Query psy1675
Match_columns 179
No_of_seqs 200 out of 921
Neff 5.6
Searched_HMMs 13730
Date Fri Aug 16 21:02:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1675.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1675hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gq2a2 c.58.1.3 (A:23-279) Mi 100.0 3E-36 2.2E-40 253.3 4.4 114 12-125 123-239 (257)
2 d1pj3a2 c.58.1.3 (A:21-279) Mi 100.0 6.6E-36 4.8E-40 251.5 5.1 114 12-125 125-241 (259)
3 d1o0sa2 c.58.1.3 (A:2-295) Mit 100.0 1.5E-35 1.1E-39 252.6 4.5 117 9-125 157-276 (294)
4 d1gq2a2 c.58.1.3 (A:23-279) Mi 99.8 1.2E-23 8.6E-28 176.3 -1.8 100 1-121 155-257 (257)
5 d1pj3a2 c.58.1.3 (A:21-279) Mi 99.8 4.2E-23 3.1E-27 173.1 -2.0 100 1-121 157-259 (259)
6 d1o0sa2 c.58.1.3 (A:2-295) Mit 99.8 9.3E-23 6.8E-27 173.3 -3.1 100 1-121 192-294 (294)
7 d1gq2a1 c.2.1.7 (A:280-580) Mi 98.4 1.9E-09 1.4E-13 91.3 -6.6 119 50-168 95-265 (298)
8 d1pj3a1 c.2.1.7 (A:280-573) Mi 98.3 5.4E-09 3.9E-13 88.3 -4.9 121 49-169 97-269 (294)
9 d1o0sa1 c.2.1.7 (A:296-603) Mi 98.3 1.8E-08 1.3E-12 85.5 -2.2 115 50-168 95-264 (308)
10 d1vl6a1 c.2.1.7 (A:155-376) Ma 62.1 1.3 9.8E-05 34.3 1.5 24 130-154 198-221 (222)
11 d1qrjb1 a.28.3.1 (B:131-214) H 27.9 21 0.0015 23.2 2.9 29 81-111 2-30 (84)
12 d1kr7a_ a.1.1.4 (A:) Nerve tis 24.4 18 0.0013 23.8 2.0 40 75-114 58-99 (110)
13 d2eiaa1 a.28.3.1 (A:148-222) E 22.6 32 0.0023 21.6 2.9 27 83-111 4-30 (75)
No 1
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}
Probab=100.00 E-value=3e-36 Score=253.31 Aligned_cols=114 Identities=51% Similarity=0.833 Sum_probs=99.6
Q ss_pred hhcCCCCCCCeeceEEeccCCccc---cccCCCCccccceeeeeeccCCCCCcccceeccCCCCchhcccCccccccccc
Q psy1675 12 TALAGIKPHQCLPITLDVGTNTQG---FSKPSMGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQQLLDDPLYIGLRQR 88 (179)
Q Consensus 12 t~~~gi~p~~~lpi~ldvGt~~~~---Lg~~gmgI~~gKl~Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~~yig~r~~ 88 (179)
.....|..+.+--|++..|++..| ||++||+|++||++|||+||||+|++||||+||+||||++||+||+|+|+|++
T Consensus 123 ~il~nwp~~~V~~iVVTDG~rILGlGD~G~~Gm~I~~gKl~lyta~~Gi~P~~~LPv~LDvGTnNe~LL~DP~YlG~R~~ 202 (257)
T d1gq2a2 123 TMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHK 202 (257)
T ss_dssp HHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSC
T ss_pred HHHHhCCCCCeeEEEEecCceeeecCCcCcCccchhhhHHHHHHHhcCCCHhhcCCeeecCCCChHHHhcCcccccccCC
Confidence 444444333344455666888777 67788999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHhCCCceeEeccccccc
Q psy1675 89 RTTGQAYDDFIEEFMQAVVARYGQHVLIQTLSDLVTE 125 (179)
Q Consensus 89 R~~g~~y~~f~~~f~~av~~~y~p~~liqFeD~~vt~ 125 (179)
|++|++|++|+|||++++.++|+|+++|||||+...+
T Consensus 203 R~~g~eY~~fvdefv~av~~~~p~~~~i~~EDf~~~n 239 (257)
T d1gq2a2 203 RIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANAN 239 (257)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHH
T ss_pred CCcchHHHHHHHHHHHHHHHhCCCCCEEehhhcCCch
Confidence 9999999999999999999999889999999865554
No 2
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.6e-36 Score=251.47 Aligned_cols=114 Identities=43% Similarity=0.749 Sum_probs=99.9
Q ss_pred hhcCCCCCCCeeceEEeccCCccc---cccCCCCccccceeeeeeccCCCCCcccceeccCCCCchhcccCccccccccc
Q psy1675 12 TALAGIKPHQCLPITLDVGTNTQG---FSKPSMGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQQLLDDPLYIGLRQR 88 (179)
Q Consensus 12 t~~~gi~p~~~lpi~ldvGt~~~~---Lg~~gmgI~~gKl~Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~~yig~r~~ 88 (179)
.....|+-..+--|++..|++..| ||++||+|++||++|||+||||+|++||||+||+||||++||+||+|+|+|++
T Consensus 125 ~il~nwp~~~v~~ivVTDG~rILGlGDlG~~Gm~I~~gKl~lyta~~Gi~P~~~lPv~lDvGTnNe~LL~DP~YlG~R~~ 204 (259)
T d1pj3a2 125 SIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQK 204 (259)
T ss_dssp HHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSC
T ss_pred HHHHhCCccCceEEEEecCceeecccccCcchhhHHHhHHHHHHHcCCCChhhccceEEecCCcHHHHhcCcccccccCC
Confidence 344444333344455666888777 67788999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHhCCCceeEeccccccc
Q psy1675 89 RTTGQAYDDFIEEFMQAVVARYGQHVLIQTLSDLVTE 125 (179)
Q Consensus 89 R~~g~~y~~f~~~f~~av~~~y~p~~liqFeD~~vt~ 125 (179)
|.+|++|++|+|||+.+++++|||++++||||+...+
T Consensus 205 R~~g~~Yd~fidefv~av~~~~gp~~li~~EDf~~~n 241 (259)
T d1pj3a2 205 RDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHN 241 (259)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHH
T ss_pred CCcchHHHHHHHHHHHHHHHhcCCCcEEehhhcCCch
Confidence 9999999999999999999999999999999865555
No 3
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Probab=100.00 E-value=1.5e-35 Score=252.60 Aligned_cols=117 Identities=42% Similarity=0.782 Sum_probs=103.5
Q ss_pred hhhhhcCCCCCCCeeceEEeccCCccc---cccCCCCccccceeeeeeccCCCCCcccceeccCCCCchhcccCcccccc
Q psy1675 9 SLYTALAGIKPHQCLPITLDVGTNTQG---FSKPSMGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQQLLDDPLYIGL 85 (179)
Q Consensus 9 ~l~t~~~gi~p~~~lpi~ldvGt~~~~---Lg~~gmgI~~gKl~Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~~yig~ 85 (179)
.+......|....+--|++..|+++.| ||++||+|++||++|||+||||+|++||||+||+||||++||+||+|+|+
T Consensus 157 ~i~~il~nwp~~~V~~iVVTDG~rILGlGDlG~~Gm~I~~GKl~lyta~~Gi~P~~~LPV~LDvGTnNe~LL~DPlYlG~ 236 (294)
T d1o0sa2 157 KIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGL 236 (294)
T ss_dssp HHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSC
T ss_pred hHHHHHhcCCcccceEEEEecCcceecccCcCcccchhhhhHHHHHHHhcCCChhhccceEeecCCChHHhhcCcccccc
Confidence 345555665545455566777888877 67788999999999999999999999999999999999999999999999
Q ss_pred cccCCCchhhHHHHHHHHHHHHHHhCCCceeEeccccccc
Q psy1675 86 RQRRTTGQAYDDFIEEFMQAVVARYGQHVLIQTLSDLVTE 125 (179)
Q Consensus 86 r~~R~~g~~y~~f~~~f~~av~~~y~p~~liqFeD~~vt~ 125 (179)
|++|.+|++|++|+|||+.|+.++|||+++|||||+...+
T Consensus 237 R~~R~~g~~Yd~fidefv~av~~~fgp~~li~~EDf~~~n 276 (294)
T d1o0sa2 237 RHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPN 276 (294)
T ss_dssp SSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHH
T ss_pred cCCCCCchHHHHHHHHHHHHHHHhhCCCCEEeehhCCChh
Confidence 9999999999999999999999999999999999865554
No 4
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}
Probab=99.85 E-value=1.2e-23 Score=176.30 Aligned_cols=100 Identities=37% Similarity=0.633 Sum_probs=91.4
Q ss_pred CCccchhhhhhhhcCCCCCCCeeceEEeccCCccccccCCCCccccceeeeeeccCCCCCcccceeccCCCCchhcccCc
Q psy1675 1 MGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQGFSKPSMGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQQLLDDP 80 (179)
Q Consensus 1 ~~i~~~kl~l~t~~~gi~p~~~lpi~ldvGt~~~~Lg~~gmgI~~gKl~Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~ 80 (179)
|+|++|||+|||+||||+|++||||+|||||||+.|+.|++++ |.+..|+ .|..|+++++
T Consensus 155 m~I~~gKl~lyta~~Gi~P~~~LPv~LDvGTnNe~LL~DP~Yl------------G~R~~R~------~g~eY~~fvd-- 214 (257)
T d1gq2a2 155 MGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYI------------GLRHKRI------RGQAYDDLLD-- 214 (257)
T ss_dssp GHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCC------------SCSSCCC------CTHHHHHHHH--
T ss_pred cchhhhHHHHHHHhcCCCHhhcCCeeecCCCChHHHhcCcccc------------cccCCCC------cchHHHHHHH--
Confidence 7899999999999999999999999999999999999999877 8899998 9999999998
Q ss_pred ccccccccCCCc-h--hhHHHHHHHHHHHHHHhCCCceeEeccc
Q psy1675 81 LYIGLRQRRTTG-Q--AYDDFIEEFMQAVVARYGQHVLIQTLSD 121 (179)
Q Consensus 81 ~yig~r~~R~~g-~--~y~~f~~~f~~av~~~y~p~~liqFeD~ 121 (179)
-|+...+++++. . +||||..+.+..++++|+ +.+++||||
T Consensus 215 efv~av~~~~p~~~~i~~EDf~~~na~~~L~~yr-~~~~~FNDD 257 (257)
T d1gq2a2 215 EFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYR-NKYCTFNDD 257 (257)
T ss_dssp HHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHT-TTSEEEETT
T ss_pred HHHHHHHHhCCCCCEEehhhcCCchHHHHHHHHc-cCCCccCCC
Confidence 777666666663 3 999999999999999995 788999997
No 5
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=4.2e-23 Score=173.07 Aligned_cols=100 Identities=32% Similarity=0.552 Sum_probs=91.0
Q ss_pred CCccchhhhhhhhcCCCCCCCeeceEEeccCCccccccCCCCccccceeeeeeccCCCCCcccceeccCCCCchhcccCc
Q psy1675 1 MGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQGFSKPSMGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQQLLDDP 80 (179)
Q Consensus 1 ~~i~~~kl~l~t~~~gi~p~~~lpi~ldvGt~~~~Lg~~gmgI~~gKl~Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~ 80 (179)
|+|++|||+|||+||||+|++||||+|||||||+.|+.|++++ |++..|+ .|..|+++++
T Consensus 157 m~I~~gKl~lyta~~Gi~P~~~lPv~lDvGTnNe~LL~DP~Yl------------G~R~~R~------~g~~Yd~fid-- 216 (259)
T d1pj3a2 157 MGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYM------------GLYQKRD------RTQQYDDLID-- 216 (259)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCC------------SCSSCCC------CSHHHHHHHH--
T ss_pred hhHHHhHHHHHHHcCCCChhhccceEEecCCcHHHHhcCcccc------------cccCCCC------cchHHHHHHH--
Confidence 7899999999999999999999999999999999999999877 8999998 9999999998
Q ss_pred ccccccccCC-Cch--hhHHHHHHHHHHHHHHhCCCceeEeccc
Q psy1675 81 LYIGLRQRRT-TGQ--AYDDFIEEFMQAVVARYGQHVLIQTLSD 121 (179)
Q Consensus 81 ~yig~r~~R~-~g~--~y~~f~~~f~~av~~~y~p~~liqFeD~ 121 (179)
-|+...++++ +.. |||||..+.+..++++|+ +.+++||||
T Consensus 217 efv~av~~~~gp~~li~~EDf~~~na~~~L~~yr-~~~~~fNDD 259 (259)
T d1pj3a2 217 EFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYR-EKYCTFNDD 259 (259)
T ss_dssp HHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHT-TTSSEEEHH
T ss_pred HHHHHHHHhcCCCcEEehhhcCCchHHHHHHHhc-cCCCccCCC
Confidence 6666666665 544 999999999999999996 778999997
No 6
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Probab=99.82 E-value=9.3e-23 Score=173.32 Aligned_cols=100 Identities=32% Similarity=0.607 Sum_probs=91.1
Q ss_pred CCccchhhhhhhhcCCCCCCCeeceEEeccCCccccccCCCCccccceeeeeeccCCCCCcccceeccCCCCchhcccCc
Q psy1675 1 MGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQGFSKPSMGIPVGKLSLYTALAGIKPHQCLPITLDVGTNTQQLLDDP 80 (179)
Q Consensus 1 ~~i~~~kl~l~t~~~gi~p~~~lpi~ldvGt~~~~Lg~~gmgI~~gKl~Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~ 80 (179)
|+|++|||+|||+||||+|++||||+|||||||+.|+.|++++ |++..|+ .|..|+++++
T Consensus 192 m~I~~GKl~lyta~~Gi~P~~~LPV~LDvGTnNe~LL~DPlYl------------G~R~~R~------~g~~Yd~fid-- 251 (294)
T d1o0sa2 192 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYI------------GLRHKRV------RGKDYDTLLD-- 251 (294)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCC------------SCSSCCC------CSHHHHHHHH--
T ss_pred chhhhhHHHHHHHhcCCChhhccceEeecCCChHHhhcCcccc------------cccCCCC------CchHHHHHHH--
Confidence 7899999999999999999999999999999999999999877 9999998 9999999998
Q ss_pred ccccccccCC-Cch--hhHHHHHHHHHHHHHHhCCCceeEeccc
Q psy1675 81 LYIGLRQRRT-TGQ--AYDDFIEEFMQAVVARYGQHVLIQTLSD 121 (179)
Q Consensus 81 ~yig~r~~R~-~g~--~y~~f~~~f~~av~~~y~p~~liqFeD~ 121 (179)
-|+...++++ +.. +||||..+.+..++++|+ +.+++||||
T Consensus 252 efv~av~~~fgp~~li~~EDf~~~nA~~iL~kyr-~~~~~FNDD 294 (294)
T d1o0sa2 252 NFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQ-DKYTMFNDD 294 (294)
T ss_dssp HHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHT-TTSEEEEHH
T ss_pred HHHHHHHHhhCCCCEEeehhCCChhHHHHHHHhc-ccCCccCCC
Confidence 6776666665 554 999999999999999995 788999997
No 7
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}
Probab=98.37 E-value=1.9e-09 Score=91.28 Aligned_cols=119 Identities=26% Similarity=0.324 Sum_probs=88.9
Q ss_pred eeeeccCCCCCcccceeccCCCCchhcccCcccccccc--------------------cCCCchhhHHHHHHHHHHHH--
Q psy1675 50 LYTALAGIKPHQCLPITLDVGTNTQQLLDDPLYIGLRQ--------------------RRTTGQAYDDFIEEFMQAVV-- 107 (179)
Q Consensus 50 Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~~yig~r~--------------------~R~~g~~y~~f~~~f~~av~-- 107 (179)
+-.+...++|+.+|+++-..|.+++|++++|.-+..|+ +|+.|++.++.+++|.....
T Consensus 95 l~~~i~~vkptvliG~s~~~g~ft~evv~~ma~~~~~PIIFaLSNPt~~~E~~~~~a~~wt~G~ai~AsGspf~pv~~~~ 174 (298)
T d1gq2a1 95 LEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPS 174 (298)
T ss_dssp HHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTT
T ss_pred hHHHhhccChheeEecccccCcCCHHHHHHHHhhCCCCEEEEccCCCCcCCCCHHHHhhhcccceEEeecCCCCCeEecC
Confidence 44667789999999999999999999998777666666 45555555666666621110
Q ss_pred -HHhCC----Cce--------------eEecc-----------ccccccccccccCCCCCcccchhhHHHHHHHHHHHHH
Q psy1675 108 -ARYGQ----HVL--------------IQTLS-----------DLVTEADLDSGCLYPPPNIIKDCSLKIAAKLVEQAFK 157 (179)
Q Consensus 108 -~~y~p----~~l--------------iqFeD-----------~~vt~~a~~~g~lyppl~~Ir~~sl~IA~~v~~~ay~ 157 (179)
+.|-| |++ -+..| +.++++++..+.+||++.++|++|..||..|+++|++
T Consensus 175 Grs~~pnQ~NN~~~FPGiglGal~~~A~~Itd~M~~aAA~alA~~v~~~~l~~g~i~P~~~~ir~vs~~VA~aVa~~A~~ 254 (298)
T d1gq2a1 175 GQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYR 254 (298)
T ss_dssp SCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCCHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCchhhhhhhHHHHHHHhhhhhCCHHHHHHHHHHHHHhcchhcCCCCceeCCcchHHHhHHHHHHHHHHHHHH
Confidence 11111 111 11122 6788889999999999999999999999999999999
Q ss_pred hCccccCCccc
Q psy1675 158 DGTATKVGTAT 168 (179)
Q Consensus 158 ~gla~~~~~~~ 168 (179)
+|+|++.+.|+
T Consensus 255 ~GvA~~~~~~~ 265 (298)
T d1gq2a1 255 NNTASTYPQPE 265 (298)
T ss_dssp TTCCCCSSCCS
T ss_pred cCCCCCCCChH
Confidence 99999988876
No 8
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.32 E-value=5.4e-09 Score=88.26 Aligned_cols=121 Identities=20% Similarity=0.220 Sum_probs=86.2
Q ss_pred eeeeeccCCCCCcccceeccCCCCchhcccCcccccccc--------------------cCCCchhhHHHHHHHHHHHH-
Q psy1675 49 SLYTALAGIKPHQCLPITLDVGTNTQQLLDDPLYIGLRQ--------------------RRTTGQAYDDFIEEFMQAVV- 107 (179)
Q Consensus 49 ~Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~~yig~r~--------------------~R~~g~~y~~f~~~f~~av~- 107 (179)
+|-.+..-++|+.+|+++-..|.+++++++-|.-++.|+ +|+.|++.++.+++|.....
T Consensus 97 ~L~e~i~~~kptvliG~S~~~g~ft~evi~~Ma~~~~~PIIFaLSNPt~~~e~~~~~a~~~t~grai~asGspf~~v~~~ 176 (294)
T d1pj3a1 97 TFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLT 176 (294)
T ss_dssp SHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECT
T ss_pred HHHHHHHhcCCceEEEecCCCCcCCHHHHHHHHhcCCCcEEEEccCCCCcCCcCHHHHHhhccCceEeecCCccCCeEeC
Confidence 355555667999999999999999999996554455555 33444445555555522110
Q ss_pred --HHhCC----Cce--------------eEecc-----------ccccccccccccCCCCCcccchhhHHHHHHHHHHHH
Q psy1675 108 --ARYGQ----HVL--------------IQTLS-----------DLVTEADLDSGCLYPPPNIIKDCSLKIAAKLVEQAF 156 (179)
Q Consensus 108 --~~y~p----~~l--------------iqFeD-----------~~vt~~a~~~g~lyppl~~Ir~~sl~IA~~v~~~ay 156 (179)
+.|-| |++ -+..| +.++++++..+.+||++.++|++|..||..|+++|+
T Consensus 177 ~Gr~~~pnQ~NN~~iFPGiglGal~~~A~~Itd~M~~aAA~aLA~~v~~~~l~~~~i~P~~~~ir~vs~~VA~aVa~~A~ 256 (294)
T d1pj3a1 177 DGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLY 256 (294)
T ss_dssp TSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTTCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHH
T ss_pred CCcEecCCCCceeccccchhhHHHhcCCCCcCHHHHHHHHHHHHhhCCccccCCCeecCCCccHHHHHHHHHHHHHHHHH
Confidence 11111 111 11123 678888999999999999999999999999999999
Q ss_pred HhCccccCCccce
Q psy1675 157 KDGTATKVGTATL 169 (179)
Q Consensus 157 ~~gla~~~~~~~~ 169 (179)
+.|+|++.+.|+-
T Consensus 257 ~~g~A~~~~~~~~ 269 (294)
T d1pj3a1 257 ANKMAFRYPEPED 269 (294)
T ss_dssp HTTCCCCSSCCSS
T ss_pred HcCCCCCCCChHH
Confidence 9999999888763
No 9
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Probab=98.29 E-value=1.8e-08 Score=85.46 Aligned_cols=115 Identities=20% Similarity=0.261 Sum_probs=84.0
Q ss_pred eeeeccCCCCCcccceeccCCCCchhcccCcccccccc--------------------cCCCchhhHHHHHHHHH-----
Q psy1675 50 LYTALAGIKPHQCLPITLDVGTNTQQLLDDPLYIGLRQ--------------------RRTTGQAYDDFIEEFMQ----- 104 (179)
Q Consensus 50 Ly~a~~Gi~P~~~lpv~ld~Gt~n~elL~d~~yig~r~--------------------~R~~g~~y~~f~~~f~~----- 104 (179)
|-.+..+++|+.+++++...|.+++++++.|.-+..|+ +|..|+..++.+++|..
T Consensus 95 l~~~i~~~kptvliG~s~~~g~ft~evv~~Ma~~~~~PIIFaLSNPtp~~E~~~eda~~~t~G~ai~AtGSpfp~V~~~G 174 (308)
T d1o0sa1 95 ILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNG 174 (308)
T ss_dssp HHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETT
T ss_pred HHHHHhccccccEEecccccCCCCHHHHHHHHhhCCCcEEEEccCCCCCCCCCHHHHHhhccCcEEEecCCCCCCeeecC
Confidence 55667889999999999999999999997665555555 23334444444444311
Q ss_pred -------------------HHHHHhCCCceeEecc-----------ccccccccccccCCCCCcccchhhHHHHHHHHHH
Q psy1675 105 -------------------AVVARYGQHVLIQTLS-----------DLVTEADLDSGCLYPPPNIIKDCSLKIAAKLVEQ 154 (179)
Q Consensus 105 -------------------av~~~y~p~~liqFeD-----------~~vt~~a~~~g~lyppl~~Ir~~sl~IA~~v~~~ 154 (179)
.++..- .+ +..| +.++++.+..+.+||++.++|++|..||..|+++
T Consensus 175 r~~~p~Q~NN~liFPGIglGal~~~-A~---~Itd~M~~aAA~aLA~~v~~~~l~~g~i~P~~~~~r~vs~~VA~AVa~~ 250 (308)
T d1o0sa1 175 HTYKPGQGNNAYIFPGVALGTILFQ-IR---HVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKY 250 (308)
T ss_dssp EEECCEECCGGGTHHHHHHHHHHHT-BS---CCCHHHHHHHHHHHHHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHH
T ss_pred ceecccccceeeeccchheeeeecc-cc---cCCHHHHHHHHHHHHHhcCcccCCCCCCCCCCccHhhhhHHHHHHHHHH
Confidence 011000 00 0122 6788889999999999999999999999999999
Q ss_pred HHHhCccccCCccc
Q psy1675 155 AFKDGTATKVGTAT 168 (179)
Q Consensus 155 ay~~gla~~~~~~~ 168 (179)
|+++|+|+..+.||
T Consensus 251 A~~~GvA~~~~~~~ 264 (308)
T d1o0sa1 251 CYKNGTANLYPQPE 264 (308)
T ss_dssp HHHTTCBCSSSCCS
T ss_pred HHHcCCCCCCCChH
Confidence 99999999877776
No 10
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}
Probab=62.13 E-value=1.3 Score=34.32 Aligned_cols=24 Identities=13% Similarity=0.153 Sum_probs=21.4
Q ss_pred cccCCCCCcccchhhHHHHHHHHHH
Q psy1675 130 SGCLYPPPNIIKDCSLKIAAKLVEQ 154 (179)
Q Consensus 130 ~g~lyppl~~Ir~~sl~IA~~v~~~ 154 (179)
.+++||++.++| +|..||..|++.
T Consensus 198 ~~~i~P~~~~~r-Vs~~VA~aVa~~ 221 (222)
T d1vl6a1 198 PERIIPEAFDMK-VHLNVYTAVKGS 221 (222)
T ss_dssp TTBSSCCTTCHH-HHHHHHHHHHHC
T ss_pred CCcccCCCCChh-HHHHHHHHHHhh
Confidence 478999999998 999999999874
No 11
>d1qrjb1 a.28.3.1 (B:131-214) HTLV-I capsid protein {Human T-cell leukemia virus type 1 [TaxId: 11908]}
Probab=27.92 E-value=21 Score=23.16 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=22.0
Q ss_pred ccccccccCCCchhhHHHHHHHHHHHHHHhC
Q psy1675 81 LYIGLRQRRTTGQAYDDFIEEFMQAVVARYG 111 (179)
Q Consensus 81 ~yig~r~~R~~g~~y~~f~~~f~~av~~~y~ 111 (179)
-|...++. +.+-|.||+|.|..++....+
T Consensus 2 s~~~IkQG--pkEpf~dfVdRl~~a~~~~~~ 30 (84)
T d1qrjb1 2 SWASILQG--LEEPYHAFVERLNIALDNGLP 30 (84)
T ss_dssp SGGGCCBC--TTSCHHHHHHHHHHHHHTTCC
T ss_pred ccccCccC--CCCcHHHHHHHHHHHHHhhcC
Confidence 45555654 778999999999999876654
No 12
>d1kr7a_ a.1.1.4 (A:) Nerve tissue mini-hemoglobin (neural globin) {Milky ribbon-worm (Cerebratulus lacteus) [TaxId: 6221]}
Probab=24.44 E-value=18 Score=23.80 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=29.5
Q ss_pred hcccCcccccccccC--CCchhhHHHHHHHHHHHHHHhCCCc
Q psy1675 75 QLLDDPLYIGLRQRR--TTGQAYDDFIEEFMQAVVARYGQHV 114 (179)
Q Consensus 75 elL~d~~yig~r~~R--~~g~~y~~f~~~f~~av~~~y~p~~ 114 (179)
+.++|+--+|.+|.+ ++.++|+.+.+-++.++.+..+|+.
T Consensus 58 ~~ld~~~~Lg~~H~~~gV~~~~f~~~~~~L~~~l~~~~~~d~ 99 (110)
T d1kr7a_ 58 GGSADAAGLASRHKGRNVGSAEFHNAKACLAKACSAHGAPDL 99 (110)
T ss_dssp HTCCCHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HcccchHHHhhhhHhcCCCHHHHHHHHHHHHHHHHHHcCchh
Confidence 345666667888743 3445999999999999988887653
No 13
>d2eiaa1 a.28.3.1 (A:148-222) EIAV capsid protein p26 {Equine infectious anemia virus [TaxId: 11665]}
Probab=22.56 E-value=32 Score=21.58 Aligned_cols=27 Identities=15% Similarity=0.427 Sum_probs=20.4
Q ss_pred ccccccCCCchhhHHHHHHHHHHHHHHhC
Q psy1675 83 IGLRQRRTTGQAYDDFIEEFMQAVVARYG 111 (179)
Q Consensus 83 ig~r~~R~~g~~y~~f~~~f~~av~~~y~ 111 (179)
+..|+. +.+-|.||++.|..++.....
T Consensus 4 ~dIkQG--pkEpf~dfVdRl~~a~~~~~~ 30 (75)
T d2eiaa1 4 QNIRQG--AKEPYPEFVDRLLSQIKSEGH 30 (75)
T ss_dssp TTCCCC--TTCCHHHHHHHHHHHHHHTTC
T ss_pred cccccC--CCCCHHHHHHHHHHHHHhhcC
Confidence 334444 668999999999998877663
Done!