RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16746
(247 letters)
>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 308
Score = 59.0 bits (141), Expect = 7e-11
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHL-------TTAENSSCKAIFLHVLTSNK 130
H +G + LGV +R G+ +L I L T + + A+ L+V + N
Sbjct: 227 HPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNV 286
Query: 131 PAIHFYEKRRFRLHSFLPYYY 151
A+ Y+ F +S Y
Sbjct: 287 AAVRTYQSLGFTTYSVDTAYA 307
Score = 29.7 bits (65), Expect = 0.32
Identities = 19/155 (12%), Positives = 34/155 (21%), Gaps = 11/155 (7%)
Query: 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYE 137
G + L V RR GI + + ++ + PA
Sbjct: 69 RGAGGAMAELVVHPQSRRRGIGTAMARAALAKT-------AGRNQFWAHGTLDPARATAS 121
Query: 138 KRRFRLHSFLPYYYSIKGRSRDGFTYVLYINGGHAAWSLCDYVKHWCESLYSKEFLSKKK 197
L R +G + + F +
Sbjct: 122 ALGLVGVRELIQMR----RPLRDIPEPTIPDGVVIRTYAGTSDDAELLRVNNAAFAGHPE 177
Query: 198 GIRNWLVCIKYLKCQDWFPIDYPLSWYKDITSEPS 232
V + + + WF D + + D E
Sbjct: 178 QGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERP 212
>d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 297
Score = 58.5 bits (141), Expect = 9e-11
Identities = 7/71 (9%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
+ + L V R G+ LL + + ++ +N + ++
Sbjct: 224 DFSGLGMLQVLPKAERRGLGGLLAAAMSRE---IARGEEITLTAWIVATNWRSEALLKRI 280
Query: 140 RFRLHSFLPYY 150
++ +
Sbjct: 281 GYQKDLVNEWI 291
>d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase
AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]}
Length = 147
Score = 51.4 bits (122), Expect = 5e-09
Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 14/132 (10%)
Query: 20 HSGNYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHI 79
H + L+ ++I S A+ +GV IG A I +
Sbjct: 27 HPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYV-----------NGCDSS 75
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
V ++ + V +R+ G+A L+ + N C+ + N + ++
Sbjct: 76 PVVFLEGIFVLPSFRQRGVAKQLIAAVQRW---GTNKGCREMASDTSPENTISQKVHQAL 132
Query: 140 RFRLHSFLPYYY 151
F + +Y
Sbjct: 133 GFEETERVIFYR 144
>d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis
aries) [TaxId: 9940]}
Length = 166
Score = 51.5 bits (122), Expect = 6e-09
Identities = 20/119 (16%), Positives = 40/119 (33%), Gaps = 9/119 (7%)
Query: 24 YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83
L + + SL G ++ I+ + L +E + +
Sbjct: 36 LNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQES----LALHRPRGHSAH 91
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
+ +L V +R+ G S+LL + H+ + VL + FY++ F
Sbjct: 92 LHALAVHRSFRQQGKGSVLLWRYLHHVGAQPA-----VRRAVLMCEDALVPFYQRFGFH 145
>d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028
{Pyrococcus furiosus [TaxId: 2261]}
Length = 149
Score = 50.1 bits (119), Expect = 2e-08
Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 18/120 (15%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ ++ + +A ++G + I T ++++ YI +
Sbjct: 43 FESLLSQGEHKFFVALNERSELLGHVWICITLDTV--------------DYVKIAYIYDI 88
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147
V + R GI S LL A+ K I L V N PA+ +YE+R ++ + +
Sbjct: 89 EVVKWARGLGIGSALLRKAEEW---AKERGAKKIVLRVEIDN-PAVKWYEERGYKARALI 144
>d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945
{Enterococcus faecalis [TaxId: 1351]}
Length = 189
Score = 48.5 bits (114), Expect = 1e-07
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 81 VGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRR 140
Y+ ++ V E +R GI S LLD L A+ S +A+ L+V N A Y +
Sbjct: 111 EWYLDTISVDERFRGMGIGSKLLDALPEV---AKASGKQALGLNVDFDNPGARKLYASKG 167
Query: 141 FRLHSFLPYY 150
F+ + +
Sbjct: 168 FKDVTTMTIS 177
>d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 182
Score = 47.9 bits (113), Expect = 1e-07
Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFD-KHIEVGYILS 86
+ K S+ + IIG I ++K I + + +VG I
Sbjct: 57 FLKFRLSQEFDELYTYQKDNRIIGTIA-----LVYKRIKEKGIWWVPEELMNEKVGLIEF 111
Query: 87 LGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
V +++ GI S LL+ + L S K ++ + + ++Y K+ FR
Sbjct: 112 FVVDPEFQGKGIGSTLLEFAVKRL----RSLGKDPYVVTFPNLEAYSYYYMKKGFR 163
>d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase
{Serratia marcescens [TaxId: 615]}
Length = 137
Score = 46.9 bits (110), Expect = 2e-07
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 17/111 (15%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
+ ++ +F +LAA + + F++ YI L
Sbjct: 42 YLGNLLRSKTFIALAAFDQEAV--------------VGALAAYVLPKFEQPRSEIYIYDL 87
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEK 138
VS ++RR GIA+ L++ L A I++ + PA+ Y K
Sbjct: 88 AVSGEHRRQGIATALINLLKHE---ANALGAYVIYVQADYGDDPAVALYTK 135
>d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968
{Bacillus halodurans [TaxId: 86665]}
Length = 150
Score = 46.9 bits (110), Expect = 2e-07
Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 16/119 (13%)
Query: 24 YPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGY 83
+ +K+I + + + A I+G++ Y +
Sbjct: 38 SYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW-------------RAT 84
Query: 84 ILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
I + R GI S L+ I A+ C I L A+ FYE+ F+
Sbjct: 85 IEGVRTHSAARGQGIGSQLVCWAIER---AKERGCHLIQLTTDKQRPDALRFYEQLGFK 140
>d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus
[TaxId: 1396]}
Length = 152
Score = 45.1 bits (106), Expect = 1e-06
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
+ I+++ V+E + GI LL + + A+ + + S+ + Y+K
Sbjct: 58 KTMEIMNIAVAEHLQGKGIGKKLLRHAVET---AKGYGMSKLEVGTGNSSVSQLALYQKC 114
Query: 140 RFRLHSFLPYYYS 152
FR+ S Y+S
Sbjct: 115 GFRIFSIDFDYFS 127
>d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209
{Thermus thermophilus [TaxId: 274]}
Length = 174
Score = 43.0 bits (100), Expect = 7e-06
Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 5/96 (5%)
Query: 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAI 133
+ + ++ V ++R G+ L + + + VL N
Sbjct: 81 ASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARL---LQAEGYGRMLVWVLKENPKGR 137
Query: 134 HFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYING 169
FYE L + G Y + G
Sbjct: 138 GFYEHLGGVLLG--EREIELGGAKLWEVAYGFDLGG 171
>d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative
regulatory protein PaiA {Bacillus subtilis [TaxId:
1423]}
Length = 173
Score = 42.6 bits (99), Expect = 8e-06
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 15/129 (11%)
Query: 23 NYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVG 82
+ + S S ++ I G Y +N +D A S + E
Sbjct: 43 AFNTEQLEKELSNMSSQFFFIYFDHEIAG--------YVKVNIDD----AQSEEMGAESL 90
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
I + + ++++G+ LL+ I A + K I+L V N+ AI FY+K F
Sbjct: 91 EIERIYIKNSFQKHGLGKHLLNKAIEI---ALERNKKNIWLGVWEKNENAIAFYKKMGFV 147
Query: 143 LHSFLPYYY 151
+Y
Sbjct: 148 QTGAHSFYM 156
>d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase
{Enterococcus faecium [TaxId: 1352]}
Length = 180
Score = 42.2 bits (98), Expect = 1e-05
Identities = 19/142 (13%), Positives = 37/142 (26%), Gaps = 46/142 (32%)
Query: 35 EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYR 94
P ++AA+ ++G + + L V R
Sbjct: 42 NPERIAVAAVDQDELVG----------------FIGAIPQYGIT--GWELHPLVVESSRR 83
Query: 95 RNGIASLLLDNLISHLTTAENSSCKAIFL-------------------------HVLTSN 129
+N I + L++ L + I+L +
Sbjct: 84 KNQIGTRLVNYLEKE---VASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLR 140
Query: 130 KPAIHFYEKRRFRLHSFLPYYY 151
+ FYEK +++ LP
Sbjct: 141 EHPYEFYEKLGYKIVGVLPNAN 162
>d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone
acetyltransferase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 164
Score = 41.6 bits (97), Expect = 2e-05
Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 80 EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKR 139
E I+ +S + G + L+++L ++ + I + ++ AI +++K+
Sbjct: 72 EFAEIVFCAISSTEQVRGYGAHLMNHLKDYVR-----NTSNIKYFLTYADNYAIGYFKKQ 126
Query: 140 RFRLHSFLPYYYSIKGRSRDG 160
F L G +D
Sbjct: 127 GFTKEITLDKSI-WMGYIKDY 146
>d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244
{Enterococcus faecalis [TaxId: 1351]}
Length = 161
Score = 41.6 bits (96), Expect = 2e-05
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 82 GYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRF 141
++LS+GVS D++ GI L AE S + L V+ +N+ AI FYEK F
Sbjct: 79 QWLLSIGVSPDFQDQGIGG---SLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGF 135
Query: 142 RLHSFLPYYYSIKGRSRDGFTYVLYI 167
+ + I G D + Y +I
Sbjct: 136 VQEAHFKEEFYINGHYCDDYQYAYFI 161
>d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 156
Score = 40.0 bits (92), Expect = 6e-05
Identities = 21/78 (26%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAI 133
S Y+ L V+ +YR G LL L A + C + VL N+PAI
Sbjct: 71 STWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELARE---AVANDCGRLEWSVLDWNQPAI 127
Query: 134 HFYEKRRFRLHSFLPYYY 151
FY Y
Sbjct: 128 DFYRSIGALPQDEWVRYR 145
>d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161
{Staphylococcus aureus [TaxId: 1280]}
Length = 133
Score = 38.9 bits (90), Expect = 1e-04
Identities = 13/65 (20%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYE 137
V I+ + V + Y+ SL++++++ + +N S +++++ + ++ PA Y
Sbjct: 60 GGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKY---IKNVSVESVYVSL-IADYPADKLYV 115
Query: 138 KRRFR 142
K F
Sbjct: 116 KFGFM 120
>d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 137
Score = 38.6 bits (89), Expect = 2e-04
Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
++ L V Y+R GI S L+ + + + + + + +
Sbjct: 60 VGDGFSSVFVQDLIVLPSYQRQGIGSSLMKEALGN---FKEAYQVQLATE---ETEKNVG 113
Query: 135 FYEKRRFRLHS 145
FY F + S
Sbjct: 114 FYRSMGFEILS 124
>d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 157
Score = 38.5 bits (88), Expect = 2e-04
Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 17/134 (12%)
Query: 23 NYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVG 82
+Y ++ K + S A I+G IV + + S + VG
Sbjct: 40 DYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWF-------------SKYEGRIVG 86
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
I V + ++ GI LL + L I L V N A++ YEK F+
Sbjct: 87 AIHEFVVDKKFQGKGIGRKLLITCLDFL----GKYNDTIELWVGEKNYGAMNLYEKFGFK 142
Query: 143 LHSFLPYYYSIKGR 156
+ + R
Sbjct: 143 KVGKSGIWVRMIKR 156
>d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 181
Score = 38.6 bits (89), Expect = 2e-04
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 11/94 (11%)
Query: 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHF 135
+ GY+ + V D+R + S LLD + + A L L+S+ A
Sbjct: 73 GNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQ-------LGALSSSARARRL 125
Query: 136 YEKRRFRL----HSFLPYYYSIKGRSRDGFTYVL 165
Y R + S L ++ DG +VL
Sbjct: 126 YASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVL 159
>d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890)
{Bacillus subtilis [TaxId: 1423]}
Length = 152
Score = 38.2 bits (88), Expect = 3e-04
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
+ I+++ V E ++ G L+ + I A+ I + S+ +
Sbjct: 53 LKTRPQTVEIVNIAVKESLQKKGFGKQLVLDAIEK---AKKLGADTIEIGTGNSSIHQLS 109
Query: 135 FYEKRRFRLHSFLPYYYS 152
Y+K FR+ + ++
Sbjct: 110 LYQKCGFRIQAIDHDFFL 127
>d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 198
Score = 38.4 bits (88), Expect = 3e-04
Identities = 17/116 (14%), Positives = 29/116 (25%), Gaps = 9/116 (7%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
L ++G G Y L KD+++ +D + +
Sbjct: 72 HLNAQLEGTYSLPLIGSWHGTDGG--------YLELYWAAKDLISHYYDADPYDLGLHAA 123
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRL 143
G LLL ++ A C+ I N E +
Sbjct: 124 IADLSKVNRGFGPLLLPRIV-ASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKF 178
>d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase
GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 157
Score = 37.7 bits (86), Expect = 4e-04
Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 19/114 (16%)
Query: 29 YKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLG 88
+ + + + I + + G+I +
Sbjct: 53 EDKKIMQYNPMVIVDKRTETVAATGNIIIERK-------------IIHELGLCGHIEDIA 99
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
V+ Y+ G+ LL+D L++ + C I L ++ + FYEK F
Sbjct: 100 VNSKYQGQGLGKLLIDQLVTI---GFDYGCYKIILDC---DEKNVKFYEKCGFS 147
>d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus
subtilis [TaxId: 1423]}
Length = 155
Score = 36.2 bits (82), Expect = 0.001
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
+I G+ E YR G A L A + + + LHV N+ A YE+ F+
Sbjct: 89 FIYDFGLYEPYRGKGYAKQALAA---LDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQ 145
Query: 143 LHSF 146
Sbjct: 146 ETDV 149
>d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 35.1 bits (79), Expect = 0.003
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
Y+ V DYR GI S + L + A C ++ V N+P+I+FY++R
Sbjct: 88 YLEDFFVMSDYRGFGIGS---EILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGAS 144
Query: 143 LHSFLPYYY 151
S +
Sbjct: 145 DLSSEEGWR 153
>d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone
acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Length = 162
Score = 34.6 bits (79), Expect = 0.004
Identities = 18/126 (14%), Positives = 44/126 (34%), Gaps = 24/126 (19%)
Query: 23 NYPLSWYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVG 82
P + + +P +LA + +G +IG I +
Sbjct: 37 RMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMF------------------PTQGFT 78
Query: 83 YILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
I+ V+ + + G + L+++L + + + ++ AI +++K+ F
Sbjct: 79 EIVFCAVTSNEQVKGYGTHLMNHLKEY---HIKHNILYFLTYA---DEYAIGYFKKQGFS 132
Query: 143 LHSFLP 148
+P
Sbjct: 133 KDIKVP 138
>d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021
{Enterococcus faecalis [TaxId: 1351]}
Length = 285
Score = 35.2 bits (80), Expect = 0.004
Identities = 9/76 (11%), Positives = 22/76 (28%), Gaps = 8/76 (10%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
+ I + +YR G S ++ +++ L + + +
Sbjct: 68 HGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADL--------AKQKVALSYLAPFSYP 119
Query: 135 FYEKRRFRLHSFLPYY 150
FY + + Y
Sbjct: 120 FYRQYGYEQTFEQAEY 135
>d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 34.3 bits (77), Expect = 0.005
Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 91 EDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYY 150
+YR GI S ++ + A + C L VL N+ A+ Y+ + + +
Sbjct: 96 PEYRGQGIGSKIIKKVAEV---ALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGW 152
Query: 151 Y 151
+
Sbjct: 153 H 153
>d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI
{Bacillus licheniformis [TaxId: 1402]}
Length = 145
Score = 34.0 bits (77), Expect = 0.006
Identities = 14/111 (12%), Positives = 30/111 (27%), Gaps = 19/111 (17%)
Query: 35 EPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSLGVSEDYR 94
+ L Y G +I + +++ L + + + E YR
Sbjct: 35 LRGAFHLGGYYGGKLISIASFHQAEHSELQGQK-------------QYQLRGMATLEGYR 81
Query: 95 RNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHS 145
S L+ + ++ + A +Y+K F
Sbjct: 82 EQKAGSSLIKHAEEI---LRKRGADLLWCNA---RTSASGYYKKLGFSEQG 126
>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus
subtilis [TaxId: 1423]}
Length = 151
Score = 33.6 bits (76), Expect = 0.008
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 64 NKEDKDILASSFDKHI--EVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAI 121
E ++ K + G I S+ S + R G+A +L ++I AE + +
Sbjct: 51 AWEGDELAGCGALKELDTRHGEIKSMRTSASHLRKGVAKQVLQHIIEE---AEKRGYERL 107
Query: 122 FLH--VLTSNKPAIHFYEKRRFRLHSFLPYYY 151
L + S +PA YE F+ Y
Sbjct: 108 SLETGSMASFEPARKLYESFGFQYCEPFADYG 139
>d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas
syringae [TaxId: 317]}
Length = 170
Score = 33.8 bits (76), Expect = 0.009
Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 5/91 (5%)
Query: 74 SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAI 133
+ + L V R G+ L+ + + + + A
Sbjct: 80 QKPNGLNRAEVQKLMVLPSARGRGLG----RQLMDEVEQVAVKHKRGLLHLDTEAGSVAE 135
Query: 134 HFYEKRRFRLHSFLP-YYYSIKGRSRDGFTY 163
FY + LP Y + GR Y
Sbjct: 136 AFYSALAYTRVGELPGYCATPDGRLHPTAIY 166
>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 153
Score = 33.1 bits (74), Expect = 0.013
Identities = 7/34 (20%), Positives = 10/34 (29%)
Query: 118 CKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYY 151
+ + N+ A YE FR Y
Sbjct: 112 AVRMRVSTSVDNEVAQKVYESIGFREDQEFKNYT 145
>d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919
{Enterococcus faecalis [TaxId: 1351]}
Length = 157
Score = 32.0 bits (71), Expect = 0.036
Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
++ + ++ S +Y G SLL A + ++ +N I
Sbjct: 69 MEQEQDFVWLKRFATSPNYIAKGYGSLLFHE---LEKRAVWEGRRKMYAQTNHTNHRMIR 125
Query: 135 FYEKRRFRLHSFLPYYY 151
F+E + F
Sbjct: 126 FFESKGFTKIHESLQMN 142
>d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus
subtilis [TaxId: 1423]}
Length = 140
Score = 31.7 bits (71), Expect = 0.039
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Query: 70 ILASSFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSN 129
+ A + G + + V + +R G+ +++ L + +L +
Sbjct: 54 VGAGRWRMKDGYGKLERICVLKSHRSAGVGGIIMKALEKAA------ADGGASGFILNAQ 107
Query: 130 KPAIHFYEKRRFRLHSFLPYY 150
A+ FY+K +R+ S +
Sbjct: 108 TQAVPFYKKHGYRVLSEKEFL 128
>d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 163
Score = 31.6 bits (70), Expect = 0.050
Identities = 8/42 (19%), Positives = 14/42 (33%)
Query: 118 CKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRD 159
+ + N +I +E FR+ + GR D
Sbjct: 114 VHVLIAAIEAENTASIRLHESLGFRVVGRFSEVGTKFGRWLD 155
>d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353
{Enterococcus faecalis [TaxId: 1351]}
Length = 291
Score = 29.5 bits (65), Expect = 0.30
Identities = 8/76 (10%), Positives = 25/76 (32%), Gaps = 8/76 (10%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIH 134
++G + +G +Y +G+ L+ + + + I
Sbjct: 76 HGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEE--------MRQDKQWISYLFPYNIP 127
Query: 135 FYEKRRFRLHSFLPYY 150
+Y ++ + + S +
Sbjct: 128 YYRRKGWEIMSDKLSF 143
>d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine
acetyltransferase EF1086 {Enterococcus faecalis [TaxId:
1351]}
Length = 146
Score = 28.8 bits (63), Expect = 0.34
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 21/115 (18%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
K+ P + S +I Y + ++
Sbjct: 35 NLKESDQFPEWESAGIYDGNQLI--------GYAMYGRWQDGR-----------VWLDRF 75
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
+ + ++ G L+ L ++L V +N AI Y++ F
Sbjct: 76 LIDQRFQGQGYGKAACRLLMLKLIEKYQ--TNKLYLSVYDTNSSAIRLYQQLGFV 128
>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 150
Score = 28.9 bits (63), Expect = 0.35
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 109 HLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFR 142
A+ +++ SN A Y K ++
Sbjct: 106 VYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYK 139
>d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone
acetyltransferase {Tetrahymena thermophila [TaxId:
5911]}
Length = 162
Score = 28.5 bits (63), Expect = 0.42
Identities = 15/124 (12%), Positives = 37/124 (29%), Gaps = 24/124 (19%)
Query: 28 WYKDITSEPSFYSLAALYNGVIIGLIVAEILQYTSLNKEDKDILASSFDKHIEVGYILSL 87
K + + +IG I K + L
Sbjct: 37 IVKLVFDRHHESMVILKNKQKVIGGICFRQY------------------KPQRFAEVAFL 78
Query: 88 GVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFL 147
V+ + + G + L++ H + + + + + ++ AI +++K+ F +
Sbjct: 79 AVTANEQVRGYGTRLMNKFKDH---MQKQNIEYLLTY---ADNFAIGYFKKQGFTKEHRM 132
Query: 148 PYYY 151
P
Sbjct: 133 PQEK 136
>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis
[TaxId: 1423]}
Length = 157
Score = 27.0 bits (58), Expect = 1.5
Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 78 HIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYE 137
E YI GV D+R+ I L D I + C + NK +I ++
Sbjct: 65 DPETAYIHFSGVHPDFRKMQIGKQLYDVFIET---VKQRGCTRVKCVTSPVNKVSIAYHT 121
Query: 138 KRRFRLHSFLPYYYSI 153
K F + I
Sbjct: 122 KLGFDIEKGTKTVNGI 137
>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806
{Bacillus cereus [TaxId: 1396]}
Length = 140
Score = 26.8 bits (58), Expect = 1.5
Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Query: 66 EDKDILAS-SFDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLH 124
E+ I + + +I L V E R +G S LL + +
Sbjct: 47 EEGKIFGGVTGTMYFYHLHIDFLWVDESVRHDGYGSQLLHEIEGIAK-----EKGCRLIL 101
Query: 125 VLTSNKPAIHFYEKRRFRLHSFLPYYY 151
+ + + A FY+K +R + + +
Sbjct: 102 LDSFSFQAPEFYKKHGYREYGVVEDHP 128
>d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus
subtilis [TaxId: 1423]}
Length = 180
Score = 27.0 bits (58), Expect = 1.8
Identities = 7/48 (14%), Positives = 13/48 (27%)
Query: 118 CKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVL 165
+ + N+ + E+ F + G D Y L
Sbjct: 128 LNRVAICAAVGNEKSRAVPERIGFLEEGKARDGLYVNGMHHDLVYYSL 175
>d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine
acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]}
Length = 178
Score = 26.7 bits (57), Expect = 2.5
Identities = 6/48 (12%), Positives = 13/48 (27%)
Query: 118 CKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVL 165
+ + N P+ + P + G + G + L
Sbjct: 129 LTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSL 176
>d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 185
Score = 26.3 bits (58), Expect = 3.2
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 6/57 (10%)
Query: 75 FDKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKP 131
K + I L V + R + + LI +T + I+ + T+
Sbjct: 126 RGKQVPSVEINFLCVHKQLRSKRLTPV----LIKEIT--RRVNKCDIWHALYTAGIV 176
>d3elna1 b.82.1.19 (A:5-190) Cysteine dioxygenase type I {Rattus
norvegicus [TaxId: 10116]}
Length = 186
Score = 25.8 bits (56), Expect = 4.0
Identities = 12/68 (17%), Positives = 27/68 (39%)
Query: 89 VSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKPAIHFYEKRRFRLHSFLP 148
SE R + + D++ H + + A+ LH+ + H +++R +
Sbjct: 116 KSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPPFDTCHAFDQRTGHKNKVTM 175
Query: 149 YYYSIKGR 156
++S G
Sbjct: 176 TFHSKFGI 183
>d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast
(Candida albicans) [TaxId: 5476]}
Length = 165
Score = 25.1 bits (55), Expect = 5.9
Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKP 131
+K I+ I L + + R +A + LI +T + + I+ + T
Sbjct: 107 NKVIDSVEINFLCIHKKLRNKRLAPV----LIKEIT--RRVNKQNIWQALYTGGSI 156
>d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine
acetyltransferase RimL {Salmonella typhimurium [TaxId:
90371]}
Length = 174
Score = 25.3 bits (54), Expect = 6.2
Identities = 7/50 (14%), Positives = 14/50 (28%)
Query: 118 CKAIFLHVLTSNKPAIHFYEKRRFRLHSFLPYYYSIKGRSRDGFTYVLYI 167
+ + N+ + + F L + + G D Y I
Sbjct: 125 IRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARII 174
>d1m55a_ d.89.1.3 (A:) Replication protein Rep, nuclease domain
{Adeno-associated virus, aav-5 [TaxId: 272636]}
Length = 193
Score = 25.2 bits (55), Expect = 6.2
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Query: 160 GFTYVLYIN-GGHAAWSLCDYVKHWCESLYSKEFLSKKKGIRNWLVCIKYLK 210
F + G ++ L YV L F + I +W+ K K
Sbjct: 87 YFHLHTLVETSGISSMVLGRYVSQIRAQLVKVVFQGIEPQINDWVAITKVKK 138
>d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human
(Homo sapiens) [TaxId: 9606]}
Length = 141
Score = 24.7 bits (54), Expect = 8.3
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Query: 76 DKHIEVGYILSLGVSEDYRRNGIASLLLDNLISHLTTAENSSCKAIFLHVLTSNKP 131
D ++ I L V + R +A + LI +T + IF V T+
Sbjct: 83 DTEKKMVEINFLCVHKKLRSKRVAPV----LIREIT--RRVHLEGIFQAVYTAGVV 132
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.432
Gapped
Lambda K H
0.267 0.0550 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 985,833
Number of extensions: 45793
Number of successful extensions: 184
Number of sequences better than 10.0: 1
Number of HSP's gapped: 176
Number of HSP's successfully gapped: 54
Length of query: 247
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 164
Effective length of database: 1,268,006
Effective search space: 207952984
Effective search space used: 207952984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.2 bits)