Query psy16748
Match_columns 291
No_of_seqs 193 out of 1138
Neff 3.1
Searched_HMMs 29240
Date Fri Aug 16 20:59:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hgv_A Fumarase C, fumarate hy 100.0 3E-59 1E-63 453.3 7.7 167 67-245 33-211 (495)
2 3e04_A Fumarase, fumarate hydr 100.0 3.6E-57 1.2E-61 440.2 6.6 168 68-245 28-206 (490)
3 3gtd_A Fumarase C, fumarate hy 100.0 3.3E-56 1.1E-60 432.5 8.2 181 54-246 7-201 (482)
4 3ocf_A Fumarate lyase:delta cr 100.0 3.7E-51 1.3E-55 396.0 7.6 181 52-245 5-199 (478)
5 3r6q_A Aspartase; aspartate am 100.0 1.6E-47 5.5E-52 368.8 8.4 164 69-245 4-179 (468)
6 4adm_A Fumarase C, fumarate hy 100.0 2.5E-45 8.7E-50 356.5 7.6 165 67-245 29-200 (495)
7 1yfm_A Fumarase, YFUM; lyase, 100.0 5.8E-44 2E-48 345.9 6.7 167 69-245 27-204 (488)
8 1fur_A Fumarase C, FUMC; hydro 100.0 3.4E-41 1.2E-45 323.7 8.3 164 70-245 4-179 (467)
9 1jsw_A L-aspartase, L-aspartat 100.0 3.9E-40 1.3E-44 316.9 7.3 165 69-246 4-183 (478)
10 1vdk_A Fumarase C, fumarate hy 100.0 6.6E-40 2.3E-44 314.4 8.4 164 70-245 3-179 (466)
11 2e9f_A Argininosuccinate lyase 99.8 9.4E-22 3.2E-26 188.4 -1.0 139 85-246 3-149 (462)
12 1k7w_A Delta 2 crystallin; eye 99.8 2.1E-20 7.2E-25 179.4 -1.0 141 82-245 5-153 (468)
13 1tj7_A Argininosuccinate lyase 99.7 1.4E-18 4.6E-23 166.4 -1.1 138 86-245 2-147 (457)
14 1q5n_A 3-carboxy-CIS,CIS-mucon 99.6 1.1E-16 3.8E-21 152.6 -0.2 117 109-245 23-148 (454)
15 1dof_A Adenylosuccinate lyase; 99.6 1.2E-15 4E-20 143.9 5.4 111 109-245 21-134 (403)
16 3c8t_A Fumarate lyase; structu 99.5 1.9E-15 6.4E-20 144.2 2.7 114 109-245 23-142 (451)
17 1re5_A 3-carboxy-CIS,CIS-mucon 99.5 7E-16 2.4E-20 146.9 -0.5 116 109-246 21-145 (450)
18 2ptr_A Adenylosuccinate lyase; 99.5 3.8E-15 1.3E-19 142.7 2.9 136 84-245 12-162 (462)
19 2fel_A 3-carboxy-CIS,CIS-mucon 99.5 3.7E-15 1.3E-19 139.1 2.0 130 86-245 13-146 (359)
20 2pfm_A Adenylosuccinate lyase; 99.5 4E-15 1.4E-19 141.9 0.8 112 109-245 25-143 (444)
21 1c3c_A Protein (adenylosuccina 99.5 9.1E-15 3.1E-19 138.5 1.4 111 109-245 15-131 (429)
22 3bhg_A Adenylosuccinate lyase; 96.4 0.001 3.6E-08 63.8 2.1 135 85-245 16-165 (459)
23 4eei_A Adenylosuccinate lyase; 96.1 0.0017 6E-08 62.2 2.0 111 109-245 16-132 (438)
24 2qga_B Adenylosuccinate lyase; 94.4 0.01 3.5E-07 57.0 1.0 119 109-245 28-161 (465)
25 2j91_A Adenylosuccinate lyase; 91.3 0.097 3.3E-06 51.0 2.9 138 76-245 31-172 (503)
26 1yis_A Adenylosuccinate lyase; 82.8 0.83 2.8E-05 43.9 3.7 112 110-245 28-146 (478)
27 2lo3_A SAGA-associated factor 49.0 4.4 0.00015 28.6 0.4 14 4-17 19-32 (44)
28 1zfo_A LAsp-1; LIM domain, zin 46.9 7.4 0.00025 24.4 1.2 13 1-13 2-14 (31)
29 3fxd_A Protein ICMQ; helix bun 37.7 25 0.00085 26.0 3.0 45 132-185 5-50 (57)
30 1jw2_A Hemolysin expression mo 31.4 36 0.0012 26.1 3.1 31 132-163 35-69 (72)
31 2co8_A NEDD9 interacting prote 24.6 28 0.00097 25.0 1.4 28 3-30 16-45 (82)
32 3i3t_A Ubiquitin carboxyl-term 23.5 28 0.00096 29.9 1.4 23 3-25 227-255 (355)
33 1x4l_A Skeletal muscle LIM-pro 23.1 25 0.00087 24.2 0.9 28 3-30 6-38 (72)
34 3f6q_B LIM and senescent cell 22.8 34 0.0012 23.0 1.5 28 2-29 11-41 (72)
35 1wyh_A SLIM 2, skeletal muscle 22.4 42 0.0015 22.9 1.9 29 2-30 5-36 (72)
36 1x61_A Thyroid receptor intera 21.3 36 0.0012 23.3 1.3 28 3-30 6-36 (72)
37 1n0w_B Breast cancer type 2 su 20.3 22 0.00077 24.0 0.1 14 3-16 7-20 (35)
No 1
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-59 Score=453.29 Aligned_cols=167 Identities=46% Similarity=0.636 Sum_probs=158.4
Q ss_pred CCCcccccccCCccccCccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHH
Q psy16748 67 SSGYRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAAD 145 (291)
Q Consensus 67 ~~~~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~Acd 145 (291)
++++|+|+|+||+++||+|+|||+|||||++||+||| ++||++||+||++||||||+||.++| ||+++++||++||+
T Consensus 33 m~~~r~e~d~~g~~~vp~~~~~g~qt~ra~~nf~i~~--~~~~~~~i~a~~~vk~AaA~an~~lG~l~~~~a~aI~~A~~ 110 (495)
T 4hgv_A 33 MTSTRTETDTFGPIEVASDRYWGAQAQRSLGNFKIGW--EKQPLAIVRALGIVKQAAARANMALGRLDPAIGDAIVKAAQ 110 (495)
T ss_dssp --CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCCS--CBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred CCCCeeeecCCCCccCCCccchHHHHHHHHHccCCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 3579999999999999999999999999999999997 79999999999999999999999999 99999999999999
Q ss_pred HHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC-----------CCcccCCCcccccchhhHHHHhh
Q psy16748 146 EVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV-----------LGWFSQNGERLLFLPIADFWQLL 214 (291)
Q Consensus 146 EIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g-----------N~~qSsNdtfpt~mhia~~~e~~ 214 (291)
||++|++ +||||||+||||||||+|||+||||||||+|++|+++| |++|||||.|||+++|+.+.++.
T Consensus 111 ei~~g~~-~~~F~~d~~q~gsgt~~nmn~nevian~a~e~lg~~~g~~~~vhpnd~Vh~gqSsnDv~~TA~~l~~~~~~~ 189 (495)
T 4hgv_A 111 EVIDGKL-DEHFPLVVWQTGSGTQSNMNANEVVSNRAIELLGGVMGSKKPVHPNDHVNMSQSSNDTYPTAMHIACAERVI 189 (495)
T ss_dssp HHHTTSS-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTTTCSCCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCch-hhccchhhhhhccccccCcchhHHHHHHHHHHcCcccCCCCCCCHHHhccCCCChhhHHHHHHHHHHHHHHH
Confidence 9999999 99999999999999999999999999999999998876 89999999999999999999888
Q ss_pred chhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 215 NPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 215 ~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+.+ .+.|..|.++|..++++.+
T Consensus 190 ~~L---------~~~L~~L~~~L~~kA~~~~ 211 (495)
T 4hgv_A 190 HDL---------LPALKHLHKALEEKVKAFD 211 (495)
T ss_dssp HTH---------HHHHHHHHHHHHHHHHHHT
T ss_pred HHH---------HHHHHHHHHHHHHHHHHhc
Confidence 887 5688999999999988865
No 2
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.6e-57 Score=440.15 Aligned_cols=168 Identities=59% Similarity=0.818 Sum_probs=158.2
Q ss_pred CCcccccccCCccccCccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCHHhHHHHHHHHHHH
Q psy16748 68 SGYRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFGLDAKVADAISKAADEV 147 (291)
Q Consensus 68 ~~~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elGLd~ekA~AI~~AcdEI 147 (291)
+++|+|+|+||+++||+|+|||+|||||++||+|||..++||++||+||++||||||++|.++|||++++++|++|||||
T Consensus 28 ~~~r~e~D~~G~~~vp~~~~~g~qt~ra~~nf~i~~~~~~~~~~~i~a~~~vkkAaA~an~~~Gl~~~~a~aI~~a~~ev 107 (490)
T 3e04_A 28 NSFRIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAIMKAADEV 107 (490)
T ss_dssp -CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCSCGGGBCCHHHHHHHHHHHHHHHHHGGGGTCCHHHHHHHHHHHHHH
T ss_pred cCCCcccccCcCccCcchhhhhHHHHHHHHcccccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999865689999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC-----------CCcccCCCcccccchhhHHHHhhch
Q psy16748 148 ISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV-----------LGWFSQNGERLLFLPIADFWQLLNP 216 (291)
Q Consensus 148 i~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g-----------N~~qSsNdtfpt~mhia~~~e~~~~ 216 (291)
++|++ +++||||+||||||||+|||+||||+|||+|++|+++| |++|||||.|||+++|+.+.++...
T Consensus 108 ~~g~~-~~~Fp~~~~q~Gsgt~~nmn~NEvia~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~~~ 186 (490)
T 3e04_A 108 AEGKL-NDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEV 186 (490)
T ss_dssp HTTSC-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HcCCc-ccCCceeeecCCCCCcccccHHHHHHHHHHHHhCcccCCCCCCCcccccCCCCChhhHHHHHHHHHHHHHHHHH
Confidence 99999 99999999999999999999999999999999997665 6799999999999999999998777
Q ss_pred hhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 217 YLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 217 ~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+ .+.|..|.++|..++++.+
T Consensus 187 L---------~~~L~~L~~aL~~kA~e~~ 206 (490)
T 3e04_A 187 L---------LPGLQKLHDALDAKSKEFA 206 (490)
T ss_dssp H---------HHHHHHHHHHHHHHHHHTT
T ss_pred H---------HHHHHHHHHHHHHHHHHhh
Confidence 7 5688999999999988865
No 3
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=100.00 E-value=3.3e-56 Score=432.46 Aligned_cols=181 Identities=41% Similarity=0.557 Sum_probs=156.9
Q ss_pred hhhhhhHHHhhccC--CCcccccccCCccccCccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC
Q psy16748 54 HTLKTLKILVRMAS--SGYRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG 131 (291)
Q Consensus 54 ~~m~~~~~~~~m~~--~~~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG 131 (291)
|.|+++.-+-+.+. +++|+|+|+||+++||+|+|||+||+||++||+||| +++|++||+||+.||||||++|.++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~r~e~d~~g~~~vp~~~~~g~qt~Ra~~nf~i~~--~~~~~~~i~a~~~vk~AaA~an~~~G 84 (482)
T 3gtd_A 7 HHMGTLEAQTQGPGSMKNYRIESDSFGEIQIEEKFYWGAQTQRSLNNFKISK--QKMPKILIRALAILKKCAAQVNYEFG 84 (482)
T ss_dssp -----------------CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCCS--CBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccchhhhhccCCcccccCcCccccCCCccCCcccccCHHHHHHHHhccccC--CCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 45776554433222 358999999999999999999999999999999997 68999999999999999999999999
Q ss_pred -CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC-----------CCcccCCC
Q psy16748 132 -LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV-----------LGWFSQNG 199 (291)
Q Consensus 132 -Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g-----------N~~qSsNd 199 (291)
||++++++|++||+||++|++ +++||||+||||||||+|||+||||+|||+|++|+++| |++|||||
T Consensus 85 ~l~~~~a~aI~~a~~ev~~g~~-~~~fp~~~~q~gsGt~~Nmn~NevIa~ra~e~~G~~~g~~~~vHpndhVn~gqSsND 163 (482)
T 3gtd_A 85 DLEYKIATSIDKAIDRILAGEF-EDNFPLVVWQTGSGTQTNMNMNEVIASIANEELTGKKGGKFPVHPNDHVNKGQSSND 163 (482)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTT-TTSCCCBSSSCTTCHHHHHHHHHHHHHHHHHHHHSCCCSSSSSCCCCCCTTTCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCc-ccCCCeehhccCCCccccchHHHHHHHHHHHHhCcccCCcCcCCccccCCCCCChhh
Confidence 999999999999999999999 99999999999999999999999999999999997655 67999999
Q ss_pred cccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhcc
Q psy16748 200 ERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGEE 246 (291)
Q Consensus 200 tfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~~ 246 (291)
.|||+++++.+.++...+ .+.|..|.++|..++++.+.
T Consensus 164 ~~~Ta~~l~~~~~~~~~L---------~~~L~~L~~~L~~kA~e~~d 201 (482)
T 3gtd_A 164 SFPTAMHIATVLATKQQL---------IPALNNLLTYLQDKSKDWDK 201 (482)
T ss_dssp HHHHHHHHHHHHHHHHTH---------HHHHHHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHccC
Confidence 999999999999987766 56889999999999888653
No 4
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=100.00 E-value=3.7e-51 Score=395.98 Aligned_cols=181 Identities=33% Similarity=0.409 Sum_probs=152.9
Q ss_pred hhhhhhhhHHHhhccCCCcccccccCCccccCccCccchhhhhhhhccCCCCCCCcCC--HHHHHHHHHHHHHHHHHHHH
Q psy16748 52 HKHTLKTLKILVRMASSGYRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERMP--LPVITAMGTLKKAAAQVNKE 129 (291)
Q Consensus 52 ~~~~m~~~~~~~~m~~~~~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP--~elIrAla~VKkAAA~AN~e 129 (291)
|-|.|+++.-+-+..++.+|+|+|+||+++||+|+|||+||+||++||+||| +++| |++|+|++.||+|+|++|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~r~e~d~~g~~~vp~~~~yG~qt~Ra~~nf~i~~--~~~~~~~~~i~a~~~vk~A~A~an~~ 82 (478)
T 3ocf_A 5 HHHHMGTLEAQTQGPGSMTRREQDSLGERDIPMDAYFGIQTLRAVENFSLSD--VALNHIPALVRALAMVKKAAATANYK 82 (478)
T ss_dssp ------------------CEEEEETTEEEEECTTCSSCHHHHHHHHHCCCSS--CBGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhccCCCCCcccccccCCCccCCcccccCHHHHHHHHhccccC--CCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3456888776666556679999999999999999999999999999999998 4665 99999999999999999999
Q ss_pred cC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC-----------CCcccC
Q psy16748 130 FG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV-----------LGWFSQ 197 (291)
Q Consensus 130 lG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g-----------N~~qSs 197 (291)
+| ||++.+++|++||+||++|++ +++||+|+||+|+||++|||+||||+|||+|++|++.| |++|||
T Consensus 83 ~G~l~~~~a~aI~~a~~ei~~g~~-~~~f~~~~~q~g~gt~~nmnvnevia~~a~e~~G~~~G~~~~vHpndhVn~g~Ss 161 (478)
T 3ocf_A 83 LRQLPEPKYAAIVAACDDIIDGLL-MEQFVVDVFQGGAGTSSNMNANEVIANRALEHLGRPRGDYQTIHPNDDVNMSQST 161 (478)
T ss_dssp TTSSCHHHHHHHHHHHHHHHTTTT-GGGCCCBTTCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCcc-ccCCCcchhhccCCccccchHHHHHHHHHHHHhchhcCCCCccCCCCCCCCCCCh
Confidence 99 999999999999999999999 99999999999999999999999999999999997655 589999
Q ss_pred CCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 198 NGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 198 Ndtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
||.|||+++++.+..+. .+ .+.|..|.++|..|+++.+
T Consensus 162 NDv~~Ta~~L~~~~~l~-~L---------~~~L~~L~~~L~~kA~e~~ 199 (478)
T 3ocf_A 162 NDVYPTAVRLALLLSQN-QV---------QTALHRLIAAFEAKGREFA 199 (478)
T ss_dssp HHHHHHHHHHHHHHTHH-HH---------HHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHcc
Confidence 99999999999987774 45 5789999999999998865
No 5
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=100.00 E-value=1.6e-47 Score=368.79 Aligned_cols=164 Identities=41% Similarity=0.513 Sum_probs=154.1
Q ss_pred CcccccccCCccccCccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHH
Q psy16748 69 GYRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEV 147 (291)
Q Consensus 69 ~~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEI 147 (291)
.+|+|+|+||+++||+|+|||+||+||++||+||| ++||+++|+|++.||+|+|++|.++| |+++.+++|++||++|
T Consensus 4 ~~r~e~d~~g~~~vp~~~~yg~qt~ra~~nf~i~~--~~~~~~~i~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~~~i 81 (468)
T 3r6q_A 4 DVRIEKDFLGEKEIPKDAYYGVQTIRATENFPITG--YRIHPELIKSLGIVKKSAALANMEVGLLDKEVGQYIVKAADEV 81 (468)
T ss_dssp -CEEEEETTEEEEECTTCCCCHHHHHHHHHCCSSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred CCCCccccCCCccCCcccccCHHHHHHHHccccCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999997 79999999999999999999999999 9999999999999999
Q ss_pred HcCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC-----------CCcccCCCcccccchhhHHHHhhch
Q psy16748 148 ISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV-----------LGWFSQNGERLLFLPIADFWQLLNP 216 (291)
Q Consensus 148 i~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g-----------N~~qSsNdtfpt~mhia~~~e~~~~ 216 (291)
++|++ +++||+++||+|+||++|||+||||+|||+|++|...| |++|||||.|||+++++....+. .
T Consensus 82 ~~~~~-~~~f~~~~~~~g~gt~~nmnvnevia~~~~e~~G~~~g~y~~vHpndhVn~g~SsnDv~~Ta~~L~~r~~l~-~ 159 (468)
T 3r6q_A 82 IEGKW-NDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDAFPTATHIAVLSLLN-Q 159 (468)
T ss_dssp HTTTT-GGGCCSCSSCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHHHHH-H
T ss_pred HhCcc-ccCCCccHHhccccccccccHHHHHHHHHHHHhccccCCcCccCCccCCCCCCChHhHHHHHHHHHHHHHHH-H
Confidence 99999 99999999999999999999999999999999997654 47999999999999999987775 4
Q ss_pred hhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 217 YLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 217 ~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+ .+.|..|.++|..++++.+
T Consensus 160 l---------~~~L~~L~~~L~~~A~~~~ 179 (468)
T 3r6q_A 160 L---------IETTKYMQQEFMKKADEFA 179 (468)
T ss_dssp H---------HHHHHHHHHHHHHHHHHTT
T ss_pred H---------HHHHHHHHHHHHHHHHHcc
Confidence 5 5688999999999998865
No 6
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=100.00 E-value=2.5e-45 Score=356.50 Aligned_cols=165 Identities=39% Similarity=0.486 Sum_probs=152.0
Q ss_pred CCCcccccccCCccccCccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHH
Q psy16748 67 SSGYRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAAD 145 (291)
Q Consensus 67 ~~~~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~Acd 145 (291)
+..+|+|+|+||+++||+|+|||+||+|+++||+||+ ++||+++|+|++.||+|+|++|.++| |+++.+++|++||+
T Consensus 29 ~~~~r~e~d~~g~~~vp~~~~~G~~t~r~~~~F~is~--~~~~~~~I~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~~ 106 (495)
T 4adm_A 29 SANYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISG--RGLERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAA 106 (495)
T ss_dssp --CEEEEEETTEEEEEETTCSCCHHHHHHHHHCCSSS--CBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred hcccCCccCcCCCccCChhhhcCchhHHHHHhcCCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999997 58999999999999999999999999 99999999999999
Q ss_pred HHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC------CCcccCCCcccccchhhHHHHhhchhhh
Q psy16748 146 EVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV------LGWFSQNGERLLFLPIADFWQLLNPYLD 219 (291)
Q Consensus 146 EIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g------N~~qSsNdtfpt~mhia~~~e~~~~~~~ 219 (291)
+|++|++ +++||+++||+|+||++|||+||||+||| ++|+++- |++|||||.|||+++++...++...+
T Consensus 107 ei~~~~~-~~~f~~~~~q~g~gt~~nmnvnevia~ra--~lGG~~vH~~dhVn~g~SsNDv~~Ta~~L~lr~~l~~~l-- 181 (495)
T 4adm_A 107 EIADGQH-DDQFPIDVFQTGSGTSSNMNTNEVIASIA--AKGGVTLHPNDDVNMSQSSNDTFPTATHIAATEAAVAHL-- 181 (495)
T ss_dssp HHHTTSC-GGGCCCBSSSCTTCHHHHHHHHHHHHHHH--HHTTCCCCTTTTTTTTCCHHHHHHHHHHHHHHHHHHHTH--
T ss_pred HHHhCcc-cCCCCcchhhccccccccccHHHHHHHHH--HhCCCccCcccccCCCCChhhHHHHHHHHHHHHHHHHHH--
Confidence 9999999 99999999999999999999999999999 6663321 78999999999999999998887777
Q ss_pred hcccccchhhHhhhhhccCCCchhhc
Q psy16748 220 RRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 220 r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
.+.|..|.++|..++++.+
T Consensus 182 -------~~~L~~L~~~L~~kA~e~~ 200 (495)
T 4adm_A 182 -------IPALQQLHDALAAKALDWH 200 (495)
T ss_dssp -------HHHHHHHHHHHHHHHHHTT
T ss_pred -------HHHHHHHHHHHHHHHHHcc
Confidence 5688999999999988865
No 7
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=100.00 E-value=5.8e-44 Score=345.91 Aligned_cols=167 Identities=54% Similarity=0.764 Sum_probs=152.0
Q ss_pred CcccccccCCccccCccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHH
Q psy16748 69 GYRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEV 147 (291)
Q Consensus 69 ~~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEI 147 (291)
.||+|+|+||+++||+|+|||+||+|+++||+||+..+++|+++|+|++.||+|+|++|.++| |+++.+++|++||+||
T Consensus 27 ~~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~~~~~~~~~~i~a~~~v~~A~A~a~~~~Gil~~~~a~aI~~a~~ei 106 (488)
T 1yfm_A 27 SFRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEV 106 (488)
T ss_dssp CEEEECSSSCCEEEESSCCCCHHHHHHHTTCCTTGGGGBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred ccCcccccCCCcCCCccchhchHHHHHHHhccCCCCcccCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 389999999999999999999999999999999973238999999999999999999999999 9999999999999999
Q ss_pred HcCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC----------CCcccCCCcccccchhhHHHHhhchh
Q psy16748 148 ISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV----------LGWFSQNGERLLFLPIADFWQLLNPY 217 (291)
Q Consensus 148 i~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g----------N~~qSsNdtfpt~mhia~~~e~~~~~ 217 (291)
++|++ +++||+++||||+||++|||+||||||+|+|++|++.| |.+|||||.|||+++++....+.+.+
T Consensus 107 ~~~~~-~~~f~~~~~q~g~~t~~nmn~~evia~~a~e~lG~~~g~~~vHp~d~Vn~g~SsNDv~~Ta~~L~lr~~l~~~l 185 (488)
T 1yfm_A 107 ASGKL-DDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNEL 185 (488)
T ss_dssp HHTSS-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHC---------CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHTTH
T ss_pred Hhccc-ccCCCcchhhccccccccccHHHHHHHHHHHHhCccccCCccCcccCcCCCCChhhHHHHHHHHHHHHHHHHHH
Confidence 99999 99999999999999999999999999999999986554 69999999999999999988887677
Q ss_pred hhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 218 LDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 218 ~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
.+.|..|.++|..++++.+
T Consensus 186 ---------~~~L~~L~~~L~~~A~e~~ 204 (488)
T 1yfm_A 186 ---------IPELTNLKNALEAKSKEFD 204 (488)
T ss_dssp ---------HHHHHHHHHHHHHHHHHTT
T ss_pred ---------HHHHHHHHHHHHHHHHHhc
Confidence 5688999999999998865
No 8
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=100.00 E-value=3.4e-41 Score=323.74 Aligned_cols=164 Identities=41% Similarity=0.568 Sum_probs=154.2
Q ss_pred cccccccCCccccCccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHH
Q psy16748 70 YRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVI 148 (291)
Q Consensus 70 ~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi 148 (291)
+|+|+|+||+++||+++|||+||+|+++||+||+ .+|++.+|++++.||+|+|.+|.++| |+++.+++|++||++|+
T Consensus 4 ~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~--~~~~~~~i~a~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~ 81 (467)
T 1fur_A 4 VRSEKDSMGAIDVPADKLWGAQTQRSLEHFRIST--EKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVL 81 (467)
T ss_dssp CEEEEETTEEEEECTTCCCCHHHHHHHHHCCCSS--CBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred cCccccCCCCccCCcccccchhhHHHHHhccCCC--ccCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999996 67899999999999999999999999 99999999999999999
Q ss_pred cCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC-----------CCcccCCCcccccchhhHHHHhhchh
Q psy16748 149 SGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV-----------LGWFSQNGERLLFLPIADFWQLLNPY 217 (291)
Q Consensus 149 ~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g-----------N~~qSsNdtfpt~mhia~~~e~~~~~ 217 (291)
+|++ +++||+++||+|+||++|||+||||||+|.|++|++.| |.++||||.+||++++.....+...+
T Consensus 82 ~~~~-~~~f~~~~~q~g~~~~~~mn~~~via~~a~e~~G~~~g~~~~lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~~~l 160 (467)
T 1fur_A 82 AGQH-DDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL 160 (467)
T ss_dssp TTTT-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCSSTTCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHTH
T ss_pred hccc-cccccchhhhccccccccccHHHHHHHHHHHHhCcccccccccCchhhcccCCChhhHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999999999999996654 49999999999999999888877656
Q ss_pred hhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 218 LDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 218 ~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
.+.|..|.++|..++++.+
T Consensus 161 ---------~~~l~~L~~~L~~~A~~~~ 179 (467)
T 1fur_A 161 ---------IPQLKTLTQTLNEKSRAFA 179 (467)
T ss_dssp ---------HHHHHHHHHHHHHHHHHTT
T ss_pred ---------HHHHHHHHHHHHHHHHHhc
Confidence 5688999999999988865
No 9
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=3.9e-40 Score=316.88 Aligned_cols=165 Identities=35% Similarity=0.485 Sum_probs=153.7
Q ss_pred CcccccccCCccccCccCccchhhhhhhhccCCCCCCCcC--CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHH
Q psy16748 69 GYRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERM--PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAAD 145 (291)
Q Consensus 69 ~~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~m--P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~Acd 145 (291)
.||+|+|+||+++||.|+|||+||+|+++||+||+ .++ |+.+|++++.||+|+|++|.++| |+++.+++|++||+
T Consensus 4 ~~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~--~~~~~~~~~i~~~~~ve~A~a~a~~~~Gii~~~~a~~I~~a~~ 81 (478)
T 1jsw_A 4 NIRIEEDLLGTREVPADAYYGVHTLRAIENFYISN--NKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACD 81 (478)
T ss_dssp SEEEEECSSCEEEEESSCCCCHHHHHHHHHCCSCS--CCSCCTTSHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred CcCcccccCCCcCCCCccccchHHHHHHHhCCCcC--ccccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 38999999999999999999999999999999996 688 99999999999999999999999 99999999999999
Q ss_pred HHH-cCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC-----------CCcccCCCcccccchhhHHHHh
Q psy16748 146 EVI-SGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV-----------LGWFSQNGERLLFLPIADFWQL 213 (291)
Q Consensus 146 EIi-~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g-----------N~~qSsNdtfpt~mhia~~~e~ 213 (291)
+|+ +|.. .++||+++||||+||++|||+||||+|++.|++|++.| |.++||||.+||++++...-.+
T Consensus 82 ~i~~~~~~-~~~f~v~~~~~g~~~~~~mnv~~vIa~~~~e~~g~~~g~~~~lHpnd~Vn~g~SsnDv~~Ta~~L~lr~~l 160 (478)
T 1jsw_A 82 EVLNNGKC-MDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL 160 (478)
T ss_dssp HHSTTTCS-TTCCCCCSSCCSTTHHHHHHHHHHHHHHHHHTTTSCCTTSCSSCCCCCCSCSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcchh-ccCCccchhhccCcccccccHHHHHHHHHHHHcCccccccccccccccccCCCChhhHHHHHHHHHHHHHH
Confidence 999 9999 99999999999999999999999999999999986544 4899999999999999888777
Q ss_pred hchhhhhcccccchhhHhhhhhccCCCchhhcc
Q psy16748 214 LNPYLDRRNKKNVDENVLNLSSAGSSDSEEGEE 246 (291)
Q Consensus 214 ~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~~ 246 (291)
..+ .+.|..|.++|..++++.+.
T Consensus 161 -~~l---------~~~L~~L~~~L~~~A~~~~~ 183 (478)
T 1jsw_A 161 -IKL---------VDAINQLREGFERKAVEFQD 183 (478)
T ss_dssp -HHH---------HHHHHHHHHHHHHHHHHGGG
T ss_pred -HHH---------HHHHHHHHHHHHHHHHHhhC
Confidence 566 56889999999999988653
No 10
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=100.00 E-value=6.6e-40 Score=314.41 Aligned_cols=164 Identities=50% Similarity=0.657 Sum_probs=152.3
Q ss_pred cccccccCCccccCccCccchhhhhhhhccCCCCCCCcC--CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHH
Q psy16748 70 YRIEADTFGELQVPNDKYYGAQTVRSTINFPIGGETERM--PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADE 146 (291)
Q Consensus 70 ~RiE~DsLGev~VP~daYYGaQTqRAleNF~Isg~~e~m--P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdE 146 (291)
+|+|+|+||+++||+++|||+||+|+++||+||+ .++ ++.+|++++.||+|+|++|.++| |+++.+++|++||++
T Consensus 3 ~r~e~d~~g~~~vp~~~~~g~~t~~~~~~f~~s~--~~~~~~~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~ 80 (466)
T 1vdk_A 3 YRIERDTMGEVRVPADKYWGAQTQRSLENFRIGT--DRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKAIIQAAEE 80 (466)
T ss_dssp -CEEEETTEEEECCTTCCCCHHHHHHHHHCCSST--TTCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred ccccccCCCCcCCCcccccchhhHHHHHhccCCC--ccccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999996 566 99999999999999999999999 999999999999999
Q ss_pred HHcCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC----------CCcccCCCcccccchhhHHHHhhch
Q psy16748 147 VISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV----------LGWFSQNGERLLFLPIADFWQLLNP 216 (291)
Q Consensus 147 Ii~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g----------N~~qSsNdtfpt~mhia~~~e~~~~ 216 (291)
|++|++ .++||+++||+|+||++|||+||||||+|.|++|.+.| |.++||||.+||++++...-.+.+.
T Consensus 81 i~~~~~-~~~f~~~~~q~~~~~~~~mn~~~via~~a~e~~g~~~g~~~lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~~~ 159 (466)
T 1vdk_A 81 VVQGKW-DDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSKYAHPNDHVNRGQSSNDTFPTAMYVAVALALHQR 159 (466)
T ss_dssp HHTTTT-GGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhccc-ccCCCchhhhccccccccccHHHHHHHHHHHHhCccccccccccccCcCCCCChhhHHHHHHHHHHHHHHHHH
Confidence 999999 99999999999999999999999999999999986543 5999999999999999988777756
Q ss_pred hhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 217 YLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 217 ~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+ .+.|..|.++|..++++.+
T Consensus 160 l---------~~~l~~L~~~L~~~A~~~~ 179 (466)
T 1vdk_A 160 L---------YPAVEGLIRTFTAKAQAFD 179 (466)
T ss_dssp H---------HHHHHHHHHHHHHHHHHTT
T ss_pred H---------HHHHHHHHHHHHHHHHHcc
Confidence 6 5688999999999888865
No 11
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=99.81 E-value=9.4e-22 Score=188.45 Aligned_cols=139 Identities=17% Similarity=0.084 Sum_probs=118.7
Q ss_pred cCccch----hhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCccc
Q psy16748 85 DKYYGA----QTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPL 159 (291)
Q Consensus 85 daYYGa----QTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPL 159 (291)
++|||. ||+|+++||++|+ ++|+.||++++.||+|+|.+|.++| |+++.+++|.+||++|.++.. .++||+
T Consensus 3 ~~~~g~r~~~~t~~~~~~f~~s~---~~d~~l~~~~i~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~-~~~f~~ 78 (462)
T 2e9f_A 3 HRTWGGRFGEGPDALAARFNASL---AFDRALWREDLWQNRVHARMLHAVGLLSAEELEAILKGLDRIEEEIE-AGTFPW 78 (462)
T ss_dssp -----------CCSHHHHHHCCH---HHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH-HTCSCC
T ss_pred ccccCCccchhhHHHHHhccCCC---ccCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHh-cccCCc
Confidence 689999 9999999999994 7889999999999999999999999 999999999999999999988 999999
Q ss_pred ccccCCchhhcCCChHHHHHHHHHHHhCCCCC---CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhc
Q psy16748 160 VIWQTGSGTQTNMNTNEVISNRAIEILGKNTV---LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSA 236 (291)
Q Consensus 160 dvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g---N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~ 236 (291)
++ +|+++|||++ +++.|++| +.| -.++||||.+||++++...-.+. .+ .+.|..|.++
T Consensus 79 ~~----~~~dv~~~~~----~~l~e~~g-~~g~~vH~g~SsnDv~~Ta~~l~lr~~l~-~l---------~~~l~~L~~~ 139 (462)
T 2e9f_A 79 RE----ELEDVHMNLE----ARLTELVG-PPGGKLHTARSRNDQVATDLRLYLRGAID-EL---------LALLLALRRV 139 (462)
T ss_dssp CG----GGCSHHHHHH----HHHHHHHC-TTHHHHTTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHH
T ss_pred CC----CCCchHHHHH----HHHHHHcc-ccccceecCCChhhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHH
Confidence 88 5999999996 67888887 445 89999999999999998887774 55 5688999999
Q ss_pred cCCCchhhcc
Q psy16748 237 GSSDSEEGEE 246 (291)
Q Consensus 237 ~~~~~e~~~~ 246 (291)
|..++++.+.
T Consensus 140 L~~~A~~~~~ 149 (462)
T 2e9f_A 140 LVREAEKHLD 149 (462)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHccC
Confidence 9999888653
No 12
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=99.77 E-value=2.1e-20 Score=179.39 Aligned_cols=141 Identities=14% Similarity=0.030 Sum_probs=117.7
Q ss_pred cCccCccch----hhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCC
Q psy16748 82 VPNDKYYGA----QTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEH 156 (291)
Q Consensus 82 VP~daYYGa----QTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dq 156 (291)
-|.++|||. +|+|+++||.||+ ++++.+|+++..||+|+|.+|.++| |+++.+++|.+||++|.++.. .++
T Consensus 5 ~~~~~~~~~r~~~~~~~~~~~f~~s~---~~d~~~~~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~-~~~ 80 (468)
T 1k7w_A 5 ARGDKLWGGRFSGSTDPIMEKLNSSI---AYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILSGLEKISEEWS-KGV 80 (468)
T ss_dssp --------------CCHHHHHHHCCH---HHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH-HTC
T ss_pred CCcccccccccchhHHHHHHHccCCC---cccHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhh-ccc
Confidence 466789998 9999999999994 7888999999999999999999999 999999999999999999888 899
Q ss_pred cccccccCCchhhcCCChHHHHHHHHHHHhCCCCC---CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhh
Q psy16748 157 FPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV---LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNL 233 (291)
Q Consensus 157 FPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g---N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l 233 (291)
||+++ +|+++|||+ .+++.|++| +.| -.++||||.+||++++...-.+. .+ .+.|..|
T Consensus 81 f~~~~----~~~dv~m~~----~~~l~e~~g-~~g~~vH~g~SsnDv~~Ta~~l~lr~~l~-~l---------~~~L~~L 141 (468)
T 1k7w_A 81 FVVKQ----SDEDIHTAN----ERRLKELIG-DIAGKLHTGRSRNDQVVTDLKLFMKNSLS-II---------STHLLQL 141 (468)
T ss_dssp CCCCT----TCCSHHHHH----HHHHHHHHC-GGGGGGGTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHH
T ss_pred CccCC----CCCchHHHH----HHHHHHHcc-ccccceecCCChhhHHHHHHHHHHHHHHH-HH---------HHHHHHH
Confidence 99988 599999998 678888887 444 88999999999999998887774 55 5688999
Q ss_pred hhccCCCchhhc
Q psy16748 234 SSAGSSDSEEGE 245 (291)
Q Consensus 234 ~~~~~~~~e~~~ 245 (291)
.++|..++++.+
T Consensus 142 ~~~L~~~A~~~~ 153 (468)
T 1k7w_A 142 IKTLVERAAIEI 153 (468)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcc
Confidence 999999988865
No 13
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=99.69 E-value=1.4e-18 Score=166.45 Aligned_cols=138 Identities=12% Similarity=0.007 Sum_probs=120.6
Q ss_pred Cccch----hhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccc
Q psy16748 86 KYYGA----QTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLV 160 (291)
Q Consensus 86 aYYGa----QTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLd 160 (291)
+|||. +|.+.+++|.+| ...+..+|++...+++|+|.+|.++| |+++.+++|.+||++|.++.. .++||++
T Consensus 2 ~~~~gr~~~~~~~~~~~f~~s---~~~d~~l~~~~i~~~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~-~~~~~~~ 77 (457)
T 1tj7_A 2 ALWGGRFTQAADQRFKQFNDS---LRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVR-ARPQQIL 77 (457)
T ss_dssp -CCCTTCSSCCCHHHHHHHCC---HHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH-HCGGGGG
T ss_pred cccccccccchHHHHHHHhcC---hhhhHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHh-cCCcCcC
Confidence 36777 999999999987 35567899999999999999999999 999999999999999998888 8999999
Q ss_pred cccCCchhhcCCChHHHHHHHHHHHhCCCCC---CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhcc
Q psy16748 161 IWQTGSGTQTNMNTNEVISNRAIEILGKNTV---LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAG 237 (291)
Q Consensus 161 vfQgGSGTSTNMNVNEVIANRA~EiLG~~~g---N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~ 237 (291)
++ +||++|||+| +++.|++|. .| -.++||||.+||++++...-.+. .+ .+.|..|.++|
T Consensus 78 ~~---~~~dv~~~v~----~~l~e~~g~-~g~~vH~g~SsnD~~~Ta~~l~lr~~l~-~l---------~~~l~~l~~~L 139 (457)
T 1tj7_A 78 ES---DAEDIHSWVE----GKLIDKVGQ-LGKKLHTGRSRNDQVATDLKLWCKDTVS-EL---------LTANRQLQSAL 139 (457)
T ss_dssp GS---CCSSHHHHHH----HHHHHHHGG-GGGGTTTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHH
T ss_pred CC---CCCcHHHHHH----HHHHHHccc-cccceecCCChhhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHH
Confidence 85 8999999999 577777773 33 89999999999999998887774 55 56889999999
Q ss_pred CCCchhhc
Q psy16748 238 SSDSEEGE 245 (291)
Q Consensus 238 ~~~~e~~~ 245 (291)
..++++.+
T Consensus 140 ~~~A~~~~ 147 (457)
T 1tj7_A 140 VETAQNNQ 147 (457)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHcc
Confidence 98888764
No 14
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=99.58 E-value=1.1e-16 Score=152.56 Aligned_cols=117 Identities=15% Similarity=0.055 Sum_probs=103.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHH--HHH
Q psy16748 109 PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRA--IEI 185 (291)
Q Consensus 109 P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA--~Ei 185 (291)
++.+|++++.||+|+|++|.++| |+++.+++|.+||+||. | +|+++.||+|+|| |.|||||+++ .|+
T Consensus 23 d~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~-~-----~~~~~~~~~~~~~----~~~dVia~~~~l~e~ 92 (454)
T 1q5n_A 23 DRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAI-D-----KIDFDALATATGL----AGNIAIPFVKQLTAI 92 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTHH-H-----HCCHHHHHHHHHH----HSSSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhh-h-----cCCHHHHHHHhhc----cCCcHHHHHHHHHHH
Confidence 57999999999999999999999 99999999999999985 3 5669999999999 8899999999 599
Q ss_pred hC---CCCC---CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 186 LG---KNTV---LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 186 LG---~~~g---N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+| ++.| +.++||||.+||++++...-.+. .+ .+.|..|.++|..++++.+
T Consensus 93 ~g~~~g~~~~~vH~g~SsnD~~~Ta~~L~~r~~l~-~l---------~~~l~~L~~~L~~~A~~~~ 148 (454)
T 1q5n_A 93 VKDADEDAARYVHWGATSQDILDTACILQCRDALA-IV---------QNQVQQCYETALSQAQTYR 148 (454)
T ss_dssp HHTTCTTGGGGTTTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHTT
T ss_pred hccccCCccccccCCCChhhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHhc
Confidence 95 3333 99999999999999998887775 55 5688999999999988865
No 15
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=99.57 E-value=1.2e-15 Score=143.94 Aligned_cols=111 Identities=13% Similarity=-0.014 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHH--HHH
Q psy16748 109 PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRA--IEI 185 (291)
Q Consensus 109 P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA--~Ei 185 (291)
++.+|++++.||+|+|.+|.++| |+++.+++|.+| +|+++.||+|+|| |.|||||+++ .|+
T Consensus 21 d~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a------------~~d~~~~~~~~~~----~~~dVia~~~~l~e~ 84 (403)
T 1dof_A 21 NEAIINAYLEVERALVCALEELGVAERGCCEKVNKA------------SVSADEVYRLERE----TGHDILSLVLLLEQK 84 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHC------------CCCTTTC------------CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC------------CCCHHHHHHHhhc----cCCcHHHHHHHHHHH
Confidence 68999999999999999999999 999999999977 5679999999999 7899999999 599
Q ss_pred hCCCCCCCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 186 LGKNTVLGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 186 LG~~~gN~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+|++.-+.+|||||.+||++++...-.+. .+ .+.|..|.++|..++++.+
T Consensus 85 ~Gg~~vH~g~SsnD~~~Ta~~l~~r~~l~-~l---------~~~l~~L~~~L~~~A~~~~ 134 (403)
T 1dof_A 85 SGCRYVHYGATSNDIIDTAWALLIRRALA-AV---------KEKARAVGDQLASMARKYK 134 (403)
T ss_dssp HCCSCTTTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHTT
T ss_pred cCCCcccCCCChhhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHhc
Confidence 98545599999999999999999887775 55 5688999999999998865
No 16
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=99.53 E-value=1.9e-15 Score=144.21 Aligned_cols=114 Identities=10% Similarity=-0.060 Sum_probs=101.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHH--HHH
Q psy16748 109 PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRA--IEI 185 (291)
Q Consensus 109 P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA--~Ei 185 (291)
++.+|++++.||+|+|++|.++| |+++.+++|.+||++ + +|+++.||+|+|| |.|||||+++ .|+
T Consensus 23 d~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~---~-----~~~~~~~~~~~~~----~~~dVia~~~~l~e~ 90 (451)
T 3c8t_A 23 AQSFISRCVETEVALARAQARLGIIPEDAAAGITAAART---F-----APEMERLRDDTEI----VGYPILPLVEQLSAH 90 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH---C-----CCCHHHHHHHHHH----HSSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhhh---c-----CCCHHHHHHHhhc----CCCcHHHHHHHHHHH
Confidence 57999999999999999999999 999999999999998 3 5679999999999 8899999999 588
Q ss_pred hCCCCC---CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 186 LGKNTV---LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 186 LG~~~g---N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+|. .| -.++||||.+||++++...-.+. .+ .+.|..|.++|..++++.+
T Consensus 91 ~g~-~g~~vH~g~SsnDv~~Ta~~L~lr~~l~-~l---------~~~l~~L~~~L~~~A~~~~ 142 (451)
T 3c8t_A 91 AGE-AGKYLHWGATTQDIMDTATVLQIRDGLA-LI---------SRRIESVRKALAALARNHR 142 (451)
T ss_dssp HGG-GGGGSSSSCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHTT
T ss_pred ccc-ccccccCCCChhhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHcc
Confidence 874 34 89999999999999998887775 55 5688999999999988864
No 17
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=99.52 E-value=7e-16 Score=146.89 Aligned_cols=116 Identities=14% Similarity=0.037 Sum_probs=101.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHHH--HH
Q psy16748 109 PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAI--EI 185 (291)
Q Consensus 109 P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~--Ei 185 (291)
++.+|+++..||+|+|++|.++| |+++.+++|.+||++ ++|+++.||+|+|| |.|||||+++. |+
T Consensus 21 ~~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~~~--------~~f~~~~~~~~~~~----~~~dV~a~~~~l~e~ 88 (450)
T 1re5_A 21 DRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQA--------ERYDTGALANAIAT----AGNSAIPLVKALGKV 88 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHCCG--------GGSCHHHHHHHHHH----HSSSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc--------CCCCHHHHHHHHhc----cCccHHHHHHHHHHH
Confidence 68999999999999999999999 999999999999976 35899999999998 58999999983 88
Q ss_pred hC------CCCCCCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhcc
Q psy16748 186 LG------KNTVLGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGEE 246 (291)
Q Consensus 186 LG------~~~gN~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~~ 246 (291)
+| +..-|.++||||.+||++++...-.+. .+ .+.|..|.++|..++++.+.
T Consensus 89 ~g~~~~~~~~~vh~g~SsnD~~~Ta~~l~lr~~l~-~l---------~~~l~~L~~~L~~~A~~~~~ 145 (450)
T 1re5_A 89 IATGVPEAERYVHLGATSQDAMDTGLVLQLRDALD-LI---------EADLGKLADTLSQQALKHAD 145 (450)
T ss_dssp HHHHCGGGGGGTTTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHTTT
T ss_pred hCCCCCcccccccCCCChhhhHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHccC
Confidence 88 233399999999999999999887775 55 56889999999999888653
No 18
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=99.50 E-value=3.8e-15 Score=142.71 Aligned_cols=136 Identities=10% Similarity=-0.103 Sum_probs=113.9
Q ss_pred ccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CC------HHhHHHHHHHHHHHHcCCCCCCC
Q psy16748 84 NDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LD------AKVADAISKAADEVISGKLYAEH 156 (291)
Q Consensus 84 ~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld------~ekA~AI~~AcdEIi~Gkl~~dq 156 (291)
-+-.|+..|.+..+.|. +..+|+++..|++|+|++|.++| |+ ++.+++|.++|++|..|
T Consensus 12 ~~gRy~~~~~~~~~~fs--------d~~~i~~~~~ve~A~a~ala~~g~i~~ip~i~~~~a~~I~~~~~~i~~g------ 77 (462)
T 2ptr_A 12 VDGRYGDKVSALRGIFS--------EYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEE------ 77 (462)
T ss_dssp TTTTTGGGSGGGGGTTS--------HHHHHHHHHHHHHHHHHHHHHCTTCTTSCCCCHHHHHHHHHHHHTCCHH------
T ss_pred ccccccCchHHHHHHCC--------cHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHhccC------
Confidence 34456667778888885 57999999999999999999996 73 79999999999877665
Q ss_pred cccccccCCchhhcCCChHHHHHHHHHHHhCC--------CCCCCcccCCCcccccchhhHHHHhhchhhhhcccccchh
Q psy16748 157 FPLVIWQTGSGTQTNMNTNEVISNRAIEILGK--------NTVLGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDE 228 (291)
Q Consensus 157 FPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~--------~~gN~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~ 228 (291)
+++.+|+|+ |++|||||+|+++++ |++|. +.-|.++||||.+||++++...-.+...+ .+
T Consensus 78 -~~~~~~~~~-~~~~~dv~av~~~l~-e~~g~~g~~~~~~~~vH~g~SsnDv~~Ta~~L~lr~~l~~~l---------~~ 145 (462)
T 2ptr_A 78 -DAARIKTIE-RTTNHDVKAVEYFLK-EKVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVI---------LP 145 (462)
T ss_dssp -HHHHHHHHH-HHHSCHHHHHHHHHH-HHHTTSHHHHTTGGGTTTTCCHHHHHHHHHHHHHHHHHHHTH---------HH
T ss_pred -CHHHHHhhc-cccCCCHHHHHHHHH-HHhccccCCcchhhhccCCCCHHHHHHHHHHHHHHHHHHHHH---------HH
Confidence 457899999 999999999999997 77873 22299999999999999999887774446 56
Q ss_pred hHhhhhhccCCCchhhc
Q psy16748 229 NVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 229 ~~~~l~~~~~~~~e~~~ 245 (291)
.|..|.++|..++++.+
T Consensus 146 ~L~~L~~~L~~~A~~~~ 162 (462)
T 2ptr_A 146 YWRQLIDGLKDLAVQYR 162 (462)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 88999999999888865
No 19
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=99.49 E-value=3.7e-15 Score=139.07 Aligned_cols=130 Identities=14% Similarity=0.033 Sum_probs=109.8
Q ss_pred CccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccC
Q psy16748 86 KYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQT 164 (291)
Q Consensus 86 aYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQg 164 (291)
.||+....+++ | | ++.+|+++..||+|+|++|.++| |+++.+++|.++|++| .|+++.||.
T Consensus 13 ~~~~~~~m~~~--f--s------~~~~i~~~~~ve~A~a~a~~~~G~i~~~~a~~I~~~~~~i--------~~~~~~~~~ 74 (359)
T 2fel_A 13 GLFGDSEIIEL--F--S------AKADIDAMIRFETALAQAEAEASIFADDEAEAIVSGLSEF--------AADMSALRH 74 (359)
T ss_dssp HHHCCHHHHGG--G--S------HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTC--------CCCHHHHHH
T ss_pred cccCCHHHHHH--c--C------cHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhc--------cccHHHHHh
Confidence 36776666554 4 3 67999999999999999999999 9999999999999876 378999999
Q ss_pred CchhhcCCChHHHHHHHHHHHhCCCCC---CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCc
Q psy16748 165 GSGTQTNMNTNEVISNRAIEILGKNTV---LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDS 241 (291)
Q Consensus 165 GSGTSTNMNVNEVIANRA~EiLG~~~g---N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~ 241 (291)
|+++..| |+|||+++++. ++|++.+ +.++||||.+||++.+...-.+. .+ .+.|..|.++|..++
T Consensus 75 ~~~~~~~-~~~~~~~~l~~-~~g~~~~~~vH~G~SsnDv~~Ta~~l~lr~~l~-~l---------~~~L~~l~~~L~~~A 142 (359)
T 2fel_A 75 GVAKDGV-VVPELIRQMRA-AVAGQAADKVHFGATSQDVIDTSLMLRLKMAAE-II---------ATRLGHLIDTLGDLA 142 (359)
T ss_dssp HHHHHSS-SHHHHHHHHHT-TSCGGGGGGTTTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHH
T ss_pred hccccCC-cHHHHHHHHHH-HcCccccchhcCCCCHhhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHH
Confidence 9999877 99999999865 6664433 99999999999999988777764 45 568899999999988
Q ss_pred hhhc
Q psy16748 242 EEGE 245 (291)
Q Consensus 242 e~~~ 245 (291)
++.+
T Consensus 143 ~~~~ 146 (359)
T 2fel_A 143 SRDG 146 (359)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8865
No 20
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=99.48 E-value=4e-15 Score=141.89 Aligned_cols=112 Identities=12% Similarity=-0.039 Sum_probs=99.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHH--HHH
Q psy16748 109 PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRA--IEI 185 (291)
Q Consensus 109 P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA--~Ei 185 (291)
++.+|++++.||+|+|++|.++| |+++.+++|.+|| +|+++.+|+|+|| |.|||||+++ .|+
T Consensus 25 d~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~-----------~~d~~~i~~~~~~----~~~dVia~~~~l~e~ 89 (444)
T 2pfm_A 25 EENKFKAWLEVEILACEAWAELGDIPKEDVKKIREHA-----------SFDIDRIYEIEKE----TRHDVVAFTRAVSET 89 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHC-----------CCCHHHHHHHHHH----HCCHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhC-----------CCCHHHHHHHhcc----CCCCHHHHHHHHHHH
Confidence 67999999999999999999999 9999999999997 5679999999998 7899999999 688
Q ss_pred hC-CCCC---CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 186 LG-KNTV---LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 186 LG-~~~g---N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+| ++.| ..++||||.+||++++...-.+. .+ .+.|..|.++|..++++.+
T Consensus 90 ~g~g~~g~~vH~g~SsnDv~~Ta~~L~lr~~l~-~l---------~~~l~~L~~~L~~~A~~~~ 143 (444)
T 2pfm_A 90 PALGEERKWVHYGLTSTDVVDTALSYILKQANE-II---------LKDLENFVSILANKAKEHK 143 (444)
T ss_dssp TTCCGGGGGTTTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHTT
T ss_pred cCCCcccccccCCCChhhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHhc
Confidence 86 5555 89999999999999998887775 55 5688999999999988865
No 21
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=99.45 E-value=9.1e-15 Score=138.49 Aligned_cols=111 Identities=9% Similarity=0.008 Sum_probs=99.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHH--HHH
Q psy16748 109 PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRA--IEI 185 (291)
Q Consensus 109 P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA--~Ei 185 (291)
++.+|+++..||+|+|.+|.++| |+++.+++|.+|| +|+++.+|+|+|| |.|||||+++ .|+
T Consensus 15 d~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~-----------~~d~~~i~~~~~~----~~~dVia~~~~l~e~ 79 (429)
T 1c3c_A 15 EEAKYRRWLEVELAVTRAYEELGMIPKGVTERIRNNA-----------KIDVELFKKIEEK----TNHDVVAFVEGIGSM 79 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHC-----------CCCHHHHHHHHHH----HCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhC-----------CCCHHHHHHHHhc----cCCChHHHHHHHHHH
Confidence 57999999999999999999999 9999999999997 4679999999998 7899999999 699
Q ss_pred hCCCCC---CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 186 LGKNTV---LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 186 LG~~~g---N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+|.. | -.++||||.+||++++...-.+. .+ .+.|..|.++|..++++.+
T Consensus 80 ~g~~-g~~vH~g~SsnD~~~Ta~~l~lr~~~~-~l---------~~~l~~l~~~L~~~A~~~~ 131 (429)
T 1c3c_A 80 IGED-SRFFHYGLTSSDVLDTANSLALVEAGK-IL---------LESLKEFCDVLWEVANRYK 131 (429)
T ss_dssp HGGG-GGGTTTTCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHTT
T ss_pred cCcc-cccccCCCChhhHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHhc
Confidence 9844 4 89999999999999999888775 55 5688999999999988865
No 22
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=96.41 E-value=0.001 Score=63.78 Aligned_cols=135 Identities=9% Similarity=-0.046 Sum_probs=88.1
Q ss_pred cCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHc-CC------CHHhHHHHHHHHHHHHcCCCCCCCc
Q psy16748 85 DKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEF-GL------DAKVADAISKAADEVISGKLYAEHF 157 (291)
Q Consensus 85 daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~el-GL------d~ekA~AI~~AcdEIi~Gkl~~dqF 157 (291)
+-.|+..|..-.+.|. ...++++...+..|-+.+..+. |+ +++.+++|.++++++..|.+
T Consensus 16 ~gRy~~~~~~~~~~fs--------d~~~~~~~l~ve~a~~~ala~~~gi~~ip~i~~~~~~~i~~~~~~~~~~d~----- 82 (459)
T 3bhg_A 16 DGRYVNKTRALSPYFS--------EFALTYYRLMVEIKWFESLAANDTIPEVPALDNKARKFLSDLISNFNESEA----- 82 (459)
T ss_dssp TTTTHHHHGGGTTTSS--------HHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCCHHHHHHHHHHHHTCCHHHH-----
T ss_pred cccccCChHHHHHHcC--------HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccccH-----
Confidence 3345455444444452 4689999999999999999999 46 27888999998865433221
Q ss_pred ccccccCCchhhcCCChHHHHHHHHHHHhCC--------CCCCCcccCCCcccccchhhHHHHhhchhhhhcccccchhh
Q psy16748 158 PLVIWQTGSGTQTNMNTNEVISNRAIEILGK--------NTVLGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDEN 229 (291)
Q Consensus 158 PLdvfQgGSGTSTNMNVNEVIANRA~EiLG~--------~~gN~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~ 229 (291)
. ...... ..++-.|--|.. .-.|.+|. +.-..++||||.+||++++...-.+.+.+ .+.
T Consensus 83 ~--~~~~~e-~~~~~Dv~a~e~-~l~e~~g~~~~~~~~~~~iH~g~SsnDv~~Ta~~L~lr~~l~~~l---------~~~ 149 (459)
T 3bhg_A 83 E--KIKEFE-KQTNHDVKAVEY-YLQDKFQENEQLKSCVAFIHFACTSEDINNLAYALMIKQAIAQVI---------QPT 149 (459)
T ss_dssp H--HHHHHT-TTCSSHHHHHHH-HHHHHHTTSTTGGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHTH---------HHH
T ss_pred H--HHHHHH-HhcCCChHHHHH-HHHHHhcccccCchhhhhhcCCCCHHhHHHHHHHHHHHHHHHHHH---------HHH
Confidence 0 000000 123333322222 22244552 22299999999999999998877776556 568
Q ss_pred HhhhhhccCCCchhhc
Q psy16748 230 VLNLSSAGSSDSEEGE 245 (291)
Q Consensus 230 ~~~l~~~~~~~~e~~~ 245 (291)
|..|.++|..++++.+
T Consensus 150 L~~l~~~L~~~A~~~~ 165 (459)
T 3bhg_A 150 IAEIMGSITLLGKQHA 165 (459)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcc
Confidence 8899999988888765
No 23
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=96.13 E-value=0.0017 Score=62.16 Aligned_cols=111 Identities=11% Similarity=-0.056 Sum_probs=77.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CCHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHH--HHH
Q psy16748 109 PLPVITAMGTLKKAAAQVNKEFG-LDAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRA--IEI 185 (291)
Q Consensus 109 P~elIrAla~VKkAAA~AN~elG-Ld~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA--~Ei 185 (291)
+...++++..|-.|.|.+..+ | ++++.+++|.++++ + + ++....... .+| +.|+|... .+.
T Consensus 16 ~~~~~~~~l~ve~Ala~a~~~-GlIp~~~~~~i~~~~~------~-d----~~~i~~~e~-~~~---hdV~a~~~~l~e~ 79 (438)
T 4eei_A 16 DENKYAKMLEVELAILEALED-RMVPKGTAAEIRARAQ------I-R----PERVDEIEK-VTK---HDIIAFCTSIAEQ 79 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG-TTSCTTHHHHHHHHCC------C-C----HHHHHHHHH-HHS---CHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHhhCC------C-C----HHHHHHHHH-hcC---CCHHHHHHHHHHH
Confidence 357899999999999999999 9 99999999988741 1 1 111100000 011 34665422 234
Q ss_pred hCCC-C--CCCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 186 LGKN-T--VLGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 186 LG~~-~--gN~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
+|.. . -..++||||.+||++++...-.+. .+ .+.|..|.++|..++++.+
T Consensus 80 ~g~~~~~~iH~G~SsnDv~~Ta~~L~lr~~~~-~l---------~~~L~~l~~~L~~~A~~~~ 132 (438)
T 4eei_A 80 FTAETGKFFHFGVTSSDIIDSALSLQIRDSMS-YV---------IKDLEALCDSLLTKAEETK 132 (438)
T ss_dssp SCTTTTTTTTCSCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHHT
T ss_pred cCHHhhcccCCCCCHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHhh
Confidence 5543 2 299999999999999998776653 45 6788999999999888865
No 24
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=94.35 E-value=0.01 Score=57.00 Aligned_cols=119 Identities=9% Similarity=-0.067 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHc-C-CCHHhHHHHHHHHHHHHcCCCCCC-CcccccccCCchhhcCCChHHHHHH--HHH
Q psy16748 109 PLPVITAMGTLKKAAAQVNKEF-G-LDAKVADAISKAADEVISGKLYAE-HFPLVIWQTGSGTQTNMNTNEVISN--RAI 183 (291)
Q Consensus 109 P~elIrAla~VKkAAA~AN~el-G-Ld~ekA~AI~~AcdEIi~Gkl~~d-qFPLdvfQgGSGTSTNMNVNEVIAN--RA~ 183 (291)
+..++++...+.+|.+.+..+. | ++++-+++|...+ ++++ ++ .. .|. .+.+--. .++ +.|+|- .-.
T Consensus 28 d~~~~~~~i~ve~A~~~ala~~~gii~~~~~~~i~~l~-~~~~-~~-~~~d~~-~i~~~e~--~~~---hDV~a~e~~l~ 98 (465)
T 2qga_B 28 EHALIKHRIIVEVRWLLFLNEEELFFEKVTDHSVEVLN-QIAT-NI-TDSDIA-RVKAIEE--ETN---HDVKAVEYFVK 98 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSCCCCHHHHHHHH-HHHH-CC-CHHHHH-HHHHHHH--HHS---CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH-HHHH-hh-ccccHH-HHHHHhh--ccC---CChHHHHHHHH
Confidence 4688999999999999999999 9 8988889988533 3332 12 10 111 0111111 122 223221 112
Q ss_pred HHhC----------CCCCCCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 184 EILG----------KNTVLGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 184 EiLG----------~~~gN~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
|.+| ++.-..++||||.+||++++...-.+.+.+ .+.|..|.++|..++++.+
T Consensus 99 e~~g~~~~~~~~~~~~~iH~g~SsnDv~~Ta~~L~lr~~l~~~l---------~~~L~~l~~~L~~~A~~~~ 161 (465)
T 2qga_B 99 EKLKNSKREDLLKIKEYVHYLCTSEDINNVAYATCLKACLNDVV---------IPCLEKIMLKLKDLAVEYS 161 (465)
T ss_dssp HHHHTSCCHHHHHHGGGTTTTCCHHHHHHHHHHHHHHHHHHHTH---------HHHHHHHHHHHHHHHHHTT
T ss_pred HHhcccccccchhhhhhccCCCChhhHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHcc
Confidence 3344 233399999999999999998877776566 5688899999988888765
No 25
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=91.27 E-value=0.097 Score=50.99 Aligned_cols=138 Identities=9% Similarity=-0.074 Sum_probs=91.2
Q ss_pred cCCccccCccCccchhhhhhhhccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcC--CCHHhHHHHHHHHHHHHcCCCC
Q psy16748 76 TFGELQVPNDKYYGAQTVRSTINFPIGGETERMPLPVITAMGTLKKAAAQVNKEFG--LDAKVADAISKAADEVISGKLY 153 (291)
Q Consensus 76 sLGev~VP~daYYGaQTqRAleNF~Isg~~e~mP~elIrAla~VKkAAA~AN~elG--Ld~ekA~AI~~AcdEIi~Gkl~ 153 (291)
.+....-|-+..|+....|++ | | +...|++...+.+|.|.++.++| ++++.+++|.++
T Consensus 31 ~~~~~~spl~~ry~~~~m~~~--f--S------~~~~~~~~~~~e~Ala~a~~~~Gl~i~~e~~~~I~~~---------- 90 (503)
T 2j91_A 31 SPDSYRSPLASRYASPEMCFV--F--S------DRYKFRTWRQLWLWLAEAEQTLGLPITDEQIREMKSN---------- 90 (503)
T ss_dssp CTTSCCCHHHHTTSCHHHHHH--T--S------HHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTT----------
T ss_pred CcccccCCcccccCCHHHHHH--h--C------hhHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH----------
Confidence 355566677766777766665 4 3 34689999999999999999999 677777777653
Q ss_pred CCCcccccccCCchhhcCCChHHHHHHHHHHHhCCCCC--CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHh
Q psy16748 154 AEHFPLVIWQTGSGTQTNMNTNEVISNRAIEILGKNTV--LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVL 231 (291)
Q Consensus 154 ~dqFPLdvfQgGSGTSTNMNVNEVIANRA~EiLG~~~g--N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~ 231 (291)
.++|..+...+.. ..+|-.|-.+|-. -.|.+|...+ ..+.||+|-..|++.+-..-.+ ..+ .+.|.
T Consensus 91 l~~i~~~~~~~~e-~~~~hDV~a~v~~-l~e~~g~~~~~iH~G~TS~Di~dta~~L~lr~al-~~l---------~~~L~ 158 (503)
T 2j91_A 91 LENIDFKMAAEEE-KRLRHDVMAHVHT-FGHCCPKAAGIIHLGATSCYVGDNTDLIILRNAL-DLL---------LPKLA 158 (503)
T ss_dssp SSCCCHHHHHHHH-HHHSCHHHHHHHH-HHHHCTTTGGGTTTTCCTHHHHHHHHHHHHHHHH-HHH---------HHHHH
T ss_pred HhhcCHHHHhhhh-hhcCCcHHHHHHH-HHHHhccccccccCCCCHhhHHHHHHHHHHHHHH-HHH---------HHHHH
Confidence 2355555554332 4555444444433 2455553322 7788888888877753333333 233 67899
Q ss_pred hhhhccCCCchhhc
Q psy16748 232 NLSSAGSSDSEEGE 245 (291)
Q Consensus 232 ~l~~~~~~~~e~~~ 245 (291)
.|.++|..++++.+
T Consensus 159 ~L~~~L~~~A~~~~ 172 (503)
T 2j91_A 159 RVISRLADFAKERA 172 (503)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988865
No 26
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=82.84 E-value=0.83 Score=43.94 Aligned_cols=112 Identities=13% Similarity=-0.028 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC---CHHhHHHHHHHHHHHHcCCCCCCCcccccccCCchhhcCCChHHHHHHHH--HH
Q psy16748 110 LPVITAMGTLKKAAAQVNKEFGL---DAKVADAISKAADEVISGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRA--IE 184 (291)
Q Consensus 110 ~elIrAla~VKkAAA~AN~elGL---d~ekA~AI~~AcdEIi~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA--~E 184 (291)
...+++...+.+|.|.++.++|+ +++.+++|.++++ +|..+...+.. ..++ ++|++..- .|
T Consensus 28 ~~~~~~~~~~e~Ala~a~~~~Gl~~i~~~~~~~I~~~l~----------~i~~~~~~~~e-~~~~---~DV~a~v~~l~e 93 (478)
T 1yis_A 28 TNKATLWRQLWIWLAEAEKELGLKQVTQDAIDEMKSNRD----------VFDWPFIRSEE-RKLK---HDVMAHNHAFGK 93 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHTTT----------CCCHHHHHHHH-HHSS---CHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHH----------hCCHHHHhhHH-HhcC---CcHHHHHHHHHH
Confidence 46799999999999999999995 7787888776432 34444443322 2334 55555432 34
Q ss_pred HhCCCCC--CCcccCCCcccccchhhHHHHhhchhhhhcccccchhhHhhhhhccCCCchhhc
Q psy16748 185 ILGKNTV--LGWFSQNGERLLFLPIADFWQLLNPYLDRRNKKNVDENVLNLSSAGSSDSEEGE 245 (291)
Q Consensus 185 iLG~~~g--N~~qSsNdtfpt~mhia~~~e~~~~~~~r~~~~~~~~~~~~l~~~~~~~~e~~~ 245 (291)
.+|...+ ..+.||+|-..|++.+-..-.+ ..+ .+.|..|.++|..++++.+
T Consensus 94 ~~g~~~~~iH~G~TS~Di~~ta~~L~lr~~l-~~l---------~~~L~~L~~~L~~~A~~~~ 146 (478)
T 1yis_A 94 LCPTAAGIIHLGATSCFVQDNADLIAYRDSI-DHI---------LKRFATVIDRLAAFSLKNK 146 (478)
T ss_dssp HCTTTGGGTTTTCCHHHHHHHHHHHHHHHHH-HHH---------HHHHHHHHHHHHHHHHHTT
T ss_pred hhhhchhheeCCCchhhhHHHHHHHHHHHHH-HHH---------HHHHHHHHHHHHHHHHHcC
Confidence 5553222 7788888888887754433333 234 6789999999999988865
No 27
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=49.05 E-value=4.4 Score=28.61 Aligned_cols=14 Identities=29% Similarity=0.883 Sum_probs=11.5
Q ss_pred cccccccceeeecC
Q psy16748 4 DCTSCGKKIEISNF 17 (291)
Q Consensus 4 ~~~~~~~~~~~~~~ 17 (291)
.|++|||.|-+|-.
T Consensus 19 vC~~CgkPi~lsAI 32 (44)
T 2lo3_A 19 VCEKCGKPLALTAI 32 (44)
T ss_dssp ECTTTCCEEETTTH
T ss_pred hhcccCCcchHHHH
Confidence 49999999987753
No 28
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=46.92 E-value=7.4 Score=24.36 Aligned_cols=13 Identities=46% Similarity=1.081 Sum_probs=11.2
Q ss_pred CCCccccccccee
Q psy16748 1 MNSDCTSCGKKIE 13 (291)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (291)
|++.|..|||.+-
T Consensus 2 m~~~C~~C~k~Vy 14 (31)
T 1zfo_A 2 MNPNCARCGKIVY 14 (31)
T ss_dssp CCCBCSSSCSBCC
T ss_pred CCCcCCccCCEEe
Confidence 7889999999873
No 29
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=37.71 E-value=25 Score=25.99 Aligned_cols=45 Identities=18% Similarity=0.148 Sum_probs=34.9
Q ss_pred CCHHhHHHHHHHHHHHH-cCCCCCCCcccccccCCchhhcCCChHHHHHHHHHHH
Q psy16748 132 LDAKVADAISKAADEVI-SGKLYAEHFPLVIWQTGSGTQTNMNTNEVISNRAIEI 185 (291)
Q Consensus 132 Ld~ekA~AI~~AcdEIi-~Gkl~~dqFPLdvfQgGSGTSTNMNVNEVIANRA~Ei 185 (291)
|.++.++||.+|.||-+ .|.| ++.=-|-++ --|+.|+--|-|..+
T Consensus 5 lt~eq~~aILkaLdeaIe~GPW-e~SNFLRvI--------GKnL~eIRd~F~~~i 50 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPW-DKSNFLRVI--------GKKLIAIRDRFLKRI 50 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCT-TSCHHHHHH--------HHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCc-hHHHHHHHH--------HHhHHHHHHHHHHHh
Confidence 78999999999999877 6998 665445554 357788877777765
No 30
>1jw2_A Hemolysin expression modulating protein HHA; structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Escherichia coli} SCOP: a.23.5.1 PDB: 2jvp_A 2k5s_A
Probab=31.36 E-value=36 Score=26.11 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=27.4
Q ss_pred CCHHhHHHHHHHHH----HHHcCCCCCCCccccccc
Q psy16748 132 LDAKVADAISKAAD----EVISGKLYAEHFPLVIWQ 163 (291)
Q Consensus 132 Ld~ekA~AI~~Acd----EIi~Gkl~~dqFPLdvfQ 163 (291)
|+++-..+.-.|+| ||..|++ -|.-|-.||+
T Consensus 35 Lt~~el~~f~~AaDHR~AEL~~~kl-yDkvP~sVW~ 69 (72)
T 1jw2_A 35 LSDNELAVFYSAADHRLAELTMNKL-YDKIPSSVWK 69 (72)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSSSC-CSCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCch-HhhCCHHHhH
Confidence 78888889999998 8888999 7799999996
No 31
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.55 E-value=28 Score=25.01 Aligned_cols=28 Identities=18% Similarity=0.460 Sum_probs=17.9
Q ss_pred CcccccccceeeecC--CCccccccccccC
Q psy16748 3 SDCTSCGKKIEISNF--PPTLHAHEGCLKL 30 (291)
Q Consensus 3 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 30 (291)
..|..|+|.|..... ......|..|++-
T Consensus 16 ~~C~~C~~~I~~~e~v~a~~~~wH~~CF~C 45 (82)
T 2co8_A 16 DLCALCGEHLYVLERLCVNGHFFHRSCFRC 45 (82)
T ss_dssp CBCSSSCCBCCTTTBCCBTTBCCBTTTCBC
T ss_pred CCCcccCCCcccceEEEECCCeeCCCcCEE
Confidence 469999999952211 2234678888764
No 32
>3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} SCOP: d.3.1.0 PDB: 2y5b_A 3mtn_A
Probab=23.53 E-value=28 Score=29.90 Aligned_cols=23 Identities=30% Similarity=0.687 Sum_probs=18.8
Q ss_pred Ccccccccc------eeeecCCCcccccc
Q psy16748 3 SDCTSCGKK------IEISNFPPTLHAHE 25 (291)
Q Consensus 3 ~~~~~~~~~------~~~~~~~~~~~~~~ 25 (291)
..|..|+++ +.|..+||.|-.|-
T Consensus 227 ~~C~~C~~~~~a~k~~~i~~lP~vL~i~l 255 (355)
T 3i3t_A 227 PVCDRCRQKTRSTKKLTVQRFPRILVLHL 255 (355)
T ss_dssp CCCSSSCCCCCEEEEEEEEECCSEEEEEE
T ss_pred eeCCCCCCccceEEEEEcccCChheEEEh
Confidence 469999966 67899999998773
No 33
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.11 E-value=25 Score=24.19 Aligned_cols=28 Identities=21% Similarity=0.503 Sum_probs=17.7
Q ss_pred Ccccccccceee--e-cC--CCccccccccccC
Q psy16748 3 SDCTSCGKKIEI--S-NF--PPTLHAHEGCLKL 30 (291)
Q Consensus 3 ~~~~~~~~~~~~--~-~~--~~~~~~~~~~~~~ 30 (291)
..|..|++.|.- . .+ ...-+.|..|++=
T Consensus 6 ~~C~~C~~~I~~~~~~~~~~a~~~~wH~~CF~C 38 (72)
T 1x4l_A 6 SGCAGCTNPISGLGGTKYISFEERQWHNDCFNC 38 (72)
T ss_dssp CSBTTTTBCCCCSSSCSCEECSSCEECTTTCBC
T ss_pred CCCcCCCccccCCCCcceEEECCcccCcccCEe
Confidence 469999999974 1 11 1234677777654
No 34
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=22.84 E-value=34 Score=23.03 Aligned_cols=28 Identities=18% Similarity=0.363 Sum_probs=17.5
Q ss_pred CCcccccccceeeecC---CCcccccccccc
Q psy16748 2 NSDCTSCGKKIEISNF---PPTLHAHEGCLK 29 (291)
Q Consensus 2 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 29 (291)
...|..|++.|.-... ......|..|++
T Consensus 11 ~~~C~~C~~~i~~~e~~~~~~~~~~H~~CF~ 41 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVNSNGELYHEQCFV 41 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEEETTEEEETTTSS
T ss_pred CccchhcCccccCCceEEEeCcCeeCcCCCc
Confidence 4579999999872210 223356777765
No 35
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.41 E-value=42 Score=22.87 Aligned_cols=29 Identities=24% Similarity=0.462 Sum_probs=18.2
Q ss_pred CCcccccccceeeecC---CCccccccccccC
Q psy16748 2 NSDCTSCGKKIEISNF---PPTLHAHEGCLKL 30 (291)
Q Consensus 2 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 30 (291)
...|..|++.|..... ......|..|++=
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C 36 (72)
T 1wyh_A 5 SSGCSACGETVMPGSRKLEYGGQTWHEHCFLC 36 (72)
T ss_dssp CCBCSSSCCBCCSSSCEECSTTCCEETTTCBC
T ss_pred CCCCccCCCccccCccEEEECccccCcccCeE
Confidence 3579999999974211 1234567777653
No 36
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.26 E-value=36 Score=23.33 Aligned_cols=28 Identities=25% Similarity=0.485 Sum_probs=17.9
Q ss_pred CcccccccceeeecC---CCccccccccccC
Q psy16748 3 SDCTSCGKKIEISNF---PPTLHAHEGCLKL 30 (291)
Q Consensus 3 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 30 (291)
..|..|++.|.-... ......|..|++=
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C 36 (72)
T 1x61_A 6 SGCGGCGEDVVGDGAGVVALDRVFHVGCFVC 36 (72)
T ss_dssp CCCSSSCSCCCSSSCCEECSSSEECTTTCBC
T ss_pred CCCccCCCccCCCceEEEECCCeEcccCCcc
Confidence 579999999864211 2234667777653
No 37
>1n0w_B Breast cancer type 2 susceptibility protein; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: j.97.1.1
Probab=20.29 E-value=22 Score=23.97 Aligned_cols=14 Identities=36% Similarity=0.513 Sum_probs=11.8
Q ss_pred Ccccccccceeeec
Q psy16748 3 SDCTSCGKKIEISN 16 (291)
Q Consensus 3 ~~~~~~~~~~~~~~ 16 (291)
.-||.-||||+|+.
T Consensus 7 gFhTASGKkv~Iak 20 (35)
T 1n0w_B 7 GFHTASGKKVKIAK 20 (35)
T ss_dssp SCEETTSCBCCCCH
T ss_pred eeeecCCcEEEehH
Confidence 56899999999973
Done!