BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16751
(214 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 241 bits (615), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/161 (68%), Positives = 131/161 (81%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
I NACWV KHFTED+QTRQYRSLEVLI +GY+ ADIWS ACMAFELATGDYLFEPH
Sbjct: 221 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 280
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
+G+ YTRDEDH+A IIELLG +P+++I +G S EFFTKKG+L+HI LKPW L+ VLVE
Sbjct: 281 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 340
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
KY W+ E A GF++FL PML P+ RATAA+CL+HPWL +
Sbjct: 341 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 381
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 241 bits (615), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/161 (68%), Positives = 131/161 (81%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
I NACWV KHFTED+QTRQYRSLEVLI +GY+ ADIWS ACMAFELATGDYLFEPH
Sbjct: 237 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
+G+ YTRDEDH+A IIELLG +P+++I +G S EFFTKKG+L+HI LKPW L+ VLVE
Sbjct: 297 SGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVE 356
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
KY W+ E A GF++FL PML P+ RATAA+CL+HPWL +
Sbjct: 357 KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 231 bits (588), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/161 (66%), Positives = 124/161 (77%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
I NACWV KHFTED+QTRQYRS+EVLI AGY ADIWS ACMAFELATGDYLFEPH
Sbjct: 229 IADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPH 288
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
+G+ Y+RDEDH+AHIIELLG IP+ SG S EFF ++GELRHI LKPW L+ VLVE
Sbjct: 289 SGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVE 348
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
KY W E A F++FL PML P+ RA+A +CL+HPWL +
Sbjct: 349 KYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 389
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 112/161 (69%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
I NACW D+H+T +QTR+YRS EVL+ A + C ADIWS AC+ FEL TGD+LFEP
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
G +YT+D+DH+A IIELLG++P ++++G + FF +G LR+I LK W L VL E
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE 298
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
KY ++ + A+ S+FL PML DP+ RA A + HPWL++
Sbjct: 299 KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 112/161 (69%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
I NACW D+H+T +QTR+YRS EVL+ A + C ADIWS AC+ FEL TGD+LFEP
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVE 173
G +YT+D+DH+A IIELLG++P ++++G + FF +G LR+I LK W L VL E
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE 298
Query: 174 KYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
KY ++ + A+ S+FL PML DP+ RA A + HPWL++
Sbjct: 299 KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 57 YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
+ ++C+ + +Q+R YR+ EV++ A Y D+WS+ C+ EL TG Y P
Sbjct: 246 FGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLP---- 300
Query: 117 TYTRDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL---- 171
DE D LA +IELLG ++++ + R+ F + KG R+ D VL
Sbjct: 301 --GEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
Query: 172 --VEKYNWTPES------ARG-----FSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
K PES +G F +FL+ L +DP +R T L+HPWL+
Sbjct: 359 SRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 57 YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
+ ++C+ + +Q+R YR+ EV++ A Y D+WS+ C+ EL TG Y P
Sbjct: 246 FGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLP---- 300
Query: 117 TYTRDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL---- 171
DE D LA +IELLG ++++ + R+ F + KG R+ D VL
Sbjct: 301 --GEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
Query: 172 --VEKYNWTPES------ARG-----FSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
K PES +G F +FL+ L +DP +R T L+HPWL+
Sbjct: 359 SRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 57 YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
+ ++C+ + +Q+R YR+ EV++ A Y D+WS+ C+ EL TG Y P
Sbjct: 246 FGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLP---- 300
Query: 117 TYTRDE-DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL---- 171
DE D LA +IELLG ++++ + R+ F + KG R+ D VL
Sbjct: 301 --GEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGR 358
Query: 172 --VEKYNWTPES------ARG-----FSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
K PES +G F +FL+ L +DP +R T L+HPWL+
Sbjct: 359 SRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 35/192 (18%)
Query: 37 EDVQTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSV 96
+ +Q + +S L D G A + + + TRQYR+ EV++N G+D S+D+WS
Sbjct: 189 KKIQIYRTKSTGIKLIDFGC---ATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSF 245
Query: 97 ACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSS-EFFTKKGE 155
C+ EL TG LF H +HLA + ++ IPK ++ +++ + K E
Sbjct: 246 GCVLAELYTGSLLFRTH------EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDE 299
Query: 156 L--------------RHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRA 201
L +H+ P LY ++ + F +FL +L DP LR
Sbjct: 300 LKLAWPENASSINSIKHVKKCLP--LYKIIKHEL---------FCDFLYSILQIDPTLRP 348
Query: 202 TAADCLQHPWLQ 213
+ A+ L+H +L+
Sbjct: 349 SPAELLKHKFLE 360
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 40 QTRQYRSLPPFLFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACM 99
+ R RS+ + + +A + +H + V TR YR+ EV++ G+ D+WS+ C+
Sbjct: 183 KKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 242
Query: 100 AFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--- 156
FE G LF+ H + +HLA + +LG IP R+I+ + F+ +G L
Sbjct: 243 IFEYYVGFTLFQTHD------NREHLAMMERILGPIPSRMIRKTRKQKYFY--RGRLDWD 294
Query: 157 ------RHI-PGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQH 209
R++ KP Y E + + ML Y+P R T + LQH
Sbjct: 295 ENTSAGRYVRENCKPLRRY------LTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQH 348
Query: 210 PWL 212
P+
Sbjct: 349 PFF 351
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
+ + +A + +H T V TR YR EV++ G+ D+WS+ C+ FE G LF+ H
Sbjct: 215 VADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 274
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--------RHIP-GLKP 164
+ +HL + ++LG IP +I R ++F K G + R++ KP
Sbjct: 275 ------ENREHLVMMEKILGPIPSHMIHRT-RKQKYFYKGGLVWDENSSDGRYVKENCKP 327
Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
Y + + E + F + +R ML +DP R T A+ L HP+
Sbjct: 328 LKSYML-----QDSLEHVQLF-DLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
+ + +A + +H T V TR YR EV++ G+ D+WS+ C+ FE G LF+ H
Sbjct: 192 VADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 251
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--------RHIP-GLKP 164
+ +HL + ++LG IP +I R ++F K G + R++ KP
Sbjct: 252 ------ENREHLVMMEKILGPIPSHMIHRT-RKQKYFYKGGLVWDENSSDGRYVKENCKP 304
Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
Y + + E + F + +R ML +DP R T A+ L HP+
Sbjct: 305 LKSYML-----QDSLEHVQLF-DLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
+ + +A + +H T V TR YR EV++ G+ D+WS+ C+ FE G LF+ H
Sbjct: 183 VADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGEL--------RHIP-GLKP 164
+ +HL + ++LG IP +I R ++F K G + R++ KP
Sbjct: 243 ------ENREHLVMMEKILGPIPSHMIHRT-RKQKYFYKGGLVWDENSSDGRYVKENCKP 295
Query: 165 WDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
Y + + E + F + +R ML +DP R T A+ L HP+
Sbjct: 296 LKSYML-----QDSLEHVQLF-DLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
I + ++C + + + +Q+R YRS EVL+ YD + D+WS+ C+ E+ TG+ LF
Sbjct: 202 IVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF--- 258
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF------------TKKGE------ 155
+ + D + I+E+LG P I+ ++ +FF TK G+
Sbjct: 259 ---SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 156 ----LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
L +I G++ + T F + + ML YDPK R LQH +
Sbjct: 316 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375
Query: 212 LQ 213
+
Sbjct: 376 FK 377
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
I + ++C + + + +Q+R YRS EVL+ YD + D+WS+ C+ E+ TG+ LF
Sbjct: 202 IVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF--- 258
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF------------TKKGE------ 155
+ + D + I+E+LG P I+ ++ +FF TK G+
Sbjct: 259 ---SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 156 ----LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
L +I G++ + T F + + ML YDPK R LQH +
Sbjct: 316 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375
Query: 212 LQ 213
+
Sbjct: 376 FK 377
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 54 IGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH 113
I + ++C + + + +Q+R YRS EVL+ YD + D+WS+ C+ E+ TG+ LF
Sbjct: 183 IVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF--- 239
Query: 114 AGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF------------TKKGE------ 155
+ + D + I+E+LG P I+ ++ +FF TK G+
Sbjct: 240 ---SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 296
Query: 156 ----LRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
L +I G++ + T F + + ML YDPK R LQH +
Sbjct: 297 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 356
Query: 212 LQ 213
+
Sbjct: 357 FK 358
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 8 FVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQ---TRQYRSLPPFLFDIGTYRNACWVD 64
F+ L TD K N +V +TE R R+L + + +A + D
Sbjct: 133 FLHSNKLTHTDLKPE----NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 65 KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
+H + V TR YR+ EV++ G+ D+WS+ C+ E G +F H ++H
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS------KEH 242
Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
LA + +LG +PK +IQ + F + + WD +S + + +
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLD---------WDEHS---SAGRYVSRACKP 290
Query: 185 FSEFL--------------RPMLAYDPKLRATAADCLQHPW 211
EF+ + ML YDP R T + L+HP+
Sbjct: 291 LKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R A D V TR YR+ EV++N Y + DIWSV C+ E+ TG L
Sbjct: 169 ILDFGLARQA---DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 225
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F+ G + D L I+++ G P +Q +S E K ++ +P L+ D S
Sbjct: 226 FK---GSDHL---DQLKEIMKVTGTPPAEFVQR-LQSDE---AKNYMKGLPELEKKDFAS 275
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+L N +P + L ML D + R TA + L HP+ ++
Sbjct: 276 ILT---NASPLAV----NLLEKMLVLDAEQRVTAGEALAHPYFES 313
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 8 FVAFGSLEETDKKRRLYIRNACWVDKHFTEDVQ---TRQYRSLPPFLFDIGTYRNACWVD 64
F+ L TD K N +V +TE R R+L + + +A + D
Sbjct: 133 FLHSNKLTHTDLKPE----NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 65 KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
+H + V R YR+ EV++ G+ D+WS+ C+ E G +F H ++H
Sbjct: 189 EHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS------KEH 242
Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
LA + +LG +PK +IQ + F + + WD +S + + +
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLD---------WDEHS---SAGRYVSRACKP 290
Query: 185 FSEFL--------------RPMLAYDPKLRATAADCLQHPW 211
EF+ + ML YDP R T + L+HP+
Sbjct: 291 LKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R AC + T V TR YR+ EV++ GY + DIWSV C+ EL G +F
Sbjct: 167 ILDFGLARTAC-TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSV 170
+ T D +IE LG + + + + + PG+K +L+
Sbjct: 226 QG------TDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRP--KYPGIKFEELFPD 277
Query: 171 LV-----EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ E+ AR + L ML DP R + + L+HP++
Sbjct: 278 WIFPSESERDKIKTSQAR---DLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
L+ E AR + L ML DP R + D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 168 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 227 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 279
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 280 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 168 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 227 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 279
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 280 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 160 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 219 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 271
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 272 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 205 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 264 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 316
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 317 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 166 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 224
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 225 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 277
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 278 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 161 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 220 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 272
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 273 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 278
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
L+ E AR + L ML DP R + D LQHP++
Sbjct: 279 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 160 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 219 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 271
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 272 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 161 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 220 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 272
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
L+ E AR + L ML DP R + D LQHP++
Sbjct: 273 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 205 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 111 EPHAGDTYTRDEDHLAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWD 166
G Y D +IE LG + K++ + E K L P L P
Sbjct: 264 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-FPKLFPDS 316
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
L+ E AR + L ML DP R + D LQHP++
Sbjct: 317 LFPADSEHNKLKASQAR---DLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+A D T V TR YR+ EV+++ Y+ + DIWSV C+ E+ TG L
Sbjct: 167 ILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 223
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F+ G Y D L I+++ G +Q + + K ++ +P D
Sbjct: 224 FK---GKDYL---DQLTQILKVTGVPGTEFVQKLNDKA----AKSYIQSLPQTPRKDFTQ 273
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ P ++ ++ L ML D R TAA L HP+ +
Sbjct: 274 LF-------PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
L D G R F+ +V T YR+ +VL+ + Y S DIWS C+ E+ TG L
Sbjct: 149 LGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL 208
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T DE+ L I +++G + + S + ++ +I P DL
Sbjct: 209 FPG------TNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP------NIQQRPPRDLRQ 256
Query: 170 VLVEKYNWTPESARG-FSEFLRPMLAYDPKLRATAADCLQHPW 211
VL T E G +FL +L +P +R +A L HPW
Sbjct: 257 VLQPH---TKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+A D T V TR YR+ EV+++ Y+ + DIWSV C+ E+ TG L
Sbjct: 185 ILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 241
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F+ G Y D L I+++ G +Q + + K ++ +P D
Sbjct: 242 FK---GKDYL---DQLTQILKVTGVPGTEFVQKLNDKA----AKSYIQSLPQTPRKDFTQ 291
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ P ++ ++ L ML D R TAA L HP+ +
Sbjct: 292 LF-------PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 257
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I +K + L K W P+
Sbjct: 258 NHILGILGS----------------PSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPK 301
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
S + L ML ++P R T + L HP+L+
Sbjct: 302 SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ +VL+ + Y S DIWS+ C+ E+ TG L
Sbjct: 160 LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F G T D+D L I +LG R E + L W +
Sbjct: 220 F---PGVT---DDDQLPKIFSILGTPNPR----------------EWPQVQELPLWKQRT 257
Query: 170 VLV-EKYNWT---PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
V EK W+ P + + L ML +DP R +A D + HP+ ++
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ +VL+ + Y S DIWS+ C+ E+ TG L
Sbjct: 160 LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F G T D+D L I +LG R E + L W +
Sbjct: 220 F---PGVT---DDDQLPKIFSILGTPNPR----------------EWPQVQELPLWKQRT 257
Query: 170 VLV-EKYNWT---PESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
V EK W+ P + + L ML +DP R +A D + HP+ ++
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R A D+ T V TR YR+ E+++N Y+ + DIWSV C+ EL G L
Sbjct: 164 ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F G Y D L I+E++G ++ SSE + ++ +P + DL S
Sbjct: 221 F---PGSDYI---DQLKRIMEVVGTPSPEVL--AKISSEH--ARTYIQSLPPMPQKDLSS 270
Query: 170 VLVEKYNWTPESARGFS----EFLRPMLAYDPKLRATAADCLQHPW 211
+ RG + + L ML D R +AA+ L H +
Sbjct: 271 IF-----------RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 305
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R A D+ T V TR YR+ E+++N Y+ + DIWSV C+ EL G L
Sbjct: 172 ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F G Y D L I+E++G ++ SSE + ++ +P + DL S
Sbjct: 229 F---PGSDYI---DQLKRIMEVVGTPSPEVL--AKISSEH--ARTYIQSLPPMPQKDLSS 278
Query: 170 VLVEKYNWTPESARGFS----EFLRPMLAYDPKLRATAADCLQHPW 211
+ RG + + L ML D R +AA+ L H +
Sbjct: 279 IF-----------RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R A D+ T V TR YR+ E+++N Y+ + DIWSV C+ EL G L
Sbjct: 172 ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F G Y D L I+E++G ++ SSE + ++ +P + DL S
Sbjct: 229 F---PGSDYI---DQLKRIMEVVGTPSPEVL--AKISSEH--ARTYIQSLPPMPQKDLSS 278
Query: 170 VLVEKYNWTPESARGFS----EFLRPMLAYDPKLRATAADCLQHPW 211
+ RG + + L ML D R +AA+ L H +
Sbjct: 279 IF-----------RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 195 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTL 251
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQ--SGHRSSEFFTKKGELRHIPGLKPWDL 167
F T + L I+ L G P +I H + + + +P + +
Sbjct: 252 FPG------TDHINQLQQIMRLTGTPPASVISRMPSHEARNY------INSLPQMPKRNF 299
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TA++ L HP+
Sbjct: 300 ADVFI---GANPLAV----DLLEKMLVLDTDKRITASEALAHPY 336
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 239
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIP--GLKPWDLYSVLVEKYNWTPESAR 183
HI+ +LG + + G + L +P PW+ P +
Sbjct: 240 NHILGILGSPSQEDLNCGIN----LKARNYLLSLPHKNKVPWN---------RLFPNADS 286
Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ L ML ++P R L HP+L
Sbjct: 287 KALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 29/173 (16%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A + T V TR YR+ EV++ GY + DIWSV C+ EL G +F
Sbjct: 165 ILDFGLARTAS-TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 223
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF-----TKKGELRHIPGLKPW 165
+ T D +IE Q G S+EF T + + + P P
Sbjct: 224 QG------TDHIDQWNKVIE----------QLGTPSAEFMAALQPTVRNYVENRPAY-PG 266
Query: 166 DLYSVLVEKYNWTPESARG------FSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ L + + ES R + L ML DP R + + L+HP++
Sbjct: 267 IAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 238 NHILGILGS----------------PSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 238 NHILGILGS----------------PSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 235
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG ++ +L I LK + L K W P
Sbjct: 236 NHILGILGS----------------PEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 279
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 280 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 239
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 240 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 283
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 284 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 238 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 242
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 243 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 286
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 287 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 243
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 244 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 287
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 288 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 234
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 235 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 278
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 279 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 238 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 257
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 258 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 301
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 302 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 235
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 236 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 279
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 280 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 257
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 258 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 301
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 302 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 245
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 246 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 289
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 290 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 237
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 238 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 281
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 282 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T +V TR YR+ EV++ GY + DIWSV C+ E+ G LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
T D +IE LG P+ + +Q R+ K L P L
Sbjct: 226 ------PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNALKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
TE V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 239
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 240 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 283
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ + L ML ++P R L HP+L
Sbjct: 284 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++NA Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 19/165 (11%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
L D G R + ++ +V T YR +VL A Y S D+WS C+ ELA
Sbjct: 142 LADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
P D +D L I LLG + S + +P KP+ +Y
Sbjct: 202 LFP-GNDV----DDQLKRIFRLLGTPTEEQWPS-------------MTKLPDYKPYPMYP 243
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
N P+ + L+ +L +P R +A + LQHP+ +
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
E V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 241
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 242 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 285
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 286 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 28/153 (18%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
E V TR YR+ E+++N+ GY S DIWSV C+ E+ + +F G Y D L
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYL---DQL 242
Query: 126 AHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYN--WT---PE 180
HI+ +LG + +L I LK + L K W P
Sbjct: 243 NHILGILGS----------------PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 286
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ + L ML ++P R L HP+L+
Sbjct: 287 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 73 TRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIEL 131
+R YR+ E+++ A Y S D+WS+ C+ EL G LF +G+T D L II++
Sbjct: 204 SRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF---SGETSI---DQLVRIIQI 257
Query: 132 LGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRP 191
+G K + R + +T E+R P LK D +L E TP A + L
Sbjct: 258 MGTPTK---EQMIRMNPHYT---EVR-FPTLKAKDWRKILPE---GTPSLA---IDLLEQ 304
Query: 192 MLAYDPKLRATAADCLQHPW 211
+L Y+P LR + + HP+
Sbjct: 305 ILRYEPDLRINPYEAMAHPF 324
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 67 FTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELAT-GDYLFEPHAGDTYTRDEDH 124
++ +V T YR +VL A Y S D+WS C+ ELA G LF + D D
Sbjct: 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD------DQ 211
Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
L I LLG + S + +P KP+ +Y N P+
Sbjct: 212 LKRIFRLLGTPTEEQWPS-------------MTKLPDYKPYPMYPATTSLVNVVPKLNAT 258
Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ L+ +L +P R +A + LQHP+ +
Sbjct: 259 GRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ G LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
T D +IE LG ++ + + + K L P L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ G LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
T D +IE LG ++ + + + K L P L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ G LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
T D +IE LG ++ + + + K L P L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ G LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
T D +IE LG ++ + + + K L P L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ G LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
T D +IE LG ++ + + + K L P L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ G LF
Sbjct: 167 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
T D +IE LG P+ + +Q R+ K L P L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV C+ E+ G LF
Sbjct: 168 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
T D +IE LG P+ + +Q R+ K L P L
Sbjct: 227 PG------TDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 280
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 281 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 323
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 162 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 268
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 269 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 164 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 221 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 270
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 271 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 305
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 162 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 268
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 269 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 162 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 268
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 269 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 177 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 234 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 283
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 284 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 318
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 178 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 284
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 285 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 178 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 284
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 285 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 178 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 284
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 285 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 172 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 278
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 279 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 177 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 234 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 283
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 284 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 318
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 172 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 278
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 279 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 171 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 277
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 278 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 163 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 220 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 269
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 270 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 304
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 176 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 232
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 233 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 282
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 283 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 317
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 168 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 274
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 275 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 185 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 242 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 291
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 292 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 326
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 185 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 242 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 291
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 292 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 326
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 186 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 243 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 292
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 293 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 168 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 274
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 275 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 189 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 246 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 295
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 296 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 330
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 171 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 277
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 278 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 163 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 220 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 269
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 270 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 304
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 172 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 278
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 279 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYL 109
L D G R + + ++V TR YR+ E+L+ + Y + D+W++ C+ E+ G+ L
Sbjct: 165 LCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGD-IPKRIIQSGHRSSEFFTKKGELRHI--PGLKPWD 166
F GD+ D D L HI+ LG+ IP R E F K + P +K +
Sbjct: 225 F---PGDS---DIDQLYHIMMCLGNLIP--------RHQELFNKNPVFAGVRLPEIKERE 270
Query: 167 LYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
L +Y P+ + + + L DP R A+ L H + Q
Sbjct: 271 ---PLERRY---PKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 168 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 274
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 275 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 171 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 277
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 278 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 151 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 210
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 211 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 255
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 256 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 168 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 274
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 275 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 165 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 222 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 271
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 272 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 306
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 186 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 243 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 292
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 293 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 171 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 277
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 278 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 172 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 278
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 279 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 173 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 279
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 280 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 148 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 208 F---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK--------PSFPKWARQD 252
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 253 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 151 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 210
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 211 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 255
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 256 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 145 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + +T +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDAGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
L D G+ + + + + + +R YR+ E++ A Y + DIWS C+ EL G L
Sbjct: 183 LIDFGSAKILIAGEPNVSX-ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL 241
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F +G D L II++LG + I++ + + K P ++P
Sbjct: 242 FPGESGI------DQLVEIIKVLGTPSREQIKT--MNPNYMEHK-----FPQIRPHPFSK 288
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + + +L Y P R TA + L HP+
Sbjct: 289 V------FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDYGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLCRHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 67 FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHL 125
T+ V TR YR+ E+L+ + Y D+WS+ C+ E+ G +F G + + +
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF---PGSSTMNQLERI 243
Query: 126 AHIIELLGDIPKRIIQSGHRSS--EFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESAR 183
+I+ + IQS + E +K E+R + + L+ K N +
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303
Query: 184 GFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ L +L ++P R +A D L+HP++
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 67 FTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH- 124
TE V TR YR+ EV++ +A Y + D+WS C+ EL +F RD H
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQ 231
Query: 125 LAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
L I ++G D R I+S R+ E+ +K +Y + +
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESP-RAREY------------IKSLPMYPAAPLEKMFPRV 278
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ +G + L+ ML +DP R TA + L+HP+LQ
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 12/145 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V TR YR+ EV++ GY + DIWSV C+ E+ G LF T D +IE
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF------PGTDHIDQWNKVIE 241
Query: 131 LLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE 187
LG P+ + +Q R+ K L P L+ E AR +
Sbjct: 242 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR---D 298
Query: 188 FLRPMLAYDPKLRATAADCLQHPWL 212
L ML D R + + LQHP++
Sbjct: 299 LLSKMLVIDASKRISVDEALQHPYI 323
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 186 ILDFGLARHT---DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 243 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 292
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 293 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDGGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDRGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 64 DKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG LF T
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG------TDHI 229
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I+ L+G +++ SSE + + ++ + + + +V + P +
Sbjct: 230 DQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFANVFI---GANPLAV 282
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPW 211
+ L ML D R TAA L H +
Sbjct: 283 ----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 64 DKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
D T V TR YR+ E+++N Y+ + DIWSV C+ EL TG LF T
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG------TDHI 229
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I+ L+G +++ SSE + + ++ + + + +V + P +
Sbjct: 230 DQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFANVFI---GANPLAV 282
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPW 211
+ L ML D R TAA L H +
Sbjct: 283 ----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 162 ILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 268
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 269 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 173 ILDFGLARHTA---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 279
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 280 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 189 ILDFGLARHT---DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 246 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 295
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 296 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 330
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLAQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 173 ILDFGLARHTA---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 279
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 280 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 67 FTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH- 124
TE V TR YR+ EV++ +A Y + D+WS C+ EL +F RD H
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQ 231
Query: 125 LAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
L I ++G D R I+S R+ E+ +K +Y + +
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESP-RAREY------------IKSLPMYPAAPLEKMFPRV 278
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ +G + L+ ML +DP R TA + L+HP+LQ
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ D V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 166 ILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 272
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 273 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYL 109
+ D G R+ T V TR YR+ E+++N Y+ + DIWSV C+ EL TG L
Sbjct: 173 ILDFGLARHTA---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F T D L I+ L+G +++ SSE + + ++ + + + +
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK--ISSE--SARNYIQSLTQMPKMNFAN 279
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
V + P + + L ML D R TAA L H +
Sbjct: 280 VFI---GANPLAV----DLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 146 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 206 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 250
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 251 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 66/166 (39%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A +V TR YR+ EV++ GY + DIWSV C+ E+ LF
Sbjct: 167 ILDFGLARTA-GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
G Y D +IE LG P + +Q R+ K L P L
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 146 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 206 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 250
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 251 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 143 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGR---SLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGR---SLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 145 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 146 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 206 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 250
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 251 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 143 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 203 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 247
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 248 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 148 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 208 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 252
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 253 FSKVVPPLD---EDGR---SLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + D+WSV C+ E+ LF
Sbjct: 172 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 230
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
G Y D +IE LG P+ + +Q R+ K L P L
Sbjct: 231 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 284
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 285 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 327
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 145 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 145 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 145 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 205 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 249
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 250 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 144 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 204 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 248
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 249 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + D+WSV C+ E+ LF
Sbjct: 161 ILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 219
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
G Y D +IE LG P+ + +Q R+ K L P L
Sbjct: 220 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 273
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 274 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 316
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 146 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 206 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 250
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 251 FSKVVPPLD---EDGRSL---LSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSA-DIWSVACMAFELATGDYL 109
L D G R + + +V T YR+ E+L+ Y +A DIWS+ C+ E+ T L
Sbjct: 147 LADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL-- 167
F GD+ + D L I LG P ++ G S + P W
Sbjct: 207 F---PGDS---EIDQLFRIFRTLGT-PDEVVWPGVTSMPDYK--------PSFPKWARQD 251
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+S +V + E R L ML YDP R +A L HP+ Q+
Sbjct: 252 FSKVVPPLD---EDGR---SLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 13/166 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A +V TR YR+ EV++ GY + D+WSV C+ E+ LF
Sbjct: 167 ILDFGLARTA-GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGD-IPK--RIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
G Y D +IE LG P+ + +Q R+ K L P L
Sbjct: 226 ---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV + E+ G LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
T D +IE LG ++ + + + K L P L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 190 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 242
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 295
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 296 L----DFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 243
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 296
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 297 L----DFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 26/169 (15%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYL 109
L D G R ++ ++V TR YRS E+L+ + Y D+W++ C+ EL +G L
Sbjct: 143 LCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPL 202
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGD-IPKRIIQSGHRSSEFFTKKGELRHIPGLK---PW 165
+ + D D L I + LGD IP+ Q ++++F+ G+K P
Sbjct: 203 WPGKS------DVDQLYLIRKTLGDLIPRH--QQVFSTNQYFS---------GVKIPDPE 245
Query: 166 DLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
D+ + + K+ A G L+ L DP R T L HP+ +N
Sbjct: 246 DMEPLEL-KFPNISYPALG---LLKGCLHMDPTERLTCEQLLHHPYFEN 290
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
+ D G R A T V TR YR+ EV++ GY + DIWSV + E+ G LF
Sbjct: 167 ILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
Query: 111 EPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTK---KGELRHIPGLKPWDL 167
T D +IE LG ++ + + + K L P L
Sbjct: 226 PG------TDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 279
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ E AR + L ML D R + + LQHP++
Sbjct: 280 FPADSEHNKLKASQAR---DLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 243
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 296
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 297 L----DFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 197 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 249
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 250 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 302
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 303 L----DFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRKEPFFHGHDNY----DQLVR 244
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG I K I+ R ++ + R W+ + ++ +PE+
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR-------WERFVHSENQHLVSPEA 297
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+FL +L YD + R TA + ++HP+
Sbjct: 298 L----DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 22/165 (13%)
Query: 53 DIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGD 107
D G R C TE V TR YR+ E++++ Y + D+WSV C+ E+
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
Query: 108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
LF G Y L I+ +LG +IQ+ + ++ +P +P
Sbjct: 261 QLF---PGKNYVH---QLQLIMMVLGTPSPAVIQAVGAER----VRAYIQSLPPRQPVPW 310
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+V P + R L ML ++P R +AA L+HP+L
Sbjct: 311 ETVY-------PGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 22/165 (13%)
Query: 53 DIGTYRNACWVDKH----FTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGD 107
D G R C TE V TR YR+ E++++ Y + D+WSV C+ E+
Sbjct: 202 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
Query: 108 YLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
LF G Y L I+ +LG +IQ+ + ++ +P +P
Sbjct: 262 QLF---PGKNYVH---QLQLIMMVLGTPSPAVIQAVGAER----VRAYIQSLPPRQPVPW 311
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+V P + R L ML ++P R +AA L+HP+L
Sbjct: 312 ETVY-------PGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYL 109
L D G R K + +V T YR ++L+ + Y D+W V C+ +E+ATG L
Sbjct: 141 LADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPL 200
Query: 110 FEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYS 169
F G T E+ L I +LG P G S+E F + + P + L S
Sbjct: 201 F---PGSTV---EEQLHFIFRILG-TPTEETWPGILSNEEF----KTYNYPKYRAEALLS 249
Query: 170 VLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
P ++ L +L ++ + R +A D ++HP+
Sbjct: 250 -------HAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 67 FTEDVQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH- 124
E V TR YR+ EV++ +A Y + D+WS C+ EL +F RD H
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQ 231
Query: 125 LAHIIELLG----DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
L I ++G D R I+S R+ E+ +K +Y + +
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESP-RAREY------------IKSLPMYPAAPLEKMFPRV 278
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ +G + L+ ML +DP R TA + L+HP+LQ
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 67 FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
T V T YR+ EVL+ + Y D+WSV C+ E+ LF G++ + D L
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLG 229
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
I +L+G P+ + +G P P + SV+ PE +
Sbjct: 230 KIFDLIGLPPE-----DDWPRDVSLPRGAF---PPRGPRPVQSVV-------PEMEESGA 274
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ L ML ++P R +A LQH +L
Sbjct: 275 QLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 182 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 235
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 236 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 294
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 295 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 181 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 234
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 235 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 293
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 294 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 181 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 234
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 235 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 293
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 294 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 320
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 180 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 233
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + + +R E + L KPW + ++ +PE+
Sbjct: 234 DQLVKIAKVLGTDGLNVYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 292
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 293 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T YR+ EVL+ + Y D+WSV C+ E+ LF G++ + D L I +
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFD 225
Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
L+G P+ + +G P P + SV+ PE ++ L
Sbjct: 226 LIGLPPE-----DDWPRDVSLPRGAF---PPRGPRPVQSVV-------PEMEESGAQLLL 270
Query: 191 PMLAYDPKLRATAADCLQHPWLQN 214
ML ++P R +A LQH +L
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T YR+ EVL+ + Y D+WSV C+ E+ LF G++ + D L I +
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFD 225
Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
L+G P+ + +G P P + SV+ PE ++ L
Sbjct: 226 LIGLPPE-----DDWPRDVSLPRGAF---PPRGPRPVQSVV-------PEMEESGAQLLL 270
Query: 191 PMLAYDPKLRATAADCLQHPWLQN 214
ML ++P R +A LQH +L
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T YR+ EVL+ + Y D+WSV C+ E+ LF G++ + D L I +
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF---CGNS---EADQLGKIFD 225
Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
L+G P+ + +G P P + SV+ PE ++ L
Sbjct: 226 LIGLPPE-----DDWPRDVSLPRGAF---PPRGPRPVQSVV-------PEMEESGAQLLL 270
Query: 191 PMLAYDPKLRATAADCLQHPWLQN 214
ML ++P R +A LQH +L
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 66/167 (39%), Gaps = 30/167 (17%)
Query: 53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFE 111
D G R + +T +V T YR+ +VL+ + Y + DIWSV C+ E+ G LF
Sbjct: 143 DFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF- 201
Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
P + D L I +LG + ++ L +D +
Sbjct: 202 PGVSEA-----DQLMRIFRILGTPNSK----------------NWPNVTELPKYDPNFTV 240
Query: 172 VEKYNWTPES-ARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
E W ES +G E L ML DP R TA L+H + +
Sbjct: 241 YEPLPW--ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 65/167 (38%), Gaps = 30/167 (17%)
Query: 53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFE 111
D G R + +T +V T YR+ +VL+ + Y + DIWSV C+ E+ G LF
Sbjct: 143 DFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFP 202
Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
+ D L I +LG + ++ L +D +
Sbjct: 203 G------VSEADQLMRIFRILGTPNSK----------------NWPNVTELPKYDPNFTV 240
Query: 172 VEKYNWTPES-ARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
E W ES +G E L ML DP R TA L+H + +
Sbjct: 241 YEPLPW--ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 37/188 (19%)
Query: 52 FDIGTYRNACWVDKHFTEDVQTRQYRSLE-VLINAGYDCSADIWSVACMAFELAT----- 105
++ T+ + + + T V TR YR+ E +L+ Y + D+WS+ C+ EL
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284
Query: 106 ------------GDYLF----EPHAGDTY---TR-DEDHLAHIIELLGDIPKRIIQSGHR 145
G F + AG+ + TR + D L I +LG + I++ +
Sbjct: 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEK 344
Query: 146 SSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAAD 205
K +R P + DL E++ P S+ L+ ML ++P R T +
Sbjct: 345 ED----AKRYIRIFPKREGTDL----AERF---PASSADAIHLLKRMLVFNPNKRITINE 393
Query: 206 CLQHPWLQ 213
CL HP+ +
Sbjct: 394 CLAHPFFK 401
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 30/167 (17%)
Query: 53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFELATGDYLFE 111
D G R + +T ++ T YR+ +VL+ + Y + DIWSV C+ E+ G LF
Sbjct: 143 DFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF- 201
Query: 112 PHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL 171
P + D L I +LG + ++ L +D +
Sbjct: 202 PGVSEA-----DQLMRIFRILGTPNSK----------------NWPNVTELPKYDPNFTV 240
Query: 172 VEKYNWTPES-ARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
E W ES +G E L ML DP R TA L+H + +
Sbjct: 241 YEPLPW--ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 65 KHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACM-AFELATGDYLFEPHAGDTYTRDE 122
K + V +R ++ E+L++ YD S D+WS+ CM A + + F H +
Sbjct: 201 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NH 254
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
D L I ++LG + +R E + L KPW + ++ +PE+
Sbjct: 255 DQLVKIAKVLGTDGLNAYLNKYRI-ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAI 313
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+FL +L YD + R TA + + HP+ Q
Sbjct: 314 ----DFLDKLLRYDHQERLTALEAMTHPYFQ 340
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 25/146 (17%)
Query: 71 VQTRQYRSLEVLI-NAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
+ +R YR+ E++ N Y + DIWSV C+ E+ G+ +F GD L I+
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR---GDN---SAGQLHEIV 245
Query: 130 ELLGDIPKRIIQS---GHRSSEFFTKKGELRHIPGLKPW-DLYSVLVEKYNWTPESARGF 185
+LG + +++ H + + KG PW +++S + + + A+
Sbjct: 246 RVLGCPSREVLRKLNPSHTDVDLYNSKG--------IPWSNVFS------DHSLKDAKEA 291
Query: 186 SEFLRPMLAYDPKLRATAADCLQHPW 211
+ L +L Y P+ R + L HP+
Sbjct: 292 YDLLSALLQYLPEERMKPYEALCHPY 317
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 43/159 (27%)
Query: 67 FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
T V T YR+ EVL+ + Y D+WSV C+ E+ LF + D D L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLG 229
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
I++++G +PG + W V + + + +SA+
Sbjct: 230 KILDVIG-------------------------LPGEEDWP-RDVALPRQAFHSKSAQPIE 263
Query: 187 EFLRPM-----------LAYDPKLRATAADCLQHPWLQN 214
+F+ + L ++P R +A L HP+ Q+
Sbjct: 264 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 43/159 (27%)
Query: 67 FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
T V T YR+ EVL+ + Y D+WSV C+ E+ LF + D D L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLG 229
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
I++++G +PG + W V + + + +SA+
Sbjct: 230 KILDVIG-------------------------LPGEEDWP-RDVALPRQAFHSKSAQPIE 263
Query: 187 EFLRPM-----------LAYDPKLRATAADCLQHPWLQN 214
+F+ + L ++P R +A L HP+ Q+
Sbjct: 264 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 43/158 (27%)
Query: 67 FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLA 126
T V T YR+ EVL+ + Y D+WSV C+ E+ LF + D D L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLG 229
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFS 186
I++++G +PG + W V + + + +SA+
Sbjct: 230 KILDVIG-------------------------LPGEEDWP-RDVALPRQAFHSKSAQPIE 263
Query: 187 EFLRPM-----------LAYDPKLRATAADCLQHPWLQ 213
+F+ + L ++P R +A L HP+ Q
Sbjct: 264 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 50 FLFDIGTYRNACWVDKHFT------EDVQTRQYRSLEVLINAG-YDCSADIWSVACMAFE 102
+ IG + A +D H++ E + T+ YRS +L++ Y + D+W+ C+ E
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 217
Query: 103 LATGDYLFEPHAGDTYTRDEDHLAHIIE----LLGDIPKRIIQSGHRSSEFFTKKGELRH 158
+ TG LF AG AH +E +L IP ++ R L
Sbjct: 218 MLTGKTLF---AG----------AHELEQMQLILESIP--VVHEEDRQEL-------LSV 255
Query: 159 IPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
IP D+ P +R +FL +L + P R TA + L HP++
Sbjct: 256 IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ +R ML + P LR TA CL+HPW+Q
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73 TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
T Y + EVL++ AGY+ + D WS+ + F +G F H +D+
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 231
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
I SG KYN+ PE SE
Sbjct: 232 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 251
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
++ +L DPK R T + L+HPWLQ+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73 TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
T Y + EVL++ AGY+ + D WS+ + F +G F H +D+
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 231
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
I SG KYN+ PE SE
Sbjct: 232 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 251
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
++ +L DPK R T + L+HPWLQ+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73 TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
T Y + EVL++ AGY+ + D WS+ + F +G F H +D+
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 230
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
I SG KYN+ PE SE
Sbjct: 231 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 250
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
++ +L DPK R T + L+HPWLQ+
Sbjct: 251 LDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73 TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
T Y + EVL++ AGY+ + D WS+ + F +G F H +D+
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 370
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
I SG KYN+ PE SE
Sbjct: 371 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 390
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
++ +L DPK R T + L+HPWLQ+
Sbjct: 391 LDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73 TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
T Y + EVL++ AGY+ + D WS+ + F +G F H +D+
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 356
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
I SG KYN+ PE SE
Sbjct: 357 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 376
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
++ +L DPK R T + L+HPWLQ+
Sbjct: 377 LDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73 TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
T Y + EVL++ AGY+ + D WS+ + F +G F H +D+
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 231
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
I SG KYN+ PE SE
Sbjct: 232 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 251
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
++ +L DPK R T + L+HPWLQ+
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 54/149 (36%)
Query: 73 TRQYRSLEVLIN---AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHII 129
T Y + EVL++ AGY+ + D WS+ + F +G F H +D+
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ------- 237
Query: 130 ELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSE-- 187
I SG KYN+ PE SE
Sbjct: 238 ----------ITSG------------------------------KYNFIPEVWAEVSEKA 257
Query: 188 --FLRPMLAYDPKLRATAADCLQHPWLQN 214
++ +L DPK R T + L+HPWLQ+
Sbjct: 258 LDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFE 111
D G R + FT ++ T YR E+L+ + Y S DIWS+AC+ E+ LF
Sbjct: 180 DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF- 238
Query: 112 PHAGDTYTRDEDHLAHIIELLG 133
GD+ + D L I E+LG
Sbjct: 239 --PGDS---EIDQLFKIFEVLG 255
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ +R ML + P LR TA CL+HPW+Q
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ +R ML + P LR TA CL+HPW+Q
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 41/140 (29%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
T + + EVL GYD + DIWS+ + + + TG + P A E+ LA I
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG---YTPFANGPDDTPEEILARI---- 235
Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
S +F G +N ++A+ + + M
Sbjct: 236 ------------GSGKFSLSGG-------------------YWNSVSDTAK---DLVSKM 261
Query: 193 LAYDPKLRATAADCLQHPWL 212
L DP R TAA L+HPW+
Sbjct: 262 LHVDPHQRLTAALVLRHPWI 281
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 27/151 (17%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 198 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRREPFFHGQDNY----DQLVR 250
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG + K I ++ + R W+ + ++ +PE+
Sbjct: 251 IAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKR-------WENFIHSENRHLVSPEA 303
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ L +L YD + R TA + ++HP+
Sbjct: 304 L----DLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 71 VQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEP--HAGDTYTRDEDHLAH 127
V +R ++ E+L++ YD S D+WS+ CM LA+ + EP H D Y D L
Sbjct: 193 VASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMIFRREPFFHGQDNY----DQLVR 245
Query: 128 IIELLGD------IPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPES 181
I ++LG + K I ++ + R W+ + ++ +PE+
Sbjct: 246 IAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKR-------WENFIHSENRHLVSPEA 298
Query: 182 ARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
+ L +L YD + R TA + ++HP+
Sbjct: 299 L----DLLDKLLRYDHQQRLTAKEAMEHPY 324
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 50/140 (35%), Gaps = 41/140 (29%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
T + + EVL GYD DIWS+ + + + G + P A E+ L I
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG---YTPFANGPSDTPEEILTRI---- 240
Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
S FT G +N E+A+ + + M
Sbjct: 241 -------------GSGKFTLSGG------------------NWNTVSETAK---DLVSKM 266
Query: 193 LAYDPKLRATAADCLQHPWL 212
L DP R TA LQHPW+
Sbjct: 267 LHVDPHQRLTAKQVLQHPWV 286
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 45/135 (33%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
EV+ GY+C ADIWS+ A E+A G +P D H I ++ P
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEG----KPPYADI------HPMRAIFMIPTNPP-- 242
Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
P + +L+S F++F++ L P+
Sbjct: 243 --------------------PTFRKPELWS-------------DNFTDFVKQCLVKSPEQ 269
Query: 200 RATAADCLQHPWLQN 214
RATA LQHP++++
Sbjct: 270 RATATQLLQHPFVRS 284
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 50/140 (35%), Gaps = 41/140 (29%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
T + + EVL GYD DIWS+ + + + G + P A E+ L I
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG---YTPFANGPSDTPEEILTRI---- 240
Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
S FT G +N E+A+ + + M
Sbjct: 241 -------------GSGKFTLSGG------------------NWNTVSETAK---DLVSKM 266
Query: 193 LAYDPKLRATAADCLQHPWL 212
L DP R TA LQHPW+
Sbjct: 267 LHVDPHQRLTAKQVLQHPWV 286
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 71 VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD---EDHLA 126
V T YR+ E+L+ A Y + DIW++ C+ EL T + +F D T + D L
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255
Query: 127 HIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVL--VEKYNWTPESARG 184
I ++G + + + E T + R + S++ +EK+ P+S +
Sbjct: 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRR----NTYTNCSLIKYMEKHKVKPDS-KA 310
Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPW 211
F L+ +L DP R T+ +Q P+
Sbjct: 311 F-HLLQKLLTMDPIKRITSEQAMQDPY 336
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA--GYDCSADIWSVACMAFELATGDY 108
+ D GT + ++ T QY + E++ GY +ADIWS+ C E+ATG
Sbjct: 164 ISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
Query: 109 LF----EPHA 114
F EP A
Sbjct: 224 PFYELGEPQA 233
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRD 121
+D V TR Y S E L Y +DIWS+ E+A G Y P +R
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP 214
Query: 122 EDHLAHIIELLGDIPKRIIQSGHRSSEF 149
+ +++ + + P + SG S EF
Sbjct: 215 PMAIFELLDYIVNEPPPKLPSGVFSLEF 242
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA--GYDCSADIWSVACMAFELATGDYLF 110
D GT + ++ T QY + E++ GY +ADIWS+ C E+ATG F
Sbjct: 152 DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
Query: 111 ----EPHA 114
EP A
Sbjct: 212 YELGEPQA 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQ 213
+F+R +L DPK R T D LQHPW++
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 47/133 (35%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
EV+ + YD ADIWS+ A ELA G EP D + P R+
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKG----EPPNSDLH-----------------PMRV 224
Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
+ F K + G + ++ F EF+ L DP+
Sbjct: 225 L--------FLIPKNSPPTLEG------------------QHSKPFKEFVEACLNKDPRF 258
Query: 200 RATAADCLQHPWL 212
R TA + L+H ++
Sbjct: 259 RPTAKELLKHKFI 271
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 47/133 (35%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
EV+ + YD ADIWS+ A ELA G EP D + P R+
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKG----EPPNSDMH-----------------PMRV 228
Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
L IP P L + + F EF+ L DP
Sbjct: 229 ----------------LFLIPKNNPPTLVG----------DFTKSFKEFIDACLNKDPSF 262
Query: 200 RATAADCLQHPWL 212
R TA + L+H ++
Sbjct: 263 RPTAKELLKHKFI 275
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 53/154 (34%), Gaps = 51/154 (33%)
Query: 61 CWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTR 120
CW+ E V+ GYD ADIWS A ELATG Y +
Sbjct: 186 CWMAPEVMEQVR-------------GYDFKADIWSFGITAIELATG--------AAPYHK 224
Query: 121 DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
++ L D P +++G + E K G
Sbjct: 225 YPPMKVLMLTLQNDPPS--LETGVQDKEMLKKYG-------------------------- 256
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ F + + L DP+ R TAA+ L+H + Q
Sbjct: 257 --KSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 53/154 (34%), Gaps = 51/154 (33%)
Query: 61 CWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTR 120
CW+ E V+ GYD ADIWS A ELATG Y +
Sbjct: 191 CWMAPEVMEQVR-------------GYDFKADIWSFGITAIELATG--------AAPYHK 229
Query: 121 DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
++ L D P +++G + E K G
Sbjct: 230 YPPMKVLMLTLQNDPPS--LETGVQDKEMLKKYG-------------------------- 261
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ F + + L DP+ R TAA+ L+H + Q
Sbjct: 262 --KSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 64 DKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
D + T V R YR+ E+++ G+ D+WS C+ E+ LF G T+
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR---GSTFY--- 240
Query: 123 DHLAHIIELLG--DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
+ L I+E++G I ++ S + ++ + L ++P + W P
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYL--RNSLSNVPA-RAWTAV---------VPT 288
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ + + ML ++P+ R + L+HP+ ++
Sbjct: 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 64 DKHFTEDVQTRQYRSLEVLIN-AGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
D + T V R YR+ E+++ G+ D+WS C+ E+ LF G T+
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR---GSTFY--- 240
Query: 123 DHLAHIIELLG--DIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPE 180
+ L I+E++G I ++ S + ++ + L ++P + W P
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYL--RNSLSNVPA-RAWTAV---------VPT 288
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ + + ML ++P+ R + L+HP+ ++
Sbjct: 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYL 109
L D G ++ ++ + V TR YR+ E+L A Y D+W+V C+ EL
Sbjct: 153 LADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVP 211
Query: 110 FEPHAGDTYTRDEDHLAHIIELLG 133
F P GD+ D D L I E LG
Sbjct: 212 FLP--GDS---DLDQLTRIFETLG 230
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 63 VDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA 114
+D+ E V TR Y S E L Y +DIWS+ E+A G Y P A
Sbjct: 159 IDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMA 210
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 41/140 (29%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
T + + EVL GYD + DIWS+ + + TG + P A E+ LA I
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG---YTPFANGPDDTPEEILARI---- 235
Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPM 192
S +F G +N ++A+ + +
Sbjct: 236 ------------GSGKFSLSGG-------------------YWNSVSDTAK---DLVSKX 261
Query: 193 LAYDPKLRATAADCLQHPWL 212
L DP R TAA L+HPW+
Sbjct: 262 LHVDPHQRLTAALVLRHPWI 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 45/150 (30%)
Query: 65 KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
K + + T Y + EVL + YD D+WS + + L +G F + + Y
Sbjct: 189 KKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF--NGANEY------ 239
Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARG 184
DI K++ +KG+ Y+ + ++ ESA+
Sbjct: 240 ---------DILKKV------------EKGK------------YTFELPQWKKVSESAK- 265
Query: 185 FSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ +R ML Y P +R +A D L H W+Q
Sbjct: 266 --DLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
Y+ + ++ ESA+ + +R ML Y P +R +A D L H W+Q
Sbjct: 268 YTFELPQWKKVSESAK---DLIRKMLTYVPSMRISARDALDHEWIQT 311
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
Y+ + ++ ESA+ + +R ML Y P +R +A D L H W+Q
Sbjct: 267 YTFELPQWKKVSESAK---DLIRKMLTYVPSMRISARDALDHEWIQT 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
Y+ + ++ ESA+ + +R ML Y P +R +A D L H W+Q
Sbjct: 244 YTFELPQWKKVSESAK---DLIRKMLTYVPSMRISARDALDHEWIQT 287
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 45/133 (33%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRI 139
EV+ + Y DIWS+ M E+ G+ P+ D+ + ++ L D P
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGE---PPYFSDSPVQ-------AMKRLRDSPPPK 260
Query: 140 IQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKL 199
+++ H+ S P L+ +FL ML DP+
Sbjct: 261 LKNSHKVS------------PVLR-----------------------DFLERMLVRDPQE 285
Query: 200 RATAADCLQHPWL 212
RATA + L HP+L
Sbjct: 286 RATAQELLDHPFL 298
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTRDEDHLAHIIEL 131
T Y + EVL G+ D+WS+ C+ + L G FE +TY R + + I +
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 243
Query: 132 LGDIPKRIIQ 141
+ + +IQ
Sbjct: 244 INPVAASLIQ 253
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTRDEDHLAHIIEL 131
T Y + EVL G+ D+WS+ C+ + L G FE +TY R + + I +
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 261
Query: 132 LGDIPKRIIQ 141
+ + +IQ
Sbjct: 262 INPVAASLIQ 271
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTRDEDHLAHIIEL 131
T Y + EVL G+ D+WS+ C+ + L G FE +TY R + + I +
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 263
Query: 132 LGDIPKRIIQ 141
+ + +IQ
Sbjct: 264 INPVAASLIQ 273
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTRDEDHLAHIIEL 131
T Y + EVL G+ D+WS+ C+ + L G FE +TY R + + I +
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 239
Query: 132 LGDIPKRIIQ 141
+ + +IQ
Sbjct: 240 INPVAASLIQ 249
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTRDEDHLAHIIEL 131
T Y + EVL G+ D+WS+ C+ + L G FE +TY R + + I +
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 239
Query: 132 LGDIPKRIIQ 141
+ + +IQ
Sbjct: 240 INPVAASLIQ 249
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
+D V TR Y S E L Y +DIWS+ E+A G Y P
Sbjct: 217 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTRDEDHLAHIIEL 131
T Y + EVL G+ D+WS+ C+ + L G FE +TY R + + I +
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 237
Query: 132 LGDIPKRIIQ 141
+ + +IQ
Sbjct: 238 INPVAASLIQ 247
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHA 114
EV+ + YD ADIWS+ A ELA G+ PH+
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGE---PPHS 205
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHA 114
EV+ + YD ADIWS+ A ELA G+ PH+
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGE---PPHS 205
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHA 114
EV+ + YD ADIWS+ A ELA G+ PH+
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGE---PPHS 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATGDYLFEPHA 114
EV+ + YD ADIWS+ A ELA G+ PH+
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGE---PPHS 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
+D V TR Y S E L Y +DIWS+ E+A G Y P
Sbjct: 182 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
+D V TR Y S E L Y +DIWS+ E+A G Y P
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
+D V TR Y S E L Y +DIWS+ E+A G Y P
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
+D V TR Y + E L Y +DIWS+ ELA G Y P
Sbjct: 165 LIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
+D V TR Y S E L Y +DIWS+ E+A G Y P
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
+D V TR Y S E L Y +DIWS+ E+A G Y P
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 248
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 249 LEYDFPEK 256
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 53/153 (34%)
Query: 65 KHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDH 124
K E + T Y + EVL YD D+WS+ + F L G + P G T D++
Sbjct: 193 KKMKERLGTAYYIAPEVL-RKKYDEKCDVWSIGVILFILLAG---YPPFGGQT---DQEI 245
Query: 125 LAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNW-TPE--- 180
L R ++ G KY + +PE
Sbjct: 246 L------------RKVEKG------------------------------KYTFDSPEWKN 263
Query: 181 SARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
+ G + ++ ML +D + R +A L+HPW++
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 71 VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPH-AGDTYTRDEDHLAHI 128
V T Y + EVL YD SAD +S+ CM F+L G F H D + D L
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 129 IEL 131
+EL
Sbjct: 411 VEL 413
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 71 VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPH-AGDTYTRDEDHLAHI 128
V T Y + EVL YD SAD +S+ CM F+L G F H D + D L
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 129 IEL 131
+EL
Sbjct: 410 VEL 412
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 68 TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH------AGDTYTRD 121
TE V T QY + E+L Y + D WS +AFE TG F P+ G +
Sbjct: 182 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKS 241
Query: 122 EDHLAHIIELLGDI 135
+H+ +L G +
Sbjct: 242 NEHIVVYDDLTGAV 255
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
L D G + A +K T +Y + EV+ G+ SAD WS + FE+ TG F
Sbjct: 171 LTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
Query: 111 E 111
+
Sbjct: 231 Q 231
>pdb|3IZS|MM Chain m, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
pdb|3O58|GG Chain g, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The First 80s In The Asymmetric Unit.
pdb|3O5H|GG Chain g, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The Second 80s In The Asymmetric Unit.
pdb|3U5E|PP Chain p, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome A
pdb|3U5I|PP Chain p, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome B
pdb|4B6A|PP Chain p, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex
With Arx1 And Rei1
Length = 92
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
Query: 74 RQYRSLEVLINAGYDCS-----------ADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
RQ + LE+ +A YDCS A IW+ +C +A G Y A T
Sbjct: 24 RQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTI 83
Query: 123 DHLAHIIE 130
L ++E
Sbjct: 84 RRLREMVE 91
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 68 TEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH------AGDTYTRD 121
TE V T QY + E+L Y + D WS +AFE TG F P+ G +
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKS 240
Query: 122 EDHLAHIIELLGDI 135
+H+ +L G +
Sbjct: 241 NEHIVVYDDLTGAV 254
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTR 120
T Y + EVL G+ DIWS+ C+ + L G FE +TY R
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIR 237
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTR 120
T Y + EVL G+ DIWS+ C+ + L G FE +TY R
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIR 253
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 71 VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPH-AGDTYTRDEDHLAHI 128
V T Y + EVL YD SAD +S+ CM F+L G F H D + D L
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 129 IEL 131
+EL
Sbjct: 411 VEL 413
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 71 VQTRQYRSLEVLINA-GYDCSADIWSVACMAFELATGDYLFEPH-AGDTYTRDEDHLAHI 128
V T Y + EVL YD SAD +S+ CM F+L G F H D + D L
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 129 IEL 131
+EL
Sbjct: 411 VEL 413
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTR 120
T Y + EVL G+ DIWS+ C+ + L G FE +TY R
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIR 253
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTR 120
T Y + EVL G+ DIWS+ C+ + L G FE +TY R
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIR 253
>pdb|1S1I|9 Chain 9, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is
In File 1s1h
Length = 91
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
Query: 74 RQYRSLEVLINAGYDCS-----------ADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
RQ + LE+ +A YDCS A IW+ +C +A G Y A T
Sbjct: 23 RQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTI 82
Query: 123 DHLAHIIE 130
L ++E
Sbjct: 83 RRLREMVE 90
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
E ++ T E A+ +F+R +L DPK R T A L+H W++
Sbjct: 233 EYFSNTSELAK---DFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 25/143 (17%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPH------------------- 113
T Y + E+L GYD S D+WS+ + + + +G F+ H
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 114 ----AGDTYTRDEDHLAHIIE--LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
G+ + +I+ L D KR+ SG R +E+ +L P + P L
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDIL 291
Query: 168 YSVLVEKYNWTPESARGFSEFLR 190
S + + F+++ R
Sbjct: 292 GSSGAAVHTCVKATFHAFNKYKR 314
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
+ T Y S E+ N Y+ +DIW++ C+ +EL T + FE
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 62 WVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAG 115
+D V TR Y S E L Y +DIWS+ E+A G Y +G
Sbjct: 174 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSG 227
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL----IFQKIIK 225
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 226 LEYDFPEK 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL----IFQKIIK 226
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 227 LEYDFPEK 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL----IFQKIIK 224
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 225 LEYDFPEK 232
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
D G + D E T Y + E+L+ Y+ S D WS + +E+ G F
Sbjct: 162 DFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-- 219
Query: 113 HAGDTYTRDEDHLAHIIEL 131
+ +DE+ L H I +
Sbjct: 220 -----HGQDEEELFHSIRM 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL----IFQKIIK 223
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 224 LEYDFPEK 231
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGD 116
V T Y S E + GY+ +DIWS+ C+ +E+A L P GD
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA---LQSPFYGD 239
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 186 SEFLRPMLAYDPKLRATAADCLQHPWLQ 213
++F++ +L +P+ R TA CL H WLQ
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 176 NWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+WT S + ++ ML Y+P R +A + L HPW+
Sbjct: 228 DWTQVSDEA-KQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 45/150 (30%)
Query: 63 VDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDE 122
V E + T Y + EVL YD D+WS + + L G + P G T D+
Sbjct: 176 VGGKMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCG---YPPFGGQT---DQ 228
Query: 123 DHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
+ I KR+ +KG+ P +WT S
Sbjct: 229 E-----------ILKRV------------EKGKFSFDPP--------------DWTQVSD 251
Query: 183 RGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
+ ++ ML Y+P R +A + L HPW+
Sbjct: 252 EA-KQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++I+ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 44/124 (35%)
Query: 89 CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE 148
AD+WS+ + + L +G P GDT ++ LA+I + D E
Sbjct: 197 LEADMWSIGVITYILLSGA---SPFLGDT---KQETLANITAVSYDF----------DEE 240
Query: 149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ 208
FF++ EL +F+R +L + + R T + L+
Sbjct: 241 FFSQTSELA----------------------------KDFIRKLLVKETRKRLTIQEALR 272
Query: 209 HPWL 212
HPW+
Sbjct: 273 HPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 44/124 (35%)
Query: 89 CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE 148
AD+WS+ + + L +G P GDT ++ LA+I + D E
Sbjct: 197 LEADMWSIGVITYILLSGA---SPFLGDT---KQETLANITAVSYDF----------DEE 240
Query: 149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ 208
FF++ EL +F+R +L + + R T + L+
Sbjct: 241 FFSQTSELA----------------------------KDFIRKLLVKETRKRLTIQEALR 272
Query: 209 HPWL 212
HPW+
Sbjct: 273 HPWI 276
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 248
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 249 LEYDFPEK 256
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 253
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 254 LEYDFPEK 261
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 230
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 231 LEYDFPEK 238
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 249
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 250 LEYDFPEK 257
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 246
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 247 LEYDFPEK 254
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 246
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 247 LEYDFPEK 254
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 249
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 250 LEYDFPEK 257
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 246
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 247 LEYDFPEK 254
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 79/204 (38%), Gaps = 60/204 (29%)
Query: 24 YIRNACWVDKHFTE------DV-------QTRQYRSLPPFLFDIGTYRNACWVDKHFTED 70
Y+R AC KH E D+ +T++ S+ F + T N + K T
Sbjct: 154 YMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT-- 211
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
T ++ + E++ D+W++ + + L +G P AG ED L
Sbjct: 212 -ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG---LSPFAG------EDDL----- 256
Query: 131 LLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLR 190
+Q+ R F + D +S + +PE+ +F++
Sbjct: 257 -------ETLQNVKRCDWEFDE-------------DAFSSV------SPEA----KDFIK 286
Query: 191 PMLAYDPKLRATAADCLQHPWLQN 214
+L +P+ R T D L+HPWL+
Sbjct: 287 NLLQKEPRKRLTVHDALEHPWLKG 310
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 246
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 247 LEYDFPEK 254
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 248
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 249 LEYDFPEK 256
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 248
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 249 LEYDFPEK 256
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 245
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 246 LEYDFPEK 253
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 161 GLKPWDLYSVLVEKYNWTPESARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
G K ++ KY P SE +R ML DP R T + L HPWL+
Sbjct: 235 GTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
TPE+ + + ML +P R TAA+ L+HPW+ +
Sbjct: 241 TPEA----KDLINKMLTINPSKRITAAEALKHPWISH 273
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y II+
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI----FQKIIK 245
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 246 LEYDFPEK 253
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 44/122 (36%)
Query: 91 ADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFF 150
AD+WS+ + + L +G P GDT ++ LA+I + D EFF
Sbjct: 199 ADMWSIGVITYILLSGA---SPFLGDT---KQETLANITAVSYDF----------DEEFF 242
Query: 151 TKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHP 210
++ EL +F+R +L + + R T + L+HP
Sbjct: 243 SQTSELA----------------------------KDFIRKLLVKETRKRLTIQEALRHP 274
Query: 211 WL 212
W+
Sbjct: 275 WI 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
TPE+ + + ML +P R TAA+ L+HPW+ +
Sbjct: 252 TPEA----KDLINKMLTINPSKRITAAEALKHPWISH 284
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
V T QY S E+L S+D+W++ C+ ++L G
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 161 GLKPWDLYSVLVEKYNWTPESARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
G K ++ KY P SE +R ML DP R T + L HPWL+
Sbjct: 235 GTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 177 WTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
W E + + +R ++ DPK R T LQHPW+
Sbjct: 274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
L D G + + +K T +Y + EV+ G+ SAD WS + FE+ TG F
Sbjct: 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 111 E 111
+
Sbjct: 227 Q 227
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 161 GLKPWDLYSVLVEKYNWTPESARGFSE----FLRPMLAYDPKLRATAADCLQHPWLQ 213
G K ++ KY P SE +R ML DP R T + L HPWL+
Sbjct: 237 GTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 169 SVLVEKYNWTPESARGFS----EFLRPMLAYDPKLRATAADCLQHPWLQN 214
+++ +Y + E+ + S +F+ +L + K R TA++ LQHPWL+
Sbjct: 214 NIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
L D G + + +K T +Y + EV+ G+ SAD WS + FE+ TG F
Sbjct: 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 111 E 111
+
Sbjct: 227 Q 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 51 LFDIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLF 110
L D G + + +K T +Y + EV+ G+ SAD WS + FE+ TG F
Sbjct: 168 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
Query: 111 E 111
+
Sbjct: 228 Q 228
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 44/124 (35%)
Query: 89 CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE 148
AD+WS+ + + L +G P GDT ++ LA+I + D E
Sbjct: 197 LEADMWSIGVITYILLSGA---SPFLGDT---KQETLANITSVSYDF----------DEE 240
Query: 149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ 208
FF+ EL +F+R +L + + R T + L+
Sbjct: 241 FFSHTSELA----------------------------KDFIRKLLVKETRKRLTIQEALR 272
Query: 209 HPWL 212
HPW+
Sbjct: 273 HPWI 276
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 44 YRSLPP--FLFDIGTYRNACWVDKHFTEDVQTR--------QYRSLEVLINAGYDCSADI 93
YR L P L D Y D F + V+ R +Y + E++++ GY+ + D
Sbjct: 165 YRDLKPENLLIDQQGYIKVA--DFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 94 WSVACMAFELATG 106
W++ + +E+A G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 44/124 (35%)
Query: 89 CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE 148
AD+WS+ + + L +G P GDT ++ LA+I + D E
Sbjct: 197 LEADMWSIGVITYILLSGA---SPFLGDT---KQETLANITSVSYDF----------DEE 240
Query: 149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ 208
FF+ EL +F+R +L + + R T + L+
Sbjct: 241 FFSHTSELA----------------------------KDFIRKLLVKETRKRLTIQEALR 272
Query: 209 HPWL 212
HPW+
Sbjct: 273 HPWI 276
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 44 YRSLPP--FLFDIGTYRNACWVDKHFTEDVQTR--------QYRSLEVLINAGYDCSADI 93
YR L P L D Y D F + V+ R +Y + E++++ GY+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVA--DFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 94 WSVACMAFELATG 106
W++ + +E+A G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 44 YRSLPP--FLFDIGTYRNACWVDKHFTEDVQTR--------QYRSLEVLINAGYDCSADI 93
YR L P L D Y D F + V+ R +Y + E++++ GY+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVA--DFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 94 WSVACMAFELATG 106
W++ + +E+A G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 44 YRSLPP--FLFDIGTYRNACWVDKHFTEDVQTR--------QYRSLEVLINAGYDCSADI 93
YR L P L D Y D F + V+ R +Y + E++++ GY+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVT--DFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDW 221
Query: 94 WSVACMAFELATG 106
W++ + +E+A G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWL 212
+F+R +L DP R T L+HPWL
Sbjct: 283 DFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 44 YRSLPP--FLFDIGTYRNACWVDKHFTEDVQTR--------QYRSLEVLINAGYDCSADI 93
YR L P L D Y D F + V+ R +Y + E++++ GY+ + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVA--DFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 94 WSVACMAFELATG 106
W++ + +E+A G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
E ++ T E A+ +F+R +L DPK R A L+H W++
Sbjct: 254 EYFSNTSELAK---DFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWL 212
+F+R +L DP R T L+HPWL
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 68 TEDVQTRQYRSLEVL----INAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDED 123
T D R Y + E + GYD +D+WS+ +ELATG + + P + D
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY-PKWNSVF----D 237
Query: 124 HLAHIIELLGDIPK 137
L +++ GD P+
Sbjct: 238 QLTQVVK--GDPPQ 249
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 44 YRSLPP--FLFDIGTYRNACWVDKHFTEDVQTR--------QYRSLEVLINAGYDCSADI 93
YR L P L D Y D F + V+ R +Y + E++++ GY+ + D
Sbjct: 185 YRDLKPENLLIDQQGYIQVT--DFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 94 WSVACMAFELATG 106
W++ + +E+A G
Sbjct: 243 WALGVLIYEMAAG 255
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTY 118
V T QY S E+L S+D+W++ C+ ++L G F AG+ Y
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 243
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 173 EKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
E ++ T E A+ +F+R +L DPK R A L+H W++
Sbjct: 240 EYFSNTSELAK---DFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3JYW|9 Chain 9, Structure Of The 60s Proteins For Eukaryotic Ribosome
Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome
At 8.9a Resolution
Length = 72
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
Query: 74 RQYRSLEVLINAGYDCS-----------ADIWSVACMAFELATGDYLFEPHAGDT 117
RQ + LE+ +A YDCS A IW+ +C +A G Y A T
Sbjct: 14 RQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAAT 68
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
T +Y + E+L+ +G++ + D WS+ + +++ TG P G+ + D I++
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA---PPFTGENRKKTID---KILKCK 237
Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY----NWTPESARGFSEF 188
++P + Q + K+ + G P D V + NW AR
Sbjct: 238 LNLPPYLTQEARDLLKKLLKRNAASRL-GAGPGDAGEVQAHPFFRHINWEELLARKVEPP 296
Query: 189 LRPML 193
+P+L
Sbjct: 297 FKPLL 301
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELL 132
T +Y + E+L+ +G++ + D WS+ + +++ TG P G+ + D I++
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA---PPFTGENRKKTID---KILKCK 237
Query: 133 GDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKY----NWTPESARGFSEF 188
++P + Q + K+ + G P D V + NW AR
Sbjct: 238 LNLPPYLTQEARDLLKKLLKRNAASRL-GAGPGDAGEVQAHPFFRHINWEELLARKVEPP 296
Query: 189 LRPML 193
+P+L
Sbjct: 297 FKPLL 301
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 44/124 (35%)
Query: 89 CSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSE 148
AD+WS+ + + L +G P GDT ++ LA+I + D E
Sbjct: 197 LEADMWSIGVITYILLSGA---SPFLGDT---KQETLANITSVSYDF----------DEE 240
Query: 149 FFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQ 208
FF+ EL +F+R +L + + R T + L+
Sbjct: 241 FFSHTSELA----------------------------KDFIRKLLVKETRKRLTIQEALR 272
Query: 209 HPWL 212
HPW+
Sbjct: 273 HPWI 276
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 49/144 (34%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD--YLFEPHAGDTYTRDEDHLAHI 128
V T + + E++ Y DIWS+ M E+ G+ Y EP L +
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAM 356
Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
+ ++P R+ ++ H+ S P LK F
Sbjct: 357 KMIRDNLPPRL-KNLHKVS------------PSLK-----------------------GF 380
Query: 189 LRPMLAYDPKLRATAADCLQHPWL 212
L +L DP RATAA+ L+HP+L
Sbjct: 381 LDRLLVRDPAQRATAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 49/144 (34%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD--YLFEPHAGDTYTRDEDHLAHI 128
V T + + E++ Y DIWS+ M E+ G+ Y EP L +
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAM 279
Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
+ ++P R+ ++ H+ S P LK F
Sbjct: 280 KMIRDNLPPRL-KNLHKVS------------PSLK-----------------------GF 303
Query: 189 LRPMLAYDPKLRATAADCLQHPWL 212
L +L DP RATAA+ L+HP+L
Sbjct: 304 LDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 49/144 (34%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD--YLFEPHAGDTYTRDEDHLAHI 128
V T + + E++ Y DIWS+ M E+ G+ Y EP L +
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAM 234
Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
+ ++P R+ ++ H+ S P LK F
Sbjct: 235 KMIRDNLPPRL-KNLHKVS------------PSLK-----------------------GF 258
Query: 189 LRPMLAYDPKLRATAADCLQHPWL 212
L +L DP RATAA+ L+HP+L
Sbjct: 259 LDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 49/144 (34%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD--YLFEPHAGDTYTRDEDHLAHI 128
V T + + E++ Y DIWS+ M E+ G+ Y EP L +
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAM 225
Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
+ ++P R+ ++ H+ S P LK F
Sbjct: 226 KMIRDNLPPRL-KNLHKVS------------PSLK-----------------------GF 249
Query: 189 LRPMLAYDPKLRATAADCLQHPWL 212
L +L DP RATAA+ L+HP+L
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFL 273
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIE 130
V T QY S E+L S+D+W++ C+ ++L G F AG+ + A II+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGN----EGLIFAKIIK 248
Query: 131 LLGDIPKR 138
L D P++
Sbjct: 249 LEYDFPEK 256
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 49/144 (34%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD--YLFEPHAGDTYTRDEDHLAHI 128
V T + + E++ Y DIWS+ M E+ G+ Y EP L +
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAM 229
Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
+ ++P R+ ++ H+ S P LK F
Sbjct: 230 KMIRDNLPPRL-KNLHKVS------------PSLK-----------------------GF 253
Query: 189 LRPMLAYDPKLRATAADCLQHPWL 212
L +L DP RATAA+ L+HP+L
Sbjct: 254 LDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 49/144 (34%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD--YLFEPHAGDTYTRDEDHLAHI 128
V T + + E++ Y DIWS+ M E+ G+ Y EP L +
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAM 236
Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
+ ++P R+ ++ H+ S P LK F
Sbjct: 237 KMIRDNLPPRL-KNLHKVS------------PSLK-----------------------GF 260
Query: 189 LRPMLAYDPKLRATAADCLQHPWL 212
L +L DP RATAA+ L+HP+L
Sbjct: 261 LDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 29/128 (22%)
Query: 87 YDCSADIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRS 146
YD D+WS+ + + + +G F H G D + + + ++ +S
Sbjct: 203 YDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ------NKLFESIQEG 256
Query: 147 SEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADC 206
F K +W S+ + + +L D K R +AA
Sbjct: 257 KYEFPDK----------------------DWAHISSEA-KDLISKLLVRDAKQRLSAAQV 293
Query: 207 LQHPWLQN 214
LQHPW+Q
Sbjct: 294 LQHPWVQG 301
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 168 YSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
Y+ + ++ ESA+ + +R L Y P R +A D L H W+Q
Sbjct: 244 YTFELPQWKKVSESAK---DLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
TPE+ + + ML +P R TA++ L+HPW+
Sbjct: 234 TPEA----KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
TPE+ + + ML +P R TA++ L+HPW+
Sbjct: 234 TPEA----KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 53 DIGTYRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEP 112
D G + D T Y + E+L+ Y+ S D WS + +E+ G F
Sbjct: 161 DFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-- 218
Query: 113 HAGDTYTRDEDHLAHIIEL 131
+ +DE+ L H I +
Sbjct: 219 -----HGQDEEELFHSIRM 232
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ + +L D K R +AA LQHPW+Q
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWLQN 214
+ + +L D K R +AA LQHPW+Q
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWL 212
+F+R ++ DP+ R T LQHPW+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWL 212
+F+R ++ DP+ R T LQHPW+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 9/34 (26%), Positives = 23/34 (67%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + E++++ GY+ + D W++ + +++A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWL 212
+F+R ++ DP+ R T LQHPW+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
V T Y + EV+ N Y S D W++ C+ +E+ G F+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWL 212
+F+R ++ DP+ R T LQHPW+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFE 111
V T Y + EV+ N Y S D W++ C+ +E+ G F+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 64 DKHFTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
+KH+T T Y S E+ + + +D+WS+ CM + L G
Sbjct: 167 EKHYTL-CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 51 LFDIGTYRNACWVDKHFTED---VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD 107
+ D G R T+ + T QY S E D +D++S+ C+ +E+ TG+
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 108 YLFEPHAGDT 117
P GD+
Sbjct: 217 ---PPFTGDS 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 51 LFDIGTYRNACWVDKHFTED---VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD 107
+ D G R T+ + T QY S E D +D++S+ C+ +E+ TG+
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 108 YLFEPHAGDT 117
P GD+
Sbjct: 217 ---PPFTGDS 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 51 LFDIGTYRNACWVDKHFTED---VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD 107
+ D G R T+ + T QY S E D +D++S+ C+ +E+ TG+
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
Query: 108 YLFEPHAGDT 117
P GD+
Sbjct: 234 ---PPFTGDS 240
>pdb|1E5D|A Chain A, Rubredoxin Oxygen:oxidoreductase (Roo) From Anaerobe
Desulfovibrio Gigas
pdb|1E5D|B Chain B, Rubredoxin Oxygen:oxidoreductase (Roo) From Anaerobe
Desulfovibrio Gigas
Length = 402
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 124 HLAHIIELLGDIPKRIIQS-GHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESA 182
H + I+ + D I+ S H + G L++I GL+P + + W+ ES
Sbjct: 293 HHSQIMSEISDAGAVIVGSPTHNNGILPYVAGTLQYIKGLRPQNKIGGAFGSFGWSGEST 352
Query: 183 RGFSEFLRPM 192
+ +E+L M
Sbjct: 353 KVLAEWLTGM 362
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 51 LFDIGTYRNACWVDKHFTED---VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD 107
+ D G R T+ + T QY S E D +D++S+ C+ +E+ TG+
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 108 YLFEPHAGDT 117
P GD+
Sbjct: 217 ---PPFTGDS 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 51 LFDIGTYRNACWVDKHFTED---VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD 107
+ D G R T+ + T QY S E D +D++S+ C+ +E+ TG+
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 108 YLFEPHAGDT 117
P GD+
Sbjct: 217 ---PPFTGDS 223
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 57 YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCS-ADIWSVACMAFELATGDYLFE 111
Y A + V T Y + EVL+ YD AD+WS + + G Y FE
Sbjct: 163 YSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 44/123 (35%)
Query: 92 DIWSVACMAFELATGDYLFEPHAGDTYTRDEDHLAHIIELLGDIPKRIIQSGHRSSEFFT 151
D+WSV +A+ L +G P GD D + L +I+
Sbjct: 270 DMWSVGVIAYMLLSG---LSPFLGDN---DAETLNNILAC-------------------- 303
Query: 152 KKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPW 211
WDL E++ E A+ EF+ +L + R +A++ L+HPW
Sbjct: 304 ------------RWDLED---EEFQDISEEAK---EFISKLLIKEKSWRISASEALKHPW 345
Query: 212 LQN 214
L +
Sbjct: 346 LSD 348
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 54/145 (37%), Gaps = 49/145 (33%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGD--YLFEPHAGDTYTRDEDHLAHI 128
V T + + EV+ Y DIWS+ M E+ G+ Y EP L +
Sbjct: 202 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP-----------PLQAM 250
Query: 129 IELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEF 188
+ +P R ++ H+ S SVL RGF +
Sbjct: 251 RRIRDSLPPR-VKDLHKVS---------------------SVL-----------RGFLDL 277
Query: 189 LRPMLAYDPKLRATAADCLQHPWLQ 213
ML +P RATA + L HP+L+
Sbjct: 278 ---MLVREPSQRATAQELLGHPFLK 299
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHAGDT 117
+ T QY S E D +D++S+ C+ +E+ TG+ P GD+
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE---PPFTGDS 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 64 DKHFTED-VQTRQYRSLEVLINAGYDCSADIWSVACMAFEL 103
D+ F ++ V T Y S E + Y+ +DIWS+ C+ +EL
Sbjct: 169 DEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 172 VEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
VE TP++ + L+ ML DP+ R +AA L H W +
Sbjct: 246 VECRPLTPQAV----DLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 86 GYDCSADIWSVACMAFELATGDYLFE 111
GYD +DI+SV A ELA G F+
Sbjct: 197 GYDAKSDIYSVGITACELANGHVPFK 222
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 55/134 (41%), Gaps = 12/134 (8%)
Query: 71 VQTRQYRSLEVLINAGYDCS-ADIWSVACMAFELATGDYLFE-PHAGDTYTRDEDHLAHI 128
V T Y + EVL+ YD AD+WS + + G Y FE P Y + + I
Sbjct: 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKT---IQRI 234
Query: 129 IELLGDIPKRIIQSG---HRSSEFFTKKGELR-HIPGLK--PWDLYSVLVEKYNWTPESA 182
+ + IP I S H S F R IP +K W L ++ + N + +
Sbjct: 235 LSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNES-NTG 293
Query: 183 RGFSEFLRPMLAYD 196
F E +PM + D
Sbjct: 294 SQFQEPEQPMQSLD 307
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T +Y + ++++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 86 GYDCSADIWSVACMAFELATGDYLFE 111
GYD +DI+SV A ELA G F+
Sbjct: 213 GYDAKSDIYSVGITACELANGHVPFK 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 188 FLRPMLAYDPKLRATAADCLQHPWL 212
L+ ML DPK R + + L HPW+
Sbjct: 240 LLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 57 YRNACWVDKHFTEDVQTRQYRSLEVLINAGYDCS-ADIWSVACMAFELATGDYLFE 111
Y + + + V T Y + EVL+ YD AD+WS + + G Y FE
Sbjct: 163 YSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/27 (29%), Positives = 19/27 (70%)
Query: 80 EVLINAGYDCSADIWSVACMAFELATG 106
E++++ GY+ + D W++ + +E+A G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFEL 103
V T Y S E + Y+ +DIWS+ C+ +EL
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 71 VQTRQYRSLEVLINAGYDCSADIWSVACMAFEL 103
V T Y S E + Y+ +DIWS+ C+ +EL
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 71 VQTRQYRSLEVLINAGYDCS-ADIWSVACMAFELATGDYLFE 111
V T Y + EVL+ YD AD+WS + + G Y FE
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 71 VQTRQYRSLEVLINAGYDCS-ADIWSVACMAFELATGDYLFE 111
V T Y + EVL+ YD AD+WS + + G Y FE
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
TPE+ + ML +P R TA + L+HPW+
Sbjct: 234 TPEA----KNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 87 YDCSADIWSVACMAFELATGDYLFE 111
YD AD+WS+ ELATG + ++
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYK 230
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 66 HFTEDVQTRQYRSLEVLINAG----YDCSADIWSVACMAFELATGDYLFEPHA-GDTYTR 120
H V T Y S EVL + G Y D WSV FE+ GD F + TY++
Sbjct: 231 HCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK 290
Query: 121 DEDH 124
DH
Sbjct: 291 IMDH 294
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 71 VQTRQYRSLEVLINAGYDCS-ADIWSVACMAFELATGDYLFE 111
V T Y + EVL+ YD AD+WS + + G Y FE
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 178 TPESARGFSEFLRPMLAYDPKLRATAADCLQHPWL 212
TPE+ + ML +P R TA L+HPW+
Sbjct: 261 TPEA----KNLINQMLTINPAKRITADQALKHPWV 291
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWL 212
+FL+ L +P R T+ D L+H WL
Sbjct: 301 DFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 179 PESARGFSEFLRP----MLAYDPKLRATAADCLQHPWLQN 214
PE G S LR ML DPKLRATA L P L+
Sbjct: 271 PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
L+ W+ E F +FL+ L +P+ R +AA L+HP++ +
Sbjct: 242 LLTPSKWSVE----FRDFLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 171 LVEKYNWTPESARGFSEFLRPMLAYDPKLRATAADCLQHPWLQN 214
L+ W+ E F +FL+ L +P+ R +AA L+HP++ +
Sbjct: 234 LLTPSKWSVE----FRDFLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 67 FTEDVQTRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
TE T Y + EVL YD S D+WS+ + + L G
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3TCQ|A Chain A, Crystal Structure Of Matrix Protein Vp40 From Ebola Virus
Sudan
Length = 326
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 176 NWTPESARGFSEFLRPMLAYDPKLR 200
WT E+ S LRP L++ PKLR
Sbjct: 190 TWTDETPSNLSGALRPGLSFHPKLR 214
>pdb|1VCH|A Chain A, Crystal Structure Of A Phosphoribosyltransferase-Related
Protein From Thermus Thermophilus
pdb|1VCH|B Chain B, Crystal Structure Of A Phosphoribosyltransferase-Related
Protein From Thermus Thermophilus
pdb|1VCH|C Chain C, Crystal Structure Of A Phosphoribosyltransferase-Related
Protein From Thermus Thermophilus
pdb|1VCH|D Chain D, Crystal Structure Of A Phosphoribosyltransferase-Related
Protein From Thermus Thermophilus
pdb|1VCH|E Chain E, Crystal Structure Of A Phosphoribosyltransferase-Related
Protein From Thermus Thermophilus
Length = 175
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 150 FTKKGELRHIPGLKPWDLYSVLVEKYNWTPESARGFSEFLRPMLAYD 196
T G RH+P ++P + + ++ PE R +E LRP++ +
Sbjct: 6 ITVGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLVPKE 52
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T + + EV++ D D+WS CM + G
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T + + EV++ D D+WS CM + G
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 87 YDCSADIWSVACMAFELATGDYLFEPHAG 115
Y + D+WS+ + ATG F P G
Sbjct: 200 YGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 187 EFLRPMLAYDPKLRATAADCLQHPWL 212
+F+R ++ DP R T +HPW+
Sbjct: 255 DFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T + + EV++ D DIWS CM + G
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T + + EV++ D DIWS CM + G
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATG 106
T + + EV++ D DIWS CM + G
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 87 YDCSADIWSVACMAFELATGDYLFEPHAG 115
Y + D+WS+ + ATG F P G
Sbjct: 200 YGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|2PE3|A Chain A, Crystal Structure Of Frv Operon Protein Frvx (Ph1821)from
Pyrococcus Horikoshii Ot3
pdb|2PE3|B Chain B, Crystal Structure Of Frv Operon Protein Frvx (Ph1821)from
Pyrococcus Horikoshii Ot3
pdb|2PE3|C Chain C, Crystal Structure Of Frv Operon Protein Frvx (Ph1821)from
Pyrococcus Horikoshii Ot3
pdb|2PE3|D Chain D, Crystal Structure Of Frv Operon Protein Frvx (Ph1821)from
Pyrococcus Horikoshii Ot3
Length = 354
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 121 DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
D+D HI+ + G +P+ ++ R FFT+KGE + G+ P L
Sbjct: 83 DKDGYLHIVPIGGVLPETLVAQRIR---FFTEKGERYGVVGVLPPHL 126
>pdb|2WZN|A Chain A, 3d Structure Of Tet3 From Pyrococcus Horikoshii
Length = 354
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 121 DEDHLAHIIELLGDIPKRIIQSGHRSSEFFTKKGELRHIPGLKPWDL 167
D+D HI+ + G +P+ ++ R FFT+KGE + G+ P L
Sbjct: 83 DKDGYLHIVPIGGVLPETLVAQRIR---FFTEKGERYGVVGVLPPHL 126
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTR 120
T Y E++ +D D+WS+ + +E G FE H +TY R
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRR 221
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 73 TRQYRSLEVLINAGYDCSADIWSVACMAFELATGDYLFEPHA-GDTYTR 120
T Y E++ +D D+WS+ + +E G FE H +TY R
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRR 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 161 GLKPWD------LYSVLVEKYNWTPESAR-GFSEFLRPMLAYDPKLRATAADCLQHPWLQ 213
G P+D L+ + + +TP+ L+ ML DP RAT D +H W +
Sbjct: 212 GTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271
Query: 214 N 214
Sbjct: 272 Q 272
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,809,509
Number of Sequences: 62578
Number of extensions: 281439
Number of successful extensions: 1831
Number of sequences better than 100.0: 482
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1091
Number of HSP's gapped (non-prelim): 581
length of query: 214
length of database: 14,973,337
effective HSP length: 95
effective length of query: 119
effective length of database: 9,028,427
effective search space: 1074382813
effective search space used: 1074382813
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 49 (23.5 bits)