------------LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
L V YR + + LL + ++ K + ++ ++
Sbjct: 120 RYGLEKAYHVHILAVDPTYRGHSLGQRLLQFQMDL---SKKLGFK--AISGDFTSVFSVK 174
Query: 135 FYEKRRFRLHSFLPY 149
EK S L
Sbjct: 175 LAEKLGMECISQLAL 189
>1nsl_A Probable acetyltransferase; structural genomics, hexamer,
alpha-beta, PSI, protein struc initiative, midwest
center for structural genomics; 2.70A {Bacillus
subtilis} SCOP: d.108.1.1
Length = 184
Score = 36.1 bits (84), Expect = 0.005
Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 36/148 (24%)
Query: 26 LSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYIL 85
+ ++ ++ + LY+G + G+I SL+ D+ ++ E+GY +
Sbjct: 56 IPDWRRQYADLNGIEAGLLYDGSLCGMI--------SLHNLDQV------NRKAEIGYWI 101
Query: 86 SLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKA--------IFLHVLTSNKPAIHFYE 137
+ +++ GI + LI++ A + + N+ + E
Sbjct: 102 A----KEFEGKGIITAACRKLITY----------AFEELELNRVAICAAVGNEKSRAVPE 147
Query: 138 KRRFRLHSFLPYYYSIKGRSRDGFTYVL 165
+ F + G D Y L
Sbjct: 148 RIGFLEEGKARDGLYVNGMHHDLVYYSL 175
>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase,
COA binding protein; HET: EPE; 1.70A {Tetrahymena
thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A*
1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A*
Length = 160
Score = 35.6 bits (82), Expect = 0.005
Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
+ L V+ + + G + L++ H + + + + N AI +++K+
Sbjct: 71 RFAEVAFLAVTANEQVRGYGTRLMNKFKDH---MQKQNIEYLL--TYADNF-AIGYFKKQ 124
Query: 140 RFRLHSFLP 148
F +P
Sbjct: 125 GFTKEHRMP 133
>2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 1.40A {Xanthomonas campestris PV}
Length = 142
Score = 35.3 bits (81), Expect = 0.005
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
+ Y+ + V ++R G + L+D +++H + + L A
Sbjct: 63 ISDYATFAYLGDVFVLPEHRGRGYSKALMDAVMAH---PDLQGLRRFSLATSD----AHG 115
Query: 135 FYEKRRFR 142
Y + F
Sbjct: 116 LYARYGFT 123
>4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding;
1.80A {Aedes aegypti}
Length = 238
Score = 35.6 bits (81), Expect = 0.010
Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 5/67 (7%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
+ L V YR GIA+ +L I K + + + F+
Sbjct: 149 NAMGLSVDPKYRGRGIATEILRARIPL---CRAVGLKLSA--TCFTGPNSQTAATRVGFQ 203
Query: 143 LHSFLPY 149
+ Y
Sbjct: 204 EDFTITY 210
>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics,
unknown function; 1.80A {Bacillus subtilis} SCOP:
d.108.1.1
Length = 175
Score = 34.8 bits (81), Expect = 0.010
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 13/59 (22%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTS-----NKPAIHFYEKRRFR 142
+ E R G+ S LL + + + L + NKP++ +EK F
Sbjct: 89 IDEACRGKGVGSYLLQEALRI--------APNLGIRSLMAFIFGHNKPSLKLFEKHGFA 139
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine
sulfoximine; 2.35A {Acinetobacter baylyi}
Length = 182
Score = 34.5 bits (80), Expect = 0.013
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVL-----TSNKPAIHFYEKRRFR 142
+ +DYR G++ L++ LI +HV+ +N +I ++K F
Sbjct: 98 IHKDYRGLGLSKHLMNELIKR--------AVESEVHVMVGCIDATNVASIQLHQKLGFI 148
>2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest
center for struct genomics, MCSG, structural genomics,
unknown function; HET: EPE PG4; 2.40A {Enterococcus
faecalis} SCOP: d.106.1.4 d.108.1.10
Length = 400
Score = 35.5 bits (81), Expect = 0.014
Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 8/76 (10%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
+ I + +YR G S ++ +++ L + + L L
Sbjct: 72 HGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAK------QKVALSYLAPFSYP-- 123
Query: 135 FYEKRRFRLHSFLPYY 150
FY + + Y
Sbjct: 124 FYRQYGYEQTFEQAEY 139
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural
genomics, protein structure initiative, NYSGXRC, PSI;
2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Length = 175
Score = 34.5 bits (80), Expect = 0.014
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 13/59 (22%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVL-----TSNKPAIHFYEKRRFR 142
V +D R +GI L+ LI H +HVL N +I +E FR
Sbjct: 91 VHKDARGHGIGKRLMQALIDH--------AGGNDVHVLIAAIEAENTASIRLHESLGFR 141
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086,
structural genomics, center for STRU genomics of
infectious diseases; HET: MSE; 1.75A {Salmonella
typhimurium} PDB: 3dr8_A*
Length = 174
Score = 34.5 bits (80), Expect = 0.015
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 13/59 (22%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVL-----TSNKPAIHFYEKRRFR 142
V ++ G+ LL LI + HV+ + N +I + F
Sbjct: 90 VHPAHQGKGLGRKLLSRLIDE--------ARRCGKHVMVAGIESQNAASIRLHHSLGFT 140
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family,
phosphinothricin, methionine sulfone, methionine
sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A
2j8n_A 2j8r_A* 1yvo_A
Length = 172
Score = 34.5 bits (80), Expect = 0.015
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 13/59 (22%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVL-----TSNKPAIHFYEKRRFR 142
V +D R G+ LL LI +A LHV+ + N +I + + F
Sbjct: 90 VRDDQRGKGLGVQLLQALIER--------ARAQGLHVMVAAIESGNAASIGLHRRLGFE 140
>3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity,
resistance, A coenzyme A, transferase; HET: COA GSU;
1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A*
3r9g_A*
Length = 188
Score = 33.8 bits (78), Expect = 0.023
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 20/127 (15%)
Query: 39 YSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGI 98
L Y I G++ S N D +K +GY L +++ GI
Sbjct: 79 LILFIKYKTKIAGVV--------SFNIIDHA------NKTAYIGYWLG----ANFQGKGI 120
Query: 99 ASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSR 158
+ ++ LI ++ K + + NK + + F L L + G S
Sbjct: 121 VTNAINKLIQEY--GDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSY 178
Query: 159 DGFTYVL 165
D Y
Sbjct: 179 DQNIYSK 185
>3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics,
protein structure initiativ midwest center for
structural genomics; 2.75A {Bacillus anthracis}
Length = 388
Score = 34.4 bits (78), Expect = 0.032
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
+ ++G + + +YRR+G LL + + + + +L +
Sbjct: 70 GKEKFKMGGVAGVATYPEYRRSGYVKELLQHSLQTMKKDG------YTVSMLHPFAVS-- 121
Query: 135 FYEKRRFRLHSFLPYYY 151
FY K + L + L +
Sbjct: 122 FYRKYGWELCANLLVCH 138
>2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2,
structure initiative, midwest center for structural
genomic transferase; 2.30A {Enterococcus faecalis} SCOP:
d.106.1.4 d.108.1.10
Length = 406
Score = 32.9 bits (74), Expect = 0.077
Identities = 6/60 (10%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
++G + +G +Y +G+ L+ + + ++ L +
Sbjct: 85 HGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQ------DKQWISYLFPYNIPYY 138
>3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG,
structural genomics, midwest center for structural GE
protein structure initiative; HET: MSE; 2.00A {Vibrio
fischeri}
Length = 184
Score = 31.9 bits (73), Expect = 0.12
Identities = 18/91 (19%), Positives = 27/91 (29%), Gaps = 16/91 (17%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLH-----VLTSNKPAIH 134
VGY L +Y+ GI ++ I + A+N LH + N+ +
Sbjct: 98 HVGYSLD----SEYQGKGIMRRAVNVTIDWMFKAQN-------LHRIMAAYIPRNEKSAK 146
Query: 135 FYEKRRFRLHSFLPYYYSIKGRSRDGFTYVL 165
F Y I G D
Sbjct: 147 VLAALGFVKEGEAKKYLYINGAWEDHILTSK 177
>2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT)
family, structural genomics, joint center for struct
genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis}
SCOP: d.106.1.4 d.108.1.10
Length = 396
Score = 32.0 bits (72), Expect = 0.18
Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
+ + + I ++G++ +YR +G A L+ + + ++ + I + VL
Sbjct: 73 GGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTLQEISE------QDIPISVLYPATQR-- 124
Query: 135 FYEKRRFRLHSFLPYY 150
Y K + +
Sbjct: 125 LYRKAGYEQAGSSCVW 140
>3sxn_A Enhanced intracellular surviVal protein; GNAT fold,
acetyltransferase, acetyl COA binding, transferas; HET:
COA; 2.03A {Mycobacterium smegmatis}
Length = 422
Score = 32.0 bits (72), Expect = 0.19
Identities = 16/124 (12%), Positives = 41/124 (33%), Gaps = 19/124 (15%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
++ + E + + + +G + +Q L + + V I +
Sbjct: 57 AWRSMVPEDATVVVPDETDDAFVGQSLYLDMQ-----------LTVPGGEVLPVAGISFV 105
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147
V+ +RR G+ + L + L VLT+++ Y + + + +
Sbjct: 106 AVAPTHRRRGVLRAMYTELHDRIAR------AGYPLAVLTASEGG--IYGRFGYGVATIE 157
Query: 148 PYYY 151
+
Sbjct: 158 QHVS 161
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex,
transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae}
PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Length = 456
Score = 31.8 bits (73), Expect = 0.22
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
Query: 86 SLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
L VS + G LL ++I A +F L++N ++ +R F+
Sbjct: 376 CLAVSPQAQDGGYGERLLAHIIDK---ARGIGISRLF--ALSTN--TGEWFAERGFQ 425
>3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase,
transferase; HET: COA; 1.95A {Mycobacterium
tuberculosis}
Length = 428
Score = 31.2 bits (70), Expect = 0.27
Identities = 8/76 (10%), Positives = 24/76 (31%), Gaps = 8/76 (10%)
Query: 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHF 135
+ + + + V+ +RR G+ + L + + L +++
Sbjct: 100 EVVLPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIAD------SGYPVAALHASEGG--I 151
Query: 136 YEKRRFRLHSFLPYYY 151
Y + + + L
Sbjct: 152 YGRFGYGPATTLHELT 167
>1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP:
d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A
Length = 182
Score = 30.7 bits (70), Expect = 0.29
Identities = 21/127 (16%), Positives = 38/127 (29%), Gaps = 20/127 (15%)
Query: 39 YSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGI 98
+ G++ S N + +K +GY L E ++ GI
Sbjct: 71 KMYLIFCQNEMAGVL--------SFNAIEPI------NKAAYIGYWLD----ESFQGQGI 112
Query: 99 ASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSR 158
S L L++H A + + N+ + + F L + + G
Sbjct: 113 MSQSLQALMTHY--ARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYH 170
Query: 159 DGFTYVL 165
D Y
Sbjct: 171 DVNMYAR 177
>1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220,
structural genomics, PSI, protein structure initiative;
NMR {Bacillus subtilis subsp} SCOP: d.108.1.1
Length = 159
Score = 29.8 bits (67), Expect = 0.55
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLH--VLTSNKPAIHFYEKRRFR 142
S + R G+A +L ++I AE + + L + S +PA YE F+
Sbjct: 78 TSASHLRKGVAKQVLQHIIEE---AEKRGYERLSLETGSMASFEPARKLYESFGFQ 130
>3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG,
protein structure initiative, midwest for structural
genomics; HET: COA; 1.80A {Bacillus anthracis str}
Length = 168
Score = 29.5 bits (67), Expect = 0.61
Identities = 15/96 (15%), Positives = 25/96 (26%), Gaps = 14/96 (14%)
Query: 74 SFDKHIEVGYILSLGVSEDYRRNGIAS----LLLDNLISHLTTAENSSCKAIFLHVLTSN 129
+ E+G++ + Y G AS L + I N
Sbjct: 79 FGEHTYEIGWVFN----PKYFNKGYASEAAQATLKYGFKEM------KLHRIIATCQPEN 128
Query: 130 KPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVL 165
P+ EK R + D + Y +
Sbjct: 129 TPSYRVMEKIGMRREGYFKKCIPHGNEWWDEYYYAI 164
>3h0g_B DNA-directed RNA polymerase II subunit RPB2; transcription,
multi-protein complex, DNA- binding, magnesium; 3.65A
{Schizosaccharomyces pombe}
Length = 1210
Score = 28.7 bits (64), Expect = 1.9
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 56 EILQYTSLNKEDK---DILASSF-------DKHIEVGYI----LSLGVSEDYRRNGIASL 101
+IL++ + D +++ DK I + YI + GV+ + R +
Sbjct: 282 DILEHICYDPNDFQMLEMMKPCIEEAFVIQDKDIALDYIGKRGSTTGVTREKRLRYAHDI 341
Query: 102 LLDNLISHLTTAENS-SCKAIFL 123
L L+ H+TT E + KA FL
Sbjct: 342 LQKELLPHITTMEGFETRKAFFL 364
>1twf_B DNA-directed RNA polymerase II 140 kDa polypeptid; transcription,
mRNA, multiprotein complex; HET: UTP; 2.30A
{Saccharomyces cerevisiae} SCOP: e.29.1.1 PDB: 1i3q_B
1i6h_B 1k83_B* 1nik_B 1nt9_B 1pqv_B 1r5u_B 1r9s_B*
1r9t_B* 1sfo_B* 1twa_B* 1twc_B* 1i50_B* 1twg_B* 1twh_B*
1wcm_B 1y1v_B 1y1w_B 1y1y_B 1y77_B* ...
Length = 1224
Score = 28.7 bits (64), Expect = 2.4
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
Query: 56 EILQYTSLNKEDKDILA----------SSFDKHIEVGYI----LSLGVSEDYRRNGIASL 101
EIL++ + D +L D+ + +I +LG+ ++ R +
Sbjct: 296 EILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDI 355
Query: 102 LLDNLISHLTTAE-NSSCKAIFL 123
L + H+T E S KA FL
Sbjct: 356 LQKEFLPHITQLEGFESRKAFFL 378
>2fck_A Ribosomal-protein-serine acetyltransferase, putat;
ribosomal-protein structural genomics, PSI, protein
structure initiative; HET: MSE; 1.70A {Vibrio cholerae
o1 biovar eltor} SCOP: d.108.1.1
Length = 181
Score = 27.2 bits (61), Expect = 3.5
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 28/124 (22%)
Query: 46 NGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYRRNGIAS----L 101
++G++ ++N+ +GY + + Y+R G
Sbjct: 80 TQTLVGMV--------AINEFYHTF------NMASLGYWIG----DRYQRQGYGKEALTA 121
Query: 102 LLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGF 161
L+ L + + N P+ + P + G + G
Sbjct: 122 LILFCFERL------ELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGI 175
Query: 162 TYVL 165
+ L
Sbjct: 176 VFSL 179
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual
specificity phosphatase, nucleus, cytoplasm, rhodanese
domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Length = 153
Score = 26.3 bits (57), Expect = 7.3
Identities = 18/101 (17%), Positives = 27/101 (26%), Gaps = 24/101 (23%)
Query: 108 SHLTTAENSSCKAIFLHVLTSNKPAIH---FYEKRRFRLHSFLPYYYSIKGRS------- 157
SH+ A N +C + L +K I + + S
Sbjct: 36 SHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVVVYDQSSQDVASLS 95
Query: 158 ------------RDGFTYVLYINGGHAAWSLCDYVKHWCES 186
F V + GG A +S C + CE
Sbjct: 96 SDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRC-F-PGLCEG 134
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.138 0.432
Gapped
Lambda K H
0.267 0.0478 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,892,266
Number of extensions: 221448
Number of successful extensions: 699
Number of sequences better than 10.0: 1
Number of HSP's gapped: 600
Number of HSP's successfully gapped: 151
Length of query: 247
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 156
Effective length of database: 4,160,982
Effective search space: 649113192
Effective search space used: 649113192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.0 bits)