BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16749
(821 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357621647|gb|EHJ73416.1| putative pol-like protein [Danaus plexippus]
Length = 1133
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 167/352 (47%), Gaps = 22/352 (6%)
Query: 478 CNKYLNIMKMICNKHWGMNPTIGLNYYKATIRATLDFGSVFYSESCSSKLKTLDKVQNQA 537
C +NI++ + WG +P Y A IR+ D+GS S L LDK+Q +
Sbjct: 664 CENNINILRSLSGVWWGSHPYTQKILYNAIIRSHFDYGSFLLVPCIKSALSILDKIQAKC 723
Query: 538 LRLAMGYLNSTPIDNILVECRENPMSKRTPQLVDRFVLKVIS-SQTALAAKLNTLTVTHM 596
LR+ G + S+PI+ + VEC E P+ R L DRF LKVI S L KLN+L+
Sbjct: 724 LRIICGAMKSSPINALQVECGEAPLHLRRQYLSDRFFLKVIQFSNHPLIPKLNSLSDLIP 783
Query: 597 TSKYCKTKPTPPIVNSYCNISHQYGRELITYEKPIIYNYD-------YDIGKVSLQSETF 649
++KY K P ++ S + + P++ N YD+ ++ +
Sbjct: 784 SNKYWSHKEYPCLLTSLV--------KFLRLPCPVLQNQMFPLFATPYDV--LNFHPQIL 833
Query: 650 NEYRKHPDS-LQDAALSSEIQEKCPNAICIYTDASKKNEK--VGAAWFCPTYKSKACFKL 706
E+ S + + + ++E + +CIYTDASK ++ GAA + P Y FK
Sbjct: 834 LEFGIDKGSAIANVQFQNYVKEHWSDWLCIYTDASKMADQSNAGAAVWIPKYNIILNFKF 893
Query: 707 HPATSTYTAEVIGIWEALKYSASLKNNEILILTDSKSACQKLSKNCLNTTPTH-LELEIL 765
S +TAE I I EA+ + S K N +I +DSKS Q +++N + + L+I
Sbjct: 894 PSEISIFTAESIAILEAVSFVESHKLNNSIIFSDSKSCLQAIARNPFISKHNYPYILKIK 953
Query: 766 SSYKHLQNTCKTVKLAWIKGHEGIKGNVEVDRLAKYATVHGEASTIVISPTN 817
Q++ V+LAWI H GI GN VD AK AT G + P +
Sbjct: 954 DILFRCQSSNIQVRLAWIPSHSGIHGNETVDYYAKDATNTGCMDHFGVYPND 1005
>gi|125901787|gb|ABN58714.1| pol-like protein [Biomphalaria glabrata]
Length = 1222
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 19/340 (5%)
Query: 478 CNKYLNIMKMICNKHWGMNPTIGLNYYKATIRATLDFGSVFYSESCSSKLKTLDKVQNQA 537
C K LNI++++ + WG + L Y++ IR+ LD+GS+ Y + S LK L+ +QN A
Sbjct: 759 CQKSLNILRVLSHTDWGADRDTLLLLYRSLIRSKLDYGSIIYGAARKSYLKILEPIQNAA 818
Query: 538 LRLAMGYLNSTPIDNILVECRENPMSKRTPQLVDRFVLKVISSQT--ALAAKLNTLTVTH 595
LRL +G ++PI ++ VE E PM R +L ++++K+ S+ T A + N V
Sbjct: 819 LRLCLGAFRTSPIPSLHVEAGELPMDIRMKKLAMQYIVKLKSNPTNPAFDSIFNPTEVEL 878
Query: 596 MTSKYCKTKPTP-----PIVNSYCNISHQYGRELITYEKPIIYNYDYDIGKVSLQSETFN 650
+ +P PI N I ++ E P + + K++L F
Sbjct: 879 YNRRPNVIQPLGLRMREPIQNLTQPID-----QISKIETPQNPPWLMNKPKLNLSLLNFK 933
Query: 651 EYRKHPDSLQDAALSSEIQEKCPNAICIYTDASKKNEKVGAAWFCPTYKSKACFKLHPAT 710
+ P LQ E+QE + IYTD SK KV A C +L
Sbjct: 934 KENTDPSILQ--VHFRELQESYGDCGTIYTDGSKMEGKVACA--CSFRNKTISRRLPDGC 989
Query: 711 STYTAEVIGIWEALKYSASLKNNEILILTDSKSACQKLSKNCLNTTPTHLELEILSSYKH 770
S +TAE+ I AL + + ++ +I +DSKSA Q L + + H L++L
Sbjct: 990 SIFTAELHAILLALMAVKASERSKFIICSDSKSALQALGRMKTDIPLVHKSLKLLDL--- 1046
Query: 771 LQNTCKTVKLAWIKGHEGIKGNVEVDRLAKYATVHGEAST 810
+ + V W+ H GI+GN DR AK A H + T
Sbjct: 1047 ITADRRDVTFIWVPSHVGIEGNEAADREAKRALNHAVSGT 1086
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 439 DEMNQPFTPEELEAAIKSGLITTPGRDNIHYPMIENLPDCNKYLNIMKMICNKHWGMNPT 498
++ N+PF+ EEL ++ T PG D IHY +++LP+ + + + IC G P
Sbjct: 421 EDYNKPFSLEELRESLDKSHDTAPGEDEIHYQFLKHLPEPSLAVLLGVYICVWQTGAFPN 480
Query: 499 IGLNYYKATI 508
++ KAT+
Sbjct: 481 ---SWRKATV 487
>gi|427791321|gb|JAA61112.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1210
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 27/335 (8%)
Query: 479 NKYLNIMKMICNKHWGMNPTIGLNYYKATIRATLDFGSVFYSESCSSKLKTLDKVQNQAL 538
NK LN++K++ +KHWG + L Y++ +R+ LD+G V Y + S ++ LD V N L
Sbjct: 739 NKALNLLKVLSHKHWGSDRLCLLRIYRSIVRSILDYGCVVYGSARESYIRRLDPVHNLGL 798
Query: 539 RLAMGYLNSTPIDNILVECRENPMSKRTPQLVDRFVLKVISSQTALAAKLNTL--TVTHM 596
RL+ G ++P++++ V+C E P+S R L +VL++ SS + + T + H
Sbjct: 799 RLSSGAYRTSPVESLYVDCNEPPLSHRRASLTLSYVLRIRSSPQHICYDIATRCSSRLHY 858
Query: 597 TSKYCKTKPTPPIVNSYCNISHQYGRELITYEKPIIYNYDYDIGKVSLQSETFNEYRKHP 656
+K KP YC L KP +D+ ++ S + + P
Sbjct: 859 LNKSNLIKPLLLRFEEYCRTYVISEETLDVARKPPRIPPWFDLAQLCDISLSHINKKVTP 918
Query: 657 DSLQDAALSSEIQEKCPNAICIYTDASKKNEKVGAAWFCPTYKSKACFKLHPATSTYTAE 716
L + +QEK + YTD SK + VG T +S ++ S +TAE
Sbjct: 919 PELIIQEFRA-LQEKYRDYAEFYTDGSKTRDHVGIG--IVTGESAFSVRVPQCISIFTAE 975
Query: 717 VIGIWEALKYSASLKNNEILILTDS---------KSACQKLSKNCLNTTPTHLELEILSS 767
V ++EA + + K+ + +I TDS KS C+ L + LN
Sbjct: 976 VYALYEAARKIIAGKHKKAIIYTDSLSALKALHIKSECEPLVGDILNMVL---------- 1025
Query: 768 YKHLQNTCKTVKLAWIKGHEGIKGNVEVDRLAKYA 802
+ + +++ W+ H GI GN + D+ A A
Sbjct: 1026 ---INSKVISMRFCWVPSHVGIPGNEKADKCASLA 1057
>gi|427791807|gb|JAA61355.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1212
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 27/335 (8%)
Query: 479 NKYLNIMKMICNKHWGMNPTIGLNYYKATIRATLDFGSVFYSESCSSKLKTLDKVQNQAL 538
NK LN++K++ +KHWG + L Y++ +R+ LD+G V Y + S ++ LD V N L
Sbjct: 742 NKALNLLKVLSHKHWGSDRLCLLRIYRSIVRSILDYGCVVYGSARESYIRRLDPVHNLGL 801
Query: 539 RLAMGYLNSTPIDNILVECRENPMSKRTPQLVDRFVLKVISSQTALAAKLNTL--TVTHM 596
RL+ G ++P++++ V+C E P+S R L +VL++ SS + + T + H
Sbjct: 802 RLSSGAYRTSPVESLYVDCNEPPLSHRRASLTLSYVLRIRSSPQHICYDIATRCSSRLHY 861
Query: 597 TSKYCKTKPTPPIVNSYCNISHQYGRELITYEKPIIYNYDYDIGKVSLQSETFNEYRKHP 656
+K KP YC L KP +D+ ++ S + + P
Sbjct: 862 LNKSNLIKPLLLRFEEYCRTYVISEETLDVARKPPRIPPWFDLAQLCDISLSHINKKVTP 921
Query: 657 DSLQDAALSSEIQEKCPNAICIYTDASKKNEKVGAAWFCPTYKSKACFKLHPATSTYTAE 716
L + +QEK + YTD SK + VG T +S ++ S +TAE
Sbjct: 922 PELIIQEFRA-LQEKYRDYAEFYTDGSKTRDHVGIG--IVTGESAFSVRVPQCISIFTAE 978
Query: 717 VIGIWEALKYSASLKNNEILILTDS---------KSACQKLSKNCLNTTPTHLELEILSS 767
V ++EA + + K+ + +I TDS KS C+ L + LN
Sbjct: 979 VYALYEAARKIIAGKHKKAIIYTDSLSALKALHIKSECEPLVGDILNMVL---------- 1028
Query: 768 YKHLQNTCKTVKLAWIKGHEGIKGNVEVDRLAKYA 802
+ + +++ W+ H GI GN + D+ A A
Sbjct: 1029 ---INSKVISMRFCWVPSHVGIPGNEKADKCASLA 1060
>gi|427798889|gb|JAA64896.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 35/346 (10%)
Query: 468 HYPMIENLPDCNKYLNIMKMICNKHWGMNPTIGLNYYKATIRATLDFGSVFYSESCSSKL 527
H I+N C K +NI+K++ WG + +N YK+ IR LD+G++ Y + + L
Sbjct: 757 HIKYIKN--KCLKTMNILKVLSRTTWGSDKKCLMNLYKSLIRTRLDYGAIIYQSASPTAL 814
Query: 528 KTLDKVQNQALRLAMGYLNSTPIDNILVECRENPMSKRTPQLVDRFVLKVISSQTA-LAA 586
K LD V + +RL+ G ++P++++ VE E + + + + +KV + + +
Sbjct: 815 KMLDPVHHLGIRLSTGAFRTSPVESLYVESNEWSLHLQRSYMSFLYYIKVNADKEHPSHS 874
Query: 587 KLNTLTVTHMTSKYCKTKPT--PPIVNSYCNISHQYGRELITYE--KPIIY--NYDYDIG 640
+N L+ S + +P+ PP +++ Q G L + P Y + + +
Sbjct: 875 TINDLS----CSTLFENRPSLKPPYSLRVRDLAEQTGLPLFEHRLMAPAAYPPPWQWQLI 930
Query: 641 KVSLQSETFNEYRKHPDSLQDAALSSEIQEK--CPNAICIYTDASKKNEKVGAAWFCPTY 698
+ +F E KH E+Q K CP YTDASK + V A P++
Sbjct: 931 DCDV---SFMEVTKHAPIAHIRTYFLELQHKYNCP---AFYTDASKSHTSVSYAAVGPSF 984
Query: 699 KSKACFKLHPATSTYTAEVIGIWEALKYSASLKNNEILILTDSKSACQKL-----SKNCL 753
+ LHP TS +TAE I A+K+ LK + +I TDS S + L +N +
Sbjct: 985 SAAG--ALHPNTSIFTAEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALKTLKKHRNPV 1042
Query: 754 NTTPTHLELEILSSYKHLQNTCKTVKLAWIKGHEGIKGNVEVDRLA 799
+ L I +S +H V + W+ GH I+GNV D+LA
Sbjct: 1043 LVSLYSLLCTIYTSKQH-------VVVCWVPGHREIQGNVMADQLA 1081
>gi|427798887|gb|JAA64895.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 35/346 (10%)
Query: 468 HYPMIENLPDCNKYLNIMKMICNKHWGMNPTIGLNYYKATIRATLDFGSVFYSESCSSKL 527
H I+N C K +NI+K++ WG + +N YK+ IR LD+G++ Y + + L
Sbjct: 757 HIKYIKN--KCLKTMNILKVLSRTTWGSDKKCLMNLYKSLIRTRLDYGAIIYQSASPTAL 814
Query: 528 KTLDKVQNQALRLAMGYLNSTPIDNILVECRENPMSKRTPQLVDRFVLKVISSQTA-LAA 586
K LD V + +RL+ G ++P++++ VE E + + + + LKV + + +
Sbjct: 815 KMLDPVHHLGIRLSTGAFRTSPVESLYVESNEWSLHLQRSYMSFLYYLKVNADKEHPSHS 874
Query: 587 KLNTLTVTHMTSKYCKTKPT--PPIVNSYCNISHQYGRELITYE--KPIIY--NYDYDIG 640
+N L+ +S + +P+ PP ++ + G L + P Y + + +
Sbjct: 875 TINDLS----SSTLFENRPSLRPPYSLRVRGLAEETGLPLFEHRLMAPAAYPPPWQWQLI 930
Query: 641 KVSLQSETFNEYRKHPDSLQDAALSSEIQEK--CPNAICIYTDASKKNEKVGAAWFCPTY 698
+ +F E KH E+Q K CP YTDASK + V A P++
Sbjct: 931 DCDV---SFMEVTKHAPIAHIRTYFLELQHKYNCP---AFYTDASKSHTSVSYAAVGPSF 984
Query: 699 KSKACFKLHPATSTYTAEVIGIWEALKYSASLKNNEILILTDSKSACQKL-----SKNCL 753
+ LHP TS +TAE I A+K+ LK + +I TDS S + L KN +
Sbjct: 985 SAAG--ALHPNTSIFTAEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALKTLKKHKNSI 1042
Query: 754 NTTPTHLELEILSSYKHLQNTCKTVKLAWIKGHEGIKGNVEVDRLA 799
+ L + ++ +H V + W+ GH I+GNV D LA
Sbjct: 1043 LVSLYSLVCTVYTAKQH-------VVVCWVPGHREIQGNVMADHLA 1081
>gi|427798885|gb|JAA64894.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 35/346 (10%)
Query: 468 HYPMIENLPDCNKYLNIMKMICNKHWGMNPTIGLNYYKATIRATLDFGSVFYSESCSSKL 527
H I+N C K +NI+K++ WG + +N YK+ IR LD+G++ Y + + L
Sbjct: 757 HIQYIKN--KCLKTMNILKVLSRTTWGSDKKCLMNLYKSLIRTCLDYGAIIYQSASPTAL 814
Query: 528 KTLDKVQNQALRLAMGYLNSTPIDNILVECRENPMSKRTPQLVDRFVLKVISSQTA-LAA 586
K LD + + +RL+ G ++P++++ VE E + + + + LKV + + +
Sbjct: 815 KMLDPIHHLGIRLSTGAFCTSPVESLYVESNEWSLQLQRSYMSFLYYLKVNADKEHPSHS 874
Query: 587 KLNTLTVTHMTSKYCKTKPT--PPIVNSYCNISHQYGRELITYE--KPIIY--NYDYDIG 640
+N L+ +S + +P+ PP ++ + G L + P Y + + +
Sbjct: 875 TINDLS----SSTLFENRPSLRPPYSLRVRGLAEETGLPLFEHRLMAPAAYPPPWQWQLI 930
Query: 641 KVSLQSETFNEYRKHPDSLQDAALSSEIQEK--CPNAICIYTDASKKNEKVGAAWFCPTY 698
+ +F E KH E+Q K CP YTDASK + V A P++
Sbjct: 931 DCDV---SFMEVTKHAPIAHIRTYFLELQHKYNCP---AFYTDASKSHTSVSYAAVGPSF 984
Query: 699 KSKACFKLHPATSTYTAEVIGIWEALKYSASLKNNEILILTDSKSACQKL-----SKNCL 753
LHP TS +TAE I A+K+ LK + +I TDS S + L KN +
Sbjct: 985 SDAGV--LHPNTSIFTAEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALKTLKKHKNSI 1042
Query: 754 NTTPTHLELEILSSYKHLQNTCKTVKLAWIKGHEGIKGNVEVDRLA 799
+ L + ++ +H V + W+ GH I+GNV D LA
Sbjct: 1043 LVSLYSLVCTLYTAKQH-------VVVCWVPGHREIQGNVMADHLA 1081
>gi|323450868|gb|EGB06747.1| hypothetical protein AURANDRAFT_65424 [Aureococcus anophagefferens]
Length = 2778
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 76/247 (30%), Positives = 106/247 (42%), Gaps = 19/247 (7%)
Query: 193 LAAKVAGAL--VVGAAAAGAAVAVKKATAAKKTDKPGPAAKPASKPLAKTTTTKTTTAAK 250
LAA AGA+ +GA A +A +AA T P +A P + + T + +
Sbjct: 14 LAAADAGAMRSSLGALACCWLLAAADESAAP-TALPSYSASP-TVAPSSPPTASPSFSHD 71
Query: 251 PAISPVKKTATTTAKPAPKPATKPAPKPTTAAPKSTTTAPKPAPVRKPVASTITKTATST 310
P +SP T++ P P+ P P+TAAP TT AP T + T +
Sbjct: 72 PTLSPSTAAPTSSFAPTTSPSYAPTYAPSTAAP--TTGAPTATH-----RPTASPTTAAP 124
Query: 311 VSAAPKPSAPKPAAPKKPVAAPAPKPR---PATAAPAPKPLTN---GVTKRPVSATTTAS 364
+AAP + A + P AAP P P P TA+P+ P T+ + RP + TTA
Sbjct: 125 TTAAPSAAPSTAAPTEDPTAAPTPTPSTAAPTTASPSFSPTTSPQPTASPRPTATPTTAL 184
Query: 365 RTSSSSVTSAS-AAKPAAPRVPLSQRTSAAKPATKPATAKPSTTSKPTTASKPATAT-RP 422
+SS + + S A AAP T A P P T PTTA+ A + RP
Sbjct: 185 PSSSPTTAAPSYAPTTAAPSATAGPTTFAPVPRPDPGLPGSEYTEPPTTAAPSAAPSYRP 244
Query: 423 ATTTSKP 429
+ P
Sbjct: 245 TQEPTSP 251
Score = 55.8 bits (133), Expect = 8e-05, Method: Composition-based stats.
Identities = 56/193 (29%), Positives = 76/193 (39%), Gaps = 15/193 (7%)
Query: 228 PAAKPASKPLAKTTTTKT-----TTAAKPAISPVKKTATTTAKPAPKPATK-PAPKPTTA 281
P A P P TT + TT+ +P SP TTA P+ P T P+ PTTA
Sbjct: 142 PTAAPTPTPSTAAPTTASPSFSPTTSPQPTASPRPTATPTTALPSSSPTTAAPSYAPTTA 201
Query: 282 APKSTTTAPKPAPVRKPVASTITKTATSTVSAAPKPSAPKPAAPKKPVAAPAPKPRPAT- 340
AP +T APV +P S + P +AP A +P P P A
Sbjct: 202 APSATAGPTTFAPVPRPDPG----LPGSEYTEPPTTAAPSAAPSYRPTQEPTSPPPFAVV 257
Query: 341 -AAPAPKPLTNGVTKRPVSATTTASRTSSSSVTSASAAKPAAPRVPLSQRTSAAKPATKP 399
A+ P +T G+ V+A T+ + V S A + R A +P T
Sbjct: 258 IASSFPVRITGGLAN--VTAALVTPPTAKTLVRVLSVVDDEAATLFADLR-GATQPRTPA 314
Query: 400 ATAKPSTTSKPTT 412
+A P S+ T
Sbjct: 315 PSAAPCADSESWT 327
>gi|427795117|gb|JAA63010.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 1654
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 111/242 (45%), Gaps = 46/242 (19%)
Query: 213 AVKKATAAKKTDKPGPAAKPASKPLAKTTTTKTTTAAKP---AISPVKK----------- 258
A K AAK + P P A KP K TKT +AK A SP+KK
Sbjct: 1272 AQKTKPAAKASPAPKPRASSTDKPATKPLPTKTEASAKATPAAKSPLKKQPIAAKPTTAT 1331
Query: 259 -------TATTTAKPAPKPATKPAPKPTTAAPKSTTTAPKPAPVRKPVASTITKTATSTV 311
TA+TTAK + +P PKP ++AP + +A KP P +S ++ +T
Sbjct: 1332 TTAKQSSTASTTAKASLTRKPEP-PKPKSSAPATDASAKKPVPA----SSRLSTGSTRPT 1386
Query: 312 SAAPKPSAPKPAAPKKPVAAPAPKPRPATAAPAPKPLTNGVTKRPVSATTTASRTSSSSV 371
++ P + PA+ KP A P++ AP P+ T SA T+AS+ +
Sbjct: 1387 ASKPPEKSTAPASKAKPTA-------PSSTAPRPRTSTG-------SALTSASKAEVGTA 1432
Query: 372 TSASAAKPAAPRVPLSQ----RTSAAKPATKPATAKPSTTSKPTTA--SKPATATRPATT 425
AKPA R P+S+ T A ++ P +T S+PTTA S+P T +R +T
Sbjct: 1433 EKKPTAKPATTRPPISRTTPKSTQPASSSSAPRVGSSTTASRPTTAPTSRPGTTSRAGST 1492
Query: 426 TS 427
++
Sbjct: 1493 ST 1494
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 236 PLAKTTTTKTTTAAKPAISPVKKTATTTAKPA----PKPATKPAPKPTTAAPKSTTTAPK 291
P K++ T +AK + + +T + +P P+ +T PA K AP ST AP+
Sbjct: 1355 PKPKSSAPATDASAKKPVPASSRLSTGSTRPTASKPPEKSTAPASKAKPTAPSST--APR 1412
Query: 292 PAPVRKPVASTITKTATSTVSAAPKPSAPKPAAPKKPVAAPAPKP-RPATAAPAPKPLTN 350
P R S +T + + V A K KPA + P++ PK +PA+++ AP+ ++
Sbjct: 1413 P---RTSTGSALTSASKAEVGTAEKKPTAKPATTRPPISRTTPKSTQPASSSSAPRVGSS 1469
Query: 351 GVTKRPVSATTTASRTSSSSVTSASAAKPAAPRVPLSQRTSAAK-PATKPATAKPSTTSK 409
RP +A T+ T+S + ++++A K + P + +TS+A+ PAT+ A K
Sbjct: 1470 TTASRPTTAPTSRPGTTSRAGSTSTATKKTSDASPTAAKTSSARVPATRDA-----KLGK 1524
Query: 410 PTTASKPATATRPATTTSKPATTTST 435
+T + A A R TT A TST
Sbjct: 1525 DSTNQQLAGARRTETTQRSAAGRTST 1550
>gi|392342464|ref|XP_003754596.1| PREDICTED: collagen alpha-3(VI) chain [Rattus norvegicus]
Length = 3307
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 265 KPAP-KPATKPAPKPTTAAPKST--------TTAPKPAPVRKPVASTITKTATSTVSAAP 315
KPAP +P + TA+ K T A KP PV+ V + AP
Sbjct: 2985 KPAPAQPVHVQSASAQTASAKPVPAKPAPPQTAAAKPVPVKPAVPAQPAPAQPVHAQPAP 3044
Query: 316 ------KPSAPKPAAPKKPVAAPAPKPRPATAAPAPKPL-TNGVTKRPVSATTTASRTSS 368
KP+A KPA+ KPVAA KP+ TN T RP SA ++
Sbjct: 3045 AQPVLTKPAAMKPASANKPVAA--------------KPVATNTATVRPASAVK----PAA 3086
Query: 369 SSVTSASAAKPAAPRVPLSQRTSAAKPATKPATAKPSTTSKPTTASKPATATRPATTTSK 428
+S +A+ PAA R P++ + A +P KPA KP+TT S+ + +++
Sbjct: 3087 ASKPAATRPLPAAVR-PVATKPEAPRPQAKPAATKPATTKPMARVSREVQVSEVTENSAR 3145
Score = 40.0 bits (92), Expect = 4.7, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 225 KPGPAAKP-ASKPLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKP-ATKP-APKPTT- 280
KP A KP A+KP+A T T +A + K AT A +P ATKP AP+P
Sbjct: 3056 KPASANKPVAAKPVATNTATVRPASAVKPAAASKPAATRPLPAAVRPVATKPEAPRPQAK 3115
Query: 281 -AAPKSTTTAPKPAPVRKPVASTITKTATSTVSAAPKPSA 319
AA K TT P R+ S +T+ + P+PS+
Sbjct: 3116 PAATKPATTKPMARVSREVQVSEVTENSARLHWERPEPSS 3155
>gi|392350860|ref|XP_003750780.1| PREDICTED: collagen alpha-3(VI) chain [Rattus norvegicus]
Length = 3289
Score = 52.8 bits (125), Expect = 7e-04, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 265 KPAP-KPATKPAPKPTTAAPKST--------TTAPKPAPVRKPVASTITKTATSTVSAAP 315
KPAP +P + TA+ K T A KP PV+ V + AP
Sbjct: 2967 KPAPAQPVHVQSASAQTASAKPVPAKPAPPQTAAAKPVPVKPAVPAQPAPAQPVHAQPAP 3026
Query: 316 ------KPSAPKPAAPKKPVAAPAPKPRPATAAPAPKPL-TNGVTKRPVSATTTASRTSS 368
KP+A KPA+ KPVAA KP+ TN T RP SA ++
Sbjct: 3027 AQPVLTKPAAMKPASANKPVAA--------------KPVATNTATVRPASAVK----PAA 3068
Query: 369 SSVTSASAAKPAAPRVPLSQRTSAAKPATKPATAKPSTTSKPTTASKPATATRPATTTSK 428
+S +A+ PAA R P++ + A +P KPA KP+TT S+ + +++
Sbjct: 3069 ASKPAATRPLPAAVR-PVATKPEAPRPQAKPAATKPATTKPMARVSREVQVSEVTENSAR 3127
Score = 41.6 bits (96), Expect = 1.8, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 77/212 (36%), Gaps = 51/212 (24%)
Query: 256 VKKTATTTAKPAPKPATKPAPKPTTAAPKSTTTAPKPAPVRKPVASTITKTATSTVSAAP 315
V + T+ KP T P P + +PAP + +A S S P
Sbjct: 2859 VNSSLTSKVVTTMKPVTTTKPTSIVNLPPAKPAPVRPAPAQPVLAKPDPAKPVSAKSVPP 2918
Query: 316 KP--SAPKPAAPKKPVAAPAPKPRPATAA--------------------PAPKPLTNGVT 353
+P + P PA P +A A A PAP
Sbjct: 2919 QPVHAQPDPAQPVHVQSASAQTASAKPAPAKPAPPQTAATAAAKPVPVKPAP-------- 2970
Query: 354 KRPVSATTTASRTSS-------SSVTSASAAKPAAPRVPLSQRTSA-----AKPA----- 396
+PV + +++T+S + +AAKP + + + + A+PA
Sbjct: 2971 AQPVHVQSASAQTASAKPVPAKPAPPQTAAAKPVPVKPAVPAQPAPAQPVHAQPAPAQPV 3030
Query: 397 -TKPATAKPSTTSKPTTASKPATAT---RPAT 424
TKPA KP++ +KP A AT T RPA+
Sbjct: 3031 LTKPAAMKPASANKPVAAKPVATNTATVRPAS 3062
Score = 40.0 bits (92), Expect = 5.1, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 225 KPGPAAKP-ASKPLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKP-ATKP-APKPTT- 280
KP A KP A+KP+A T T +A + K AT A +P ATKP AP+P
Sbjct: 3038 KPASANKPVAAKPVATNTATVRPASAVKPAAASKPAATRPLPAAVRPVATKPEAPRPQAK 3097
Query: 281 -AAPKSTTTAPKPAPVRKPVASTITKTATSTVSAAPKPSA 319
AA K TT P R+ S +T+ + P+PS+
Sbjct: 3098 PAATKPATTKPMARVSREVQVSEVTENSARLHWERPEPSS 3137
>gi|427795835|gb|JAA63369.1| Putative protein dao-5 isoform a, partial [Rhipicephalus pulchellus]
Length = 1252
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 54/246 (21%)
Query: 213 AVKKATAAKKTDKPGPAAKPASKPLAKTTTTKTTTAAKP---AISPVKK----------- 258
A K AAK + P P A KP K TKT +AK A SP+KK
Sbjct: 870 AQKTKPAAKASPAPKPRASSTDKPATKPLPTKTEASAKATPAAKSPLKKQPIAAKPTTAT 929
Query: 259 -------TATTTAKPA----PKPATKPAPKPTTAAPKSTTTAPKPAPVRKPVASTITKTA 307
TA+TTAK + P+P PKP ++AP + +A KP P +S ++ +
Sbjct: 930 TTAKQSSTASTTAKASLTRKPEP-----PKPKSSAPATDASAKKPVPA----SSRLSTGS 980
Query: 308 TSTVSAAPKPSAPKPAAPKKPVAAPAPKPRPATAAPAPKPLTNGVTKRPVSATTTASRTS 367
T ++ P + PA+ KP A P++ AP P+ T SA T+AS+
Sbjct: 981 TRPTASKPPEKSTAPASKAKPTA-------PSSTAPRPRTSTG-------SALTSASKAE 1026
Query: 368 SSSVTSASAAKPAAPRVPLSQRT-SAAKPATK---PATAKPSTTSKPTTA--SKPATATR 421
+ AKPA R P+S+ T + +PA+ P +T S+PTTA S+P T +R
Sbjct: 1027 VGTAEKKPTAKPATTRPPISRTTPKSTQPASSSSAPRVGSSTTASRPTTAPTSRPGTTSR 1086
Query: 422 PATTTS 427
+T++
Sbjct: 1087 AGSTST 1092
>gi|357023784|ref|ZP_09085953.1| putative Type I secretion system ATPase, PrtD [Mesorhizobium
amorphae CCNWGS0123]
gi|355544326|gb|EHH13433.1| putative Type I secretion system ATPase, PrtD [Mesorhizobium
amorphae CCNWGS0123]
Length = 964
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 103/238 (43%), Gaps = 37/238 (15%)
Query: 252 AISPVKKTATTT-----AKP--APKPATKPAPKPTTAAPKSTTTA------PKPA---PV 295
AIS + TA ++ A+P AP PAT P PKP A+ K+T + P+PA P
Sbjct: 174 AISAGQTTARSSVPSAQARPDGAPAPATVPTPKPAPASDKATAESSGQPARPEPARPEPA 233
Query: 296 RKPVASTITKTATSTVSAAPKPSAPKPAAPKKPVAAPAPKPRPAT--------AAPAPKP 347
R+P ST +A+P+P P + P AP P+PRPA+ AAPA +P
Sbjct: 234 RQPSQSTTAGAREVNAAASPEP----PRESRFPWPAPKPEPRPASTAQNQGASAAPAARP 289
Query: 348 LTNGVTKRPVS----ATTTASRTSSSSVTSASAAKPAAPRVPLSQRTSAAKPATK-PATA 402
V +RP A A RT + T S P +P P+S +TS K K P
Sbjct: 290 --EPVLQRPAEPLAKAAPGAPRTPGAPGTPGSPGAPGSPGTPVSPKTSEMKDVPKTPGMI 347
Query: 403 KPSTTSKPTTASKP--ATATRPATTTSKPATTTSTDIEDEMNQPFTPEELEAAIKSGL 458
+ P A +P + P S D ++ P + A++K+GL
Sbjct: 348 VIEGDTGPIKAKEPHQGGGSPPRDDDSGRRGGGGGDGGGVFHKRLGPVDFGASLKAGL 405
>gi|350547122|ref|ZP_08916461.1| 50S ribosomal protein L1 [Mycoplasma iowae 695]
gi|349503345|gb|EGZ30949.1| 50S ribosomal protein L1 [Mycoplasma iowae 695]
Length = 459
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 103/218 (47%), Gaps = 56/218 (25%)
Query: 225 KPGPAAKPASKPLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKPATKPAPKPTTAAPK 284
KP + KPA+KP+AKT + TAAKP V K T KP KP TK A KP T
Sbjct: 281 KPVVSKKPATKPVAKTDSK---TAAKPVAKVVSKP---TVKPTTKPVTKTASKPVTKP-- 332
Query: 285 STTTAPKPAPVRKPVASTITKTATSTVSAAPKPSAPKPAAPKKPVAAPAPKPRPATAAPA 344
TA KPA KPVA T+ K T KPA KPVA A KP AA
Sbjct: 333 VAKTASKPA--AKPVAKTVNKATT------------KPAT--KPVAKTASKP----AA-- 370
Query: 345 PKPLTNGVTKRPVSATTTASRTSSSSVTSASAAKPAAPRVPLSQRTSAAKPATKPATAKP 404
+PV+ TTT T + TS AKP A V S AAKP K AT KP
Sbjct: 371 ----------KPVAKTTTKPVTKA---TSKPVAKPVAKPVVKSASKPAAKPVAK-ATTKP 416
Query: 405 STTSKPT--TASKPAT--ATRPATTT------SKPATT 432
+KPT TASKPA +PAT T KPAT+
Sbjct: 417 --VAKPTNKTASKPAAKPVAKPATKTVSKTPAKKPATS 452
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 89/188 (47%), Gaps = 50/188 (26%)
Query: 228 PAAKPASKPLAKTTTTKTT-TAAKPAISPVKKTATTTAKPAPKPA--------TKPAPKP 278
P AK SKP K TT T TA+KP PV KTA+ KPA KP TKPA KP
Sbjct: 304 PVAKVVSKPTVKPTTKPVTKTASKPVTKPVAKTAS---KPAAKPVAKTVNKATTKPATKP 360
Query: 279 TTAAPKSTTTAPKPAPVRKPVASTITKTATSTVSAAPKPSAPKPAAPKKPVAAPAPKPRP 338
TA KPA KPVA T TK T S KPVA P KP
Sbjct: 361 VAK------TASKPA--AKPVAKTTTKPVTKATS--------------KPVAKPVAKPVV 398
Query: 339 ATAA-PAPKPLTNGVTKRPVSATT--TASRTSSSSVTSASAAKPAAPRVPLSQRTSAAKP 395
+A+ PA KP+ TK PV+ T TAS+ ++ V AKPA +T + P
Sbjct: 399 KSASKPAAKPVAKATTK-PVAKPTNKTASKPAAKPV-----AKPAT-------KTVSKTP 445
Query: 396 ATKPATAK 403
A KPAT+K
Sbjct: 446 AKKPATSK 453
>gi|443712251|gb|ELU05672.1| hypothetical protein CAPTEDRAFT_229022 [Capitella teleta]
Length = 1635
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 233 ASKPLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKPATKPAPKPTTA----APKSTTT 288
A+ P+ T+T+ A PV T T T+ +P + P TTA P ST T
Sbjct: 513 ATSPVGPTSTSDPVGPTTQATGPVGPTTTATSPASPTSTSGPVGPTTTATGPVGPTSTVT 572
Query: 289 AP-KPAPVRKPVASTITKTA----TSTVSAAPKP-SAPKPAAPKKPVAAPAPKPRPATAA 342
P P P+ T T TSTV+ P S P P P +P AT+
Sbjct: 573 DPVGPTSTSGPMGPTTPATGSVGPTSTVTGPVGPTSTSGPVGPTTPATSPVGPTITATSP 632
Query: 343 PAPKPLTNGVTKRPVSATTTASRTSSSSVTSASAAKPAAPRVPLSQRTSAAKP------A 396
P T PV TT A+ + T+ P + P+ T P A
Sbjct: 633 AGPTS-----TSGPVGPTTPATSSVGPISTATDPVGPTSTSGPVGTTTPGTGPVGPNITA 687
Query: 397 TKPATAKPSTTSKPTTASKPATA-TRPATTTSKPATTTST 435
T P A P++TS P +KPAT P TT + P TST
Sbjct: 688 TSP--AGPTSTSGPVGPTKPATGPVGPTTTATGPVGPTST 725
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 94/238 (39%), Gaps = 36/238 (15%)
Query: 226 PGPAAKPASK-----PLAKTTTTKTTTA-----AKPAISPVKKTATTTAKPAPKPATKPA 275
PG + P++ PL TT+ T+ P+ PV T T T+ P + P
Sbjct: 467 PGASTNPSAGTTPTLPLGPTTSPTAVTSDVAGPTAPSTGPVGPTTTATSPVGPTSTSDPV 526
Query: 276 PKPTTAA-----PKSTTTAP-KPAPVRKPVASTITKTATSTVSAAPKPSAPKPAAPKKPV 329
PTT A P +T T+P P PV T T T P + P P
Sbjct: 527 -GPTTQATGPVGPTTTATSPASPTSTSGPVGPTTTATG----PVGPTSTVTDPVGPTS-T 580
Query: 330 AAPAPKPRPATAAPAPKPLTNG-----VTKRPVSATTTASRTSSSSVTSASAAKP---AA 381
+ P PAT + P G T PV TT A+ ++T+ S A P +
Sbjct: 581 SGPMGPTTPATGSVGPTSTVTGPVGPTSTSGPVGPTTPATSPVGPTITATSPAGPTSTSG 640
Query: 382 PRVPLSQRTSAAKP---ATKPATAKPSTTSKPTTASKPATA-TRPATTTSKPATTTST 435
P P + TS+ P AT P P++TS P + P T P T + PA TST
Sbjct: 641 PVGPTTPATSSVGPISTATDP--VGPTSTSGPVGTTTPGTGPVGPNITATSPAGPTST 696
>gi|323450255|gb|EGB06137.1| hypothetical protein AURANDRAFT_65843 [Aureococcus anophagefferens]
Length = 3712
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 95/234 (40%), Gaps = 23/234 (9%)
Query: 220 AKKTDKPGPAAKPASKPLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKPATKPAPKPT 279
A D P P A P + P A T TAA + TA T PAP AT AP PT
Sbjct: 3083 AGFVDAPAPTASPVAAPTAATVDAPAPTAAT--VDAPAPTAATVDAPAPTAATVDAPAPT 3140
Query: 280 TA---APKST-TTAPKPAPVR------KPVASTITKTA-TSTVSAAPKPSAPKPAAPKKP 328
A AP T T PAP P A+T+ A T+ AP P+A AP P
Sbjct: 3141 AATVDAPAPTAATVDAPAPTAATVDAPSPTAATVDAPAPTAATVDAPAPTAATVDAP-AP 3199
Query: 329 VAAPAPKPRPATA---APAPKPLTNGVTKRPVSATTTASRTSSSSVTSASAAKPAAPRVP 385
AA P P A APAP T P +AT A ++++V A A A P
Sbjct: 3200 TAATVDAPAPTAATVDAPAPTAATID-APAPTAATVDAPAPTAATV-DAPAPTTATVDAP 3257
Query: 386 LSQRTSAAKPATKPATAK-PSTTSKPTTASKPATATRP---ATTTSKPATTTST 435
+ PA AT P+ T+ P A AT P A T PA T +T
Sbjct: 3258 APTAATVDAPAPTAATVDAPAPTASPVAAPTAATVDAPAPTAATVDAPAPTAAT 3311
>gi|22671619|gb|AAN04446.1|AF451898_153 Orf154 [Heliothis zea virus 1]
Length = 1505
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Query: 218 TAAKKTDKPGPAAKPASKPLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKPATKPAPK 277
TA+K KP P S P K +T T KP +T+ P PKPA+ P PK
Sbjct: 530 TASKHVSKPTPKPASTSNPTPKPVSTSNPTP-KPG---------STSNPTPKPASTPTPK 579
Query: 278 PTTAAPKSTTTAPKPAPVRKPVASTIT-KTATSTVSAAPKPSAPKPAA-PKKPVAAPAPK 335
P + P S + P P+ KP +S T K A+ S + +P++ KP + P + P PK
Sbjct: 580 PA-SKPDSVSKQPTPS---KPTSSKPTSKPASKPESVSKQPTSSKPTSKPTSTLTKPTPK 635
Query: 336 PRPATAAPAPKPLT-NGVTKRPVSATTTASRTSSSSVTSASAAKPAAPRVPLSQRTSAAK 394
P P KP + V+K+P S S + KP+ + + T+
Sbjct: 636 PTSTLTKPTSKPTKPDSVSKQPTS--------------SKPSEKPSD-KTTNTTTTTNTT 680
Query: 395 PATKPATAKPSTTSKPTTASKPA 417
P +KP +KP+ T+ T++SKPA
Sbjct: 681 PVSKPTLSKPTPTT--TSSSKPA 701
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 51/199 (25%)
Query: 236 PLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKPATKPAPKPTTAAPKSTTTAPKPAPV 295
P+AK T T AKPA A + +K A K +KP PKP ++T+ P P PV
Sbjct: 511 PVAKVTPT-----AKPA------EANSASKTASKHVSKPTPKP------ASTSNPTPKPV 553
Query: 296 RKPVASTITKTATSTVSAAPKPSAPKPAAPKKPVAAPAPKPRPATAAPAPKPLTNGVTKR 355
ST T PKP + P PA P P PA KP + V+K+
Sbjct: 554 -----STSNPT-------------PKPGSTSNPTPKPASTPTP---KPASKP--DSVSKQ 590
Query: 356 PVSATTTASRTSSSSVTSASAAKPAAPRVPLSQRTSAAKPATKPATAKPSTTSKPT-TAS 414
P T S+ +SS TS A+KP + +S++ +++KP +KP + T KPT T +
Sbjct: 591 P-----TPSKPTSSKPTSKPASKPES----VSKQPTSSKPTSKPTSTLTKPTPKPTSTLT 641
Query: 415 KPATA-TRPATTTSKPATT 432
KP + T+P + + +P ++
Sbjct: 642 KPTSKPTKPDSVSKQPTSS 660
>gi|30984464|ref|NP_851896.1| large tegument protein [Macacine herpesvirus 1]
gi|30844278|gb|AAP41454.1| very large tegument protein [Macacine herpesvirus 1]
Length = 3288
Score = 45.4 bits (106), Expect = 0.11, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 80/216 (37%), Gaps = 16/216 (7%)
Query: 236 PLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKPATKPAPKPTTAAPKSTTTAPKPAPV 295
P + T+T +A+ A +P + + + P P+P T A + T P P
Sbjct: 372 PKRASLPTRTRRSARHAATPFSRGSGGDEQTRP----AAGPRPPTPASRPPTPGAPPTPG 427
Query: 296 RKPVASTITKTATSTVSAAPKPSAPKPAAPKKPVAAPAPKPRPA--TAAPAPKPLTNGVT 353
P A P ++ +P P P A + P PA T A + P G
Sbjct: 428 APPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRP 487
Query: 354 KRPVSATTTASRTSSSSVTSASAAKPAAP--RVPLSQRTSAAKPATKPATAKPSTTSKPT 411
P T + ++SS A +P P R P +A +++P T P P+
Sbjct: 488 PTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTA---SSEPPTPNPEGAPAPS 544
Query: 412 TASKPATATRPATTTSKPATTTSTDIEDEMNQPFTP 447
+ +P PA ++ AT + D + P P
Sbjct: 545 SNEQP-----PAAASTDEATQKALDALRDRQPPEPP 575
>gi|154423053|ref|XP_001584538.1| megakaryocyte stimulating factor [Trichomonas vaginalis G3]
gi|121918785|gb|EAY23552.1| megakaryocyte stimulating factor, putative [Trichomonas vaginalis
G3]
Length = 563
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 61/122 (50%), Gaps = 23/122 (18%)
Query: 228 PAAKPASKPLAKTTTTKTTTAAKPAISPVKKTATTTAKPAPKPATKPAPKPT-TAAPKST 286
P KP + P+ K T T KP +P+ K TA P PKP P PKPT T PK T
Sbjct: 332 PIPKPTATPIPKPTATP---MPKPTGTPIPKP---TATPIPKPTGTPIPKPTATPIPKPT 385
Query: 287 TTAPKPAPVRKPVASTITKTATSTVSAAPKPSA-PKPAAPKKPVAAPAPKPRPATAAPAP 345
T P+ KP A+ I K T + PKP+A P P KP A P PKP TA P P
Sbjct: 386 AT-----PIPKPTATPIPK---PTGTPIPKPTATPIP----KPTATPIPKP---TATPMP 430
Query: 346 KP 347
KP
Sbjct: 431 KP 432
>gi|260949609|ref|XP_002619101.1| hypothetical protein CLUG_00260 [Clavispora lusitaniae ATCC 42720]
gi|238846673|gb|EEQ36137.1| hypothetical protein CLUG_00260 [Clavispora lusitaniae ATCC 42720]
Length = 1274
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 71/140 (50%), Gaps = 40/140 (28%)
Query: 235 KPLAKTTTTKTTTAAKPAISPVKKTA---------------TTTAKP--APKPATKPAPK 277
KP + T+T K TA KP I+P TA T KP APKP T APK
Sbjct: 668 KPNSSTSTPKPVTAPKPVIAPKPVTAPKPVTAPKPVTAPKPVTAPKPVTAPKPVT--APK 725
Query: 278 PTTAAPKSTTTAPKPAPVRKPVASTITKTATSTVSAAPKP-SAPKPA-APK-----KPVA 330
P T APK TAPKP KPV T K AT APKP +APKPA APK KP
Sbjct: 726 PVT-APK-PVTAPKPVTAPKPV--TAPKPAT-----APKPETAPKPAVAPKSVIMPKPAV 776
Query: 331 APAPK--PRPATAAPAPKPL 348
AP P P+PA APKP+
Sbjct: 777 APKPDVAPKPAV---APKPV 793
>gi|345864267|ref|ZP_08816470.1| ribonuclease E [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345124627|gb|EGW54504.1| ribonuclease E [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 985
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 115/249 (46%), Gaps = 49/249 (19%)
Query: 210 AAVAVKKATAAKKTDKPGPAAKPASKPLAK---TTTTKTTTAAKP----AISPVKKTATT 262
+A A+ K T A DK + +P K + +T+ TTA P A P +K+A
Sbjct: 716 SAAAISKETTASSGDKGQGRQRSQRRPAPKKKVSDSTEQTTAPTPSQEKAPGPAQKSAE- 774
Query: 263 TAKPAPKPATKPAPKPTTAAPKSTTTAPKPA--PVRKPV---ASTITKTATSTVSAAP-K 316
KPA KPA KPA KP A KPA P KP K T+ AP K
Sbjct: 775 --KPAEKPAEKPAEKP----------AEKPAEKPAEKPAKKRGDEKQKDVTTKPEKAPDK 822
Query: 317 PSAPKPAAPKKPVAAP-------APKPRPA--TAAPAPKPLTN-----GVTKRPVSATTT 362
P P P+KP AP A KP PA ++A AP+ T V K+P A +T
Sbjct: 823 PQKPAAKKPQKPTEAPQADKPAVAEKPSPANTSSAEAPQKSTADRPKPSVQKKPQKAPST 882
Query: 363 AS----RTSSSSVTSASAAKPAAPR---VPLSQRTSAAKPATKPATAKPSTTSKPTTASK 415
A+ TS + T+ S KPAA + +P ++ +A++ +TKPA ++ + T P A+
Sbjct: 883 AADNAPGTSEKAATNRS-TKPAASQKADMPTIEKAAASR-STKPAASQKADTPTPEKAAT 940
Query: 416 PATATRPAT 424
TA P T
Sbjct: 941 RQTAAAPKT 949
>gi|149911609|ref|ZP_01900221.1| ribonuclease E [Moritella sp. PE36]
gi|149805330|gb|EDM65343.1| ribonuclease E [Moritella sp. PE36]
Length = 1125
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 93/211 (44%), Gaps = 34/211 (16%)
Query: 244 KTTTAAKPAISPVKKTATT-TAKPAP----KPATKPAPKPTTAAPKSTTTA----PKPAP 294
+T AKP I+ V K T KP KP T KP TAA TA P A
Sbjct: 754 QTEQVAKPVIAEVTKPVTAEVTKPVTAEVTKPVTAAVTKPVTAAVTKPVTAEVTKPVTAA 813
Query: 295 VRKPVASTITKTATSTVSAAPKPSAPKP--AAPKKPVAAPAPKP------RPATAAPAPK 346
V KPV + +TK T+ V+ + KP A KPV A KP +P TAA K
Sbjct: 814 VAKPVTAAVTKPVTAAVTKPVTAAVTKPVTAEVTKPVTAAVTKPVTAEVTKPVTAA-VTK 872
Query: 347 PLTNGVTK-------RPVSATTTASRTS----SSSVTSASAAKPAAPRVPLSQRTSAAK- 394
P+T VTK +PV T A++ + ++SV AK +A RV + ++ +
Sbjct: 873 PVTAAVTKPVTAKAAKPVMHTAAAAKPAPVAETTSVIVTPTAKSSAERVKIETKSVTRQM 932
Query: 395 ---PATKPATAKPSTTSKPTTASKPATATRP 422
PAT+P A P T P A P A P
Sbjct: 933 HTAPATRPGAA-PVVTETPVVAETPVVAETP 962
>gi|393242439|gb|EJD49957.1| hypothetical protein AURDEDRAFT_84583 [Auricularia delicata
TFB-10046 SS5]
Length = 1127
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 81/174 (46%), Gaps = 33/174 (18%)
Query: 258 KTATTTAKPAPKPATKPAPKPT--TAAPKSTTTAPKPAPVRKP-VASTIT-KTATSTVSA 313
+ + T + A KP + AP PT T AP+ T + A R P VAS + KT + A
Sbjct: 810 RVSVTPSVAAKKPVARGAPTPTPATLAPRQRTISAASAASRTPSVASKVVPKTPKRELVA 869
Query: 314 APKPSAPKPAAPKKPVA--APAPKPRPATAAPAPKPLTNGVTKRPVSAT----------- 360
P+ APKP P P APAPK RP ++A +P ++ RP SA
Sbjct: 870 LPR-EAPKPPVPATPKTEPAPAPKSRPVSSAAKSRPASSAAKSRPTSAVKKPDEDIIMVD 928
Query: 361 -TTASRT---------SSSSVTSASAA--KPA---APRVPLSQRTSAAKPATKP 399
T ASRT SS ++T A+A +PA AP P Q T + PA +P
Sbjct: 929 DTPASRTSVSTIRRKGSSDTITEANALTIRPANRPAPSPPQVQHTFSQPPAPQP 982
>gi|152964542|ref|YP_001360326.1| metal dependent phosphohydrolase [Kineococcus radiotolerans
SRS30216]
gi|151359059|gb|ABS02062.1| metal dependent phosphohydrolase [Kineococcus radiotolerans
SRS30216]
Length = 736
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 82/162 (50%), Gaps = 27/162 (16%)
Query: 215 KKATAAKKTDKPGPAAKPASKPLAKTT--TTKTTTAAKPAIS-PVKKTATTTAKPAP--- 268
+ T + PG A +PA+ P ++TT T +A KP+ P K +T +KP P
Sbjct: 486 RGTTGPRPAATPGAATRPAA-PASRTTAPTAGGASAVKPSTGAPKPKPSTGASKPKPSTG 544
Query: 269 ----KPATKPA-PKPTTAA--PKSTTTAPKPAP---VRKPVASTIT-KTATSTVSAAPKP 317
KP+T + PKP+T A PK +T A KP P KP ST T K ST + PKP
Sbjct: 545 ASKPKPSTGASKPKPSTGASKPKPSTGASKPKPSTGASKPKPSTGTPKPKPSTGTPKPKP 604
Query: 318 SAP--------KPAAPKKPVAAPA-PKPRPATAAPAPKPLTN 350
S P +PA PK + PA PKP P+T AP P+P T
Sbjct: 605 SEPAGPKPKPSEPAGPKPEPSEPAGPKPEPSTGAPKPEPSTG 646
>gi|189516679|ref|XP_697084.3| PREDICTED: hypothetical protein LOC568650 [Danio rerio]
Length = 1762
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 127/300 (42%), Gaps = 72/300 (24%)
Query: 201 LVVGAAAAGAAVAVKKATAA---KKTDKPGPAAKP---ASKPLAKTTTT----KTTTAAK 250
L GA + A KK T KKT KP A+ P AKT T K A+
Sbjct: 96 LTNGAQKSQANGVTKKTTTGSLDKKTSTTAGPKKPVGSATAPTAKTPTKVAEKKPLGTAR 155
Query: 251 PAISPVKKTATT-TAKPAPKPATKPA----PKPTTAAPKSTTTAPKPAPVR--------- 296
PA +P TT TA+P K PA PKP T AP AP+PA
Sbjct: 156 PASAPSNGVKTTGTAQPIKKAPAAPANGLKPKPKTTAP-----APRPATASTTKSSTTDA 210
Query: 297 -KPVASTITKTATSTVSAAPKPSAPKP------------------AAPKKPVAAPAPKPR 337
KP + ++ S +A P+APKP A PK P P P
Sbjct: 211 PKPSVAKTARSVGSVPAARSSPAAPKPATPTTASKTPTSTSRPTTATPKTPSTTAKPSPA 270
Query: 338 PATAAPAPK--------PLTNGVTKRPVSATTTASRTSSSSVTSASAAKPAAPRVPLSQR 389
TA P+ + P+ V+K +S+T +T+SS +T + +KPA P P S
Sbjct: 271 KTTAPPSGRTPTPKTTTPVKKDVSK--LSSTPAPKKTTSSPLTRPATSKPAKPDTPKSAL 328
Query: 390 TSAAKPAT-KPATA---------KP----STTSKPTTASKPATATRPATTTSKPATTTST 435
T+ A+ A+ KP+TA KP +T SK +AS T T+P+T TS P T +
Sbjct: 329 TAKAESASKKPSTASKAADVKTSKPKESKATPSKEVSASPKTTGTKPSTKTSSPKKTVGS 388
>gi|406606893|emb|CCH41747.1| putative secreted protein [Wickerhamomyces ciferrii]
Length = 687
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 18/89 (20%)
Query: 266 PAPKP---ATKPAPKPTTAAPKSTTTAPKPAPVRKPVASTITKTATSTVSAAPKPS---- 318
PAPKP A KPAP AP ++ APKPAP A S APKP+
Sbjct: 498 PAPKPSSEAPKPAPSSGAPAPGPSSEAPKPAPSSG-------APAPGPSSEAPKPAPSSG 550
Query: 319 APKPAAPKKPVAAPAPKPRPATAAPAPKP 347
AP PA P ++ AP P P++ APAP P
Sbjct: 551 APAPAGP----SSEAPAPAPSSGAPAPAP 575
>gi|51950578|gb|AAA70222.2| putative ORF2 [Drosophila melanogaster]
Length = 1219
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 678 IYTDASKKNEKVGAAWFCPTYKSKACFKLHPATSTYTAEVIGIWEALKYSASLKNNEILI 737
I+TD SK N + A T K L P +S T+E I I EA++ + + + + +I
Sbjct: 951 IFTDGSKINYTISFAITTETDVLKYGI-LPPYSSVLTSETIAILEAIELTKN-RRGKFII 1008
Query: 738 LTDSKSACQKLSKNCLNTT-PTHLELEILSSYKHLQNTCKTVKLAWIKGHEGIKGNVEVD 796
+DS SA + N+ P+ + I Q+ K +K+ WI GH GIKGN D
Sbjct: 1009 CSDSLSAVDSIQNTNNNSFYPSRIRSLIT------QHAPK-IKIMWIPGHSGIKGNELAD 1061
Query: 797 RLAKYAT 803
+ AK A+
Sbjct: 1062 QAAKSAS 1068
>gi|260796019|ref|XP_002593002.1| hypothetical protein BRAFLDRAFT_117784 [Branchiostoma floridae]
gi|229278226|gb|EEN49013.1| hypothetical protein BRAFLDRAFT_117784 [Branchiostoma floridae]
Length = 1602
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 223 TDKPGPAAKPASKPLAKTTTTK---TTTAAKPA-ISPVKKTATT--TAKPAP-KPATKPA 275
TDKP P A P KP T K T KPA +P K A T T KPAP P KPA
Sbjct: 74 TDKPAPTA-PTDKPAPTAPTDKPAPTAPVDKPAPTAPTDKPAPTAPTDKPAPTAPTDKPA 132
Query: 276 PKPTTAAPKSTTTAPKPAPV---RKPVASTITKTATSTVSAA----------PKPSAP-- 320
P T P+ T A KPAP KP + T T T A+ P P+AP
Sbjct: 133 PTAPTDKPEPTAPADKPAPTAPTDKPAPTAPTDTPAPTAPASTPLPAAPVDKPAPTAPTD 192
Query: 321 KPA--APKKPVAAPAPKPRPATAAPAPKPLTNGVTKRPVSATTTASRTSSSSVTSASAAK 378
KPA AP P +PAP+P P P +P+T P + A ++ S + AK
Sbjct: 193 KPAPTAPSAPKDSPAPEPTPT--KPTAEPVTTKPKTEPATTKPKAGPETAKSTAEPAPAK 250
Query: 379 PAAPRVPLSQRTSA--AKPA----------TKPATAKPSTTSKPTTASKPATATRPATTT 426
P A P + A AKP TK K + T KP++ K +T P T
Sbjct: 251 PKAGPAPEKAKDEAGPAKPDDKLKKEVGTPTKEKAQKKTETVKPSSDRK-TLSTVPEETE 309
Query: 427 SKPATTTSTDIEDEMNQP 444
K TD +D++ +P
Sbjct: 310 GK---NLETDSKDKVTEP 324
>gi|260824625|ref|XP_002607268.1| hypothetical protein BRAFLDRAFT_125174 [Branchiostoma floridae]
gi|229292614|gb|EEN63278.1| hypothetical protein BRAFLDRAFT_125174 [Branchiostoma floridae]
Length = 2643
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 101/232 (43%), Gaps = 42/232 (18%)
Query: 217 ATAAKKTDKPGPAAKPASKPLAKTTTTKTTTAAKPAISPVKKTATTTAKPAP---KPATK 273
ATA++ T KP P A S+PL TTT +TT V T+ T KPAP +P T
Sbjct: 2411 ATASEATTKPAPTA---SEPL--TTTQDSTT-------EVGTTSEATTKPAPTSSEPLTT 2458
Query: 274 PAPKPTTAAPKSTTTAPKPAP-VRKPVASTITKTA----TSTVSAAPKPSAPKPAAPKKP 328
T A S T KPAP +P+ +T T TS + P P+A +P +
Sbjct: 2459 THESTTEVATTSEATT-KPAPTASEPLTTTQNSTTEVATTSEATTKPAPTASEPLTTTQD 2517
Query: 329 VAAPAPKPRPATAAPAP---KPLTNGVTKRPVSATTTASRTSSSSVTSASAAKPA-APRV 384
AT PAP +PLT TT T+ TS + KPA
Sbjct: 2518 STTEVGTTSEATTKPAPTASEPLT-----------TTQDSTTEVGTTSEATTKPAPTASE 2566
Query: 385 PLSQRTSAAKPATKPATAKPSTTSKPTTASKPATATRPATT---TSKPATTT 433
PL T+ T+ T +TT TAS+P T T+ +TT T+ ATT+
Sbjct: 2567 PL---TTTQDSTTEVGTTSEATTKPAPTASEPLTTTQNSTTEVGTTSEATTS 2615
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 33/199 (16%)
Query: 258 KTATTTAKPAP---KPATKPAPKPTTAAPKSTTTAPKPAP-VRKPVASTITKTATSTVSA 313
KT+ T KPAP +P T T A S T KPAP +P+ T T+ +T+ V+
Sbjct: 2355 KTSEATTKPAPTSSEPLTTTHESTTEVATTSEATTQKPAPTASEPL--TTTQNSTTEVAT 2412
Query: 314 A------PKPSAPKPAAPKKPVAAPAPKPRPATAAPAPKPLTNGVTKRPVSATTTASRTS 367
A P P+A +P + AT PAP + P+ TTT T+
Sbjct: 2413 ASEATTKPAPTASEPLTTTQDSTTEVGTTSEATTKPAP------TSSEPL--TTTHESTT 2464
Query: 368 SSSVTSASAAKPA-APRVPL--SQRTSAAKPATKPATAKPS-TTSKPTTASKPAT----- 418
+ TS + KPA PL +Q ++ T AT KP+ T S+P T ++ +T
Sbjct: 2465 EVATTSEATTKPAPTASEPLTTTQNSTTEVATTSEATTKPAPTASEPLTTTQDSTTEVGT 2524
Query: 419 ----ATRPATTTSKPATTT 433
T+PA T S+P TTT
Sbjct: 2525 TSEATTKPAPTASEPLTTT 2543
>gi|38260684|gb|AAR15498.1| pollen coat oleosin-glycine rich protein [Arabidopsis arenosa]
Length = 1368
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 66/119 (55%), Gaps = 22/119 (18%)
Query: 230 AKPASKPLAKTTTTKTT-----TAAKPAISPVKKT-ATTTAKPAPKPATKPAPKPTTAAP 283
+KP +KP+AK TT T + AKPA P K A +KPA KPA+KPA KPTT
Sbjct: 1252 SKPTTKPVAKPTTKPVTKPAAKSVAKPAAKPTSKPIAKPASKPAAKPASKPALKPTT--- 1308
Query: 284 KSTTTAPKPA--PVRKPVASTITKTATSTVSAAPKPSAPKPAAPKKPVAAPAPKPRPAT 340
T+ PKPA P KP+A K ++ KP+A KP + KP+ P KP+PAT
Sbjct: 1309 -KPTSKPKPAAKPTSKPIAKPTAKPSS-------KPAA-KPTS--KPITKPTSKPKPAT 1356
>gi|417000968|ref|ZP_11940962.1| SpoIID/LytB domain protein [Veillonella parvula ACS-068-V-Sch12]
gi|333975842|gb|EGL76719.1| SpoIID/LytB domain protein [Veillonella parvula ACS-068-V-Sch12]
Length = 596
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 193 LAAKVAGALVVGAAAAGAAVAVKKATAAKKTDKPGPAAKPASKPLAKTTTTKTTT----A 248
+A G + G + A A K T T KP P + ++ ++K TTK ++ A
Sbjct: 11 MATLFLGVNIGGVSIAHGATLQNKGTVV--TKKPTPKSTVSNTTVSKVNTTKKSSFRPLA 68
Query: 249 AKPAISPVKKTATTTAKPAPKPATKPAPKPTTAAPKSTTTAPKPAPVRKPVASTITKTAT 308
KPA PV T T + A KP+ KP A +T T KP + KPV++T +T
Sbjct: 69 TKPAAKPVATTKTVSKSTATSTVVKPSAKPVNVAKPATAT--KPVTMAKPVSAT---KST 123
Query: 309 STVSAAPKPSAPKPAAPKKPVAAPAPKPRPATAAPAPKPLTNG 351
ST ++ +A K AA K A P ATA PA KP G
Sbjct: 124 STAKSSTNATATKSAATGKATTATKPAA-SATAKPATKPAVTG 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.306 0.121 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,661,418,349
Number of Sequences: 23463169
Number of extensions: 567540967
Number of successful extensions: 10303754
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 31015
Number of HSP's successfully gapped in prelim test: 163577
Number of HSP's that attempted gapping in prelim test: 5425290
Number of HSP's gapped (non-prelim): 1776843
length of query: 821
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 670
effective length of database: 8,816,256,848
effective search space: 5906892088160
effective search space used: 5906892088160
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 81 (35.8 bits)